**************************************************************************************************************************************************************************************************** MOTIFSIM - Motif Similarity Detection Tool Version 1.0 **************************************************************************************************************************************************************************************************** Please, consult user manual for using this tool. **************************************************************************************************************************************************************************************************** INPUT **************************************************************************************************************************************************************************************************** Number of files: 5 Number of best matches: 10 Similarity cutoff: >= 0.75 Number of threads: 1 Input Files and Motif Counts File Name File Type Count of Motifs Dataset # MEME_DM05.txt MEME output 46 1 MEME-CHIP_DM05.txt MEME output 4 2 PScanChIP_DM05.txt Jaspar 16 3 RSAT_peak-motifs_DM05.txt TRANSFAC-like 17 4 W-ChIPMotifs_DM05.txt PSSM 11 5 **************************************************************************************************************************************************************************************************** RESULTS **************************************************************************************************************************************************************************************************** ****************************************************************** Top 10 Significant Motifs - Global Matching (Highest to Lowest) ****************************************************************** Dataset # 5 Motif ID 84 Motif Name TFW3 Original Motif 0.117363 0.130225 0.654341 0.0980707 0.0707395 0.92926 0 0 0.779743 0.104502 0 0.115756 0 0.916399 0.0836013 0 0.12701 0 0 0.87299 0 0 1 0 Reverse Complement Motif 0 1 0 0 0.87299 0 0 0.12701 0 0.0836013 0.916399 0 0.115756 0.104502 0 0.779743 0.0707395 0 0.92926 0 0.117363 0.654341 0.130225 0.0980707 *************************************************************** Best Matches for Top Significant Motif ID 84 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 67 TgTGgTGTCACAGTGCTCC Reverse Complement Original Motif Backward 11 6 0 Original Motif 0.111111 0.0833333 0.0555556 0.75 0.125 0.0972222 0.652778 0.125 0.0416667 0.0972222 0.0277778 0.833333 0.0277778 0.0277778 0.791667 0.152778 0.0555556 0.166667 0.652778 0.125 0 0.0416667 0.0138889 0.944444 0.0416667 0 0.888889 0.0694444 0.0277778 0.0277778 0 0.944444 0.0416667 0.944444 0.0138889 0 0.916667 0.0277778 0 0.0555556 0.0694444 0.875 0 0.0555556 0.833333 0.0138889 0.0138889 0.138889 0.0416667 0.0694444 0.819444 0.0694444 0.0277778 0.0277778 0.0277778 0.916667 0.0694444 0.0138889 0.847222 0.0694444 0.0694444 0.777778 0.0277778 0.125 0.0555556 0.0416667 0.0277778 0.875 0.0416667 0.708333 0.125 0.125 0.111111 0.819444 0.0555556 0.0138889 Reverse Complement Motif 0.111111 0.0555556 0.819444 0.0138889 0.0416667 0.125 0.708333 0.125 0.875 0.0416667 0.0277778 0.0555556 0.0694444 0.0277778 0.777778 0.125 0.0694444 0.847222 0.0138889 0.0694444 0.916667 0.0277778 0.0277778 0.0277778 0.0416667 0.819444 0.0694444 0.0694444 0.138889 0.0138889 0.0138889 0.833333 0.0694444 0 0.875 0.0555556 0.0555556 0.0277778 0 0.916667 0.0416667 0.0138889 0.944444 0 0.944444 0.0277778 0 0.0277778 0.0416667 0.888889 0 0.0694444 0.944444 0.0416667 0.0138889 0 0.0555556 0.652778 0.166667 0.125 0.0277778 0.791667 0.0277778 0.152778 0.833333 0.0972222 0.0277778 0.0416667 0.125 0.652778 0.0972222 0.125 0.75 0.0833333 0.0555556 0.111111 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 72 CACTGTGrYrtCACAGTGswsCAcT Reverse Complement Original Motif Backward 14 6 0.000794289 Original Motif 0.111111 0.746032 0.0634921 0.0793651 0.857143 0.047619 0.047619 0.047619 0.047619 0.857143 0.0793651 0.015873 0.031746 0 0 0.968254 0.031746 0.015873 0.904762 0.047619 0 0 0 1 0.031746 0 0.857143 0.111111 0.396825 0.111111 0.412698 0.0793651 0.031746 0.253968 0.015873 0.698413 0.365079 0 0.634921 0 0.0793651 0.206349 0.047619 0.666667 0.047619 0.936508 0.015873 0 0.952381 0 0.015873 0.031746 0.015873 0.920635 0 0.0634921 0.920635 0 0 0.0793651 0.0634921 0.047619 0.84127 0.047619 0 0 0.015873 0.984127 0.047619 0.015873 0.904762 0.031746 0.015873 0.603175 0.31746 0.0634921 0.396825 0 0.015873 0.587302 0.015873 0.47619 0.428571 0.0793651 0.0634921 0.920635 0 0.015873 0.920635 0.015873 0.047619 0.015873 0.0952381 0.68254 0.0952381 0.126984 0.047619 0.015873 0.0952381 0.84127 Reverse Complement Motif 0.84127 0.015873 0.0952381 0.047619 0.0952381 0.0952381 0.68254 0.126984 0.015873 0.015873 0.047619 0.920635 0.0634921 0 0.920635 0.015873 0.015873 0.428571 0.47619 0.0793651 0.587302 0 0.015873 0.396825 0.015873 0.31746 0.603175 0.0634921 0.047619 0.904762 0.015873 0.031746 0.984127 0 0.015873 0 0.0634921 0.84127 0.047619 0.047619 0.0793651 0 0 0.920635 0.015873 0 0.920635 0.0634921 0.031746 0 0.015873 0.952381 0.047619 0.015873 0.936508 0 0.666667 0.206349 0.047619 0.0793651 0.365079 0.634921 0 0 0.698413 0.253968 0.015873 0.031746 0.396825 0.412698 0.111111 0.0793651 0.031746 0.857143 0 0.111111 1 0 0 0 0.031746 0.904762 0.015873 0.047619 0.968254 0 0 0.031746 0.047619 0.0793651 0.857143 0.015873 0.047619 0.047619 0.047619 0.857143 0.111111 0.0634921 0.746032 0.0793651 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 73 TGGAGCACTGTGACAcCACAGTGg Reverse Complement Reverse Complement Backward 5 6 0.00482436 Original Motif 0.0540541 0.0405405 0.0540541 0.851351 0.0405405 0.0135135 0.824324 0.121622 0.0945946 0.135135 0.756757 0.0135135 0.891892 0 0 0.108108 0.0405405 0.0945946 0.810811 0.0540541 0.0810811 0.797297 0.0540541 0.0675676 0.932432 0.027027 0 0.0405405 0.0540541 0.756757 0.135135 0.0540541 0.108108 0.027027 0.0135135 0.851351 0.108108 0 0.851351 0.0405405 0.0135135 0 0.027027 0.959459 0 0.0135135 0.945946 0.0405405 0.905405 0 0.0675676 0.027027 0.0540541 0.837838 0 0.108108 0.945946 0.0135135 0.0405405 0 0.162162 0.5 0.189189 0.148649 0.108108 0.824324 0 0.0675676 0.945946 0 0.0405405 0.0135135 0.0810811 0.837838 0.027027 0.0540541 0.945946 0 0.0135135 0.0405405 0.0540541 0.0675676 0.783784 0.0945946 0.0540541 0.027027 0 0.918919 0.0405405 0.0135135 0.864865 0.0810811 0.148649 0.121622 0.675676 0.0540541 Reverse Complement Motif 0.148649 0.675676 0.121622 0.0540541 0.0405405 0.864865 0.0135135 0.0810811 0.918919 0.027027 0 0.0540541 0.0540541 0.783784 0.0675676 0.0945946 0.0405405 0 0.0135135 0.945946 0.0810811 0.027027 0.837838 0.0540541 0.0135135 0 0.0405405 0.945946 0.108108 0 0.824324 0.0675676 0.162162 0.189189 0.5 0.148649 0 0.0135135 0.0405405 0.945946 0.0540541 0 0.837838 0.108108 0.027027 0 0.0675676 0.905405 0 0.945946 0.0135135 0.0405405 0.959459 0 0.027027 0.0135135 0.108108 0.851351 0 0.0405405 0.851351 0.027027 0.0135135 0.108108 0.0540541 0.135135 0.756757 0.0540541 0.0405405 0.027027 0 0.932432 0.0810811 0.0540541 0.797297 0.0675676 0.0405405 0.810811 0.0945946 0.0540541 0.108108 0 0 0.891892 0.0945946 0.756757 0.135135 0.0135135 0.0405405 0.824324 0.0135135 0.121622 0.851351 0.0405405 0.0540541 0.0540541 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 76 CAcCACAGTGGAGCAct Reverse Complement Original Motif Forward 7 6 0.0201914 Original Motif 0.078125 0.734375 0.046875 0.140625 0.828125 0.046875 0.078125 0.046875 0.203125 0.484375 0.15625 0.15625 0.015625 0.984375 0 0 0.96875 0.015625 0.015625 0 0 0.90625 0.015625 0.078125 0.859375 0 0 0.140625 0.03125 0 0.90625 0.0625 0 0.015625 0 0.984375 0 0 0.96875 0.03125 0.046875 0.0625 0.8125 0.078125 0.9375 0.015625 0.015625 0.03125 0.015625 0.03125 0.921875 0.03125 0.125 0.796875 0 0.078125 0.875 0.046875 0.046875 0.03125 0.09375 0.65625 0.09375 0.15625 0.15625 0.078125 0.109375 0.65625 Reverse Complement Motif 0.65625 0.078125 0.109375 0.15625 0.09375 0.09375 0.65625 0.15625 0.03125 0.046875 0.046875 0.875 0.125 0 0.796875 0.078125 0.015625 0.921875 0.03125 0.03125 0.03125 0.015625 0.015625 0.9375 0.046875 0.8125 0.0625 0.078125 0 0.96875 0 0.03125 0.984375 0.015625 0 0 0.03125 0.90625 0 0.0625 0.140625 0 0 0.859375 0 0.015625 0.90625 0.078125 0 0.015625 0.015625 0.96875 0.015625 0 0.984375 0 0.203125 0.15625 0.484375 0.15625 0.046875 0.046875 0.078125 0.828125 0.078125 0.046875 0.734375 0.140625 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 70 CagTGCTCCACTGTGgT Reverse Complement Reverse Complement Backward 8 6 0.0205497 Original Motif 0.15 0.7 0.0166667 0.133333 0.65 0.15 0.05 0.15 0.166667 0.116667 0.633333 0.0833333 0.05 0.0333333 0.0666667 0.85 0.05 0 0.833333 0.116667 0.0166667 0.966667 0 0.0166667 0.05 0.0166667 0 0.933333 0.0666667 0.833333 0.0666667 0.0333333 0.0333333 0.966667 0 0 1 0 0 0 0.05 0.916667 0.0166667 0.0166667 0.166667 0 0 0.833333 0.0833333 0.0166667 0.9 0 0 0.0166667 0.0166667 0.966667 0 0.0166667 0.966667 0.0166667 0.116667 0.166667 0.483333 0.233333 0.0666667 0.0833333 0.05 0.8 Reverse Complement Motif 0.8 0.0833333 0.05 0.0666667 0.116667 0.483333 0.166667 0.233333 0 0.966667 0.0166667 0.0166667 0.966667 0.0166667 0.0166667 0 0.0833333 0.9 0.0166667 0 0.833333 0 0 0.166667 0.05 0.0166667 0.916667 0.0166667 0 0 0 1 0.0333333 0 0.966667 0 0.0666667 0.0666667 0.833333 0.0333333 0.933333 0.0166667 0 0.05 0.0166667 0 0.966667 0.0166667 0.05 0.833333 0 0.116667 0.85 0.0333333 0.0666667 0.05 0.166667 0.633333 0.116667 0.0833333 0.15 0.15 0.05 0.65 0.15 0.0166667 0.7 0.133333 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 77 AgTGCTCCACTGTGgTGTCACAgT Reverse Complement Reverse Complement Backward 7 6 0.0290883 Original Motif 0.690141 0.126761 0.0422535 0.140845 0.169014 0.0985915 0.676056 0.056338 0.0422535 0.028169 0.028169 0.901408 0.056338 0 0.774648 0.169014 0.0422535 0.887324 0.0422535 0.028169 0 0.0140845 0 0.985915 0.056338 0.830986 0.0422535 0.0704225 0.028169 0.957746 0.0140845 0 0.957746 0 0.0140845 0.028169 0.084507 0.84507 0.0140845 0.056338 0.028169 0.0140845 0 0.957746 0.140845 0.028169 0.802817 0.028169 0.0140845 0.0140845 0.0140845 0.957746 0.0140845 0 0.929577 0.056338 0.056338 0.15493 0.619718 0.169014 0.0140845 0.028169 0 0.957746 0.056338 0.0140845 0.873239 0.056338 0.0140845 0 0 0.985915 0.0422535 0.929577 0 0.028169 0.957746 0.028169 0 0.0140845 0.028169 0.84507 0.028169 0.0985915 0.873239 0.0140845 0.0422535 0.0704225 0.0985915 0.15493 0.56338 0.183099 0.0704225 0.0140845 0.112676 0.802817 Reverse Complement Motif 0.802817 0.0140845 0.112676 0.0704225 0.0985915 0.56338 0.15493 0.183099 0.0704225 0.0140845 0.0422535 0.873239 0.028169 0.028169 0.84507 0.0985915 0.0140845 0.028169 0 0.957746 0.0422535 0 0.929577 0.028169 0.985915 0 0 0.0140845 0.056338 0.873239 0.0140845 0.056338 0.957746 0.028169 0 0.0140845 0.056338 0.619718 0.15493 0.169014 0.0140845 0.929577 0 0.056338 0.957746 0.0140845 0.0140845 0.0140845 0.140845 0.802817 0.028169 0.028169 0.957746 0.0140845 0 0.028169 0.084507 0.0140845 0.84507 0.056338 0.028169 0 0.0140845 0.957746 0.028169 0.0140845 0.957746 0 0.056338 0.0422535 0.830986 0.0704225 0.985915 0.0140845 0 0 0.0422535 0.0422535 0.887324 0.028169 0.056338 0.774648 0 0.169014 0.901408 0.028169 0.028169 0.0422535 0.169014 0.676056 0.0985915 0.056338 0.140845 0.126761 0.0422535 0.690141 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 57 REST Reverse Complement Original Motif Backward 15 6 0.039883 Original Motif 0.132621 0.109365 0.230044 0.52797 0.0363181 0.168441 0.0914214 0.70382 0.0475892 0.855354 0.0313087 0.0657483 0.906367 0.0187266 0.0586767 0.0162297 0.021197 0.0274314 0.945137 0.00623441 0.0760125 0.609346 0.201246 0.113396 0.980697 0.00435866 0.00747198 0.00747198 0.001868 0.987547 0.00747198 0.00311333 0.0217933 0.922167 0.0124533 0.0435866 0.568847 0.125234 0.100935 0.204984 0.136534 0.233791 0.0773067 0.552369 0.0243142 0.00436409 0.966958 0.00436409 0.0124688 0.00311721 0.983167 0.00124688 0.877105 0.069869 0.0212102 0.0318153 0.008125 0.8 0.145625 0.04625 0.98375 0.005625 0.004375 0.00625 0.0263488 0.00815558 0.959849 0.00564617 0.128688 0.632141 0.114878 0.124294 0.229899 0.0194724 0.432161 0.318467 0.133962 0.586792 0.200629 0.0786164 0.112579 0.700629 0.0232704 0.163522 Reverse Complement Motif 0.112579 0.0232704 0.700629 0.163522 0.133962 0.200629 0.586792 0.0786164 0.229899 0.432161 0.0194724 0.318467 0.128688 0.114878 0.632141 0.124294 0.0263488 0.959849 0.00815558 0.00564617 0.00625 0.005625 0.004375 0.98375 0.008125 0.145625 0.8 0.04625 0.0318153 0.069869 0.0212102 0.877105 0.0124688 0.983167 0.00311721 0.00124688 0.0243142 0.966958 0.00436409 0.00436409 0.552369 0.233791 0.0773067 0.136534 0.204984 0.125234 0.100935 0.568847 0.0217933 0.0124533 0.922167 0.0435866 0.001868 0.00747198 0.987547 0.00311333 0.00747198 0.00435866 0.00747198 0.980697 0.0760125 0.201246 0.609346 0.113396 0.021197 0.945137 0.0274314 0.00623441 0.0162297 0.0187266 0.0586767 0.906367 0.0475892 0.0313087 0.855354 0.0657483 0.70382 0.168441 0.0914214 0.0363181 0.52797 0.109365 0.230044 0.132621 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 65 Tcfcp2l1 Reverse Complement Original Motif Backward 2 6 0.0447224 Original Motif 0.00196754 0.92548 0.0627152 0.00983768 0.069973 0.807513 0.00540142 0.117113 0.594508 0.00514832 0.275803 0.12454 0.0058838 0.0237803 0.967149 0.00318706 0.175477 0.33627 0.0256975 0.462555 0.0983847 0.28928 0.0621635 0.550171 0.173924 0.39726 0.151174 0.277642 0.357213 0.224939 0.252323 0.165526 0.63154 0.0696822 0.190954 0.107824 0.394421 0.0513824 0.310497 0.2437 0.00366928 0.933219 0.0547945 0.00831703 0.0617193 0.812148 0.00293902 0.123194 0.536555 0.00736016 0.305937 0.150147 0.0120393 0.0289926 0.954791 0.0041769 Reverse Complement Motif 0.0120393 0.954791 0.0289926 0.0041769 0.150147 0.00736016 0.305937 0.536555 0.0617193 0.00293902 0.812148 0.123194 0.00366928 0.0547945 0.933219 0.00831703 0.2437 0.0513824 0.310497 0.394421 0.107824 0.0696822 0.190954 0.63154 0.165526 0.224939 0.252323 0.357213 0.173924 0.151174 0.39726 0.277642 0.550171 0.28928 0.0621635 0.0983847 0.462555 0.33627 0.0256975 0.175477 0.0058838 0.967149 0.0237803 0.00318706 0.12454 0.00514832 0.275803 0.594508 0.069973 0.00540142 0.807513 0.117113 0.00196754 0.0627152 0.92548 0.00983768 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 5 Motif 5 Reverse Complement Original Motif Forward 9 6 0.0459818 Original Motif 0 0.8125 0.125 0.0625 0.375 0 0 0.625 0.0625 0 0.9375 0 0.5625 0.125 0.1875 0.125 0 0 1 0 0.0625 0.9375 0 0 0 0.9375 0.0625 0 1 0 0 0 0 0.625 0 0.375 0 0.9375 0.0625 0 0 0 0 1 0 0.5625 0 0.4375 0 0.125 0.125 0.75 0.0625 0.625 0 0.3125 Reverse Complement Motif 0.0625 0 0.625 0.3125 0.75 0.125 0.125 0 0 0 0.5625 0.4375 1 0 0 0 0 0.0625 0.9375 0 0 0 0.625 0.375 0 0 0 1 0 0.0625 0.9375 0 0.0625 0 0.9375 0 0 1 0 0 0.125 0.125 0.1875 0.5625 0.0625 0.9375 0 0 0.625 0 0 0.375 0 0.125 0.8125 0.0625 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 75 wwCCAmAGTCmt Reverse Complement Original Motif Backward 6 6 0.0587933 Original Motif 0.454545 0.0454545 0.227273 0.272727 0.363636 0.136364 0.136364 0.363636 0 1 0 0 0 0.954545 0.0454545 0 1 0 0 0 0.409091 0.590909 0 0 0.909091 0.0454545 0.0454545 0 0 0 1 0 0.0454545 0 0 0.954545 0.0454545 0.909091 0 0.0454545 0.272727 0.318182 0.181818 0.227273 0.181818 0.227273 0.227273 0.363636 Reverse Complement Motif 0.363636 0.227273 0.227273 0.181818 0.272727 0.181818 0.318182 0.227273 0.0454545 0 0.909091 0.0454545 0.954545 0 0 0.0454545 0 1 0 0 0 0.0454545 0.0454545 0.909091 0.409091 0 0.590909 0 0 0 0 1 0 0.0454545 0.954545 0 0 0 1 0 0.363636 0.136364 0.136364 0.363636 0.272727 0.0454545 0.227273 0.454545 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # 5 Motif ID 85 Motif Name TFW1 Original Motif 0 0 0.025 0.975 0 0 0 1 0.1 0.025 0.825 0.05 0.15 0.625 0.05 0.175 0.175 0.05 0.625 0.15 0.05 0.825 0.025 0.1 1 0 0 0 0.975 0.025 0 0 Reverse Complement Motif 0 0.025 0 0.975 0 0 0 1 0.05 0.025 0.825 0.1 0.175 0.625 0.05 0.15 0.15 0.05 0.625 0.175 0.1 0.825 0.025 0.05 1 0 0 0 0.975 0 0.025 0 *************************************************************** Best Matches for Top Significant Motif ID 85 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 21 Motif 21 Original Motif Reverse Complement Forward 5 8 0.0195312 Original Motif 0 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 0.5 0.5 0 0 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 0 0.5 0 0.5 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 52 NR2F1 Reverse Complement Reverse Complement Backward 7 8 0.0276442 Original Motif 0 0 0.153846 0.846154 0.0769231 0 0.923077 0 0.923077 0 0.0769231 0 0.461538 0.538462 0 0 0 1 0 0 0 0.230769 0 0.769231 0 0.153846 0 0.846154 0.0769231 0 0 0.923077 0.153846 0 0.846154 0 0.461538 0.307692 0.230769 0 0.461538 0.384615 0.0769231 0.0769231 0.0769231 0.769231 0.0769231 0.0769231 0.230769 0.461538 0 0.307692 0 0.230769 0.230769 0.538462 Reverse Complement Motif 0.538462 0.230769 0.230769 0 0.230769 0 0.461538 0.307692 0.0769231 0.0769231 0.769231 0.0769231 0.0769231 0.384615 0.0769231 0.461538 0 0.307692 0.230769 0.461538 0.153846 0.846154 0 0 0.923077 0 0 0.0769231 0.846154 0.153846 0 0 0.769231 0.230769 0 0 0 0 1 0 0.461538 0 0.538462 0 0 0 0.0769231 0.923077 0.0769231 0.923077 0 0 0.846154 0 0.153846 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 64 PPARGRXRA Original Motif Reverse Complement Forward 2 8 0.0277567 Original Motif 0.109685 0.369895 0.373396 0.147025 0.117716 0.193473 0.148019 0.540793 0.453488 0.0267442 0.427907 0.0918605 0.116144 0.00348432 0.779326 0.101045 0.161253 0.0174014 0.781903 0.0394432 0.168213 0.149652 0.458237 0.223898 0.0822711 0.633835 0.207416 0.0764774 0.949015 0.0243337 0.0173812 0.00926999 0.604867 0.0556199 0.312862 0.0266512 0.825231 0.00578704 0.158565 0.0104167 0.0950174 0.0023175 0.88876 0.013905 0.0475087 0.0104287 0.803013 0.13905 0.0254925 0.114716 0.304751 0.555041 0.062645 0.643852 0.167053 0.12645 0.784223 0.0672854 0.0545244 0.0939675 Reverse Complement Motif 0.0939675 0.0672854 0.0545244 0.784223 0.062645 0.167053 0.643852 0.12645 0.555041 0.114716 0.304751 0.0254925 0.0475087 0.803013 0.0104287 0.13905 0.0950174 0.88876 0.0023175 0.013905 0.0104167 0.00578704 0.158565 0.825231 0.0266512 0.0556199 0.312862 0.604867 0.00926999 0.0243337 0.0173812 0.949015 0.0822711 0.207416 0.633835 0.0764774 0.168213 0.458237 0.149652 0.223898 0.161253 0.781903 0.0174014 0.0394432 0.116144 0.779326 0.00348432 0.101045 0.0918605 0.0267442 0.427907 0.453488 0.540793 0.193473 0.148019 0.117716 0.109685 0.373396 0.369895 0.147025 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 28 Motif 28 Original Motif Reverse Complement Backward 2 8 0.0328125 Original Motif 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 76 CAcCACAGTGGAGCAct Reverse Complement Original Motif Forward 2 8 0.0336914 Original Motif 0.078125 0.734375 0.046875 0.140625 0.828125 0.046875 0.078125 0.046875 0.203125 0.484375 0.15625 0.15625 0.015625 0.984375 0 0 0.96875 0.015625 0.015625 0 0 0.90625 0.015625 0.078125 0.859375 0 0 0.140625 0.03125 0 0.90625 0.0625 0 0.015625 0 0.984375 0 0 0.96875 0.03125 0.046875 0.0625 0.8125 0.078125 0.9375 0.015625 0.015625 0.03125 0.015625 0.03125 0.921875 0.03125 0.125 0.796875 0 0.078125 0.875 0.046875 0.046875 0.03125 0.09375 0.65625 0.09375 0.15625 0.15625 0.078125 0.109375 0.65625 Reverse Complement Motif 0.65625 0.078125 0.109375 0.15625 0.09375 0.09375 0.65625 0.15625 0.03125 0.046875 0.046875 0.875 0.125 0 0.796875 0.078125 0.015625 0.921875 0.03125 0.03125 0.03125 0.015625 0.015625 0.9375 0.046875 0.8125 0.0625 0.078125 0 0.96875 0 0.03125 0.984375 0.015625 0 0 0.03125 0.90625 0 0.0625 0.140625 0 0 0.859375 0 0.015625 0.90625 0.078125 0 0.015625 0.015625 0.96875 0.015625 0 0.984375 0 0.203125 0.15625 0.484375 0.15625 0.046875 0.046875 0.078125 0.828125 0.078125 0.046875 0.734375 0.140625 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 73 TGGAGCACTGTGACAcCACAGTGg Original Motif Original Motif Backward 17 8 0.0338471 Original Motif 0.0540541 0.0405405 0.0540541 0.851351 0.0405405 0.0135135 0.824324 0.121622 0.0945946 0.135135 0.756757 0.0135135 0.891892 0 0 0.108108 0.0405405 0.0945946 0.810811 0.0540541 0.0810811 0.797297 0.0540541 0.0675676 0.932432 0.027027 0 0.0405405 0.0540541 0.756757 0.135135 0.0540541 0.108108 0.027027 0.0135135 0.851351 0.108108 0 0.851351 0.0405405 0.0135135 0 0.027027 0.959459 0 0.0135135 0.945946 0.0405405 0.905405 0 0.0675676 0.027027 0.0540541 0.837838 0 0.108108 0.945946 0.0135135 0.0405405 0 0.162162 0.5 0.189189 0.148649 0.108108 0.824324 0 0.0675676 0.945946 0 0.0405405 0.0135135 0.0810811 0.837838 0.027027 0.0540541 0.945946 0 0.0135135 0.0405405 0.0540541 0.0675676 0.783784 0.0945946 0.0540541 0.027027 0 0.918919 0.0405405 0.0135135 0.864865 0.0810811 0.148649 0.121622 0.675676 0.0540541 Reverse Complement Motif 0.148649 0.675676 0.121622 0.0540541 0.0405405 0.864865 0.0135135 0.0810811 0.918919 0.027027 0 0.0540541 0.0540541 0.783784 0.0675676 0.0945946 0.0405405 0 0.0135135 0.945946 0.0810811 0.027027 0.837838 0.0540541 0.0135135 0 0.0405405 0.945946 0.108108 0 0.824324 0.0675676 0.162162 0.189189 0.5 0.148649 0 0.0135135 0.0405405 0.945946 0.0540541 0 0.837838 0.108108 0.027027 0 0.0675676 0.905405 0 0.945946 0.0135135 0.0405405 0.959459 0 0.027027 0.0135135 0.108108 0.851351 0 0.0405405 0.851351 0.027027 0.0135135 0.108108 0.0540541 0.135135 0.756757 0.0540541 0.0405405 0.027027 0 0.932432 0.0810811 0.0540541 0.797297 0.0675676 0.0405405 0.810811 0.0945946 0.0540541 0.108108 0 0 0.891892 0.0945946 0.756757 0.135135 0.0135135 0.0405405 0.824324 0.0135135 0.121622 0.851351 0.0405405 0.0540541 0.0540541 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 77 AgTGCTCCACTGTGgTGTCACAgT Reverse Complement Original Motif Backward 2 8 0.034375 Original Motif 0.690141 0.126761 0.0422535 0.140845 0.169014 0.0985915 0.676056 0.056338 0.0422535 0.028169 0.028169 0.901408 0.056338 0 0.774648 0.169014 0.0422535 0.887324 0.0422535 0.028169 0 0.0140845 0 0.985915 0.056338 0.830986 0.0422535 0.0704225 0.028169 0.957746 0.0140845 0 0.957746 0 0.0140845 0.028169 0.084507 0.84507 0.0140845 0.056338 0.028169 0.0140845 0 0.957746 0.140845 0.028169 0.802817 0.028169 0.0140845 0.0140845 0.0140845 0.957746 0.0140845 0 0.929577 0.056338 0.056338 0.15493 0.619718 0.169014 0.0140845 0.028169 0 0.957746 0.056338 0.0140845 0.873239 0.056338 0.0140845 0 0 0.985915 0.0422535 0.929577 0 0.028169 0.957746 0.028169 0 0.0140845 0.028169 0.84507 0.028169 0.0985915 0.873239 0.0140845 0.0422535 0.0704225 0.0985915 0.15493 0.56338 0.183099 0.0704225 0.0140845 0.112676 0.802817 Reverse Complement Motif 0.802817 0.0140845 0.112676 0.0704225 0.0985915 0.56338 0.15493 0.183099 0.0704225 0.0140845 0.0422535 0.873239 0.028169 0.028169 0.84507 0.0985915 0.0140845 0.028169 0 0.957746 0.0422535 0 0.929577 0.028169 0.985915 0 0 0.0140845 0.056338 0.873239 0.0140845 0.056338 0.957746 0.028169 0 0.0140845 0.056338 0.619718 0.15493 0.169014 0.0140845 0.929577 0 0.056338 0.957746 0.0140845 0.0140845 0.0140845 0.140845 0.802817 0.028169 0.028169 0.957746 0.0140845 0 0.028169 0.084507 0.0140845 0.84507 0.056338 0.028169 0 0.0140845 0.957746 0.028169 0.0140845 0.957746 0 0.056338 0.0422535 0.830986 0.0704225 0.985915 0.0140845 0 0 0.0422535 0.0422535 0.887324 0.028169 0.056338 0.774648 0 0.169014 0.901408 0.028169 0.028169 0.0422535 0.169014 0.676056 0.0985915 0.056338 0.140845 0.126761 0.0422535 0.690141 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 70 CagTGCTCCACTGTGgT Reverse Complement Original Motif Backward 3 8 0.0354167 Original Motif 0.15 0.7 0.0166667 0.133333 0.65 0.15 0.05 0.15 0.166667 0.116667 0.633333 0.0833333 0.05 0.0333333 0.0666667 0.85 0.05 0 0.833333 0.116667 0.0166667 0.966667 0 0.0166667 0.05 0.0166667 0 0.933333 0.0666667 0.833333 0.0666667 0.0333333 0.0333333 0.966667 0 0 1 0 0 0 0.05 0.916667 0.0166667 0.0166667 0.166667 0 0 0.833333 0.0833333 0.0166667 0.9 0 0 0.0166667 0.0166667 0.966667 0 0.0166667 0.966667 0.0166667 0.116667 0.166667 0.483333 0.233333 0.0666667 0.0833333 0.05 0.8 Reverse Complement Motif 0.8 0.0833333 0.05 0.0666667 0.116667 0.483333 0.166667 0.233333 0 0.966667 0.0166667 0.0166667 0.966667 0.0166667 0.0166667 0 0.0833333 0.9 0.0166667 0 0.833333 0 0 0.166667 0.05 0.0166667 0.916667 0.0166667 0 0 0 1 0.0333333 0 0.966667 0 0.0666667 0.0666667 0.833333 0.0333333 0.933333 0.0166667 0 0.05 0.0166667 0 0.966667 0.0166667 0.05 0.833333 0 0.116667 0.85 0.0333333 0.0666667 0.05 0.166667 0.633333 0.116667 0.0833333 0.15 0.15 0.05 0.65 0.15 0.0166667 0.7 0.133333 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Original Motif Forward 16 8 0.0407242 Original Motif 0.111111 0.746032 0.0634921 0.0793651 0.857143 0.047619 0.047619 0.047619 0.047619 0.857143 0.0793651 0.015873 0.031746 0 0 0.968254 0.031746 0.015873 0.904762 0.047619 0 0 0 1 0.031746 0 0.857143 0.111111 0.396825 0.111111 0.412698 0.0793651 0.031746 0.253968 0.015873 0.698413 0.365079 0 0.634921 0 0.0793651 0.206349 0.047619 0.666667 0.047619 0.936508 0.015873 0 0.952381 0 0.015873 0.031746 0.015873 0.920635 0 0.0634921 0.920635 0 0 0.0793651 0.0634921 0.047619 0.84127 0.047619 0 0 0.015873 0.984127 0.047619 0.015873 0.904762 0.031746 0.015873 0.603175 0.31746 0.0634921 0.396825 0 0.015873 0.587302 0.015873 0.47619 0.428571 0.0793651 0.0634921 0.920635 0 0.015873 0.920635 0.015873 0.047619 0.015873 0.0952381 0.68254 0.0952381 0.126984 0.047619 0.015873 0.0952381 0.84127 Reverse Complement Motif 0.84127 0.015873 0.0952381 0.047619 0.0952381 0.0952381 0.68254 0.126984 0.015873 0.015873 0.047619 0.920635 0.0634921 0 0.920635 0.015873 0.015873 0.428571 0.47619 0.0793651 0.587302 0 0.015873 0.396825 0.015873 0.31746 0.603175 0.0634921 0.047619 0.904762 0.015873 0.031746 0.984127 0 0.015873 0 0.0634921 0.84127 0.047619 0.047619 0.0793651 0 0 0.920635 0.015873 0 0.920635 0.0634921 0.031746 0 0.015873 0.952381 0.047619 0.015873 0.936508 0 0.666667 0.206349 0.047619 0.0793651 0.365079 0.634921 0 0 0.698413 0.253968 0.015873 0.031746 0.396825 0.412698 0.111111 0.0793651 0.031746 0.857143 0 0.111111 1 0 0 0 0.031746 0.904762 0.015873 0.047619 0.968254 0 0 0.031746 0.047619 0.0793651 0.857143 0.015873 0.047619 0.047619 0.047619 0.857143 0.111111 0.0634921 0.746032 0.0793651 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 41 Motif 41 Original Motif Reverse Complement Backward 2 8 0.0421875 Original Motif 0 0 0 1 0 0 1 0 0 0 1 0 1 0 0 0 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 1 0 0 1 0 0 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # 3 Motif ID 55 Motif Name ZEB1 Original Motif 0.0243902 0.829268 0.0243902 0.121951 0.926829 0 0.0487805 0.0243902 0 0.97561 0.0243902 0 0 0.926829 0.0731707 0 0 0.0243902 0 0.97561 0.243902 0.0243902 0.390244 0.341463 Reverse Complement Motif 0.243902 0.390244 0.0243902 0.341463 0.97561 0.0243902 0 0 0 0.0731707 0.926829 0 0 0.0243902 0.97561 0 0.0243902 0 0.0487805 0.926829 0.0243902 0.0243902 0.829268 0.121951 *************************************************************** Best Matches for Top Significant Motif ID 55 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 2 47 Motif 47 Original Motif Original Motif Backward 6 6 0 Original Motif 0 0.5 0 0.5 0 0 1 0 0 1 0 0 0 1 0 0 0.714286 0.285714 0 0 0 0.857143 0 0.142857 0 1 0 0 0 0.142857 0.142857 0.714286 0.357143 0 0.357143 0.285714 0 0.428571 0.571429 0 0.142857 0.071429 0 0.785714 0 0 1 0 0.071429 0 0.785714 0.142857 0.142857 0.428571 0 0.428571 Reverse Complement Motif 0.142857 0 0.428571 0.428571 0.071429 0.785714 0 0.142857 0 1 0 0 0.785714 0.071429 0 0.142857 0 0.571429 0.428571 0 0.285714 0 0.357143 0.357143 0.714286 0.142857 0.142857 0 0 0 1 0 0 0 0.857143 0.142857 0 0.285714 0 0.714286 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0.5 0.5 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 5 Motif 5 Original Motif Original Motif Backward 3 6 0.00902841 Original Motif 0 0.8125 0.125 0.0625 0.375 0 0 0.625 0.0625 0 0.9375 0 0.5625 0.125 0.1875 0.125 0 0 1 0 0.0625 0.9375 0 0 0 0.9375 0.0625 0 1 0 0 0 0 0.625 0 0.375 0 0.9375 0.0625 0 0 0 0 1 0 0.5625 0 0.4375 0 0.125 0.125 0.75 0.0625 0.625 0 0.3125 Reverse Complement Motif 0.0625 0 0.625 0.3125 0.75 0.125 0.125 0 0 0 0.5625 0.4375 1 0 0 0 0 0.0625 0.9375 0 0 0 0.625 0.375 0 0 0 1 0 0.0625 0.9375 0 0.0625 0 0.9375 0 0 1 0 0 0.125 0.125 0.1875 0.5625 0.0625 0.9375 0 0 0.625 0 0 0.375 0 0.125 0.8125 0.0625 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 46 Motif 46 Original Motif Reverse Complement Backward 8 6 0.0285279 Original Motif 1 0 0 0 0 0 0 1 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 1 0 0 0.5 0 0.5 1 0 0 0 0 0 0 1 1 0 0 0 Reverse Complement Motif 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0.5 0.5 0 1 0 0 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 20 Motif 20 Original Motif Original Motif Forward 3 6 0.0346255 Original Motif 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 1 0 0 0 1 0 1 0 0 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 12 Motif 12 Original Motif Original Motif Backward 2 6 0.0376742 Original Motif 1 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 Reverse Complement Motif 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 22 Motif 22 Reverse Complement Original Motif Forward 6 6 0.0397068 Original Motif 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 1 Reverse Complement Motif 1 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 34 Motif 34 Reverse Complement Original Motif Forward 2 6 0.0397068 Original Motif 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 1 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 17 Motif 17 Reverse Complement Reverse Complement Backward 6 6 0.0458043 Original Motif 0 1 0 0 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 1 0 0 Reverse Complement Motif 0 0 1 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 1 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 92 TFM11 Original Motif Original Motif Backward 7 6 0.0461561 Original Motif 0 0.769231 0 0.230769 0.730769 0 0.192308 0.0769231 0.346154 0.576923 0.0384615 0.0384615 0.923077 0.0769231 0 0 0.153846 0.769231 0.0769231 0 0.923077 0.0769231 0 0 0 0.807692 0.0769231 0.115385 0.846154 0.153846 0 0 0.115385 0.846154 0.0384615 0 0.807692 0 0 0.192308 0.0384615 0.884615 0 0.0769231 0.692308 0 0.0769231 0.230769 0.0769231 0.538462 0 0.384615 0.461538 0.0384615 0.269231 0.230769 0 0.807692 0.192308 0 0.807692 0.153846 0 0.0384615 0.0769231 0.692308 0 0.230769 0.807692 0 0.192308 0 0.0769231 0.730769 0.115385 0.0769231 0.923077 0 0 0.0769231 Reverse Complement Motif 0.0769231 0 0 0.923077 0.0769231 0.115385 0.730769 0.0769231 0 0 0.192308 0.807692 0.0769231 0 0.692308 0.230769 0.0384615 0.153846 0 0.807692 0 0.192308 0.807692 0 0.230769 0.0384615 0.269231 0.461538 0.0769231 0 0.538462 0.384615 0.230769 0 0.0769231 0.692308 0.0384615 0 0.884615 0.0769231 0.192308 0 0 0.807692 0.115385 0.0384615 0.846154 0 0 0.153846 0 0.846154 0 0.0769231 0.807692 0.115385 0 0.0769231 0 0.923077 0.153846 0.0769231 0.769231 0 0 0.0769231 0 0.923077 0.346154 0.0384615 0.576923 0.0384615 0.0769231 0 0.192308 0.730769 0 0 0.769231 0.230769 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 89 TFM1 Original Motif Original Motif Forward 7 6 0.0467843 Original Motif 0.107143 0.642857 0 0.25 0.785714 0.0357143 0.0714286 0.107143 0.25 0.714286 0.0357143 0 1 0 0 0 0 0.892857 0.107143 0 0.821429 0.142857 0 0.0357143 0.107143 0.785714 0.0714286 0.0357143 0.857143 0 0 0.142857 0 0.928571 0.0357143 0.0357143 0.785714 0 0.0714286 0.142857 0.142857 0.571429 0 0.285714 0.5 0 0.214286 0.285714 0 0.821429 0.178571 0 0.75 0.178571 0 0.0714286 0.0357143 0.821429 0 0.142857 0.857143 0.0357143 0.107143 0 0.178571 0.642857 0.178571 0 0.964286 0 0.0357143 0 Reverse Complement Motif 0 0 0.0357143 0.964286 0.178571 0.178571 0.642857 0 0 0.0357143 0.107143 0.857143 0.0357143 0 0.821429 0.142857 0.0714286 0.178571 0 0.75 0 0.178571 0.821429 0 0.285714 0 0.214286 0.5 0.142857 0 0.571429 0.285714 0.142857 0 0.0714286 0.785714 0 0.0357143 0.928571 0.0357143 0.142857 0 0 0.857143 0.107143 0.0714286 0.785714 0.0357143 0.0357143 0.142857 0 0.821429 0 0.107143 0.892857 0 0 0 0 1 0.25 0.0357143 0.714286 0 0.107143 0.0357143 0.0714286 0.785714 0.107143 0 0.642857 0.25 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # 1 Motif ID 3 Motif Name Motif 3 Original Motif 0.239437 0.274648 0.0774649 0.408451 0.084507 0.65493 0.147887 0.112676 0.753521 0 0 0.246479 0.309859 0 0.65493 0.035211 0.302817 0.049296 0.584507 0.06338 0.542254 0.007042 0.394366 0.056338 0.457746 0.253521 0.190141 0.098592 0.584507 0.169014 0.232394 0.014085 0.274648 0.62676 0.0985919 0 0.852112 0 0.021127 0.126761 0 0.570423 0.429577 0 0.760563 0 0 0.239437 0.204225 0.021127 0.774648 0 Reverse Complement Motif 0.204225 0.774648 0.021127 0 0.239437 0 0 0.760563 0 0.429577 0.570423 0 0.126761 0 0.021127 0.852112 0.274648 0.0985919 0.62676 0 0.014085 0.169014 0.232394 0.584507 0.098592 0.253521 0.190141 0.457746 0.056338 0.007042 0.394366 0.542254 0.302817 0.584507 0.049296 0.06338 0.309859 0.65493 0 0.035211 0.246479 0 0 0.753521 0.084507 0.147887 0.65493 0.112676 0.408451 0.274648 0.0774649 0.239437 *************************************************************** Best Matches for Top Significant Motif ID 3 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 93 TFM12 Original Motif Original Motif Forward 7 13 0.00926418 Original Motif 0.380282 0.211268 0.373239 0.0352113 0.746479 0.0422535 0.119718 0.0915493 0.28169 0.0492958 0.56338 0.105634 0.21831 0 0.443662 0.338028 0.161972 0.126761 0.598592 0.112676 0.267606 0.528169 0.176056 0.028169 0.640845 0.028169 0.0915493 0.239437 0.0633803 0.084507 0.809859 0.0422535 0.366197 0.246479 0.211268 0.176056 0.471831 0.140845 0.309859 0.0774648 0.373239 0 0.542254 0.084507 0.211268 0.105634 0.605634 0.0774648 0.197183 0.302817 0.478873 0.0211268 0.408451 0.140845 0.387324 0.0633803 0.0985915 0.704225 0.197183 0 0.683099 0.028169 0.0704225 0.21831 0.140845 0.373239 0.485915 0 0.788732 0 0.0633803 0.147887 0 0.169014 0.816901 0.0140845 0.274648 0.295775 0.239437 0.190141 Reverse Complement Motif 0.274648 0.239437 0.295775 0.190141 0 0.816901 0.169014 0.0140845 0.147887 0 0.0633803 0.788732 0.140845 0.485915 0.373239 0 0.21831 0.028169 0.0704225 0.683099 0.0985915 0.197183 0.704225 0 0.0633803 0.140845 0.387324 0.408451 0.197183 0.478873 0.302817 0.0211268 0.211268 0.605634 0.105634 0.0774648 0.373239 0.542254 0 0.084507 0.0774648 0.140845 0.309859 0.471831 0.176056 0.246479 0.211268 0.366197 0.0633803 0.809859 0.084507 0.0422535 0.239437 0.028169 0.0915493 0.640845 0.267606 0.176056 0.528169 0.028169 0.161972 0.598592 0.126761 0.112676 0.21831 0.443662 0 0.338028 0.28169 0.56338 0.0492958 0.105634 0.0915493 0.0422535 0.119718 0.746479 0.0352113 0.211268 0.373239 0.380282 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 53 ESR1 Original Motif Original Motif Forward 4 13 0.0328703 Original Motif 0.261242 0.256959 0.329764 0.152034 0.228632 0.17094 0.350427 0.25 0.136752 0.369658 0.318376 0.175214 0.176596 0.487234 0.138298 0.197872 0.285106 0.493617 0.1 0.121277 0.651163 0.0591966 0.188161 0.10148 0.0759494 0.0168776 0.816456 0.0907173 0.04 0.0378947 0.884211 0.0378947 0.0694737 0.0863158 0.191579 0.652632 0.00842105 0.829474 0.111579 0.0505263 0.837895 0.0273684 0.0568421 0.0778947 0.122105 0.526316 0.225263 0.126316 0.132632 0.581053 0.111579 0.174737 0.134737 0.543158 0.204211 0.117895 0.0673684 0.04 0.0168421 0.875789 0.0442105 0.0463158 0.896842 0.0126316 0.642105 0.223158 0.0652632 0.0694737 0.0210526 0.917895 0.0252632 0.0357895 0.124211 0.743158 0.00421053 0.128421 0.0547368 0.347368 0.0463158 0.551579 Reverse Complement Motif 0.551579 0.347368 0.0463158 0.0547368 0.124211 0.00421053 0.743158 0.128421 0.0210526 0.0252632 0.917895 0.0357895 0.0694737 0.223158 0.0652632 0.642105 0.0442105 0.896842 0.0463158 0.0126316 0.875789 0.04 0.0168421 0.0673684 0.134737 0.204211 0.543158 0.117895 0.132632 0.111579 0.581053 0.174737 0.122105 0.225263 0.526316 0.126316 0.0778947 0.0273684 0.0568421 0.837895 0.00842105 0.111579 0.829474 0.0505263 0.652632 0.0863158 0.191579 0.0694737 0.04 0.884211 0.0378947 0.0378947 0.0759494 0.816456 0.0168776 0.0907173 0.10148 0.0591966 0.188161 0.651163 0.285106 0.1 0.493617 0.121277 0.176596 0.138298 0.487234 0.197872 0.136752 0.318376 0.369658 0.175214 0.228632 0.350427 0.17094 0.25 0.261242 0.329764 0.256959 0.152034 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Reverse Complement Forward 11 13 0.0400966 Original Motif 0.111111 0.746032 0.0634921 0.0793651 0.857143 0.047619 0.047619 0.047619 0.047619 0.857143 0.0793651 0.015873 0.031746 0 0 0.968254 0.031746 0.015873 0.904762 0.047619 0 0 0 1 0.031746 0 0.857143 0.111111 0.396825 0.111111 0.412698 0.0793651 0.031746 0.253968 0.015873 0.698413 0.365079 0 0.634921 0 0.0793651 0.206349 0.047619 0.666667 0.047619 0.936508 0.015873 0 0.952381 0 0.015873 0.031746 0.015873 0.920635 0 0.0634921 0.920635 0 0 0.0793651 0.0634921 0.047619 0.84127 0.047619 0 0 0.015873 0.984127 0.047619 0.015873 0.904762 0.031746 0.015873 0.603175 0.31746 0.0634921 0.396825 0 0.015873 0.587302 0.015873 0.47619 0.428571 0.0793651 0.0634921 0.920635 0 0.015873 0.920635 0.015873 0.047619 0.015873 0.0952381 0.68254 0.0952381 0.126984 0.047619 0.015873 0.0952381 0.84127 Reverse Complement Motif 0.84127 0.015873 0.0952381 0.047619 0.0952381 0.0952381 0.68254 0.126984 0.015873 0.015873 0.047619 0.920635 0.0634921 0 0.920635 0.015873 0.015873 0.428571 0.47619 0.0793651 0.587302 0 0.015873 0.396825 0.015873 0.31746 0.603175 0.0634921 0.047619 0.904762 0.015873 0.031746 0.984127 0 0.015873 0 0.0634921 0.84127 0.047619 0.047619 0.0793651 0 0 0.920635 0.015873 0 0.920635 0.0634921 0.031746 0 0.015873 0.952381 0.047619 0.015873 0.936508 0 0.666667 0.206349 0.047619 0.0793651 0.365079 0.634921 0 0 0.698413 0.253968 0.015873 0.031746 0.396825 0.412698 0.111111 0.0793651 0.031746 0.857143 0 0.111111 1 0 0 0 0.031746 0.904762 0.015873 0.047619 0.968254 0 0 0.031746 0.047619 0.0793651 0.857143 0.015873 0.047619 0.047619 0.047619 0.857143 0.111111 0.0634921 0.746032 0.0793651 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 90 TFM2 Original Motif Reverse Complement Forward 3 13 0.0435274 Original Motif 0.105634 0.514085 0.15493 0.225352 0.239437 0.408451 0.0985915 0.253521 0.302817 0.239437 0.0422535 0.415493 0.147887 0.598592 0.169014 0.084507 0.316901 0.422535 0.0211268 0.239437 0.0492958 0.380282 0.21831 0.352113 0.183099 0.133803 0.0915493 0.591549 0 0.598592 0.246479 0.15493 0.0704225 0.753521 0 0.176056 0.232394 0 0.0633803 0.704225 0 0.394366 0.556338 0.0492958 0.0352113 0.901408 0 0.0633803 0.056338 0.591549 0 0.352113 0.119718 0.246479 0.028169 0.605634 0.028169 0.626761 0.253521 0.0915493 0.211268 0 0.0774648 0.711268 0.0633803 0.190141 0.65493 0.0915493 0.126761 0.584507 0 0.288732 Reverse Complement Motif 0.126761 0 0.584507 0.288732 0.0633803 0.65493 0.190141 0.0915493 0.711268 0 0.0774648 0.211268 0.028169 0.253521 0.626761 0.0915493 0.605634 0.246479 0.028169 0.119718 0.056338 0 0.591549 0.352113 0.0352113 0 0.901408 0.0633803 0 0.556338 0.394366 0.0492958 0.704225 0 0.0633803 0.232394 0.0704225 0 0.753521 0.176056 0 0.246479 0.598592 0.15493 0.591549 0.133803 0.0915493 0.183099 0.0492958 0.21831 0.380282 0.352113 0.316901 0.0211268 0.422535 0.239437 0.147887 0.169014 0.598592 0.084507 0.415493 0.239437 0.0422535 0.302817 0.239437 0.0985915 0.408451 0.253521 0.105634 0.15493 0.514085 0.225352 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 66 CTCF Original Motif Original Motif Backward 1 13 0.0448341 Original Motif 0.0952903 0.318729 0.0832421 0.502738 0.182913 0.158817 0.45345 0.204819 0.307777 0.0536692 0.491785 0.146769 0.0613363 0.876232 0.0230011 0.0394304 0.00876232 0.989047 0 0.00219058 0.814896 0.0142388 0.0711939 0.0996714 0.0438116 0.578313 0.365827 0.0120482 0.117325 0.474781 0.0526316 0.355263 0.933114 0.0120614 0.0350877 0.0197368 0.00548847 0 0.991218 0.00329308 0.365532 0.00329308 0.621295 0.00987925 0.0592755 0.0131723 0.553238 0.374314 0.0131868 0 0.978022 0.00879121 0.0615385 0.00879121 0.851648 0.078022 0.114411 0.806381 0.00550055 0.0737074 0.409241 0.0143014 0.557756 0.0187019 0.0903084 0.530837 0.338106 0.0407489 0.128855 0.354626 0.0803965 0.436123 0.442731 0.199339 0.292952 0.064978 Reverse Complement Motif 0.064978 0.199339 0.292952 0.442731 0.436123 0.354626 0.0803965 0.128855 0.0903084 0.338106 0.530837 0.0407489 0.409241 0.557756 0.0143014 0.0187019 0.114411 0.00550055 0.806381 0.0737074 0.0615385 0.851648 0.00879121 0.078022 0.0131868 0.978022 0 0.00879121 0.0592755 0.553238 0.0131723 0.374314 0.365532 0.621295 0.00329308 0.00987925 0.00548847 0.991218 0 0.00329308 0.0197368 0.0120614 0.0350877 0.933114 0.117325 0.0526316 0.474781 0.355263 0.0438116 0.365827 0.578313 0.0120482 0.0996714 0.0142388 0.0711939 0.814896 0.00876232 0 0.989047 0.00219058 0.0613363 0.0230011 0.876232 0.0394304 0.307777 0.491785 0.0536692 0.146769 0.182913 0.45345 0.158817 0.204819 0.502738 0.318729 0.0832421 0.0952903 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 73 TGGAGCACTGTGACAcCACAGTGg Reverse Complement Reverse Complement Backward 9 13 0.045698 Original Motif 0.0540541 0.0405405 0.0540541 0.851351 0.0405405 0.0135135 0.824324 0.121622 0.0945946 0.135135 0.756757 0.0135135 0.891892 0 0 0.108108 0.0405405 0.0945946 0.810811 0.0540541 0.0810811 0.797297 0.0540541 0.0675676 0.932432 0.027027 0 0.0405405 0.0540541 0.756757 0.135135 0.0540541 0.108108 0.027027 0.0135135 0.851351 0.108108 0 0.851351 0.0405405 0.0135135 0 0.027027 0.959459 0 0.0135135 0.945946 0.0405405 0.905405 0 0.0675676 0.027027 0.0540541 0.837838 0 0.108108 0.945946 0.0135135 0.0405405 0 0.162162 0.5 0.189189 0.148649 0.108108 0.824324 0 0.0675676 0.945946 0 0.0405405 0.0135135 0.0810811 0.837838 0.027027 0.0540541 0.945946 0 0.0135135 0.0405405 0.0540541 0.0675676 0.783784 0.0945946 0.0540541 0.027027 0 0.918919 0.0405405 0.0135135 0.864865 0.0810811 0.148649 0.121622 0.675676 0.0540541 Reverse Complement Motif 0.148649 0.675676 0.121622 0.0540541 0.0405405 0.864865 0.0135135 0.0810811 0.918919 0.027027 0 0.0540541 0.0540541 0.783784 0.0675676 0.0945946 0.0405405 0 0.0135135 0.945946 0.0810811 0.027027 0.837838 0.0540541 0.0135135 0 0.0405405 0.945946 0.108108 0 0.824324 0.0675676 0.162162 0.189189 0.5 0.148649 0 0.0135135 0.0405405 0.945946 0.0540541 0 0.837838 0.108108 0.027027 0 0.0675676 0.905405 0 0.945946 0.0135135 0.0405405 0.959459 0 0.027027 0.0135135 0.108108 0.851351 0 0.0405405 0.851351 0.027027 0.0135135 0.108108 0.0540541 0.135135 0.756757 0.0540541 0.0405405 0.027027 0 0.932432 0.0810811 0.0540541 0.797297 0.0675676 0.0405405 0.810811 0.0945946 0.0540541 0.108108 0 0 0.891892 0.0945946 0.756757 0.135135 0.0135135 0.0405405 0.824324 0.0135135 0.121622 0.851351 0.0405405 0.0540541 0.0540541 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 64 PPARGRXRA Original Motif Original Motif Backward 3 13 0.0457253 Original Motif 0.109685 0.369895 0.373396 0.147025 0.117716 0.193473 0.148019 0.540793 0.453488 0.0267442 0.427907 0.0918605 0.116144 0.00348432 0.779326 0.101045 0.161253 0.0174014 0.781903 0.0394432 0.168213 0.149652 0.458237 0.223898 0.0822711 0.633835 0.207416 0.0764774 0.949015 0.0243337 0.0173812 0.00926999 0.604867 0.0556199 0.312862 0.0266512 0.825231 0.00578704 0.158565 0.0104167 0.0950174 0.0023175 0.88876 0.013905 0.0475087 0.0104287 0.803013 0.13905 0.0254925 0.114716 0.304751 0.555041 0.062645 0.643852 0.167053 0.12645 0.784223 0.0672854 0.0545244 0.0939675 Reverse Complement Motif 0.0939675 0.0672854 0.0545244 0.784223 0.062645 0.167053 0.643852 0.12645 0.555041 0.114716 0.304751 0.0254925 0.0475087 0.803013 0.0104287 0.13905 0.0950174 0.88876 0.0023175 0.013905 0.0104167 0.00578704 0.158565 0.825231 0.0266512 0.0556199 0.312862 0.604867 0.00926999 0.0243337 0.0173812 0.949015 0.0822711 0.207416 0.633835 0.0764774 0.168213 0.458237 0.149652 0.223898 0.161253 0.781903 0.0174014 0.0394432 0.116144 0.779326 0.00348432 0.101045 0.0918605 0.0267442 0.427907 0.453488 0.540793 0.193473 0.148019 0.117716 0.109685 0.373396 0.369895 0.147025 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 65 Tcfcp2l1 Reverse Complement Reverse Complement Backward 2 13 0.0477557 Original Motif 0.00196754 0.92548 0.0627152 0.00983768 0.069973 0.807513 0.00540142 0.117113 0.594508 0.00514832 0.275803 0.12454 0.0058838 0.0237803 0.967149 0.00318706 0.175477 0.33627 0.0256975 0.462555 0.0983847 0.28928 0.0621635 0.550171 0.173924 0.39726 0.151174 0.277642 0.357213 0.224939 0.252323 0.165526 0.63154 0.0696822 0.190954 0.107824 0.394421 0.0513824 0.310497 0.2437 0.00366928 0.933219 0.0547945 0.00831703 0.0617193 0.812148 0.00293902 0.123194 0.536555 0.00736016 0.305937 0.150147 0.0120393 0.0289926 0.954791 0.0041769 Reverse Complement Motif 0.0120393 0.954791 0.0289926 0.0041769 0.150147 0.00736016 0.305937 0.536555 0.0617193 0.00293902 0.812148 0.123194 0.00366928 0.0547945 0.933219 0.00831703 0.2437 0.0513824 0.310497 0.394421 0.107824 0.0696822 0.190954 0.63154 0.165526 0.224939 0.252323 0.357213 0.173924 0.151174 0.39726 0.277642 0.550171 0.28928 0.0621635 0.0983847 0.462555 0.33627 0.0256975 0.175477 0.0058838 0.967149 0.0237803 0.00318706 0.12454 0.00514832 0.275803 0.594508 0.069973 0.00540142 0.807513 0.117113 0.00196754 0.0627152 0.92548 0.00983768 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 94 TFM13 Original Motif Reverse Complement Backward 4 13 0.0478998 Original Motif 0.0714286 0.142857 0 0.785714 0.0714286 0.0714286 0 0.857143 0 0 0 1 0 0.0714286 0.285714 0.642857 0 0.142857 0 0.857143 0 0 0 1 0.0714286 0 0.0714286 0.857143 0.142857 0 0.357143 0.5 0.0714286 0 0 0.928571 0 0.0714286 0 0.928571 0 0 0.357143 0.642857 0 0 0 1 0 0 0.214286 0.785714 0.142857 0 0 0.857143 0.571429 0.0714286 0.214286 0.142857 0.857143 0 0 0.142857 0.142857 0 0.285714 0.571429 0 0.0714286 0.285714 0.642857 0.357143 0.357143 0.0714286 0.214286 0.428571 0 0.0714286 0.5 Reverse Complement Motif 0.5 0 0.0714286 0.428571 0.214286 0.357143 0.0714286 0.357143 0.642857 0.0714286 0.285714 0 0.571429 0 0.285714 0.142857 0.142857 0 0 0.857143 0.142857 0.0714286 0.214286 0.571429 0.857143 0 0 0.142857 0.785714 0 0.214286 0 1 0 0 0 0.642857 0 0.357143 0 0.928571 0.0714286 0 0 0.928571 0 0 0.0714286 0.5 0 0.357143 0.142857 0.857143 0 0.0714286 0.0714286 1 0 0 0 0.857143 0.142857 0 0 0.642857 0.0714286 0.285714 0 1 0 0 0 0.857143 0.0714286 0 0.0714286 0.785714 0.142857 0 0.0714286 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 88 TFF11 Original Motif Reverse Complement Forward 2 13 0.048132 Original Motif 0.0985915 0.556338 0.246479 0.0985915 0.28169 0.00704225 0.0985915 0.612676 0.00704225 0.0211268 0.971831 0 0.00704225 0.971831 0.00704225 0.0140845 0.00704225 0 0 0.992958 0 0 1 0 0.176056 0.415493 0.232394 0.176056 0.267606 0.197183 0.267606 0.267606 0.119718 0.190141 0.401408 0.288732 0.0985915 0.43662 0.211268 0.253521 0.239437 0.15493 0.183099 0.422535 0.126761 0.140845 0.619718 0.112676 0.190141 0.28169 0.225352 0.302817 0.232394 0.176056 0.373239 0.21831 Reverse Complement Motif 0.232394 0.373239 0.176056 0.21831 0.302817 0.28169 0.225352 0.190141 0.126761 0.619718 0.140845 0.112676 0.422535 0.15493 0.183099 0.239437 0.0985915 0.211268 0.43662 0.253521 0.119718 0.401408 0.190141 0.288732 0.267606 0.197183 0.267606 0.267606 0.176056 0.232394 0.415493 0.176056 0 1 0 0 0.992958 0 0 0.00704225 0.00704225 0.00704225 0.971831 0.0140845 0.00704225 0.971831 0.0211268 0 0.612676 0.00704225 0.0985915 0.28169 0.0985915 0.246479 0.556338 0.0985915 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # 2 Motif ID 48 Motif Name Motif 48 Original Motif 0.02381 0 0.97619 0 0.238095 0.714286 0 0.047619 0.95238 0.02381 0 0.02381 0.380952 0.142857 0.452381 0.02381 0.52381 0.190476 0.285714 0 0.095238 0.047619 0.619048 0.238095 0 0.02381 0.904761 0.0714289 0 0.571429 0.428571 0 0.97619 0.02381 0 0 0.333333 0 0.666667 0 0 0.428571 0.571429 0 Reverse Complement Motif 0 0.571429 0.428571 0 0.333333 0.666667 0 0 0 0.02381 0 0.97619 0 0.428571 0.571429 0 0 0.904761 0.02381 0.0714289 0.095238 0.619048 0.047619 0.238095 0 0.190476 0.285714 0.52381 0.380952 0.452381 0.142857 0.02381 0.02381 0.02381 0 0.95238 0.238095 0 0.714286 0.047619 0.02381 0.97619 0 0 *************************************************************** Best Matches for Top Significant Motif ID 48 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 1 Motif 1 Original Motif Reverse Complement Backward 1 11 0 Original Motif 0 0.598592 0.176056 0.225352 0 0.626761 0 0.373239 0 0 0 1 0 0.408451 0.514084 0.0774649 0.091549 0.823944 0.028169 0.056338 0.133803 0.690141 0 0.176056 0.042254 0.28169 0 0.676056 0.007042 0.683099 0.197183 0.112676 0.197183 0 0 0.802817 0 0.084507 0.690141 0.225352 0.091549 0.605634 0.169014 0.133803 Reverse Complement Motif 0.091549 0.169014 0.605634 0.133803 0 0.690141 0.084507 0.225352 0.802817 0 0 0.197183 0.007042 0.197183 0.683099 0.112676 0.676056 0.28169 0 0.042254 0.133803 0 0.690141 0.176056 0.091549 0.028169 0.823944 0.056338 0 0.514084 0.408451 0.0774649 1 0 0 0 0 0 0.626761 0.373239 0 0.176056 0.598592 0.225352 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 90 TFM2 Original Motif Reverse Complement Forward 1 11 0.000952693 Original Motif 0.105634 0.514085 0.15493 0.225352 0.239437 0.408451 0.0985915 0.253521 0.302817 0.239437 0.0422535 0.415493 0.147887 0.598592 0.169014 0.084507 0.316901 0.422535 0.0211268 0.239437 0.0492958 0.380282 0.21831 0.352113 0.183099 0.133803 0.0915493 0.591549 0 0.598592 0.246479 0.15493 0.0704225 0.753521 0 0.176056 0.232394 0 0.0633803 0.704225 0 0.394366 0.556338 0.0492958 0.0352113 0.901408 0 0.0633803 0.056338 0.591549 0 0.352113 0.119718 0.246479 0.028169 0.605634 0.028169 0.626761 0.253521 0.0915493 0.211268 0 0.0774648 0.711268 0.0633803 0.190141 0.65493 0.0915493 0.126761 0.584507 0 0.288732 Reverse Complement Motif 0.126761 0 0.584507 0.288732 0.0633803 0.65493 0.190141 0.0915493 0.711268 0 0.0774648 0.211268 0.028169 0.253521 0.626761 0.0915493 0.605634 0.246479 0.028169 0.119718 0.056338 0 0.591549 0.352113 0.0352113 0 0.901408 0.0633803 0 0.556338 0.394366 0.0492958 0.704225 0 0.0633803 0.232394 0.0704225 0 0.753521 0.176056 0 0.246479 0.598592 0.15493 0.591549 0.133803 0.0915493 0.183099 0.0492958 0.21831 0.380282 0.352113 0.316901 0.0211268 0.422535 0.239437 0.147887 0.169014 0.598592 0.084507 0.415493 0.239437 0.0422535 0.302817 0.239437 0.0985915 0.408451 0.253521 0.105634 0.15493 0.514085 0.225352 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 66 CTCF Original Motif Original Motif Backward 3 11 0.033658 Original Motif 0.0952903 0.318729 0.0832421 0.502738 0.182913 0.158817 0.45345 0.204819 0.307777 0.0536692 0.491785 0.146769 0.0613363 0.876232 0.0230011 0.0394304 0.00876232 0.989047 0 0.00219058 0.814896 0.0142388 0.0711939 0.0996714 0.0438116 0.578313 0.365827 0.0120482 0.117325 0.474781 0.0526316 0.355263 0.933114 0.0120614 0.0350877 0.0197368 0.00548847 0 0.991218 0.00329308 0.365532 0.00329308 0.621295 0.00987925 0.0592755 0.0131723 0.553238 0.374314 0.0131868 0 0.978022 0.00879121 0.0615385 0.00879121 0.851648 0.078022 0.114411 0.806381 0.00550055 0.0737074 0.409241 0.0143014 0.557756 0.0187019 0.0903084 0.530837 0.338106 0.0407489 0.128855 0.354626 0.0803965 0.436123 0.442731 0.199339 0.292952 0.064978 Reverse Complement Motif 0.064978 0.199339 0.292952 0.442731 0.436123 0.354626 0.0803965 0.128855 0.0903084 0.338106 0.530837 0.0407489 0.409241 0.557756 0.0143014 0.0187019 0.114411 0.00550055 0.806381 0.0737074 0.0615385 0.851648 0.00879121 0.078022 0.0131868 0.978022 0 0.00879121 0.0592755 0.553238 0.0131723 0.374314 0.365532 0.621295 0.00329308 0.00987925 0.00548847 0.991218 0 0.00329308 0.0197368 0.0120614 0.0350877 0.933114 0.117325 0.0526316 0.474781 0.355263 0.0438116 0.365827 0.578313 0.0120482 0.0996714 0.0142388 0.0711939 0.814896 0.00876232 0 0.989047 0.00219058 0.0613363 0.0230011 0.876232 0.0394304 0.307777 0.491785 0.0536692 0.146769 0.182913 0.45345 0.158817 0.204819 0.502738 0.318729 0.0832421 0.0952903 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 88 TFF11 Reverse Complement Original Motif Forward 3 11 0.0410341 Original Motif 0.0985915 0.556338 0.246479 0.0985915 0.28169 0.00704225 0.0985915 0.612676 0.00704225 0.0211268 0.971831 0 0.00704225 0.971831 0.00704225 0.0140845 0.00704225 0 0 0.992958 0 0 1 0 0.176056 0.415493 0.232394 0.176056 0.267606 0.197183 0.267606 0.267606 0.119718 0.190141 0.401408 0.288732 0.0985915 0.43662 0.211268 0.253521 0.239437 0.15493 0.183099 0.422535 0.126761 0.140845 0.619718 0.112676 0.190141 0.28169 0.225352 0.302817 0.232394 0.176056 0.373239 0.21831 Reverse Complement Motif 0.232394 0.373239 0.176056 0.21831 0.302817 0.28169 0.225352 0.190141 0.126761 0.619718 0.140845 0.112676 0.422535 0.15493 0.183099 0.239437 0.0985915 0.211268 0.43662 0.253521 0.119718 0.401408 0.190141 0.288732 0.267606 0.197183 0.267606 0.267606 0.176056 0.232394 0.415493 0.176056 0 1 0 0 0.992958 0 0 0.00704225 0.00704225 0.00704225 0.971831 0.0140845 0.00704225 0.971831 0.0211268 0 0.612676 0.00704225 0.0985915 0.28169 0.0985915 0.246479 0.556338 0.0985915 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 93 TFM12 Original Motif Original Motif Forward 5 11 0.0422459 Original Motif 0.380282 0.211268 0.373239 0.0352113 0.746479 0.0422535 0.119718 0.0915493 0.28169 0.0492958 0.56338 0.105634 0.21831 0 0.443662 0.338028 0.161972 0.126761 0.598592 0.112676 0.267606 0.528169 0.176056 0.028169 0.640845 0.028169 0.0915493 0.239437 0.0633803 0.084507 0.809859 0.0422535 0.366197 0.246479 0.211268 0.176056 0.471831 0.140845 0.309859 0.0774648 0.373239 0 0.542254 0.084507 0.211268 0.105634 0.605634 0.0774648 0.197183 0.302817 0.478873 0.0211268 0.408451 0.140845 0.387324 0.0633803 0.0985915 0.704225 0.197183 0 0.683099 0.028169 0.0704225 0.21831 0.140845 0.373239 0.485915 0 0.788732 0 0.0633803 0.147887 0 0.169014 0.816901 0.0140845 0.274648 0.295775 0.239437 0.190141 Reverse Complement Motif 0.274648 0.239437 0.295775 0.190141 0 0.816901 0.169014 0.0140845 0.147887 0 0.0633803 0.788732 0.140845 0.485915 0.373239 0 0.21831 0.028169 0.0704225 0.683099 0.0985915 0.197183 0.704225 0 0.0633803 0.140845 0.387324 0.408451 0.197183 0.478873 0.302817 0.0211268 0.211268 0.605634 0.105634 0.0774648 0.373239 0.542254 0 0.084507 0.0774648 0.140845 0.309859 0.471831 0.176056 0.246479 0.211268 0.366197 0.0633803 0.809859 0.084507 0.0422535 0.239437 0.028169 0.0915493 0.640845 0.267606 0.176056 0.528169 0.028169 0.161972 0.598592 0.126761 0.112676 0.21831 0.443662 0 0.338028 0.28169 0.56338 0.0492958 0.105634 0.0915493 0.0422535 0.119718 0.746479 0.0352113 0.211268 0.373239 0.380282 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 65 Tcfcp2l1 Reverse Complement Original Motif Forward 1 11 0.0533531 Original Motif 0.00196754 0.92548 0.0627152 0.00983768 0.069973 0.807513 0.00540142 0.117113 0.594508 0.00514832 0.275803 0.12454 0.0058838 0.0237803 0.967149 0.00318706 0.175477 0.33627 0.0256975 0.462555 0.0983847 0.28928 0.0621635 0.550171 0.173924 0.39726 0.151174 0.277642 0.357213 0.224939 0.252323 0.165526 0.63154 0.0696822 0.190954 0.107824 0.394421 0.0513824 0.310497 0.2437 0.00366928 0.933219 0.0547945 0.00831703 0.0617193 0.812148 0.00293902 0.123194 0.536555 0.00736016 0.305937 0.150147 0.0120393 0.0289926 0.954791 0.0041769 Reverse Complement Motif 0.0120393 0.954791 0.0289926 0.0041769 0.150147 0.00736016 0.305937 0.536555 0.0617193 0.00293902 0.812148 0.123194 0.00366928 0.0547945 0.933219 0.00831703 0.2437 0.0513824 0.310497 0.394421 0.107824 0.0696822 0.190954 0.63154 0.165526 0.224939 0.252323 0.357213 0.173924 0.151174 0.39726 0.277642 0.550171 0.28928 0.0621635 0.0983847 0.462555 0.33627 0.0256975 0.175477 0.0058838 0.967149 0.0237803 0.00318706 0.12454 0.00514832 0.275803 0.594508 0.069973 0.00540142 0.807513 0.117113 0.00196754 0.0627152 0.92548 0.00983768 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 57 REST Reverse Complement Reverse Complement Forward 4 11 0.0578944 Original Motif 0.132621 0.109365 0.230044 0.52797 0.0363181 0.168441 0.0914214 0.70382 0.0475892 0.855354 0.0313087 0.0657483 0.906367 0.0187266 0.0586767 0.0162297 0.021197 0.0274314 0.945137 0.00623441 0.0760125 0.609346 0.201246 0.113396 0.980697 0.00435866 0.00747198 0.00747198 0.001868 0.987547 0.00747198 0.00311333 0.0217933 0.922167 0.0124533 0.0435866 0.568847 0.125234 0.100935 0.204984 0.136534 0.233791 0.0773067 0.552369 0.0243142 0.00436409 0.966958 0.00436409 0.0124688 0.00311721 0.983167 0.00124688 0.877105 0.069869 0.0212102 0.0318153 0.008125 0.8 0.145625 0.04625 0.98375 0.005625 0.004375 0.00625 0.0263488 0.00815558 0.959849 0.00564617 0.128688 0.632141 0.114878 0.124294 0.229899 0.0194724 0.432161 0.318467 0.133962 0.586792 0.200629 0.0786164 0.112579 0.700629 0.0232704 0.163522 Reverse Complement Motif 0.112579 0.0232704 0.700629 0.163522 0.133962 0.200629 0.586792 0.0786164 0.229899 0.432161 0.0194724 0.318467 0.128688 0.114878 0.632141 0.124294 0.0263488 0.959849 0.00815558 0.00564617 0.00625 0.005625 0.004375 0.98375 0.008125 0.145625 0.8 0.04625 0.0318153 0.069869 0.0212102 0.877105 0.0124688 0.983167 0.00311721 0.00124688 0.0243142 0.966958 0.00436409 0.00436409 0.552369 0.233791 0.0773067 0.136534 0.204984 0.125234 0.100935 0.568847 0.0217933 0.0124533 0.922167 0.0435866 0.001868 0.00747198 0.987547 0.00311333 0.00747198 0.00435866 0.00747198 0.980697 0.0760125 0.201246 0.609346 0.113396 0.021197 0.945137 0.0274314 0.00623441 0.0162297 0.0187266 0.0586767 0.906367 0.0475892 0.0313087 0.855354 0.0657483 0.70382 0.168441 0.0914214 0.0363181 0.52797 0.109365 0.230044 0.132621 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 53 ESR1 Original Motif Original Motif Backward 8 11 0.0620615 Original Motif 0.261242 0.256959 0.329764 0.152034 0.228632 0.17094 0.350427 0.25 0.136752 0.369658 0.318376 0.175214 0.176596 0.487234 0.138298 0.197872 0.285106 0.493617 0.1 0.121277 0.651163 0.0591966 0.188161 0.10148 0.0759494 0.0168776 0.816456 0.0907173 0.04 0.0378947 0.884211 0.0378947 0.0694737 0.0863158 0.191579 0.652632 0.00842105 0.829474 0.111579 0.0505263 0.837895 0.0273684 0.0568421 0.0778947 0.122105 0.526316 0.225263 0.126316 0.132632 0.581053 0.111579 0.174737 0.134737 0.543158 0.204211 0.117895 0.0673684 0.04 0.0168421 0.875789 0.0442105 0.0463158 0.896842 0.0126316 0.642105 0.223158 0.0652632 0.0694737 0.0210526 0.917895 0.0252632 0.0357895 0.124211 0.743158 0.00421053 0.128421 0.0547368 0.347368 0.0463158 0.551579 Reverse Complement Motif 0.551579 0.347368 0.0463158 0.0547368 0.124211 0.00421053 0.743158 0.128421 0.0210526 0.0252632 0.917895 0.0357895 0.0694737 0.223158 0.0652632 0.642105 0.0442105 0.896842 0.0463158 0.0126316 0.875789 0.04 0.0168421 0.0673684 0.134737 0.204211 0.543158 0.117895 0.132632 0.111579 0.581053 0.174737 0.122105 0.225263 0.526316 0.126316 0.0778947 0.0273684 0.0568421 0.837895 0.00842105 0.111579 0.829474 0.0505263 0.652632 0.0863158 0.191579 0.0694737 0.04 0.884211 0.0378947 0.0378947 0.0759494 0.816456 0.0168776 0.0907173 0.10148 0.0591966 0.188161 0.651163 0.285106 0.1 0.493617 0.121277 0.176596 0.138298 0.487234 0.197872 0.136752 0.318376 0.369658 0.175214 0.228632 0.350427 0.17094 0.25 0.261242 0.329764 0.256959 0.152034 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 3 Motif 3 Original Motif Original Motif Forward 1 11 0.0627554 Original Motif 0.239437 0.274648 0.0774649 0.408451 0.084507 0.65493 0.147887 0.112676 0.753521 0 0 0.246479 0.309859 0 0.65493 0.035211 0.302817 0.049296 0.584507 0.06338 0.542254 0.007042 0.394366 0.056338 0.457746 0.253521 0.190141 0.098592 0.584507 0.169014 0.232394 0.014085 0.274648 0.62676 0.0985919 0 0.852112 0 0.021127 0.126761 0 0.570423 0.429577 0 0.760563 0 0 0.239437 0.204225 0.021127 0.774648 0 Reverse Complement Motif 0.204225 0.774648 0.021127 0 0.239437 0 0 0.760563 0 0.429577 0.570423 0 0.126761 0 0.021127 0.852112 0.274648 0.0985919 0.62676 0 0.014085 0.169014 0.232394 0.584507 0.098592 0.253521 0.190141 0.457746 0.056338 0.007042 0.394366 0.542254 0.302817 0.584507 0.049296 0.06338 0.309859 0.65493 0 0.035211 0.246479 0 0 0.753521 0.084507 0.147887 0.65493 0.112676 0.408451 0.274648 0.0774649 0.239437 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 59 ESR2 Reverse Complement Original Motif Backward 5 11 0.0646979 Original Motif 0.218487 0.45098 0.176471 0.154062 0.442577 0.142857 0.114846 0.29972 0.521008 0.0420168 0.431373 0.00560224 0.0756303 0 0.770308 0.154062 0.0504202 0.0560224 0.893557 0 0.0364146 0.0532213 0.092437 0.817927 0 1 0 0 0.943978 0.00280112 0 0.0532213 0.137255 0.344538 0.316527 0.201681 0.179272 0.176471 0.417367 0.226891 0.145658 0.170868 0.411765 0.271709 0.0588235 0.092437 0.0672269 0.781513 0.176471 0.070028 0.742297 0.0112045 0.498599 0.277311 0.0532213 0.170868 0.0952381 0.7507 0.00560224 0.148459 0.128852 0.809524 0 0.0616246 0.0756303 0.252101 0 0.672269 0.168067 0.263305 0.380952 0.187675 Reverse Complement Motif 0.168067 0.380952 0.263305 0.187675 0.672269 0.252101 0 0.0756303 0.128852 0 0.809524 0.0616246 0.0952381 0.00560224 0.7507 0.148459 0.170868 0.277311 0.0532213 0.498599 0.176471 0.742297 0.070028 0.0112045 0.781513 0.092437 0.0672269 0.0588235 0.145658 0.411765 0.170868 0.271709 0.179272 0.417367 0.176471 0.226891 0.137255 0.316527 0.344538 0.201681 0.0532213 0.00280112 0 0.943978 0 0 1 0 0.817927 0.0532213 0.092437 0.0364146 0.0504202 0.893557 0.0560224 0 0.0756303 0.770308 0 0.154062 0.00560224 0.0420168 0.431373 0.521008 0.29972 0.142857 0.114846 0.442577 0.218487 0.176471 0.45098 0.154062 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # 5 Motif ID 87 Motif Name TFF1 Original Motif 0.894366 0.00704225 0.056338 0.0422535 0.0211268 0.0422535 0.922535 0.0140845 0.161972 0.0915493 0.661972 0.084507 0.535211 0.140845 0.126761 0.197183 0.00704225 0.957746 0.028169 0.00704225 0.957746 0.00704225 0.0352113 0 0.612676 0.225352 0.0915493 0.0704225 0.732394 0.028169 0.133803 0.105634 0.084507 0.183099 0.676056 0.056338 0.514085 0.15493 0.176056 0.15493 0.225352 0.190141 0.443662 0.140845 0.232394 0.352113 0.232394 0.183099 Reverse Complement Motif 0.232394 0.232394 0.352113 0.183099 0.225352 0.443662 0.190141 0.140845 0.15493 0.15493 0.176056 0.514085 0.084507 0.676056 0.183099 0.056338 0.105634 0.028169 0.133803 0.732394 0.0704225 0.225352 0.0915493 0.612676 0 0.00704225 0.0352113 0.957746 0.00704225 0.028169 0.957746 0.00704225 0.197183 0.140845 0.126761 0.535211 0.161972 0.661972 0.0915493 0.084507 0.0211268 0.922535 0.0422535 0.0140845 0.0422535 0.00704225 0.056338 0.894366 *************************************************************** Best Matches for Top Significant Motif ID 87 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 51 HNF4A Reverse Complement Reverse Complement Forward 2 12 0.0111472 Original Motif 0.41791 0.104478 0.402985 0.0746269 0.0298507 0.0298507 0.835821 0.104478 0.179104 0.0597015 0.522388 0.238806 0.0746269 0.343284 0.298507 0.283582 0.0447761 0.761194 0.0597015 0.134328 0.880597 0.0149254 0.0447761 0.0597015 0.791045 0.0298507 0.149254 0.0298507 0.835821 0.0149254 0.119403 0.0298507 0.0597015 0.0597015 0.865672 0.0149254 0.0895522 0.0298507 0.492537 0.38806 0.0447761 0.328358 0.164179 0.462687 0.0597015 0.731343 0.0746269 0.134328 0.626866 0.104478 0.149254 0.119403 Reverse Complement Motif 0.119403 0.104478 0.149254 0.626866 0.0597015 0.0746269 0.731343 0.134328 0.462687 0.328358 0.164179 0.0447761 0.0895522 0.492537 0.0298507 0.38806 0.0597015 0.865672 0.0597015 0.0149254 0.0298507 0.0149254 0.119403 0.835821 0.0298507 0.0298507 0.149254 0.791045 0.0597015 0.0149254 0.0447761 0.880597 0.0447761 0.0597015 0.761194 0.134328 0.0746269 0.298507 0.343284 0.283582 0.179104 0.522388 0.0597015 0.238806 0.0298507 0.835821 0.0298507 0.104478 0.0746269 0.104478 0.402985 0.41791 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 64 PPARGRXRA Original Motif Original Motif Forward 3 12 0.0210867 Original Motif 0.109685 0.369895 0.373396 0.147025 0.117716 0.193473 0.148019 0.540793 0.453488 0.0267442 0.427907 0.0918605 0.116144 0.00348432 0.779326 0.101045 0.161253 0.0174014 0.781903 0.0394432 0.168213 0.149652 0.458237 0.223898 0.0822711 0.633835 0.207416 0.0764774 0.949015 0.0243337 0.0173812 0.00926999 0.604867 0.0556199 0.312862 0.0266512 0.825231 0.00578704 0.158565 0.0104167 0.0950174 0.0023175 0.88876 0.013905 0.0475087 0.0104287 0.803013 0.13905 0.0254925 0.114716 0.304751 0.555041 0.062645 0.643852 0.167053 0.12645 0.784223 0.0672854 0.0545244 0.0939675 Reverse Complement Motif 0.0939675 0.0672854 0.0545244 0.784223 0.062645 0.167053 0.643852 0.12645 0.555041 0.114716 0.304751 0.0254925 0.0475087 0.803013 0.0104287 0.13905 0.0950174 0.88876 0.0023175 0.013905 0.0104167 0.00578704 0.158565 0.825231 0.0266512 0.0556199 0.312862 0.604867 0.00926999 0.0243337 0.0173812 0.949015 0.0822711 0.207416 0.633835 0.0764774 0.168213 0.458237 0.149652 0.223898 0.161253 0.781903 0.0174014 0.0394432 0.116144 0.779326 0.00348432 0.101045 0.0918605 0.0267442 0.427907 0.453488 0.540793 0.193473 0.148019 0.117716 0.109685 0.373396 0.369895 0.147025 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 59 ESR2 Reverse Complement Reverse Complement Forward 5 12 0.0351633 Original Motif 0.218487 0.45098 0.176471 0.154062 0.442577 0.142857 0.114846 0.29972 0.521008 0.0420168 0.431373 0.00560224 0.0756303 0 0.770308 0.154062 0.0504202 0.0560224 0.893557 0 0.0364146 0.0532213 0.092437 0.817927 0 1 0 0 0.943978 0.00280112 0 0.0532213 0.137255 0.344538 0.316527 0.201681 0.179272 0.176471 0.417367 0.226891 0.145658 0.170868 0.411765 0.271709 0.0588235 0.092437 0.0672269 0.781513 0.176471 0.070028 0.742297 0.0112045 0.498599 0.277311 0.0532213 0.170868 0.0952381 0.7507 0.00560224 0.148459 0.128852 0.809524 0 0.0616246 0.0756303 0.252101 0 0.672269 0.168067 0.263305 0.380952 0.187675 Reverse Complement Motif 0.168067 0.380952 0.263305 0.187675 0.672269 0.252101 0 0.0756303 0.128852 0 0.809524 0.0616246 0.0952381 0.00560224 0.7507 0.148459 0.170868 0.277311 0.0532213 0.498599 0.176471 0.742297 0.070028 0.0112045 0.781513 0.092437 0.0672269 0.0588235 0.145658 0.411765 0.170868 0.271709 0.179272 0.417367 0.176471 0.226891 0.137255 0.316527 0.344538 0.201681 0.0532213 0.00280112 0 0.943978 0 0 1 0 0.817927 0.0532213 0.092437 0.0364146 0.0504202 0.893557 0.0560224 0 0.0756303 0.770308 0 0.154062 0.00560224 0.0420168 0.431373 0.521008 0.29972 0.142857 0.114846 0.442577 0.218487 0.176471 0.45098 0.154062 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 53 ESR1 Reverse Complement Original Motif Backward 9 12 0.039773 Original Motif 0.261242 0.256959 0.329764 0.152034 0.228632 0.17094 0.350427 0.25 0.136752 0.369658 0.318376 0.175214 0.176596 0.487234 0.138298 0.197872 0.285106 0.493617 0.1 0.121277 0.651163 0.0591966 0.188161 0.10148 0.0759494 0.0168776 0.816456 0.0907173 0.04 0.0378947 0.884211 0.0378947 0.0694737 0.0863158 0.191579 0.652632 0.00842105 0.829474 0.111579 0.0505263 0.837895 0.0273684 0.0568421 0.0778947 0.122105 0.526316 0.225263 0.126316 0.132632 0.581053 0.111579 0.174737 0.134737 0.543158 0.204211 0.117895 0.0673684 0.04 0.0168421 0.875789 0.0442105 0.0463158 0.896842 0.0126316 0.642105 0.223158 0.0652632 0.0694737 0.0210526 0.917895 0.0252632 0.0357895 0.124211 0.743158 0.00421053 0.128421 0.0547368 0.347368 0.0463158 0.551579 Reverse Complement Motif 0.551579 0.347368 0.0463158 0.0547368 0.124211 0.00421053 0.743158 0.128421 0.0210526 0.0252632 0.917895 0.0357895 0.0694737 0.223158 0.0652632 0.642105 0.0442105 0.896842 0.0463158 0.0126316 0.875789 0.04 0.0168421 0.0673684 0.134737 0.204211 0.543158 0.117895 0.132632 0.111579 0.581053 0.174737 0.122105 0.225263 0.526316 0.126316 0.0778947 0.0273684 0.0568421 0.837895 0.00842105 0.111579 0.829474 0.0505263 0.652632 0.0863158 0.191579 0.0694737 0.04 0.884211 0.0378947 0.0378947 0.0759494 0.816456 0.0168776 0.0907173 0.10148 0.0591966 0.188161 0.651163 0.285106 0.1 0.493617 0.121277 0.176596 0.138298 0.487234 0.197872 0.136752 0.318376 0.369658 0.175214 0.228632 0.350427 0.17094 0.25 0.261242 0.329764 0.256959 0.152034 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 52 NR2F1 Original Motif Reverse Complement Forward 2 12 0.0472374 Original Motif 0 0 0.153846 0.846154 0.0769231 0 0.923077 0 0.923077 0 0.0769231 0 0.461538 0.538462 0 0 0 1 0 0 0 0.230769 0 0.769231 0 0.153846 0 0.846154 0.0769231 0 0 0.923077 0.153846 0 0.846154 0 0.461538 0.307692 0.230769 0 0.461538 0.384615 0.0769231 0.0769231 0.0769231 0.769231 0.0769231 0.0769231 0.230769 0.461538 0 0.307692 0 0.230769 0.230769 0.538462 Reverse Complement Motif 0.538462 0.230769 0.230769 0 0.230769 0 0.461538 0.307692 0.0769231 0.0769231 0.769231 0.0769231 0.0769231 0.384615 0.0769231 0.461538 0 0.307692 0.230769 0.461538 0.153846 0.846154 0 0 0.923077 0 0 0.0769231 0.846154 0.153846 0 0 0.769231 0.230769 0 0 0 0 1 0 0.461538 0 0.538462 0 0 0 0.0769231 0.923077 0.0769231 0.923077 0 0 0.846154 0 0.153846 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 60 NR1H2RXRA Reverse Complement Reverse Complement Backward 3 12 0.0472884 Original Motif 0.68 0.2 0 0.12 0.68 0.04 0.2 0.08 0.8 0 0.2 0 0 0 1 0 0 0 0.96 0.04 0 0 0 1 0 1 0 0 1 0 0 0 0.96 0 0 0.04 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 1 0 0 1 0 0 0 0.8 0.04 0.08 0.08 0 0.6 0.24 0.16 Reverse Complement Motif 0 0.24 0.6 0.16 0.08 0.04 0.08 0.8 0 0 0 1 0 0 1 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0.04 0 0 0.96 0 0 0 1 0 0 1 0 1 0 0 0 0 0.96 0 0.04 0 1 0 0 0 0 0.2 0.8 0.08 0.04 0.2 0.68 0.12 0.2 0 0.68 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Original Motif Forward 8 12 0.0530556 Original Motif 0.111111 0.746032 0.0634921 0.0793651 0.857143 0.047619 0.047619 0.047619 0.047619 0.857143 0.0793651 0.015873 0.031746 0 0 0.968254 0.031746 0.015873 0.904762 0.047619 0 0 0 1 0.031746 0 0.857143 0.111111 0.396825 0.111111 0.412698 0.0793651 0.031746 0.253968 0.015873 0.698413 0.365079 0 0.634921 0 0.0793651 0.206349 0.047619 0.666667 0.047619 0.936508 0.015873 0 0.952381 0 0.015873 0.031746 0.015873 0.920635 0 0.0634921 0.920635 0 0 0.0793651 0.0634921 0.047619 0.84127 0.047619 0 0 0.015873 0.984127 0.047619 0.015873 0.904762 0.031746 0.015873 0.603175 0.31746 0.0634921 0.396825 0 0.015873 0.587302 0.015873 0.47619 0.428571 0.0793651 0.0634921 0.920635 0 0.015873 0.920635 0.015873 0.047619 0.015873 0.0952381 0.68254 0.0952381 0.126984 0.047619 0.015873 0.0952381 0.84127 Reverse Complement Motif 0.84127 0.015873 0.0952381 0.047619 0.0952381 0.0952381 0.68254 0.126984 0.015873 0.015873 0.047619 0.920635 0.0634921 0 0.920635 0.015873 0.015873 0.428571 0.47619 0.0793651 0.587302 0 0.015873 0.396825 0.015873 0.31746 0.603175 0.0634921 0.047619 0.904762 0.015873 0.031746 0.984127 0 0.015873 0 0.0634921 0.84127 0.047619 0.047619 0.0793651 0 0 0.920635 0.015873 0 0.920635 0.0634921 0.031746 0 0.015873 0.952381 0.047619 0.015873 0.936508 0 0.666667 0.206349 0.047619 0.0793651 0.365079 0.634921 0 0 0.698413 0.253968 0.015873 0.031746 0.396825 0.412698 0.111111 0.0793651 0.031746 0.857143 0 0.111111 1 0 0 0 0.031746 0.904762 0.015873 0.047619 0.968254 0 0 0.031746 0.047619 0.0793651 0.857143 0.015873 0.047619 0.047619 0.047619 0.857143 0.111111 0.0634921 0.746032 0.0793651 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 73 TGGAGCACTGTGACAcCACAGTGg Original Motif Original Motif Backward 1 12 0.0539204 Original Motif 0.0540541 0.0405405 0.0540541 0.851351 0.0405405 0.0135135 0.824324 0.121622 0.0945946 0.135135 0.756757 0.0135135 0.891892 0 0 0.108108 0.0405405 0.0945946 0.810811 0.0540541 0.0810811 0.797297 0.0540541 0.0675676 0.932432 0.027027 0 0.0405405 0.0540541 0.756757 0.135135 0.0540541 0.108108 0.027027 0.0135135 0.851351 0.108108 0 0.851351 0.0405405 0.0135135 0 0.027027 0.959459 0 0.0135135 0.945946 0.0405405 0.905405 0 0.0675676 0.027027 0.0540541 0.837838 0 0.108108 0.945946 0.0135135 0.0405405 0 0.162162 0.5 0.189189 0.148649 0.108108 0.824324 0 0.0675676 0.945946 0 0.0405405 0.0135135 0.0810811 0.837838 0.027027 0.0540541 0.945946 0 0.0135135 0.0405405 0.0540541 0.0675676 0.783784 0.0945946 0.0540541 0.027027 0 0.918919 0.0405405 0.0135135 0.864865 0.0810811 0.148649 0.121622 0.675676 0.0540541 Reverse Complement Motif 0.148649 0.675676 0.121622 0.0540541 0.0405405 0.864865 0.0135135 0.0810811 0.918919 0.027027 0 0.0540541 0.0540541 0.783784 0.0675676 0.0945946 0.0405405 0 0.0135135 0.945946 0.0810811 0.027027 0.837838 0.0540541 0.0135135 0 0.0405405 0.945946 0.108108 0 0.824324 0.0675676 0.162162 0.189189 0.5 0.148649 0 0.0135135 0.0405405 0.945946 0.0540541 0 0.837838 0.108108 0.027027 0 0.0675676 0.905405 0 0.945946 0.0135135 0.0405405 0.959459 0 0.027027 0.0135135 0.108108 0.851351 0 0.0405405 0.851351 0.027027 0.0135135 0.108108 0.0540541 0.135135 0.756757 0.0540541 0.0405405 0.027027 0 0.932432 0.0810811 0.0540541 0.797297 0.0675676 0.0405405 0.810811 0.0945946 0.0540541 0.108108 0 0 0.891892 0.0945946 0.756757 0.135135 0.0135135 0.0405405 0.824324 0.0135135 0.121622 0.851351 0.0405405 0.0540541 0.0540541 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 57 REST Original Motif Original Motif Forward 4 12 0.0558379 Original Motif 0.132621 0.109365 0.230044 0.52797 0.0363181 0.168441 0.0914214 0.70382 0.0475892 0.855354 0.0313087 0.0657483 0.906367 0.0187266 0.0586767 0.0162297 0.021197 0.0274314 0.945137 0.00623441 0.0760125 0.609346 0.201246 0.113396 0.980697 0.00435866 0.00747198 0.00747198 0.001868 0.987547 0.00747198 0.00311333 0.0217933 0.922167 0.0124533 0.0435866 0.568847 0.125234 0.100935 0.204984 0.136534 0.233791 0.0773067 0.552369 0.0243142 0.00436409 0.966958 0.00436409 0.0124688 0.00311721 0.983167 0.00124688 0.877105 0.069869 0.0212102 0.0318153 0.008125 0.8 0.145625 0.04625 0.98375 0.005625 0.004375 0.00625 0.0263488 0.00815558 0.959849 0.00564617 0.128688 0.632141 0.114878 0.124294 0.229899 0.0194724 0.432161 0.318467 0.133962 0.586792 0.200629 0.0786164 0.112579 0.700629 0.0232704 0.163522 Reverse Complement Motif 0.112579 0.0232704 0.700629 0.163522 0.133962 0.200629 0.586792 0.0786164 0.229899 0.432161 0.0194724 0.318467 0.128688 0.114878 0.632141 0.124294 0.0263488 0.959849 0.00815558 0.00564617 0.00625 0.005625 0.004375 0.98375 0.008125 0.145625 0.8 0.04625 0.0318153 0.069869 0.0212102 0.877105 0.0124688 0.983167 0.00311721 0.00124688 0.0243142 0.966958 0.00436409 0.00436409 0.552369 0.233791 0.0773067 0.136534 0.204984 0.125234 0.100935 0.568847 0.0217933 0.0124533 0.922167 0.0435866 0.001868 0.00747198 0.987547 0.00311333 0.00747198 0.00435866 0.00747198 0.980697 0.0760125 0.201246 0.609346 0.113396 0.021197 0.945137 0.0274314 0.00623441 0.0162297 0.0187266 0.0586767 0.906367 0.0475892 0.0313087 0.855354 0.0657483 0.70382 0.168441 0.0914214 0.0363181 0.52797 0.109365 0.230044 0.132621 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 77 AgTGCTCCACTGTGgTGTCACAgT Reverse Complement Original Motif Forward 7 12 0.0609269 Original Motif 0.690141 0.126761 0.0422535 0.140845 0.169014 0.0985915 0.676056 0.056338 0.0422535 0.028169 0.028169 0.901408 0.056338 0 0.774648 0.169014 0.0422535 0.887324 0.0422535 0.028169 0 0.0140845 0 0.985915 0.056338 0.830986 0.0422535 0.0704225 0.028169 0.957746 0.0140845 0 0.957746 0 0.0140845 0.028169 0.084507 0.84507 0.0140845 0.056338 0.028169 0.0140845 0 0.957746 0.140845 0.028169 0.802817 0.028169 0.0140845 0.0140845 0.0140845 0.957746 0.0140845 0 0.929577 0.056338 0.056338 0.15493 0.619718 0.169014 0.0140845 0.028169 0 0.957746 0.056338 0.0140845 0.873239 0.056338 0.0140845 0 0 0.985915 0.0422535 0.929577 0 0.028169 0.957746 0.028169 0 0.0140845 0.028169 0.84507 0.028169 0.0985915 0.873239 0.0140845 0.0422535 0.0704225 0.0985915 0.15493 0.56338 0.183099 0.0704225 0.0140845 0.112676 0.802817 Reverse Complement Motif 0.802817 0.0140845 0.112676 0.0704225 0.0985915 0.56338 0.15493 0.183099 0.0704225 0.0140845 0.0422535 0.873239 0.028169 0.028169 0.84507 0.0985915 0.0140845 0.028169 0 0.957746 0.0422535 0 0.929577 0.028169 0.985915 0 0 0.0140845 0.056338 0.873239 0.0140845 0.056338 0.957746 0.028169 0 0.0140845 0.056338 0.619718 0.15493 0.169014 0.0140845 0.929577 0 0.056338 0.957746 0.0140845 0.0140845 0.0140845 0.140845 0.802817 0.028169 0.028169 0.957746 0.0140845 0 0.028169 0.084507 0.0140845 0.84507 0.056338 0.028169 0 0.0140845 0.957746 0.028169 0.0140845 0.957746 0 0.056338 0.0422535 0.830986 0.0704225 0.985915 0.0140845 0 0 0.0422535 0.0422535 0.887324 0.028169 0.056338 0.774648 0 0.169014 0.901408 0.028169 0.028169 0.0422535 0.169014 0.676056 0.0985915 0.056338 0.140845 0.126761 0.0422535 0.690141 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # 1 Motif ID 37 Motif Name Motif 37 Original Motif 1 0 0 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 1 0 0 0 1 0 Reverse Complement Motif 0 1 0 0 0 1 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 1 *************************************************************** Best Matches for Top Significant Motif ID 37 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 69 atactttggc Original Motif Original Motif Backward 2 7 0 Original Motif 1 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 1 0 0 0 1 0 0 1 0 0 Reverse Complement Motif 0 0 1 0 0 1 0 0 0 1 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 75 wwCCAmAGTCmt Reverse Complement Original Motif Backward 4 7 0.0275974 Original Motif 0.454545 0.0454545 0.227273 0.272727 0.363636 0.136364 0.136364 0.363636 0 1 0 0 0 0.954545 0.0454545 0 1 0 0 0 0.409091 0.590909 0 0 0.909091 0.0454545 0.0454545 0 0 0 1 0 0.0454545 0 0 0.954545 0.0454545 0.909091 0 0.0454545 0.272727 0.318182 0.181818 0.227273 0.181818 0.227273 0.227273 0.363636 Reverse Complement Motif 0.363636 0.227273 0.227273 0.181818 0.272727 0.181818 0.318182 0.227273 0.0454545 0 0.909091 0.0454545 0.954545 0 0 0.0454545 0 1 0 0 0 0.0454545 0.0454545 0.909091 0.409091 0 0.590909 0 0 0 0 1 0 0.0454545 0.954545 0 0 0 1 0 0.363636 0.136364 0.136364 0.363636 0.272727 0.0454545 0.227273 0.454545 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 77 AgTGCTCCACTGTGgTGTCACAgT Reverse Complement Reverse Complement Backward 9 7 0.056841 Original Motif 0.690141 0.126761 0.0422535 0.140845 0.169014 0.0985915 0.676056 0.056338 0.0422535 0.028169 0.028169 0.901408 0.056338 0 0.774648 0.169014 0.0422535 0.887324 0.0422535 0.028169 0 0.0140845 0 0.985915 0.056338 0.830986 0.0422535 0.0704225 0.028169 0.957746 0.0140845 0 0.957746 0 0.0140845 0.028169 0.084507 0.84507 0.0140845 0.056338 0.028169 0.0140845 0 0.957746 0.140845 0.028169 0.802817 0.028169 0.0140845 0.0140845 0.0140845 0.957746 0.0140845 0 0.929577 0.056338 0.056338 0.15493 0.619718 0.169014 0.0140845 0.028169 0 0.957746 0.056338 0.0140845 0.873239 0.056338 0.0140845 0 0 0.985915 0.0422535 0.929577 0 0.028169 0.957746 0.028169 0 0.0140845 0.028169 0.84507 0.028169 0.0985915 0.873239 0.0140845 0.0422535 0.0704225 0.0985915 0.15493 0.56338 0.183099 0.0704225 0.0140845 0.112676 0.802817 Reverse Complement Motif 0.802817 0.0140845 0.112676 0.0704225 0.0985915 0.56338 0.15493 0.183099 0.0704225 0.0140845 0.0422535 0.873239 0.028169 0.028169 0.84507 0.0985915 0.0140845 0.028169 0 0.957746 0.0422535 0 0.929577 0.028169 0.985915 0 0 0.0140845 0.056338 0.873239 0.0140845 0.056338 0.957746 0.028169 0 0.0140845 0.056338 0.619718 0.15493 0.169014 0.0140845 0.929577 0 0.056338 0.957746 0.0140845 0.0140845 0.0140845 0.140845 0.802817 0.028169 0.028169 0.957746 0.0140845 0 0.028169 0.084507 0.0140845 0.84507 0.056338 0.028169 0 0.0140845 0.957746 0.028169 0.0140845 0.957746 0 0.056338 0.0422535 0.830986 0.0704225 0.985915 0.0140845 0 0 0.0422535 0.0422535 0.887324 0.028169 0.056338 0.774648 0 0.169014 0.901408 0.028169 0.028169 0.0422535 0.169014 0.676056 0.0985915 0.056338 0.140845 0.126761 0.0422535 0.690141 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 71 AmTGTGACACCACAGT Original Motif Reverse Complement Backward 10 7 0.0597098 Original Motif 0.703125 0.1875 0.015625 0.09375 0.265625 0.5 0.125 0.109375 0.015625 0.046875 0.03125 0.90625 0.078125 0.015625 0.890625 0.015625 0 0 0 1 0 0.03125 0.90625 0.0625 0.953125 0 0.015625 0.03125 0.046875 0.890625 0 0.0625 0.96875 0 0.015625 0.015625 0.109375 0.78125 0.0625 0.046875 0.0625 0.890625 0 0.046875 0.953125 0 0.03125 0.015625 0.03125 0.78125 0.046875 0.140625 0.9375 0.015625 0.03125 0.015625 0.09375 0.078125 0.734375 0.09375 0.03125 0.078125 0 0.890625 Reverse Complement Motif 0.890625 0.078125 0 0.03125 0.09375 0.734375 0.078125 0.09375 0.015625 0.015625 0.03125 0.9375 0.03125 0.046875 0.78125 0.140625 0.015625 0 0.03125 0.953125 0.0625 0 0.890625 0.046875 0.109375 0.0625 0.78125 0.046875 0.015625 0 0.015625 0.96875 0.046875 0 0.890625 0.0625 0.03125 0 0.015625 0.953125 0 0.90625 0.03125 0.0625 1 0 0 0 0.078125 0.890625 0.015625 0.015625 0.90625 0.046875 0.03125 0.015625 0.265625 0.125 0.5 0.109375 0.09375 0.1875 0.015625 0.703125 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 76 CAcCACAGTGGAGCAct Original Motif Reverse Complement Forward 9 7 0.061942 Original Motif 0.078125 0.734375 0.046875 0.140625 0.828125 0.046875 0.078125 0.046875 0.203125 0.484375 0.15625 0.15625 0.015625 0.984375 0 0 0.96875 0.015625 0.015625 0 0 0.90625 0.015625 0.078125 0.859375 0 0 0.140625 0.03125 0 0.90625 0.0625 0 0.015625 0 0.984375 0 0 0.96875 0.03125 0.046875 0.0625 0.8125 0.078125 0.9375 0.015625 0.015625 0.03125 0.015625 0.03125 0.921875 0.03125 0.125 0.796875 0 0.078125 0.875 0.046875 0.046875 0.03125 0.09375 0.65625 0.09375 0.15625 0.15625 0.078125 0.109375 0.65625 Reverse Complement Motif 0.65625 0.078125 0.109375 0.15625 0.09375 0.09375 0.65625 0.15625 0.03125 0.046875 0.046875 0.875 0.125 0 0.796875 0.078125 0.015625 0.921875 0.03125 0.03125 0.03125 0.015625 0.015625 0.9375 0.046875 0.8125 0.0625 0.078125 0 0.96875 0 0.03125 0.984375 0.015625 0 0 0.03125 0.90625 0 0.0625 0.140625 0 0 0.859375 0 0.015625 0.90625 0.078125 0 0.015625 0.015625 0.96875 0.015625 0 0.984375 0 0.203125 0.15625 0.484375 0.15625 0.046875 0.046875 0.078125 0.828125 0.078125 0.046875 0.734375 0.140625 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 70 CagTGCTCCACTGTGgT Reverse Complement Reverse Complement Forward 2 7 0.0625 Original Motif 0.15 0.7 0.0166667 0.133333 0.65 0.15 0.05 0.15 0.166667 0.116667 0.633333 0.0833333 0.05 0.0333333 0.0666667 0.85 0.05 0 0.833333 0.116667 0.0166667 0.966667 0 0.0166667 0.05 0.0166667 0 0.933333 0.0666667 0.833333 0.0666667 0.0333333 0.0333333 0.966667 0 0 1 0 0 0 0.05 0.916667 0.0166667 0.0166667 0.166667 0 0 0.833333 0.0833333 0.0166667 0.9 0 0 0.0166667 0.0166667 0.966667 0 0.0166667 0.966667 0.0166667 0.116667 0.166667 0.483333 0.233333 0.0666667 0.0833333 0.05 0.8 Reverse Complement Motif 0.8 0.0833333 0.05 0.0666667 0.116667 0.483333 0.166667 0.233333 0 0.966667 0.0166667 0.0166667 0.966667 0.0166667 0.0166667 0 0.0833333 0.9 0.0166667 0 0.833333 0 0 0.166667 0.05 0.0166667 0.916667 0.0166667 0 0 0 1 0.0333333 0 0.966667 0 0.0666667 0.0666667 0.833333 0.0333333 0.933333 0.0166667 0 0.05 0.0166667 0 0.966667 0.0166667 0.05 0.833333 0 0.116667 0.85 0.0333333 0.0666667 0.05 0.166667 0.633333 0.116667 0.0833333 0.15 0.15 0.05 0.65 0.15 0.0166667 0.7 0.133333 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 52 NR2F1 Original Motif Original Motif Forward 4 7 0.0686813 Original Motif 0 0 0.153846 0.846154 0.0769231 0 0.923077 0 0.923077 0 0.0769231 0 0.461538 0.538462 0 0 0 1 0 0 0 0.230769 0 0.769231 0 0.153846 0 0.846154 0.0769231 0 0 0.923077 0.153846 0 0.846154 0 0.461538 0.307692 0.230769 0 0.461538 0.384615 0.0769231 0.0769231 0.0769231 0.769231 0.0769231 0.0769231 0.230769 0.461538 0 0.307692 0 0.230769 0.230769 0.538462 Reverse Complement Motif 0.538462 0.230769 0.230769 0 0.230769 0 0.461538 0.307692 0.0769231 0.0769231 0.769231 0.0769231 0.0769231 0.384615 0.0769231 0.461538 0 0.307692 0.230769 0.461538 0.153846 0.846154 0 0 0.923077 0 0 0.0769231 0.846154 0.153846 0 0 0.769231 0.230769 0 0 0 0 1 0 0.461538 0 0.538462 0 0 0 0.0769231 0.923077 0.0769231 0.923077 0 0 0.846154 0 0.153846 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 73 TGGAGCACTGTGACAcCACAGTGg Reverse Complement Original Motif Forward 16 7 0.0714286 Original Motif 0.0540541 0.0405405 0.0540541 0.851351 0.0405405 0.0135135 0.824324 0.121622 0.0945946 0.135135 0.756757 0.0135135 0.891892 0 0 0.108108 0.0405405 0.0945946 0.810811 0.0540541 0.0810811 0.797297 0.0540541 0.0675676 0.932432 0.027027 0 0.0405405 0.0540541 0.756757 0.135135 0.0540541 0.108108 0.027027 0.0135135 0.851351 0.108108 0 0.851351 0.0405405 0.0135135 0 0.027027 0.959459 0 0.0135135 0.945946 0.0405405 0.905405 0 0.0675676 0.027027 0.0540541 0.837838 0 0.108108 0.945946 0.0135135 0.0405405 0 0.162162 0.5 0.189189 0.148649 0.108108 0.824324 0 0.0675676 0.945946 0 0.0405405 0.0135135 0.0810811 0.837838 0.027027 0.0540541 0.945946 0 0.0135135 0.0405405 0.0540541 0.0675676 0.783784 0.0945946 0.0540541 0.027027 0 0.918919 0.0405405 0.0135135 0.864865 0.0810811 0.148649 0.121622 0.675676 0.0540541 Reverse Complement Motif 0.148649 0.675676 0.121622 0.0540541 0.0405405 0.864865 0.0135135 0.0810811 0.918919 0.027027 0 0.0540541 0.0540541 0.783784 0.0675676 0.0945946 0.0405405 0 0.0135135 0.945946 0.0810811 0.027027 0.837838 0.0540541 0.0135135 0 0.0405405 0.945946 0.108108 0 0.824324 0.0675676 0.162162 0.189189 0.5 0.148649 0 0.0135135 0.0405405 0.945946 0.0540541 0 0.837838 0.108108 0.027027 0 0.0675676 0.905405 0 0.945946 0.0135135 0.0405405 0.959459 0 0.027027 0.0135135 0.108108 0.851351 0 0.0405405 0.851351 0.027027 0.0135135 0.108108 0.0540541 0.135135 0.756757 0.0540541 0.0405405 0.027027 0 0.932432 0.0810811 0.0540541 0.797297 0.0675676 0.0405405 0.810811 0.0945946 0.0540541 0.108108 0 0 0.891892 0.0945946 0.756757 0.135135 0.0135135 0.0405405 0.824324 0.0135135 0.121622 0.851351 0.0405405 0.0540541 0.0540541 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Original Motif Forward 2 7 0.0714286 Original Motif 0.111111 0.746032 0.0634921 0.0793651 0.857143 0.047619 0.047619 0.047619 0.047619 0.857143 0.0793651 0.015873 0.031746 0 0 0.968254 0.031746 0.015873 0.904762 0.047619 0 0 0 1 0.031746 0 0.857143 0.111111 0.396825 0.111111 0.412698 0.0793651 0.031746 0.253968 0.015873 0.698413 0.365079 0 0.634921 0 0.0793651 0.206349 0.047619 0.666667 0.047619 0.936508 0.015873 0 0.952381 0 0.015873 0.031746 0.015873 0.920635 0 0.0634921 0.920635 0 0 0.0793651 0.0634921 0.047619 0.84127 0.047619 0 0 0.015873 0.984127 0.047619 0.015873 0.904762 0.031746 0.015873 0.603175 0.31746 0.0634921 0.396825 0 0.015873 0.587302 0.015873 0.47619 0.428571 0.0793651 0.0634921 0.920635 0 0.015873 0.920635 0.015873 0.047619 0.015873 0.0952381 0.68254 0.0952381 0.126984 0.047619 0.015873 0.0952381 0.84127 Reverse Complement Motif 0.84127 0.015873 0.0952381 0.047619 0.0952381 0.0952381 0.68254 0.126984 0.015873 0.015873 0.047619 0.920635 0.0634921 0 0.920635 0.015873 0.015873 0.428571 0.47619 0.0793651 0.587302 0 0.015873 0.396825 0.015873 0.31746 0.603175 0.0634921 0.047619 0.904762 0.015873 0.031746 0.984127 0 0.015873 0 0.0634921 0.84127 0.047619 0.047619 0.0793651 0 0 0.920635 0.015873 0 0.920635 0.0634921 0.031746 0 0.015873 0.952381 0.047619 0.015873 0.936508 0 0.666667 0.206349 0.047619 0.0793651 0.365079 0.634921 0 0 0.698413 0.253968 0.015873 0.031746 0.396825 0.412698 0.111111 0.0793651 0.031746 0.857143 0 0.111111 1 0 0 0 0.031746 0.904762 0.015873 0.047619 0.968254 0 0 0.031746 0.047619 0.0793651 0.857143 0.015873 0.047619 0.047619 0.047619 0.857143 0.111111 0.0634921 0.746032 0.0793651 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 60 NR1H2RXRA Reverse Complement Original Motif Forward 7 7 0.0728571 Original Motif 0.68 0.2 0 0.12 0.68 0.04 0.2 0.08 0.8 0 0.2 0 0 0 1 0 0 0 0.96 0.04 0 0 0 1 0 1 0 0 1 0 0 0 0.96 0 0 0.04 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 1 0 0 1 0 0 0 0.8 0.04 0.08 0.08 0 0.6 0.24 0.16 Reverse Complement Motif 0 0.24 0.6 0.16 0.08 0.04 0.08 0.8 0 0 0 1 0 0 1 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0.04 0 0 0.96 0 0 0 1 0 0 1 0 1 0 0 0 0 0.96 0 0.04 0 1 0 0 0 0 0.2 0.8 0.08 0.04 0.2 0.68 0.12 0.2 0 0.68 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # 2 Motif ID 50 Motif Name Motif 50 Original Motif 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 0 0.625 0.375 0 0 Reverse Complement Motif 0 0.375 0 0.625 0 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 *************************************************************** Best Matches for Top Significant Motif ID 50 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 21 Motif 21 Reverse Complement Original Motif Backward 5 5 0.01875 Original Motif 0 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 0.5 0.5 0 0 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 0 0.5 0 0.5 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 41 Motif 41 Reverse Complement Reverse Complement Backward 5 5 0.01875 Original Motif 0 0 0 1 0 0 1 0 0 0 1 0 1 0 0 0 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 1 0 0 1 0 0 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 43 Motif 43 Original Motif Original Motif Backward 5 5 0.04375 Original Motif 1 0 0 0 1 0 0 0 0 0 0.5 0.5 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 1 0 0 0 0.5 0 0.5 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 44 Motif 44 Reverse Complement Reverse Complement Backward 4 5 0.05625 Original Motif 1 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0.5 0.5 1 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 1 0 0 0 1 0 0.5 0 0.5 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 19 Motif 19 Reverse Complement Reverse Complement Forward 2 5 0.06875 Original Motif 1 0 0 0 0 0 1 0 1 0 0 0 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 Reverse Complement Motif 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 1 0 1 0 0 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 9 Motif 9 Reverse Complement Original Motif Backward 8 5 0.06875 Original Motif 1 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 1 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 8 Motif 8 Reverse Complement Reverse Complement Forward 6 5 0.06875 Original Motif 0 0 0 1 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0.5 0.5 0 0 1 0 0 0 0 0 1 0 0 0 1 Reverse Complement Motif 1 0 0 0 1 0 0 0 0 0 1 0 0 0.5 0.5 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 1 0 0 1 0 0 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 28 Motif 28 Reverse Complement Reverse Complement Forward 1 5 0.06875 Original Motif 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 57 REST Reverse Complement Reverse Complement Backward 12 5 0.0747947 Original Motif 0.132621 0.109365 0.230044 0.52797 0.0363181 0.168441 0.0914214 0.70382 0.0475892 0.855354 0.0313087 0.0657483 0.906367 0.0187266 0.0586767 0.0162297 0.021197 0.0274314 0.945137 0.00623441 0.0760125 0.609346 0.201246 0.113396 0.980697 0.00435866 0.00747198 0.00747198 0.001868 0.987547 0.00747198 0.00311333 0.0217933 0.922167 0.0124533 0.0435866 0.568847 0.125234 0.100935 0.204984 0.136534 0.233791 0.0773067 0.552369 0.0243142 0.00436409 0.966958 0.00436409 0.0124688 0.00311721 0.983167 0.00124688 0.877105 0.069869 0.0212102 0.0318153 0.008125 0.8 0.145625 0.04625 0.98375 0.005625 0.004375 0.00625 0.0263488 0.00815558 0.959849 0.00564617 0.128688 0.632141 0.114878 0.124294 0.229899 0.0194724 0.432161 0.318467 0.133962 0.586792 0.200629 0.0786164 0.112579 0.700629 0.0232704 0.163522 Reverse Complement Motif 0.112579 0.0232704 0.700629 0.163522 0.133962 0.200629 0.586792 0.0786164 0.229899 0.432161 0.0194724 0.318467 0.128688 0.114878 0.632141 0.124294 0.0263488 0.959849 0.00815558 0.00564617 0.00625 0.005625 0.004375 0.98375 0.008125 0.145625 0.8 0.04625 0.0318153 0.069869 0.0212102 0.877105 0.0124688 0.983167 0.00311721 0.00124688 0.0243142 0.966958 0.00436409 0.00436409 0.552369 0.233791 0.0773067 0.136534 0.204984 0.125234 0.100935 0.568847 0.0217933 0.0124533 0.922167 0.0435866 0.001868 0.00747198 0.987547 0.00311333 0.00747198 0.00435866 0.00747198 0.980697 0.0760125 0.201246 0.609346 0.113396 0.021197 0.945137 0.0274314 0.00623441 0.0162297 0.0187266 0.0586767 0.906367 0.0475892 0.0313087 0.855354 0.0657483 0.70382 0.168441 0.0914214 0.0363181 0.52797 0.109365 0.230044 0.132621 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 23 Motif 23 Reverse Complement Original Motif Backward 5 5 0.075 Original Motif 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0.5 0 0 0.5 0 0 0 1 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0.5 0.5 0 0 1 0 0 0 0 0 0 1 Reverse Complement Motif 1 0 0 0 0 0 0 1 0 0.5 0 0.5 1 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 1 0 0 0 0.5 0 0 0.5 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # 3 Motif ID 61 Motif Name NR4A2 Original Motif 0.615385 0.0769231 0.230769 0.0769231 0.928571 0 0.0714286 0 0 0 0.928571 0.0714286 0.214286 0 0.785714 0 0.142857 0.142857 0 0.714286 0 0.928571 0 0.0714286 1 0 0 0 0.230769 0.615385 0.153846 0 Reverse Complement Motif 0.230769 0.153846 0.615385 0 0 0 0 1 0 0 0.928571 0.0714286 0.714286 0.142857 0 0.142857 0.214286 0.785714 0 0 0 0.928571 0 0.0714286 0 0 0.0714286 0.928571 0.0769231 0.0769231 0.230769 0.615385 *************************************************************** Best Matches for Top Significant Motif ID 61 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 17 Motif 17 Reverse Complement Original Motif Forward 1 8 0.0393171 Original Motif 0 1 0 0 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 1 0 0 Reverse Complement Motif 0 0 1 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 1 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 15 Motif 15 Original Motif Original Motif Forward 2 8 0.040519 Original Motif 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0.5 0 0.5 0 0 0 0 1 0.5 0.5 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 1 1 0 0 0 Reverse Complement Motif 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0.5 0 0.5 1 0 0 0 0 0 0.5 0.5 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 24 Motif 24 Reverse Complement Reverse Complement Forward 4 8 0.0539119 Original Motif 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0.5 0 0 0.5 0 1 0 0 1 0 0 0 0 0 0 1 0.5 0 0 0.5 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 0.5 0 0 0.5 1 0 0 0 0 0 0 1 0 0 1 0 0.5 0 0 0.5 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Original Motif Forward 7 8 0.0557243 Original Motif 0.111111 0.746032 0.0634921 0.0793651 0.857143 0.047619 0.047619 0.047619 0.047619 0.857143 0.0793651 0.015873 0.031746 0 0 0.968254 0.031746 0.015873 0.904762 0.047619 0 0 0 1 0.031746 0 0.857143 0.111111 0.396825 0.111111 0.412698 0.0793651 0.031746 0.253968 0.015873 0.698413 0.365079 0 0.634921 0 0.0793651 0.206349 0.047619 0.666667 0.047619 0.936508 0.015873 0 0.952381 0 0.015873 0.031746 0.015873 0.920635 0 0.0634921 0.920635 0 0 0.0793651 0.0634921 0.047619 0.84127 0.047619 0 0 0.015873 0.984127 0.047619 0.015873 0.904762 0.031746 0.015873 0.603175 0.31746 0.0634921 0.396825 0 0.015873 0.587302 0.015873 0.47619 0.428571 0.0793651 0.0634921 0.920635 0 0.015873 0.920635 0.015873 0.047619 0.015873 0.0952381 0.68254 0.0952381 0.126984 0.047619 0.015873 0.0952381 0.84127 Reverse Complement Motif 0.84127 0.015873 0.0952381 0.047619 0.0952381 0.0952381 0.68254 0.126984 0.015873 0.015873 0.047619 0.920635 0.0634921 0 0.920635 0.015873 0.015873 0.428571 0.47619 0.0793651 0.587302 0 0.015873 0.396825 0.015873 0.31746 0.603175 0.0634921 0.047619 0.904762 0.015873 0.031746 0.984127 0 0.015873 0 0.0634921 0.84127 0.047619 0.047619 0.0793651 0 0 0.920635 0.015873 0 0.920635 0.0634921 0.031746 0 0.015873 0.952381 0.047619 0.015873 0.936508 0 0.666667 0.206349 0.047619 0.0793651 0.365079 0.634921 0 0 0.698413 0.253968 0.015873 0.031746 0.396825 0.412698 0.111111 0.0793651 0.031746 0.857143 0 0.111111 1 0 0 0 0.031746 0.904762 0.015873 0.047619 0.968254 0 0 0.031746 0.047619 0.0793651 0.857143 0.015873 0.047619 0.047619 0.047619 0.857143 0.111111 0.0634921 0.746032 0.0793651 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 35 Motif 35 Reverse Complement Original Motif Forward 2 8 0.0566591 Original Motif 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0.5 0 0.5 0 0 0 1 0 1 0 0 0 0 0 1 0 0 0 1 0 0 1 0 Reverse Complement Motif 0 1 0 0 1 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0.5 0.5 0 1 0 0 1 0 0 0 0 0 0 1 0 1 0 0 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 93 TFM12 Original Motif Original Motif Backward 4 8 0.0584971 Original Motif 0.380282 0.211268 0.373239 0.0352113 0.746479 0.0422535 0.119718 0.0915493 0.28169 0.0492958 0.56338 0.105634 0.21831 0 0.443662 0.338028 0.161972 0.126761 0.598592 0.112676 0.267606 0.528169 0.176056 0.028169 0.640845 0.028169 0.0915493 0.239437 0.0633803 0.084507 0.809859 0.0422535 0.366197 0.246479 0.211268 0.176056 0.471831 0.140845 0.309859 0.0774648 0.373239 0 0.542254 0.084507 0.211268 0.105634 0.605634 0.0774648 0.197183 0.302817 0.478873 0.0211268 0.408451 0.140845 0.387324 0.0633803 0.0985915 0.704225 0.197183 0 0.683099 0.028169 0.0704225 0.21831 0.140845 0.373239 0.485915 0 0.788732 0 0.0633803 0.147887 0 0.169014 0.816901 0.0140845 0.274648 0.295775 0.239437 0.190141 Reverse Complement Motif 0.274648 0.239437 0.295775 0.190141 0 0.816901 0.169014 0.0140845 0.147887 0 0.0633803 0.788732 0.140845 0.485915 0.373239 0 0.21831 0.028169 0.0704225 0.683099 0.0985915 0.197183 0.704225 0 0.0633803 0.140845 0.387324 0.408451 0.197183 0.478873 0.302817 0.0211268 0.211268 0.605634 0.105634 0.0774648 0.373239 0.542254 0 0.084507 0.0774648 0.140845 0.309859 0.471831 0.176056 0.246479 0.211268 0.366197 0.0633803 0.809859 0.084507 0.0422535 0.239437 0.028169 0.0915493 0.640845 0.267606 0.176056 0.528169 0.028169 0.161972 0.598592 0.126761 0.112676 0.21831 0.443662 0 0.338028 0.28169 0.56338 0.0492958 0.105634 0.0915493 0.0422535 0.119718 0.746479 0.0352113 0.211268 0.373239 0.380282 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 73 TGGAGCACTGTGACAcCACAGTGg Original Motif Reverse Complement Forward 8 8 0.060729 Original Motif 0.0540541 0.0405405 0.0540541 0.851351 0.0405405 0.0135135 0.824324 0.121622 0.0945946 0.135135 0.756757 0.0135135 0.891892 0 0 0.108108 0.0405405 0.0945946 0.810811 0.0540541 0.0810811 0.797297 0.0540541 0.0675676 0.932432 0.027027 0 0.0405405 0.0540541 0.756757 0.135135 0.0540541 0.108108 0.027027 0.0135135 0.851351 0.108108 0 0.851351 0.0405405 0.0135135 0 0.027027 0.959459 0 0.0135135 0.945946 0.0405405 0.905405 0 0.0675676 0.027027 0.0540541 0.837838 0 0.108108 0.945946 0.0135135 0.0405405 0 0.162162 0.5 0.189189 0.148649 0.108108 0.824324 0 0.0675676 0.945946 0 0.0405405 0.0135135 0.0810811 0.837838 0.027027 0.0540541 0.945946 0 0.0135135 0.0405405 0.0540541 0.0675676 0.783784 0.0945946 0.0540541 0.027027 0 0.918919 0.0405405 0.0135135 0.864865 0.0810811 0.148649 0.121622 0.675676 0.0540541 Reverse Complement Motif 0.148649 0.675676 0.121622 0.0540541 0.0405405 0.864865 0.0135135 0.0810811 0.918919 0.027027 0 0.0540541 0.0540541 0.783784 0.0675676 0.0945946 0.0405405 0 0.0135135 0.945946 0.0810811 0.027027 0.837838 0.0540541 0.0135135 0 0.0405405 0.945946 0.108108 0 0.824324 0.0675676 0.162162 0.189189 0.5 0.148649 0 0.0135135 0.0405405 0.945946 0.0540541 0 0.837838 0.108108 0.027027 0 0.0675676 0.905405 0 0.945946 0.0135135 0.0405405 0.959459 0 0.027027 0.0135135 0.108108 0.851351 0 0.0405405 0.851351 0.027027 0.0135135 0.108108 0.0540541 0.135135 0.756757 0.0540541 0.0405405 0.027027 0 0.932432 0.0810811 0.0540541 0.797297 0.0675676 0.0405405 0.810811 0.0945946 0.0540541 0.108108 0 0 0.891892 0.0945946 0.756757 0.135135 0.0135135 0.0405405 0.824324 0.0135135 0.121622 0.851351 0.0405405 0.0540541 0.0540541 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 71 AmTGTGACACCACAGT Original Motif Reverse Complement Forward 6 8 0.0645146 Original Motif 0.703125 0.1875 0.015625 0.09375 0.265625 0.5 0.125 0.109375 0.015625 0.046875 0.03125 0.90625 0.078125 0.015625 0.890625 0.015625 0 0 0 1 0 0.03125 0.90625 0.0625 0.953125 0 0.015625 0.03125 0.046875 0.890625 0 0.0625 0.96875 0 0.015625 0.015625 0.109375 0.78125 0.0625 0.046875 0.0625 0.890625 0 0.046875 0.953125 0 0.03125 0.015625 0.03125 0.78125 0.046875 0.140625 0.9375 0.015625 0.03125 0.015625 0.09375 0.078125 0.734375 0.09375 0.03125 0.078125 0 0.890625 Reverse Complement Motif 0.890625 0.078125 0 0.03125 0.09375 0.734375 0.078125 0.09375 0.015625 0.015625 0.03125 0.9375 0.03125 0.046875 0.78125 0.140625 0.015625 0 0.03125 0.953125 0.0625 0 0.890625 0.046875 0.109375 0.0625 0.78125 0.046875 0.015625 0 0.015625 0.96875 0.046875 0 0.890625 0.0625 0.03125 0 0.015625 0.953125 0 0.90625 0.03125 0.0625 1 0 0 0 0.078125 0.890625 0.015625 0.015625 0.90625 0.046875 0.03125 0.015625 0.265625 0.125 0.5 0.109375 0.09375 0.1875 0.015625 0.703125 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 22 Motif 22 Reverse Complement Original Motif Backward 7 8 0.0664462 Original Motif 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 1 Reverse Complement Motif 1 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 18 Motif 18 Reverse Complement Reverse Complement Forward 2 8 0.0674765 Original Motif 0 1 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 1 0 1 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 1 0 0 Reverse Complement Motif 0 0 1 0 0 1 0 0 0 0 0 1 0 0 1 0 0 0 1 0 1 0 0 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 1 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # 4 Motif ID 79 Motif Name cCGCGGrCACG Original Motif 0 0.6 0.2 0.2 0 0.8 0 0.2 0 0 1 0 0 1 0 0 0 0 1 0 0 0.2 0.8 0 0.6 0 0.4 0 0 0.8 0.2 0 0.8 0 0.2 0 0 0.8 0.2 0 0.2 0 0.8 0 Reverse Complement Motif 0.2 0.8 0 0 0 0.2 0.8 0 0 0 0.2 0.8 0 0.2 0.8 0 0 0 0.4 0.6 0 0.8 0.2 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0.8 0.2 0 0.2 0.6 0.2 *************************************************************** Best Matches for Top Significant Motif ID 79 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 88 TFF11 Reverse Complement Reverse Complement Forward 4 11 0.0478408 Original Motif 0.0985915 0.556338 0.246479 0.0985915 0.28169 0.00704225 0.0985915 0.612676 0.00704225 0.0211268 0.971831 0 0.00704225 0.971831 0.00704225 0.0140845 0.00704225 0 0 0.992958 0 0 1 0 0.176056 0.415493 0.232394 0.176056 0.267606 0.197183 0.267606 0.267606 0.119718 0.190141 0.401408 0.288732 0.0985915 0.43662 0.211268 0.253521 0.239437 0.15493 0.183099 0.422535 0.126761 0.140845 0.619718 0.112676 0.190141 0.28169 0.225352 0.302817 0.232394 0.176056 0.373239 0.21831 Reverse Complement Motif 0.232394 0.373239 0.176056 0.21831 0.302817 0.28169 0.225352 0.190141 0.126761 0.619718 0.140845 0.112676 0.422535 0.15493 0.183099 0.239437 0.0985915 0.211268 0.43662 0.253521 0.119718 0.401408 0.190141 0.288732 0.267606 0.197183 0.267606 0.267606 0.176056 0.232394 0.415493 0.176056 0 1 0 0 0.992958 0 0 0.00704225 0.00704225 0.00704225 0.971831 0.0140845 0.00704225 0.971831 0.0211268 0 0.612676 0.00704225 0.0985915 0.28169 0.0985915 0.246479 0.556338 0.0985915 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 57 REST Original Motif Original Motif Backward 4 11 0.0484441 Original Motif 0.132621 0.109365 0.230044 0.52797 0.0363181 0.168441 0.0914214 0.70382 0.0475892 0.855354 0.0313087 0.0657483 0.906367 0.0187266 0.0586767 0.0162297 0.021197 0.0274314 0.945137 0.00623441 0.0760125 0.609346 0.201246 0.113396 0.980697 0.00435866 0.00747198 0.00747198 0.001868 0.987547 0.00747198 0.00311333 0.0217933 0.922167 0.0124533 0.0435866 0.568847 0.125234 0.100935 0.204984 0.136534 0.233791 0.0773067 0.552369 0.0243142 0.00436409 0.966958 0.00436409 0.0124688 0.00311721 0.983167 0.00124688 0.877105 0.069869 0.0212102 0.0318153 0.008125 0.8 0.145625 0.04625 0.98375 0.005625 0.004375 0.00625 0.0263488 0.00815558 0.959849 0.00564617 0.128688 0.632141 0.114878 0.124294 0.229899 0.0194724 0.432161 0.318467 0.133962 0.586792 0.200629 0.0786164 0.112579 0.700629 0.0232704 0.163522 Reverse Complement Motif 0.112579 0.0232704 0.700629 0.163522 0.133962 0.200629 0.586792 0.0786164 0.229899 0.432161 0.0194724 0.318467 0.128688 0.114878 0.632141 0.124294 0.0263488 0.959849 0.00815558 0.00564617 0.00625 0.005625 0.004375 0.98375 0.008125 0.145625 0.8 0.04625 0.0318153 0.069869 0.0212102 0.877105 0.0124688 0.983167 0.00311721 0.00124688 0.0243142 0.966958 0.00436409 0.00436409 0.552369 0.233791 0.0773067 0.136534 0.204984 0.125234 0.100935 0.568847 0.0217933 0.0124533 0.922167 0.0435866 0.001868 0.00747198 0.987547 0.00311333 0.00747198 0.00435866 0.00747198 0.980697 0.0760125 0.201246 0.609346 0.113396 0.021197 0.945137 0.0274314 0.00623441 0.0162297 0.0187266 0.0586767 0.906367 0.0475892 0.0313087 0.855354 0.0657483 0.70382 0.168441 0.0914214 0.0363181 0.52797 0.109365 0.230044 0.132621 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 53 ESR1 Reverse Complement Reverse Complement Backward 3 11 0.0486581 Original Motif 0.261242 0.256959 0.329764 0.152034 0.228632 0.17094 0.350427 0.25 0.136752 0.369658 0.318376 0.175214 0.176596 0.487234 0.138298 0.197872 0.285106 0.493617 0.1 0.121277 0.651163 0.0591966 0.188161 0.10148 0.0759494 0.0168776 0.816456 0.0907173 0.04 0.0378947 0.884211 0.0378947 0.0694737 0.0863158 0.191579 0.652632 0.00842105 0.829474 0.111579 0.0505263 0.837895 0.0273684 0.0568421 0.0778947 0.122105 0.526316 0.225263 0.126316 0.132632 0.581053 0.111579 0.174737 0.134737 0.543158 0.204211 0.117895 0.0673684 0.04 0.0168421 0.875789 0.0442105 0.0463158 0.896842 0.0126316 0.642105 0.223158 0.0652632 0.0694737 0.0210526 0.917895 0.0252632 0.0357895 0.124211 0.743158 0.00421053 0.128421 0.0547368 0.347368 0.0463158 0.551579 Reverse Complement Motif 0.551579 0.347368 0.0463158 0.0547368 0.124211 0.00421053 0.743158 0.128421 0.0210526 0.0252632 0.917895 0.0357895 0.0694737 0.223158 0.0652632 0.642105 0.0442105 0.896842 0.0463158 0.0126316 0.875789 0.04 0.0168421 0.0673684 0.134737 0.204211 0.543158 0.117895 0.132632 0.111579 0.581053 0.174737 0.122105 0.225263 0.526316 0.126316 0.0778947 0.0273684 0.0568421 0.837895 0.00842105 0.111579 0.829474 0.0505263 0.652632 0.0863158 0.191579 0.0694737 0.04 0.884211 0.0378947 0.0378947 0.0759494 0.816456 0.0168776 0.0907173 0.10148 0.0591966 0.188161 0.651163 0.285106 0.1 0.493617 0.121277 0.176596 0.138298 0.487234 0.197872 0.136752 0.318376 0.369658 0.175214 0.228632 0.350427 0.17094 0.25 0.261242 0.329764 0.256959 0.152034 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 66 CTCF Original Motif Original Motif Backward 2 11 0.0588663 Original Motif 0.0952903 0.318729 0.0832421 0.502738 0.182913 0.158817 0.45345 0.204819 0.307777 0.0536692 0.491785 0.146769 0.0613363 0.876232 0.0230011 0.0394304 0.00876232 0.989047 0 0.00219058 0.814896 0.0142388 0.0711939 0.0996714 0.0438116 0.578313 0.365827 0.0120482 0.117325 0.474781 0.0526316 0.355263 0.933114 0.0120614 0.0350877 0.0197368 0.00548847 0 0.991218 0.00329308 0.365532 0.00329308 0.621295 0.00987925 0.0592755 0.0131723 0.553238 0.374314 0.0131868 0 0.978022 0.00879121 0.0615385 0.00879121 0.851648 0.078022 0.114411 0.806381 0.00550055 0.0737074 0.409241 0.0143014 0.557756 0.0187019 0.0903084 0.530837 0.338106 0.0407489 0.128855 0.354626 0.0803965 0.436123 0.442731 0.199339 0.292952 0.064978 Reverse Complement Motif 0.064978 0.199339 0.292952 0.442731 0.436123 0.354626 0.0803965 0.128855 0.0903084 0.338106 0.530837 0.0407489 0.409241 0.557756 0.0143014 0.0187019 0.114411 0.00550055 0.806381 0.0737074 0.0615385 0.851648 0.00879121 0.078022 0.0131868 0.978022 0 0.00879121 0.0592755 0.553238 0.0131723 0.374314 0.365532 0.621295 0.00329308 0.00987925 0.00548847 0.991218 0 0.00329308 0.0197368 0.0120614 0.0350877 0.933114 0.117325 0.0526316 0.474781 0.355263 0.0438116 0.365827 0.578313 0.0120482 0.0996714 0.0142388 0.0711939 0.814896 0.00876232 0 0.989047 0.00219058 0.0613363 0.0230011 0.876232 0.0394304 0.307777 0.491785 0.0536692 0.146769 0.182913 0.45345 0.158817 0.204819 0.502738 0.318729 0.0832421 0.0952903 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 3 Motif 3 Original Motif Original Motif Backward 2 11 0.0597806 Original Motif 0.239437 0.274648 0.0774649 0.408451 0.084507 0.65493 0.147887 0.112676 0.753521 0 0 0.246479 0.309859 0 0.65493 0.035211 0.302817 0.049296 0.584507 0.06338 0.542254 0.007042 0.394366 0.056338 0.457746 0.253521 0.190141 0.098592 0.584507 0.169014 0.232394 0.014085 0.274648 0.62676 0.0985919 0 0.852112 0 0.021127 0.126761 0 0.570423 0.429577 0 0.760563 0 0 0.239437 0.204225 0.021127 0.774648 0 Reverse Complement Motif 0.204225 0.774648 0.021127 0 0.239437 0 0 0.760563 0 0.429577 0.570423 0 0.126761 0 0.021127 0.852112 0.274648 0.0985919 0.62676 0 0.014085 0.169014 0.232394 0.584507 0.098592 0.253521 0.190141 0.457746 0.056338 0.007042 0.394366 0.542254 0.302817 0.584507 0.049296 0.06338 0.309859 0.65493 0 0.035211 0.246479 0 0 0.753521 0.084507 0.147887 0.65493 0.112676 0.408451 0.274648 0.0774649 0.239437 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 2 Motif 2 Reverse Complement Reverse Complement Backward 3 11 0.0624268 Original Motif 0.833333 0 0.166667 0 0 1 0 0 0.875 0 0 0.125 0.083333 0.875 0.041667 0 0.958333 0 0 0.041667 0.125 0.875 0 0 0.833333 0.166667 0 0 0 0.75 0 0.25 0.666667 0 0.208333 0.125 0 0.833333 0.041667 0.125 0.791667 0.125 0.083333 0 0 1 0 0 0.708334 0 0.0833331 0.208333 0 0.958333 0 0.041667 Reverse Complement Motif 0 0 0.958333 0.041667 0.208333 0 0.0833331 0.708334 0 0 1 0 0 0.125 0.083333 0.791667 0 0.041667 0.833333 0.125 0.125 0 0.208333 0.666667 0 0 0.75 0.25 0 0.166667 0 0.833333 0.125 0 0.875 0 0.041667 0 0 0.958333 0.083333 0.041667 0.875 0 0.125 0 0 0.875 0 0 1 0 0 0 0.166667 0.833333 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 93 TFM12 Original Motif Original Motif Backward 5 11 0.0625015 Original Motif 0.380282 0.211268 0.373239 0.0352113 0.746479 0.0422535 0.119718 0.0915493 0.28169 0.0492958 0.56338 0.105634 0.21831 0 0.443662 0.338028 0.161972 0.126761 0.598592 0.112676 0.267606 0.528169 0.176056 0.028169 0.640845 0.028169 0.0915493 0.239437 0.0633803 0.084507 0.809859 0.0422535 0.366197 0.246479 0.211268 0.176056 0.471831 0.140845 0.309859 0.0774648 0.373239 0 0.542254 0.084507 0.211268 0.105634 0.605634 0.0774648 0.197183 0.302817 0.478873 0.0211268 0.408451 0.140845 0.387324 0.0633803 0.0985915 0.704225 0.197183 0 0.683099 0.028169 0.0704225 0.21831 0.140845 0.373239 0.485915 0 0.788732 0 0.0633803 0.147887 0 0.169014 0.816901 0.0140845 0.274648 0.295775 0.239437 0.190141 Reverse Complement Motif 0.274648 0.239437 0.295775 0.190141 0 0.816901 0.169014 0.0140845 0.147887 0 0.0633803 0.788732 0.140845 0.485915 0.373239 0 0.21831 0.028169 0.0704225 0.683099 0.0985915 0.197183 0.704225 0 0.0633803 0.140845 0.387324 0.408451 0.197183 0.478873 0.302817 0.0211268 0.211268 0.605634 0.105634 0.0774648 0.373239 0.542254 0 0.084507 0.0774648 0.140845 0.309859 0.471831 0.176056 0.246479 0.211268 0.366197 0.0633803 0.809859 0.084507 0.0422535 0.239437 0.028169 0.0915493 0.640845 0.267606 0.176056 0.528169 0.028169 0.161972 0.598592 0.126761 0.112676 0.21831 0.443662 0 0.338028 0.28169 0.56338 0.0492958 0.105634 0.0915493 0.0422535 0.119718 0.746479 0.0352113 0.211268 0.373239 0.380282 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 89 TFM1 Original Motif Original Motif Forward 6 11 0.0628056 Original Motif 0.107143 0.642857 0 0.25 0.785714 0.0357143 0.0714286 0.107143 0.25 0.714286 0.0357143 0 1 0 0 0 0 0.892857 0.107143 0 0.821429 0.142857 0 0.0357143 0.107143 0.785714 0.0714286 0.0357143 0.857143 0 0 0.142857 0 0.928571 0.0357143 0.0357143 0.785714 0 0.0714286 0.142857 0.142857 0.571429 0 0.285714 0.5 0 0.214286 0.285714 0 0.821429 0.178571 0 0.75 0.178571 0 0.0714286 0.0357143 0.821429 0 0.142857 0.857143 0.0357143 0.107143 0 0.178571 0.642857 0.178571 0 0.964286 0 0.0357143 0 Reverse Complement Motif 0 0 0.0357143 0.964286 0.178571 0.178571 0.642857 0 0 0.0357143 0.107143 0.857143 0.0357143 0 0.821429 0.142857 0.0714286 0.178571 0 0.75 0 0.178571 0.821429 0 0.285714 0 0.214286 0.5 0.142857 0 0.571429 0.285714 0.142857 0 0.0714286 0.785714 0 0.0357143 0.928571 0.0357143 0.142857 0 0 0.857143 0.107143 0.0714286 0.785714 0.0357143 0.0357143 0.142857 0 0.821429 0 0.107143 0.892857 0 0 0 0 1 0.25 0.0357143 0.714286 0 0.107143 0.0357143 0.0714286 0.785714 0.107143 0 0.642857 0.25 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 64 PPARGRXRA Reverse Complement Reverse Complement Backward 2 11 0.0629476 Original Motif 0.109685 0.369895 0.373396 0.147025 0.117716 0.193473 0.148019 0.540793 0.453488 0.0267442 0.427907 0.0918605 0.116144 0.00348432 0.779326 0.101045 0.161253 0.0174014 0.781903 0.0394432 0.168213 0.149652 0.458237 0.223898 0.0822711 0.633835 0.207416 0.0764774 0.949015 0.0243337 0.0173812 0.00926999 0.604867 0.0556199 0.312862 0.0266512 0.825231 0.00578704 0.158565 0.0104167 0.0950174 0.0023175 0.88876 0.013905 0.0475087 0.0104287 0.803013 0.13905 0.0254925 0.114716 0.304751 0.555041 0.062645 0.643852 0.167053 0.12645 0.784223 0.0672854 0.0545244 0.0939675 Reverse Complement Motif 0.0939675 0.0672854 0.0545244 0.784223 0.062645 0.167053 0.643852 0.12645 0.555041 0.114716 0.304751 0.0254925 0.0475087 0.803013 0.0104287 0.13905 0.0950174 0.88876 0.0023175 0.013905 0.0104167 0.00578704 0.158565 0.825231 0.0266512 0.0556199 0.312862 0.604867 0.00926999 0.0243337 0.0173812 0.949015 0.0822711 0.207416 0.633835 0.0764774 0.168213 0.458237 0.149652 0.223898 0.161253 0.781903 0.0174014 0.0394432 0.116144 0.779326 0.00348432 0.101045 0.0918605 0.0267442 0.427907 0.453488 0.540793 0.193473 0.148019 0.117716 0.109685 0.373396 0.369895 0.147025 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 92 TFM11 Original Motif Original Motif Backward 3 11 0.0634175 Original Motif 0 0.769231 0 0.230769 0.730769 0 0.192308 0.0769231 0.346154 0.576923 0.0384615 0.0384615 0.923077 0.0769231 0 0 0.153846 0.769231 0.0769231 0 0.923077 0.0769231 0 0 0 0.807692 0.0769231 0.115385 0.846154 0.153846 0 0 0.115385 0.846154 0.0384615 0 0.807692 0 0 0.192308 0.0384615 0.884615 0 0.0769231 0.692308 0 0.0769231 0.230769 0.0769231 0.538462 0 0.384615 0.461538 0.0384615 0.269231 0.230769 0 0.807692 0.192308 0 0.807692 0.153846 0 0.0384615 0.0769231 0.692308 0 0.230769 0.807692 0 0.192308 0 0.0769231 0.730769 0.115385 0.0769231 0.923077 0 0 0.0769231 Reverse Complement Motif 0.0769231 0 0 0.923077 0.0769231 0.115385 0.730769 0.0769231 0 0 0.192308 0.807692 0.0769231 0 0.692308 0.230769 0.0384615 0.153846 0 0.807692 0 0.192308 0.807692 0 0.230769 0.0384615 0.269231 0.461538 0.0769231 0 0.538462 0.384615 0.230769 0 0.0769231 0.692308 0.0384615 0 0.884615 0.0769231 0.192308 0 0 0.807692 0.115385 0.0384615 0.846154 0 0 0.153846 0 0.846154 0 0.0769231 0.807692 0.115385 0 0.0769231 0 0.923077 0.153846 0.0769231 0.769231 0 0 0.0769231 0 0.923077 0.346154 0.0384615 0.576923 0.0384615 0.0769231 0 0.192308 0.730769 0 0 0.769231 0.230769 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- **************************************************************************************************************************************************************************************************** **************************************************************** Significant Motifs - Global and Local Matching (Highest to Lowest) **************************************************************** Dataset # 3 Motif ID 55 Motif Name ZEB1 Original Motif 0.0243902 0.829268 0.0243902 0.121951 0.926829 0 0.0487805 0.0243902 0 0.97561 0.0243902 0 0 0.926829 0.0731707 0 0 0.0243902 0 0.97561 0.243902 0.0243902 0.390244 0.341463 Reverse Complement Motif 0.243902 0.390244 0.0243902 0.341463 0.97561 0.0243902 0 0 0 0.0731707 0.926829 0 0 0.0243902 0.97561 0 0.0243902 0 0.0487805 0.926829 0.0243902 0.0243902 0.829268 0.121951 ******************************************************************* Best Matches for Significant Motif ID 55 (Highest to Lowest) ******************************************************************* Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 2 47 Motif 47 Original Motif Original Motif Backward 6 6 0 Original Motif 0 0.5 0 0.5 0 0 1 0 0 1 0 0 0 1 0 0 0.714286 0.285714 0 0 0 0.857143 0 0.142857 0 1 0 0 0 0.142857 0.142857 0.714286 0.357143 0 0.357143 0.285714 0 0.428571 0.571429 0 0.142857 0.071429 0 0.785714 0 0 1 0 0.071429 0 0.785714 0.142857 0.142857 0.428571 0 0.428571 Reverse Complement Motif 0.142857 0 0.428571 0.428571 0.071429 0.785714 0 0.142857 0 1 0 0 0.785714 0.071429 0 0.142857 0 0.571429 0.428571 0 0.285714 0 0.357143 0.357143 0.714286 0.142857 0.142857 0 0 0 1 0 0 0 0.857143 0.142857 0 0.285714 0 0.714286 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0.5 0.5 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 5 Motif 5 Original Motif Original Motif Backward 3 6 0.00902841 Original Motif 0 0.8125 0.125 0.0625 0.375 0 0 0.625 0.0625 0 0.9375 0 0.5625 0.125 0.1875 0.125 0 0 1 0 0.0625 0.9375 0 0 0 0.9375 0.0625 0 1 0 0 0 0 0.625 0 0.375 0 0.9375 0.0625 0 0 0 0 1 0 0.5625 0 0.4375 0 0.125 0.125 0.75 0.0625 0.625 0 0.3125 Reverse Complement Motif 0.0625 0 0.625 0.3125 0.75 0.125 0.125 0 0 0 0.5625 0.4375 1 0 0 0 0 0.0625 0.9375 0 0 0 0.625 0.375 0 0 0 1 0 0.0625 0.9375 0 0.0625 0 0.9375 0 0 1 0 0 0.125 0.125 0.1875 0.5625 0.0625 0.9375 0 0 0.625 0 0 0.375 0 0.125 0.8125 0.0625 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 66 CTCF Reverse Complement Original Motif Forward 8 6 0.0118423 Original Motif 0.0952903 0.318729 0.0832421 0.502738 0.182913 0.158817 0.45345 0.204819 0.307777 0.0536692 0.491785 0.146769 0.0613363 0.876232 0.0230011 0.0394304 0.00876232 0.989047 0 0.00219058 0.814896 0.0142388 0.0711939 0.0996714 0.0438116 0.578313 0.365827 0.0120482 0.117325 0.474781 0.0526316 0.355263 0.933114 0.0120614 0.0350877 0.0197368 0.00548847 0 0.991218 0.00329308 0.365532 0.00329308 0.621295 0.00987925 0.0592755 0.0131723 0.553238 0.374314 0.0131868 0 0.978022 0.00879121 0.0615385 0.00879121 0.851648 0.078022 0.114411 0.806381 0.00550055 0.0737074 0.409241 0.0143014 0.557756 0.0187019 0.0903084 0.530837 0.338106 0.0407489 0.128855 0.354626 0.0803965 0.436123 0.442731 0.199339 0.292952 0.064978 Reverse Complement Motif 0.064978 0.199339 0.292952 0.442731 0.436123 0.354626 0.0803965 0.128855 0.0903084 0.338106 0.530837 0.0407489 0.409241 0.557756 0.0143014 0.0187019 0.114411 0.00550055 0.806381 0.0737074 0.0615385 0.851648 0.00879121 0.078022 0.0131868 0.978022 0 0.00879121 0.0592755 0.553238 0.0131723 0.374314 0.365532 0.621295 0.00329308 0.00987925 0.00548847 0.991218 0 0.00329308 0.0197368 0.0120614 0.0350877 0.933114 0.117325 0.0526316 0.474781 0.355263 0.0438116 0.365827 0.578313 0.0120482 0.0996714 0.0142388 0.0711939 0.814896 0.00876232 0 0.989047 0.00219058 0.0613363 0.0230011 0.876232 0.0394304 0.307777 0.491785 0.0536692 0.146769 0.182913 0.45345 0.158817 0.204819 0.502738 0.318729 0.0832421 0.0952903 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 62 RORA_1 Original Motif Reverse Complement Forward 2 6 0.0187312 Original Motif 0.6 0.04 0.08 0.28 0.36 0.04 0 0.6 0.24 0.48 0.16 0.12 0.44 0.08 0.2 0.28 0.84 0 0.16 0 0 0 1 0 0 0 1 0 0 0 0 1 0 1 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 1 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0.16 0.84 0.28 0.08 0.2 0.44 0.24 0.16 0.48 0.12 0.6 0.04 0 0.36 0.28 0.04 0.08 0.6 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 57 REST Reverse Complement Reverse Complement Forward 11 6 0.0189156 Original Motif 0.132621 0.109365 0.230044 0.52797 0.0363181 0.168441 0.0914214 0.70382 0.0475892 0.855354 0.0313087 0.0657483 0.906367 0.0187266 0.0586767 0.0162297 0.021197 0.0274314 0.945137 0.00623441 0.0760125 0.609346 0.201246 0.113396 0.980697 0.00435866 0.00747198 0.00747198 0.001868 0.987547 0.00747198 0.00311333 0.0217933 0.922167 0.0124533 0.0435866 0.568847 0.125234 0.100935 0.204984 0.136534 0.233791 0.0773067 0.552369 0.0243142 0.00436409 0.966958 0.00436409 0.0124688 0.00311721 0.983167 0.00124688 0.877105 0.069869 0.0212102 0.0318153 0.008125 0.8 0.145625 0.04625 0.98375 0.005625 0.004375 0.00625 0.0263488 0.00815558 0.959849 0.00564617 0.128688 0.632141 0.114878 0.124294 0.229899 0.0194724 0.432161 0.318467 0.133962 0.586792 0.200629 0.0786164 0.112579 0.700629 0.0232704 0.163522 Reverse Complement Motif 0.112579 0.0232704 0.700629 0.163522 0.133962 0.200629 0.586792 0.0786164 0.229899 0.432161 0.0194724 0.318467 0.128688 0.114878 0.632141 0.124294 0.0263488 0.959849 0.00815558 0.00564617 0.00625 0.005625 0.004375 0.98375 0.008125 0.145625 0.8 0.04625 0.0318153 0.069869 0.0212102 0.877105 0.0124688 0.983167 0.00311721 0.00124688 0.0243142 0.966958 0.00436409 0.00436409 0.552369 0.233791 0.0773067 0.136534 0.204984 0.125234 0.100935 0.568847 0.0217933 0.0124533 0.922167 0.0435866 0.001868 0.00747198 0.987547 0.00311333 0.00747198 0.00435866 0.00747198 0.980697 0.0760125 0.201246 0.609346 0.113396 0.021197 0.945137 0.0274314 0.00623441 0.0162297 0.0187266 0.0586767 0.906367 0.0475892 0.0313087 0.855354 0.0657483 0.70382 0.168441 0.0914214 0.0363181 0.52797 0.109365 0.230044 0.132621 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 54 Esrrb Reverse Complement Original Motif Backward 6 6 0.0248883 Original Motif 0.290198 0.220264 0.2712 0.218337 0.184941 0.22781 0.376477 0.210772 0.115226 0.332236 0.331687 0.22085 0.0709589 0.342466 0.12274 0.463836 0.0848618 0.729264 0.17164 0.0142349 0.909737 0.00875274 0.0678337 0.0136761 0.975656 0.000547046 0.0164114 0.00738512 0.00875753 0.00136836 0.98139 0.00848385 0.00575027 0.00328587 0.986309 0.00465498 0.049904 0.0126131 0.0669043 0.870579 0.00247253 0.927473 0.0467033 0.0233516 0.951569 0.00550358 0.0354981 0.00742983 Reverse Complement Motif 0.00742983 0.00550358 0.0354981 0.951569 0.00247253 0.0467033 0.927473 0.0233516 0.870579 0.0126131 0.0669043 0.049904 0.00575027 0.986309 0.00328587 0.00465498 0.00875753 0.98139 0.00136836 0.00848385 0.00738512 0.000547046 0.0164114 0.975656 0.0136761 0.00875274 0.0678337 0.909737 0.0848618 0.17164 0.729264 0.0142349 0.463836 0.342466 0.12274 0.0709589 0.115226 0.331687 0.332236 0.22085 0.184941 0.376477 0.22781 0.210772 0.218337 0.220264 0.2712 0.290198 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 60 NR1H2RXRA Original Motif Reverse Complement Backward 2 6 0.0278775 Original Motif 0.68 0.2 0 0.12 0.68 0.04 0.2 0.08 0.8 0 0.2 0 0 0 1 0 0 0 0.96 0.04 0 0 0 1 0 1 0 0 1 0 0 0 0.96 0 0 0.04 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 1 0 0 1 0 0 0 0.8 0.04 0.08 0.08 0 0.6 0.24 0.16 Reverse Complement Motif 0 0.24 0.6 0.16 0.08 0.04 0.08 0.8 0 0 0 1 0 0 1 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0.04 0 0 0.96 0 0 0 1 0 0 1 0 1 0 0 0 0 0.96 0 0.04 0 1 0 0 0 0 0.2 0.8 0.08 0.04 0.2 0.68 0.12 0.2 0 0.68 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 46 Motif 46 Original Motif Reverse Complement Backward 8 6 0.0285279 Original Motif 1 0 0 0 0 0 0 1 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 1 0 0 0.5 0 0.5 1 0 0 0 0 0 0 1 1 0 0 0 Reverse Complement Motif 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0.5 0.5 0 1 0 0 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 64 PPARGRXRA Original Motif Reverse Complement Forward 2 6 0.0310859 Original Motif 0.109685 0.369895 0.373396 0.147025 0.117716 0.193473 0.148019 0.540793 0.453488 0.0267442 0.427907 0.0918605 0.116144 0.00348432 0.779326 0.101045 0.161253 0.0174014 0.781903 0.0394432 0.168213 0.149652 0.458237 0.223898 0.0822711 0.633835 0.207416 0.0764774 0.949015 0.0243337 0.0173812 0.00926999 0.604867 0.0556199 0.312862 0.0266512 0.825231 0.00578704 0.158565 0.0104167 0.0950174 0.0023175 0.88876 0.013905 0.0475087 0.0104287 0.803013 0.13905 0.0254925 0.114716 0.304751 0.555041 0.062645 0.643852 0.167053 0.12645 0.784223 0.0672854 0.0545244 0.0939675 Reverse Complement Motif 0.0939675 0.0672854 0.0545244 0.784223 0.062645 0.167053 0.643852 0.12645 0.555041 0.114716 0.304751 0.0254925 0.0475087 0.803013 0.0104287 0.13905 0.0950174 0.88876 0.0023175 0.013905 0.0104167 0.00578704 0.158565 0.825231 0.0266512 0.0556199 0.312862 0.604867 0.00926999 0.0243337 0.0173812 0.949015 0.0822711 0.207416 0.633835 0.0764774 0.168213 0.458237 0.149652 0.223898 0.161253 0.781903 0.0174014 0.0394432 0.116144 0.779326 0.00348432 0.101045 0.0918605 0.0267442 0.427907 0.453488 0.540793 0.193473 0.148019 0.117716 0.109685 0.373396 0.369895 0.147025 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 61 NR4A2 Original Motif Reverse Complement Forward 3 6 0.0334919 Original Motif 0.615385 0.0769231 0.230769 0.0769231 0.928571 0 0.0714286 0 0 0 0.928571 0.0714286 0.214286 0 0.785714 0 0.142857 0.142857 0 0.714286 0 0.928571 0 0.0714286 1 0 0 0 0.230769 0.615385 0.153846 0 Reverse Complement Motif 0.230769 0.153846 0.615385 0 0 0 0 1 0 0 0.928571 0.0714286 0.714286 0.142857 0 0.142857 0.214286 0.785714 0 0 0 0.928571 0 0.0714286 0 0 0.0714286 0.928571 0.0769231 0.0769231 0.230769 0.615385 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # 5 Motif ID 84 Motif Name TFW3 Original Motif 0.117363 0.130225 0.654341 0.0980707 0.0707395 0.92926 0 0 0.779743 0.104502 0 0.115756 0 0.916399 0.0836013 0 0.12701 0 0 0.87299 0 0 1 0 Reverse Complement Motif 0 1 0 0 0.87299 0 0 0.12701 0 0.0836013 0.916399 0 0.115756 0.104502 0 0.779743 0.0707395 0 0.92926 0 0.117363 0.654341 0.130225 0.0980707 ******************************************************************* Best Matches for Significant Motif ID 84 (Highest to Lowest) ******************************************************************* Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 67 TgTGgTGTCACAGTGCTCC Reverse Complement Original Motif Forward 4 6 0 Original Motif 0.111111 0.0833333 0.0555556 0.75 0.125 0.0972222 0.652778 0.125 0.0416667 0.0972222 0.0277778 0.833333 0.0277778 0.0277778 0.791667 0.152778 0.0555556 0.166667 0.652778 0.125 0 0.0416667 0.0138889 0.944444 0.0416667 0 0.888889 0.0694444 0.0277778 0.0277778 0 0.944444 0.0416667 0.944444 0.0138889 0 0.916667 0.0277778 0 0.0555556 0.0694444 0.875 0 0.0555556 0.833333 0.0138889 0.0138889 0.138889 0.0416667 0.0694444 0.819444 0.0694444 0.0277778 0.0277778 0.0277778 0.916667 0.0694444 0.0138889 0.847222 0.0694444 0.0694444 0.777778 0.0277778 0.125 0.0555556 0.0416667 0.0277778 0.875 0.0416667 0.708333 0.125 0.125 0.111111 0.819444 0.0555556 0.0138889 Reverse Complement Motif 0.111111 0.0555556 0.819444 0.0138889 0.0416667 0.125 0.708333 0.125 0.875 0.0416667 0.0277778 0.0555556 0.0694444 0.0277778 0.777778 0.125 0.0694444 0.847222 0.0138889 0.0694444 0.916667 0.0277778 0.0277778 0.0277778 0.0416667 0.819444 0.0694444 0.0694444 0.138889 0.0138889 0.0138889 0.833333 0.0694444 0 0.875 0.0555556 0.0555556 0.0277778 0 0.916667 0.0416667 0.0138889 0.944444 0 0.944444 0.0277778 0 0.0277778 0.0416667 0.888889 0 0.0694444 0.944444 0.0416667 0.0138889 0 0.0555556 0.652778 0.166667 0.125 0.0277778 0.791667 0.0277778 0.152778 0.833333 0.0972222 0.0277778 0.0416667 0.125 0.652778 0.0972222 0.125 0.75 0.0833333 0.0555556 0.111111 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Reverse Complement Backward 7 6 0.000794289 Original Motif 0.111111 0.746032 0.0634921 0.0793651 0.857143 0.047619 0.047619 0.047619 0.047619 0.857143 0.0793651 0.015873 0.031746 0 0 0.968254 0.031746 0.015873 0.904762 0.047619 0 0 0 1 0.031746 0 0.857143 0.111111 0.396825 0.111111 0.412698 0.0793651 0.031746 0.253968 0.015873 0.698413 0.365079 0 0.634921 0 0.0793651 0.206349 0.047619 0.666667 0.047619 0.936508 0.015873 0 0.952381 0 0.015873 0.031746 0.015873 0.920635 0 0.0634921 0.920635 0 0 0.0793651 0.0634921 0.047619 0.84127 0.047619 0 0 0.015873 0.984127 0.047619 0.015873 0.904762 0.031746 0.015873 0.603175 0.31746 0.0634921 0.396825 0 0.015873 0.587302 0.015873 0.47619 0.428571 0.0793651 0.0634921 0.920635 0 0.015873 0.920635 0.015873 0.047619 0.015873 0.0952381 0.68254 0.0952381 0.126984 0.047619 0.015873 0.0952381 0.84127 Reverse Complement Motif 0.84127 0.015873 0.0952381 0.047619 0.0952381 0.0952381 0.68254 0.126984 0.015873 0.015873 0.047619 0.920635 0.0634921 0 0.920635 0.015873 0.015873 0.428571 0.47619 0.0793651 0.587302 0 0.015873 0.396825 0.015873 0.31746 0.603175 0.0634921 0.047619 0.904762 0.015873 0.031746 0.984127 0 0.015873 0 0.0634921 0.84127 0.047619 0.047619 0.0793651 0 0 0.920635 0.015873 0 0.920635 0.0634921 0.031746 0 0.015873 0.952381 0.047619 0.015873 0.936508 0 0.666667 0.206349 0.047619 0.0793651 0.365079 0.634921 0 0 0.698413 0.253968 0.015873 0.031746 0.396825 0.412698 0.111111 0.0793651 0.031746 0.857143 0 0.111111 1 0 0 0 0.031746 0.904762 0.015873 0.047619 0.968254 0 0 0.031746 0.047619 0.0793651 0.857143 0.015873 0.047619 0.047619 0.047619 0.857143 0.111111 0.0634921 0.746032 0.0793651 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 73 TGGAGCACTGTGACAcCACAGTGg Reverse Complement Reverse Complement Backward 5 6 0.00482436 Original Motif 0.0540541 0.0405405 0.0540541 0.851351 0.0405405 0.0135135 0.824324 0.121622 0.0945946 0.135135 0.756757 0.0135135 0.891892 0 0 0.108108 0.0405405 0.0945946 0.810811 0.0540541 0.0810811 0.797297 0.0540541 0.0675676 0.932432 0.027027 0 0.0405405 0.0540541 0.756757 0.135135 0.0540541 0.108108 0.027027 0.0135135 0.851351 0.108108 0 0.851351 0.0405405 0.0135135 0 0.027027 0.959459 0 0.0135135 0.945946 0.0405405 0.905405 0 0.0675676 0.027027 0.0540541 0.837838 0 0.108108 0.945946 0.0135135 0.0405405 0 0.162162 0.5 0.189189 0.148649 0.108108 0.824324 0 0.0675676 0.945946 0 0.0405405 0.0135135 0.0810811 0.837838 0.027027 0.0540541 0.945946 0 0.0135135 0.0405405 0.0540541 0.0675676 0.783784 0.0945946 0.0540541 0.027027 0 0.918919 0.0405405 0.0135135 0.864865 0.0810811 0.148649 0.121622 0.675676 0.0540541 Reverse Complement Motif 0.148649 0.675676 0.121622 0.0540541 0.0405405 0.864865 0.0135135 0.0810811 0.918919 0.027027 0 0.0540541 0.0540541 0.783784 0.0675676 0.0945946 0.0405405 0 0.0135135 0.945946 0.0810811 0.027027 0.837838 0.0540541 0.0135135 0 0.0405405 0.945946 0.108108 0 0.824324 0.0675676 0.162162 0.189189 0.5 0.148649 0 0.0135135 0.0405405 0.945946 0.0540541 0 0.837838 0.108108 0.027027 0 0.0675676 0.905405 0 0.945946 0.0135135 0.0405405 0.959459 0 0.027027 0.0135135 0.108108 0.851351 0 0.0405405 0.851351 0.027027 0.0135135 0.108108 0.0540541 0.135135 0.756757 0.0540541 0.0405405 0.027027 0 0.932432 0.0810811 0.0540541 0.797297 0.0675676 0.0405405 0.810811 0.0945946 0.0540541 0.108108 0 0 0.891892 0.0945946 0.756757 0.135135 0.0135135 0.0405405 0.824324 0.0135135 0.121622 0.851351 0.0405405 0.0540541 0.0540541 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 76 CAcCACAGTGGAGCAct Original Motif Reverse Complement Backward 7 6 0.0201914 Original Motif 0.078125 0.734375 0.046875 0.140625 0.828125 0.046875 0.078125 0.046875 0.203125 0.484375 0.15625 0.15625 0.015625 0.984375 0 0 0.96875 0.015625 0.015625 0 0 0.90625 0.015625 0.078125 0.859375 0 0 0.140625 0.03125 0 0.90625 0.0625 0 0.015625 0 0.984375 0 0 0.96875 0.03125 0.046875 0.0625 0.8125 0.078125 0.9375 0.015625 0.015625 0.03125 0.015625 0.03125 0.921875 0.03125 0.125 0.796875 0 0.078125 0.875 0.046875 0.046875 0.03125 0.09375 0.65625 0.09375 0.15625 0.15625 0.078125 0.109375 0.65625 Reverse Complement Motif 0.65625 0.078125 0.109375 0.15625 0.09375 0.09375 0.65625 0.15625 0.03125 0.046875 0.046875 0.875 0.125 0 0.796875 0.078125 0.015625 0.921875 0.03125 0.03125 0.03125 0.015625 0.015625 0.9375 0.046875 0.8125 0.0625 0.078125 0 0.96875 0 0.03125 0.984375 0.015625 0 0 0.03125 0.90625 0 0.0625 0.140625 0 0 0.859375 0 0.015625 0.90625 0.078125 0 0.015625 0.015625 0.96875 0.015625 0 0.984375 0 0.203125 0.15625 0.484375 0.15625 0.046875 0.046875 0.078125 0.828125 0.078125 0.046875 0.734375 0.140625 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 70 CagTGCTCCACTGTGgT Reverse Complement Reverse Complement Forward 5 6 0.0205497 Original Motif 0.15 0.7 0.0166667 0.133333 0.65 0.15 0.05 0.15 0.166667 0.116667 0.633333 0.0833333 0.05 0.0333333 0.0666667 0.85 0.05 0 0.833333 0.116667 0.0166667 0.966667 0 0.0166667 0.05 0.0166667 0 0.933333 0.0666667 0.833333 0.0666667 0.0333333 0.0333333 0.966667 0 0 1 0 0 0 0.05 0.916667 0.0166667 0.0166667 0.166667 0 0 0.833333 0.0833333 0.0166667 0.9 0 0 0.0166667 0.0166667 0.966667 0 0.0166667 0.966667 0.0166667 0.116667 0.166667 0.483333 0.233333 0.0666667 0.0833333 0.05 0.8 Reverse Complement Motif 0.8 0.0833333 0.05 0.0666667 0.116667 0.483333 0.166667 0.233333 0 0.966667 0.0166667 0.0166667 0.966667 0.0166667 0.0166667 0 0.0833333 0.9 0.0166667 0 0.833333 0 0 0.166667 0.05 0.0166667 0.916667 0.0166667 0 0 0 1 0.0333333 0 0.966667 0 0.0666667 0.0666667 0.833333 0.0333333 0.933333 0.0166667 0 0.05 0.0166667 0 0.966667 0.0166667 0.05 0.833333 0 0.116667 0.85 0.0333333 0.0666667 0.05 0.166667 0.633333 0.116667 0.0833333 0.15 0.15 0.05 0.65 0.15 0.0166667 0.7 0.133333 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 77 AgTGCTCCACTGTGgTGTCACAgT Original Motif Original Motif Backward 13 6 0.0290883 Original Motif 0.690141 0.126761 0.0422535 0.140845 0.169014 0.0985915 0.676056 0.056338 0.0422535 0.028169 0.028169 0.901408 0.056338 0 0.774648 0.169014 0.0422535 0.887324 0.0422535 0.028169 0 0.0140845 0 0.985915 0.056338 0.830986 0.0422535 0.0704225 0.028169 0.957746 0.0140845 0 0.957746 0 0.0140845 0.028169 0.084507 0.84507 0.0140845 0.056338 0.028169 0.0140845 0 0.957746 0.140845 0.028169 0.802817 0.028169 0.0140845 0.0140845 0.0140845 0.957746 0.0140845 0 0.929577 0.056338 0.056338 0.15493 0.619718 0.169014 0.0140845 0.028169 0 0.957746 0.056338 0.0140845 0.873239 0.056338 0.0140845 0 0 0.985915 0.0422535 0.929577 0 0.028169 0.957746 0.028169 0 0.0140845 0.028169 0.84507 0.028169 0.0985915 0.873239 0.0140845 0.0422535 0.0704225 0.0985915 0.15493 0.56338 0.183099 0.0704225 0.0140845 0.112676 0.802817 Reverse Complement Motif 0.802817 0.0140845 0.112676 0.0704225 0.0985915 0.56338 0.15493 0.183099 0.0704225 0.0140845 0.0422535 0.873239 0.028169 0.028169 0.84507 0.0985915 0.0140845 0.028169 0 0.957746 0.0422535 0 0.929577 0.028169 0.985915 0 0 0.0140845 0.056338 0.873239 0.0140845 0.056338 0.957746 0.028169 0 0.0140845 0.056338 0.619718 0.15493 0.169014 0.0140845 0.929577 0 0.056338 0.957746 0.0140845 0.0140845 0.0140845 0.140845 0.802817 0.028169 0.028169 0.957746 0.0140845 0 0.028169 0.084507 0.0140845 0.84507 0.056338 0.028169 0 0.0140845 0.957746 0.028169 0.0140845 0.957746 0 0.056338 0.0422535 0.830986 0.0704225 0.985915 0.0140845 0 0 0.0422535 0.0422535 0.887324 0.028169 0.056338 0.774648 0 0.169014 0.901408 0.028169 0.028169 0.0422535 0.169014 0.676056 0.0985915 0.056338 0.140845 0.126761 0.0422535 0.690141 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 57 REST Reverse Complement Original Motif Backward 15 6 0.039883 Original Motif 0.132621 0.109365 0.230044 0.52797 0.0363181 0.168441 0.0914214 0.70382 0.0475892 0.855354 0.0313087 0.0657483 0.906367 0.0187266 0.0586767 0.0162297 0.021197 0.0274314 0.945137 0.00623441 0.0760125 0.609346 0.201246 0.113396 0.980697 0.00435866 0.00747198 0.00747198 0.001868 0.987547 0.00747198 0.00311333 0.0217933 0.922167 0.0124533 0.0435866 0.568847 0.125234 0.100935 0.204984 0.136534 0.233791 0.0773067 0.552369 0.0243142 0.00436409 0.966958 0.00436409 0.0124688 0.00311721 0.983167 0.00124688 0.877105 0.069869 0.0212102 0.0318153 0.008125 0.8 0.145625 0.04625 0.98375 0.005625 0.004375 0.00625 0.0263488 0.00815558 0.959849 0.00564617 0.128688 0.632141 0.114878 0.124294 0.229899 0.0194724 0.432161 0.318467 0.133962 0.586792 0.200629 0.0786164 0.112579 0.700629 0.0232704 0.163522 Reverse Complement Motif 0.112579 0.0232704 0.700629 0.163522 0.133962 0.200629 0.586792 0.0786164 0.229899 0.432161 0.0194724 0.318467 0.128688 0.114878 0.632141 0.124294 0.0263488 0.959849 0.00815558 0.00564617 0.00625 0.005625 0.004375 0.98375 0.008125 0.145625 0.8 0.04625 0.0318153 0.069869 0.0212102 0.877105 0.0124688 0.983167 0.00311721 0.00124688 0.0243142 0.966958 0.00436409 0.00436409 0.552369 0.233791 0.0773067 0.136534 0.204984 0.125234 0.100935 0.568847 0.0217933 0.0124533 0.922167 0.0435866 0.001868 0.00747198 0.987547 0.00311333 0.00747198 0.00435866 0.00747198 0.980697 0.0760125 0.201246 0.609346 0.113396 0.021197 0.945137 0.0274314 0.00623441 0.0162297 0.0187266 0.0586767 0.906367 0.0475892 0.0313087 0.855354 0.0657483 0.70382 0.168441 0.0914214 0.0363181 0.52797 0.109365 0.230044 0.132621 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 65 Tcfcp2l1 Reverse Complement Original Motif Backward 2 6 0.0447224 Original Motif 0.00196754 0.92548 0.0627152 0.00983768 0.069973 0.807513 0.00540142 0.117113 0.594508 0.00514832 0.275803 0.12454 0.0058838 0.0237803 0.967149 0.00318706 0.175477 0.33627 0.0256975 0.462555 0.0983847 0.28928 0.0621635 0.550171 0.173924 0.39726 0.151174 0.277642 0.357213 0.224939 0.252323 0.165526 0.63154 0.0696822 0.190954 0.107824 0.394421 0.0513824 0.310497 0.2437 0.00366928 0.933219 0.0547945 0.00831703 0.0617193 0.812148 0.00293902 0.123194 0.536555 0.00736016 0.305937 0.150147 0.0120393 0.0289926 0.954791 0.0041769 Reverse Complement Motif 0.0120393 0.954791 0.0289926 0.0041769 0.150147 0.00736016 0.305937 0.536555 0.0617193 0.00293902 0.812148 0.123194 0.00366928 0.0547945 0.933219 0.00831703 0.2437 0.0513824 0.310497 0.394421 0.107824 0.0696822 0.190954 0.63154 0.165526 0.224939 0.252323 0.357213 0.173924 0.151174 0.39726 0.277642 0.550171 0.28928 0.0621635 0.0983847 0.462555 0.33627 0.0256975 0.175477 0.0058838 0.967149 0.0237803 0.00318706 0.12454 0.00514832 0.275803 0.594508 0.069973 0.00540142 0.807513 0.117113 0.00196754 0.0627152 0.92548 0.00983768 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 5 Motif 5 Reverse Complement Original Motif Forward 9 6 0.0459818 Original Motif 0 0.8125 0.125 0.0625 0.375 0 0 0.625 0.0625 0 0.9375 0 0.5625 0.125 0.1875 0.125 0 0 1 0 0.0625 0.9375 0 0 0 0.9375 0.0625 0 1 0 0 0 0 0.625 0 0.375 0 0.9375 0.0625 0 0 0 0 1 0 0.5625 0 0.4375 0 0.125 0.125 0.75 0.0625 0.625 0 0.3125 Reverse Complement Motif 0.0625 0 0.625 0.3125 0.75 0.125 0.125 0 0 0 0.5625 0.4375 1 0 0 0 0 0.0625 0.9375 0 0 0 0.625 0.375 0 0 0 1 0 0.0625 0.9375 0 0.0625 0 0.9375 0 0 1 0 0 0.125 0.125 0.1875 0.5625 0.0625 0.9375 0 0 0.625 0 0 0.375 0 0.125 0.8125 0.0625 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 75 wwCCAmAGTCmt Original Motif Reverse Complement Backward 2 6 0.0587933 Original Motif 0.454545 0.0454545 0.227273 0.272727 0.363636 0.136364 0.136364 0.363636 0 1 0 0 0 0.954545 0.0454545 0 1 0 0 0 0.409091 0.590909 0 0 0.909091 0.0454545 0.0454545 0 0 0 1 0 0.0454545 0 0 0.954545 0.0454545 0.909091 0 0.0454545 0.272727 0.318182 0.181818 0.227273 0.181818 0.227273 0.227273 0.363636 Reverse Complement Motif 0.363636 0.227273 0.227273 0.181818 0.272727 0.181818 0.318182 0.227273 0.0454545 0 0.909091 0.0454545 0.954545 0 0 0.0454545 0 1 0 0 0 0.0454545 0.0454545 0.909091 0.409091 0 0.590909 0 0 0 0 1 0 0.0454545 0.954545 0 0 0 1 0 0.363636 0.136364 0.136364 0.363636 0.272727 0.0454545 0.227273 0.454545 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # 5 Motif ID 85 Motif Name TFW1 Original Motif 0 0 0.025 0.975 0 0 0 1 0.1 0.025 0.825 0.05 0.15 0.625 0.05 0.175 0.175 0.05 0.625 0.15 0.05 0.825 0.025 0.1 1 0 0 0 0.975 0.025 0 0 Reverse Complement Motif 0 0.025 0 0.975 0 0 0 1 0.05 0.025 0.825 0.1 0.175 0.625 0.05 0.15 0.15 0.05 0.625 0.175 0.1 0.825 0.025 0.05 1 0 0 0 0.975 0 0.025 0 ******************************************************************* Best Matches for Significant Motif ID 85 (Highest to Lowest) ******************************************************************* Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 21 Motif 21 Original Motif Reverse Complement Backward 1 8 0.0195312 Original Motif 0 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 0.5 0.5 0 0 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 0 0.5 0 0.5 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 52 NR2F1 Reverse Complement Reverse Complement Forward 1 8 0.0276442 Original Motif 0 0 0.153846 0.846154 0.0769231 0 0.923077 0 0.923077 0 0.0769231 0 0.461538 0.538462 0 0 0 1 0 0 0 0.230769 0 0.769231 0 0.153846 0 0.846154 0.0769231 0 0 0.923077 0.153846 0 0.846154 0 0.461538 0.307692 0.230769 0 0.461538 0.384615 0.0769231 0.0769231 0.0769231 0.769231 0.0769231 0.0769231 0.230769 0.461538 0 0.307692 0 0.230769 0.230769 0.538462 Reverse Complement Motif 0.538462 0.230769 0.230769 0 0.230769 0 0.461538 0.307692 0.0769231 0.0769231 0.769231 0.0769231 0.0769231 0.384615 0.0769231 0.461538 0 0.307692 0.230769 0.461538 0.153846 0.846154 0 0 0.923077 0 0 0.0769231 0.846154 0.153846 0 0 0.769231 0.230769 0 0 0 0 1 0 0.461538 0 0.538462 0 0 0 0.0769231 0.923077 0.0769231 0.923077 0 0 0.846154 0 0.153846 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 64 PPARGRXRA Original Motif Reverse Complement Backward 7 8 0.0277567 Original Motif 0.109685 0.369895 0.373396 0.147025 0.117716 0.193473 0.148019 0.540793 0.453488 0.0267442 0.427907 0.0918605 0.116144 0.00348432 0.779326 0.101045 0.161253 0.0174014 0.781903 0.0394432 0.168213 0.149652 0.458237 0.223898 0.0822711 0.633835 0.207416 0.0764774 0.949015 0.0243337 0.0173812 0.00926999 0.604867 0.0556199 0.312862 0.0266512 0.825231 0.00578704 0.158565 0.0104167 0.0950174 0.0023175 0.88876 0.013905 0.0475087 0.0104287 0.803013 0.13905 0.0254925 0.114716 0.304751 0.555041 0.062645 0.643852 0.167053 0.12645 0.784223 0.0672854 0.0545244 0.0939675 Reverse Complement Motif 0.0939675 0.0672854 0.0545244 0.784223 0.062645 0.167053 0.643852 0.12645 0.555041 0.114716 0.304751 0.0254925 0.0475087 0.803013 0.0104287 0.13905 0.0950174 0.88876 0.0023175 0.013905 0.0104167 0.00578704 0.158565 0.825231 0.0266512 0.0556199 0.312862 0.604867 0.00926999 0.0243337 0.0173812 0.949015 0.0822711 0.207416 0.633835 0.0764774 0.168213 0.458237 0.149652 0.223898 0.161253 0.781903 0.0174014 0.0394432 0.116144 0.779326 0.00348432 0.101045 0.0918605 0.0267442 0.427907 0.453488 0.540793 0.193473 0.148019 0.117716 0.109685 0.373396 0.369895 0.147025 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 28 Motif 28 Original Motif Reverse Complement Forward 2 8 0.0328125 Original Motif 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 76 CAcCACAGTGGAGCAct Reverse Complement Original Motif Backward 9 8 0.0336914 Original Motif 0.078125 0.734375 0.046875 0.140625 0.828125 0.046875 0.078125 0.046875 0.203125 0.484375 0.15625 0.15625 0.015625 0.984375 0 0 0.96875 0.015625 0.015625 0 0 0.90625 0.015625 0.078125 0.859375 0 0 0.140625 0.03125 0 0.90625 0.0625 0 0.015625 0 0.984375 0 0 0.96875 0.03125 0.046875 0.0625 0.8125 0.078125 0.9375 0.015625 0.015625 0.03125 0.015625 0.03125 0.921875 0.03125 0.125 0.796875 0 0.078125 0.875 0.046875 0.046875 0.03125 0.09375 0.65625 0.09375 0.15625 0.15625 0.078125 0.109375 0.65625 Reverse Complement Motif 0.65625 0.078125 0.109375 0.15625 0.09375 0.09375 0.65625 0.15625 0.03125 0.046875 0.046875 0.875 0.125 0 0.796875 0.078125 0.015625 0.921875 0.03125 0.03125 0.03125 0.015625 0.015625 0.9375 0.046875 0.8125 0.0625 0.078125 0 0.96875 0 0.03125 0.984375 0.015625 0 0 0.03125 0.90625 0 0.0625 0.140625 0 0 0.859375 0 0.015625 0.90625 0.078125 0 0.015625 0.015625 0.96875 0.015625 0 0.984375 0 0.203125 0.15625 0.484375 0.15625 0.046875 0.046875 0.078125 0.828125 0.078125 0.046875 0.734375 0.140625 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 73 TGGAGCACTGTGACAcCACAGTGg Original Motif Original Motif Forward 1 8 0.0338471 Original Motif 0.0540541 0.0405405 0.0540541 0.851351 0.0405405 0.0135135 0.824324 0.121622 0.0945946 0.135135 0.756757 0.0135135 0.891892 0 0 0.108108 0.0405405 0.0945946 0.810811 0.0540541 0.0810811 0.797297 0.0540541 0.0675676 0.932432 0.027027 0 0.0405405 0.0540541 0.756757 0.135135 0.0540541 0.108108 0.027027 0.0135135 0.851351 0.108108 0 0.851351 0.0405405 0.0135135 0 0.027027 0.959459 0 0.0135135 0.945946 0.0405405 0.905405 0 0.0675676 0.027027 0.0540541 0.837838 0 0.108108 0.945946 0.0135135 0.0405405 0 0.162162 0.5 0.189189 0.148649 0.108108 0.824324 0 0.0675676 0.945946 0 0.0405405 0.0135135 0.0810811 0.837838 0.027027 0.0540541 0.945946 0 0.0135135 0.0405405 0.0540541 0.0675676 0.783784 0.0945946 0.0540541 0.027027 0 0.918919 0.0405405 0.0135135 0.864865 0.0810811 0.148649 0.121622 0.675676 0.0540541 Reverse Complement Motif 0.148649 0.675676 0.121622 0.0540541 0.0405405 0.864865 0.0135135 0.0810811 0.918919 0.027027 0 0.0540541 0.0540541 0.783784 0.0675676 0.0945946 0.0405405 0 0.0135135 0.945946 0.0810811 0.027027 0.837838 0.0540541 0.0135135 0 0.0405405 0.945946 0.108108 0 0.824324 0.0675676 0.162162 0.189189 0.5 0.148649 0 0.0135135 0.0405405 0.945946 0.0540541 0 0.837838 0.108108 0.027027 0 0.0675676 0.905405 0 0.945946 0.0135135 0.0405405 0.959459 0 0.027027 0.0135135 0.108108 0.851351 0 0.0405405 0.851351 0.027027 0.0135135 0.108108 0.0540541 0.135135 0.756757 0.0540541 0.0405405 0.027027 0 0.932432 0.0810811 0.0540541 0.797297 0.0675676 0.0405405 0.810811 0.0945946 0.0540541 0.108108 0 0 0.891892 0.0945946 0.756757 0.135135 0.0135135 0.0405405 0.824324 0.0135135 0.121622 0.851351 0.0405405 0.0540541 0.0540541 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 77 AgTGCTCCACTGTGgTGTCACAgT Reverse Complement Original Motif Forward 16 8 0.034375 Original Motif 0.690141 0.126761 0.0422535 0.140845 0.169014 0.0985915 0.676056 0.056338 0.0422535 0.028169 0.028169 0.901408 0.056338 0 0.774648 0.169014 0.0422535 0.887324 0.0422535 0.028169 0 0.0140845 0 0.985915 0.056338 0.830986 0.0422535 0.0704225 0.028169 0.957746 0.0140845 0 0.957746 0 0.0140845 0.028169 0.084507 0.84507 0.0140845 0.056338 0.028169 0.0140845 0 0.957746 0.140845 0.028169 0.802817 0.028169 0.0140845 0.0140845 0.0140845 0.957746 0.0140845 0 0.929577 0.056338 0.056338 0.15493 0.619718 0.169014 0.0140845 0.028169 0 0.957746 0.056338 0.0140845 0.873239 0.056338 0.0140845 0 0 0.985915 0.0422535 0.929577 0 0.028169 0.957746 0.028169 0 0.0140845 0.028169 0.84507 0.028169 0.0985915 0.873239 0.0140845 0.0422535 0.0704225 0.0985915 0.15493 0.56338 0.183099 0.0704225 0.0140845 0.112676 0.802817 Reverse Complement Motif 0.802817 0.0140845 0.112676 0.0704225 0.0985915 0.56338 0.15493 0.183099 0.0704225 0.0140845 0.0422535 0.873239 0.028169 0.028169 0.84507 0.0985915 0.0140845 0.028169 0 0.957746 0.0422535 0 0.929577 0.028169 0.985915 0 0 0.0140845 0.056338 0.873239 0.0140845 0.056338 0.957746 0.028169 0 0.0140845 0.056338 0.619718 0.15493 0.169014 0.0140845 0.929577 0 0.056338 0.957746 0.0140845 0.0140845 0.0140845 0.140845 0.802817 0.028169 0.028169 0.957746 0.0140845 0 0.028169 0.084507 0.0140845 0.84507 0.056338 0.028169 0 0.0140845 0.957746 0.028169 0.0140845 0.957746 0 0.056338 0.0422535 0.830986 0.0704225 0.985915 0.0140845 0 0 0.0422535 0.0422535 0.887324 0.028169 0.056338 0.774648 0 0.169014 0.901408 0.028169 0.028169 0.0422535 0.169014 0.676056 0.0985915 0.056338 0.140845 0.126761 0.0422535 0.690141 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 70 CagTGCTCCACTGTGgT Reverse Complement Original Motif Backward 3 8 0.0354167 Original Motif 0.15 0.7 0.0166667 0.133333 0.65 0.15 0.05 0.15 0.166667 0.116667 0.633333 0.0833333 0.05 0.0333333 0.0666667 0.85 0.05 0 0.833333 0.116667 0.0166667 0.966667 0 0.0166667 0.05 0.0166667 0 0.933333 0.0666667 0.833333 0.0666667 0.0333333 0.0333333 0.966667 0 0 1 0 0 0 0.05 0.916667 0.0166667 0.0166667 0.166667 0 0 0.833333 0.0833333 0.0166667 0.9 0 0 0.0166667 0.0166667 0.966667 0 0.0166667 0.966667 0.0166667 0.116667 0.166667 0.483333 0.233333 0.0666667 0.0833333 0.05 0.8 Reverse Complement Motif 0.8 0.0833333 0.05 0.0666667 0.116667 0.483333 0.166667 0.233333 0 0.966667 0.0166667 0.0166667 0.966667 0.0166667 0.0166667 0 0.0833333 0.9 0.0166667 0 0.833333 0 0 0.166667 0.05 0.0166667 0.916667 0.0166667 0 0 0 1 0.0333333 0 0.966667 0 0.0666667 0.0666667 0.833333 0.0333333 0.933333 0.0166667 0 0.05 0.0166667 0 0.966667 0.0166667 0.05 0.833333 0 0.116667 0.85 0.0333333 0.0666667 0.05 0.166667 0.633333 0.116667 0.0833333 0.15 0.15 0.05 0.65 0.15 0.0166667 0.7 0.133333 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 91 TFM3 Reverse Complement Original Motif Forward 10 8 0.0359375 Original Motif 0.0625 0.0625 0.3125 0.5625 0.125 0.0625 0 0.8125 0 0 0.0625 0.9375 0 0 0.1875 0.8125 0 0 0.125 0.875 0 0.25 0 0.75 0 0 0.125 0.875 0.1875 0 0.4375 0.375 0 0 0.125 0.875 0 0.125 0 0.875 0 0.0625 0 0.9375 0.125 0 0 0.875 0.125 0.0625 0 0.8125 0 0 0.25 0.75 0.25 0 0.375 0.375 0.9375 0.0625 0 0 0.9375 0 0 0.0625 0 0.3125 0.4375 0.25 Reverse Complement Motif 0 0.4375 0.3125 0.25 0.0625 0 0 0.9375 0 0.0625 0 0.9375 0.25 0.375 0 0.375 0.75 0 0.25 0 0.8125 0.0625 0 0.125 0.875 0 0 0.125 0.9375 0.0625 0 0 0.875 0.125 0 0 0.875 0 0.125 0 0.1875 0.4375 0 0.375 0.875 0 0.125 0 0.75 0.25 0 0 0.875 0 0.125 0 0.8125 0 0.1875 0 0.9375 0 0.0625 0 0.8125 0.0625 0 0.125 0.5625 0.0625 0.3125 0.0625 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Original Motif Forward 16 8 0.0407242 Original Motif 0.111111 0.746032 0.0634921 0.0793651 0.857143 0.047619 0.047619 0.047619 0.047619 0.857143 0.0793651 0.015873 0.031746 0 0 0.968254 0.031746 0.015873 0.904762 0.047619 0 0 0 1 0.031746 0 0.857143 0.111111 0.396825 0.111111 0.412698 0.0793651 0.031746 0.253968 0.015873 0.698413 0.365079 0 0.634921 0 0.0793651 0.206349 0.047619 0.666667 0.047619 0.936508 0.015873 0 0.952381 0 0.015873 0.031746 0.015873 0.920635 0 0.0634921 0.920635 0 0 0.0793651 0.0634921 0.047619 0.84127 0.047619 0 0 0.015873 0.984127 0.047619 0.015873 0.904762 0.031746 0.015873 0.603175 0.31746 0.0634921 0.396825 0 0.015873 0.587302 0.015873 0.47619 0.428571 0.0793651 0.0634921 0.920635 0 0.015873 0.920635 0.015873 0.047619 0.015873 0.0952381 0.68254 0.0952381 0.126984 0.047619 0.015873 0.0952381 0.84127 Reverse Complement Motif 0.84127 0.015873 0.0952381 0.047619 0.0952381 0.0952381 0.68254 0.126984 0.015873 0.015873 0.047619 0.920635 0.0634921 0 0.920635 0.015873 0.015873 0.428571 0.47619 0.0793651 0.587302 0 0.015873 0.396825 0.015873 0.31746 0.603175 0.0634921 0.047619 0.904762 0.015873 0.031746 0.984127 0 0.015873 0 0.0634921 0.84127 0.047619 0.047619 0.0793651 0 0 0.920635 0.015873 0 0.920635 0.0634921 0.031746 0 0.015873 0.952381 0.047619 0.015873 0.936508 0 0.666667 0.206349 0.047619 0.0793651 0.365079 0.634921 0 0 0.698413 0.253968 0.015873 0.031746 0.396825 0.412698 0.111111 0.0793651 0.031746 0.857143 0 0.111111 1 0 0 0 0.031746 0.904762 0.015873 0.047619 0.968254 0 0 0.031746 0.047619 0.0793651 0.857143 0.015873 0.047619 0.047619 0.047619 0.857143 0.111111 0.0634921 0.746032 0.0793651 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # 4 Motif ID 83 Motif Name srACyCCGAyr Original Motif 0 0.5 0.5 0 0.5 0 0.5 0 1 0 0 0 0 1 0 0 0 0.5 0 0.5 0 1 0 0 0 1 0 0 0 0 1 0 1 0 0 0 0 0.5 0 0.5 0.5 0 0.5 0 Reverse Complement Motif 0 0 0.5 0.5 0 0 0.5 0.5 0 0 0 1 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0.5 0.5 0 0 1 0 0 0 0 1 0 0 0.5 0.5 0 0.5 0.5 0 ******************************************************************* Best Matches for Significant Motif ID 83 (Highest to Lowest) ******************************************************************* Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 92 TFM11 Reverse Complement Reverse Complement Backward 8 11 0.0337509 Original Motif 0 0.769231 0 0.230769 0.730769 0 0.192308 0.0769231 0.346154 0.576923 0.0384615 0.0384615 0.923077 0.0769231 0 0 0.153846 0.769231 0.0769231 0 0.923077 0.0769231 0 0 0 0.807692 0.0769231 0.115385 0.846154 0.153846 0 0 0.115385 0.846154 0.0384615 0 0.807692 0 0 0.192308 0.0384615 0.884615 0 0.0769231 0.692308 0 0.0769231 0.230769 0.0769231 0.538462 0 0.384615 0.461538 0.0384615 0.269231 0.230769 0 0.807692 0.192308 0 0.807692 0.153846 0 0.0384615 0.0769231 0.692308 0 0.230769 0.807692 0 0.192308 0 0.0769231 0.730769 0.115385 0.0769231 0.923077 0 0 0.0769231 Reverse Complement Motif 0.0769231 0 0 0.923077 0.0769231 0.115385 0.730769 0.0769231 0 0 0.192308 0.807692 0.0769231 0 0.692308 0.230769 0.0384615 0.153846 0 0.807692 0 0.192308 0.807692 0 0.230769 0.0384615 0.269231 0.461538 0.0769231 0 0.538462 0.384615 0.230769 0 0.0769231 0.692308 0.0384615 0 0.884615 0.0769231 0.192308 0 0 0.807692 0.115385 0.0384615 0.846154 0 0 0.153846 0 0.846154 0 0.0769231 0.807692 0.115385 0 0.0769231 0 0.923077 0.153846 0.0769231 0.769231 0 0 0.0769231 0 0.923077 0.346154 0.0384615 0.576923 0.0384615 0.0769231 0 0.192308 0.730769 0 0 0.769231 0.230769 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 53 ESR1 Reverse Complement Reverse Complement Backward 9 11 0.0342809 Original Motif 0.261242 0.256959 0.329764 0.152034 0.228632 0.17094 0.350427 0.25 0.136752 0.369658 0.318376 0.175214 0.176596 0.487234 0.138298 0.197872 0.285106 0.493617 0.1 0.121277 0.651163 0.0591966 0.188161 0.10148 0.0759494 0.0168776 0.816456 0.0907173 0.04 0.0378947 0.884211 0.0378947 0.0694737 0.0863158 0.191579 0.652632 0.00842105 0.829474 0.111579 0.0505263 0.837895 0.0273684 0.0568421 0.0778947 0.122105 0.526316 0.225263 0.126316 0.132632 0.581053 0.111579 0.174737 0.134737 0.543158 0.204211 0.117895 0.0673684 0.04 0.0168421 0.875789 0.0442105 0.0463158 0.896842 0.0126316 0.642105 0.223158 0.0652632 0.0694737 0.0210526 0.917895 0.0252632 0.0357895 0.124211 0.743158 0.00421053 0.128421 0.0547368 0.347368 0.0463158 0.551579 Reverse Complement Motif 0.551579 0.347368 0.0463158 0.0547368 0.124211 0.00421053 0.743158 0.128421 0.0210526 0.0252632 0.917895 0.0357895 0.0694737 0.223158 0.0652632 0.642105 0.0442105 0.896842 0.0463158 0.0126316 0.875789 0.04 0.0168421 0.0673684 0.134737 0.204211 0.543158 0.117895 0.132632 0.111579 0.581053 0.174737 0.122105 0.225263 0.526316 0.126316 0.0778947 0.0273684 0.0568421 0.837895 0.00842105 0.111579 0.829474 0.0505263 0.652632 0.0863158 0.191579 0.0694737 0.04 0.884211 0.0378947 0.0378947 0.0759494 0.816456 0.0168776 0.0907173 0.10148 0.0591966 0.188161 0.651163 0.285106 0.1 0.493617 0.121277 0.176596 0.138298 0.487234 0.197872 0.136752 0.318376 0.369658 0.175214 0.228632 0.350427 0.17094 0.25 0.261242 0.329764 0.256959 0.152034 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 89 TFM1 Reverse Complement Reverse Complement Backward 2 11 0.0348124 Original Motif 0.107143 0.642857 0 0.25 0.785714 0.0357143 0.0714286 0.107143 0.25 0.714286 0.0357143 0 1 0 0 0 0 0.892857 0.107143 0 0.821429 0.142857 0 0.0357143 0.107143 0.785714 0.0714286 0.0357143 0.857143 0 0 0.142857 0 0.928571 0.0357143 0.0357143 0.785714 0 0.0714286 0.142857 0.142857 0.571429 0 0.285714 0.5 0 0.214286 0.285714 0 0.821429 0.178571 0 0.75 0.178571 0 0.0714286 0.0357143 0.821429 0 0.142857 0.857143 0.0357143 0.107143 0 0.178571 0.642857 0.178571 0 0.964286 0 0.0357143 0 Reverse Complement Motif 0 0 0.0357143 0.964286 0.178571 0.178571 0.642857 0 0 0.0357143 0.107143 0.857143 0.0357143 0 0.821429 0.142857 0.0714286 0.178571 0 0.75 0 0.178571 0.821429 0 0.285714 0 0.214286 0.5 0.142857 0 0.571429 0.285714 0.142857 0 0.0714286 0.785714 0 0.0357143 0.928571 0.0357143 0.142857 0 0 0.857143 0.107143 0.0714286 0.785714 0.0357143 0.0357143 0.142857 0 0.821429 0 0.107143 0.892857 0 0 0 0 1 0.25 0.0357143 0.714286 0 0.107143 0.0357143 0.0714286 0.785714 0.107143 0 0.642857 0.25 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 73 TGGAGCACTGTGACAcCACAGTGg Reverse Complement Reverse Complement Forward 10 11 0.0372475 Original Motif 0.0540541 0.0405405 0.0540541 0.851351 0.0405405 0.0135135 0.824324 0.121622 0.0945946 0.135135 0.756757 0.0135135 0.891892 0 0 0.108108 0.0405405 0.0945946 0.810811 0.0540541 0.0810811 0.797297 0.0540541 0.0675676 0.932432 0.027027 0 0.0405405 0.0540541 0.756757 0.135135 0.0540541 0.108108 0.027027 0.0135135 0.851351 0.108108 0 0.851351 0.0405405 0.0135135 0 0.027027 0.959459 0 0.0135135 0.945946 0.0405405 0.905405 0 0.0675676 0.027027 0.0540541 0.837838 0 0.108108 0.945946 0.0135135 0.0405405 0 0.162162 0.5 0.189189 0.148649 0.108108 0.824324 0 0.0675676 0.945946 0 0.0405405 0.0135135 0.0810811 0.837838 0.027027 0.0540541 0.945946 0 0.0135135 0.0405405 0.0540541 0.0675676 0.783784 0.0945946 0.0540541 0.027027 0 0.918919 0.0405405 0.0135135 0.864865 0.0810811 0.148649 0.121622 0.675676 0.0540541 Reverse Complement Motif 0.148649 0.675676 0.121622 0.0540541 0.0405405 0.864865 0.0135135 0.0810811 0.918919 0.027027 0 0.0540541 0.0540541 0.783784 0.0675676 0.0945946 0.0405405 0 0.0135135 0.945946 0.0810811 0.027027 0.837838 0.0540541 0.0135135 0 0.0405405 0.945946 0.108108 0 0.824324 0.0675676 0.162162 0.189189 0.5 0.148649 0 0.0135135 0.0405405 0.945946 0.0540541 0 0.837838 0.108108 0.027027 0 0.0675676 0.905405 0 0.945946 0.0135135 0.0405405 0.959459 0 0.027027 0.0135135 0.108108 0.851351 0 0.0405405 0.851351 0.027027 0.0135135 0.108108 0.0540541 0.135135 0.756757 0.0540541 0.0405405 0.027027 0 0.932432 0.0810811 0.0540541 0.797297 0.0675676 0.0405405 0.810811 0.0945946 0.0540541 0.108108 0 0 0.891892 0.0945946 0.756757 0.135135 0.0135135 0.0405405 0.824324 0.0135135 0.121622 0.851351 0.0405405 0.0540541 0.0540541 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 59 ESR2 Original Motif Reverse Complement Backward 5 11 0.0379796 Original Motif 0.218487 0.45098 0.176471 0.154062 0.442577 0.142857 0.114846 0.29972 0.521008 0.0420168 0.431373 0.00560224 0.0756303 0 0.770308 0.154062 0.0504202 0.0560224 0.893557 0 0.0364146 0.0532213 0.092437 0.817927 0 1 0 0 0.943978 0.00280112 0 0.0532213 0.137255 0.344538 0.316527 0.201681 0.179272 0.176471 0.417367 0.226891 0.145658 0.170868 0.411765 0.271709 0.0588235 0.092437 0.0672269 0.781513 0.176471 0.070028 0.742297 0.0112045 0.498599 0.277311 0.0532213 0.170868 0.0952381 0.7507 0.00560224 0.148459 0.128852 0.809524 0 0.0616246 0.0756303 0.252101 0 0.672269 0.168067 0.263305 0.380952 0.187675 Reverse Complement Motif 0.168067 0.380952 0.263305 0.187675 0.672269 0.252101 0 0.0756303 0.128852 0 0.809524 0.0616246 0.0952381 0.00560224 0.7507 0.148459 0.170868 0.277311 0.0532213 0.498599 0.176471 0.742297 0.070028 0.0112045 0.781513 0.092437 0.0672269 0.0588235 0.145658 0.411765 0.170868 0.271709 0.179272 0.417367 0.176471 0.226891 0.137255 0.316527 0.344538 0.201681 0.0532213 0.00280112 0 0.943978 0 0 1 0 0.817927 0.0532213 0.092437 0.0364146 0.0504202 0.893557 0.0560224 0 0.0756303 0.770308 0 0.154062 0.00560224 0.0420168 0.431373 0.521008 0.29972 0.142857 0.114846 0.442577 0.218487 0.176471 0.45098 0.154062 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 67 TgTGgTGTCACAGTGCTCC Original Motif Reverse Complement Backward 4 11 0.0381944 Original Motif 0.111111 0.0833333 0.0555556 0.75 0.125 0.0972222 0.652778 0.125 0.0416667 0.0972222 0.0277778 0.833333 0.0277778 0.0277778 0.791667 0.152778 0.0555556 0.166667 0.652778 0.125 0 0.0416667 0.0138889 0.944444 0.0416667 0 0.888889 0.0694444 0.0277778 0.0277778 0 0.944444 0.0416667 0.944444 0.0138889 0 0.916667 0.0277778 0 0.0555556 0.0694444 0.875 0 0.0555556 0.833333 0.0138889 0.0138889 0.138889 0.0416667 0.0694444 0.819444 0.0694444 0.0277778 0.0277778 0.0277778 0.916667 0.0694444 0.0138889 0.847222 0.0694444 0.0694444 0.777778 0.0277778 0.125 0.0555556 0.0416667 0.0277778 0.875 0.0416667 0.708333 0.125 0.125 0.111111 0.819444 0.0555556 0.0138889 Reverse Complement Motif 0.111111 0.0555556 0.819444 0.0138889 0.0416667 0.125 0.708333 0.125 0.875 0.0416667 0.0277778 0.0555556 0.0694444 0.0277778 0.777778 0.125 0.0694444 0.847222 0.0138889 0.0694444 0.916667 0.0277778 0.0277778 0.0277778 0.0416667 0.819444 0.0694444 0.0694444 0.138889 0.0138889 0.0138889 0.833333 0.0694444 0 0.875 0.0555556 0.0555556 0.0277778 0 0.916667 0.0416667 0.0138889 0.944444 0 0.944444 0.0277778 0 0.0277778 0.0416667 0.888889 0 0.0694444 0.944444 0.0416667 0.0138889 0 0.0555556 0.652778 0.166667 0.125 0.0277778 0.791667 0.0277778 0.152778 0.833333 0.0972222 0.0277778 0.0416667 0.125 0.652778 0.0972222 0.125 0.75 0.0833333 0.0555556 0.111111 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 6 Motif 6 Reverse Complement Reverse Complement Forward 3 11 0.039412 Original Motif 0 0.857143 0 0.142857 0.904762 0 0 0.095238 0 0.571429 0.428571 0 1 0 0 0 0.047619 0.380952 0.285714 0.285714 0.52381 0.047619 0.238095 0.190476 0.047619 0.809524 0.142857 0 0.47619 0 0 0.52381 0.190476 0.333333 0.47619 0 1 0 0 0 0 0.666667 0.333333 0 1 0 0 0 0 1 0 0 0.857143 0 0 0.142857 Reverse Complement Motif 0.142857 0 0 0.857143 0 0 1 0 0 0 0 1 0 0.333333 0.666667 0 0 0 0 1 0.190476 0.47619 0.333333 0 0.52381 0 0 0.47619 0.047619 0.142857 0.809524 0 0.190476 0.047619 0.238095 0.52381 0.047619 0.285714 0.380952 0.285714 0 0 0 1 0 0.428571 0.571429 0 0.095238 0 0 0.904762 0 0 0.857143 0.142857 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Reverse Complement Forward 9 11 0.0397727 Original Motif 0.111111 0.746032 0.0634921 0.0793651 0.857143 0.047619 0.047619 0.047619 0.047619 0.857143 0.0793651 0.015873 0.031746 0 0 0.968254 0.031746 0.015873 0.904762 0.047619 0 0 0 1 0.031746 0 0.857143 0.111111 0.396825 0.111111 0.412698 0.0793651 0.031746 0.253968 0.015873 0.698413 0.365079 0 0.634921 0 0.0793651 0.206349 0.047619 0.666667 0.047619 0.936508 0.015873 0 0.952381 0 0.015873 0.031746 0.015873 0.920635 0 0.0634921 0.920635 0 0 0.0793651 0.0634921 0.047619 0.84127 0.047619 0 0 0.015873 0.984127 0.047619 0.015873 0.904762 0.031746 0.015873 0.603175 0.31746 0.0634921 0.396825 0 0.015873 0.587302 0.015873 0.47619 0.428571 0.0793651 0.0634921 0.920635 0 0.015873 0.920635 0.015873 0.047619 0.015873 0.0952381 0.68254 0.0952381 0.126984 0.047619 0.015873 0.0952381 0.84127 Reverse Complement Motif 0.84127 0.015873 0.0952381 0.047619 0.0952381 0.0952381 0.68254 0.126984 0.015873 0.015873 0.047619 0.920635 0.0634921 0 0.920635 0.015873 0.015873 0.428571 0.47619 0.0793651 0.587302 0 0.015873 0.396825 0.015873 0.31746 0.603175 0.0634921 0.047619 0.904762 0.015873 0.031746 0.984127 0 0.015873 0 0.0634921 0.84127 0.047619 0.047619 0.0793651 0 0 0.920635 0.015873 0 0.920635 0.0634921 0.031746 0 0.015873 0.952381 0.047619 0.015873 0.936508 0 0.666667 0.206349 0.047619 0.0793651 0.365079 0.634921 0 0 0.698413 0.253968 0.015873 0.031746 0.396825 0.412698 0.111111 0.0793651 0.031746 0.857143 0 0.111111 1 0 0 0 0.031746 0.904762 0.015873 0.047619 0.968254 0 0 0.031746 0.047619 0.0793651 0.857143 0.015873 0.047619 0.047619 0.047619 0.857143 0.111111 0.0634921 0.746032 0.0793651 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 57 REST Reverse Complement Reverse Complement Backward 5 11 0.0402801 Original Motif 0.132621 0.109365 0.230044 0.52797 0.0363181 0.168441 0.0914214 0.70382 0.0475892 0.855354 0.0313087 0.0657483 0.906367 0.0187266 0.0586767 0.0162297 0.021197 0.0274314 0.945137 0.00623441 0.0760125 0.609346 0.201246 0.113396 0.980697 0.00435866 0.00747198 0.00747198 0.001868 0.987547 0.00747198 0.00311333 0.0217933 0.922167 0.0124533 0.0435866 0.568847 0.125234 0.100935 0.204984 0.136534 0.233791 0.0773067 0.552369 0.0243142 0.00436409 0.966958 0.00436409 0.0124688 0.00311721 0.983167 0.00124688 0.877105 0.069869 0.0212102 0.0318153 0.008125 0.8 0.145625 0.04625 0.98375 0.005625 0.004375 0.00625 0.0263488 0.00815558 0.959849 0.00564617 0.128688 0.632141 0.114878 0.124294 0.229899 0.0194724 0.432161 0.318467 0.133962 0.586792 0.200629 0.0786164 0.112579 0.700629 0.0232704 0.163522 Reverse Complement Motif 0.112579 0.0232704 0.700629 0.163522 0.133962 0.200629 0.586792 0.0786164 0.229899 0.432161 0.0194724 0.318467 0.128688 0.114878 0.632141 0.124294 0.0263488 0.959849 0.00815558 0.00564617 0.00625 0.005625 0.004375 0.98375 0.008125 0.145625 0.8 0.04625 0.0318153 0.069869 0.0212102 0.877105 0.0124688 0.983167 0.00311721 0.00124688 0.0243142 0.966958 0.00436409 0.00436409 0.552369 0.233791 0.0773067 0.136534 0.204984 0.125234 0.100935 0.568847 0.0217933 0.0124533 0.922167 0.0435866 0.001868 0.00747198 0.987547 0.00311333 0.00747198 0.00435866 0.00747198 0.980697 0.0760125 0.201246 0.609346 0.113396 0.021197 0.945137 0.0274314 0.00623441 0.0162297 0.0187266 0.0586767 0.906367 0.0475892 0.0313087 0.855354 0.0657483 0.70382 0.168441 0.0914214 0.0363181 0.52797 0.109365 0.230044 0.132621 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 2 Motif 2 Reverse Complement Reverse Complement Backward 3 11 0.0438762 Original Motif 0.833333 0 0.166667 0 0 1 0 0 0.875 0 0 0.125 0.083333 0.875 0.041667 0 0.958333 0 0 0.041667 0.125 0.875 0 0 0.833333 0.166667 0 0 0 0.75 0 0.25 0.666667 0 0.208333 0.125 0 0.833333 0.041667 0.125 0.791667 0.125 0.083333 0 0 1 0 0 0.708334 0 0.0833331 0.208333 0 0.958333 0 0.041667 Reverse Complement Motif 0 0 0.958333 0.041667 0.208333 0 0.0833331 0.708334 0 0 1 0 0 0.125 0.083333 0.791667 0 0.041667 0.833333 0.125 0.125 0 0.208333 0.666667 0 0 0.75 0.25 0 0.166667 0 0.833333 0.125 0 0.875 0 0.041667 0 0 0.958333 0.083333 0.041667 0.875 0 0.125 0 0 0.875 0 0 1 0 0 0 0.166667 0.833333 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # 5 Motif ID 87 Motif Name TFF1 Original Motif 0.894366 0.00704225 0.056338 0.0422535 0.0211268 0.0422535 0.922535 0.0140845 0.161972 0.0915493 0.661972 0.084507 0.535211 0.140845 0.126761 0.197183 0.00704225 0.957746 0.028169 0.00704225 0.957746 0.00704225 0.0352113 0 0.612676 0.225352 0.0915493 0.0704225 0.732394 0.028169 0.133803 0.105634 0.084507 0.183099 0.676056 0.056338 0.514085 0.15493 0.176056 0.15493 0.225352 0.190141 0.443662 0.140845 0.232394 0.352113 0.232394 0.183099 Reverse Complement Motif 0.232394 0.232394 0.352113 0.183099 0.225352 0.443662 0.190141 0.140845 0.15493 0.15493 0.176056 0.514085 0.084507 0.676056 0.183099 0.056338 0.105634 0.028169 0.133803 0.732394 0.0704225 0.225352 0.0915493 0.612676 0 0.00704225 0.0352113 0.957746 0.00704225 0.028169 0.957746 0.00704225 0.197183 0.140845 0.126761 0.535211 0.161972 0.661972 0.0915493 0.084507 0.0211268 0.922535 0.0422535 0.0140845 0.0422535 0.00704225 0.056338 0.894366 ******************************************************************* Best Matches for Significant Motif ID 87 (Highest to Lowest) ******************************************************************* Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 51 HNF4A Reverse Complement Reverse Complement Forward 2 12 0.0111472 Original Motif 0.41791 0.104478 0.402985 0.0746269 0.0298507 0.0298507 0.835821 0.104478 0.179104 0.0597015 0.522388 0.238806 0.0746269 0.343284 0.298507 0.283582 0.0447761 0.761194 0.0597015 0.134328 0.880597 0.0149254 0.0447761 0.0597015 0.791045 0.0298507 0.149254 0.0298507 0.835821 0.0149254 0.119403 0.0298507 0.0597015 0.0597015 0.865672 0.0149254 0.0895522 0.0298507 0.492537 0.38806 0.0447761 0.328358 0.164179 0.462687 0.0597015 0.731343 0.0746269 0.134328 0.626866 0.104478 0.149254 0.119403 Reverse Complement Motif 0.119403 0.104478 0.149254 0.626866 0.0597015 0.0746269 0.731343 0.134328 0.462687 0.328358 0.164179 0.0447761 0.0895522 0.492537 0.0298507 0.38806 0.0597015 0.865672 0.0597015 0.0149254 0.0298507 0.0149254 0.119403 0.835821 0.0298507 0.0298507 0.149254 0.791045 0.0597015 0.0149254 0.0447761 0.880597 0.0447761 0.0597015 0.761194 0.134328 0.0746269 0.298507 0.343284 0.283582 0.179104 0.522388 0.0597015 0.238806 0.0298507 0.835821 0.0298507 0.104478 0.0746269 0.104478 0.402985 0.41791 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 64 PPARGRXRA Original Motif Original Motif Backward 2 12 0.0210867 Original Motif 0.109685 0.369895 0.373396 0.147025 0.117716 0.193473 0.148019 0.540793 0.453488 0.0267442 0.427907 0.0918605 0.116144 0.00348432 0.779326 0.101045 0.161253 0.0174014 0.781903 0.0394432 0.168213 0.149652 0.458237 0.223898 0.0822711 0.633835 0.207416 0.0764774 0.949015 0.0243337 0.0173812 0.00926999 0.604867 0.0556199 0.312862 0.0266512 0.825231 0.00578704 0.158565 0.0104167 0.0950174 0.0023175 0.88876 0.013905 0.0475087 0.0104287 0.803013 0.13905 0.0254925 0.114716 0.304751 0.555041 0.062645 0.643852 0.167053 0.12645 0.784223 0.0672854 0.0545244 0.0939675 Reverse Complement Motif 0.0939675 0.0672854 0.0545244 0.784223 0.062645 0.167053 0.643852 0.12645 0.555041 0.114716 0.304751 0.0254925 0.0475087 0.803013 0.0104287 0.13905 0.0950174 0.88876 0.0023175 0.013905 0.0104167 0.00578704 0.158565 0.825231 0.0266512 0.0556199 0.312862 0.604867 0.00926999 0.0243337 0.0173812 0.949015 0.0822711 0.207416 0.633835 0.0764774 0.168213 0.458237 0.149652 0.223898 0.161253 0.781903 0.0174014 0.0394432 0.116144 0.779326 0.00348432 0.101045 0.0918605 0.0267442 0.427907 0.453488 0.540793 0.193473 0.148019 0.117716 0.109685 0.373396 0.369895 0.147025 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 59 ESR2 Reverse Complement Reverse Complement Forward 5 12 0.0351633 Original Motif 0.218487 0.45098 0.176471 0.154062 0.442577 0.142857 0.114846 0.29972 0.521008 0.0420168 0.431373 0.00560224 0.0756303 0 0.770308 0.154062 0.0504202 0.0560224 0.893557 0 0.0364146 0.0532213 0.092437 0.817927 0 1 0 0 0.943978 0.00280112 0 0.0532213 0.137255 0.344538 0.316527 0.201681 0.179272 0.176471 0.417367 0.226891 0.145658 0.170868 0.411765 0.271709 0.0588235 0.092437 0.0672269 0.781513 0.176471 0.070028 0.742297 0.0112045 0.498599 0.277311 0.0532213 0.170868 0.0952381 0.7507 0.00560224 0.148459 0.128852 0.809524 0 0.0616246 0.0756303 0.252101 0 0.672269 0.168067 0.263305 0.380952 0.187675 Reverse Complement Motif 0.168067 0.380952 0.263305 0.187675 0.672269 0.252101 0 0.0756303 0.128852 0 0.809524 0.0616246 0.0952381 0.00560224 0.7507 0.148459 0.170868 0.277311 0.0532213 0.498599 0.176471 0.742297 0.070028 0.0112045 0.781513 0.092437 0.0672269 0.0588235 0.145658 0.411765 0.170868 0.271709 0.179272 0.417367 0.176471 0.226891 0.137255 0.316527 0.344538 0.201681 0.0532213 0.00280112 0 0.943978 0 0 1 0 0.817927 0.0532213 0.092437 0.0364146 0.0504202 0.893557 0.0560224 0 0.0756303 0.770308 0 0.154062 0.00560224 0.0420168 0.431373 0.521008 0.29972 0.142857 0.114846 0.442577 0.218487 0.176471 0.45098 0.154062 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 53 ESR1 Reverse Complement Original Motif Backward 9 12 0.039773 Original Motif 0.261242 0.256959 0.329764 0.152034 0.228632 0.17094 0.350427 0.25 0.136752 0.369658 0.318376 0.175214 0.176596 0.487234 0.138298 0.197872 0.285106 0.493617 0.1 0.121277 0.651163 0.0591966 0.188161 0.10148 0.0759494 0.0168776 0.816456 0.0907173 0.04 0.0378947 0.884211 0.0378947 0.0694737 0.0863158 0.191579 0.652632 0.00842105 0.829474 0.111579 0.0505263 0.837895 0.0273684 0.0568421 0.0778947 0.122105 0.526316 0.225263 0.126316 0.132632 0.581053 0.111579 0.174737 0.134737 0.543158 0.204211 0.117895 0.0673684 0.04 0.0168421 0.875789 0.0442105 0.0463158 0.896842 0.0126316 0.642105 0.223158 0.0652632 0.0694737 0.0210526 0.917895 0.0252632 0.0357895 0.124211 0.743158 0.00421053 0.128421 0.0547368 0.347368 0.0463158 0.551579 Reverse Complement Motif 0.551579 0.347368 0.0463158 0.0547368 0.124211 0.00421053 0.743158 0.128421 0.0210526 0.0252632 0.917895 0.0357895 0.0694737 0.223158 0.0652632 0.642105 0.0442105 0.896842 0.0463158 0.0126316 0.875789 0.04 0.0168421 0.0673684 0.134737 0.204211 0.543158 0.117895 0.132632 0.111579 0.581053 0.174737 0.122105 0.225263 0.526316 0.126316 0.0778947 0.0273684 0.0568421 0.837895 0.00842105 0.111579 0.829474 0.0505263 0.652632 0.0863158 0.191579 0.0694737 0.04 0.884211 0.0378947 0.0378947 0.0759494 0.816456 0.0168776 0.0907173 0.10148 0.0591966 0.188161 0.651163 0.285106 0.1 0.493617 0.121277 0.176596 0.138298 0.487234 0.197872 0.136752 0.318376 0.369658 0.175214 0.228632 0.350427 0.17094 0.25 0.261242 0.329764 0.256959 0.152034 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 93 TFM12 Original Motif Original Motif Backward 8 12 0.0408272 Original Motif 0.380282 0.211268 0.373239 0.0352113 0.746479 0.0422535 0.119718 0.0915493 0.28169 0.0492958 0.56338 0.105634 0.21831 0 0.443662 0.338028 0.161972 0.126761 0.598592 0.112676 0.267606 0.528169 0.176056 0.028169 0.640845 0.028169 0.0915493 0.239437 0.0633803 0.084507 0.809859 0.0422535 0.366197 0.246479 0.211268 0.176056 0.471831 0.140845 0.309859 0.0774648 0.373239 0 0.542254 0.084507 0.211268 0.105634 0.605634 0.0774648 0.197183 0.302817 0.478873 0.0211268 0.408451 0.140845 0.387324 0.0633803 0.0985915 0.704225 0.197183 0 0.683099 0.028169 0.0704225 0.21831 0.140845 0.373239 0.485915 0 0.788732 0 0.0633803 0.147887 0 0.169014 0.816901 0.0140845 0.274648 0.295775 0.239437 0.190141 Reverse Complement Motif 0.274648 0.239437 0.295775 0.190141 0 0.816901 0.169014 0.0140845 0.147887 0 0.0633803 0.788732 0.140845 0.485915 0.373239 0 0.21831 0.028169 0.0704225 0.683099 0.0985915 0.197183 0.704225 0 0.0633803 0.140845 0.387324 0.408451 0.197183 0.478873 0.302817 0.0211268 0.211268 0.605634 0.105634 0.0774648 0.373239 0.542254 0 0.084507 0.0774648 0.140845 0.309859 0.471831 0.176056 0.246479 0.211268 0.366197 0.0633803 0.809859 0.084507 0.0422535 0.239437 0.028169 0.0915493 0.640845 0.267606 0.176056 0.528169 0.028169 0.161972 0.598592 0.126761 0.112676 0.21831 0.443662 0 0.338028 0.28169 0.56338 0.0492958 0.105634 0.0915493 0.0422535 0.119718 0.746479 0.0352113 0.211268 0.373239 0.380282 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 52 NR2F1 Original Motif Reverse Complement Backward 2 12 0.0472374 Original Motif 0 0 0.153846 0.846154 0.0769231 0 0.923077 0 0.923077 0 0.0769231 0 0.461538 0.538462 0 0 0 1 0 0 0 0.230769 0 0.769231 0 0.153846 0 0.846154 0.0769231 0 0 0.923077 0.153846 0 0.846154 0 0.461538 0.307692 0.230769 0 0.461538 0.384615 0.0769231 0.0769231 0.0769231 0.769231 0.0769231 0.0769231 0.230769 0.461538 0 0.307692 0 0.230769 0.230769 0.538462 Reverse Complement Motif 0.538462 0.230769 0.230769 0 0.230769 0 0.461538 0.307692 0.0769231 0.0769231 0.769231 0.0769231 0.0769231 0.384615 0.0769231 0.461538 0 0.307692 0.230769 0.461538 0.153846 0.846154 0 0 0.923077 0 0 0.0769231 0.846154 0.153846 0 0 0.769231 0.230769 0 0 0 0 1 0 0.461538 0 0.538462 0 0 0 0.0769231 0.923077 0.0769231 0.923077 0 0 0.846154 0 0.153846 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 60 NR1H2RXRA Reverse Complement Reverse Complement Backward 3 12 0.0472884 Original Motif 0.68 0.2 0 0.12 0.68 0.04 0.2 0.08 0.8 0 0.2 0 0 0 1 0 0 0 0.96 0.04 0 0 0 1 0 1 0 0 1 0 0 0 0.96 0 0 0.04 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 1 0 0 1 0 0 0 0.8 0.04 0.08 0.08 0 0.6 0.24 0.16 Reverse Complement Motif 0 0.24 0.6 0.16 0.08 0.04 0.08 0.8 0 0 0 1 0 0 1 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0.04 0 0 0.96 0 0 0 1 0 0 1 0 1 0 0 0 0 0.96 0 0.04 0 1 0 0 0 0 0.2 0.8 0.08 0.04 0.2 0.68 0.12 0.2 0 0.68 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Original Motif Backward 7 12 0.0530556 Original Motif 0.111111 0.746032 0.0634921 0.0793651 0.857143 0.047619 0.047619 0.047619 0.047619 0.857143 0.0793651 0.015873 0.031746 0 0 0.968254 0.031746 0.015873 0.904762 0.047619 0 0 0 1 0.031746 0 0.857143 0.111111 0.396825 0.111111 0.412698 0.0793651 0.031746 0.253968 0.015873 0.698413 0.365079 0 0.634921 0 0.0793651 0.206349 0.047619 0.666667 0.047619 0.936508 0.015873 0 0.952381 0 0.015873 0.031746 0.015873 0.920635 0 0.0634921 0.920635 0 0 0.0793651 0.0634921 0.047619 0.84127 0.047619 0 0 0.015873 0.984127 0.047619 0.015873 0.904762 0.031746 0.015873 0.603175 0.31746 0.0634921 0.396825 0 0.015873 0.587302 0.015873 0.47619 0.428571 0.0793651 0.0634921 0.920635 0 0.015873 0.920635 0.015873 0.047619 0.015873 0.0952381 0.68254 0.0952381 0.126984 0.047619 0.015873 0.0952381 0.84127 Reverse Complement Motif 0.84127 0.015873 0.0952381 0.047619 0.0952381 0.0952381 0.68254 0.126984 0.015873 0.015873 0.047619 0.920635 0.0634921 0 0.920635 0.015873 0.015873 0.428571 0.47619 0.0793651 0.587302 0 0.015873 0.396825 0.015873 0.31746 0.603175 0.0634921 0.047619 0.904762 0.015873 0.031746 0.984127 0 0.015873 0 0.0634921 0.84127 0.047619 0.047619 0.0793651 0 0 0.920635 0.015873 0 0.920635 0.0634921 0.031746 0 0.015873 0.952381 0.047619 0.015873 0.936508 0 0.666667 0.206349 0.047619 0.0793651 0.365079 0.634921 0 0 0.698413 0.253968 0.015873 0.031746 0.396825 0.412698 0.111111 0.0793651 0.031746 0.857143 0 0.111111 1 0 0 0 0.031746 0.904762 0.015873 0.047619 0.968254 0 0 0.031746 0.047619 0.0793651 0.857143 0.015873 0.047619 0.047619 0.047619 0.857143 0.111111 0.0634921 0.746032 0.0793651 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 73 TGGAGCACTGTGACAcCACAGTGg Original Motif Original Motif Backward 1 12 0.0539204 Original Motif 0.0540541 0.0405405 0.0540541 0.851351 0.0405405 0.0135135 0.824324 0.121622 0.0945946 0.135135 0.756757 0.0135135 0.891892 0 0 0.108108 0.0405405 0.0945946 0.810811 0.0540541 0.0810811 0.797297 0.0540541 0.0675676 0.932432 0.027027 0 0.0405405 0.0540541 0.756757 0.135135 0.0540541 0.108108 0.027027 0.0135135 0.851351 0.108108 0 0.851351 0.0405405 0.0135135 0 0.027027 0.959459 0 0.0135135 0.945946 0.0405405 0.905405 0 0.0675676 0.027027 0.0540541 0.837838 0 0.108108 0.945946 0.0135135 0.0405405 0 0.162162 0.5 0.189189 0.148649 0.108108 0.824324 0 0.0675676 0.945946 0 0.0405405 0.0135135 0.0810811 0.837838 0.027027 0.0540541 0.945946 0 0.0135135 0.0405405 0.0540541 0.0675676 0.783784 0.0945946 0.0540541 0.027027 0 0.918919 0.0405405 0.0135135 0.864865 0.0810811 0.148649 0.121622 0.675676 0.0540541 Reverse Complement Motif 0.148649 0.675676 0.121622 0.0540541 0.0405405 0.864865 0.0135135 0.0810811 0.918919 0.027027 0 0.0540541 0.0540541 0.783784 0.0675676 0.0945946 0.0405405 0 0.0135135 0.945946 0.0810811 0.027027 0.837838 0.0540541 0.0135135 0 0.0405405 0.945946 0.108108 0 0.824324 0.0675676 0.162162 0.189189 0.5 0.148649 0 0.0135135 0.0405405 0.945946 0.0540541 0 0.837838 0.108108 0.027027 0 0.0675676 0.905405 0 0.945946 0.0135135 0.0405405 0.959459 0 0.027027 0.0135135 0.108108 0.851351 0 0.0405405 0.851351 0.027027 0.0135135 0.108108 0.0540541 0.135135 0.756757 0.0540541 0.0405405 0.027027 0 0.932432 0.0810811 0.0540541 0.797297 0.0675676 0.0405405 0.810811 0.0945946 0.0540541 0.108108 0 0 0.891892 0.0945946 0.756757 0.135135 0.0135135 0.0405405 0.824324 0.0135135 0.121622 0.851351 0.0405405 0.0540541 0.0540541 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 57 REST Original Motif Original Motif Backward 7 12 0.0558379 Original Motif 0.132621 0.109365 0.230044 0.52797 0.0363181 0.168441 0.0914214 0.70382 0.0475892 0.855354 0.0313087 0.0657483 0.906367 0.0187266 0.0586767 0.0162297 0.021197 0.0274314 0.945137 0.00623441 0.0760125 0.609346 0.201246 0.113396 0.980697 0.00435866 0.00747198 0.00747198 0.001868 0.987547 0.00747198 0.00311333 0.0217933 0.922167 0.0124533 0.0435866 0.568847 0.125234 0.100935 0.204984 0.136534 0.233791 0.0773067 0.552369 0.0243142 0.00436409 0.966958 0.00436409 0.0124688 0.00311721 0.983167 0.00124688 0.877105 0.069869 0.0212102 0.0318153 0.008125 0.8 0.145625 0.04625 0.98375 0.005625 0.004375 0.00625 0.0263488 0.00815558 0.959849 0.00564617 0.128688 0.632141 0.114878 0.124294 0.229899 0.0194724 0.432161 0.318467 0.133962 0.586792 0.200629 0.0786164 0.112579 0.700629 0.0232704 0.163522 Reverse Complement Motif 0.112579 0.0232704 0.700629 0.163522 0.133962 0.200629 0.586792 0.0786164 0.229899 0.432161 0.0194724 0.318467 0.128688 0.114878 0.632141 0.124294 0.0263488 0.959849 0.00815558 0.00564617 0.00625 0.005625 0.004375 0.98375 0.008125 0.145625 0.8 0.04625 0.0318153 0.069869 0.0212102 0.877105 0.0124688 0.983167 0.00311721 0.00124688 0.0243142 0.966958 0.00436409 0.00436409 0.552369 0.233791 0.0773067 0.136534 0.204984 0.125234 0.100935 0.568847 0.0217933 0.0124533 0.922167 0.0435866 0.001868 0.00747198 0.987547 0.00311333 0.00747198 0.00435866 0.00747198 0.980697 0.0760125 0.201246 0.609346 0.113396 0.021197 0.945137 0.0274314 0.00623441 0.0162297 0.0187266 0.0586767 0.906367 0.0475892 0.0313087 0.855354 0.0657483 0.70382 0.168441 0.0914214 0.0363181 0.52797 0.109365 0.230044 0.132621 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # 1 Motif ID 3 Motif Name Motif 3 Original Motif 0.239437 0.274648 0.0774649 0.408451 0.084507 0.65493 0.147887 0.112676 0.753521 0 0 0.246479 0.309859 0 0.65493 0.035211 0.302817 0.049296 0.584507 0.06338 0.542254 0.007042 0.394366 0.056338 0.457746 0.253521 0.190141 0.098592 0.584507 0.169014 0.232394 0.014085 0.274648 0.62676 0.0985919 0 0.852112 0 0.021127 0.126761 0 0.570423 0.429577 0 0.760563 0 0 0.239437 0.204225 0.021127 0.774648 0 Reverse Complement Motif 0.204225 0.774648 0.021127 0 0.239437 0 0 0.760563 0 0.429577 0.570423 0 0.126761 0 0.021127 0.852112 0.274648 0.0985919 0.62676 0 0.014085 0.169014 0.232394 0.584507 0.098592 0.253521 0.190141 0.457746 0.056338 0.007042 0.394366 0.542254 0.302817 0.584507 0.049296 0.06338 0.309859 0.65493 0 0.035211 0.246479 0 0 0.753521 0.084507 0.147887 0.65493 0.112676 0.408451 0.274648 0.0774649 0.239437 ******************************************************************* Best Matches for Significant Motif ID 3 (Highest to Lowest) ******************************************************************* Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 93 TFM12 Original Motif Original Motif Forward 7 13 0.00926418 Original Motif 0.380282 0.211268 0.373239 0.0352113 0.746479 0.0422535 0.119718 0.0915493 0.28169 0.0492958 0.56338 0.105634 0.21831 0 0.443662 0.338028 0.161972 0.126761 0.598592 0.112676 0.267606 0.528169 0.176056 0.028169 0.640845 0.028169 0.0915493 0.239437 0.0633803 0.084507 0.809859 0.0422535 0.366197 0.246479 0.211268 0.176056 0.471831 0.140845 0.309859 0.0774648 0.373239 0 0.542254 0.084507 0.211268 0.105634 0.605634 0.0774648 0.197183 0.302817 0.478873 0.0211268 0.408451 0.140845 0.387324 0.0633803 0.0985915 0.704225 0.197183 0 0.683099 0.028169 0.0704225 0.21831 0.140845 0.373239 0.485915 0 0.788732 0 0.0633803 0.147887 0 0.169014 0.816901 0.0140845 0.274648 0.295775 0.239437 0.190141 Reverse Complement Motif 0.274648 0.239437 0.295775 0.190141 0 0.816901 0.169014 0.0140845 0.147887 0 0.0633803 0.788732 0.140845 0.485915 0.373239 0 0.21831 0.028169 0.0704225 0.683099 0.0985915 0.197183 0.704225 0 0.0633803 0.140845 0.387324 0.408451 0.197183 0.478873 0.302817 0.0211268 0.211268 0.605634 0.105634 0.0774648 0.373239 0.542254 0 0.084507 0.0774648 0.140845 0.309859 0.471831 0.176056 0.246479 0.211268 0.366197 0.0633803 0.809859 0.084507 0.0422535 0.239437 0.028169 0.0915493 0.640845 0.267606 0.176056 0.528169 0.028169 0.161972 0.598592 0.126761 0.112676 0.21831 0.443662 0 0.338028 0.28169 0.56338 0.0492958 0.105634 0.0915493 0.0422535 0.119718 0.746479 0.0352113 0.211268 0.373239 0.380282 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 53 ESR1 Original Motif Original Motif Forward 4 13 0.0328703 Original Motif 0.261242 0.256959 0.329764 0.152034 0.228632 0.17094 0.350427 0.25 0.136752 0.369658 0.318376 0.175214 0.176596 0.487234 0.138298 0.197872 0.285106 0.493617 0.1 0.121277 0.651163 0.0591966 0.188161 0.10148 0.0759494 0.0168776 0.816456 0.0907173 0.04 0.0378947 0.884211 0.0378947 0.0694737 0.0863158 0.191579 0.652632 0.00842105 0.829474 0.111579 0.0505263 0.837895 0.0273684 0.0568421 0.0778947 0.122105 0.526316 0.225263 0.126316 0.132632 0.581053 0.111579 0.174737 0.134737 0.543158 0.204211 0.117895 0.0673684 0.04 0.0168421 0.875789 0.0442105 0.0463158 0.896842 0.0126316 0.642105 0.223158 0.0652632 0.0694737 0.0210526 0.917895 0.0252632 0.0357895 0.124211 0.743158 0.00421053 0.128421 0.0547368 0.347368 0.0463158 0.551579 Reverse Complement Motif 0.551579 0.347368 0.0463158 0.0547368 0.124211 0.00421053 0.743158 0.128421 0.0210526 0.0252632 0.917895 0.0357895 0.0694737 0.223158 0.0652632 0.642105 0.0442105 0.896842 0.0463158 0.0126316 0.875789 0.04 0.0168421 0.0673684 0.134737 0.204211 0.543158 0.117895 0.132632 0.111579 0.581053 0.174737 0.122105 0.225263 0.526316 0.126316 0.0778947 0.0273684 0.0568421 0.837895 0.00842105 0.111579 0.829474 0.0505263 0.652632 0.0863158 0.191579 0.0694737 0.04 0.884211 0.0378947 0.0378947 0.0759494 0.816456 0.0168776 0.0907173 0.10148 0.0591966 0.188161 0.651163 0.285106 0.1 0.493617 0.121277 0.176596 0.138298 0.487234 0.197872 0.136752 0.318376 0.369658 0.175214 0.228632 0.350427 0.17094 0.25 0.261242 0.329764 0.256959 0.152034 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Reverse Complement Forward 11 13 0.0400966 Original Motif 0.111111 0.746032 0.0634921 0.0793651 0.857143 0.047619 0.047619 0.047619 0.047619 0.857143 0.0793651 0.015873 0.031746 0 0 0.968254 0.031746 0.015873 0.904762 0.047619 0 0 0 1 0.031746 0 0.857143 0.111111 0.396825 0.111111 0.412698 0.0793651 0.031746 0.253968 0.015873 0.698413 0.365079 0 0.634921 0 0.0793651 0.206349 0.047619 0.666667 0.047619 0.936508 0.015873 0 0.952381 0 0.015873 0.031746 0.015873 0.920635 0 0.0634921 0.920635 0 0 0.0793651 0.0634921 0.047619 0.84127 0.047619 0 0 0.015873 0.984127 0.047619 0.015873 0.904762 0.031746 0.015873 0.603175 0.31746 0.0634921 0.396825 0 0.015873 0.587302 0.015873 0.47619 0.428571 0.0793651 0.0634921 0.920635 0 0.015873 0.920635 0.015873 0.047619 0.015873 0.0952381 0.68254 0.0952381 0.126984 0.047619 0.015873 0.0952381 0.84127 Reverse Complement Motif 0.84127 0.015873 0.0952381 0.047619 0.0952381 0.0952381 0.68254 0.126984 0.015873 0.015873 0.047619 0.920635 0.0634921 0 0.920635 0.015873 0.015873 0.428571 0.47619 0.0793651 0.587302 0 0.015873 0.396825 0.015873 0.31746 0.603175 0.0634921 0.047619 0.904762 0.015873 0.031746 0.984127 0 0.015873 0 0.0634921 0.84127 0.047619 0.047619 0.0793651 0 0 0.920635 0.015873 0 0.920635 0.0634921 0.031746 0 0.015873 0.952381 0.047619 0.015873 0.936508 0 0.666667 0.206349 0.047619 0.0793651 0.365079 0.634921 0 0 0.698413 0.253968 0.015873 0.031746 0.396825 0.412698 0.111111 0.0793651 0.031746 0.857143 0 0.111111 1 0 0 0 0.031746 0.904762 0.015873 0.047619 0.968254 0 0 0.031746 0.047619 0.0793651 0.857143 0.015873 0.047619 0.047619 0.047619 0.857143 0.111111 0.0634921 0.746032 0.0793651 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 90 TFM2 Original Motif Reverse Complement Backward 4 13 0.0435274 Original Motif 0.105634 0.514085 0.15493 0.225352 0.239437 0.408451 0.0985915 0.253521 0.302817 0.239437 0.0422535 0.415493 0.147887 0.598592 0.169014 0.084507 0.316901 0.422535 0.0211268 0.239437 0.0492958 0.380282 0.21831 0.352113 0.183099 0.133803 0.0915493 0.591549 0 0.598592 0.246479 0.15493 0.0704225 0.753521 0 0.176056 0.232394 0 0.0633803 0.704225 0 0.394366 0.556338 0.0492958 0.0352113 0.901408 0 0.0633803 0.056338 0.591549 0 0.352113 0.119718 0.246479 0.028169 0.605634 0.028169 0.626761 0.253521 0.0915493 0.211268 0 0.0774648 0.711268 0.0633803 0.190141 0.65493 0.0915493 0.126761 0.584507 0 0.288732 Reverse Complement Motif 0.126761 0 0.584507 0.288732 0.0633803 0.65493 0.190141 0.0915493 0.711268 0 0.0774648 0.211268 0.028169 0.253521 0.626761 0.0915493 0.605634 0.246479 0.028169 0.119718 0.056338 0 0.591549 0.352113 0.0352113 0 0.901408 0.0633803 0 0.556338 0.394366 0.0492958 0.704225 0 0.0633803 0.232394 0.0704225 0 0.753521 0.176056 0 0.246479 0.598592 0.15493 0.591549 0.133803 0.0915493 0.183099 0.0492958 0.21831 0.380282 0.352113 0.316901 0.0211268 0.422535 0.239437 0.147887 0.169014 0.598592 0.084507 0.415493 0.239437 0.0422535 0.302817 0.239437 0.0985915 0.408451 0.253521 0.105634 0.15493 0.514085 0.225352 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 66 CTCF Original Motif Original Motif Backward 1 13 0.0448341 Original Motif 0.0952903 0.318729 0.0832421 0.502738 0.182913 0.158817 0.45345 0.204819 0.307777 0.0536692 0.491785 0.146769 0.0613363 0.876232 0.0230011 0.0394304 0.00876232 0.989047 0 0.00219058 0.814896 0.0142388 0.0711939 0.0996714 0.0438116 0.578313 0.365827 0.0120482 0.117325 0.474781 0.0526316 0.355263 0.933114 0.0120614 0.0350877 0.0197368 0.00548847 0 0.991218 0.00329308 0.365532 0.00329308 0.621295 0.00987925 0.0592755 0.0131723 0.553238 0.374314 0.0131868 0 0.978022 0.00879121 0.0615385 0.00879121 0.851648 0.078022 0.114411 0.806381 0.00550055 0.0737074 0.409241 0.0143014 0.557756 0.0187019 0.0903084 0.530837 0.338106 0.0407489 0.128855 0.354626 0.0803965 0.436123 0.442731 0.199339 0.292952 0.064978 Reverse Complement Motif 0.064978 0.199339 0.292952 0.442731 0.436123 0.354626 0.0803965 0.128855 0.0903084 0.338106 0.530837 0.0407489 0.409241 0.557756 0.0143014 0.0187019 0.114411 0.00550055 0.806381 0.0737074 0.0615385 0.851648 0.00879121 0.078022 0.0131868 0.978022 0 0.00879121 0.0592755 0.553238 0.0131723 0.374314 0.365532 0.621295 0.00329308 0.00987925 0.00548847 0.991218 0 0.00329308 0.0197368 0.0120614 0.0350877 0.933114 0.117325 0.0526316 0.474781 0.355263 0.0438116 0.365827 0.578313 0.0120482 0.0996714 0.0142388 0.0711939 0.814896 0.00876232 0 0.989047 0.00219058 0.0613363 0.0230011 0.876232 0.0394304 0.307777 0.491785 0.0536692 0.146769 0.182913 0.45345 0.158817 0.204819 0.502738 0.318729 0.0832421 0.0952903 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 73 TGGAGCACTGTGACAcCACAGTGg Reverse Complement Reverse Complement Backward 9 13 0.045698 Original Motif 0.0540541 0.0405405 0.0540541 0.851351 0.0405405 0.0135135 0.824324 0.121622 0.0945946 0.135135 0.756757 0.0135135 0.891892 0 0 0.108108 0.0405405 0.0945946 0.810811 0.0540541 0.0810811 0.797297 0.0540541 0.0675676 0.932432 0.027027 0 0.0405405 0.0540541 0.756757 0.135135 0.0540541 0.108108 0.027027 0.0135135 0.851351 0.108108 0 0.851351 0.0405405 0.0135135 0 0.027027 0.959459 0 0.0135135 0.945946 0.0405405 0.905405 0 0.0675676 0.027027 0.0540541 0.837838 0 0.108108 0.945946 0.0135135 0.0405405 0 0.162162 0.5 0.189189 0.148649 0.108108 0.824324 0 0.0675676 0.945946 0 0.0405405 0.0135135 0.0810811 0.837838 0.027027 0.0540541 0.945946 0 0.0135135 0.0405405 0.0540541 0.0675676 0.783784 0.0945946 0.0540541 0.027027 0 0.918919 0.0405405 0.0135135 0.864865 0.0810811 0.148649 0.121622 0.675676 0.0540541 Reverse Complement Motif 0.148649 0.675676 0.121622 0.0540541 0.0405405 0.864865 0.0135135 0.0810811 0.918919 0.027027 0 0.0540541 0.0540541 0.783784 0.0675676 0.0945946 0.0405405 0 0.0135135 0.945946 0.0810811 0.027027 0.837838 0.0540541 0.0135135 0 0.0405405 0.945946 0.108108 0 0.824324 0.0675676 0.162162 0.189189 0.5 0.148649 0 0.0135135 0.0405405 0.945946 0.0540541 0 0.837838 0.108108 0.027027 0 0.0675676 0.905405 0 0.945946 0.0135135 0.0405405 0.959459 0 0.027027 0.0135135 0.108108 0.851351 0 0.0405405 0.851351 0.027027 0.0135135 0.108108 0.0540541 0.135135 0.756757 0.0540541 0.0405405 0.027027 0 0.932432 0.0810811 0.0540541 0.797297 0.0675676 0.0405405 0.810811 0.0945946 0.0540541 0.108108 0 0 0.891892 0.0945946 0.756757 0.135135 0.0135135 0.0405405 0.824324 0.0135135 0.121622 0.851351 0.0405405 0.0540541 0.0540541 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 64 PPARGRXRA Original Motif Original Motif Backward 3 13 0.0457253 Original Motif 0.109685 0.369895 0.373396 0.147025 0.117716 0.193473 0.148019 0.540793 0.453488 0.0267442 0.427907 0.0918605 0.116144 0.00348432 0.779326 0.101045 0.161253 0.0174014 0.781903 0.0394432 0.168213 0.149652 0.458237 0.223898 0.0822711 0.633835 0.207416 0.0764774 0.949015 0.0243337 0.0173812 0.00926999 0.604867 0.0556199 0.312862 0.0266512 0.825231 0.00578704 0.158565 0.0104167 0.0950174 0.0023175 0.88876 0.013905 0.0475087 0.0104287 0.803013 0.13905 0.0254925 0.114716 0.304751 0.555041 0.062645 0.643852 0.167053 0.12645 0.784223 0.0672854 0.0545244 0.0939675 Reverse Complement Motif 0.0939675 0.0672854 0.0545244 0.784223 0.062645 0.167053 0.643852 0.12645 0.555041 0.114716 0.304751 0.0254925 0.0475087 0.803013 0.0104287 0.13905 0.0950174 0.88876 0.0023175 0.013905 0.0104167 0.00578704 0.158565 0.825231 0.0266512 0.0556199 0.312862 0.604867 0.00926999 0.0243337 0.0173812 0.949015 0.0822711 0.207416 0.633835 0.0764774 0.168213 0.458237 0.149652 0.223898 0.161253 0.781903 0.0174014 0.0394432 0.116144 0.779326 0.00348432 0.101045 0.0918605 0.0267442 0.427907 0.453488 0.540793 0.193473 0.148019 0.117716 0.109685 0.373396 0.369895 0.147025 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 65 Tcfcp2l1 Reverse Complement Reverse Complement Backward 2 13 0.0477557 Original Motif 0.00196754 0.92548 0.0627152 0.00983768 0.069973 0.807513 0.00540142 0.117113 0.594508 0.00514832 0.275803 0.12454 0.0058838 0.0237803 0.967149 0.00318706 0.175477 0.33627 0.0256975 0.462555 0.0983847 0.28928 0.0621635 0.550171 0.173924 0.39726 0.151174 0.277642 0.357213 0.224939 0.252323 0.165526 0.63154 0.0696822 0.190954 0.107824 0.394421 0.0513824 0.310497 0.2437 0.00366928 0.933219 0.0547945 0.00831703 0.0617193 0.812148 0.00293902 0.123194 0.536555 0.00736016 0.305937 0.150147 0.0120393 0.0289926 0.954791 0.0041769 Reverse Complement Motif 0.0120393 0.954791 0.0289926 0.0041769 0.150147 0.00736016 0.305937 0.536555 0.0617193 0.00293902 0.812148 0.123194 0.00366928 0.0547945 0.933219 0.00831703 0.2437 0.0513824 0.310497 0.394421 0.107824 0.0696822 0.190954 0.63154 0.165526 0.224939 0.252323 0.357213 0.173924 0.151174 0.39726 0.277642 0.550171 0.28928 0.0621635 0.0983847 0.462555 0.33627 0.0256975 0.175477 0.0058838 0.967149 0.0237803 0.00318706 0.12454 0.00514832 0.275803 0.594508 0.069973 0.00540142 0.807513 0.117113 0.00196754 0.0627152 0.92548 0.00983768 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 94 TFM13 Original Motif Reverse Complement Forward 5 13 0.0478998 Original Motif 0.0714286 0.142857 0 0.785714 0.0714286 0.0714286 0 0.857143 0 0 0 1 0 0.0714286 0.285714 0.642857 0 0.142857 0 0.857143 0 0 0 1 0.0714286 0 0.0714286 0.857143 0.142857 0 0.357143 0.5 0.0714286 0 0 0.928571 0 0.0714286 0 0.928571 0 0 0.357143 0.642857 0 0 0 1 0 0 0.214286 0.785714 0.142857 0 0 0.857143 0.571429 0.0714286 0.214286 0.142857 0.857143 0 0 0.142857 0.142857 0 0.285714 0.571429 0 0.0714286 0.285714 0.642857 0.357143 0.357143 0.0714286 0.214286 0.428571 0 0.0714286 0.5 Reverse Complement Motif 0.5 0 0.0714286 0.428571 0.214286 0.357143 0.0714286 0.357143 0.642857 0.0714286 0.285714 0 0.571429 0 0.285714 0.142857 0.142857 0 0 0.857143 0.142857 0.0714286 0.214286 0.571429 0.857143 0 0 0.142857 0.785714 0 0.214286 0 1 0 0 0 0.642857 0 0.357143 0 0.928571 0.0714286 0 0 0.928571 0 0 0.0714286 0.5 0 0.357143 0.142857 0.857143 0 0.0714286 0.0714286 1 0 0 0 0.857143 0.142857 0 0 0.642857 0.0714286 0.285714 0 1 0 0 0 0.857143 0.0714286 0 0.0714286 0.785714 0.142857 0 0.0714286 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 88 TFF11 Original Motif Reverse Complement Backward 1 13 0.048132 Original Motif 0.0985915 0.556338 0.246479 0.0985915 0.28169 0.00704225 0.0985915 0.612676 0.00704225 0.0211268 0.971831 0 0.00704225 0.971831 0.00704225 0.0140845 0.00704225 0 0 0.992958 0 0 1 0 0.176056 0.415493 0.232394 0.176056 0.267606 0.197183 0.267606 0.267606 0.119718 0.190141 0.401408 0.288732 0.0985915 0.43662 0.211268 0.253521 0.239437 0.15493 0.183099 0.422535 0.126761 0.140845 0.619718 0.112676 0.190141 0.28169 0.225352 0.302817 0.232394 0.176056 0.373239 0.21831 Reverse Complement Motif 0.232394 0.373239 0.176056 0.21831 0.302817 0.28169 0.225352 0.190141 0.126761 0.619718 0.140845 0.112676 0.422535 0.15493 0.183099 0.239437 0.0985915 0.211268 0.43662 0.253521 0.119718 0.401408 0.190141 0.288732 0.267606 0.197183 0.267606 0.267606 0.176056 0.232394 0.415493 0.176056 0 1 0 0 0.992958 0 0 0.00704225 0.00704225 0.00704225 0.971831 0.0140845 0.00704225 0.971831 0.0211268 0 0.612676 0.00704225 0.0985915 0.28169 0.0985915 0.246479 0.556338 0.0985915 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # 3 Motif ID 61 Motif Name NR4A2 Original Motif 0.615385 0.0769231 0.230769 0.0769231 0.928571 0 0.0714286 0 0 0 0.928571 0.0714286 0.214286 0 0.785714 0 0.142857 0.142857 0 0.714286 0 0.928571 0 0.0714286 1 0 0 0 0.230769 0.615385 0.153846 0 Reverse Complement Motif 0.230769 0.153846 0.615385 0 0 0 0 1 0 0 0.928571 0.0714286 0.714286 0.142857 0 0.142857 0.214286 0.785714 0 0 0 0.928571 0 0.0714286 0 0 0.0714286 0.928571 0.0769231 0.0769231 0.230769 0.615385 ******************************************************************* Best Matches for Significant Motif ID 61 (Highest to Lowest) ******************************************************************* Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 60 NR1H2RXRA Original Motif Original Motif Backward 9 8 0.0167759 Original Motif 0.68 0.2 0 0.12 0.68 0.04 0.2 0.08 0.8 0 0.2 0 0 0 1 0 0 0 0.96 0.04 0 0 0 1 0 1 0 0 1 0 0 0 0.96 0 0 0.04 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 1 0 0 1 0 0 0 0.8 0.04 0.08 0.08 0 0.6 0.24 0.16 Reverse Complement Motif 0 0.24 0.6 0.16 0.08 0.04 0.08 0.8 0 0 0 1 0 0 1 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0.04 0 0 0.96 0 0 0 1 0 0 1 0 1 0 0 0 0 0.96 0 0.04 0 1 0 0 0 0 0.2 0.8 0.08 0.04 0.2 0.68 0.12 0.2 0 0.68 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 53 ESR1 Original Motif Original Motif Forward 5 8 0.0195235 Original Motif 0.261242 0.256959 0.329764 0.152034 0.228632 0.17094 0.350427 0.25 0.136752 0.369658 0.318376 0.175214 0.176596 0.487234 0.138298 0.197872 0.285106 0.493617 0.1 0.121277 0.651163 0.0591966 0.188161 0.10148 0.0759494 0.0168776 0.816456 0.0907173 0.04 0.0378947 0.884211 0.0378947 0.0694737 0.0863158 0.191579 0.652632 0.00842105 0.829474 0.111579 0.0505263 0.837895 0.0273684 0.0568421 0.0778947 0.122105 0.526316 0.225263 0.126316 0.132632 0.581053 0.111579 0.174737 0.134737 0.543158 0.204211 0.117895 0.0673684 0.04 0.0168421 0.875789 0.0442105 0.0463158 0.896842 0.0126316 0.642105 0.223158 0.0652632 0.0694737 0.0210526 0.917895 0.0252632 0.0357895 0.124211 0.743158 0.00421053 0.128421 0.0547368 0.347368 0.0463158 0.551579 Reverse Complement Motif 0.551579 0.347368 0.0463158 0.0547368 0.124211 0.00421053 0.743158 0.128421 0.0210526 0.0252632 0.917895 0.0357895 0.0694737 0.223158 0.0652632 0.642105 0.0442105 0.896842 0.0463158 0.0126316 0.875789 0.04 0.0168421 0.0673684 0.134737 0.204211 0.543158 0.117895 0.132632 0.111579 0.581053 0.174737 0.122105 0.225263 0.526316 0.126316 0.0778947 0.0273684 0.0568421 0.837895 0.00842105 0.111579 0.829474 0.0505263 0.652632 0.0863158 0.191579 0.0694737 0.04 0.884211 0.0378947 0.0378947 0.0759494 0.816456 0.0168776 0.0907173 0.10148 0.0591966 0.188161 0.651163 0.285106 0.1 0.493617 0.121277 0.176596 0.138298 0.487234 0.197872 0.136752 0.318376 0.369658 0.175214 0.228632 0.350427 0.17094 0.25 0.261242 0.329764 0.256959 0.152034 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 59 ESR2 Original Motif Original Motif Forward 2 8 0.0198372 Original Motif 0.218487 0.45098 0.176471 0.154062 0.442577 0.142857 0.114846 0.29972 0.521008 0.0420168 0.431373 0.00560224 0.0756303 0 0.770308 0.154062 0.0504202 0.0560224 0.893557 0 0.0364146 0.0532213 0.092437 0.817927 0 1 0 0 0.943978 0.00280112 0 0.0532213 0.137255 0.344538 0.316527 0.201681 0.179272 0.176471 0.417367 0.226891 0.145658 0.170868 0.411765 0.271709 0.0588235 0.092437 0.0672269 0.781513 0.176471 0.070028 0.742297 0.0112045 0.498599 0.277311 0.0532213 0.170868 0.0952381 0.7507 0.00560224 0.148459 0.128852 0.809524 0 0.0616246 0.0756303 0.252101 0 0.672269 0.168067 0.263305 0.380952 0.187675 Reverse Complement Motif 0.168067 0.380952 0.263305 0.187675 0.672269 0.252101 0 0.0756303 0.128852 0 0.809524 0.0616246 0.0952381 0.00560224 0.7507 0.148459 0.170868 0.277311 0.0532213 0.498599 0.176471 0.742297 0.070028 0.0112045 0.781513 0.092437 0.0672269 0.0588235 0.145658 0.411765 0.170868 0.271709 0.179272 0.417367 0.176471 0.226891 0.137255 0.316527 0.344538 0.201681 0.0532213 0.00280112 0 0.943978 0 0 1 0 0.817927 0.0532213 0.092437 0.0364146 0.0504202 0.893557 0.0560224 0 0.0756303 0.770308 0 0.154062 0.00560224 0.0420168 0.431373 0.521008 0.29972 0.142857 0.114846 0.442577 0.218487 0.176471 0.45098 0.154062 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 17 Motif 17 Reverse Complement Original Motif Forward 1 8 0.0393171 Original Motif 0 1 0 0 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 1 0 0 Reverse Complement Motif 0 0 1 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 1 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 15 Motif 15 Original Motif Original Motif Backward 5 8 0.040519 Original Motif 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0.5 0 0.5 0 0 0 0 1 0.5 0.5 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 1 1 0 0 0 Reverse Complement Motif 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0.5 0 0.5 1 0 0 0 0 0 0.5 0.5 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 64 PPARGRXRA Original Motif Original Motif Forward 2 8 0.0495607 Original Motif 0.109685 0.369895 0.373396 0.147025 0.117716 0.193473 0.148019 0.540793 0.453488 0.0267442 0.427907 0.0918605 0.116144 0.00348432 0.779326 0.101045 0.161253 0.0174014 0.781903 0.0394432 0.168213 0.149652 0.458237 0.223898 0.0822711 0.633835 0.207416 0.0764774 0.949015 0.0243337 0.0173812 0.00926999 0.604867 0.0556199 0.312862 0.0266512 0.825231 0.00578704 0.158565 0.0104167 0.0950174 0.0023175 0.88876 0.013905 0.0475087 0.0104287 0.803013 0.13905 0.0254925 0.114716 0.304751 0.555041 0.062645 0.643852 0.167053 0.12645 0.784223 0.0672854 0.0545244 0.0939675 Reverse Complement Motif 0.0939675 0.0672854 0.0545244 0.784223 0.062645 0.167053 0.643852 0.12645 0.555041 0.114716 0.304751 0.0254925 0.0475087 0.803013 0.0104287 0.13905 0.0950174 0.88876 0.0023175 0.013905 0.0104167 0.00578704 0.158565 0.825231 0.0266512 0.0556199 0.312862 0.604867 0.00926999 0.0243337 0.0173812 0.949015 0.0822711 0.207416 0.633835 0.0764774 0.168213 0.458237 0.149652 0.223898 0.161253 0.781903 0.0174014 0.0394432 0.116144 0.779326 0.00348432 0.101045 0.0918605 0.0267442 0.427907 0.453488 0.540793 0.193473 0.148019 0.117716 0.109685 0.373396 0.369895 0.147025 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 24 Motif 24 Reverse Complement Reverse Complement Forward 4 8 0.0539119 Original Motif 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0.5 0 0 0.5 0 1 0 0 1 0 0 0 0 0 0 1 0.5 0 0 0.5 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 0.5 0 0 0.5 1 0 0 0 0 0 0 1 0 0 1 0 0.5 0 0 0.5 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Original Motif Backward 12 8 0.0557243 Original Motif 0.111111 0.746032 0.0634921 0.0793651 0.857143 0.047619 0.047619 0.047619 0.047619 0.857143 0.0793651 0.015873 0.031746 0 0 0.968254 0.031746 0.015873 0.904762 0.047619 0 0 0 1 0.031746 0 0.857143 0.111111 0.396825 0.111111 0.412698 0.0793651 0.031746 0.253968 0.015873 0.698413 0.365079 0 0.634921 0 0.0793651 0.206349 0.047619 0.666667 0.047619 0.936508 0.015873 0 0.952381 0 0.015873 0.031746 0.015873 0.920635 0 0.0634921 0.920635 0 0 0.0793651 0.0634921 0.047619 0.84127 0.047619 0 0 0.015873 0.984127 0.047619 0.015873 0.904762 0.031746 0.015873 0.603175 0.31746 0.0634921 0.396825 0 0.015873 0.587302 0.015873 0.47619 0.428571 0.0793651 0.0634921 0.920635 0 0.015873 0.920635 0.015873 0.047619 0.015873 0.0952381 0.68254 0.0952381 0.126984 0.047619 0.015873 0.0952381 0.84127 Reverse Complement Motif 0.84127 0.015873 0.0952381 0.047619 0.0952381 0.0952381 0.68254 0.126984 0.015873 0.015873 0.047619 0.920635 0.0634921 0 0.920635 0.015873 0.015873 0.428571 0.47619 0.0793651 0.587302 0 0.015873 0.396825 0.015873 0.31746 0.603175 0.0634921 0.047619 0.904762 0.015873 0.031746 0.984127 0 0.015873 0 0.0634921 0.84127 0.047619 0.047619 0.0793651 0 0 0.920635 0.015873 0 0.920635 0.0634921 0.031746 0 0.015873 0.952381 0.047619 0.015873 0.936508 0 0.666667 0.206349 0.047619 0.0793651 0.365079 0.634921 0 0 0.698413 0.253968 0.015873 0.031746 0.396825 0.412698 0.111111 0.0793651 0.031746 0.857143 0 0.111111 1 0 0 0 0.031746 0.904762 0.015873 0.047619 0.968254 0 0 0.031746 0.047619 0.0793651 0.857143 0.015873 0.047619 0.047619 0.047619 0.857143 0.111111 0.0634921 0.746032 0.0793651 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 52 NR2F1 Original Motif Reverse Complement Backward 1 8 0.0564874 Original Motif 0 0 0.153846 0.846154 0.0769231 0 0.923077 0 0.923077 0 0.0769231 0 0.461538 0.538462 0 0 0 1 0 0 0 0.230769 0 0.769231 0 0.153846 0 0.846154 0.0769231 0 0 0.923077 0.153846 0 0.846154 0 0.461538 0.307692 0.230769 0 0.461538 0.384615 0.0769231 0.0769231 0.0769231 0.769231 0.0769231 0.0769231 0.230769 0.461538 0 0.307692 0 0.230769 0.230769 0.538462 Reverse Complement Motif 0.538462 0.230769 0.230769 0 0.230769 0 0.461538 0.307692 0.0769231 0.0769231 0.769231 0.0769231 0.0769231 0.384615 0.0769231 0.461538 0 0.307692 0.230769 0.461538 0.153846 0.846154 0 0 0.923077 0 0 0.0769231 0.846154 0.153846 0 0 0.769231 0.230769 0 0 0 0 1 0 0.461538 0 0.538462 0 0 0 0.0769231 0.923077 0.0769231 0.923077 0 0 0.846154 0 0.153846 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 35 Motif 35 Reverse Complement Original Motif Forward 2 8 0.0566591 Original Motif 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0.5 0 0.5 0 0 0 1 0 1 0 0 0 0 0 1 0 0 0 1 0 0 1 0 Reverse Complement Motif 0 1 0 0 1 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0.5 0.5 0 1 0 0 1 0 0 0 0 0 0 1 0 1 0 0 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # 2 Motif ID 48 Motif Name Motif 48 Original Motif 0.02381 0 0.97619 0 0.238095 0.714286 0 0.047619 0.95238 0.02381 0 0.02381 0.380952 0.142857 0.452381 0.02381 0.52381 0.190476 0.285714 0 0.095238 0.047619 0.619048 0.238095 0 0.02381 0.904761 0.0714289 0 0.571429 0.428571 0 0.97619 0.02381 0 0 0.333333 0 0.666667 0 0 0.428571 0.571429 0 Reverse Complement Motif 0 0.571429 0.428571 0 0.333333 0.666667 0 0 0 0.02381 0 0.97619 0 0.428571 0.571429 0 0 0.904761 0.02381 0.0714289 0.095238 0.619048 0.047619 0.238095 0 0.190476 0.285714 0.52381 0.380952 0.452381 0.142857 0.02381 0.02381 0.02381 0 0.95238 0.238095 0 0.714286 0.047619 0.02381 0.97619 0 0 ******************************************************************* Best Matches for Significant Motif ID 48 (Highest to Lowest) ******************************************************************* Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 1 Motif 1 Original Motif Reverse Complement Forward 1 11 0 Original Motif 0 0.598592 0.176056 0.225352 0 0.626761 0 0.373239 0 0 0 1 0 0.408451 0.514084 0.0774649 0.091549 0.823944 0.028169 0.056338 0.133803 0.690141 0 0.176056 0.042254 0.28169 0 0.676056 0.007042 0.683099 0.197183 0.112676 0.197183 0 0 0.802817 0 0.084507 0.690141 0.225352 0.091549 0.605634 0.169014 0.133803 Reverse Complement Motif 0.091549 0.169014 0.605634 0.133803 0 0.690141 0.084507 0.225352 0.802817 0 0 0.197183 0.007042 0.197183 0.683099 0.112676 0.676056 0.28169 0 0.042254 0.133803 0 0.690141 0.176056 0.091549 0.028169 0.823944 0.056338 0 0.514084 0.408451 0.0774649 1 0 0 0 0 0 0.626761 0.373239 0 0.176056 0.598592 0.225352 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 90 TFM2 Original Motif Reverse Complement Backward 8 11 0.000952693 Original Motif 0.105634 0.514085 0.15493 0.225352 0.239437 0.408451 0.0985915 0.253521 0.302817 0.239437 0.0422535 0.415493 0.147887 0.598592 0.169014 0.084507 0.316901 0.422535 0.0211268 0.239437 0.0492958 0.380282 0.21831 0.352113 0.183099 0.133803 0.0915493 0.591549 0 0.598592 0.246479 0.15493 0.0704225 0.753521 0 0.176056 0.232394 0 0.0633803 0.704225 0 0.394366 0.556338 0.0492958 0.0352113 0.901408 0 0.0633803 0.056338 0.591549 0 0.352113 0.119718 0.246479 0.028169 0.605634 0.028169 0.626761 0.253521 0.0915493 0.211268 0 0.0774648 0.711268 0.0633803 0.190141 0.65493 0.0915493 0.126761 0.584507 0 0.288732 Reverse Complement Motif 0.126761 0 0.584507 0.288732 0.0633803 0.65493 0.190141 0.0915493 0.711268 0 0.0774648 0.211268 0.028169 0.253521 0.626761 0.0915493 0.605634 0.246479 0.028169 0.119718 0.056338 0 0.591549 0.352113 0.0352113 0 0.901408 0.0633803 0 0.556338 0.394366 0.0492958 0.704225 0 0.0633803 0.232394 0.0704225 0 0.753521 0.176056 0 0.246479 0.598592 0.15493 0.591549 0.133803 0.0915493 0.183099 0.0492958 0.21831 0.380282 0.352113 0.316901 0.0211268 0.422535 0.239437 0.147887 0.169014 0.598592 0.084507 0.415493 0.239437 0.0422535 0.302817 0.239437 0.0985915 0.408451 0.253521 0.105634 0.15493 0.514085 0.225352 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 66 CTCF Original Motif Original Motif Forward 7 11 0.033658 Original Motif 0.0952903 0.318729 0.0832421 0.502738 0.182913 0.158817 0.45345 0.204819 0.307777 0.0536692 0.491785 0.146769 0.0613363 0.876232 0.0230011 0.0394304 0.00876232 0.989047 0 0.00219058 0.814896 0.0142388 0.0711939 0.0996714 0.0438116 0.578313 0.365827 0.0120482 0.117325 0.474781 0.0526316 0.355263 0.933114 0.0120614 0.0350877 0.0197368 0.00548847 0 0.991218 0.00329308 0.365532 0.00329308 0.621295 0.00987925 0.0592755 0.0131723 0.553238 0.374314 0.0131868 0 0.978022 0.00879121 0.0615385 0.00879121 0.851648 0.078022 0.114411 0.806381 0.00550055 0.0737074 0.409241 0.0143014 0.557756 0.0187019 0.0903084 0.530837 0.338106 0.0407489 0.128855 0.354626 0.0803965 0.436123 0.442731 0.199339 0.292952 0.064978 Reverse Complement Motif 0.064978 0.199339 0.292952 0.442731 0.436123 0.354626 0.0803965 0.128855 0.0903084 0.338106 0.530837 0.0407489 0.409241 0.557756 0.0143014 0.0187019 0.114411 0.00550055 0.806381 0.0737074 0.0615385 0.851648 0.00879121 0.078022 0.0131868 0.978022 0 0.00879121 0.0592755 0.553238 0.0131723 0.374314 0.365532 0.621295 0.00329308 0.00987925 0.00548847 0.991218 0 0.00329308 0.0197368 0.0120614 0.0350877 0.933114 0.117325 0.0526316 0.474781 0.355263 0.0438116 0.365827 0.578313 0.0120482 0.0996714 0.0142388 0.0711939 0.814896 0.00876232 0 0.989047 0.00219058 0.0613363 0.0230011 0.876232 0.0394304 0.307777 0.491785 0.0536692 0.146769 0.182913 0.45345 0.158817 0.204819 0.502738 0.318729 0.0832421 0.0952903 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 88 TFF11 Reverse Complement Original Motif Backward 2 11 0.0410341 Original Motif 0.0985915 0.556338 0.246479 0.0985915 0.28169 0.00704225 0.0985915 0.612676 0.00704225 0.0211268 0.971831 0 0.00704225 0.971831 0.00704225 0.0140845 0.00704225 0 0 0.992958 0 0 1 0 0.176056 0.415493 0.232394 0.176056 0.267606 0.197183 0.267606 0.267606 0.119718 0.190141 0.401408 0.288732 0.0985915 0.43662 0.211268 0.253521 0.239437 0.15493 0.183099 0.422535 0.126761 0.140845 0.619718 0.112676 0.190141 0.28169 0.225352 0.302817 0.232394 0.176056 0.373239 0.21831 Reverse Complement Motif 0.232394 0.373239 0.176056 0.21831 0.302817 0.28169 0.225352 0.190141 0.126761 0.619718 0.140845 0.112676 0.422535 0.15493 0.183099 0.239437 0.0985915 0.211268 0.43662 0.253521 0.119718 0.401408 0.190141 0.288732 0.267606 0.197183 0.267606 0.267606 0.176056 0.232394 0.415493 0.176056 0 1 0 0 0.992958 0 0 0.00704225 0.00704225 0.00704225 0.971831 0.0140845 0.00704225 0.971831 0.0211268 0 0.612676 0.00704225 0.0985915 0.28169 0.0985915 0.246479 0.556338 0.0985915 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 93 TFM12 Original Motif Original Motif Forward 5 11 0.0422459 Original Motif 0.380282 0.211268 0.373239 0.0352113 0.746479 0.0422535 0.119718 0.0915493 0.28169 0.0492958 0.56338 0.105634 0.21831 0 0.443662 0.338028 0.161972 0.126761 0.598592 0.112676 0.267606 0.528169 0.176056 0.028169 0.640845 0.028169 0.0915493 0.239437 0.0633803 0.084507 0.809859 0.0422535 0.366197 0.246479 0.211268 0.176056 0.471831 0.140845 0.309859 0.0774648 0.373239 0 0.542254 0.084507 0.211268 0.105634 0.605634 0.0774648 0.197183 0.302817 0.478873 0.0211268 0.408451 0.140845 0.387324 0.0633803 0.0985915 0.704225 0.197183 0 0.683099 0.028169 0.0704225 0.21831 0.140845 0.373239 0.485915 0 0.788732 0 0.0633803 0.147887 0 0.169014 0.816901 0.0140845 0.274648 0.295775 0.239437 0.190141 Reverse Complement Motif 0.274648 0.239437 0.295775 0.190141 0 0.816901 0.169014 0.0140845 0.147887 0 0.0633803 0.788732 0.140845 0.485915 0.373239 0 0.21831 0.028169 0.0704225 0.683099 0.0985915 0.197183 0.704225 0 0.0633803 0.140845 0.387324 0.408451 0.197183 0.478873 0.302817 0.0211268 0.211268 0.605634 0.105634 0.0774648 0.373239 0.542254 0 0.084507 0.0774648 0.140845 0.309859 0.471831 0.176056 0.246479 0.211268 0.366197 0.0633803 0.809859 0.084507 0.0422535 0.239437 0.028169 0.0915493 0.640845 0.267606 0.176056 0.528169 0.028169 0.161972 0.598592 0.126761 0.112676 0.21831 0.443662 0 0.338028 0.28169 0.56338 0.0492958 0.105634 0.0915493 0.0422535 0.119718 0.746479 0.0352113 0.211268 0.373239 0.380282 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 65 Tcfcp2l1 Reverse Complement Original Motif Backward 4 11 0.0533531 Original Motif 0.00196754 0.92548 0.0627152 0.00983768 0.069973 0.807513 0.00540142 0.117113 0.594508 0.00514832 0.275803 0.12454 0.0058838 0.0237803 0.967149 0.00318706 0.175477 0.33627 0.0256975 0.462555 0.0983847 0.28928 0.0621635 0.550171 0.173924 0.39726 0.151174 0.277642 0.357213 0.224939 0.252323 0.165526 0.63154 0.0696822 0.190954 0.107824 0.394421 0.0513824 0.310497 0.2437 0.00366928 0.933219 0.0547945 0.00831703 0.0617193 0.812148 0.00293902 0.123194 0.536555 0.00736016 0.305937 0.150147 0.0120393 0.0289926 0.954791 0.0041769 Reverse Complement Motif 0.0120393 0.954791 0.0289926 0.0041769 0.150147 0.00736016 0.305937 0.536555 0.0617193 0.00293902 0.812148 0.123194 0.00366928 0.0547945 0.933219 0.00831703 0.2437 0.0513824 0.310497 0.394421 0.107824 0.0696822 0.190954 0.63154 0.165526 0.224939 0.252323 0.357213 0.173924 0.151174 0.39726 0.277642 0.550171 0.28928 0.0621635 0.0983847 0.462555 0.33627 0.0256975 0.175477 0.0058838 0.967149 0.0237803 0.00318706 0.12454 0.00514832 0.275803 0.594508 0.069973 0.00540142 0.807513 0.117113 0.00196754 0.0627152 0.92548 0.00983768 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 57 REST Reverse Complement Reverse Complement Backward 8 11 0.0578944 Original Motif 0.132621 0.109365 0.230044 0.52797 0.0363181 0.168441 0.0914214 0.70382 0.0475892 0.855354 0.0313087 0.0657483 0.906367 0.0187266 0.0586767 0.0162297 0.021197 0.0274314 0.945137 0.00623441 0.0760125 0.609346 0.201246 0.113396 0.980697 0.00435866 0.00747198 0.00747198 0.001868 0.987547 0.00747198 0.00311333 0.0217933 0.922167 0.0124533 0.0435866 0.568847 0.125234 0.100935 0.204984 0.136534 0.233791 0.0773067 0.552369 0.0243142 0.00436409 0.966958 0.00436409 0.0124688 0.00311721 0.983167 0.00124688 0.877105 0.069869 0.0212102 0.0318153 0.008125 0.8 0.145625 0.04625 0.98375 0.005625 0.004375 0.00625 0.0263488 0.00815558 0.959849 0.00564617 0.128688 0.632141 0.114878 0.124294 0.229899 0.0194724 0.432161 0.318467 0.133962 0.586792 0.200629 0.0786164 0.112579 0.700629 0.0232704 0.163522 Reverse Complement Motif 0.112579 0.0232704 0.700629 0.163522 0.133962 0.200629 0.586792 0.0786164 0.229899 0.432161 0.0194724 0.318467 0.128688 0.114878 0.632141 0.124294 0.0263488 0.959849 0.00815558 0.00564617 0.00625 0.005625 0.004375 0.98375 0.008125 0.145625 0.8 0.04625 0.0318153 0.069869 0.0212102 0.877105 0.0124688 0.983167 0.00311721 0.00124688 0.0243142 0.966958 0.00436409 0.00436409 0.552369 0.233791 0.0773067 0.136534 0.204984 0.125234 0.100935 0.568847 0.0217933 0.0124533 0.922167 0.0435866 0.001868 0.00747198 0.987547 0.00311333 0.00747198 0.00435866 0.00747198 0.980697 0.0760125 0.201246 0.609346 0.113396 0.021197 0.945137 0.0274314 0.00623441 0.0162297 0.0187266 0.0586767 0.906367 0.0475892 0.0313087 0.855354 0.0657483 0.70382 0.168441 0.0914214 0.0363181 0.52797 0.109365 0.230044 0.132621 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 53 ESR1 Original Motif Original Motif Backward 8 11 0.0620615 Original Motif 0.261242 0.256959 0.329764 0.152034 0.228632 0.17094 0.350427 0.25 0.136752 0.369658 0.318376 0.175214 0.176596 0.487234 0.138298 0.197872 0.285106 0.493617 0.1 0.121277 0.651163 0.0591966 0.188161 0.10148 0.0759494 0.0168776 0.816456 0.0907173 0.04 0.0378947 0.884211 0.0378947 0.0694737 0.0863158 0.191579 0.652632 0.00842105 0.829474 0.111579 0.0505263 0.837895 0.0273684 0.0568421 0.0778947 0.122105 0.526316 0.225263 0.126316 0.132632 0.581053 0.111579 0.174737 0.134737 0.543158 0.204211 0.117895 0.0673684 0.04 0.0168421 0.875789 0.0442105 0.0463158 0.896842 0.0126316 0.642105 0.223158 0.0652632 0.0694737 0.0210526 0.917895 0.0252632 0.0357895 0.124211 0.743158 0.00421053 0.128421 0.0547368 0.347368 0.0463158 0.551579 Reverse Complement Motif 0.551579 0.347368 0.0463158 0.0547368 0.124211 0.00421053 0.743158 0.128421 0.0210526 0.0252632 0.917895 0.0357895 0.0694737 0.223158 0.0652632 0.642105 0.0442105 0.896842 0.0463158 0.0126316 0.875789 0.04 0.0168421 0.0673684 0.134737 0.204211 0.543158 0.117895 0.132632 0.111579 0.581053 0.174737 0.122105 0.225263 0.526316 0.126316 0.0778947 0.0273684 0.0568421 0.837895 0.00842105 0.111579 0.829474 0.0505263 0.652632 0.0863158 0.191579 0.0694737 0.04 0.884211 0.0378947 0.0378947 0.0759494 0.816456 0.0168776 0.0907173 0.10148 0.0591966 0.188161 0.651163 0.285106 0.1 0.493617 0.121277 0.176596 0.138298 0.487234 0.197872 0.136752 0.318376 0.369658 0.175214 0.228632 0.350427 0.17094 0.25 0.261242 0.329764 0.256959 0.152034 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 3 Motif 3 Original Motif Original Motif Backward 3 11 0.0627554 Original Motif 0.239437 0.274648 0.0774649 0.408451 0.084507 0.65493 0.147887 0.112676 0.753521 0 0 0.246479 0.309859 0 0.65493 0.035211 0.302817 0.049296 0.584507 0.06338 0.542254 0.007042 0.394366 0.056338 0.457746 0.253521 0.190141 0.098592 0.584507 0.169014 0.232394 0.014085 0.274648 0.62676 0.0985919 0 0.852112 0 0.021127 0.126761 0 0.570423 0.429577 0 0.760563 0 0 0.239437 0.204225 0.021127 0.774648 0 Reverse Complement Motif 0.204225 0.774648 0.021127 0 0.239437 0 0 0.760563 0 0.429577 0.570423 0 0.126761 0 0.021127 0.852112 0.274648 0.0985919 0.62676 0 0.014085 0.169014 0.232394 0.584507 0.098592 0.253521 0.190141 0.457746 0.056338 0.007042 0.394366 0.542254 0.302817 0.584507 0.049296 0.06338 0.309859 0.65493 0 0.035211 0.246479 0 0 0.753521 0.084507 0.147887 0.65493 0.112676 0.408451 0.274648 0.0774649 0.239437 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 59 ESR2 Reverse Complement Original Motif Forward 4 11 0.0646979 Original Motif 0.218487 0.45098 0.176471 0.154062 0.442577 0.142857 0.114846 0.29972 0.521008 0.0420168 0.431373 0.00560224 0.0756303 0 0.770308 0.154062 0.0504202 0.0560224 0.893557 0 0.0364146 0.0532213 0.092437 0.817927 0 1 0 0 0.943978 0.00280112 0 0.0532213 0.137255 0.344538 0.316527 0.201681 0.179272 0.176471 0.417367 0.226891 0.145658 0.170868 0.411765 0.271709 0.0588235 0.092437 0.0672269 0.781513 0.176471 0.070028 0.742297 0.0112045 0.498599 0.277311 0.0532213 0.170868 0.0952381 0.7507 0.00560224 0.148459 0.128852 0.809524 0 0.0616246 0.0756303 0.252101 0 0.672269 0.168067 0.263305 0.380952 0.187675 Reverse Complement Motif 0.168067 0.380952 0.263305 0.187675 0.672269 0.252101 0 0.0756303 0.128852 0 0.809524 0.0616246 0.0952381 0.00560224 0.7507 0.148459 0.170868 0.277311 0.0532213 0.498599 0.176471 0.742297 0.070028 0.0112045 0.781513 0.092437 0.0672269 0.0588235 0.145658 0.411765 0.170868 0.271709 0.179272 0.417367 0.176471 0.226891 0.137255 0.316527 0.344538 0.201681 0.0532213 0.00280112 0 0.943978 0 0 1 0 0.817927 0.0532213 0.092437 0.0364146 0.0504202 0.893557 0.0560224 0 0.0756303 0.770308 0 0.154062 0.00560224 0.0420168 0.431373 0.521008 0.29972 0.142857 0.114846 0.442577 0.218487 0.176471 0.45098 0.154062 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # 4 Motif ID 78 Motif Name ssGCkTGCssk Original Motif 0 0.5 0.5 0 0 0.5 0.5 0 0 0 1 0 0 1 0 0 0 0 0.5 0.5 0 0 0 1 0 0 1 0 0 1 0 0 0 0.5 0.5 0 0 0.5 0.5 0 0 0 0.5 0.5 Reverse Complement Motif 0 0.5 0 0.5 0 0.5 0.5 0 0 0.5 0.5 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0.5 0 0.5 0 0 1 0 0 1 0 0 0 0.5 0.5 0 0 0.5 0.5 0 ******************************************************************* Best Matches for Significant Motif ID 78 (Highest to Lowest) ******************************************************************* Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 82 gCGCGCsCgsG Original Motif Original Motif Forward 1 11 0.0230178 Original Motif 0.105263 0.210526 0.526316 0.157895 0 0.736842 0.105263 0.157895 0 0 1 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0.368421 0.631579 0 0 0.894737 0.105263 0 0.157895 0.157895 0.631579 0.0526316 0.0526316 0.631579 0.263158 0.0526316 0.105263 0.0526316 0.789474 0.0526316 Reverse Complement Motif 0.105263 0.789474 0.0526316 0.0526316 0.0526316 0.263158 0.631579 0.0526316 0.157895 0.631579 0.157895 0.0526316 0 0.105263 0.894737 0 0 0.631579 0.368421 0 0 0 1 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0.105263 0.736842 0.157895 0.105263 0.526316 0.210526 0.157895 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 74 ssCCCCGCSssk Reverse Complement Reverse Complement Forward 2 11 0.036087 Original Motif 0 0.444444 0.37037 0.185185 0.111111 0.407407 0.333333 0.148148 0 0.888889 0.037037 0.0740741 0 0.888889 0.0740741 0.037037 0 0.777778 0.222222 0 0 1 0 0 0 0 1 0 0.037037 0.888889 0 0.0740741 0 0.703704 0.296296 0 0 0.518519 0.37037 0.111111 0.111111 0.407407 0.259259 0.222222 0.0740741 0.222222 0.407407 0.296296 Reverse Complement Motif 0.0740741 0.407407 0.222222 0.296296 0.111111 0.259259 0.407407 0.222222 0 0.37037 0.518519 0.111111 0 0.296296 0.703704 0 0.037037 0 0.888889 0.0740741 0 1 0 0 0 0 1 0 0 0.222222 0.777778 0 0 0.0740741 0.888889 0.037037 0 0.037037 0.888889 0.0740741 0.111111 0.333333 0.407407 0.148148 0 0.37037 0.444444 0.185185 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 68 sscCCCGCGcs Original Motif Original Motif Forward 1 11 0.0375477 Original Motif 0.147059 0.441176 0.264706 0.147059 0.117647 0.529412 0.294118 0.0588235 0 0.676471 0.235294 0.0882353 0.0294118 0.852941 0.117647 0 0 0.823529 0.176471 0 0 0.794118 0.205882 0 0 0 1 0 0 1 0 0 0 0.0588235 0.941176 0 0.117647 0.470588 0.235294 0.176471 0 0.323529 0.529412 0.147059 Reverse Complement Motif 0 0.529412 0.323529 0.147059 0.117647 0.235294 0.470588 0.176471 0 0.941176 0.0588235 0 0 0 1 0 0 1 0 0 0 0.205882 0.794118 0 0 0.176471 0.823529 0 0.0294118 0.117647 0.852941 0 0 0.235294 0.676471 0.0882353 0.117647 0.294118 0.529412 0.0588235 0.147059 0.264706 0.441176 0.147059 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 79 cCGCGGrCACG Original Motif Original Motif Forward 1 11 0.0461039 Original Motif 0 0.6 0.2 0.2 0 0.8 0 0.2 0 0 1 0 0 1 0 0 0 0 1 0 0 0.2 0.8 0 0.6 0 0.4 0 0 0.8 0.2 0 0.8 0 0.2 0 0 0.8 0.2 0 0.2 0 0.8 0 Reverse Complement Motif 0.2 0.8 0 0 0 0.2 0.8 0 0 0 0.2 0.8 0 0.2 0.8 0 0 0 0.4 0.6 0 0.8 0.2 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0.8 0.2 0 0.2 0.6 0.2 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 21 Motif 21 Original Motif Original Motif Backward 2 11 0.0529221 Original Motif 0 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 0.5 0.5 0 0 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 0 0.5 0 0.5 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 66 CTCF Original Motif Original Motif Forward 8 11 0.0533963 Original Motif 0.0952903 0.318729 0.0832421 0.502738 0.182913 0.158817 0.45345 0.204819 0.307777 0.0536692 0.491785 0.146769 0.0613363 0.876232 0.0230011 0.0394304 0.00876232 0.989047 0 0.00219058 0.814896 0.0142388 0.0711939 0.0996714 0.0438116 0.578313 0.365827 0.0120482 0.117325 0.474781 0.0526316 0.355263 0.933114 0.0120614 0.0350877 0.0197368 0.00548847 0 0.991218 0.00329308 0.365532 0.00329308 0.621295 0.00987925 0.0592755 0.0131723 0.553238 0.374314 0.0131868 0 0.978022 0.00879121 0.0615385 0.00879121 0.851648 0.078022 0.114411 0.806381 0.00550055 0.0737074 0.409241 0.0143014 0.557756 0.0187019 0.0903084 0.530837 0.338106 0.0407489 0.128855 0.354626 0.0803965 0.436123 0.442731 0.199339 0.292952 0.064978 Reverse Complement Motif 0.064978 0.199339 0.292952 0.442731 0.436123 0.354626 0.0803965 0.128855 0.0903084 0.338106 0.530837 0.0407489 0.409241 0.557756 0.0143014 0.0187019 0.114411 0.00550055 0.806381 0.0737074 0.0615385 0.851648 0.00879121 0.078022 0.0131868 0.978022 0 0.00879121 0.0592755 0.553238 0.0131723 0.374314 0.365532 0.621295 0.00329308 0.00987925 0.00548847 0.991218 0 0.00329308 0.0197368 0.0120614 0.0350877 0.933114 0.117325 0.0526316 0.474781 0.355263 0.0438116 0.365827 0.578313 0.0120482 0.0996714 0.0142388 0.0711939 0.814896 0.00876232 0 0.989047 0.00219058 0.0613363 0.0230011 0.876232 0.0394304 0.307777 0.491785 0.0536692 0.146769 0.182913 0.45345 0.158817 0.204819 0.502738 0.318729 0.0832421 0.0952903 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 54 Esrrb Reverse Complement Original Motif Forward 2 11 0.0543224 Original Motif 0.290198 0.220264 0.2712 0.218337 0.184941 0.22781 0.376477 0.210772 0.115226 0.332236 0.331687 0.22085 0.0709589 0.342466 0.12274 0.463836 0.0848618 0.729264 0.17164 0.0142349 0.909737 0.00875274 0.0678337 0.0136761 0.975656 0.000547046 0.0164114 0.00738512 0.00875753 0.00136836 0.98139 0.00848385 0.00575027 0.00328587 0.986309 0.00465498 0.049904 0.0126131 0.0669043 0.870579 0.00247253 0.927473 0.0467033 0.0233516 0.951569 0.00550358 0.0354981 0.00742983 Reverse Complement Motif 0.00742983 0.00550358 0.0354981 0.951569 0.00247253 0.0467033 0.927473 0.0233516 0.870579 0.0126131 0.0669043 0.049904 0.00575027 0.986309 0.00328587 0.00465498 0.00875753 0.98139 0.00136836 0.00848385 0.00738512 0.000547046 0.0164114 0.975656 0.0136761 0.00875274 0.0678337 0.909737 0.0848618 0.17164 0.729264 0.0142349 0.463836 0.342466 0.12274 0.0709589 0.115226 0.331687 0.332236 0.22085 0.184941 0.376477 0.22781 0.210772 0.218337 0.220264 0.2712 0.290198 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 59 ESR2 Reverse Complement Original Motif Forward 6 11 0.0563598 Original Motif 0.218487 0.45098 0.176471 0.154062 0.442577 0.142857 0.114846 0.29972 0.521008 0.0420168 0.431373 0.00560224 0.0756303 0 0.770308 0.154062 0.0504202 0.0560224 0.893557 0 0.0364146 0.0532213 0.092437 0.817927 0 1 0 0 0.943978 0.00280112 0 0.0532213 0.137255 0.344538 0.316527 0.201681 0.179272 0.176471 0.417367 0.226891 0.145658 0.170868 0.411765 0.271709 0.0588235 0.092437 0.0672269 0.781513 0.176471 0.070028 0.742297 0.0112045 0.498599 0.277311 0.0532213 0.170868 0.0952381 0.7507 0.00560224 0.148459 0.128852 0.809524 0 0.0616246 0.0756303 0.252101 0 0.672269 0.168067 0.263305 0.380952 0.187675 Reverse Complement Motif 0.168067 0.380952 0.263305 0.187675 0.672269 0.252101 0 0.0756303 0.128852 0 0.809524 0.0616246 0.0952381 0.00560224 0.7507 0.148459 0.170868 0.277311 0.0532213 0.498599 0.176471 0.742297 0.070028 0.0112045 0.781513 0.092437 0.0672269 0.0588235 0.145658 0.411765 0.170868 0.271709 0.179272 0.417367 0.176471 0.226891 0.137255 0.316527 0.344538 0.201681 0.0532213 0.00280112 0 0.943978 0 0 1 0 0.817927 0.0532213 0.092437 0.0364146 0.0504202 0.893557 0.0560224 0 0.0756303 0.770308 0 0.154062 0.00560224 0.0420168 0.431373 0.521008 0.29972 0.142857 0.114846 0.442577 0.218487 0.176471 0.45098 0.154062 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 57 REST Reverse Complement Original Motif Forward 2 11 0.0593846 Original Motif 0.132621 0.109365 0.230044 0.52797 0.0363181 0.168441 0.0914214 0.70382 0.0475892 0.855354 0.0313087 0.0657483 0.906367 0.0187266 0.0586767 0.0162297 0.021197 0.0274314 0.945137 0.00623441 0.0760125 0.609346 0.201246 0.113396 0.980697 0.00435866 0.00747198 0.00747198 0.001868 0.987547 0.00747198 0.00311333 0.0217933 0.922167 0.0124533 0.0435866 0.568847 0.125234 0.100935 0.204984 0.136534 0.233791 0.0773067 0.552369 0.0243142 0.00436409 0.966958 0.00436409 0.0124688 0.00311721 0.983167 0.00124688 0.877105 0.069869 0.0212102 0.0318153 0.008125 0.8 0.145625 0.04625 0.98375 0.005625 0.004375 0.00625 0.0263488 0.00815558 0.959849 0.00564617 0.128688 0.632141 0.114878 0.124294 0.229899 0.0194724 0.432161 0.318467 0.133962 0.586792 0.200629 0.0786164 0.112579 0.700629 0.0232704 0.163522 Reverse Complement Motif 0.112579 0.0232704 0.700629 0.163522 0.133962 0.200629 0.586792 0.0786164 0.229899 0.432161 0.0194724 0.318467 0.128688 0.114878 0.632141 0.124294 0.0263488 0.959849 0.00815558 0.00564617 0.00625 0.005625 0.004375 0.98375 0.008125 0.145625 0.8 0.04625 0.0318153 0.069869 0.0212102 0.877105 0.0124688 0.983167 0.00311721 0.00124688 0.0243142 0.966958 0.00436409 0.00436409 0.552369 0.233791 0.0773067 0.136534 0.204984 0.125234 0.100935 0.568847 0.0217933 0.0124533 0.922167 0.0435866 0.001868 0.00747198 0.987547 0.00311333 0.00747198 0.00435866 0.00747198 0.980697 0.0760125 0.201246 0.609346 0.113396 0.021197 0.945137 0.0274314 0.00623441 0.0162297 0.0187266 0.0586767 0.906367 0.0475892 0.0313087 0.855354 0.0657483 0.70382 0.168441 0.0914214 0.0363181 0.52797 0.109365 0.230044 0.132621 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 64 PPARGRXRA Reverse Complement Original Motif Backward 3 11 0.0598714 Original Motif 0.109685 0.369895 0.373396 0.147025 0.117716 0.193473 0.148019 0.540793 0.453488 0.0267442 0.427907 0.0918605 0.116144 0.00348432 0.779326 0.101045 0.161253 0.0174014 0.781903 0.0394432 0.168213 0.149652 0.458237 0.223898 0.0822711 0.633835 0.207416 0.0764774 0.949015 0.0243337 0.0173812 0.00926999 0.604867 0.0556199 0.312862 0.0266512 0.825231 0.00578704 0.158565 0.0104167 0.0950174 0.0023175 0.88876 0.013905 0.0475087 0.0104287 0.803013 0.13905 0.0254925 0.114716 0.304751 0.555041 0.062645 0.643852 0.167053 0.12645 0.784223 0.0672854 0.0545244 0.0939675 Reverse Complement Motif 0.0939675 0.0672854 0.0545244 0.784223 0.062645 0.167053 0.643852 0.12645 0.555041 0.114716 0.304751 0.0254925 0.0475087 0.803013 0.0104287 0.13905 0.0950174 0.88876 0.0023175 0.013905 0.0104167 0.00578704 0.158565 0.825231 0.0266512 0.0556199 0.312862 0.604867 0.00926999 0.0243337 0.0173812 0.949015 0.0822711 0.207416 0.633835 0.0764774 0.168213 0.458237 0.149652 0.223898 0.161253 0.781903 0.0174014 0.0394432 0.116144 0.779326 0.00348432 0.101045 0.0918605 0.0267442 0.427907 0.453488 0.540793 0.193473 0.148019 0.117716 0.109685 0.373396 0.369895 0.147025 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # 4 Motif ID 79 Motif Name cCGCGGrCACG Original Motif 0 0.6 0.2 0.2 0 0.8 0 0.2 0 0 1 0 0 1 0 0 0 0 1 0 0 0.2 0.8 0 0.6 0 0.4 0 0 0.8 0.2 0 0.8 0 0.2 0 0 0.8 0.2 0 0.2 0 0.8 0 Reverse Complement Motif 0.2 0.8 0 0 0 0.2 0.8 0 0 0 0.2 0.8 0 0.2 0.8 0 0 0 0.4 0.6 0 0.8 0.2 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0.8 0.2 0 0.2 0.6 0.2 ******************************************************************* Best Matches for Significant Motif ID 79 (Highest to Lowest) ******************************************************************* Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 82 gCGCGCsCgsG Original Motif Original Motif Forward 1 11 0.010473 Original Motif 0.105263 0.210526 0.526316 0.157895 0 0.736842 0.105263 0.157895 0 0 1 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0.368421 0.631579 0 0 0.894737 0.105263 0 0.157895 0.157895 0.631579 0.0526316 0.0526316 0.631579 0.263158 0.0526316 0.105263 0.0526316 0.789474 0.0526316 Reverse Complement Motif 0.105263 0.789474 0.0526316 0.0526316 0.0526316 0.263158 0.631579 0.0526316 0.157895 0.631579 0.157895 0.0526316 0 0.105263 0.894737 0 0 0.631579 0.368421 0 0 0 1 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0.105263 0.736842 0.157895 0.105263 0.526316 0.210526 0.157895 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 88 TFF11 Reverse Complement Reverse Complement Backward 1 11 0.0478408 Original Motif 0.0985915 0.556338 0.246479 0.0985915 0.28169 0.00704225 0.0985915 0.612676 0.00704225 0.0211268 0.971831 0 0.00704225 0.971831 0.00704225 0.0140845 0.00704225 0 0 0.992958 0 0 1 0 0.176056 0.415493 0.232394 0.176056 0.267606 0.197183 0.267606 0.267606 0.119718 0.190141 0.401408 0.288732 0.0985915 0.43662 0.211268 0.253521 0.239437 0.15493 0.183099 0.422535 0.126761 0.140845 0.619718 0.112676 0.190141 0.28169 0.225352 0.302817 0.232394 0.176056 0.373239 0.21831 Reverse Complement Motif 0.232394 0.373239 0.176056 0.21831 0.302817 0.28169 0.225352 0.190141 0.126761 0.619718 0.140845 0.112676 0.422535 0.15493 0.183099 0.239437 0.0985915 0.211268 0.43662 0.253521 0.119718 0.401408 0.190141 0.288732 0.267606 0.197183 0.267606 0.267606 0.176056 0.232394 0.415493 0.176056 0 1 0 0 0.992958 0 0 0.00704225 0.00704225 0.00704225 0.971831 0.0140845 0.00704225 0.971831 0.0211268 0 0.612676 0.00704225 0.0985915 0.28169 0.0985915 0.246479 0.556338 0.0985915 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 57 REST Original Motif Original Motif Backward 4 11 0.0484441 Original Motif 0.132621 0.109365 0.230044 0.52797 0.0363181 0.168441 0.0914214 0.70382 0.0475892 0.855354 0.0313087 0.0657483 0.906367 0.0187266 0.0586767 0.0162297 0.021197 0.0274314 0.945137 0.00623441 0.0760125 0.609346 0.201246 0.113396 0.980697 0.00435866 0.00747198 0.00747198 0.001868 0.987547 0.00747198 0.00311333 0.0217933 0.922167 0.0124533 0.0435866 0.568847 0.125234 0.100935 0.204984 0.136534 0.233791 0.0773067 0.552369 0.0243142 0.00436409 0.966958 0.00436409 0.0124688 0.00311721 0.983167 0.00124688 0.877105 0.069869 0.0212102 0.0318153 0.008125 0.8 0.145625 0.04625 0.98375 0.005625 0.004375 0.00625 0.0263488 0.00815558 0.959849 0.00564617 0.128688 0.632141 0.114878 0.124294 0.229899 0.0194724 0.432161 0.318467 0.133962 0.586792 0.200629 0.0786164 0.112579 0.700629 0.0232704 0.163522 Reverse Complement Motif 0.112579 0.0232704 0.700629 0.163522 0.133962 0.200629 0.586792 0.0786164 0.229899 0.432161 0.0194724 0.318467 0.128688 0.114878 0.632141 0.124294 0.0263488 0.959849 0.00815558 0.00564617 0.00625 0.005625 0.004375 0.98375 0.008125 0.145625 0.8 0.04625 0.0318153 0.069869 0.0212102 0.877105 0.0124688 0.983167 0.00311721 0.00124688 0.0243142 0.966958 0.00436409 0.00436409 0.552369 0.233791 0.0773067 0.136534 0.204984 0.125234 0.100935 0.568847 0.0217933 0.0124533 0.922167 0.0435866 0.001868 0.00747198 0.987547 0.00311333 0.00747198 0.00435866 0.00747198 0.980697 0.0760125 0.201246 0.609346 0.113396 0.021197 0.945137 0.0274314 0.00623441 0.0162297 0.0187266 0.0586767 0.906367 0.0475892 0.0313087 0.855354 0.0657483 0.70382 0.168441 0.0914214 0.0363181 0.52797 0.109365 0.230044 0.132621 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 53 ESR1 Reverse Complement Reverse Complement Forward 8 11 0.0486581 Original Motif 0.261242 0.256959 0.329764 0.152034 0.228632 0.17094 0.350427 0.25 0.136752 0.369658 0.318376 0.175214 0.176596 0.487234 0.138298 0.197872 0.285106 0.493617 0.1 0.121277 0.651163 0.0591966 0.188161 0.10148 0.0759494 0.0168776 0.816456 0.0907173 0.04 0.0378947 0.884211 0.0378947 0.0694737 0.0863158 0.191579 0.652632 0.00842105 0.829474 0.111579 0.0505263 0.837895 0.0273684 0.0568421 0.0778947 0.122105 0.526316 0.225263 0.126316 0.132632 0.581053 0.111579 0.174737 0.134737 0.543158 0.204211 0.117895 0.0673684 0.04 0.0168421 0.875789 0.0442105 0.0463158 0.896842 0.0126316 0.642105 0.223158 0.0652632 0.0694737 0.0210526 0.917895 0.0252632 0.0357895 0.124211 0.743158 0.00421053 0.128421 0.0547368 0.347368 0.0463158 0.551579 Reverse Complement Motif 0.551579 0.347368 0.0463158 0.0547368 0.124211 0.00421053 0.743158 0.128421 0.0210526 0.0252632 0.917895 0.0357895 0.0694737 0.223158 0.0652632 0.642105 0.0442105 0.896842 0.0463158 0.0126316 0.875789 0.04 0.0168421 0.0673684 0.134737 0.204211 0.543158 0.117895 0.132632 0.111579 0.581053 0.174737 0.122105 0.225263 0.526316 0.126316 0.0778947 0.0273684 0.0568421 0.837895 0.00842105 0.111579 0.829474 0.0505263 0.652632 0.0863158 0.191579 0.0694737 0.04 0.884211 0.0378947 0.0378947 0.0759494 0.816456 0.0168776 0.0907173 0.10148 0.0591966 0.188161 0.651163 0.285106 0.1 0.493617 0.121277 0.176596 0.138298 0.487234 0.197872 0.136752 0.318376 0.369658 0.175214 0.228632 0.350427 0.17094 0.25 0.261242 0.329764 0.256959 0.152034 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 78 ssGCkTGCssk Original Motif Original Motif Backward 1 11 0.0503056 Original Motif 0 0.5 0.5 0 0 0.5 0.5 0 0 0 1 0 0 1 0 0 0 0 0.5 0.5 0 0 0 1 0 0 1 0 0 1 0 0 0 0.5 0.5 0 0 0.5 0.5 0 0 0 0.5 0.5 Reverse Complement Motif 0 0.5 0 0.5 0 0.5 0.5 0 0 0.5 0.5 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0.5 0 0.5 0 0 1 0 0 1 0 0 0 0.5 0.5 0 0 0.5 0.5 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 74 ssCCCCGCSssk Reverse Complement Reverse Complement Forward 1 11 0.055777 Original Motif 0 0.444444 0.37037 0.185185 0.111111 0.407407 0.333333 0.148148 0 0.888889 0.037037 0.0740741 0 0.888889 0.0740741 0.037037 0 0.777778 0.222222 0 0 1 0 0 0 0 1 0 0.037037 0.888889 0 0.0740741 0 0.703704 0.296296 0 0 0.518519 0.37037 0.111111 0.111111 0.407407 0.259259 0.222222 0.0740741 0.222222 0.407407 0.296296 Reverse Complement Motif 0.0740741 0.407407 0.222222 0.296296 0.111111 0.259259 0.407407 0.222222 0 0.37037 0.518519 0.111111 0 0.296296 0.703704 0 0.037037 0 0.888889 0.0740741 0 1 0 0 0 0 1 0 0 0.222222 0.777778 0 0 0.0740741 0.888889 0.037037 0 0.037037 0.888889 0.0740741 0.111111 0.333333 0.407407 0.148148 0 0.37037 0.444444 0.185185 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 66 CTCF Original Motif Original Motif Backward 2 11 0.0588663 Original Motif 0.0952903 0.318729 0.0832421 0.502738 0.182913 0.158817 0.45345 0.204819 0.307777 0.0536692 0.491785 0.146769 0.0613363 0.876232 0.0230011 0.0394304 0.00876232 0.989047 0 0.00219058 0.814896 0.0142388 0.0711939 0.0996714 0.0438116 0.578313 0.365827 0.0120482 0.117325 0.474781 0.0526316 0.355263 0.933114 0.0120614 0.0350877 0.0197368 0.00548847 0 0.991218 0.00329308 0.365532 0.00329308 0.621295 0.00987925 0.0592755 0.0131723 0.553238 0.374314 0.0131868 0 0.978022 0.00879121 0.0615385 0.00879121 0.851648 0.078022 0.114411 0.806381 0.00550055 0.0737074 0.409241 0.0143014 0.557756 0.0187019 0.0903084 0.530837 0.338106 0.0407489 0.128855 0.354626 0.0803965 0.436123 0.442731 0.199339 0.292952 0.064978 Reverse Complement Motif 0.064978 0.199339 0.292952 0.442731 0.436123 0.354626 0.0803965 0.128855 0.0903084 0.338106 0.530837 0.0407489 0.409241 0.557756 0.0143014 0.0187019 0.114411 0.00550055 0.806381 0.0737074 0.0615385 0.851648 0.00879121 0.078022 0.0131868 0.978022 0 0.00879121 0.0592755 0.553238 0.0131723 0.374314 0.365532 0.621295 0.00329308 0.00987925 0.00548847 0.991218 0 0.00329308 0.0197368 0.0120614 0.0350877 0.933114 0.117325 0.0526316 0.474781 0.355263 0.0438116 0.365827 0.578313 0.0120482 0.0996714 0.0142388 0.0711939 0.814896 0.00876232 0 0.989047 0.00219058 0.0613363 0.0230011 0.876232 0.0394304 0.307777 0.491785 0.0536692 0.146769 0.182913 0.45345 0.158817 0.204819 0.502738 0.318729 0.0832421 0.0952903 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 3 Motif 3 Original Motif Original Motif Forward 2 11 0.0597806 Original Motif 0.239437 0.274648 0.0774649 0.408451 0.084507 0.65493 0.147887 0.112676 0.753521 0 0 0.246479 0.309859 0 0.65493 0.035211 0.302817 0.049296 0.584507 0.06338 0.542254 0.007042 0.394366 0.056338 0.457746 0.253521 0.190141 0.098592 0.584507 0.169014 0.232394 0.014085 0.274648 0.62676 0.0985919 0 0.852112 0 0.021127 0.126761 0 0.570423 0.429577 0 0.760563 0 0 0.239437 0.204225 0.021127 0.774648 0 Reverse Complement Motif 0.204225 0.774648 0.021127 0 0.239437 0 0 0.760563 0 0.429577 0.570423 0 0.126761 0 0.021127 0.852112 0.274648 0.0985919 0.62676 0 0.014085 0.169014 0.232394 0.584507 0.098592 0.253521 0.190141 0.457746 0.056338 0.007042 0.394366 0.542254 0.302817 0.584507 0.049296 0.06338 0.309859 0.65493 0 0.035211 0.246479 0 0 0.753521 0.084507 0.147887 0.65493 0.112676 0.408451 0.274648 0.0774649 0.239437 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 2 Motif 2 Reverse Complement Reverse Complement Backward 3 11 0.0624268 Original Motif 0.833333 0 0.166667 0 0 1 0 0 0.875 0 0 0.125 0.083333 0.875 0.041667 0 0.958333 0 0 0.041667 0.125 0.875 0 0 0.833333 0.166667 0 0 0 0.75 0 0.25 0.666667 0 0.208333 0.125 0 0.833333 0.041667 0.125 0.791667 0.125 0.083333 0 0 1 0 0 0.708334 0 0.0833331 0.208333 0 0.958333 0 0.041667 Reverse Complement Motif 0 0 0.958333 0.041667 0.208333 0 0.0833331 0.708334 0 0 1 0 0 0.125 0.083333 0.791667 0 0.041667 0.833333 0.125 0.125 0 0.208333 0.666667 0 0 0.75 0.25 0 0.166667 0 0.833333 0.125 0 0.875 0 0.041667 0 0 0.958333 0.083333 0.041667 0.875 0 0.125 0 0 0.875 0 0 1 0 0 0 0.166667 0.833333 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 93 TFM12 Original Motif Original Motif Forward 6 11 0.0625015 Original Motif 0.380282 0.211268 0.373239 0.0352113 0.746479 0.0422535 0.119718 0.0915493 0.28169 0.0492958 0.56338 0.105634 0.21831 0 0.443662 0.338028 0.161972 0.126761 0.598592 0.112676 0.267606 0.528169 0.176056 0.028169 0.640845 0.028169 0.0915493 0.239437 0.0633803 0.084507 0.809859 0.0422535 0.366197 0.246479 0.211268 0.176056 0.471831 0.140845 0.309859 0.0774648 0.373239 0 0.542254 0.084507 0.211268 0.105634 0.605634 0.0774648 0.197183 0.302817 0.478873 0.0211268 0.408451 0.140845 0.387324 0.0633803 0.0985915 0.704225 0.197183 0 0.683099 0.028169 0.0704225 0.21831 0.140845 0.373239 0.485915 0 0.788732 0 0.0633803 0.147887 0 0.169014 0.816901 0.0140845 0.274648 0.295775 0.239437 0.190141 Reverse Complement Motif 0.274648 0.239437 0.295775 0.190141 0 0.816901 0.169014 0.0140845 0.147887 0 0.0633803 0.788732 0.140845 0.485915 0.373239 0 0.21831 0.028169 0.0704225 0.683099 0.0985915 0.197183 0.704225 0 0.0633803 0.140845 0.387324 0.408451 0.197183 0.478873 0.302817 0.0211268 0.211268 0.605634 0.105634 0.0774648 0.373239 0.542254 0 0.084507 0.0774648 0.140845 0.309859 0.471831 0.176056 0.246479 0.211268 0.366197 0.0633803 0.809859 0.084507 0.0422535 0.239437 0.028169 0.0915493 0.640845 0.267606 0.176056 0.528169 0.028169 0.161972 0.598592 0.126761 0.112676 0.21831 0.443662 0 0.338028 0.28169 0.56338 0.0492958 0.105634 0.0915493 0.0422535 0.119718 0.746479 0.0352113 0.211268 0.373239 0.380282 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- **************************************************************************************************************************************************************************************************** ********************************************************************** Best Matches for Each Motif (Highest to Lowest) ***************************************************************************** Dataset # 1 Motif ID 1 Motif Name Motif 1 Original Motif 0 0.598592 0.176056 0.225352 0 0.626761 0 0.373239 0 0 0 1 0 0.408451 0.514084 0.0774649 0.091549 0.823944 0.028169 0.056338 0.133803 0.690141 0 0.176056 0.042254 0.28169 0 0.676056 0.007042 0.683099 0.197183 0.112676 0.197183 0 0 0.802817 0 0.084507 0.690141 0.225352 0.091549 0.605634 0.169014 0.133803 Reserve Complement Motif 0.091549 0.169014 0.605634 0.133803 0 0.690141 0.084507 0.225352 0.802817 0 0 0.197183 0.007042 0.197183 0.683099 0.112676 0.676056 0.28169 0 0.042254 0.133803 0 0.690141 0.176056 0.091549 0.028169 0.823944 0.056338 0 0.514084 0.408451 0.0774649 1 0 0 0 0 0 0.626761 0.373239 0 0.176056 0.598592 0.225352 ************************************************************************ Best Matches for Motif ID 1 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 90 TFM2 Original Motif Original Motif Forward 8 11 0 Original Motif 0.105634 0.514085 0.15493 0.225352 0.239437 0.408451 0.0985915 0.253521 0.302817 0.239437 0.0422535 0.415493 0.147887 0.598592 0.169014 0.084507 0.316901 0.422535 0.0211268 0.239437 0.0492958 0.380282 0.21831 0.352113 0.183099 0.133803 0.0915493 0.591549 0 0.598592 0.246479 0.15493 0.0704225 0.753521 0 0.176056 0.232394 0 0.0633803 0.704225 0 0.394366 0.556338 0.0492958 0.0352113 0.901408 0 0.0633803 0.056338 0.591549 0 0.352113 0.119718 0.246479 0.028169 0.605634 0.028169 0.626761 0.253521 0.0915493 0.211268 0 0.0774648 0.711268 0.0633803 0.190141 0.65493 0.0915493 0.126761 0.584507 0 0.288732 Reverse Complement Motif 0.126761 0 0.584507 0.288732 0.0633803 0.65493 0.190141 0.0915493 0.711268 0 0.0774648 0.211268 0.028169 0.253521 0.626761 0.0915493 0.605634 0.246479 0.028169 0.119718 0.056338 0 0.591549 0.352113 0.0352113 0 0.901408 0.0633803 0 0.556338 0.394366 0.0492958 0.704225 0 0.0633803 0.232394 0.0704225 0 0.753521 0.176056 0 0.246479 0.598592 0.15493 0.591549 0.133803 0.0915493 0.183099 0.0492958 0.21831 0.380282 0.352113 0.316901 0.0211268 0.422535 0.239437 0.147887 0.169014 0.598592 0.084507 0.415493 0.239437 0.0422535 0.302817 0.239437 0.0985915 0.408451 0.253521 0.105634 0.15493 0.514085 0.225352 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 2 48 Motif 48 Original Motif Reverse Complement Backward 1 11 0.0204179 Original Motif 0.02381 0 0.97619 0 0.238095 0.714286 0 0.047619 0.95238 0.02381 0 0.02381 0.380952 0.142857 0.452381 0.02381 0.52381 0.190476 0.285714 0 0.095238 0.047619 0.619048 0.238095 0 0.02381 0.904761 0.0714289 0 0.571429 0.428571 0 0.97619 0.02381 0 0 0.333333 0 0.666667 0 0 0.428571 0.571429 0 Reverse Complement Motif 0 0.571429 0.428571 0 0.333333 0.666667 0 0 0 0.02381 0 0.97619 0 0.428571 0.571429 0 0 0.904761 0.02381 0.0714289 0.095238 0.619048 0.047619 0.238095 0 0.190476 0.285714 0.52381 0.380952 0.452381 0.142857 0.02381 0.02381 0.02381 0 0.95238 0.238095 0 0.714286 0.047619 0.02381 0.97619 0 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 88 TFF11 Original Motif Original Motif Forward 3 11 0.0606594 Original Motif 0.0985915 0.556338 0.246479 0.0985915 0.28169 0.00704225 0.0985915 0.612676 0.00704225 0.0211268 0.971831 0 0.00704225 0.971831 0.00704225 0.0140845 0.00704225 0 0 0.992958 0 0 1 0 0.176056 0.415493 0.232394 0.176056 0.267606 0.197183 0.267606 0.267606 0.119718 0.190141 0.401408 0.288732 0.0985915 0.43662 0.211268 0.253521 0.239437 0.15493 0.183099 0.422535 0.126761 0.140845 0.619718 0.112676 0.190141 0.28169 0.225352 0.302817 0.232394 0.176056 0.373239 0.21831 Reverse Complement Motif 0.232394 0.373239 0.176056 0.21831 0.302817 0.28169 0.225352 0.190141 0.126761 0.619718 0.140845 0.112676 0.422535 0.15493 0.183099 0.239437 0.0985915 0.211268 0.43662 0.253521 0.119718 0.401408 0.190141 0.288732 0.267606 0.197183 0.267606 0.267606 0.176056 0.232394 0.415493 0.176056 0 1 0 0 0.992958 0 0 0.00704225 0.00704225 0.00704225 0.971831 0.0140845 0.00704225 0.971831 0.0211268 0 0.612676 0.00704225 0.0985915 0.28169 0.0985915 0.246479 0.556338 0.0985915 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 93 TFM12 Reverse Complement Original Motif Forward 5 11 0.0635403 Original Motif 0.380282 0.211268 0.373239 0.0352113 0.746479 0.0422535 0.119718 0.0915493 0.28169 0.0492958 0.56338 0.105634 0.21831 0 0.443662 0.338028 0.161972 0.126761 0.598592 0.112676 0.267606 0.528169 0.176056 0.028169 0.640845 0.028169 0.0915493 0.239437 0.0633803 0.084507 0.809859 0.0422535 0.366197 0.246479 0.211268 0.176056 0.471831 0.140845 0.309859 0.0774648 0.373239 0 0.542254 0.084507 0.211268 0.105634 0.605634 0.0774648 0.197183 0.302817 0.478873 0.0211268 0.408451 0.140845 0.387324 0.0633803 0.0985915 0.704225 0.197183 0 0.683099 0.028169 0.0704225 0.21831 0.140845 0.373239 0.485915 0 0.788732 0 0.0633803 0.147887 0 0.169014 0.816901 0.0140845 0.274648 0.295775 0.239437 0.190141 Reverse Complement Motif 0.274648 0.239437 0.295775 0.190141 0 0.816901 0.169014 0.0140845 0.147887 0 0.0633803 0.788732 0.140845 0.485915 0.373239 0 0.21831 0.028169 0.0704225 0.683099 0.0985915 0.197183 0.704225 0 0.0633803 0.140845 0.387324 0.408451 0.197183 0.478873 0.302817 0.0211268 0.211268 0.605634 0.105634 0.0774648 0.373239 0.542254 0 0.084507 0.0774648 0.140845 0.309859 0.471831 0.176056 0.246479 0.211268 0.366197 0.0633803 0.809859 0.084507 0.0422535 0.239437 0.028169 0.0915493 0.640845 0.267606 0.176056 0.528169 0.028169 0.161972 0.598592 0.126761 0.112676 0.21831 0.443662 0 0.338028 0.28169 0.56338 0.0492958 0.105634 0.0915493 0.0422535 0.119718 0.746479 0.0352113 0.211268 0.373239 0.380282 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 66 CTCF Reverse Complement Original Motif Backward 3 11 0.0656459 Original Motif 0.0952903 0.318729 0.0832421 0.502738 0.182913 0.158817 0.45345 0.204819 0.307777 0.0536692 0.491785 0.146769 0.0613363 0.876232 0.0230011 0.0394304 0.00876232 0.989047 0 0.00219058 0.814896 0.0142388 0.0711939 0.0996714 0.0438116 0.578313 0.365827 0.0120482 0.117325 0.474781 0.0526316 0.355263 0.933114 0.0120614 0.0350877 0.0197368 0.00548847 0 0.991218 0.00329308 0.365532 0.00329308 0.621295 0.00987925 0.0592755 0.0131723 0.553238 0.374314 0.0131868 0 0.978022 0.00879121 0.0615385 0.00879121 0.851648 0.078022 0.114411 0.806381 0.00550055 0.0737074 0.409241 0.0143014 0.557756 0.0187019 0.0903084 0.530837 0.338106 0.0407489 0.128855 0.354626 0.0803965 0.436123 0.442731 0.199339 0.292952 0.064978 Reverse Complement Motif 0.064978 0.199339 0.292952 0.442731 0.436123 0.354626 0.0803965 0.128855 0.0903084 0.338106 0.530837 0.0407489 0.409241 0.557756 0.0143014 0.0187019 0.114411 0.00550055 0.806381 0.0737074 0.0615385 0.851648 0.00879121 0.078022 0.0131868 0.978022 0 0.00879121 0.0592755 0.553238 0.0131723 0.374314 0.365532 0.621295 0.00329308 0.00987925 0.00548847 0.991218 0 0.00329308 0.0197368 0.0120614 0.0350877 0.933114 0.117325 0.0526316 0.474781 0.355263 0.0438116 0.365827 0.578313 0.0120482 0.0996714 0.0142388 0.0711939 0.814896 0.00876232 0 0.989047 0.00219058 0.0613363 0.0230011 0.876232 0.0394304 0.307777 0.491785 0.0536692 0.146769 0.182913 0.45345 0.158817 0.204819 0.502738 0.318729 0.0832421 0.0952903 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 57 REST Original Motif Reverse Complement Backward 8 11 0.0782887 Original Motif 0.132621 0.109365 0.230044 0.52797 0.0363181 0.168441 0.0914214 0.70382 0.0475892 0.855354 0.0313087 0.0657483 0.906367 0.0187266 0.0586767 0.0162297 0.021197 0.0274314 0.945137 0.00623441 0.0760125 0.609346 0.201246 0.113396 0.980697 0.00435866 0.00747198 0.00747198 0.001868 0.987547 0.00747198 0.00311333 0.0217933 0.922167 0.0124533 0.0435866 0.568847 0.125234 0.100935 0.204984 0.136534 0.233791 0.0773067 0.552369 0.0243142 0.00436409 0.966958 0.00436409 0.0124688 0.00311721 0.983167 0.00124688 0.877105 0.069869 0.0212102 0.0318153 0.008125 0.8 0.145625 0.04625 0.98375 0.005625 0.004375 0.00625 0.0263488 0.00815558 0.959849 0.00564617 0.128688 0.632141 0.114878 0.124294 0.229899 0.0194724 0.432161 0.318467 0.133962 0.586792 0.200629 0.0786164 0.112579 0.700629 0.0232704 0.163522 Reverse Complement Motif 0.112579 0.0232704 0.700629 0.163522 0.133962 0.200629 0.586792 0.0786164 0.229899 0.432161 0.0194724 0.318467 0.128688 0.114878 0.632141 0.124294 0.0263488 0.959849 0.00815558 0.00564617 0.00625 0.005625 0.004375 0.98375 0.008125 0.145625 0.8 0.04625 0.0318153 0.069869 0.0212102 0.877105 0.0124688 0.983167 0.00311721 0.00124688 0.0243142 0.966958 0.00436409 0.00436409 0.552369 0.233791 0.0773067 0.136534 0.204984 0.125234 0.100935 0.568847 0.0217933 0.0124533 0.922167 0.0435866 0.001868 0.00747198 0.987547 0.00311333 0.00747198 0.00435866 0.00747198 0.980697 0.0760125 0.201246 0.609346 0.113396 0.021197 0.945137 0.0274314 0.00623441 0.0162297 0.0187266 0.0586767 0.906367 0.0475892 0.0313087 0.855354 0.0657483 0.70382 0.168441 0.0914214 0.0363181 0.52797 0.109365 0.230044 0.132621 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 53 ESR1 Original Motif Reverse Complement Backward 2 11 0.0788385 Original Motif 0.261242 0.256959 0.329764 0.152034 0.228632 0.17094 0.350427 0.25 0.136752 0.369658 0.318376 0.175214 0.176596 0.487234 0.138298 0.197872 0.285106 0.493617 0.1 0.121277 0.651163 0.0591966 0.188161 0.10148 0.0759494 0.0168776 0.816456 0.0907173 0.04 0.0378947 0.884211 0.0378947 0.0694737 0.0863158 0.191579 0.652632 0.00842105 0.829474 0.111579 0.0505263 0.837895 0.0273684 0.0568421 0.0778947 0.122105 0.526316 0.225263 0.126316 0.132632 0.581053 0.111579 0.174737 0.134737 0.543158 0.204211 0.117895 0.0673684 0.04 0.0168421 0.875789 0.0442105 0.0463158 0.896842 0.0126316 0.642105 0.223158 0.0652632 0.0694737 0.0210526 0.917895 0.0252632 0.0357895 0.124211 0.743158 0.00421053 0.128421 0.0547368 0.347368 0.0463158 0.551579 Reverse Complement Motif 0.551579 0.347368 0.0463158 0.0547368 0.124211 0.00421053 0.743158 0.128421 0.0210526 0.0252632 0.917895 0.0357895 0.0694737 0.223158 0.0652632 0.642105 0.0442105 0.896842 0.0463158 0.0126316 0.875789 0.04 0.0168421 0.0673684 0.134737 0.204211 0.543158 0.117895 0.132632 0.111579 0.581053 0.174737 0.122105 0.225263 0.526316 0.126316 0.0778947 0.0273684 0.0568421 0.837895 0.00842105 0.111579 0.829474 0.0505263 0.652632 0.0863158 0.191579 0.0694737 0.04 0.884211 0.0378947 0.0378947 0.0759494 0.816456 0.0168776 0.0907173 0.10148 0.0591966 0.188161 0.651163 0.285106 0.1 0.493617 0.121277 0.176596 0.138298 0.487234 0.197872 0.136752 0.318376 0.369658 0.175214 0.228632 0.350427 0.17094 0.25 0.261242 0.329764 0.256959 0.152034 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 64 PPARGRXRA Original Motif Reverse Complement Forward 4 11 0.0823596 Original Motif 0.109685 0.369895 0.373396 0.147025 0.117716 0.193473 0.148019 0.540793 0.453488 0.0267442 0.427907 0.0918605 0.116144 0.00348432 0.779326 0.101045 0.161253 0.0174014 0.781903 0.0394432 0.168213 0.149652 0.458237 0.223898 0.0822711 0.633835 0.207416 0.0764774 0.949015 0.0243337 0.0173812 0.00926999 0.604867 0.0556199 0.312862 0.0266512 0.825231 0.00578704 0.158565 0.0104167 0.0950174 0.0023175 0.88876 0.013905 0.0475087 0.0104287 0.803013 0.13905 0.0254925 0.114716 0.304751 0.555041 0.062645 0.643852 0.167053 0.12645 0.784223 0.0672854 0.0545244 0.0939675 Reverse Complement Motif 0.0939675 0.0672854 0.0545244 0.784223 0.062645 0.167053 0.643852 0.12645 0.555041 0.114716 0.304751 0.0254925 0.0475087 0.803013 0.0104287 0.13905 0.0950174 0.88876 0.0023175 0.013905 0.0104167 0.00578704 0.158565 0.825231 0.0266512 0.0556199 0.312862 0.604867 0.00926999 0.0243337 0.0173812 0.949015 0.0822711 0.207416 0.633835 0.0764774 0.168213 0.458237 0.149652 0.223898 0.161253 0.781903 0.0174014 0.0394432 0.116144 0.779326 0.00348432 0.101045 0.0918605 0.0267442 0.427907 0.453488 0.540793 0.193473 0.148019 0.117716 0.109685 0.373396 0.369895 0.147025 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 65 Tcfcp2l1 Original Motif Original Motif Forward 1 11 0.0826758 Original Motif 0.00196754 0.92548 0.0627152 0.00983768 0.069973 0.807513 0.00540142 0.117113 0.594508 0.00514832 0.275803 0.12454 0.0058838 0.0237803 0.967149 0.00318706 0.175477 0.33627 0.0256975 0.462555 0.0983847 0.28928 0.0621635 0.550171 0.173924 0.39726 0.151174 0.277642 0.357213 0.224939 0.252323 0.165526 0.63154 0.0696822 0.190954 0.107824 0.394421 0.0513824 0.310497 0.2437 0.00366928 0.933219 0.0547945 0.00831703 0.0617193 0.812148 0.00293902 0.123194 0.536555 0.00736016 0.305937 0.150147 0.0120393 0.0289926 0.954791 0.0041769 Reverse Complement Motif 0.0120393 0.954791 0.0289926 0.0041769 0.150147 0.00736016 0.305937 0.536555 0.0617193 0.00293902 0.812148 0.123194 0.00366928 0.0547945 0.933219 0.00831703 0.2437 0.0513824 0.310497 0.394421 0.107824 0.0696822 0.190954 0.63154 0.165526 0.224939 0.252323 0.357213 0.173924 0.151174 0.39726 0.277642 0.550171 0.28928 0.0621635 0.0983847 0.462555 0.33627 0.0256975 0.175477 0.0058838 0.967149 0.0237803 0.00318706 0.12454 0.00514832 0.275803 0.594508 0.069973 0.00540142 0.807513 0.117113 0.00196754 0.0627152 0.92548 0.00983768 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 2 47 Motif 47 Original Motif Original Motif Forward 3 11 0.0840726 Original Motif 0 0.5 0 0.5 0 0 1 0 0 1 0 0 0 1 0 0 0.714286 0.285714 0 0 0 0.857143 0 0.142857 0 1 0 0 0 0.142857 0.142857 0.714286 0.357143 0 0.357143 0.285714 0 0.428571 0.571429 0 0.142857 0.071429 0 0.785714 0 0 1 0 0.071429 0 0.785714 0.142857 0.142857 0.428571 0 0.428571 Reverse Complement Motif 0.142857 0 0.428571 0.428571 0.071429 0.785714 0 0.142857 0 1 0 0 0.785714 0.071429 0 0.142857 0 0.571429 0.428571 0 0.285714 0 0.357143 0.357143 0.714286 0.142857 0.142857 0 0 0 1 0 0 0 0.857143 0.142857 0 0.285714 0 0.714286 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0.5 0.5 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 74 ssCCCCGCSssk Reverse Complement Reverse Complement Backward 1 11 0.0843055 Original Motif 0 0.444444 0.37037 0.185185 0.111111 0.407407 0.333333 0.148148 0 0.888889 0.037037 0.0740741 0 0.888889 0.0740741 0.037037 0 0.777778 0.222222 0 0 1 0 0 0 0 1 0 0.037037 0.888889 0 0.0740741 0 0.703704 0.296296 0 0 0.518519 0.37037 0.111111 0.111111 0.407407 0.259259 0.222222 0.0740741 0.222222 0.407407 0.296296 Reverse Complement Motif 0.0740741 0.407407 0.222222 0.296296 0.111111 0.259259 0.407407 0.222222 0 0.37037 0.518519 0.111111 0 0.296296 0.703704 0 0.037037 0 0.888889 0.0740741 0 1 0 0 0 0 1 0 0 0.222222 0.777778 0 0 0.0740741 0.888889 0.037037 0 0.037037 0.888889 0.0740741 0.111111 0.333333 0.407407 0.148148 0 0.37037 0.444444 0.185185 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # 1 Motif ID 2 Motif Name Motif 2 Original Motif 0.833333 0 0.166667 0 0 1 0 0 0.875 0 0 0.125 0.083333 0.875 0.041667 0 0.958333 0 0 0.041667 0.125 0.875 0 0 0.833333 0.166667 0 0 0 0.75 0 0.25 0.666667 0 0.208333 0.125 0 0.833333 0.041667 0.125 0.791667 0.125 0.083333 0 0 1 0 0 0.708334 0 0.0833331 0.208333 0 0.958333 0 0.041667 Reserve Complement Motif 0 0 0.958333 0.041667 0.208333 0 0.0833331 0.708334 0 0 1 0 0 0.125 0.083333 0.791667 0 0.041667 0.833333 0.125 0.125 0 0.208333 0.666667 0 0 0.75 0.25 0 0.166667 0 0.833333 0.125 0 0.875 0 0.041667 0 0 0.958333 0.083333 0.041667 0.875 0 0.125 0 0 0.875 0 0 1 0 0 0 0.166667 0.833333 ************************************************************************ Best Matches for Motif ID 2 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 89 TFM1 Original Motif Original Motif Backward 2 14 0 Original Motif 0.107143 0.642857 0 0.25 0.785714 0.0357143 0.0714286 0.107143 0.25 0.714286 0.0357143 0 1 0 0 0 0 0.892857 0.107143 0 0.821429 0.142857 0 0.0357143 0.107143 0.785714 0.0714286 0.0357143 0.857143 0 0 0.142857 0 0.928571 0.0357143 0.0357143 0.785714 0 0.0714286 0.142857 0.142857 0.571429 0 0.285714 0.5 0 0.214286 0.285714 0 0.821429 0.178571 0 0.75 0.178571 0 0.0714286 0.0357143 0.821429 0 0.142857 0.857143 0.0357143 0.107143 0 0.178571 0.642857 0.178571 0 0.964286 0 0.0357143 0 Reverse Complement Motif 0 0 0.0357143 0.964286 0.178571 0.178571 0.642857 0 0 0.0357143 0.107143 0.857143 0.0357143 0 0.821429 0.142857 0.0714286 0.178571 0 0.75 0 0.178571 0.821429 0 0.285714 0 0.214286 0.5 0.142857 0 0.571429 0.285714 0.142857 0 0.0714286 0.785714 0 0.0357143 0.928571 0.0357143 0.142857 0 0 0.857143 0.107143 0.0714286 0.785714 0.0357143 0.0357143 0.142857 0 0.821429 0 0.107143 0.892857 0 0 0 0 1 0.25 0.0357143 0.714286 0 0.107143 0.0357143 0.0714286 0.785714 0.107143 0 0.642857 0.25 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 92 TFM11 Reverse Complement Reverse Complement Forward 2 14 0.00332777 Original Motif 0 0.769231 0 0.230769 0.730769 0 0.192308 0.0769231 0.346154 0.576923 0.0384615 0.0384615 0.923077 0.0769231 0 0 0.153846 0.769231 0.0769231 0 0.923077 0.0769231 0 0 0 0.807692 0.0769231 0.115385 0.846154 0.153846 0 0 0.115385 0.846154 0.0384615 0 0.807692 0 0 0.192308 0.0384615 0.884615 0 0.0769231 0.692308 0 0.0769231 0.230769 0.0769231 0.538462 0 0.384615 0.461538 0.0384615 0.269231 0.230769 0 0.807692 0.192308 0 0.807692 0.153846 0 0.0384615 0.0769231 0.692308 0 0.230769 0.807692 0 0.192308 0 0.0769231 0.730769 0.115385 0.0769231 0.923077 0 0 0.0769231 Reverse Complement Motif 0.0769231 0 0 0.923077 0.0769231 0.115385 0.730769 0.0769231 0 0 0.192308 0.807692 0.0769231 0 0.692308 0.230769 0.0384615 0.153846 0 0.807692 0 0.192308 0.807692 0 0.230769 0.0384615 0.269231 0.461538 0.0769231 0 0.538462 0.384615 0.230769 0 0.0769231 0.692308 0.0384615 0 0.884615 0.0769231 0.192308 0 0 0.807692 0.115385 0.0384615 0.846154 0 0 0.153846 0 0.846154 0 0.0769231 0.807692 0.115385 0 0.0769231 0 0.923077 0.153846 0.0769231 0.769231 0 0 0.0769231 0 0.923077 0.346154 0.0384615 0.576923 0.0384615 0.0769231 0 0.192308 0.730769 0 0 0.769231 0.230769 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 72 CACTGTGrYrtCACAGTGswsCAcT Reverse Complement Reverse Complement Backward 11 14 0.0819161 Original Motif 0.111111 0.746032 0.0634921 0.0793651 0.857143 0.047619 0.047619 0.047619 0.047619 0.857143 0.0793651 0.015873 0.031746 0 0 0.968254 0.031746 0.015873 0.904762 0.047619 0 0 0 1 0.031746 0 0.857143 0.111111 0.396825 0.111111 0.412698 0.0793651 0.031746 0.253968 0.015873 0.698413 0.365079 0 0.634921 0 0.0793651 0.206349 0.047619 0.666667 0.047619 0.936508 0.015873 0 0.952381 0 0.015873 0.031746 0.015873 0.920635 0 0.0634921 0.920635 0 0 0.0793651 0.0634921 0.047619 0.84127 0.047619 0 0 0.015873 0.984127 0.047619 0.015873 0.904762 0.031746 0.015873 0.603175 0.31746 0.0634921 0.396825 0 0.015873 0.587302 0.015873 0.47619 0.428571 0.0793651 0.0634921 0.920635 0 0.015873 0.920635 0.015873 0.047619 0.015873 0.0952381 0.68254 0.0952381 0.126984 0.047619 0.015873 0.0952381 0.84127 Reverse Complement Motif 0.84127 0.015873 0.0952381 0.047619 0.0952381 0.0952381 0.68254 0.126984 0.015873 0.015873 0.047619 0.920635 0.0634921 0 0.920635 0.015873 0.015873 0.428571 0.47619 0.0793651 0.587302 0 0.015873 0.396825 0.015873 0.31746 0.603175 0.0634921 0.047619 0.904762 0.015873 0.031746 0.984127 0 0.015873 0 0.0634921 0.84127 0.047619 0.047619 0.0793651 0 0 0.920635 0.015873 0 0.920635 0.0634921 0.031746 0 0.015873 0.952381 0.047619 0.015873 0.936508 0 0.666667 0.206349 0.047619 0.0793651 0.365079 0.634921 0 0 0.698413 0.253968 0.015873 0.031746 0.396825 0.412698 0.111111 0.0793651 0.031746 0.857143 0 0.111111 1 0 0 0 0.031746 0.904762 0.015873 0.047619 0.968254 0 0 0.031746 0.047619 0.0793651 0.857143 0.015873 0.047619 0.047619 0.047619 0.857143 0.111111 0.0634921 0.746032 0.0793651 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 91 TFM3 Reverse Complement Original Motif Backward 4 14 0.082111 Original Motif 0.0625 0.0625 0.3125 0.5625 0.125 0.0625 0 0.8125 0 0 0.0625 0.9375 0 0 0.1875 0.8125 0 0 0.125 0.875 0 0.25 0 0.75 0 0 0.125 0.875 0.1875 0 0.4375 0.375 0 0 0.125 0.875 0 0.125 0 0.875 0 0.0625 0 0.9375 0.125 0 0 0.875 0.125 0.0625 0 0.8125 0 0 0.25 0.75 0.25 0 0.375 0.375 0.9375 0.0625 0 0 0.9375 0 0 0.0625 0 0.3125 0.4375 0.25 Reverse Complement Motif 0 0.4375 0.3125 0.25 0.0625 0 0 0.9375 0 0.0625 0 0.9375 0.25 0.375 0 0.375 0.75 0 0.25 0 0.8125 0.0625 0 0.125 0.875 0 0 0.125 0.9375 0.0625 0 0 0.875 0.125 0 0 0.875 0 0.125 0 0.1875 0.4375 0 0.375 0.875 0 0.125 0 0.75 0.25 0 0 0.875 0 0.125 0 0.8125 0 0.1875 0 0.9375 0 0.0625 0 0.8125 0.0625 0 0.125 0.5625 0.0625 0.3125 0.0625 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 6 Motif 6 Original Motif Original Motif Backward 2 13 0.531086 Original Motif 0 0.857143 0 0.142857 0.904762 0 0 0.095238 0 0.571429 0.428571 0 1 0 0 0 0.047619 0.380952 0.285714 0.285714 0.52381 0.047619 0.238095 0.190476 0.047619 0.809524 0.142857 0 0.47619 0 0 0.52381 0.190476 0.333333 0.47619 0 1 0 0 0 0 0.666667 0.333333 0 1 0 0 0 0 1 0 0 0.857143 0 0 0.142857 Reverse Complement Motif 0.142857 0 0 0.857143 0 0 1 0 0 0 0 1 0 0.333333 0.666667 0 0 0 0 1 0.190476 0.47619 0.333333 0 0.52381 0 0 0.47619 0.047619 0.142857 0.809524 0 0.190476 0.047619 0.238095 0.52381 0.047619 0.285714 0.380952 0.285714 0 0 0 1 0 0.428571 0.571429 0 0.095238 0 0 0.904762 0 0 0.857143 0.142857 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 94 TFM13 Reverse Complement Original Motif Backward 8 13 0.576988 Original Motif 0.0714286 0.142857 0 0.785714 0.0714286 0.0714286 0 0.857143 0 0 0 1 0 0.0714286 0.285714 0.642857 0 0.142857 0 0.857143 0 0 0 1 0.0714286 0 0.0714286 0.857143 0.142857 0 0.357143 0.5 0.0714286 0 0 0.928571 0 0.0714286 0 0.928571 0 0 0.357143 0.642857 0 0 0 1 0 0 0.214286 0.785714 0.142857 0 0 0.857143 0.571429 0.0714286 0.214286 0.142857 0.857143 0 0 0.142857 0.142857 0 0.285714 0.571429 0 0.0714286 0.285714 0.642857 0.357143 0.357143 0.0714286 0.214286 0.428571 0 0.0714286 0.5 Reverse Complement Motif 0.5 0 0.0714286 0.428571 0.214286 0.357143 0.0714286 0.357143 0.642857 0.0714286 0.285714 0 0.571429 0 0.285714 0.142857 0.142857 0 0 0.857143 0.142857 0.0714286 0.214286 0.571429 0.857143 0 0 0.142857 0.785714 0 0.214286 0 1 0 0 0 0.642857 0 0.357143 0 0.928571 0.0714286 0 0 0.928571 0 0 0.0714286 0.5 0 0.357143 0.142857 0.857143 0 0.0714286 0.0714286 1 0 0 0 0.857143 0.142857 0 0 0.642857 0.0714286 0.285714 0 1 0 0 0 0.857143 0.0714286 0 0.0714286 0.785714 0.142857 0 0.0714286 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 4 Motif 4 Reverse Complement Reverse Complement Backward 2 13 0.579965 Original Motif 0.45 0.25 0 0.3 0.8 0 0 0.2 0.85 0 0.15 0 1 0 0 0 0.75 0 0.25 0 0.4 0.3 0.05 0.25 0.85 0.1 0 0.05 0.85 0.15 0 0 1 0 0 0 0.5 0.1 0.4 0 0.35 0.65 0 0 0.9 0 0.05 0.05 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 0.05 0 0.05 0.9 0.35 0 0.65 0 0 0.1 0.4 0.5 0 0 0 1 0 0.15 0 0.85 0.05 0.1 0 0.85 0.25 0.3 0.05 0.4 0 0 0.25 0.75 0 0 0 1 0 0 0.15 0.85 0.2 0 0 0.8 0.3 0.25 0 0.45 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 88 TFF11 Reverse Complement Original Motif Forward 4 11 1.5772 Original Motif 0.0985915 0.556338 0.246479 0.0985915 0.28169 0.00704225 0.0985915 0.612676 0.00704225 0.0211268 0.971831 0 0.00704225 0.971831 0.00704225 0.0140845 0.00704225 0 0 0.992958 0 0 1 0 0.176056 0.415493 0.232394 0.176056 0.267606 0.197183 0.267606 0.267606 0.119718 0.190141 0.401408 0.288732 0.0985915 0.43662 0.211268 0.253521 0.239437 0.15493 0.183099 0.422535 0.126761 0.140845 0.619718 0.112676 0.190141 0.28169 0.225352 0.302817 0.232394 0.176056 0.373239 0.21831 Reverse Complement Motif 0.232394 0.373239 0.176056 0.21831 0.302817 0.28169 0.225352 0.190141 0.126761 0.619718 0.140845 0.112676 0.422535 0.15493 0.183099 0.239437 0.0985915 0.211268 0.43662 0.253521 0.119718 0.401408 0.190141 0.288732 0.267606 0.197183 0.267606 0.267606 0.176056 0.232394 0.415493 0.176056 0 1 0 0 0.992958 0 0 0.00704225 0.00704225 0.00704225 0.971831 0.0140845 0.00704225 0.971831 0.0211268 0 0.612676 0.00704225 0.0985915 0.28169 0.0985915 0.246479 0.556338 0.0985915 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 87 TFF1 Original Motif Original Motif Forward 2 11 1.57782 Original Motif 0.894366 0.00704225 0.056338 0.0422535 0.0211268 0.0422535 0.922535 0.0140845 0.161972 0.0915493 0.661972 0.084507 0.535211 0.140845 0.126761 0.197183 0.00704225 0.957746 0.028169 0.00704225 0.957746 0.00704225 0.0352113 0 0.612676 0.225352 0.0915493 0.0704225 0.732394 0.028169 0.133803 0.105634 0.084507 0.183099 0.676056 0.056338 0.514085 0.15493 0.176056 0.15493 0.225352 0.190141 0.443662 0.140845 0.232394 0.352113 0.232394 0.183099 Reverse Complement Motif 0.232394 0.232394 0.352113 0.183099 0.225352 0.443662 0.190141 0.140845 0.15493 0.15493 0.176056 0.514085 0.084507 0.676056 0.183099 0.056338 0.105634 0.028169 0.133803 0.732394 0.0704225 0.225352 0.0915493 0.612676 0 0.00704225 0.0352113 0.957746 0.00704225 0.028169 0.957746 0.00704225 0.197183 0.140845 0.126761 0.535211 0.161972 0.661972 0.0915493 0.084507 0.0211268 0.922535 0.0422535 0.0140845 0.0422535 0.00704225 0.056338 0.894366 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 83 srACyCCGAyr Reverse Complement Reverse Complement Backward 1 11 1.58018 Original Motif 0 0.5 0.5 0 0.5 0 0.5 0 1 0 0 0 0 1 0 0 0 0.5 0 0.5 0 1 0 0 0 1 0 0 0 0 1 0 1 0 0 0 0 0.5 0 0.5 0.5 0 0.5 0 Reverse Complement Motif 0 0 0.5 0.5 0 0 0.5 0.5 0 0 0 1 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0.5 0.5 0 0 1 0 0 0 0 1 0 0 0.5 0.5 0 0.5 0.5 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # 1 Motif ID 3 Motif Name Motif 3 Original Motif 0.239437 0.274648 0.0774649 0.408451 0.084507 0.65493 0.147887 0.112676 0.753521 0 0 0.246479 0.309859 0 0.65493 0.035211 0.302817 0.049296 0.584507 0.06338 0.542254 0.007042 0.394366 0.056338 0.457746 0.253521 0.190141 0.098592 0.584507 0.169014 0.232394 0.014085 0.274648 0.62676 0.0985919 0 0.852112 0 0.021127 0.126761 0 0.570423 0.429577 0 0.760563 0 0 0.239437 0.204225 0.021127 0.774648 0 Reserve Complement Motif 0.204225 0.774648 0.021127 0 0.239437 0 0 0.760563 0 0.429577 0.570423 0 0.126761 0 0.021127 0.852112 0.274648 0.0985919 0.62676 0 0.014085 0.169014 0.232394 0.584507 0.098592 0.253521 0.190141 0.457746 0.056338 0.007042 0.394366 0.542254 0.302817 0.584507 0.049296 0.06338 0.309859 0.65493 0 0.035211 0.246479 0 0 0.753521 0.084507 0.147887 0.65493 0.112676 0.408451 0.274648 0.0774649 0.239437 ************************************************************************ Best Matches for Motif ID 3 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 93 TFM12 Original Motif Original Motif Forward 7 13 0.00926418 Original Motif 0.380282 0.211268 0.373239 0.0352113 0.746479 0.0422535 0.119718 0.0915493 0.28169 0.0492958 0.56338 0.105634 0.21831 0 0.443662 0.338028 0.161972 0.126761 0.598592 0.112676 0.267606 0.528169 0.176056 0.028169 0.640845 0.028169 0.0915493 0.239437 0.0633803 0.084507 0.809859 0.0422535 0.366197 0.246479 0.211268 0.176056 0.471831 0.140845 0.309859 0.0774648 0.373239 0 0.542254 0.084507 0.211268 0.105634 0.605634 0.0774648 0.197183 0.302817 0.478873 0.0211268 0.408451 0.140845 0.387324 0.0633803 0.0985915 0.704225 0.197183 0 0.683099 0.028169 0.0704225 0.21831 0.140845 0.373239 0.485915 0 0.788732 0 0.0633803 0.147887 0 0.169014 0.816901 0.0140845 0.274648 0.295775 0.239437 0.190141 Reverse Complement Motif 0.274648 0.239437 0.295775 0.190141 0 0.816901 0.169014 0.0140845 0.147887 0 0.0633803 0.788732 0.140845 0.485915 0.373239 0 0.21831 0.028169 0.0704225 0.683099 0.0985915 0.197183 0.704225 0 0.0633803 0.140845 0.387324 0.408451 0.197183 0.478873 0.302817 0.0211268 0.211268 0.605634 0.105634 0.0774648 0.373239 0.542254 0 0.084507 0.0774648 0.140845 0.309859 0.471831 0.176056 0.246479 0.211268 0.366197 0.0633803 0.809859 0.084507 0.0422535 0.239437 0.028169 0.0915493 0.640845 0.267606 0.176056 0.528169 0.028169 0.161972 0.598592 0.126761 0.112676 0.21831 0.443662 0 0.338028 0.28169 0.56338 0.0492958 0.105634 0.0915493 0.0422535 0.119718 0.746479 0.0352113 0.211268 0.373239 0.380282 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 53 ESR1 Original Motif Original Motif Forward 4 13 0.0328703 Original Motif 0.261242 0.256959 0.329764 0.152034 0.228632 0.17094 0.350427 0.25 0.136752 0.369658 0.318376 0.175214 0.176596 0.487234 0.138298 0.197872 0.285106 0.493617 0.1 0.121277 0.651163 0.0591966 0.188161 0.10148 0.0759494 0.0168776 0.816456 0.0907173 0.04 0.0378947 0.884211 0.0378947 0.0694737 0.0863158 0.191579 0.652632 0.00842105 0.829474 0.111579 0.0505263 0.837895 0.0273684 0.0568421 0.0778947 0.122105 0.526316 0.225263 0.126316 0.132632 0.581053 0.111579 0.174737 0.134737 0.543158 0.204211 0.117895 0.0673684 0.04 0.0168421 0.875789 0.0442105 0.0463158 0.896842 0.0126316 0.642105 0.223158 0.0652632 0.0694737 0.0210526 0.917895 0.0252632 0.0357895 0.124211 0.743158 0.00421053 0.128421 0.0547368 0.347368 0.0463158 0.551579 Reverse Complement Motif 0.551579 0.347368 0.0463158 0.0547368 0.124211 0.00421053 0.743158 0.128421 0.0210526 0.0252632 0.917895 0.0357895 0.0694737 0.223158 0.0652632 0.642105 0.0442105 0.896842 0.0463158 0.0126316 0.875789 0.04 0.0168421 0.0673684 0.134737 0.204211 0.543158 0.117895 0.132632 0.111579 0.581053 0.174737 0.122105 0.225263 0.526316 0.126316 0.0778947 0.0273684 0.0568421 0.837895 0.00842105 0.111579 0.829474 0.0505263 0.652632 0.0863158 0.191579 0.0694737 0.04 0.884211 0.0378947 0.0378947 0.0759494 0.816456 0.0168776 0.0907173 0.10148 0.0591966 0.188161 0.651163 0.285106 0.1 0.493617 0.121277 0.176596 0.138298 0.487234 0.197872 0.136752 0.318376 0.369658 0.175214 0.228632 0.350427 0.17094 0.25 0.261242 0.329764 0.256959 0.152034 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Reverse Complement Forward 11 13 0.0400966 Original Motif 0.111111 0.746032 0.0634921 0.0793651 0.857143 0.047619 0.047619 0.047619 0.047619 0.857143 0.0793651 0.015873 0.031746 0 0 0.968254 0.031746 0.015873 0.904762 0.047619 0 0 0 1 0.031746 0 0.857143 0.111111 0.396825 0.111111 0.412698 0.0793651 0.031746 0.253968 0.015873 0.698413 0.365079 0 0.634921 0 0.0793651 0.206349 0.047619 0.666667 0.047619 0.936508 0.015873 0 0.952381 0 0.015873 0.031746 0.015873 0.920635 0 0.0634921 0.920635 0 0 0.0793651 0.0634921 0.047619 0.84127 0.047619 0 0 0.015873 0.984127 0.047619 0.015873 0.904762 0.031746 0.015873 0.603175 0.31746 0.0634921 0.396825 0 0.015873 0.587302 0.015873 0.47619 0.428571 0.0793651 0.0634921 0.920635 0 0.015873 0.920635 0.015873 0.047619 0.015873 0.0952381 0.68254 0.0952381 0.126984 0.047619 0.015873 0.0952381 0.84127 Reverse Complement Motif 0.84127 0.015873 0.0952381 0.047619 0.0952381 0.0952381 0.68254 0.126984 0.015873 0.015873 0.047619 0.920635 0.0634921 0 0.920635 0.015873 0.015873 0.428571 0.47619 0.0793651 0.587302 0 0.015873 0.396825 0.015873 0.31746 0.603175 0.0634921 0.047619 0.904762 0.015873 0.031746 0.984127 0 0.015873 0 0.0634921 0.84127 0.047619 0.047619 0.0793651 0 0 0.920635 0.015873 0 0.920635 0.0634921 0.031746 0 0.015873 0.952381 0.047619 0.015873 0.936508 0 0.666667 0.206349 0.047619 0.0793651 0.365079 0.634921 0 0 0.698413 0.253968 0.015873 0.031746 0.396825 0.412698 0.111111 0.0793651 0.031746 0.857143 0 0.111111 1 0 0 0 0.031746 0.904762 0.015873 0.047619 0.968254 0 0 0.031746 0.047619 0.0793651 0.857143 0.015873 0.047619 0.047619 0.047619 0.857143 0.111111 0.0634921 0.746032 0.0793651 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 90 TFM2 Original Motif Reverse Complement Backward 4 13 0.0435274 Original Motif 0.105634 0.514085 0.15493 0.225352 0.239437 0.408451 0.0985915 0.253521 0.302817 0.239437 0.0422535 0.415493 0.147887 0.598592 0.169014 0.084507 0.316901 0.422535 0.0211268 0.239437 0.0492958 0.380282 0.21831 0.352113 0.183099 0.133803 0.0915493 0.591549 0 0.598592 0.246479 0.15493 0.0704225 0.753521 0 0.176056 0.232394 0 0.0633803 0.704225 0 0.394366 0.556338 0.0492958 0.0352113 0.901408 0 0.0633803 0.056338 0.591549 0 0.352113 0.119718 0.246479 0.028169 0.605634 0.028169 0.626761 0.253521 0.0915493 0.211268 0 0.0774648 0.711268 0.0633803 0.190141 0.65493 0.0915493 0.126761 0.584507 0 0.288732 Reverse Complement Motif 0.126761 0 0.584507 0.288732 0.0633803 0.65493 0.190141 0.0915493 0.711268 0 0.0774648 0.211268 0.028169 0.253521 0.626761 0.0915493 0.605634 0.246479 0.028169 0.119718 0.056338 0 0.591549 0.352113 0.0352113 0 0.901408 0.0633803 0 0.556338 0.394366 0.0492958 0.704225 0 0.0633803 0.232394 0.0704225 0 0.753521 0.176056 0 0.246479 0.598592 0.15493 0.591549 0.133803 0.0915493 0.183099 0.0492958 0.21831 0.380282 0.352113 0.316901 0.0211268 0.422535 0.239437 0.147887 0.169014 0.598592 0.084507 0.415493 0.239437 0.0422535 0.302817 0.239437 0.0985915 0.408451 0.253521 0.105634 0.15493 0.514085 0.225352 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 66 CTCF Original Motif Original Motif Backward 1 13 0.0448341 Original Motif 0.0952903 0.318729 0.0832421 0.502738 0.182913 0.158817 0.45345 0.204819 0.307777 0.0536692 0.491785 0.146769 0.0613363 0.876232 0.0230011 0.0394304 0.00876232 0.989047 0 0.00219058 0.814896 0.0142388 0.0711939 0.0996714 0.0438116 0.578313 0.365827 0.0120482 0.117325 0.474781 0.0526316 0.355263 0.933114 0.0120614 0.0350877 0.0197368 0.00548847 0 0.991218 0.00329308 0.365532 0.00329308 0.621295 0.00987925 0.0592755 0.0131723 0.553238 0.374314 0.0131868 0 0.978022 0.00879121 0.0615385 0.00879121 0.851648 0.078022 0.114411 0.806381 0.00550055 0.0737074 0.409241 0.0143014 0.557756 0.0187019 0.0903084 0.530837 0.338106 0.0407489 0.128855 0.354626 0.0803965 0.436123 0.442731 0.199339 0.292952 0.064978 Reverse Complement Motif 0.064978 0.199339 0.292952 0.442731 0.436123 0.354626 0.0803965 0.128855 0.0903084 0.338106 0.530837 0.0407489 0.409241 0.557756 0.0143014 0.0187019 0.114411 0.00550055 0.806381 0.0737074 0.0615385 0.851648 0.00879121 0.078022 0.0131868 0.978022 0 0.00879121 0.0592755 0.553238 0.0131723 0.374314 0.365532 0.621295 0.00329308 0.00987925 0.00548847 0.991218 0 0.00329308 0.0197368 0.0120614 0.0350877 0.933114 0.117325 0.0526316 0.474781 0.355263 0.0438116 0.365827 0.578313 0.0120482 0.0996714 0.0142388 0.0711939 0.814896 0.00876232 0 0.989047 0.00219058 0.0613363 0.0230011 0.876232 0.0394304 0.307777 0.491785 0.0536692 0.146769 0.182913 0.45345 0.158817 0.204819 0.502738 0.318729 0.0832421 0.0952903 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 73 TGGAGCACTGTGACAcCACAGTGg Reverse Complement Reverse Complement Backward 9 13 0.045698 Original Motif 0.0540541 0.0405405 0.0540541 0.851351 0.0405405 0.0135135 0.824324 0.121622 0.0945946 0.135135 0.756757 0.0135135 0.891892 0 0 0.108108 0.0405405 0.0945946 0.810811 0.0540541 0.0810811 0.797297 0.0540541 0.0675676 0.932432 0.027027 0 0.0405405 0.0540541 0.756757 0.135135 0.0540541 0.108108 0.027027 0.0135135 0.851351 0.108108 0 0.851351 0.0405405 0.0135135 0 0.027027 0.959459 0 0.0135135 0.945946 0.0405405 0.905405 0 0.0675676 0.027027 0.0540541 0.837838 0 0.108108 0.945946 0.0135135 0.0405405 0 0.162162 0.5 0.189189 0.148649 0.108108 0.824324 0 0.0675676 0.945946 0 0.0405405 0.0135135 0.0810811 0.837838 0.027027 0.0540541 0.945946 0 0.0135135 0.0405405 0.0540541 0.0675676 0.783784 0.0945946 0.0540541 0.027027 0 0.918919 0.0405405 0.0135135 0.864865 0.0810811 0.148649 0.121622 0.675676 0.0540541 Reverse Complement Motif 0.148649 0.675676 0.121622 0.0540541 0.0405405 0.864865 0.0135135 0.0810811 0.918919 0.027027 0 0.0540541 0.0540541 0.783784 0.0675676 0.0945946 0.0405405 0 0.0135135 0.945946 0.0810811 0.027027 0.837838 0.0540541 0.0135135 0 0.0405405 0.945946 0.108108 0 0.824324 0.0675676 0.162162 0.189189 0.5 0.148649 0 0.0135135 0.0405405 0.945946 0.0540541 0 0.837838 0.108108 0.027027 0 0.0675676 0.905405 0 0.945946 0.0135135 0.0405405 0.959459 0 0.027027 0.0135135 0.108108 0.851351 0 0.0405405 0.851351 0.027027 0.0135135 0.108108 0.0540541 0.135135 0.756757 0.0540541 0.0405405 0.027027 0 0.932432 0.0810811 0.0540541 0.797297 0.0675676 0.0405405 0.810811 0.0945946 0.0540541 0.108108 0 0 0.891892 0.0945946 0.756757 0.135135 0.0135135 0.0405405 0.824324 0.0135135 0.121622 0.851351 0.0405405 0.0540541 0.0540541 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 64 PPARGRXRA Original Motif Original Motif Backward 3 13 0.0457253 Original Motif 0.109685 0.369895 0.373396 0.147025 0.117716 0.193473 0.148019 0.540793 0.453488 0.0267442 0.427907 0.0918605 0.116144 0.00348432 0.779326 0.101045 0.161253 0.0174014 0.781903 0.0394432 0.168213 0.149652 0.458237 0.223898 0.0822711 0.633835 0.207416 0.0764774 0.949015 0.0243337 0.0173812 0.00926999 0.604867 0.0556199 0.312862 0.0266512 0.825231 0.00578704 0.158565 0.0104167 0.0950174 0.0023175 0.88876 0.013905 0.0475087 0.0104287 0.803013 0.13905 0.0254925 0.114716 0.304751 0.555041 0.062645 0.643852 0.167053 0.12645 0.784223 0.0672854 0.0545244 0.0939675 Reverse Complement Motif 0.0939675 0.0672854 0.0545244 0.784223 0.062645 0.167053 0.643852 0.12645 0.555041 0.114716 0.304751 0.0254925 0.0475087 0.803013 0.0104287 0.13905 0.0950174 0.88876 0.0023175 0.013905 0.0104167 0.00578704 0.158565 0.825231 0.0266512 0.0556199 0.312862 0.604867 0.00926999 0.0243337 0.0173812 0.949015 0.0822711 0.207416 0.633835 0.0764774 0.168213 0.458237 0.149652 0.223898 0.161253 0.781903 0.0174014 0.0394432 0.116144 0.779326 0.00348432 0.101045 0.0918605 0.0267442 0.427907 0.453488 0.540793 0.193473 0.148019 0.117716 0.109685 0.373396 0.369895 0.147025 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 65 Tcfcp2l1 Reverse Complement Reverse Complement Backward 2 13 0.0477557 Original Motif 0.00196754 0.92548 0.0627152 0.00983768 0.069973 0.807513 0.00540142 0.117113 0.594508 0.00514832 0.275803 0.12454 0.0058838 0.0237803 0.967149 0.00318706 0.175477 0.33627 0.0256975 0.462555 0.0983847 0.28928 0.0621635 0.550171 0.173924 0.39726 0.151174 0.277642 0.357213 0.224939 0.252323 0.165526 0.63154 0.0696822 0.190954 0.107824 0.394421 0.0513824 0.310497 0.2437 0.00366928 0.933219 0.0547945 0.00831703 0.0617193 0.812148 0.00293902 0.123194 0.536555 0.00736016 0.305937 0.150147 0.0120393 0.0289926 0.954791 0.0041769 Reverse Complement Motif 0.0120393 0.954791 0.0289926 0.0041769 0.150147 0.00736016 0.305937 0.536555 0.0617193 0.00293902 0.812148 0.123194 0.00366928 0.0547945 0.933219 0.00831703 0.2437 0.0513824 0.310497 0.394421 0.107824 0.0696822 0.190954 0.63154 0.165526 0.224939 0.252323 0.357213 0.173924 0.151174 0.39726 0.277642 0.550171 0.28928 0.0621635 0.0983847 0.462555 0.33627 0.0256975 0.175477 0.0058838 0.967149 0.0237803 0.00318706 0.12454 0.00514832 0.275803 0.594508 0.069973 0.00540142 0.807513 0.117113 0.00196754 0.0627152 0.92548 0.00983768 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 94 TFM13 Original Motif Reverse Complement Forward 5 13 0.0478998 Original Motif 0.0714286 0.142857 0 0.785714 0.0714286 0.0714286 0 0.857143 0 0 0 1 0 0.0714286 0.285714 0.642857 0 0.142857 0 0.857143 0 0 0 1 0.0714286 0 0.0714286 0.857143 0.142857 0 0.357143 0.5 0.0714286 0 0 0.928571 0 0.0714286 0 0.928571 0 0 0.357143 0.642857 0 0 0 1 0 0 0.214286 0.785714 0.142857 0 0 0.857143 0.571429 0.0714286 0.214286 0.142857 0.857143 0 0 0.142857 0.142857 0 0.285714 0.571429 0 0.0714286 0.285714 0.642857 0.357143 0.357143 0.0714286 0.214286 0.428571 0 0.0714286 0.5 Reverse Complement Motif 0.5 0 0.0714286 0.428571 0.214286 0.357143 0.0714286 0.357143 0.642857 0.0714286 0.285714 0 0.571429 0 0.285714 0.142857 0.142857 0 0 0.857143 0.142857 0.0714286 0.214286 0.571429 0.857143 0 0 0.142857 0.785714 0 0.214286 0 1 0 0 0 0.642857 0 0.357143 0 0.928571 0.0714286 0 0 0.928571 0 0 0.0714286 0.5 0 0.357143 0.142857 0.857143 0 0.0714286 0.0714286 1 0 0 0 0.857143 0.142857 0 0 0.642857 0.0714286 0.285714 0 1 0 0 0 0.857143 0.0714286 0 0.0714286 0.785714 0.142857 0 0.0714286 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 88 TFF11 Original Motif Reverse Complement Backward 1 13 0.048132 Original Motif 0.0985915 0.556338 0.246479 0.0985915 0.28169 0.00704225 0.0985915 0.612676 0.00704225 0.0211268 0.971831 0 0.00704225 0.971831 0.00704225 0.0140845 0.00704225 0 0 0.992958 0 0 1 0 0.176056 0.415493 0.232394 0.176056 0.267606 0.197183 0.267606 0.267606 0.119718 0.190141 0.401408 0.288732 0.0985915 0.43662 0.211268 0.253521 0.239437 0.15493 0.183099 0.422535 0.126761 0.140845 0.619718 0.112676 0.190141 0.28169 0.225352 0.302817 0.232394 0.176056 0.373239 0.21831 Reverse Complement Motif 0.232394 0.373239 0.176056 0.21831 0.302817 0.28169 0.225352 0.190141 0.126761 0.619718 0.140845 0.112676 0.422535 0.15493 0.183099 0.239437 0.0985915 0.211268 0.43662 0.253521 0.119718 0.401408 0.190141 0.288732 0.267606 0.197183 0.267606 0.267606 0.176056 0.232394 0.415493 0.176056 0 1 0 0 0.992958 0 0 0.00704225 0.00704225 0.00704225 0.971831 0.0140845 0.00704225 0.971831 0.0211268 0 0.612676 0.00704225 0.0985915 0.28169 0.0985915 0.246479 0.556338 0.0985915 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # 1 Motif ID 4 Motif Name Motif 4 Original Motif 0.45 0.25 0 0.3 0.8 0 0 0.2 0.85 0 0.15 0 1 0 0 0 0.75 0 0.25 0 0.4 0.3 0.05 0.25 0.85 0.1 0 0.05 0.85 0.15 0 0 1 0 0 0 0.5 0.1 0.4 0 0.35 0.65 0 0 0.9 0 0.05 0.05 1 0 0 0 1 0 0 0 Reserve Complement Motif 0 0 0 1 0 0 0 1 0.05 0 0.05 0.9 0.35 0 0.65 0 0 0.1 0.4 0.5 0 0 0 1 0 0.15 0 0.85 0.05 0.1 0 0.85 0.25 0.3 0.05 0.4 0 0 0.25 0.75 0 0 0 1 0 0 0.15 0.85 0.2 0 0 0.8 0.3 0.25 0 0.45 ************************************************************************ Best Matches for Motif ID 4 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 94 TFM13 Original Motif Reverse Complement Forward 6 14 0.0333546 Original Motif 0.0714286 0.142857 0 0.785714 0.0714286 0.0714286 0 0.857143 0 0 0 1 0 0.0714286 0.285714 0.642857 0 0.142857 0 0.857143 0 0 0 1 0.0714286 0 0.0714286 0.857143 0.142857 0 0.357143 0.5 0.0714286 0 0 0.928571 0 0.0714286 0 0.928571 0 0 0.357143 0.642857 0 0 0 1 0 0 0.214286 0.785714 0.142857 0 0 0.857143 0.571429 0.0714286 0.214286 0.142857 0.857143 0 0 0.142857 0.142857 0 0.285714 0.571429 0 0.0714286 0.285714 0.642857 0.357143 0.357143 0.0714286 0.214286 0.428571 0 0.0714286 0.5 Reverse Complement Motif 0.5 0 0.0714286 0.428571 0.214286 0.357143 0.0714286 0.357143 0.642857 0.0714286 0.285714 0 0.571429 0 0.285714 0.142857 0.142857 0 0 0.857143 0.142857 0.0714286 0.214286 0.571429 0.857143 0 0 0.142857 0.785714 0 0.214286 0 1 0 0 0 0.642857 0 0.357143 0 0.928571 0.0714286 0 0 0.928571 0 0 0.0714286 0.5 0 0.357143 0.142857 0.857143 0 0.0714286 0.0714286 1 0 0 0 0.857143 0.142857 0 0 0.642857 0.0714286 0.285714 0 1 0 0 0 0.857143 0.0714286 0 0.0714286 0.785714 0.142857 0 0.0714286 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 91 TFM3 Original Motif Reverse Complement Backward 2 14 0.0408482 Original Motif 0.0625 0.0625 0.3125 0.5625 0.125 0.0625 0 0.8125 0 0 0.0625 0.9375 0 0 0.1875 0.8125 0 0 0.125 0.875 0 0.25 0 0.75 0 0 0.125 0.875 0.1875 0 0.4375 0.375 0 0 0.125 0.875 0 0.125 0 0.875 0 0.0625 0 0.9375 0.125 0 0 0.875 0.125 0.0625 0 0.8125 0 0 0.25 0.75 0.25 0 0.375 0.375 0.9375 0.0625 0 0 0.9375 0 0 0.0625 0 0.3125 0.4375 0.25 Reverse Complement Motif 0 0.4375 0.3125 0.25 0.0625 0 0 0.9375 0 0.0625 0 0.9375 0.25 0.375 0 0.375 0.75 0 0.25 0 0.8125 0.0625 0 0.125 0.875 0 0 0.125 0.9375 0.0625 0 0 0.875 0.125 0 0 0.875 0 0.125 0 0.1875 0.4375 0 0.375 0.875 0 0.125 0 0.75 0.25 0 0 0.875 0 0.125 0 0.8125 0 0.1875 0 0.9375 0 0.0625 0 0.8125 0.0625 0 0.125 0.5625 0.0625 0.3125 0.0625 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 2 49 Motif 49 Original Motif Original Motif Forward 1 14 0.0486607 Original Motif 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 Reverse Complement Motif 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 33 Motif 33 Reverse Complement Original Motif Backward 1 14 0.0540179 Original Motif 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0.5 0 0.5 0 0 0 1 0 0 0 1 0 0 0 1 0.5 0 0 0.5 1 0 0 0 Reverse Complement Motif 0 0 0 1 0.5 0 0 0.5 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0.5 0.5 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 92 TFM11 Reverse Complement Reverse Complement Forward 3 14 0.0882898 Original Motif 0 0.769231 0 0.230769 0.730769 0 0.192308 0.0769231 0.346154 0.576923 0.0384615 0.0384615 0.923077 0.0769231 0 0 0.153846 0.769231 0.0769231 0 0.923077 0.0769231 0 0 0 0.807692 0.0769231 0.115385 0.846154 0.153846 0 0 0.115385 0.846154 0.0384615 0 0.807692 0 0 0.192308 0.0384615 0.884615 0 0.0769231 0.692308 0 0.0769231 0.230769 0.0769231 0.538462 0 0.384615 0.461538 0.0384615 0.269231 0.230769 0 0.807692 0.192308 0 0.807692 0.153846 0 0.0384615 0.0769231 0.692308 0 0.230769 0.807692 0 0.192308 0 0.0769231 0.730769 0.115385 0.0769231 0.923077 0 0 0.0769231 Reverse Complement Motif 0.0769231 0 0 0.923077 0.0769231 0.115385 0.730769 0.0769231 0 0 0.192308 0.807692 0.0769231 0 0.692308 0.230769 0.0384615 0.153846 0 0.807692 0 0.192308 0.807692 0 0.230769 0.0384615 0.269231 0.461538 0.0769231 0 0.538462 0.384615 0.230769 0 0.0769231 0.692308 0.0384615 0 0.884615 0.0769231 0.192308 0 0 0.807692 0.115385 0.0384615 0.846154 0 0 0.153846 0 0.846154 0 0.0769231 0.807692 0.115385 0 0.0769231 0 0.923077 0.153846 0.0769231 0.769231 0 0 0.0769231 0 0.923077 0.346154 0.0384615 0.576923 0.0384615 0.0769231 0 0.192308 0.730769 0 0 0.769231 0.230769 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 89 TFM1 Original Motif Original Motif Backward 5 14 0.0933036 Original Motif 0.107143 0.642857 0 0.25 0.785714 0.0357143 0.0714286 0.107143 0.25 0.714286 0.0357143 0 1 0 0 0 0 0.892857 0.107143 0 0.821429 0.142857 0 0.0357143 0.107143 0.785714 0.0714286 0.0357143 0.857143 0 0 0.142857 0 0.928571 0.0357143 0.0357143 0.785714 0 0.0714286 0.142857 0.142857 0.571429 0 0.285714 0.5 0 0.214286 0.285714 0 0.821429 0.178571 0 0.75 0.178571 0 0.0714286 0.0357143 0.821429 0 0.142857 0.857143 0.0357143 0.107143 0 0.178571 0.642857 0.178571 0 0.964286 0 0.0357143 0 Reverse Complement Motif 0 0 0.0357143 0.964286 0.178571 0.178571 0.642857 0 0 0.0357143 0.107143 0.857143 0.0357143 0 0.821429 0.142857 0.0714286 0.178571 0 0.75 0 0.178571 0.821429 0 0.285714 0 0.214286 0.5 0.142857 0 0.571429 0.285714 0.142857 0 0.0714286 0.785714 0 0.0357143 0.928571 0.0357143 0.142857 0 0 0.857143 0.107143 0.0714286 0.785714 0.0357143 0.0357143 0.142857 0 0.821429 0 0.107143 0.892857 0 0 0 0 1 0.25 0.0357143 0.714286 0 0.107143 0.0357143 0.0714286 0.785714 0.107143 0 0.642857 0.25 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 6 Motif 6 Original Motif Original Motif Backward 1 14 0.0942815 Original Motif 0 0.857143 0 0.142857 0.904762 0 0 0.095238 0 0.571429 0.428571 0 1 0 0 0 0.047619 0.380952 0.285714 0.285714 0.52381 0.047619 0.238095 0.190476 0.047619 0.809524 0.142857 0 0.47619 0 0 0.52381 0.190476 0.333333 0.47619 0 1 0 0 0 0 0.666667 0.333333 0 1 0 0 0 0 1 0 0 0.857143 0 0 0.142857 Reverse Complement Motif 0.142857 0 0 0.857143 0 0 1 0 0 0 0 1 0 0.333333 0.666667 0 0 0 0 1 0.190476 0.47619 0.333333 0 0.52381 0 0 0.47619 0.047619 0.142857 0.809524 0 0.190476 0.047619 0.238095 0.52381 0.047619 0.285714 0.380952 0.285714 0 0 0 1 0 0.428571 0.571429 0 0.095238 0 0 0.904762 0 0 0.857143 0.142857 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 93 TFM12 Original Motif Original Motif Forward 5 14 0.096284 Original Motif 0.380282 0.211268 0.373239 0.0352113 0.746479 0.0422535 0.119718 0.0915493 0.28169 0.0492958 0.56338 0.105634 0.21831 0 0.443662 0.338028 0.161972 0.126761 0.598592 0.112676 0.267606 0.528169 0.176056 0.028169 0.640845 0.028169 0.0915493 0.239437 0.0633803 0.084507 0.809859 0.0422535 0.366197 0.246479 0.211268 0.176056 0.471831 0.140845 0.309859 0.0774648 0.373239 0 0.542254 0.084507 0.211268 0.105634 0.605634 0.0774648 0.197183 0.302817 0.478873 0.0211268 0.408451 0.140845 0.387324 0.0633803 0.0985915 0.704225 0.197183 0 0.683099 0.028169 0.0704225 0.21831 0.140845 0.373239 0.485915 0 0.788732 0 0.0633803 0.147887 0 0.169014 0.816901 0.0140845 0.274648 0.295775 0.239437 0.190141 Reverse Complement Motif 0.274648 0.239437 0.295775 0.190141 0 0.816901 0.169014 0.0140845 0.147887 0 0.0633803 0.788732 0.140845 0.485915 0.373239 0 0.21831 0.028169 0.0704225 0.683099 0.0985915 0.197183 0.704225 0 0.0633803 0.140845 0.387324 0.408451 0.197183 0.478873 0.302817 0.0211268 0.211268 0.605634 0.105634 0.0774648 0.373239 0.542254 0 0.084507 0.0774648 0.140845 0.309859 0.471831 0.176056 0.246479 0.211268 0.366197 0.0633803 0.809859 0.084507 0.0422535 0.239437 0.028169 0.0915493 0.640845 0.267606 0.176056 0.528169 0.028169 0.161972 0.598592 0.126761 0.112676 0.21831 0.443662 0 0.338028 0.28169 0.56338 0.0492958 0.105634 0.0915493 0.0422535 0.119718 0.746479 0.0352113 0.211268 0.373239 0.380282 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 45 Motif 45 Reverse Complement Original Motif Backward 2 13 0.563221 Original Motif 0 0 0 1 1 0 0 0 1 0 0 0 0 0.5 0.5 0 0 0 0 1 0 1 0 0 0 0 0 1 0.5 0 0 0.5 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0.5 0 0 0.5 1 0 0 0 0 0 1 0 1 0 0 0 0 0.5 0.5 0 0 0 0 1 0 0 0 1 1 0 0 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 15 Motif 15 Reverse Complement Reverse Complement Backward 1 13 0.572837 Original Motif 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0.5 0 0.5 0 0 0 0 1 0.5 0.5 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 1 1 0 0 0 Reverse Complement Motif 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0.5 0 0.5 1 0 0 0 0 0 0.5 0.5 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # 1 Motif ID 5 Motif Name Motif 5 Original Motif 0 0.8125 0.125 0.0625 0.375 0 0 0.625 0.0625 0 0.9375 0 0.5625 0.125 0.1875 0.125 0 0 1 0 0.0625 0.9375 0 0 0 0.9375 0.0625 0 1 0 0 0 0 0.625 0 0.375 0 0.9375 0.0625 0 0 0 0 1 0 0.5625 0 0.4375 0 0.125 0.125 0.75 0.0625 0.625 0 0.3125 Reserve Complement Motif 0.0625 0 0.625 0.3125 0.75 0.125 0.125 0 0 0 0.5625 0.4375 1 0 0 0 0 0.0625 0.9375 0 0 0 0.625 0.375 0 0 0 1 0 0.0625 0.9375 0 0.0625 0 0.9375 0 0 1 0 0 0.125 0.125 0.1875 0.5625 0.0625 0.9375 0 0 0.625 0 0 0.375 0 0.125 0.8125 0.0625 ************************************************************************ Best Matches for Motif ID 5 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 66 CTCF Reverse Complement Original Motif Forward 6 14 0.0474988 Original Motif 0.0952903 0.318729 0.0832421 0.502738 0.182913 0.158817 0.45345 0.204819 0.307777 0.0536692 0.491785 0.146769 0.0613363 0.876232 0.0230011 0.0394304 0.00876232 0.989047 0 0.00219058 0.814896 0.0142388 0.0711939 0.0996714 0.0438116 0.578313 0.365827 0.0120482 0.117325 0.474781 0.0526316 0.355263 0.933114 0.0120614 0.0350877 0.0197368 0.00548847 0 0.991218 0.00329308 0.365532 0.00329308 0.621295 0.00987925 0.0592755 0.0131723 0.553238 0.374314 0.0131868 0 0.978022 0.00879121 0.0615385 0.00879121 0.851648 0.078022 0.114411 0.806381 0.00550055 0.0737074 0.409241 0.0143014 0.557756 0.0187019 0.0903084 0.530837 0.338106 0.0407489 0.128855 0.354626 0.0803965 0.436123 0.442731 0.199339 0.292952 0.064978 Reverse Complement Motif 0.064978 0.199339 0.292952 0.442731 0.436123 0.354626 0.0803965 0.128855 0.0903084 0.338106 0.530837 0.0407489 0.409241 0.557756 0.0143014 0.0187019 0.114411 0.00550055 0.806381 0.0737074 0.0615385 0.851648 0.00879121 0.078022 0.0131868 0.978022 0 0.00879121 0.0592755 0.553238 0.0131723 0.374314 0.365532 0.621295 0.00329308 0.00987925 0.00548847 0.991218 0 0.00329308 0.0197368 0.0120614 0.0350877 0.933114 0.117325 0.0526316 0.474781 0.355263 0.0438116 0.365827 0.578313 0.0120482 0.0996714 0.0142388 0.0711939 0.814896 0.00876232 0 0.989047 0.00219058 0.0613363 0.0230011 0.876232 0.0394304 0.307777 0.491785 0.0536692 0.146769 0.182913 0.45345 0.158817 0.204819 0.502738 0.318729 0.0832421 0.0952903 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 73 TGGAGCACTGTGACAcCACAGTGg Reverse Complement Reverse Complement Forward 4 14 0.0554531 Original Motif 0.0540541 0.0405405 0.0540541 0.851351 0.0405405 0.0135135 0.824324 0.121622 0.0945946 0.135135 0.756757 0.0135135 0.891892 0 0 0.108108 0.0405405 0.0945946 0.810811 0.0540541 0.0810811 0.797297 0.0540541 0.0675676 0.932432 0.027027 0 0.0405405 0.0540541 0.756757 0.135135 0.0540541 0.108108 0.027027 0.0135135 0.851351 0.108108 0 0.851351 0.0405405 0.0135135 0 0.027027 0.959459 0 0.0135135 0.945946 0.0405405 0.905405 0 0.0675676 0.027027 0.0540541 0.837838 0 0.108108 0.945946 0.0135135 0.0405405 0 0.162162 0.5 0.189189 0.148649 0.108108 0.824324 0 0.0675676 0.945946 0 0.0405405 0.0135135 0.0810811 0.837838 0.027027 0.0540541 0.945946 0 0.0135135 0.0405405 0.0540541 0.0675676 0.783784 0.0945946 0.0540541 0.027027 0 0.918919 0.0405405 0.0135135 0.864865 0.0810811 0.148649 0.121622 0.675676 0.0540541 Reverse Complement Motif 0.148649 0.675676 0.121622 0.0540541 0.0405405 0.864865 0.0135135 0.0810811 0.918919 0.027027 0 0.0540541 0.0540541 0.783784 0.0675676 0.0945946 0.0405405 0 0.0135135 0.945946 0.0810811 0.027027 0.837838 0.0540541 0.0135135 0 0.0405405 0.945946 0.108108 0 0.824324 0.0675676 0.162162 0.189189 0.5 0.148649 0 0.0135135 0.0405405 0.945946 0.0540541 0 0.837838 0.108108 0.027027 0 0.0675676 0.905405 0 0.945946 0.0135135 0.0405405 0.959459 0 0.027027 0.0135135 0.108108 0.851351 0 0.0405405 0.851351 0.027027 0.0135135 0.108108 0.0540541 0.135135 0.756757 0.0540541 0.0405405 0.027027 0 0.932432 0.0810811 0.0540541 0.797297 0.0675676 0.0405405 0.810811 0.0945946 0.0540541 0.108108 0 0 0.891892 0.0945946 0.756757 0.135135 0.0135135 0.0405405 0.824324 0.0135135 0.121622 0.851351 0.0405405 0.0540541 0.0540541 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 93 TFM12 Original Motif Reverse Complement Forward 4 14 0.0576317 Original Motif 0.380282 0.211268 0.373239 0.0352113 0.746479 0.0422535 0.119718 0.0915493 0.28169 0.0492958 0.56338 0.105634 0.21831 0 0.443662 0.338028 0.161972 0.126761 0.598592 0.112676 0.267606 0.528169 0.176056 0.028169 0.640845 0.028169 0.0915493 0.239437 0.0633803 0.084507 0.809859 0.0422535 0.366197 0.246479 0.211268 0.176056 0.471831 0.140845 0.309859 0.0774648 0.373239 0 0.542254 0.084507 0.211268 0.105634 0.605634 0.0774648 0.197183 0.302817 0.478873 0.0211268 0.408451 0.140845 0.387324 0.0633803 0.0985915 0.704225 0.197183 0 0.683099 0.028169 0.0704225 0.21831 0.140845 0.373239 0.485915 0 0.788732 0 0.0633803 0.147887 0 0.169014 0.816901 0.0140845 0.274648 0.295775 0.239437 0.190141 Reverse Complement Motif 0.274648 0.239437 0.295775 0.190141 0 0.816901 0.169014 0.0140845 0.147887 0 0.0633803 0.788732 0.140845 0.485915 0.373239 0 0.21831 0.028169 0.0704225 0.683099 0.0985915 0.197183 0.704225 0 0.0633803 0.140845 0.387324 0.408451 0.197183 0.478873 0.302817 0.0211268 0.211268 0.605634 0.105634 0.0774648 0.373239 0.542254 0 0.084507 0.0774648 0.140845 0.309859 0.471831 0.176056 0.246479 0.211268 0.366197 0.0633803 0.809859 0.084507 0.0422535 0.239437 0.028169 0.0915493 0.640845 0.267606 0.176056 0.528169 0.028169 0.161972 0.598592 0.126761 0.112676 0.21831 0.443662 0 0.338028 0.28169 0.56338 0.0492958 0.105634 0.0915493 0.0422535 0.119718 0.746479 0.0352113 0.211268 0.373239 0.380282 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 77 AgTGCTCCACTGTGgTGTCACAgT Original Motif Reverse Complement Backward 10 14 0.0576632 Original Motif 0.690141 0.126761 0.0422535 0.140845 0.169014 0.0985915 0.676056 0.056338 0.0422535 0.028169 0.028169 0.901408 0.056338 0 0.774648 0.169014 0.0422535 0.887324 0.0422535 0.028169 0 0.0140845 0 0.985915 0.056338 0.830986 0.0422535 0.0704225 0.028169 0.957746 0.0140845 0 0.957746 0 0.0140845 0.028169 0.084507 0.84507 0.0140845 0.056338 0.028169 0.0140845 0 0.957746 0.140845 0.028169 0.802817 0.028169 0.0140845 0.0140845 0.0140845 0.957746 0.0140845 0 0.929577 0.056338 0.056338 0.15493 0.619718 0.169014 0.0140845 0.028169 0 0.957746 0.056338 0.0140845 0.873239 0.056338 0.0140845 0 0 0.985915 0.0422535 0.929577 0 0.028169 0.957746 0.028169 0 0.0140845 0.028169 0.84507 0.028169 0.0985915 0.873239 0.0140845 0.0422535 0.0704225 0.0985915 0.15493 0.56338 0.183099 0.0704225 0.0140845 0.112676 0.802817 Reverse Complement Motif 0.802817 0.0140845 0.112676 0.0704225 0.0985915 0.56338 0.15493 0.183099 0.0704225 0.0140845 0.0422535 0.873239 0.028169 0.028169 0.84507 0.0985915 0.0140845 0.028169 0 0.957746 0.0422535 0 0.929577 0.028169 0.985915 0 0 0.0140845 0.056338 0.873239 0.0140845 0.056338 0.957746 0.028169 0 0.0140845 0.056338 0.619718 0.15493 0.169014 0.0140845 0.929577 0 0.056338 0.957746 0.0140845 0.0140845 0.0140845 0.140845 0.802817 0.028169 0.028169 0.957746 0.0140845 0 0.028169 0.084507 0.0140845 0.84507 0.056338 0.028169 0 0.0140845 0.957746 0.028169 0.0140845 0.957746 0 0.056338 0.0422535 0.830986 0.0704225 0.985915 0.0140845 0 0 0.0422535 0.0422535 0.887324 0.028169 0.056338 0.774648 0 0.169014 0.901408 0.028169 0.028169 0.0422535 0.169014 0.676056 0.0985915 0.056338 0.140845 0.126761 0.0422535 0.690141 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 71 AmTGTGACACCACAGT Original Motif Original Motif Forward 2 14 0.0578361 Original Motif 0.703125 0.1875 0.015625 0.09375 0.265625 0.5 0.125 0.109375 0.015625 0.046875 0.03125 0.90625 0.078125 0.015625 0.890625 0.015625 0 0 0 1 0 0.03125 0.90625 0.0625 0.953125 0 0.015625 0.03125 0.046875 0.890625 0 0.0625 0.96875 0 0.015625 0.015625 0.109375 0.78125 0.0625 0.046875 0.0625 0.890625 0 0.046875 0.953125 0 0.03125 0.015625 0.03125 0.78125 0.046875 0.140625 0.9375 0.015625 0.03125 0.015625 0.09375 0.078125 0.734375 0.09375 0.03125 0.078125 0 0.890625 Reverse Complement Motif 0.890625 0.078125 0 0.03125 0.09375 0.734375 0.078125 0.09375 0.015625 0.015625 0.03125 0.9375 0.03125 0.046875 0.78125 0.140625 0.015625 0 0.03125 0.953125 0.0625 0 0.890625 0.046875 0.109375 0.0625 0.78125 0.046875 0.015625 0 0.015625 0.96875 0.046875 0 0.890625 0.0625 0.03125 0 0.015625 0.953125 0 0.90625 0.03125 0.0625 1 0 0 0 0.078125 0.890625 0.015625 0.015625 0.90625 0.046875 0.03125 0.015625 0.265625 0.125 0.5 0.109375 0.09375 0.1875 0.015625 0.703125 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Reverse Complement Backward 3 14 0.065312 Original Motif 0.111111 0.746032 0.0634921 0.0793651 0.857143 0.047619 0.047619 0.047619 0.047619 0.857143 0.0793651 0.015873 0.031746 0 0 0.968254 0.031746 0.015873 0.904762 0.047619 0 0 0 1 0.031746 0 0.857143 0.111111 0.396825 0.111111 0.412698 0.0793651 0.031746 0.253968 0.015873 0.698413 0.365079 0 0.634921 0 0.0793651 0.206349 0.047619 0.666667 0.047619 0.936508 0.015873 0 0.952381 0 0.015873 0.031746 0.015873 0.920635 0 0.0634921 0.920635 0 0 0.0793651 0.0634921 0.047619 0.84127 0.047619 0 0 0.015873 0.984127 0.047619 0.015873 0.904762 0.031746 0.015873 0.603175 0.31746 0.0634921 0.396825 0 0.015873 0.587302 0.015873 0.47619 0.428571 0.0793651 0.0634921 0.920635 0 0.015873 0.920635 0.015873 0.047619 0.015873 0.0952381 0.68254 0.0952381 0.126984 0.047619 0.015873 0.0952381 0.84127 Reverse Complement Motif 0.84127 0.015873 0.0952381 0.047619 0.0952381 0.0952381 0.68254 0.126984 0.015873 0.015873 0.047619 0.920635 0.0634921 0 0.920635 0.015873 0.015873 0.428571 0.47619 0.0793651 0.587302 0 0.015873 0.396825 0.015873 0.31746 0.603175 0.0634921 0.047619 0.904762 0.015873 0.031746 0.984127 0 0.015873 0 0.0634921 0.84127 0.047619 0.047619 0.0793651 0 0 0.920635 0.015873 0 0.920635 0.0634921 0.031746 0 0.015873 0.952381 0.047619 0.015873 0.936508 0 0.666667 0.206349 0.047619 0.0793651 0.365079 0.634921 0 0 0.698413 0.253968 0.015873 0.031746 0.396825 0.412698 0.111111 0.0793651 0.031746 0.857143 0 0.111111 1 0 0 0 0.031746 0.904762 0.015873 0.047619 0.968254 0 0 0.031746 0.047619 0.0793651 0.857143 0.015873 0.047619 0.047619 0.047619 0.857143 0.111111 0.0634921 0.746032 0.0793651 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 59 ESR2 Original Motif Original Motif Backward 5 14 0.0658518 Original Motif 0.218487 0.45098 0.176471 0.154062 0.442577 0.142857 0.114846 0.29972 0.521008 0.0420168 0.431373 0.00560224 0.0756303 0 0.770308 0.154062 0.0504202 0.0560224 0.893557 0 0.0364146 0.0532213 0.092437 0.817927 0 1 0 0 0.943978 0.00280112 0 0.0532213 0.137255 0.344538 0.316527 0.201681 0.179272 0.176471 0.417367 0.226891 0.145658 0.170868 0.411765 0.271709 0.0588235 0.092437 0.0672269 0.781513 0.176471 0.070028 0.742297 0.0112045 0.498599 0.277311 0.0532213 0.170868 0.0952381 0.7507 0.00560224 0.148459 0.128852 0.809524 0 0.0616246 0.0756303 0.252101 0 0.672269 0.168067 0.263305 0.380952 0.187675 Reverse Complement Motif 0.168067 0.380952 0.263305 0.187675 0.672269 0.252101 0 0.0756303 0.128852 0 0.809524 0.0616246 0.0952381 0.00560224 0.7507 0.148459 0.170868 0.277311 0.0532213 0.498599 0.176471 0.742297 0.070028 0.0112045 0.781513 0.092437 0.0672269 0.0588235 0.145658 0.411765 0.170868 0.271709 0.179272 0.417367 0.176471 0.226891 0.137255 0.316527 0.344538 0.201681 0.0532213 0.00280112 0 0.943978 0 0 1 0 0.817927 0.0532213 0.092437 0.0364146 0.0504202 0.893557 0.0560224 0 0.0756303 0.770308 0 0.154062 0.00560224 0.0420168 0.431373 0.521008 0.29972 0.142857 0.114846 0.442577 0.218487 0.176471 0.45098 0.154062 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 53 ESR1 Original Motif Reverse Complement Backward 3 14 0.0671359 Original Motif 0.261242 0.256959 0.329764 0.152034 0.228632 0.17094 0.350427 0.25 0.136752 0.369658 0.318376 0.175214 0.176596 0.487234 0.138298 0.197872 0.285106 0.493617 0.1 0.121277 0.651163 0.0591966 0.188161 0.10148 0.0759494 0.0168776 0.816456 0.0907173 0.04 0.0378947 0.884211 0.0378947 0.0694737 0.0863158 0.191579 0.652632 0.00842105 0.829474 0.111579 0.0505263 0.837895 0.0273684 0.0568421 0.0778947 0.122105 0.526316 0.225263 0.126316 0.132632 0.581053 0.111579 0.174737 0.134737 0.543158 0.204211 0.117895 0.0673684 0.04 0.0168421 0.875789 0.0442105 0.0463158 0.896842 0.0126316 0.642105 0.223158 0.0652632 0.0694737 0.0210526 0.917895 0.0252632 0.0357895 0.124211 0.743158 0.00421053 0.128421 0.0547368 0.347368 0.0463158 0.551579 Reverse Complement Motif 0.551579 0.347368 0.0463158 0.0547368 0.124211 0.00421053 0.743158 0.128421 0.0210526 0.0252632 0.917895 0.0357895 0.0694737 0.223158 0.0652632 0.642105 0.0442105 0.896842 0.0463158 0.0126316 0.875789 0.04 0.0168421 0.0673684 0.134737 0.204211 0.543158 0.117895 0.132632 0.111579 0.581053 0.174737 0.122105 0.225263 0.526316 0.126316 0.0778947 0.0273684 0.0568421 0.837895 0.00842105 0.111579 0.829474 0.0505263 0.652632 0.0863158 0.191579 0.0694737 0.04 0.884211 0.0378947 0.0378947 0.0759494 0.816456 0.0168776 0.0907173 0.10148 0.0591966 0.188161 0.651163 0.285106 0.1 0.493617 0.121277 0.176596 0.138298 0.487234 0.197872 0.136752 0.318376 0.369658 0.175214 0.228632 0.350427 0.17094 0.25 0.261242 0.329764 0.256959 0.152034 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 67 TgTGgTGTCACAGTGCTCC Original Motif Reverse Complement Forward 7 13 0.538291 Original Motif 0.111111 0.0833333 0.0555556 0.75 0.125 0.0972222 0.652778 0.125 0.0416667 0.0972222 0.0277778 0.833333 0.0277778 0.0277778 0.791667 0.152778 0.0555556 0.166667 0.652778 0.125 0 0.0416667 0.0138889 0.944444 0.0416667 0 0.888889 0.0694444 0.0277778 0.0277778 0 0.944444 0.0416667 0.944444 0.0138889 0 0.916667 0.0277778 0 0.0555556 0.0694444 0.875 0 0.0555556 0.833333 0.0138889 0.0138889 0.138889 0.0416667 0.0694444 0.819444 0.0694444 0.0277778 0.0277778 0.0277778 0.916667 0.0694444 0.0138889 0.847222 0.0694444 0.0694444 0.777778 0.0277778 0.125 0.0555556 0.0416667 0.0277778 0.875 0.0416667 0.708333 0.125 0.125 0.111111 0.819444 0.0555556 0.0138889 Reverse Complement Motif 0.111111 0.0555556 0.819444 0.0138889 0.0416667 0.125 0.708333 0.125 0.875 0.0416667 0.0277778 0.0555556 0.0694444 0.0277778 0.777778 0.125 0.0694444 0.847222 0.0138889 0.0694444 0.916667 0.0277778 0.0277778 0.0277778 0.0416667 0.819444 0.0694444 0.0694444 0.138889 0.0138889 0.0138889 0.833333 0.0694444 0 0.875 0.0555556 0.0555556 0.0277778 0 0.916667 0.0416667 0.0138889 0.944444 0 0.944444 0.0277778 0 0.0277778 0.0416667 0.888889 0 0.0694444 0.944444 0.0416667 0.0138889 0 0.0555556 0.652778 0.166667 0.125 0.0277778 0.791667 0.0277778 0.152778 0.833333 0.0972222 0.0277778 0.0416667 0.125 0.652778 0.0972222 0.125 0.75 0.0833333 0.0555556 0.111111 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 65 Tcfcp2l1 Reverse Complement Reverse Complement Backward 2 13 0.560622 Original Motif 0.00196754 0.92548 0.0627152 0.00983768 0.069973 0.807513 0.00540142 0.117113 0.594508 0.00514832 0.275803 0.12454 0.0058838 0.0237803 0.967149 0.00318706 0.175477 0.33627 0.0256975 0.462555 0.0983847 0.28928 0.0621635 0.550171 0.173924 0.39726 0.151174 0.277642 0.357213 0.224939 0.252323 0.165526 0.63154 0.0696822 0.190954 0.107824 0.394421 0.0513824 0.310497 0.2437 0.00366928 0.933219 0.0547945 0.00831703 0.0617193 0.812148 0.00293902 0.123194 0.536555 0.00736016 0.305937 0.150147 0.0120393 0.0289926 0.954791 0.0041769 Reverse Complement Motif 0.0120393 0.954791 0.0289926 0.0041769 0.150147 0.00736016 0.305937 0.536555 0.0617193 0.00293902 0.812148 0.123194 0.00366928 0.0547945 0.933219 0.00831703 0.2437 0.0513824 0.310497 0.394421 0.107824 0.0696822 0.190954 0.63154 0.165526 0.224939 0.252323 0.357213 0.173924 0.151174 0.39726 0.277642 0.550171 0.28928 0.0621635 0.0983847 0.462555 0.33627 0.0256975 0.175477 0.0058838 0.967149 0.0237803 0.00318706 0.12454 0.00514832 0.275803 0.594508 0.069973 0.00540142 0.807513 0.117113 0.00196754 0.0627152 0.92548 0.00983768 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # 1 Motif ID 6 Motif Name Motif 6 Original Motif 0 0.857143 0 0.142857 0.904762 0 0 0.095238 0 0.571429 0.428571 0 1 0 0 0 0.047619 0.380952 0.285714 0.285714 0.52381 0.047619 0.238095 0.190476 0.047619 0.809524 0.142857 0 0.47619 0 0 0.52381 0.190476 0.333333 0.47619 0 1 0 0 0 0 0.666667 0.333333 0 1 0 0 0 0 1 0 0 0.857143 0 0 0.142857 Reserve Complement Motif 0.142857 0 0 0.857143 0 0 1 0 0 0 0 1 0 0.333333 0.666667 0 0 0 0 1 0.190476 0.47619 0.333333 0 0.52381 0 0 0.47619 0.047619 0.142857 0.809524 0 0.190476 0.047619 0.238095 0.52381 0.047619 0.285714 0.380952 0.285714 0 0 0 1 0 0.428571 0.571429 0 0.095238 0 0 0.904762 0 0 0.857143 0.142857 ************************************************************************ Best Matches for Motif ID 6 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 92 TFM11 Reverse Complement Reverse Complement Backward 7 14 0.0383879 Original Motif 0 0.769231 0 0.230769 0.730769 0 0.192308 0.0769231 0.346154 0.576923 0.0384615 0.0384615 0.923077 0.0769231 0 0 0.153846 0.769231 0.0769231 0 0.923077 0.0769231 0 0 0 0.807692 0.0769231 0.115385 0.846154 0.153846 0 0 0.115385 0.846154 0.0384615 0 0.807692 0 0 0.192308 0.0384615 0.884615 0 0.0769231 0.692308 0 0.0769231 0.230769 0.0769231 0.538462 0 0.384615 0.461538 0.0384615 0.269231 0.230769 0 0.807692 0.192308 0 0.807692 0.153846 0 0.0384615 0.0769231 0.692308 0 0.230769 0.807692 0 0.192308 0 0.0769231 0.730769 0.115385 0.0769231 0.923077 0 0 0.0769231 Reverse Complement Motif 0.0769231 0 0 0.923077 0.0769231 0.115385 0.730769 0.0769231 0 0 0.192308 0.807692 0.0769231 0 0.692308 0.230769 0.0384615 0.153846 0 0.807692 0 0.192308 0.807692 0 0.230769 0.0384615 0.269231 0.461538 0.0769231 0 0.538462 0.384615 0.230769 0 0.0769231 0.692308 0.0384615 0 0.884615 0.0769231 0.192308 0 0 0.807692 0.115385 0.0384615 0.846154 0 0 0.153846 0 0.846154 0 0.0769231 0.807692 0.115385 0 0.0769231 0 0.923077 0.153846 0.0769231 0.769231 0 0 0.0769231 0 0.923077 0.346154 0.0384615 0.576923 0.0384615 0.0769231 0 0.192308 0.730769 0 0 0.769231 0.230769 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 89 TFM1 Reverse Complement Reverse Complement Backward 5 14 0.0411352 Original Motif 0.107143 0.642857 0 0.25 0.785714 0.0357143 0.0714286 0.107143 0.25 0.714286 0.0357143 0 1 0 0 0 0 0.892857 0.107143 0 0.821429 0.142857 0 0.0357143 0.107143 0.785714 0.0714286 0.0357143 0.857143 0 0 0.142857 0 0.928571 0.0357143 0.0357143 0.785714 0 0.0714286 0.142857 0.142857 0.571429 0 0.285714 0.5 0 0.214286 0.285714 0 0.821429 0.178571 0 0.75 0.178571 0 0.0714286 0.0357143 0.821429 0 0.142857 0.857143 0.0357143 0.107143 0 0.178571 0.642857 0.178571 0 0.964286 0 0.0357143 0 Reverse Complement Motif 0 0 0.0357143 0.964286 0.178571 0.178571 0.642857 0 0 0.0357143 0.107143 0.857143 0.0357143 0 0.821429 0.142857 0.0714286 0.178571 0 0.75 0 0.178571 0.821429 0 0.285714 0 0.214286 0.5 0.142857 0 0.571429 0.285714 0.142857 0 0.0714286 0.785714 0 0.0357143 0.928571 0.0357143 0.142857 0 0 0.857143 0.107143 0.0714286 0.785714 0.0357143 0.0357143 0.142857 0 0.821429 0 0.107143 0.892857 0 0 0 0 1 0.25 0.0357143 0.714286 0 0.107143 0.0357143 0.0714286 0.785714 0.107143 0 0.642857 0.25 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 57 REST Reverse Complement Reverse Complement Backward 3 14 0.0803592 Original Motif 0.132621 0.109365 0.230044 0.52797 0.0363181 0.168441 0.0914214 0.70382 0.0475892 0.855354 0.0313087 0.0657483 0.906367 0.0187266 0.0586767 0.0162297 0.021197 0.0274314 0.945137 0.00623441 0.0760125 0.609346 0.201246 0.113396 0.980697 0.00435866 0.00747198 0.00747198 0.001868 0.987547 0.00747198 0.00311333 0.0217933 0.922167 0.0124533 0.0435866 0.568847 0.125234 0.100935 0.204984 0.136534 0.233791 0.0773067 0.552369 0.0243142 0.00436409 0.966958 0.00436409 0.0124688 0.00311721 0.983167 0.00124688 0.877105 0.069869 0.0212102 0.0318153 0.008125 0.8 0.145625 0.04625 0.98375 0.005625 0.004375 0.00625 0.0263488 0.00815558 0.959849 0.00564617 0.128688 0.632141 0.114878 0.124294 0.229899 0.0194724 0.432161 0.318467 0.133962 0.586792 0.200629 0.0786164 0.112579 0.700629 0.0232704 0.163522 Reverse Complement Motif 0.112579 0.0232704 0.700629 0.163522 0.133962 0.200629 0.586792 0.0786164 0.229899 0.432161 0.0194724 0.318467 0.128688 0.114878 0.632141 0.124294 0.0263488 0.959849 0.00815558 0.00564617 0.00625 0.005625 0.004375 0.98375 0.008125 0.145625 0.8 0.04625 0.0318153 0.069869 0.0212102 0.877105 0.0124688 0.983167 0.00311721 0.00124688 0.0243142 0.966958 0.00436409 0.00436409 0.552369 0.233791 0.0773067 0.136534 0.204984 0.125234 0.100935 0.568847 0.0217933 0.0124533 0.922167 0.0435866 0.001868 0.00747198 0.987547 0.00311333 0.00747198 0.00435866 0.00747198 0.980697 0.0760125 0.201246 0.609346 0.113396 0.021197 0.945137 0.0274314 0.00623441 0.0162297 0.0187266 0.0586767 0.906367 0.0475892 0.0313087 0.855354 0.0657483 0.70382 0.168441 0.0914214 0.0363181 0.52797 0.109365 0.230044 0.132621 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 59 ESR2 Reverse Complement Original Motif Forward 2 14 0.0865284 Original Motif 0.218487 0.45098 0.176471 0.154062 0.442577 0.142857 0.114846 0.29972 0.521008 0.0420168 0.431373 0.00560224 0.0756303 0 0.770308 0.154062 0.0504202 0.0560224 0.893557 0 0.0364146 0.0532213 0.092437 0.817927 0 1 0 0 0.943978 0.00280112 0 0.0532213 0.137255 0.344538 0.316527 0.201681 0.179272 0.176471 0.417367 0.226891 0.145658 0.170868 0.411765 0.271709 0.0588235 0.092437 0.0672269 0.781513 0.176471 0.070028 0.742297 0.0112045 0.498599 0.277311 0.0532213 0.170868 0.0952381 0.7507 0.00560224 0.148459 0.128852 0.809524 0 0.0616246 0.0756303 0.252101 0 0.672269 0.168067 0.263305 0.380952 0.187675 Reverse Complement Motif 0.168067 0.380952 0.263305 0.187675 0.672269 0.252101 0 0.0756303 0.128852 0 0.809524 0.0616246 0.0952381 0.00560224 0.7507 0.148459 0.170868 0.277311 0.0532213 0.498599 0.176471 0.742297 0.070028 0.0112045 0.781513 0.092437 0.0672269 0.0588235 0.145658 0.411765 0.170868 0.271709 0.179272 0.417367 0.176471 0.226891 0.137255 0.316527 0.344538 0.201681 0.0532213 0.00280112 0 0.943978 0 0 1 0 0.817927 0.0532213 0.092437 0.0364146 0.0504202 0.893557 0.0560224 0 0.0756303 0.770308 0 0.154062 0.00560224 0.0420168 0.431373 0.521008 0.29972 0.142857 0.114846 0.442577 0.218487 0.176471 0.45098 0.154062 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 67 TgTGgTGTCACAGTGCTCC Reverse Complement Original Motif Backward 3 14 0.0874787 Original Motif 0.111111 0.0833333 0.0555556 0.75 0.125 0.0972222 0.652778 0.125 0.0416667 0.0972222 0.0277778 0.833333 0.0277778 0.0277778 0.791667 0.152778 0.0555556 0.166667 0.652778 0.125 0 0.0416667 0.0138889 0.944444 0.0416667 0 0.888889 0.0694444 0.0277778 0.0277778 0 0.944444 0.0416667 0.944444 0.0138889 0 0.916667 0.0277778 0 0.0555556 0.0694444 0.875 0 0.0555556 0.833333 0.0138889 0.0138889 0.138889 0.0416667 0.0694444 0.819444 0.0694444 0.0277778 0.0277778 0.0277778 0.916667 0.0694444 0.0138889 0.847222 0.0694444 0.0694444 0.777778 0.0277778 0.125 0.0555556 0.0416667 0.0277778 0.875 0.0416667 0.708333 0.125 0.125 0.111111 0.819444 0.0555556 0.0138889 Reverse Complement Motif 0.111111 0.0555556 0.819444 0.0138889 0.0416667 0.125 0.708333 0.125 0.875 0.0416667 0.0277778 0.0555556 0.0694444 0.0277778 0.777778 0.125 0.0694444 0.847222 0.0138889 0.0694444 0.916667 0.0277778 0.0277778 0.0277778 0.0416667 0.819444 0.0694444 0.0694444 0.138889 0.0138889 0.0138889 0.833333 0.0694444 0 0.875 0.0555556 0.0555556 0.0277778 0 0.916667 0.0416667 0.0138889 0.944444 0 0.944444 0.0277778 0 0.0277778 0.0416667 0.888889 0 0.0694444 0.944444 0.0416667 0.0138889 0 0.0555556 0.652778 0.166667 0.125 0.0277778 0.791667 0.0277778 0.152778 0.833333 0.0972222 0.0277778 0.0416667 0.125 0.652778 0.0972222 0.125 0.75 0.0833333 0.0555556 0.111111 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 94 TFM13 Reverse Complement Original Motif Forward 2 14 0.0913053 Original Motif 0.0714286 0.142857 0 0.785714 0.0714286 0.0714286 0 0.857143 0 0 0 1 0 0.0714286 0.285714 0.642857 0 0.142857 0 0.857143 0 0 0 1 0.0714286 0 0.0714286 0.857143 0.142857 0 0.357143 0.5 0.0714286 0 0 0.928571 0 0.0714286 0 0.928571 0 0 0.357143 0.642857 0 0 0 1 0 0 0.214286 0.785714 0.142857 0 0 0.857143 0.571429 0.0714286 0.214286 0.142857 0.857143 0 0 0.142857 0.142857 0 0.285714 0.571429 0 0.0714286 0.285714 0.642857 0.357143 0.357143 0.0714286 0.214286 0.428571 0 0.0714286 0.5 Reverse Complement Motif 0.5 0 0.0714286 0.428571 0.214286 0.357143 0.0714286 0.357143 0.642857 0.0714286 0.285714 0 0.571429 0 0.285714 0.142857 0.142857 0 0 0.857143 0.142857 0.0714286 0.214286 0.571429 0.857143 0 0 0.142857 0.785714 0 0.214286 0 1 0 0 0 0.642857 0 0.357143 0 0.928571 0.0714286 0 0 0.928571 0 0 0.0714286 0.5 0 0.357143 0.142857 0.857143 0 0.0714286 0.0714286 1 0 0 0 0.857143 0.142857 0 0 0.642857 0.0714286 0.285714 0 1 0 0 0 0.857143 0.0714286 0 0.0714286 0.785714 0.142857 0 0.0714286 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 73 TGGAGCACTGTGACAcCACAGTGg Reverse Complement Reverse Complement Backward 4 14 0.0930634 Original Motif 0.0540541 0.0405405 0.0540541 0.851351 0.0405405 0.0135135 0.824324 0.121622 0.0945946 0.135135 0.756757 0.0135135 0.891892 0 0 0.108108 0.0405405 0.0945946 0.810811 0.0540541 0.0810811 0.797297 0.0540541 0.0675676 0.932432 0.027027 0 0.0405405 0.0540541 0.756757 0.135135 0.0540541 0.108108 0.027027 0.0135135 0.851351 0.108108 0 0.851351 0.0405405 0.0135135 0 0.027027 0.959459 0 0.0135135 0.945946 0.0405405 0.905405 0 0.0675676 0.027027 0.0540541 0.837838 0 0.108108 0.945946 0.0135135 0.0405405 0 0.162162 0.5 0.189189 0.148649 0.108108 0.824324 0 0.0675676 0.945946 0 0.0405405 0.0135135 0.0810811 0.837838 0.027027 0.0540541 0.945946 0 0.0135135 0.0405405 0.0540541 0.0675676 0.783784 0.0945946 0.0540541 0.027027 0 0.918919 0.0405405 0.0135135 0.864865 0.0810811 0.148649 0.121622 0.675676 0.0540541 Reverse Complement Motif 0.148649 0.675676 0.121622 0.0540541 0.0405405 0.864865 0.0135135 0.0810811 0.918919 0.027027 0 0.0540541 0.0540541 0.783784 0.0675676 0.0945946 0.0405405 0 0.0135135 0.945946 0.0810811 0.027027 0.837838 0.0540541 0.0135135 0 0.0405405 0.945946 0.108108 0 0.824324 0.0675676 0.162162 0.189189 0.5 0.148649 0 0.0135135 0.0405405 0.945946 0.0540541 0 0.837838 0.108108 0.027027 0 0.0675676 0.905405 0 0.945946 0.0135135 0.0405405 0.959459 0 0.027027 0.0135135 0.108108 0.851351 0 0.0405405 0.851351 0.027027 0.0135135 0.108108 0.0540541 0.135135 0.756757 0.0540541 0.0405405 0.027027 0 0.932432 0.0810811 0.0540541 0.797297 0.0675676 0.0405405 0.810811 0.0945946 0.0540541 0.108108 0 0 0.891892 0.0945946 0.756757 0.135135 0.0135135 0.0405405 0.824324 0.0135135 0.121622 0.851351 0.0405405 0.0540541 0.0540541 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 4 Motif 4 Original Motif Original Motif Backward 1 14 0.0933886 Original Motif 0.45 0.25 0 0.3 0.8 0 0 0.2 0.85 0 0.15 0 1 0 0 0 0.75 0 0.25 0 0.4 0.3 0.05 0.25 0.85 0.1 0 0.05 0.85 0.15 0 0 1 0 0 0 0.5 0.1 0.4 0 0.35 0.65 0 0 0.9 0 0.05 0.05 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 0.05 0 0.05 0.9 0.35 0 0.65 0 0 0.1 0.4 0.5 0 0 0 1 0 0.15 0 0.85 0.05 0.1 0 0.85 0.25 0.3 0.05 0.4 0 0 0.25 0.75 0 0 0 1 0 0 0.15 0.85 0.2 0 0 0.8 0.3 0.25 0 0.45 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 91 TFM3 Reverse Complement Original Motif Forward 1 14 0.0935906 Original Motif 0.0625 0.0625 0.3125 0.5625 0.125 0.0625 0 0.8125 0 0 0.0625 0.9375 0 0 0.1875 0.8125 0 0 0.125 0.875 0 0.25 0 0.75 0 0 0.125 0.875 0.1875 0 0.4375 0.375 0 0 0.125 0.875 0 0.125 0 0.875 0 0.0625 0 0.9375 0.125 0 0 0.875 0.125 0.0625 0 0.8125 0 0 0.25 0.75 0.25 0 0.375 0.375 0.9375 0.0625 0 0 0.9375 0 0 0.0625 0 0.3125 0.4375 0.25 Reverse Complement Motif 0 0.4375 0.3125 0.25 0.0625 0 0 0.9375 0 0.0625 0 0.9375 0.25 0.375 0 0.375 0.75 0 0.25 0 0.8125 0.0625 0 0.125 0.875 0 0 0.125 0.9375 0.0625 0 0 0.875 0.125 0 0 0.875 0 0.125 0 0.1875 0.4375 0 0.375 0.875 0 0.125 0 0.75 0.25 0 0 0.875 0 0.125 0 0.8125 0 0.1875 0 0.9375 0 0.0625 0 0.8125 0.0625 0 0.125 0.5625 0.0625 0.3125 0.0625 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 77 AgTGCTCCACTGTGgTGTCACAgT Original Motif Reverse Complement Backward 1 14 0.0939701 Original Motif 0.690141 0.126761 0.0422535 0.140845 0.169014 0.0985915 0.676056 0.056338 0.0422535 0.028169 0.028169 0.901408 0.056338 0 0.774648 0.169014 0.0422535 0.887324 0.0422535 0.028169 0 0.0140845 0 0.985915 0.056338 0.830986 0.0422535 0.0704225 0.028169 0.957746 0.0140845 0 0.957746 0 0.0140845 0.028169 0.084507 0.84507 0.0140845 0.056338 0.028169 0.0140845 0 0.957746 0.140845 0.028169 0.802817 0.028169 0.0140845 0.0140845 0.0140845 0.957746 0.0140845 0 0.929577 0.056338 0.056338 0.15493 0.619718 0.169014 0.0140845 0.028169 0 0.957746 0.056338 0.0140845 0.873239 0.056338 0.0140845 0 0 0.985915 0.0422535 0.929577 0 0.028169 0.957746 0.028169 0 0.0140845 0.028169 0.84507 0.028169 0.0985915 0.873239 0.0140845 0.0422535 0.0704225 0.0985915 0.15493 0.56338 0.183099 0.0704225 0.0140845 0.112676 0.802817 Reverse Complement Motif 0.802817 0.0140845 0.112676 0.0704225 0.0985915 0.56338 0.15493 0.183099 0.0704225 0.0140845 0.0422535 0.873239 0.028169 0.028169 0.84507 0.0985915 0.0140845 0.028169 0 0.957746 0.0422535 0 0.929577 0.028169 0.985915 0 0 0.0140845 0.056338 0.873239 0.0140845 0.056338 0.957746 0.028169 0 0.0140845 0.056338 0.619718 0.15493 0.169014 0.0140845 0.929577 0 0.056338 0.957746 0.0140845 0.0140845 0.0140845 0.140845 0.802817 0.028169 0.028169 0.957746 0.0140845 0 0.028169 0.084507 0.0140845 0.84507 0.056338 0.028169 0 0.0140845 0.957746 0.028169 0.0140845 0.957746 0 0.056338 0.0422535 0.830986 0.0704225 0.985915 0.0140845 0 0 0.0422535 0.0422535 0.887324 0.028169 0.056338 0.774648 0 0.169014 0.901408 0.028169 0.028169 0.0422535 0.169014 0.676056 0.0985915 0.056338 0.140845 0.126761 0.0422535 0.690141 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # 1 Motif ID 7 Motif Name Motif 7 Original Motif 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0.5 0.5 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 1 Reserve Complement Motif 1 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 1 0 0 0.5 0 0.5 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 ************************************************************************ Best Matches for Motif ID 7 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 25 Motif 25 Original Motif Reverse Complement Backward 1 11 0.0795455 Original Motif 1 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 1 Reverse Complement Motif 1 0 0 0 1 0 0 0 0 0 0 1 0 1 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 13 Motif 13 Original Motif Reverse Complement Forward 1 11 0.0795455 Original Motif 1 0 0 0 1 0 0 0 0.5 0 0 0.5 1 0 0 0 0 0 0 1 0.5 0 0.5 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 Reverse Complement Motif 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0.5 0.5 1 0 0 0 0 0 0 1 0.5 0 0 0.5 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 45 Motif 45 Reverse Complement Original Motif Backward 3 11 0.0909091 Original Motif 0 0 0 1 1 0 0 0 1 0 0 0 0 0.5 0.5 0 0 0 0 1 0 1 0 0 0 0 0 1 0.5 0 0 0.5 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0.5 0 0 0.5 1 0 0 0 0 0 1 0 1 0 0 0 0 0.5 0.5 0 0 0 0 1 0 0 0 1 1 0 0 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 15 Motif 15 Reverse Complement Reverse Complement Forward 2 11 0.102273 Original Motif 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0.5 0 0.5 0 0 0 0 1 0.5 0.5 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 1 1 0 0 0 Reverse Complement Motif 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0.5 0 0.5 1 0 0 0 0 0 0.5 0.5 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 12 Motif 12 Reverse Complement Reverse Complement Forward 1 11 0.102273 Original Motif 1 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 Reverse Complement Motif 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 33 Motif 33 Original Motif Reverse Complement Backward 4 11 0.102273 Original Motif 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0.5 0 0.5 0 0 0 1 0 0 0 1 0 0 0 1 0.5 0 0 0.5 1 0 0 0 Reverse Complement Motif 0 0 0 1 0.5 0 0 0.5 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0.5 0.5 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 9 Motif 9 Original Motif Reverse Complement Backward 1 11 0.102273 Original Motif 1 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 1 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 2 49 Motif 49 Reverse Complement Reverse Complement Backward 4 11 0.102273 Original Motif 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 Reverse Complement Motif 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 11 Motif 11 Original Motif Original Motif Forward 1 11 0.113636 Original Motif 1 0 0 0 1 0 0 0 0.5 0.5 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 0.5 0.5 0 0 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 0 0.5 0 0.5 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0.5 0 0.5 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 10 Motif 10 Original Motif Original Motif Forward 1 11 0.113636 Original Motif 1 0 0 0 1 0 0 0 1 0 0 0 0.5 0.5 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 Reverse Complement Motif 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0.5 0 0.5 0 0 0 1 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # 1 Motif ID 8 Motif Name Motif 8 Original Motif 0 0 0 1 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0.5 0.5 0 0 1 0 0 0 0 0 1 0 0 0 1 Reserve Complement Motif 1 0 0 0 1 0 0 0 0 0 1 0 0 0.5 0.5 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 1 0 0 1 0 0 0 ************************************************************************ Best Matches for Motif ID 8 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 9 Motif 9 Original Motif Reverse Complement Backward 2 11 0.0681818 Original Motif 1 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 1 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 33 Motif 33 Reverse Complement Original Motif Backward 1 11 0.0909091 Original Motif 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0.5 0 0.5 0 0 0 1 0 0 0 1 0 0 0 1 0.5 0 0 0.5 1 0 0 0 Reverse Complement Motif 0 0 0 1 0.5 0 0 0.5 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0.5 0.5 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 11 Motif 11 Original Motif Reverse Complement Backward 1 11 0.102273 Original Motif 1 0 0 0 1 0 0 0 0.5 0.5 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 0.5 0.5 0 0 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 0 0.5 0 0.5 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0.5 0 0.5 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 10 Motif 10 Original Motif Reverse Complement Backward 1 11 0.102273 Original Motif 1 0 0 0 1 0 0 0 1 0 0 0 0.5 0.5 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 Reverse Complement Motif 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0.5 0 0.5 0 0 0 1 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 73 TGGAGCACTGTGACAcCACAGTGg Reverse Complement Original Motif Backward 12 11 0.111179 Original Motif 0.0540541 0.0405405 0.0540541 0.851351 0.0405405 0.0135135 0.824324 0.121622 0.0945946 0.135135 0.756757 0.0135135 0.891892 0 0 0.108108 0.0405405 0.0945946 0.810811 0.0540541 0.0810811 0.797297 0.0540541 0.0675676 0.932432 0.027027 0 0.0405405 0.0540541 0.756757 0.135135 0.0540541 0.108108 0.027027 0.0135135 0.851351 0.108108 0 0.851351 0.0405405 0.0135135 0 0.027027 0.959459 0 0.0135135 0.945946 0.0405405 0.905405 0 0.0675676 0.027027 0.0540541 0.837838 0 0.108108 0.945946 0.0135135 0.0405405 0 0.162162 0.5 0.189189 0.148649 0.108108 0.824324 0 0.0675676 0.945946 0 0.0405405 0.0135135 0.0810811 0.837838 0.027027 0.0540541 0.945946 0 0.0135135 0.0405405 0.0540541 0.0675676 0.783784 0.0945946 0.0540541 0.027027 0 0.918919 0.0405405 0.0135135 0.864865 0.0810811 0.148649 0.121622 0.675676 0.0540541 Reverse Complement Motif 0.148649 0.675676 0.121622 0.0540541 0.0405405 0.864865 0.0135135 0.0810811 0.918919 0.027027 0 0.0540541 0.0540541 0.783784 0.0675676 0.0945946 0.0405405 0 0.0135135 0.945946 0.0810811 0.027027 0.837838 0.0540541 0.0135135 0 0.0405405 0.945946 0.108108 0 0.824324 0.0675676 0.162162 0.189189 0.5 0.148649 0 0.0135135 0.0405405 0.945946 0.0540541 0 0.837838 0.108108 0.027027 0 0.0675676 0.905405 0 0.945946 0.0135135 0.0405405 0.959459 0 0.027027 0.0135135 0.108108 0.851351 0 0.0405405 0.851351 0.027027 0.0135135 0.108108 0.0540541 0.135135 0.756757 0.0540541 0.0405405 0.027027 0 0.932432 0.0810811 0.0540541 0.797297 0.0675676 0.0405405 0.810811 0.0945946 0.0540541 0.108108 0 0 0.891892 0.0945946 0.756757 0.135135 0.0135135 0.0405405 0.824324 0.0135135 0.121622 0.851351 0.0405405 0.0540541 0.0540541 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 67 TgTGgTGTCACAGTGCTCC Original Motif Original Motif Forward 8 11 0.113005 Original Motif 0.111111 0.0833333 0.0555556 0.75 0.125 0.0972222 0.652778 0.125 0.0416667 0.0972222 0.0277778 0.833333 0.0277778 0.0277778 0.791667 0.152778 0.0555556 0.166667 0.652778 0.125 0 0.0416667 0.0138889 0.944444 0.0416667 0 0.888889 0.0694444 0.0277778 0.0277778 0 0.944444 0.0416667 0.944444 0.0138889 0 0.916667 0.0277778 0 0.0555556 0.0694444 0.875 0 0.0555556 0.833333 0.0138889 0.0138889 0.138889 0.0416667 0.0694444 0.819444 0.0694444 0.0277778 0.0277778 0.0277778 0.916667 0.0694444 0.0138889 0.847222 0.0694444 0.0694444 0.777778 0.0277778 0.125 0.0555556 0.0416667 0.0277778 0.875 0.0416667 0.708333 0.125 0.125 0.111111 0.819444 0.0555556 0.0138889 Reverse Complement Motif 0.111111 0.0555556 0.819444 0.0138889 0.0416667 0.125 0.708333 0.125 0.875 0.0416667 0.0277778 0.0555556 0.0694444 0.0277778 0.777778 0.125 0.0694444 0.847222 0.0138889 0.0694444 0.916667 0.0277778 0.0277778 0.0277778 0.0416667 0.819444 0.0694444 0.0694444 0.138889 0.0138889 0.0138889 0.833333 0.0694444 0 0.875 0.0555556 0.0555556 0.0277778 0 0.916667 0.0416667 0.0138889 0.944444 0 0.944444 0.0277778 0 0.0277778 0.0416667 0.888889 0 0.0694444 0.944444 0.0416667 0.0138889 0 0.0555556 0.652778 0.166667 0.125 0.0277778 0.791667 0.0277778 0.152778 0.833333 0.0972222 0.0277778 0.0416667 0.125 0.652778 0.0972222 0.125 0.75 0.0833333 0.0555556 0.111111 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 45 Motif 45 Original Motif Reverse Complement Backward 2 11 0.113636 Original Motif 0 0 0 1 1 0 0 0 1 0 0 0 0 0.5 0.5 0 0 0 0 1 0 1 0 0 0 0 0 1 0.5 0 0 0.5 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0.5 0 0 0.5 1 0 0 0 0 0 1 0 1 0 0 0 0 0.5 0.5 0 0 0 0 1 0 0 0 1 1 0 0 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 43 Motif 43 Original Motif Reverse Complement Backward 1 11 0.113636 Original Motif 1 0 0 0 1 0 0 0 0 0 0.5 0.5 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 1 0 0 0 0.5 0 0.5 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 46 Motif 46 Original Motif Reverse Complement Backward 2 11 0.113636 Original Motif 1 0 0 0 0 0 0 1 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 1 0 0 0.5 0 0.5 1 0 0 0 0 0 0 1 1 0 0 0 Reverse Complement Motif 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0.5 0.5 0 1 0 0 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 24 Motif 24 Original Motif Reverse Complement Forward 1 11 0.125 Original Motif 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0.5 0 0 0.5 0 1 0 0 1 0 0 0 0 0 0 1 0.5 0 0 0.5 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 0.5 0 0 0.5 1 0 0 0 0 0 0 1 0 0 1 0 0.5 0 0 0.5 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # 1 Motif ID 9 Motif Name Motif 9 Original Motif 1 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 1 0 0 1 0 0 0 Reserve Complement Motif 0 0 0 1 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 1 ************************************************************************ Best Matches for Motif ID 9 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 11 Motif 11 Original Motif Original Motif Backward 1 12 0.0729167 Original Motif 1 0 0 0 1 0 0 0 0.5 0.5 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 0.5 0.5 0 0 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 0 0.5 0 0.5 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0.5 0 0.5 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 45 Motif 45 Original Motif Original Motif Forward 3 12 0.09375 Original Motif 0 0 0 1 1 0 0 0 1 0 0 0 0 0.5 0.5 0 0 0 0 1 0 1 0 0 0 0 0 1 0.5 0 0 0.5 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0.5 0 0 0.5 1 0 0 0 0 0 1 0 1 0 0 0 0 0.5 0.5 0 0 0 0 1 0 0 0 1 1 0 0 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 33 Motif 33 Original Motif Reverse Complement Backward 2 12 0.104167 Original Motif 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0.5 0 0.5 0 0 0 1 0 0 0 1 0 0 0 1 0.5 0 0 0.5 1 0 0 0 Reverse Complement Motif 0 0 0 1 0.5 0 0 0.5 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0.5 0.5 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 77 AgTGCTCCACTGTGgTGTCACAgT Original Motif Original Motif Forward 9 12 0.120305 Original Motif 0.690141 0.126761 0.0422535 0.140845 0.169014 0.0985915 0.676056 0.056338 0.0422535 0.028169 0.028169 0.901408 0.056338 0 0.774648 0.169014 0.0422535 0.887324 0.0422535 0.028169 0 0.0140845 0 0.985915 0.056338 0.830986 0.0422535 0.0704225 0.028169 0.957746 0.0140845 0 0.957746 0 0.0140845 0.028169 0.084507 0.84507 0.0140845 0.056338 0.028169 0.0140845 0 0.957746 0.140845 0.028169 0.802817 0.028169 0.0140845 0.0140845 0.0140845 0.957746 0.0140845 0 0.929577 0.056338 0.056338 0.15493 0.619718 0.169014 0.0140845 0.028169 0 0.957746 0.056338 0.0140845 0.873239 0.056338 0.0140845 0 0 0.985915 0.0422535 0.929577 0 0.028169 0.957746 0.028169 0 0.0140845 0.028169 0.84507 0.028169 0.0985915 0.873239 0.0140845 0.0422535 0.0704225 0.0985915 0.15493 0.56338 0.183099 0.0704225 0.0140845 0.112676 0.802817 Reverse Complement Motif 0.802817 0.0140845 0.112676 0.0704225 0.0985915 0.56338 0.15493 0.183099 0.0704225 0.0140845 0.0422535 0.873239 0.028169 0.028169 0.84507 0.0985915 0.0140845 0.028169 0 0.957746 0.0422535 0 0.929577 0.028169 0.985915 0 0 0.0140845 0.056338 0.873239 0.0140845 0.056338 0.957746 0.028169 0 0.0140845 0.056338 0.619718 0.15493 0.169014 0.0140845 0.929577 0 0.056338 0.957746 0.0140845 0.0140845 0.0140845 0.140845 0.802817 0.028169 0.028169 0.957746 0.0140845 0 0.028169 0.084507 0.0140845 0.84507 0.056338 0.028169 0 0.0140845 0.957746 0.028169 0.0140845 0.957746 0 0.056338 0.0422535 0.830986 0.0704225 0.985915 0.0140845 0 0 0.0422535 0.0422535 0.887324 0.028169 0.056338 0.774648 0 0.169014 0.901408 0.028169 0.028169 0.0422535 0.169014 0.676056 0.0985915 0.056338 0.140845 0.126761 0.0422535 0.690141 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 89 TFM1 Original Motif Original Motif Backward 5 12 0.12128 Original Motif 0.107143 0.642857 0 0.25 0.785714 0.0357143 0.0714286 0.107143 0.25 0.714286 0.0357143 0 1 0 0 0 0 0.892857 0.107143 0 0.821429 0.142857 0 0.0357143 0.107143 0.785714 0.0714286 0.0357143 0.857143 0 0 0.142857 0 0.928571 0.0357143 0.0357143 0.785714 0 0.0714286 0.142857 0.142857 0.571429 0 0.285714 0.5 0 0.214286 0.285714 0 0.821429 0.178571 0 0.75 0.178571 0 0.0714286 0.0357143 0.821429 0 0.142857 0.857143 0.0357143 0.107143 0 0.178571 0.642857 0.178571 0 0.964286 0 0.0357143 0 Reverse Complement Motif 0 0 0.0357143 0.964286 0.178571 0.178571 0.642857 0 0 0.0357143 0.107143 0.857143 0.0357143 0 0.821429 0.142857 0.0714286 0.178571 0 0.75 0 0.178571 0.821429 0 0.285714 0 0.214286 0.5 0.142857 0 0.571429 0.285714 0.142857 0 0.0714286 0.785714 0 0.0357143 0.928571 0.0357143 0.142857 0 0 0.857143 0.107143 0.0714286 0.785714 0.0357143 0.0357143 0.142857 0 0.821429 0 0.107143 0.892857 0 0 0 0 1 0.25 0.0357143 0.714286 0 0.107143 0.0357143 0.0714286 0.785714 0.107143 0 0.642857 0.25 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 71 AmTGTGACACCACAGT Reverse Complement Original Motif Backward 1 12 0.12207 Original Motif 0.703125 0.1875 0.015625 0.09375 0.265625 0.5 0.125 0.109375 0.015625 0.046875 0.03125 0.90625 0.078125 0.015625 0.890625 0.015625 0 0 0 1 0 0.03125 0.90625 0.0625 0.953125 0 0.015625 0.03125 0.046875 0.890625 0 0.0625 0.96875 0 0.015625 0.015625 0.109375 0.78125 0.0625 0.046875 0.0625 0.890625 0 0.046875 0.953125 0 0.03125 0.015625 0.03125 0.78125 0.046875 0.140625 0.9375 0.015625 0.03125 0.015625 0.09375 0.078125 0.734375 0.09375 0.03125 0.078125 0 0.890625 Reverse Complement Motif 0.890625 0.078125 0 0.03125 0.09375 0.734375 0.078125 0.09375 0.015625 0.015625 0.03125 0.9375 0.03125 0.046875 0.78125 0.140625 0.015625 0 0.03125 0.953125 0.0625 0 0.890625 0.046875 0.109375 0.0625 0.78125 0.046875 0.015625 0 0.015625 0.96875 0.046875 0 0.890625 0.0625 0.03125 0 0.015625 0.953125 0 0.90625 0.03125 0.0625 1 0 0 0 0.078125 0.890625 0.015625 0.015625 0.90625 0.046875 0.03125 0.015625 0.265625 0.125 0.5 0.109375 0.09375 0.1875 0.015625 0.703125 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 73 TGGAGCACTGTGACAcCACAGTGg Original Motif Reverse Complement Forward 3 12 0.122466 Original Motif 0.0540541 0.0405405 0.0540541 0.851351 0.0405405 0.0135135 0.824324 0.121622 0.0945946 0.135135 0.756757 0.0135135 0.891892 0 0 0.108108 0.0405405 0.0945946 0.810811 0.0540541 0.0810811 0.797297 0.0540541 0.0675676 0.932432 0.027027 0 0.0405405 0.0540541 0.756757 0.135135 0.0540541 0.108108 0.027027 0.0135135 0.851351 0.108108 0 0.851351 0.0405405 0.0135135 0 0.027027 0.959459 0 0.0135135 0.945946 0.0405405 0.905405 0 0.0675676 0.027027 0.0540541 0.837838 0 0.108108 0.945946 0.0135135 0.0405405 0 0.162162 0.5 0.189189 0.148649 0.108108 0.824324 0 0.0675676 0.945946 0 0.0405405 0.0135135 0.0810811 0.837838 0.027027 0.0540541 0.945946 0 0.0135135 0.0405405 0.0540541 0.0675676 0.783784 0.0945946 0.0540541 0.027027 0 0.918919 0.0405405 0.0135135 0.864865 0.0810811 0.148649 0.121622 0.675676 0.0540541 Reverse Complement Motif 0.148649 0.675676 0.121622 0.0540541 0.0405405 0.864865 0.0135135 0.0810811 0.918919 0.027027 0 0.0540541 0.0540541 0.783784 0.0675676 0.0945946 0.0405405 0 0.0135135 0.945946 0.0810811 0.027027 0.837838 0.0540541 0.0135135 0 0.0405405 0.945946 0.108108 0 0.824324 0.0675676 0.162162 0.189189 0.5 0.148649 0 0.0135135 0.0405405 0.945946 0.0540541 0 0.837838 0.108108 0.027027 0 0.0675676 0.905405 0 0.945946 0.0135135 0.0405405 0.959459 0 0.027027 0.0135135 0.108108 0.851351 0 0.0405405 0.851351 0.027027 0.0135135 0.108108 0.0540541 0.135135 0.756757 0.0540541 0.0405405 0.027027 0 0.932432 0.0810811 0.0540541 0.797297 0.0675676 0.0405405 0.810811 0.0945946 0.0540541 0.108108 0 0 0.891892 0.0945946 0.756757 0.135135 0.0135135 0.0405405 0.824324 0.0135135 0.121622 0.851351 0.0405405 0.0540541 0.0540541 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 92 TFM11 Original Motif Original Motif Backward 5 12 0.123397 Original Motif 0 0.769231 0 0.230769 0.730769 0 0.192308 0.0769231 0.346154 0.576923 0.0384615 0.0384615 0.923077 0.0769231 0 0 0.153846 0.769231 0.0769231 0 0.923077 0.0769231 0 0 0 0.807692 0.0769231 0.115385 0.846154 0.153846 0 0 0.115385 0.846154 0.0384615 0 0.807692 0 0 0.192308 0.0384615 0.884615 0 0.0769231 0.692308 0 0.0769231 0.230769 0.0769231 0.538462 0 0.384615 0.461538 0.0384615 0.269231 0.230769 0 0.807692 0.192308 0 0.807692 0.153846 0 0.0384615 0.0769231 0.692308 0 0.230769 0.807692 0 0.192308 0 0.0769231 0.730769 0.115385 0.0769231 0.923077 0 0 0.0769231 Reverse Complement Motif 0.0769231 0 0 0.923077 0.0769231 0.115385 0.730769 0.0769231 0 0 0.192308 0.807692 0.0769231 0 0.692308 0.230769 0.0384615 0.153846 0 0.807692 0 0.192308 0.807692 0 0.230769 0.0384615 0.269231 0.461538 0.0769231 0 0.538462 0.384615 0.230769 0 0.0769231 0.692308 0.0384615 0 0.884615 0.0769231 0.192308 0 0 0.807692 0.115385 0.0384615 0.846154 0 0 0.153846 0 0.846154 0 0.0769231 0.807692 0.115385 0 0.0769231 0 0.923077 0.153846 0.0769231 0.769231 0 0 0.0769231 0 0.923077 0.346154 0.0384615 0.576923 0.0384615 0.0769231 0 0.192308 0.730769 0 0 0.769231 0.230769 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 72 CACTGTGrYrtCACAGTGswsCAcT Reverse Complement Reverse Complement Backward 2 12 0.124008 Original Motif 0.111111 0.746032 0.0634921 0.0793651 0.857143 0.047619 0.047619 0.047619 0.047619 0.857143 0.0793651 0.015873 0.031746 0 0 0.968254 0.031746 0.015873 0.904762 0.047619 0 0 0 1 0.031746 0 0.857143 0.111111 0.396825 0.111111 0.412698 0.0793651 0.031746 0.253968 0.015873 0.698413 0.365079 0 0.634921 0 0.0793651 0.206349 0.047619 0.666667 0.047619 0.936508 0.015873 0 0.952381 0 0.015873 0.031746 0.015873 0.920635 0 0.0634921 0.920635 0 0 0.0793651 0.0634921 0.047619 0.84127 0.047619 0 0 0.015873 0.984127 0.047619 0.015873 0.904762 0.031746 0.015873 0.603175 0.31746 0.0634921 0.396825 0 0.015873 0.587302 0.015873 0.47619 0.428571 0.0793651 0.0634921 0.920635 0 0.015873 0.920635 0.015873 0.047619 0.015873 0.0952381 0.68254 0.0952381 0.126984 0.047619 0.015873 0.0952381 0.84127 Reverse Complement Motif 0.84127 0.015873 0.0952381 0.047619 0.0952381 0.0952381 0.68254 0.126984 0.015873 0.015873 0.047619 0.920635 0.0634921 0 0.920635 0.015873 0.015873 0.428571 0.47619 0.0793651 0.587302 0 0.015873 0.396825 0.015873 0.31746 0.603175 0.0634921 0.047619 0.904762 0.015873 0.031746 0.984127 0 0.015873 0 0.0634921 0.84127 0.047619 0.047619 0.0793651 0 0 0.920635 0.015873 0 0.920635 0.0634921 0.031746 0 0.015873 0.952381 0.047619 0.015873 0.936508 0 0.666667 0.206349 0.047619 0.0793651 0.365079 0.634921 0 0 0.698413 0.253968 0.015873 0.031746 0.396825 0.412698 0.111111 0.0793651 0.031746 0.857143 0 0.111111 1 0 0 0 0.031746 0.904762 0.015873 0.047619 0.968254 0 0 0.031746 0.047619 0.0793651 0.857143 0.015873 0.047619 0.047619 0.047619 0.857143 0.111111 0.0634921 0.746032 0.0793651 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 2 49 Motif 49 Original Motif Reverse Complement Backward 3 12 0.125 Original Motif 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 Reverse Complement Motif 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # 1 Motif ID 10 Motif Name Motif 10 Original Motif 1 0 0 0 1 0 0 0 1 0 0 0 0.5 0.5 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 Reserve Complement Motif 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0.5 0 0.5 0 0 0 1 0 0 0 1 0 0 0 1 ************************************************************************ Best Matches for Motif ID 10 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 13 Motif 13 Original Motif Original Motif Forward 1 11 0.0700758 Original Motif 1 0 0 0 1 0 0 0 0.5 0 0 0.5 1 0 0 0 0 0 0 1 0.5 0 0.5 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 Reverse Complement Motif 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0.5 0.5 1 0 0 0 0 0 0 1 0.5 0 0 0.5 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 45 Motif 45 Reverse Complement Original Motif Backward 4 11 0.0700758 Original Motif 0 0 0 1 1 0 0 0 1 0 0 0 0 0.5 0.5 0 0 0 0 1 0 1 0 0 0 0 0 1 0.5 0 0 0.5 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0.5 0 0 0.5 1 0 0 0 0 0 1 0 1 0 0 0 0 0.5 0.5 0 0 0 0 1 0 0 0 1 1 0 0 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 9 Motif 9 Reverse Complement Original Motif Backward 1 11 0.0814394 Original Motif 1 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 1 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 25 Motif 25 Original Motif Original Motif Forward 1 11 0.0814394 Original Motif 1 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 1 Reverse Complement Motif 1 0 0 0 1 0 0 0 0 0 0 1 0 1 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 8 Motif 8 Original Motif Reverse Complement Forward 1 11 0.0814394 Original Motif 0 0 0 1 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0.5 0.5 0 0 1 0 0 0 0 0 1 0 0 0 1 Reverse Complement Motif 1 0 0 0 1 0 0 0 0 0 1 0 0 0.5 0.5 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 1 0 0 1 0 0 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 33 Motif 33 Reverse Complement Original Motif Forward 2 11 0.092803 Original Motif 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0.5 0 0.5 0 0 0 1 0 0 0 1 0 0 0 1 0.5 0 0 0.5 1 0 0 0 Reverse Complement Motif 0 0 0 1 0.5 0 0 0.5 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0.5 0.5 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 12 Motif 12 Original Motif Reverse Complement Forward 1 11 0.092803 Original Motif 1 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 Reverse Complement Motif 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 29 Motif 29 Original Motif Original Motif Backward 1 11 0.092803 Original Motif 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 1 1 0 0 0 Reverse Complement Motif 0 0 0 1 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 2 49 Motif 49 Reverse Complement Original Motif Backward 1 11 0.092803 Original Motif 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 Reverse Complement Motif 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 7 Motif 7 Original Motif Original Motif Forward 1 11 0.092803 Original Motif 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0.5 0.5 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 1 Reverse Complement Motif 1 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 1 0 0 0.5 0 0.5 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # 1 Motif ID 11 Motif Name Motif 11 Original Motif 1 0 0 0 1 0 0 0 0.5 0.5 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 0.5 0.5 0 0 1 0 0 0 1 0 0 0 Reserve Complement Motif 0 0 0 1 0 0 0 1 0 0.5 0 0.5 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0.5 0 0.5 0 0 0 1 0 0 0 1 ************************************************************************ Best Matches for Motif ID 11 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 9 Motif 9 Original Motif Original Motif Forward 1 12 0.0479167 Original Motif 1 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 1 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 33 Motif 33 Reverse Complement Original Motif Backward 3 12 0.06875 Original Motif 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0.5 0 0.5 0 0 0 1 0 0 0 1 0 0 0 1 0.5 0 0 0.5 1 0 0 0 Reverse Complement Motif 0 0 0 1 0.5 0 0 0.5 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0.5 0.5 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 45 Motif 45 Original Motif Original Motif Forward 3 12 0.0791667 Original Motif 0 0 0 1 1 0 0 0 1 0 0 0 0 0.5 0.5 0 0 0 0 1 0 1 0 0 0 0 0 1 0.5 0 0 0.5 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0.5 0 0 0.5 1 0 0 0 0 0 1 0 1 0 0 0 0 0.5 0.5 0 0 0 0 1 0 0 0 1 1 0 0 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 91 TFM3 Reverse Complement Reverse Complement Forward 2 12 0.0830729 Original Motif 0.0625 0.0625 0.3125 0.5625 0.125 0.0625 0 0.8125 0 0 0.0625 0.9375 0 0 0.1875 0.8125 0 0 0.125 0.875 0 0.25 0 0.75 0 0 0.125 0.875 0.1875 0 0.4375 0.375 0 0 0.125 0.875 0 0.125 0 0.875 0 0.0625 0 0.9375 0.125 0 0 0.875 0.125 0.0625 0 0.8125 0 0 0.25 0.75 0.25 0 0.375 0.375 0.9375 0.0625 0 0 0.9375 0 0 0.0625 0 0.3125 0.4375 0.25 Reverse Complement Motif 0 0.4375 0.3125 0.25 0.0625 0 0 0.9375 0 0.0625 0 0.9375 0.25 0.375 0 0.375 0.75 0 0.25 0 0.8125 0.0625 0 0.125 0.875 0 0 0.125 0.9375 0.0625 0 0 0.875 0.125 0 0 0.875 0 0.125 0 0.1875 0.4375 0 0.375 0.875 0 0.125 0 0.75 0.25 0 0 0.875 0 0.125 0 0.8125 0 0.1875 0 0.9375 0 0.0625 0 0.8125 0.0625 0 0.125 0.5625 0.0625 0.3125 0.0625 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 94 TFM13 Original Motif Reverse Complement Forward 8 12 0.0970238 Original Motif 0.0714286 0.142857 0 0.785714 0.0714286 0.0714286 0 0.857143 0 0 0 1 0 0.0714286 0.285714 0.642857 0 0.142857 0 0.857143 0 0 0 1 0.0714286 0 0.0714286 0.857143 0.142857 0 0.357143 0.5 0.0714286 0 0 0.928571 0 0.0714286 0 0.928571 0 0 0.357143 0.642857 0 0 0 1 0 0 0.214286 0.785714 0.142857 0 0 0.857143 0.571429 0.0714286 0.214286 0.142857 0.857143 0 0 0.142857 0.142857 0 0.285714 0.571429 0 0.0714286 0.285714 0.642857 0.357143 0.357143 0.0714286 0.214286 0.428571 0 0.0714286 0.5 Reverse Complement Motif 0.5 0 0.0714286 0.428571 0.214286 0.357143 0.0714286 0.357143 0.642857 0.0714286 0.285714 0 0.571429 0 0.285714 0.142857 0.142857 0 0 0.857143 0.142857 0.0714286 0.214286 0.571429 0.857143 0 0 0.142857 0.785714 0 0.214286 0 1 0 0 0 0.642857 0 0.357143 0 0.928571 0.0714286 0 0 0.928571 0 0 0.0714286 0.5 0 0.357143 0.142857 0.857143 0 0.0714286 0.0714286 1 0 0 0 0.857143 0.142857 0 0 0.642857 0.0714286 0.285714 0 1 0 0 0 0.857143 0.0714286 0 0.0714286 0.785714 0.142857 0 0.0714286 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 60 NR1H2RXRA Reverse Complement Original Motif Backward 2 12 0.0983333 Original Motif 0.68 0.2 0 0.12 0.68 0.04 0.2 0.08 0.8 0 0.2 0 0 0 1 0 0 0 0.96 0.04 0 0 0 1 0 1 0 0 1 0 0 0 0.96 0 0 0.04 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 1 0 0 1 0 0 0 0.8 0.04 0.08 0.08 0 0.6 0.24 0.16 Reverse Complement Motif 0 0.24 0.6 0.16 0.08 0.04 0.08 0.8 0 0 0 1 0 0 1 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0.04 0 0 0.96 0 0 0 1 0 0 1 0 1 0 0 0 0 0.96 0 0.04 0 1 0 0 0 0 0.2 0.8 0.08 0.04 0.2 0.68 0.12 0.2 0 0.68 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 2 49 Motif 49 Original Motif Original Motif Forward 2 12 0.1 Original Motif 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 Reverse Complement Motif 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 13 Motif 13 Original Motif Original Motif Forward 1 11 0.565909 Original Motif 1 0 0 0 1 0 0 0 0.5 0 0 0.5 1 0 0 0 0 0 0 1 0.5 0 0.5 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 Reverse Complement Motif 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0.5 0.5 1 0 0 0 0 0 0 1 0.5 0 0 0.5 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 46 Motif 46 Reverse Complement Reverse Complement Forward 4 11 0.565909 Original Motif 1 0 0 0 0 0 0 1 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 1 0 0 0.5 0 0.5 1 0 0 0 0 0 0 1 1 0 0 0 Reverse Complement Motif 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0.5 0.5 0 1 0 0 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 8 Motif 8 Original Motif Reverse Complement Backward 1 11 0.577273 Original Motif 0 0 0 1 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0.5 0.5 0 0 1 0 0 0 0 0 1 0 0 0 1 Reverse Complement Motif 1 0 0 0 1 0 0 0 0 0 1 0 0 0.5 0.5 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 1 0 0 1 0 0 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # 1 Motif ID 12 Motif Name Motif 12 Original Motif 1 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 Reserve Complement Motif 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 1 ************************************************************************ Best Matches for Motif ID 12 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 77 AgTGCTCCACTGTGgTGTCACAgT Reverse Complement Original Motif Backward 7 11 0.074904 Original Motif 0.690141 0.126761 0.0422535 0.140845 0.169014 0.0985915 0.676056 0.056338 0.0422535 0.028169 0.028169 0.901408 0.056338 0 0.774648 0.169014 0.0422535 0.887324 0.0422535 0.028169 0 0.0140845 0 0.985915 0.056338 0.830986 0.0422535 0.0704225 0.028169 0.957746 0.0140845 0 0.957746 0 0.0140845 0.028169 0.084507 0.84507 0.0140845 0.056338 0.028169 0.0140845 0 0.957746 0.140845 0.028169 0.802817 0.028169 0.0140845 0.0140845 0.0140845 0.957746 0.0140845 0 0.929577 0.056338 0.056338 0.15493 0.619718 0.169014 0.0140845 0.028169 0 0.957746 0.056338 0.0140845 0.873239 0.056338 0.0140845 0 0 0.985915 0.0422535 0.929577 0 0.028169 0.957746 0.028169 0 0.0140845 0.028169 0.84507 0.028169 0.0985915 0.873239 0.0140845 0.0422535 0.0704225 0.0985915 0.15493 0.56338 0.183099 0.0704225 0.0140845 0.112676 0.802817 Reverse Complement Motif 0.802817 0.0140845 0.112676 0.0704225 0.0985915 0.56338 0.15493 0.183099 0.0704225 0.0140845 0.0422535 0.873239 0.028169 0.028169 0.84507 0.0985915 0.0140845 0.028169 0 0.957746 0.0422535 0 0.929577 0.028169 0.985915 0 0 0.0140845 0.056338 0.873239 0.0140845 0.056338 0.957746 0.028169 0 0.0140845 0.056338 0.619718 0.15493 0.169014 0.0140845 0.929577 0 0.056338 0.957746 0.0140845 0.0140845 0.0140845 0.140845 0.802817 0.028169 0.028169 0.957746 0.0140845 0 0.028169 0.084507 0.0140845 0.84507 0.056338 0.028169 0 0.0140845 0.957746 0.028169 0.0140845 0.957746 0 0.056338 0.0422535 0.830986 0.0704225 0.985915 0.0140845 0 0 0.0422535 0.0422535 0.887324 0.028169 0.056338 0.774648 0 0.169014 0.901408 0.028169 0.028169 0.0422535 0.169014 0.676056 0.0985915 0.056338 0.140845 0.126761 0.0422535 0.690141 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 33 Motif 33 Reverse Complement Original Motif Backward 2 11 0.0795455 Original Motif 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0.5 0 0.5 0 0 0 1 0 0 0 1 0 0 0 1 0.5 0 0 0.5 1 0 0 0 Reverse Complement Motif 0 0 0 1 0.5 0 0 0.5 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0.5 0.5 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 73 TGGAGCACTGTGACAcCACAGTGg Original Motif Original Motif Forward 13 11 0.0795455 Original Motif 0.0540541 0.0405405 0.0540541 0.851351 0.0405405 0.0135135 0.824324 0.121622 0.0945946 0.135135 0.756757 0.0135135 0.891892 0 0 0.108108 0.0405405 0.0945946 0.810811 0.0540541 0.0810811 0.797297 0.0540541 0.0675676 0.932432 0.027027 0 0.0405405 0.0540541 0.756757 0.135135 0.0540541 0.108108 0.027027 0.0135135 0.851351 0.108108 0 0.851351 0.0405405 0.0135135 0 0.027027 0.959459 0 0.0135135 0.945946 0.0405405 0.905405 0 0.0675676 0.027027 0.0540541 0.837838 0 0.108108 0.945946 0.0135135 0.0405405 0 0.162162 0.5 0.189189 0.148649 0.108108 0.824324 0 0.0675676 0.945946 0 0.0405405 0.0135135 0.0810811 0.837838 0.027027 0.0540541 0.945946 0 0.0135135 0.0405405 0.0540541 0.0675676 0.783784 0.0945946 0.0540541 0.027027 0 0.918919 0.0405405 0.0135135 0.864865 0.0810811 0.148649 0.121622 0.675676 0.0540541 Reverse Complement Motif 0.148649 0.675676 0.121622 0.0540541 0.0405405 0.864865 0.0135135 0.0810811 0.918919 0.027027 0 0.0540541 0.0540541 0.783784 0.0675676 0.0945946 0.0405405 0 0.0135135 0.945946 0.0810811 0.027027 0.837838 0.0540541 0.0135135 0 0.0405405 0.945946 0.108108 0 0.824324 0.0675676 0.162162 0.189189 0.5 0.148649 0 0.0135135 0.0405405 0.945946 0.0540541 0 0.837838 0.108108 0.027027 0 0.0675676 0.905405 0 0.945946 0.0135135 0.0405405 0.959459 0 0.027027 0.0135135 0.108108 0.851351 0 0.0405405 0.851351 0.027027 0.0135135 0.108108 0.0540541 0.135135 0.756757 0.0540541 0.0405405 0.027027 0 0.932432 0.0810811 0.0540541 0.797297 0.0675676 0.0405405 0.810811 0.0945946 0.0540541 0.108108 0 0 0.891892 0.0945946 0.756757 0.135135 0.0135135 0.0405405 0.824324 0.0135135 0.121622 0.851351 0.0405405 0.0540541 0.0540541 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Reverse Complement Backward 1 11 0.0891053 Original Motif 0.111111 0.746032 0.0634921 0.0793651 0.857143 0.047619 0.047619 0.047619 0.047619 0.857143 0.0793651 0.015873 0.031746 0 0 0.968254 0.031746 0.015873 0.904762 0.047619 0 0 0 1 0.031746 0 0.857143 0.111111 0.396825 0.111111 0.412698 0.0793651 0.031746 0.253968 0.015873 0.698413 0.365079 0 0.634921 0 0.0793651 0.206349 0.047619 0.666667 0.047619 0.936508 0.015873 0 0.952381 0 0.015873 0.031746 0.015873 0.920635 0 0.0634921 0.920635 0 0 0.0793651 0.0634921 0.047619 0.84127 0.047619 0 0 0.015873 0.984127 0.047619 0.015873 0.904762 0.031746 0.015873 0.603175 0.31746 0.0634921 0.396825 0 0.015873 0.587302 0.015873 0.47619 0.428571 0.0793651 0.0634921 0.920635 0 0.015873 0.920635 0.015873 0.047619 0.015873 0.0952381 0.68254 0.0952381 0.126984 0.047619 0.015873 0.0952381 0.84127 Reverse Complement Motif 0.84127 0.015873 0.0952381 0.047619 0.0952381 0.0952381 0.68254 0.126984 0.015873 0.015873 0.047619 0.920635 0.0634921 0 0.920635 0.015873 0.015873 0.428571 0.47619 0.0793651 0.587302 0 0.015873 0.396825 0.015873 0.31746 0.603175 0.0634921 0.047619 0.904762 0.015873 0.031746 0.984127 0 0.015873 0 0.0634921 0.84127 0.047619 0.047619 0.0793651 0 0 0.920635 0.015873 0 0.920635 0.0634921 0.031746 0 0.015873 0.952381 0.047619 0.015873 0.936508 0 0.666667 0.206349 0.047619 0.0793651 0.365079 0.634921 0 0 0.698413 0.253968 0.015873 0.031746 0.396825 0.412698 0.111111 0.0793651 0.031746 0.857143 0 0.111111 1 0 0 0 0.031746 0.904762 0.015873 0.047619 0.968254 0 0 0.031746 0.047619 0.0793651 0.857143 0.015873 0.047619 0.047619 0.047619 0.857143 0.111111 0.0634921 0.746032 0.0793651 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 13 Motif 13 Original Motif Original Motif Backward 1 11 0.0909091 Original Motif 1 0 0 0 1 0 0 0 0.5 0 0 0.5 1 0 0 0 0 0 0 1 0.5 0 0.5 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 Reverse Complement Motif 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0.5 0.5 1 0 0 0 0 0 0 1 0.5 0 0 0.5 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 45 Motif 45 Reverse Complement Original Motif Backward 3 11 0.0909091 Original Motif 0 0 0 1 1 0 0 0 1 0 0 0 0 0.5 0.5 0 0 0 0 1 0 1 0 0 0 0 0 1 0.5 0 0 0.5 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0.5 0 0 0.5 1 0 0 0 0 0 1 0 1 0 0 0 0 0.5 0.5 0 0 0 0 1 0 0 0 1 1 0 0 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 46 Motif 46 Reverse Complement Original Motif Backward 4 11 0.102273 Original Motif 1 0 0 0 0 0 0 1 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 1 0 0 0.5 0 0.5 1 0 0 0 0 0 0 1 1 0 0 0 Reverse Complement Motif 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0.5 0.5 0 1 0 0 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 11 Motif 11 Reverse Complement Original Motif Backward 2 11 0.102273 Original Motif 1 0 0 0 1 0 0 0 0.5 0.5 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 0.5 0.5 0 0 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 0 0.5 0 0.5 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0.5 0 0.5 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 7 Motif 7 Reverse Complement Reverse Complement Forward 1 11 0.102273 Original Motif 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0.5 0.5 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 1 Reverse Complement Motif 1 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 1 0 0 0.5 0 0.5 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 2 49 Motif 49 Original Motif Original Motif Backward 1 11 0.113636 Original Motif 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 Reverse Complement Motif 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # 1 Motif ID 13 Motif Name Motif 13 Original Motif 1 0 0 0 1 0 0 0 0.5 0 0 0.5 1 0 0 0 0 0 0 1 0.5 0 0.5 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 Reserve Complement Motif 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0.5 0.5 1 0 0 0 0 0 0 1 0.5 0 0 0.5 0 0 0 1 0 0 0 1 ************************************************************************ Best Matches for Motif ID 13 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 9 Motif 9 Original Motif Original Motif Backward 2 11 0.0795455 Original Motif 1 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 1 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 45 Motif 45 Reverse Complement Reverse Complement Forward 4 11 0.0795455 Original Motif 0 0 0 1 1 0 0 0 1 0 0 0 0 0.5 0.5 0 0 0 0 1 0 1 0 0 0 0 0 1 0.5 0 0 0.5 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0.5 0 0 0.5 1 0 0 0 0 0 1 0 1 0 0 0 0 0.5 0.5 0 0 0 0 1 0 0 0 1 1 0 0 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 7 Motif 7 Original Motif Reverse Complement Forward 1 11 0.0795455 Original Motif 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0.5 0.5 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 1 Reverse Complement Motif 1 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 1 0 0 0.5 0 0.5 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 12 Motif 12 Original Motif Original Motif Backward 1 11 0.0909091 Original Motif 1 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 Reverse Complement Motif 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 10 Motif 10 Original Motif Original Motif Forward 1 11 0.0909091 Original Motif 1 0 0 0 1 0 0 0 1 0 0 0 0.5 0.5 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 Reverse Complement Motif 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0.5 0 0.5 0 0 0 1 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 24 Motif 24 Original Motif Reverse Complement Backward 1 11 0.0909091 Original Motif 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0.5 0 0 0.5 0 1 0 0 1 0 0 0 0 0 0 1 0.5 0 0 0.5 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 0.5 0 0 0.5 1 0 0 0 0 0 0 1 0 0 1 0 0.5 0 0 0.5 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 33 Motif 33 Original Motif Original Motif Backward 3 11 0.0909091 Original Motif 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0.5 0 0.5 0 0 0 1 0 0 0 1 0 0 0 1 0.5 0 0 0.5 1 0 0 0 Reverse Complement Motif 0 0 0 1 0.5 0 0 0.5 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0.5 0.5 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 11 Motif 11 Original Motif Original Motif Forward 1 11 0.0909091 Original Motif 1 0 0 0 1 0 0 0 0.5 0.5 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 0.5 0.5 0 0 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 0 0.5 0 0.5 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0.5 0 0.5 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 25 Motif 25 Original Motif Reverse Complement Backward 1 11 0.0909091 Original Motif 1 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 1 Reverse Complement Motif 1 0 0 0 1 0 0 0 0 0 0 1 0 1 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 2 49 Motif 49 Original Motif Reverse Complement Backward 4 11 0.102273 Original Motif 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 Reverse Complement Motif 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # 1 Motif ID 14 Motif Name Motif 14 Original Motif 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0.5 0.5 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 0 1 0 0 0 Reserve Complement Motif 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0.5 0 0.5 1 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 ************************************************************************ Best Matches for Motif ID 14 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 33 Motif 33 Original Motif Reverse Complement Forward 2 11 0.0482955 Original Motif 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0.5 0 0.5 0 0 0 1 0 0 0 1 0 0 0 1 0.5 0 0 0.5 1 0 0 0 Reverse Complement Motif 0 0 0 1 0.5 0 0 0.5 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0.5 0.5 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 94 TFM13 Original Motif Reverse Complement Backward 9 11 0.0629058 Original Motif 0.0714286 0.142857 0 0.785714 0.0714286 0.0714286 0 0.857143 0 0 0 1 0 0.0714286 0.285714 0.642857 0 0.142857 0 0.857143 0 0 0 1 0.0714286 0 0.0714286 0.857143 0.142857 0 0.357143 0.5 0.0714286 0 0 0.928571 0 0.0714286 0 0.928571 0 0 0.357143 0.642857 0 0 0 1 0 0 0.214286 0.785714 0.142857 0 0 0.857143 0.571429 0.0714286 0.214286 0.142857 0.857143 0 0 0.142857 0.142857 0 0.285714 0.571429 0 0.0714286 0.285714 0.642857 0.357143 0.357143 0.0714286 0.214286 0.428571 0 0.0714286 0.5 Reverse Complement Motif 0.5 0 0.0714286 0.428571 0.214286 0.357143 0.0714286 0.357143 0.642857 0.0714286 0.285714 0 0.571429 0 0.285714 0.142857 0.142857 0 0 0.857143 0.142857 0.0714286 0.214286 0.571429 0.857143 0 0 0.142857 0.785714 0 0.214286 0 1 0 0 0 0.642857 0 0.357143 0 0.928571 0.0714286 0 0 0.928571 0 0 0.0714286 0.5 0 0.357143 0.142857 0.857143 0 0.0714286 0.0714286 1 0 0 0 0.857143 0.142857 0 0 0.642857 0.0714286 0.285714 0 1 0 0 0 0.857143 0.0714286 0 0.0714286 0.785714 0.142857 0 0.0714286 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 16 Motif 16 Original Motif Reverse Complement Backward 2 11 0.0710227 Original Motif 0 0 0 1 0 1 0 0 0 0 0 1 0 0 0.5 0.5 0 0 0 1 0 0 1 0 0 0 0 1 0 1 0 0 1 0 0 0 1 0 0 0 0.5 0 0 0.5 1 0 0 0 Reverse Complement Motif 0 0 0 1 0.5 0 0 0.5 0 0 0 1 0 0 0 1 0 0 1 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0.5 0 0.5 1 0 0 0 0 0 1 0 1 0 0 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 29 Motif 29 Reverse Complement Original Motif Forward 1 11 0.0710227 Original Motif 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 1 1 0 0 0 Reverse Complement Motif 0 0 0 1 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 2 49 Motif 49 Reverse Complement Reverse Complement Forward 2 11 0.0710227 Original Motif 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 Reverse Complement Motif 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 9 Motif 9 Original Motif Reverse Complement Forward 2 11 0.0710227 Original Motif 1 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 1 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 23 Motif 23 Original Motif Reverse Complement Forward 3 11 0.0710227 Original Motif 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0.5 0 0 0.5 0 0 0 1 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0.5 0.5 0 0 1 0 0 0 0 0 0 1 Reverse Complement Motif 1 0 0 0 0 0 0 1 0 0.5 0 0.5 1 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 1 0 0 0 0.5 0 0 0.5 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 91 TFM3 Reverse Complement Original Motif Forward 6 11 0.0752841 Original Motif 0.0625 0.0625 0.3125 0.5625 0.125 0.0625 0 0.8125 0 0 0.0625 0.9375 0 0 0.1875 0.8125 0 0 0.125 0.875 0 0.25 0 0.75 0 0 0.125 0.875 0.1875 0 0.4375 0.375 0 0 0.125 0.875 0 0.125 0 0.875 0 0.0625 0 0.9375 0.125 0 0 0.875 0.125 0.0625 0 0.8125 0 0 0.25 0.75 0.25 0 0.375 0.375 0.9375 0.0625 0 0 0.9375 0 0 0.0625 0 0.3125 0.4375 0.25 Reverse Complement Motif 0 0.4375 0.3125 0.25 0.0625 0 0 0.9375 0 0.0625 0 0.9375 0.25 0.375 0 0.375 0.75 0 0.25 0 0.8125 0.0625 0 0.125 0.875 0 0 0.125 0.9375 0.0625 0 0 0.875 0.125 0 0 0.875 0 0.125 0 0.1875 0.4375 0 0.375 0.875 0 0.125 0 0.75 0.25 0 0 0.875 0 0.125 0 0.8125 0 0.1875 0 0.9375 0 0.0625 0 0.8125 0.0625 0 0.125 0.5625 0.0625 0.3125 0.0625 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 4 Motif 4 Reverse Complement Reverse Complement Backward 3 11 0.0778409 Original Motif 0.45 0.25 0 0.3 0.8 0 0 0.2 0.85 0 0.15 0 1 0 0 0 0.75 0 0.25 0 0.4 0.3 0.05 0.25 0.85 0.1 0 0.05 0.85 0.15 0 0 1 0 0 0 0.5 0.1 0.4 0 0.35 0.65 0 0 0.9 0 0.05 0.05 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 0.05 0 0.05 0.9 0.35 0 0.65 0 0 0.1 0.4 0.5 0 0 0 1 0 0.15 0 0.85 0.05 0.1 0 0.85 0.25 0.3 0.05 0.4 0 0 0.25 0.75 0 0 0 1 0 0 0.15 0.85 0.2 0 0 0.8 0.3 0.25 0 0.45 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 45 Motif 45 Reverse Complement Original Motif Backward 1 11 0.0823864 Original Motif 0 0 0 1 1 0 0 0 1 0 0 0 0 0.5 0.5 0 0 0 0 1 0 1 0 0 0 0 0 1 0.5 0 0 0.5 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0.5 0 0 0.5 1 0 0 0 0 0 1 0 1 0 0 0 0 0.5 0.5 0 0 0 0 1 0 0 0 1 1 0 0 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # 1 Motif ID 15 Motif Name Motif 15 Original Motif 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0.5 0 0.5 0 0 0 0 1 0.5 0.5 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 1 1 0 0 0 Reserve Complement Motif 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0.5 0 0.5 1 0 0 0 0 0 0.5 0.5 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 1 ************************************************************************ Best Matches for Motif ID 15 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 46 Motif 46 Reverse Complement Original Motif Backward 1 13 0.0865385 Original Motif 1 0 0 0 0 0 0 1 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 1 0 0 0.5 0 0.5 1 0 0 0 0 0 0 1 1 0 0 0 Reverse Complement Motif 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0.5 0.5 0 1 0 0 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 60 NR1H2RXRA Original Motif Original Motif Forward 1 13 0.0938462 Original Motif 0.68 0.2 0 0.12 0.68 0.04 0.2 0.08 0.8 0 0.2 0 0 0 1 0 0 0 0.96 0.04 0 0 0 1 0 1 0 0 1 0 0 0 0.96 0 0 0.04 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 1 0 0 1 0 0 0 0.8 0.04 0.08 0.08 0 0.6 0.24 0.16 Reverse Complement Motif 0 0.24 0.6 0.16 0.08 0.04 0.08 0.8 0 0 0 1 0 0 1 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0.04 0 0 0.96 0 0 0 1 0 0 1 0 1 0 0 0 0 0.96 0 0.04 0 1 0 0 0 0 0.2 0.8 0.08 0.04 0.2 0.68 0.12 0.2 0 0.68 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 2 49 Motif 49 Reverse Complement Reverse Complement Backward 1 13 0.0961538 Original Motif 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 Reverse Complement Motif 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 4 Motif 4 Original Motif Original Motif Forward 1 13 0.100962 Original Motif 0.45 0.25 0 0.3 0.8 0 0 0.2 0.85 0 0.15 0 1 0 0 0 0.75 0 0.25 0 0.4 0.3 0.05 0.25 0.85 0.1 0 0.05 0.85 0.15 0 0 1 0 0 0 0.5 0.1 0.4 0 0.35 0.65 0 0 0.9 0 0.05 0.05 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 0.05 0 0.05 0.9 0.35 0 0.65 0 0 0.1 0.4 0.5 0 0 0 1 0 0.15 0 0.85 0.05 0.1 0 0.85 0.25 0.3 0.05 0.4 0 0 0.25 0.75 0 0 0 1 0 0 0.15 0.85 0.2 0 0 0.8 0.3 0.25 0 0.45 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 94 TFM13 Original Motif Reverse Complement Backward 2 13 0.101648 Original Motif 0.0714286 0.142857 0 0.785714 0.0714286 0.0714286 0 0.857143 0 0 0 1 0 0.0714286 0.285714 0.642857 0 0.142857 0 0.857143 0 0 0 1 0.0714286 0 0.0714286 0.857143 0.142857 0 0.357143 0.5 0.0714286 0 0 0.928571 0 0.0714286 0 0.928571 0 0 0.357143 0.642857 0 0 0 1 0 0 0.214286 0.785714 0.142857 0 0 0.857143 0.571429 0.0714286 0.214286 0.142857 0.857143 0 0 0.142857 0.142857 0 0.285714 0.571429 0 0.0714286 0.285714 0.642857 0.357143 0.357143 0.0714286 0.214286 0.428571 0 0.0714286 0.5 Reverse Complement Motif 0.5 0 0.0714286 0.428571 0.214286 0.357143 0.0714286 0.357143 0.642857 0.0714286 0.285714 0 0.571429 0 0.285714 0.142857 0.142857 0 0 0.857143 0.142857 0.0714286 0.214286 0.571429 0.857143 0 0 0.142857 0.785714 0 0.214286 0 1 0 0 0 0.642857 0 0.357143 0 0.928571 0.0714286 0 0 0.928571 0 0 0.0714286 0.5 0 0.357143 0.142857 0.857143 0 0.0714286 0.0714286 1 0 0 0 0.857143 0.142857 0 0 0.642857 0.0714286 0.285714 0 1 0 0 0 0.857143 0.0714286 0 0.0714286 0.785714 0.142857 0 0.0714286 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 91 TFM3 Reverse Complement Original Motif Backward 6 13 0.110577 Original Motif 0.0625 0.0625 0.3125 0.5625 0.125 0.0625 0 0.8125 0 0 0.0625 0.9375 0 0 0.1875 0.8125 0 0 0.125 0.875 0 0.25 0 0.75 0 0 0.125 0.875 0.1875 0 0.4375 0.375 0 0 0.125 0.875 0 0.125 0 0.875 0 0.0625 0 0.9375 0.125 0 0 0.875 0.125 0.0625 0 0.8125 0 0 0.25 0.75 0.25 0 0.375 0.375 0.9375 0.0625 0 0 0.9375 0 0 0.0625 0 0.3125 0.4375 0.25 Reverse Complement Motif 0 0.4375 0.3125 0.25 0.0625 0 0 0.9375 0 0.0625 0 0.9375 0.25 0.375 0 0.375 0.75 0 0.25 0 0.8125 0.0625 0 0.125 0.875 0 0 0.125 0.9375 0.0625 0 0 0.875 0.125 0 0 0.875 0 0.125 0 0.1875 0.4375 0 0.375 0.875 0 0.125 0 0.75 0.25 0 0 0.875 0 0.125 0 0.8125 0 0.1875 0 0.9375 0 0.0625 0 0.8125 0.0625 0 0.125 0.5625 0.0625 0.3125 0.0625 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 45 Motif 45 Original Motif Reverse Complement Forward 2 13 0.125 Original Motif 0 0 0 1 1 0 0 0 1 0 0 0 0 0.5 0.5 0 0 0 0 1 0 1 0 0 0 0 0 1 0.5 0 0 0.5 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0.5 0 0 0.5 1 0 0 0 0 0 1 0 1 0 0 0 0 0.5 0.5 0 0 0 0 1 0 0 0 1 1 0 0 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 5 Motif 5 Original Motif Reverse Complement Forward 1 13 0.125 Original Motif 0 0.8125 0.125 0.0625 0.375 0 0 0.625 0.0625 0 0.9375 0 0.5625 0.125 0.1875 0.125 0 0 1 0 0.0625 0.9375 0 0 0 0.9375 0.0625 0 1 0 0 0 0 0.625 0 0.375 0 0.9375 0.0625 0 0 0 0 1 0 0.5625 0 0.4375 0 0.125 0.125 0.75 0.0625 0.625 0 0.3125 Reverse Complement Motif 0.0625 0 0.625 0.3125 0.75 0.125 0.125 0 0 0 0.5625 0.4375 1 0 0 0 0 0.0625 0.9375 0 0 0 0.625 0.375 0 0 0 1 0 0.0625 0.9375 0 0.0625 0 0.9375 0 0 1 0 0 0.125 0.125 0.1875 0.5625 0.0625 0.9375 0 0 0.625 0 0 0.375 0 0.125 0.8125 0.0625 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 23 Motif 23 Reverse Complement Original Motif Forward 2 13 0.125 Original Motif 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0.5 0 0 0.5 0 0 0 1 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0.5 0.5 0 0 1 0 0 0 0 0 0 1 Reverse Complement Motif 1 0 0 0 0 0 0 1 0 0.5 0 0.5 1 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 1 0 0 0 0.5 0 0 0.5 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 22 Motif 22 Reverse Complement Original Motif Forward 3 12 0.614583 Original Motif 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 1 Reverse Complement Motif 1 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # 1 Motif ID 16 Motif Name Motif 16 Original Motif 0 0 0 1 0 1 0 0 0 0 0 1 0 0 0.5 0.5 0 0 0 1 0 0 1 0 0 0 0 1 0 1 0 0 1 0 0 0 1 0 0 0 0.5 0 0 0.5 1 0 0 0 Reserve Complement Motif 0 0 0 1 0.5 0 0 0.5 0 0 0 1 0 0 0 1 0 0 1 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0.5 0 0.5 1 0 0 0 0 0 1 0 1 0 0 0 ************************************************************************ Best Matches for Motif ID 16 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 73 TGGAGCACTGTGACAcCACAGTGg Original Motif Original Motif Backward 7 12 0.100225 Original Motif 0.0540541 0.0405405 0.0540541 0.851351 0.0405405 0.0135135 0.824324 0.121622 0.0945946 0.135135 0.756757 0.0135135 0.891892 0 0 0.108108 0.0405405 0.0945946 0.810811 0.0540541 0.0810811 0.797297 0.0540541 0.0675676 0.932432 0.027027 0 0.0405405 0.0540541 0.756757 0.135135 0.0540541 0.108108 0.027027 0.0135135 0.851351 0.108108 0 0.851351 0.0405405 0.0135135 0 0.027027 0.959459 0 0.0135135 0.945946 0.0405405 0.905405 0 0.0675676 0.027027 0.0540541 0.837838 0 0.108108 0.945946 0.0135135 0.0405405 0 0.162162 0.5 0.189189 0.148649 0.108108 0.824324 0 0.0675676 0.945946 0 0.0405405 0.0135135 0.0810811 0.837838 0.027027 0.0540541 0.945946 0 0.0135135 0.0405405 0.0540541 0.0675676 0.783784 0.0945946 0.0540541 0.027027 0 0.918919 0.0405405 0.0135135 0.864865 0.0810811 0.148649 0.121622 0.675676 0.0540541 Reverse Complement Motif 0.148649 0.675676 0.121622 0.0540541 0.0405405 0.864865 0.0135135 0.0810811 0.918919 0.027027 0 0.0540541 0.0540541 0.783784 0.0675676 0.0945946 0.0405405 0 0.0135135 0.945946 0.0810811 0.027027 0.837838 0.0540541 0.0135135 0 0.0405405 0.945946 0.108108 0 0.824324 0.0675676 0.162162 0.189189 0.5 0.148649 0 0.0135135 0.0405405 0.945946 0.0540541 0 0.837838 0.108108 0.027027 0 0.0675676 0.905405 0 0.945946 0.0135135 0.0405405 0.959459 0 0.027027 0.0135135 0.108108 0.851351 0 0.0405405 0.851351 0.027027 0.0135135 0.108108 0.0540541 0.135135 0.756757 0.0540541 0.0405405 0.027027 0 0.932432 0.0810811 0.0540541 0.797297 0.0675676 0.0405405 0.810811 0.0945946 0.0540541 0.108108 0 0 0.891892 0.0945946 0.756757 0.135135 0.0135135 0.0405405 0.824324 0.0135135 0.121622 0.851351 0.0405405 0.0540541 0.0540541 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Reverse Complement Backward 6 12 0.100694 Original Motif 0.111111 0.746032 0.0634921 0.0793651 0.857143 0.047619 0.047619 0.047619 0.047619 0.857143 0.0793651 0.015873 0.031746 0 0 0.968254 0.031746 0.015873 0.904762 0.047619 0 0 0 1 0.031746 0 0.857143 0.111111 0.396825 0.111111 0.412698 0.0793651 0.031746 0.253968 0.015873 0.698413 0.365079 0 0.634921 0 0.0793651 0.206349 0.047619 0.666667 0.047619 0.936508 0.015873 0 0.952381 0 0.015873 0.031746 0.015873 0.920635 0 0.0634921 0.920635 0 0 0.0793651 0.0634921 0.047619 0.84127 0.047619 0 0 0.015873 0.984127 0.047619 0.015873 0.904762 0.031746 0.015873 0.603175 0.31746 0.0634921 0.396825 0 0.015873 0.587302 0.015873 0.47619 0.428571 0.0793651 0.0634921 0.920635 0 0.015873 0.920635 0.015873 0.047619 0.015873 0.0952381 0.68254 0.0952381 0.126984 0.047619 0.015873 0.0952381 0.84127 Reverse Complement Motif 0.84127 0.015873 0.0952381 0.047619 0.0952381 0.0952381 0.68254 0.126984 0.015873 0.015873 0.047619 0.920635 0.0634921 0 0.920635 0.015873 0.015873 0.428571 0.47619 0.0793651 0.587302 0 0.015873 0.396825 0.015873 0.31746 0.603175 0.0634921 0.047619 0.904762 0.015873 0.031746 0.984127 0 0.015873 0 0.0634921 0.84127 0.047619 0.047619 0.0793651 0 0 0.920635 0.015873 0 0.920635 0.0634921 0.031746 0 0.015873 0.952381 0.047619 0.015873 0.936508 0 0.666667 0.206349 0.047619 0.0793651 0.365079 0.634921 0 0 0.698413 0.253968 0.015873 0.031746 0.396825 0.412698 0.111111 0.0793651 0.031746 0.857143 0 0.111111 1 0 0 0 0.031746 0.904762 0.015873 0.047619 0.968254 0 0 0.031746 0.047619 0.0793651 0.857143 0.015873 0.047619 0.047619 0.047619 0.857143 0.111111 0.0634921 0.746032 0.0793651 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 67 TgTGgTGTCACAGTGCTCC Reverse Complement Original Motif Forward 3 12 0.102141 Original Motif 0.111111 0.0833333 0.0555556 0.75 0.125 0.0972222 0.652778 0.125 0.0416667 0.0972222 0.0277778 0.833333 0.0277778 0.0277778 0.791667 0.152778 0.0555556 0.166667 0.652778 0.125 0 0.0416667 0.0138889 0.944444 0.0416667 0 0.888889 0.0694444 0.0277778 0.0277778 0 0.944444 0.0416667 0.944444 0.0138889 0 0.916667 0.0277778 0 0.0555556 0.0694444 0.875 0 0.0555556 0.833333 0.0138889 0.0138889 0.138889 0.0416667 0.0694444 0.819444 0.0694444 0.0277778 0.0277778 0.0277778 0.916667 0.0694444 0.0138889 0.847222 0.0694444 0.0694444 0.777778 0.0277778 0.125 0.0555556 0.0416667 0.0277778 0.875 0.0416667 0.708333 0.125 0.125 0.111111 0.819444 0.0555556 0.0138889 Reverse Complement Motif 0.111111 0.0555556 0.819444 0.0138889 0.0416667 0.125 0.708333 0.125 0.875 0.0416667 0.0277778 0.0555556 0.0694444 0.0277778 0.777778 0.125 0.0694444 0.847222 0.0138889 0.0694444 0.916667 0.0277778 0.0277778 0.0277778 0.0416667 0.819444 0.0694444 0.0694444 0.138889 0.0138889 0.0138889 0.833333 0.0694444 0 0.875 0.0555556 0.0555556 0.0277778 0 0.916667 0.0416667 0.0138889 0.944444 0 0.944444 0.0277778 0 0.0277778 0.0416667 0.888889 0 0.0694444 0.944444 0.0416667 0.0138889 0 0.0555556 0.652778 0.166667 0.125 0.0277778 0.791667 0.0277778 0.152778 0.833333 0.0972222 0.0277778 0.0416667 0.125 0.652778 0.0972222 0.125 0.75 0.0833333 0.0555556 0.111111 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 77 AgTGCTCCACTGTGgTGTCACAgT Reverse Complement Original Motif Forward 13 12 0.103433 Original Motif 0.690141 0.126761 0.0422535 0.140845 0.169014 0.0985915 0.676056 0.056338 0.0422535 0.028169 0.028169 0.901408 0.056338 0 0.774648 0.169014 0.0422535 0.887324 0.0422535 0.028169 0 0.0140845 0 0.985915 0.056338 0.830986 0.0422535 0.0704225 0.028169 0.957746 0.0140845 0 0.957746 0 0.0140845 0.028169 0.084507 0.84507 0.0140845 0.056338 0.028169 0.0140845 0 0.957746 0.140845 0.028169 0.802817 0.028169 0.0140845 0.0140845 0.0140845 0.957746 0.0140845 0 0.929577 0.056338 0.056338 0.15493 0.619718 0.169014 0.0140845 0.028169 0 0.957746 0.056338 0.0140845 0.873239 0.056338 0.0140845 0 0 0.985915 0.0422535 0.929577 0 0.028169 0.957746 0.028169 0 0.0140845 0.028169 0.84507 0.028169 0.0985915 0.873239 0.0140845 0.0422535 0.0704225 0.0985915 0.15493 0.56338 0.183099 0.0704225 0.0140845 0.112676 0.802817 Reverse Complement Motif 0.802817 0.0140845 0.112676 0.0704225 0.0985915 0.56338 0.15493 0.183099 0.0704225 0.0140845 0.0422535 0.873239 0.028169 0.028169 0.84507 0.0985915 0.0140845 0.028169 0 0.957746 0.0422535 0 0.929577 0.028169 0.985915 0 0 0.0140845 0.056338 0.873239 0.0140845 0.056338 0.957746 0.028169 0 0.0140845 0.056338 0.619718 0.15493 0.169014 0.0140845 0.929577 0 0.056338 0.957746 0.0140845 0.0140845 0.0140845 0.140845 0.802817 0.028169 0.028169 0.957746 0.0140845 0 0.028169 0.084507 0.0140845 0.84507 0.056338 0.028169 0 0.0140845 0.957746 0.028169 0.0140845 0.957746 0 0.056338 0.0422535 0.830986 0.0704225 0.985915 0.0140845 0 0 0.0422535 0.0422535 0.887324 0.028169 0.056338 0.774648 0 0.169014 0.901408 0.028169 0.028169 0.0422535 0.169014 0.676056 0.0985915 0.056338 0.140845 0.126761 0.0422535 0.690141 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 71 AmTGTGACACCACAGT Original Motif Original Motif Backward 5 12 0.104492 Original Motif 0.703125 0.1875 0.015625 0.09375 0.265625 0.5 0.125 0.109375 0.015625 0.046875 0.03125 0.90625 0.078125 0.015625 0.890625 0.015625 0 0 0 1 0 0.03125 0.90625 0.0625 0.953125 0 0.015625 0.03125 0.046875 0.890625 0 0.0625 0.96875 0 0.015625 0.015625 0.109375 0.78125 0.0625 0.046875 0.0625 0.890625 0 0.046875 0.953125 0 0.03125 0.015625 0.03125 0.78125 0.046875 0.140625 0.9375 0.015625 0.03125 0.015625 0.09375 0.078125 0.734375 0.09375 0.03125 0.078125 0 0.890625 Reverse Complement Motif 0.890625 0.078125 0 0.03125 0.09375 0.734375 0.078125 0.09375 0.015625 0.015625 0.03125 0.9375 0.03125 0.046875 0.78125 0.140625 0.015625 0 0.03125 0.953125 0.0625 0 0.890625 0.046875 0.109375 0.0625 0.78125 0.046875 0.015625 0 0.015625 0.96875 0.046875 0 0.890625 0.0625 0.03125 0 0.015625 0.953125 0 0.90625 0.03125 0.0625 1 0 0 0 0.078125 0.890625 0.015625 0.015625 0.90625 0.046875 0.03125 0.015625 0.265625 0.125 0.5 0.109375 0.09375 0.1875 0.015625 0.703125 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 91 TFM3 Original Motif Original Motif Forward 5 12 0.11849 Original Motif 0.0625 0.0625 0.3125 0.5625 0.125 0.0625 0 0.8125 0 0 0.0625 0.9375 0 0 0.1875 0.8125 0 0 0.125 0.875 0 0.25 0 0.75 0 0 0.125 0.875 0.1875 0 0.4375 0.375 0 0 0.125 0.875 0 0.125 0 0.875 0 0.0625 0 0.9375 0.125 0 0 0.875 0.125 0.0625 0 0.8125 0 0 0.25 0.75 0.25 0 0.375 0.375 0.9375 0.0625 0 0 0.9375 0 0 0.0625 0 0.3125 0.4375 0.25 Reverse Complement Motif 0 0.4375 0.3125 0.25 0.0625 0 0 0.9375 0 0.0625 0 0.9375 0.25 0.375 0 0.375 0.75 0 0.25 0 0.8125 0.0625 0 0.125 0.875 0 0 0.125 0.9375 0.0625 0 0 0.875 0.125 0 0 0.875 0 0.125 0 0.1875 0.4375 0 0.375 0.875 0 0.125 0 0.75 0.25 0 0 0.875 0 0.125 0 0.8125 0 0.1875 0 0.9375 0 0.0625 0 0.8125 0.0625 0 0.125 0.5625 0.0625 0.3125 0.0625 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 94 TFM13 Original Motif Original Motif Forward 8 12 0.119048 Original Motif 0.0714286 0.142857 0 0.785714 0.0714286 0.0714286 0 0.857143 0 0 0 1 0 0.0714286 0.285714 0.642857 0 0.142857 0 0.857143 0 0 0 1 0.0714286 0 0.0714286 0.857143 0.142857 0 0.357143 0.5 0.0714286 0 0 0.928571 0 0.0714286 0 0.928571 0 0 0.357143 0.642857 0 0 0 1 0 0 0.214286 0.785714 0.142857 0 0 0.857143 0.571429 0.0714286 0.214286 0.142857 0.857143 0 0 0.142857 0.142857 0 0.285714 0.571429 0 0.0714286 0.285714 0.642857 0.357143 0.357143 0.0714286 0.214286 0.428571 0 0.0714286 0.5 Reverse Complement Motif 0.5 0 0.0714286 0.428571 0.214286 0.357143 0.0714286 0.357143 0.642857 0.0714286 0.285714 0 0.571429 0 0.285714 0.142857 0.142857 0 0 0.857143 0.142857 0.0714286 0.214286 0.571429 0.857143 0 0 0.142857 0.785714 0 0.214286 0 1 0 0 0 0.642857 0 0.357143 0 0.928571 0.0714286 0 0 0.928571 0 0 0.0714286 0.5 0 0.357143 0.142857 0.857143 0 0.0714286 0.0714286 1 0 0 0 0.857143 0.142857 0 0 0.642857 0.0714286 0.285714 0 1 0 0 0 0.857143 0.0714286 0 0.0714286 0.785714 0.142857 0 0.0714286 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 64 PPARGRXRA Original Motif Reverse Complement Forward 4 12 0.121043 Original Motif 0.109685 0.369895 0.373396 0.147025 0.117716 0.193473 0.148019 0.540793 0.453488 0.0267442 0.427907 0.0918605 0.116144 0.00348432 0.779326 0.101045 0.161253 0.0174014 0.781903 0.0394432 0.168213 0.149652 0.458237 0.223898 0.0822711 0.633835 0.207416 0.0764774 0.949015 0.0243337 0.0173812 0.00926999 0.604867 0.0556199 0.312862 0.0266512 0.825231 0.00578704 0.158565 0.0104167 0.0950174 0.0023175 0.88876 0.013905 0.0475087 0.0104287 0.803013 0.13905 0.0254925 0.114716 0.304751 0.555041 0.062645 0.643852 0.167053 0.12645 0.784223 0.0672854 0.0545244 0.0939675 Reverse Complement Motif 0.0939675 0.0672854 0.0545244 0.784223 0.062645 0.167053 0.643852 0.12645 0.555041 0.114716 0.304751 0.0254925 0.0475087 0.803013 0.0104287 0.13905 0.0950174 0.88876 0.0023175 0.013905 0.0104167 0.00578704 0.158565 0.825231 0.0266512 0.0556199 0.312862 0.604867 0.00926999 0.0243337 0.0173812 0.949015 0.0822711 0.207416 0.633835 0.0764774 0.168213 0.458237 0.149652 0.223898 0.161253 0.781903 0.0174014 0.0394432 0.116144 0.779326 0.00348432 0.101045 0.0918605 0.0267442 0.427907 0.453488 0.540793 0.193473 0.148019 0.117716 0.109685 0.373396 0.369895 0.147025 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 60 NR1H2RXRA Original Motif Reverse Complement Backward 1 12 0.121667 Original Motif 0.68 0.2 0 0.12 0.68 0.04 0.2 0.08 0.8 0 0.2 0 0 0 1 0 0 0 0.96 0.04 0 0 0 1 0 1 0 0 1 0 0 0 0.96 0 0 0.04 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 1 0 0 1 0 0 0 0.8 0.04 0.08 0.08 0 0.6 0.24 0.16 Reverse Complement Motif 0 0.24 0.6 0.16 0.08 0.04 0.08 0.8 0 0 0 1 0 0 1 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0.04 0 0 0.96 0 0 0 1 0 0 1 0 1 0 0 0 0 0.96 0 0.04 0 1 0 0 0 0 0.2 0.8 0.08 0.04 0.2 0.68 0.12 0.2 0 0.68 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 33 Motif 33 Reverse Complement Reverse Complement Backward 2 12 0.125 Original Motif 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0.5 0 0.5 0 0 0 1 0 0 0 1 0 0 0 1 0.5 0 0 0.5 1 0 0 0 Reverse Complement Motif 0 0 0 1 0.5 0 0 0.5 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0.5 0.5 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # 1 Motif ID 17 Motif Name Motif 17 Original Motif 0 1 0 0 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 1 0 0 Reserve Complement Motif 0 0 1 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 1 0 ************************************************************************ Best Matches for Motif ID 17 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 60 NR1H2RXRA Reverse Complement Original Motif Backward 6 11 0.0348052 Original Motif 0.68 0.2 0 0.12 0.68 0.04 0.2 0.08 0.8 0 0.2 0 0 0 1 0 0 0 0.96 0.04 0 0 0 1 0 1 0 0 1 0 0 0 0.96 0 0 0.04 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 1 0 0 1 0 0 0 0.8 0.04 0.08 0.08 0 0.6 0.24 0.16 Reverse Complement Motif 0 0.24 0.6 0.16 0.08 0.04 0.08 0.8 0 0 0 1 0 0 1 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0.04 0 0 0.96 0 0 0 1 0 0 1 0 1 0 0 0 0 0.96 0 0.04 0 1 0 0 0 0 0.2 0.8 0.08 0.04 0.2 0.68 0.12 0.2 0 0.68 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 64 PPARGRXRA Reverse Complement Original Motif Forward 2 11 0.0792232 Original Motif 0.109685 0.369895 0.373396 0.147025 0.117716 0.193473 0.148019 0.540793 0.453488 0.0267442 0.427907 0.0918605 0.116144 0.00348432 0.779326 0.101045 0.161253 0.0174014 0.781903 0.0394432 0.168213 0.149652 0.458237 0.223898 0.0822711 0.633835 0.207416 0.0764774 0.949015 0.0243337 0.0173812 0.00926999 0.604867 0.0556199 0.312862 0.0266512 0.825231 0.00578704 0.158565 0.0104167 0.0950174 0.0023175 0.88876 0.013905 0.0475087 0.0104287 0.803013 0.13905 0.0254925 0.114716 0.304751 0.555041 0.062645 0.643852 0.167053 0.12645 0.784223 0.0672854 0.0545244 0.0939675 Reverse Complement Motif 0.0939675 0.0672854 0.0545244 0.784223 0.062645 0.167053 0.643852 0.12645 0.555041 0.114716 0.304751 0.0254925 0.0475087 0.803013 0.0104287 0.13905 0.0950174 0.88876 0.0023175 0.013905 0.0104167 0.00578704 0.158565 0.825231 0.0266512 0.0556199 0.312862 0.604867 0.00926999 0.0243337 0.0173812 0.949015 0.0822711 0.207416 0.633835 0.0764774 0.168213 0.458237 0.149652 0.223898 0.161253 0.781903 0.0174014 0.0394432 0.116144 0.779326 0.00348432 0.101045 0.0918605 0.0267442 0.427907 0.453488 0.540793 0.193473 0.148019 0.117716 0.109685 0.373396 0.369895 0.147025 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 22 Motif 22 Reverse Complement Original Motif Backward 1 11 0.0793506 Original Motif 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 1 Reverse Complement Motif 1 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 21 Motif 21 Reverse Complement Reverse Complement Backward 1 11 0.0793506 Original Motif 0 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 0.5 0.5 0 0 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 0 0.5 0 0.5 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 15 Motif 15 Original Motif Reverse Complement Backward 2 11 0.0793506 Original Motif 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0.5 0 0.5 0 0 0 0 1 0.5 0.5 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 1 1 0 0 0 Reverse Complement Motif 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0.5 0 0.5 1 0 0 0 0 0 0.5 0.5 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 24 Motif 24 Original Motif Reverse Complement Backward 1 11 0.0793506 Original Motif 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0.5 0 0 0.5 0 1 0 0 1 0 0 0 0 0 0 1 0.5 0 0 0.5 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 0.5 0 0 0.5 1 0 0 0 0 0 0 1 0 0 1 0 0.5 0 0 0.5 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 59 ESR2 Original Motif Reverse Complement Backward 2 11 0.0794143 Original Motif 0.218487 0.45098 0.176471 0.154062 0.442577 0.142857 0.114846 0.29972 0.521008 0.0420168 0.431373 0.00560224 0.0756303 0 0.770308 0.154062 0.0504202 0.0560224 0.893557 0 0.0364146 0.0532213 0.092437 0.817927 0 1 0 0 0.943978 0.00280112 0 0.0532213 0.137255 0.344538 0.316527 0.201681 0.179272 0.176471 0.417367 0.226891 0.145658 0.170868 0.411765 0.271709 0.0588235 0.092437 0.0672269 0.781513 0.176471 0.070028 0.742297 0.0112045 0.498599 0.277311 0.0532213 0.170868 0.0952381 0.7507 0.00560224 0.148459 0.128852 0.809524 0 0.0616246 0.0756303 0.252101 0 0.672269 0.168067 0.263305 0.380952 0.187675 Reverse Complement Motif 0.168067 0.380952 0.263305 0.187675 0.672269 0.252101 0 0.0756303 0.128852 0 0.809524 0.0616246 0.0952381 0.00560224 0.7507 0.148459 0.170868 0.277311 0.0532213 0.498599 0.176471 0.742297 0.070028 0.0112045 0.781513 0.092437 0.0672269 0.0588235 0.145658 0.411765 0.170868 0.271709 0.179272 0.417367 0.176471 0.226891 0.137255 0.316527 0.344538 0.201681 0.0532213 0.00280112 0 0.943978 0 0 1 0 0.817927 0.0532213 0.092437 0.0364146 0.0504202 0.893557 0.0560224 0 0.0756303 0.770308 0 0.154062 0.00560224 0.0420168 0.431373 0.521008 0.29972 0.142857 0.114846 0.442577 0.218487 0.176471 0.45098 0.154062 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 77 AgTGCTCCACTGTGgTGTCACAgT Original Motif Reverse Complement Backward 14 11 0.0799909 Original Motif 0.690141 0.126761 0.0422535 0.140845 0.169014 0.0985915 0.676056 0.056338 0.0422535 0.028169 0.028169 0.901408 0.056338 0 0.774648 0.169014 0.0422535 0.887324 0.0422535 0.028169 0 0.0140845 0 0.985915 0.056338 0.830986 0.0422535 0.0704225 0.028169 0.957746 0.0140845 0 0.957746 0 0.0140845 0.028169 0.084507 0.84507 0.0140845 0.056338 0.028169 0.0140845 0 0.957746 0.140845 0.028169 0.802817 0.028169 0.0140845 0.0140845 0.0140845 0.957746 0.0140845 0 0.929577 0.056338 0.056338 0.15493 0.619718 0.169014 0.0140845 0.028169 0 0.957746 0.056338 0.0140845 0.873239 0.056338 0.0140845 0 0 0.985915 0.0422535 0.929577 0 0.028169 0.957746 0.028169 0 0.0140845 0.028169 0.84507 0.028169 0.0985915 0.873239 0.0140845 0.0422535 0.0704225 0.0985915 0.15493 0.56338 0.183099 0.0704225 0.0140845 0.112676 0.802817 Reverse Complement Motif 0.802817 0.0140845 0.112676 0.0704225 0.0985915 0.56338 0.15493 0.183099 0.0704225 0.0140845 0.0422535 0.873239 0.028169 0.028169 0.84507 0.0985915 0.0140845 0.028169 0 0.957746 0.0422535 0 0.929577 0.028169 0.985915 0 0 0.0140845 0.056338 0.873239 0.0140845 0.056338 0.957746 0.028169 0 0.0140845 0.056338 0.619718 0.15493 0.169014 0.0140845 0.929577 0 0.056338 0.957746 0.0140845 0.0140845 0.0140845 0.140845 0.802817 0.028169 0.028169 0.957746 0.0140845 0 0.028169 0.084507 0.0140845 0.84507 0.056338 0.028169 0 0.0140845 0.957746 0.028169 0.0140845 0.957746 0 0.056338 0.0422535 0.830986 0.0704225 0.985915 0.0140845 0 0 0.0422535 0.0422535 0.887324 0.028169 0.056338 0.774648 0 0.169014 0.901408 0.028169 0.028169 0.0422535 0.169014 0.676056 0.0985915 0.056338 0.140845 0.126761 0.0422535 0.690141 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 71 AmTGTGACACCACAGT Reverse Complement Reverse Complement Backward 1 11 0.0800609 Original Motif 0.703125 0.1875 0.015625 0.09375 0.265625 0.5 0.125 0.109375 0.015625 0.046875 0.03125 0.90625 0.078125 0.015625 0.890625 0.015625 0 0 0 1 0 0.03125 0.90625 0.0625 0.953125 0 0.015625 0.03125 0.046875 0.890625 0 0.0625 0.96875 0 0.015625 0.015625 0.109375 0.78125 0.0625 0.046875 0.0625 0.890625 0 0.046875 0.953125 0 0.03125 0.015625 0.03125 0.78125 0.046875 0.140625 0.9375 0.015625 0.03125 0.015625 0.09375 0.078125 0.734375 0.09375 0.03125 0.078125 0 0.890625 Reverse Complement Motif 0.890625 0.078125 0 0.03125 0.09375 0.734375 0.078125 0.09375 0.015625 0.015625 0.03125 0.9375 0.03125 0.046875 0.78125 0.140625 0.015625 0 0.03125 0.953125 0.0625 0 0.890625 0.046875 0.109375 0.0625 0.78125 0.046875 0.015625 0 0.015625 0.96875 0.046875 0 0.890625 0.0625 0.03125 0 0.015625 0.953125 0 0.90625 0.03125 0.0625 1 0 0 0 0.078125 0.890625 0.015625 0.015625 0.90625 0.046875 0.03125 0.015625 0.265625 0.125 0.5 0.109375 0.09375 0.1875 0.015625 0.703125 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 57 REST Original Motif Reverse Complement Backward 10 11 0.0877439 Original Motif 0.132621 0.109365 0.230044 0.52797 0.0363181 0.168441 0.0914214 0.70382 0.0475892 0.855354 0.0313087 0.0657483 0.906367 0.0187266 0.0586767 0.0162297 0.021197 0.0274314 0.945137 0.00623441 0.0760125 0.609346 0.201246 0.113396 0.980697 0.00435866 0.00747198 0.00747198 0.001868 0.987547 0.00747198 0.00311333 0.0217933 0.922167 0.0124533 0.0435866 0.568847 0.125234 0.100935 0.204984 0.136534 0.233791 0.0773067 0.552369 0.0243142 0.00436409 0.966958 0.00436409 0.0124688 0.00311721 0.983167 0.00124688 0.877105 0.069869 0.0212102 0.0318153 0.008125 0.8 0.145625 0.04625 0.98375 0.005625 0.004375 0.00625 0.0263488 0.00815558 0.959849 0.00564617 0.128688 0.632141 0.114878 0.124294 0.229899 0.0194724 0.432161 0.318467 0.133962 0.586792 0.200629 0.0786164 0.112579 0.700629 0.0232704 0.163522 Reverse Complement Motif 0.112579 0.0232704 0.700629 0.163522 0.133962 0.200629 0.586792 0.0786164 0.229899 0.432161 0.0194724 0.318467 0.128688 0.114878 0.632141 0.124294 0.0263488 0.959849 0.00815558 0.00564617 0.00625 0.005625 0.004375 0.98375 0.008125 0.145625 0.8 0.04625 0.0318153 0.069869 0.0212102 0.877105 0.0124688 0.983167 0.00311721 0.00124688 0.0243142 0.966958 0.00436409 0.00436409 0.552369 0.233791 0.0773067 0.136534 0.204984 0.125234 0.100935 0.568847 0.0217933 0.0124533 0.922167 0.0435866 0.001868 0.00747198 0.987547 0.00311333 0.00747198 0.00435866 0.00747198 0.980697 0.0760125 0.201246 0.609346 0.113396 0.021197 0.945137 0.0274314 0.00623441 0.0162297 0.0187266 0.0586767 0.906367 0.0475892 0.0313087 0.855354 0.0657483 0.70382 0.168441 0.0914214 0.0363181 0.52797 0.109365 0.230044 0.132621 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # 1 Motif ID 18 Motif Name Motif 18 Original Motif 0 1 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 1 0 1 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 1 0 0 Reserve Complement Motif 0 0 1 0 0 1 0 0 0 0 0 1 0 0 1 0 0 0 1 0 1 0 0 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 1 0 ************************************************************************ Best Matches for Motif ID 18 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 60 NR1H2RXRA Original Motif Original Motif Forward 7 11 0.0763636 Original Motif 0.68 0.2 0 0.12 0.68 0.04 0.2 0.08 0.8 0 0.2 0 0 0 1 0 0 0 0.96 0.04 0 0 0 1 0 1 0 0 1 0 0 0 0.96 0 0 0.04 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 1 0 0 1 0 0 0 0.8 0.04 0.08 0.08 0 0.6 0.24 0.16 Reverse Complement Motif 0 0.24 0.6 0.16 0.08 0.04 0.08 0.8 0 0 0 1 0 0 1 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0.04 0 0 0.96 0 0 0 1 0 0 1 0 1 0 0 0 0 0.96 0 0.04 0 1 0 0 0 0 0.2 0.8 0.08 0.04 0.2 0.68 0.12 0.2 0 0.68 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 70 CagTGCTCCACTGTGgT Original Motif Reverse Complement Backward 5 11 0.0780303 Original Motif 0.15 0.7 0.0166667 0.133333 0.65 0.15 0.05 0.15 0.166667 0.116667 0.633333 0.0833333 0.05 0.0333333 0.0666667 0.85 0.05 0 0.833333 0.116667 0.0166667 0.966667 0 0.0166667 0.05 0.0166667 0 0.933333 0.0666667 0.833333 0.0666667 0.0333333 0.0333333 0.966667 0 0 1 0 0 0 0.05 0.916667 0.0166667 0.0166667 0.166667 0 0 0.833333 0.0833333 0.0166667 0.9 0 0 0.0166667 0.0166667 0.966667 0 0.0166667 0.966667 0.0166667 0.116667 0.166667 0.483333 0.233333 0.0666667 0.0833333 0.05 0.8 Reverse Complement Motif 0.8 0.0833333 0.05 0.0666667 0.116667 0.483333 0.166667 0.233333 0 0.966667 0.0166667 0.0166667 0.966667 0.0166667 0.0166667 0 0.0833333 0.9 0.0166667 0 0.833333 0 0 0.166667 0.05 0.0166667 0.916667 0.0166667 0 0 0 1 0.0333333 0 0.966667 0 0.0666667 0.0666667 0.833333 0.0333333 0.933333 0.0166667 0 0.05 0.0166667 0 0.966667 0.0166667 0.05 0.833333 0 0.116667 0.85 0.0333333 0.0666667 0.05 0.166667 0.633333 0.116667 0.0833333 0.15 0.15 0.05 0.65 0.15 0.0166667 0.7 0.133333 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 76 CAcCACAGTGGAGCAct Reverse Complement Reverse Complement Backward 4 11 0.0795455 Original Motif 0.078125 0.734375 0.046875 0.140625 0.828125 0.046875 0.078125 0.046875 0.203125 0.484375 0.15625 0.15625 0.015625 0.984375 0 0 0.96875 0.015625 0.015625 0 0 0.90625 0.015625 0.078125 0.859375 0 0 0.140625 0.03125 0 0.90625 0.0625 0 0.015625 0 0.984375 0 0 0.96875 0.03125 0.046875 0.0625 0.8125 0.078125 0.9375 0.015625 0.015625 0.03125 0.015625 0.03125 0.921875 0.03125 0.125 0.796875 0 0.078125 0.875 0.046875 0.046875 0.03125 0.09375 0.65625 0.09375 0.15625 0.15625 0.078125 0.109375 0.65625 Reverse Complement Motif 0.65625 0.078125 0.109375 0.15625 0.09375 0.09375 0.65625 0.15625 0.03125 0.046875 0.046875 0.875 0.125 0 0.796875 0.078125 0.015625 0.921875 0.03125 0.03125 0.03125 0.015625 0.015625 0.9375 0.046875 0.8125 0.0625 0.078125 0 0.96875 0 0.03125 0.984375 0.015625 0 0 0.03125 0.90625 0 0.0625 0.140625 0 0 0.859375 0 0.015625 0.90625 0.078125 0 0.015625 0.015625 0.96875 0.015625 0 0.984375 0 0.203125 0.15625 0.484375 0.15625 0.046875 0.046875 0.078125 0.828125 0.078125 0.046875 0.734375 0.140625 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 77 AgTGCTCCACTGTGgTGTCACAgT Original Motif Reverse Complement Backward 4 11 0.0797055 Original Motif 0.690141 0.126761 0.0422535 0.140845 0.169014 0.0985915 0.676056 0.056338 0.0422535 0.028169 0.028169 0.901408 0.056338 0 0.774648 0.169014 0.0422535 0.887324 0.0422535 0.028169 0 0.0140845 0 0.985915 0.056338 0.830986 0.0422535 0.0704225 0.028169 0.957746 0.0140845 0 0.957746 0 0.0140845 0.028169 0.084507 0.84507 0.0140845 0.056338 0.028169 0.0140845 0 0.957746 0.140845 0.028169 0.802817 0.028169 0.0140845 0.0140845 0.0140845 0.957746 0.0140845 0 0.929577 0.056338 0.056338 0.15493 0.619718 0.169014 0.0140845 0.028169 0 0.957746 0.056338 0.0140845 0.873239 0.056338 0.0140845 0 0 0.985915 0.0422535 0.929577 0 0.028169 0.957746 0.028169 0 0.0140845 0.028169 0.84507 0.028169 0.0985915 0.873239 0.0140845 0.0422535 0.0704225 0.0985915 0.15493 0.56338 0.183099 0.0704225 0.0140845 0.112676 0.802817 Reverse Complement Motif 0.802817 0.0140845 0.112676 0.0704225 0.0985915 0.56338 0.15493 0.183099 0.0704225 0.0140845 0.0422535 0.873239 0.028169 0.028169 0.84507 0.0985915 0.0140845 0.028169 0 0.957746 0.0422535 0 0.929577 0.028169 0.985915 0 0 0.0140845 0.056338 0.873239 0.0140845 0.056338 0.957746 0.028169 0 0.0140845 0.056338 0.619718 0.15493 0.169014 0.0140845 0.929577 0 0.056338 0.957746 0.0140845 0.0140845 0.0140845 0.140845 0.802817 0.028169 0.028169 0.957746 0.0140845 0 0.028169 0.084507 0.0140845 0.84507 0.056338 0.028169 0 0.0140845 0.957746 0.028169 0.0140845 0.957746 0 0.056338 0.0422535 0.830986 0.0704225 0.985915 0.0140845 0 0 0.0422535 0.0422535 0.887324 0.028169 0.056338 0.774648 0 0.169014 0.901408 0.028169 0.028169 0.0422535 0.169014 0.676056 0.0985915 0.056338 0.140845 0.126761 0.0422535 0.690141 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 72 CACTGTGrYrtCACAGTGswsCAcT Reverse Complement Reverse Complement Forward 4 11 0.0894661 Original Motif 0.111111 0.746032 0.0634921 0.0793651 0.857143 0.047619 0.047619 0.047619 0.047619 0.857143 0.0793651 0.015873 0.031746 0 0 0.968254 0.031746 0.015873 0.904762 0.047619 0 0 0 1 0.031746 0 0.857143 0.111111 0.396825 0.111111 0.412698 0.0793651 0.031746 0.253968 0.015873 0.698413 0.365079 0 0.634921 0 0.0793651 0.206349 0.047619 0.666667 0.047619 0.936508 0.015873 0 0.952381 0 0.015873 0.031746 0.015873 0.920635 0 0.0634921 0.920635 0 0 0.0793651 0.0634921 0.047619 0.84127 0.047619 0 0 0.015873 0.984127 0.047619 0.015873 0.904762 0.031746 0.015873 0.603175 0.31746 0.0634921 0.396825 0 0.015873 0.587302 0.015873 0.47619 0.428571 0.0793651 0.0634921 0.920635 0 0.015873 0.920635 0.015873 0.047619 0.015873 0.0952381 0.68254 0.0952381 0.126984 0.047619 0.015873 0.0952381 0.84127 Reverse Complement Motif 0.84127 0.015873 0.0952381 0.047619 0.0952381 0.0952381 0.68254 0.126984 0.015873 0.015873 0.047619 0.920635 0.0634921 0 0.920635 0.015873 0.015873 0.428571 0.47619 0.0793651 0.587302 0 0.015873 0.396825 0.015873 0.31746 0.603175 0.0634921 0.047619 0.904762 0.015873 0.031746 0.984127 0 0.015873 0 0.0634921 0.84127 0.047619 0.047619 0.0793651 0 0 0.920635 0.015873 0 0.920635 0.0634921 0.031746 0 0.015873 0.952381 0.047619 0.015873 0.936508 0 0.666667 0.206349 0.047619 0.0793651 0.365079 0.634921 0 0 0.698413 0.253968 0.015873 0.031746 0.396825 0.412698 0.111111 0.0793651 0.031746 0.857143 0 0.111111 1 0 0 0 0.031746 0.904762 0.015873 0.047619 0.968254 0 0 0.031746 0.047619 0.0793651 0.857143 0.015873 0.047619 0.047619 0.047619 0.857143 0.111111 0.0634921 0.746032 0.0793651 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 73 TGGAGCACTGTGACAcCACAGTGg Original Motif Reverse Complement Forward 13 11 0.10258 Original Motif 0.0540541 0.0405405 0.0540541 0.851351 0.0405405 0.0135135 0.824324 0.121622 0.0945946 0.135135 0.756757 0.0135135 0.891892 0 0 0.108108 0.0405405 0.0945946 0.810811 0.0540541 0.0810811 0.797297 0.0540541 0.0675676 0.932432 0.027027 0 0.0405405 0.0540541 0.756757 0.135135 0.0540541 0.108108 0.027027 0.0135135 0.851351 0.108108 0 0.851351 0.0405405 0.0135135 0 0.027027 0.959459 0 0.0135135 0.945946 0.0405405 0.905405 0 0.0675676 0.027027 0.0540541 0.837838 0 0.108108 0.945946 0.0135135 0.0405405 0 0.162162 0.5 0.189189 0.148649 0.108108 0.824324 0 0.0675676 0.945946 0 0.0405405 0.0135135 0.0810811 0.837838 0.027027 0.0540541 0.945946 0 0.0135135 0.0405405 0.0540541 0.0675676 0.783784 0.0945946 0.0540541 0.027027 0 0.918919 0.0405405 0.0135135 0.864865 0.0810811 0.148649 0.121622 0.675676 0.0540541 Reverse Complement Motif 0.148649 0.675676 0.121622 0.0540541 0.0405405 0.864865 0.0135135 0.0810811 0.918919 0.027027 0 0.0540541 0.0540541 0.783784 0.0675676 0.0945946 0.0405405 0 0.0135135 0.945946 0.0810811 0.027027 0.837838 0.0540541 0.0135135 0 0.0405405 0.945946 0.108108 0 0.824324 0.0675676 0.162162 0.189189 0.5 0.148649 0 0.0135135 0.0405405 0.945946 0.0540541 0 0.837838 0.108108 0.027027 0 0.0675676 0.905405 0 0.945946 0.0135135 0.0405405 0.959459 0 0.027027 0.0135135 0.108108 0.851351 0 0.0405405 0.851351 0.027027 0.0135135 0.108108 0.0540541 0.135135 0.756757 0.0540541 0.0405405 0.027027 0 0.932432 0.0810811 0.0540541 0.797297 0.0675676 0.0405405 0.810811 0.0945946 0.0540541 0.108108 0 0 0.891892 0.0945946 0.756757 0.135135 0.0135135 0.0405405 0.824324 0.0135135 0.121622 0.851351 0.0405405 0.0540541 0.0540541 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 67 TgTGgTGTCACAGTGCTCC Original Motif Original Motif Forward 9 11 0.107008 Original Motif 0.111111 0.0833333 0.0555556 0.75 0.125 0.0972222 0.652778 0.125 0.0416667 0.0972222 0.0277778 0.833333 0.0277778 0.0277778 0.791667 0.152778 0.0555556 0.166667 0.652778 0.125 0 0.0416667 0.0138889 0.944444 0.0416667 0 0.888889 0.0694444 0.0277778 0.0277778 0 0.944444 0.0416667 0.944444 0.0138889 0 0.916667 0.0277778 0 0.0555556 0.0694444 0.875 0 0.0555556 0.833333 0.0138889 0.0138889 0.138889 0.0416667 0.0694444 0.819444 0.0694444 0.0277778 0.0277778 0.0277778 0.916667 0.0694444 0.0138889 0.847222 0.0694444 0.0694444 0.777778 0.0277778 0.125 0.0555556 0.0416667 0.0277778 0.875 0.0416667 0.708333 0.125 0.125 0.111111 0.819444 0.0555556 0.0138889 Reverse Complement Motif 0.111111 0.0555556 0.819444 0.0138889 0.0416667 0.125 0.708333 0.125 0.875 0.0416667 0.0277778 0.0555556 0.0694444 0.0277778 0.777778 0.125 0.0694444 0.847222 0.0138889 0.0694444 0.916667 0.0277778 0.0277778 0.0277778 0.0416667 0.819444 0.0694444 0.0694444 0.138889 0.0138889 0.0138889 0.833333 0.0694444 0 0.875 0.0555556 0.0555556 0.0277778 0 0.916667 0.0416667 0.0138889 0.944444 0 0.944444 0.0277778 0 0.0277778 0.0416667 0.888889 0 0.0694444 0.944444 0.0416667 0.0138889 0 0.0555556 0.652778 0.166667 0.125 0.0277778 0.791667 0.0277778 0.152778 0.833333 0.0972222 0.0277778 0.0416667 0.125 0.652778 0.0972222 0.125 0.75 0.0833333 0.0555556 0.111111 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 57 REST Original Motif Original Motif Forward 8 11 0.110715 Original Motif 0.132621 0.109365 0.230044 0.52797 0.0363181 0.168441 0.0914214 0.70382 0.0475892 0.855354 0.0313087 0.0657483 0.906367 0.0187266 0.0586767 0.0162297 0.021197 0.0274314 0.945137 0.00623441 0.0760125 0.609346 0.201246 0.113396 0.980697 0.00435866 0.00747198 0.00747198 0.001868 0.987547 0.00747198 0.00311333 0.0217933 0.922167 0.0124533 0.0435866 0.568847 0.125234 0.100935 0.204984 0.136534 0.233791 0.0773067 0.552369 0.0243142 0.00436409 0.966958 0.00436409 0.0124688 0.00311721 0.983167 0.00124688 0.877105 0.069869 0.0212102 0.0318153 0.008125 0.8 0.145625 0.04625 0.98375 0.005625 0.004375 0.00625 0.0263488 0.00815558 0.959849 0.00564617 0.128688 0.632141 0.114878 0.124294 0.229899 0.0194724 0.432161 0.318467 0.133962 0.586792 0.200629 0.0786164 0.112579 0.700629 0.0232704 0.163522 Reverse Complement Motif 0.112579 0.0232704 0.700629 0.163522 0.133962 0.200629 0.586792 0.0786164 0.229899 0.432161 0.0194724 0.318467 0.128688 0.114878 0.632141 0.124294 0.0263488 0.959849 0.00815558 0.00564617 0.00625 0.005625 0.004375 0.98375 0.008125 0.145625 0.8 0.04625 0.0318153 0.069869 0.0212102 0.877105 0.0124688 0.983167 0.00311721 0.00124688 0.0243142 0.966958 0.00436409 0.00436409 0.552369 0.233791 0.0773067 0.136534 0.204984 0.125234 0.100935 0.568847 0.0217933 0.0124533 0.922167 0.0435866 0.001868 0.00747198 0.987547 0.00311333 0.00747198 0.00435866 0.00747198 0.980697 0.0760125 0.201246 0.609346 0.113396 0.021197 0.945137 0.0274314 0.00623441 0.0162297 0.0187266 0.0586767 0.906367 0.0475892 0.0313087 0.855354 0.0657483 0.70382 0.168441 0.0914214 0.0363181 0.52797 0.109365 0.230044 0.132621 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 15 Motif 15 Original Motif Original Motif Forward 1 11 0.113636 Original Motif 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0.5 0 0.5 0 0 0 0 1 0.5 0.5 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 1 1 0 0 0 Reverse Complement Motif 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0.5 0 0.5 1 0 0 0 0 0 0.5 0.5 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 4 Motif 4 Original Motif Original Motif Backward 4 11 0.120455 Original Motif 0.45 0.25 0 0.3 0.8 0 0 0.2 0.85 0 0.15 0 1 0 0 0 0.75 0 0.25 0 0.4 0.3 0.05 0.25 0.85 0.1 0 0.05 0.85 0.15 0 0 1 0 0 0 0.5 0.1 0.4 0 0.35 0.65 0 0 0.9 0 0.05 0.05 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 0.05 0 0.05 0.9 0.35 0 0.65 0 0 0.1 0.4 0.5 0 0 0 1 0 0.15 0 0.85 0.05 0.1 0 0.85 0.25 0.3 0.05 0.4 0 0 0.25 0.75 0 0 0 1 0 0 0.15 0.85 0.2 0 0 0.8 0.3 0.25 0 0.45 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # 1 Motif ID 19 Motif Name Motif 19 Original Motif 1 0 0 0 0 0 1 0 1 0 0 0 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 Reserve Complement Motif 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 1 0 1 0 0 0 0 0 1 ************************************************************************ Best Matches for Motif ID 19 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 43 Motif 43 Reverse Complement Reverse Complement Forward 4 8 0.046875 Original Motif 1 0 0 0 1 0 0 0 0 0 0.5 0.5 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 1 0 0 0 0.5 0 0.5 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 44 Motif 44 Reverse Complement Reverse Complement Forward 3 8 0.078125 Original Motif 1 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0.5 0.5 1 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 1 0 0 0 1 0 0.5 0 0.5 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 16 Motif 16 Original Motif Reverse Complement Backward 4 8 0.078125 Original Motif 0 0 0 1 0 1 0 0 0 0 0 1 0 0 0.5 0.5 0 0 0 1 0 0 1 0 0 0 0 1 0 1 0 0 1 0 0 0 1 0 0 0 0.5 0 0 0.5 1 0 0 0 Reverse Complement Motif 0 0 0 1 0.5 0 0 0.5 0 0 0 1 0 0 0 1 0 0 1 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0.5 0 0.5 1 0 0 0 0 0 1 0 1 0 0 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 21 Motif 21 Reverse Complement Original Motif Backward 2 8 0.078125 Original Motif 0 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 0.5 0.5 0 0 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 0 0.5 0 0.5 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 2 49 Motif 49 Original Motif Original Motif Forward 5 8 0.09375 Original Motif 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 Reverse Complement Motif 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 41 Motif 41 Reverse Complement Reverse Complement Forward 1 8 0.09375 Original Motif 0 0 0 1 0 0 1 0 0 0 1 0 1 0 0 0 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 1 0 0 1 0 0 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 15 Motif 15 Original Motif Original Motif Forward 3 8 0.09375 Original Motif 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0.5 0 0.5 0 0 0 0 1 0.5 0.5 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 1 1 0 0 0 Reverse Complement Motif 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0.5 0 0.5 1 0 0 0 0 0 0.5 0.5 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 94 TFM13 Original Motif Reverse Complement Forward 10 8 0.0959821 Original Motif 0.0714286 0.142857 0 0.785714 0.0714286 0.0714286 0 0.857143 0 0 0 1 0 0.0714286 0.285714 0.642857 0 0.142857 0 0.857143 0 0 0 1 0.0714286 0 0.0714286 0.857143 0.142857 0 0.357143 0.5 0.0714286 0 0 0.928571 0 0.0714286 0 0.928571 0 0 0.357143 0.642857 0 0 0 1 0 0 0.214286 0.785714 0.142857 0 0 0.857143 0.571429 0.0714286 0.214286 0.142857 0.857143 0 0 0.142857 0.142857 0 0.285714 0.571429 0 0.0714286 0.285714 0.642857 0.357143 0.357143 0.0714286 0.214286 0.428571 0 0.0714286 0.5 Reverse Complement Motif 0.5 0 0.0714286 0.428571 0.214286 0.357143 0.0714286 0.357143 0.642857 0.0714286 0.285714 0 0.571429 0 0.285714 0.142857 0.142857 0 0 0.857143 0.142857 0.0714286 0.214286 0.571429 0.857143 0 0 0.142857 0.785714 0 0.214286 0 1 0 0 0 0.642857 0 0.357143 0 0.928571 0.0714286 0 0 0.928571 0 0 0.0714286 0.5 0 0.357143 0.142857 0.857143 0 0.0714286 0.0714286 1 0 0 0 0.857143 0.142857 0 0 0.642857 0.0714286 0.285714 0 1 0 0 0 0.857143 0.0714286 0 0.0714286 0.785714 0.142857 0 0.0714286 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 60 NR1H2RXRA Original Motif Original Motif Forward 4 8 0.09625 Original Motif 0.68 0.2 0 0.12 0.68 0.04 0.2 0.08 0.8 0 0.2 0 0 0 1 0 0 0 0.96 0.04 0 0 0 1 0 1 0 0 1 0 0 0 0.96 0 0 0.04 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 1 0 0 1 0 0 0 0.8 0.04 0.08 0.08 0 0.6 0.24 0.16 Reverse Complement Motif 0 0.24 0.6 0.16 0.08 0.04 0.08 0.8 0 0 0 1 0 0 1 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0.04 0 0 0.96 0 0 0 1 0 0 1 0 1 0 0 0 0 0.96 0 0.04 0 1 0 0 0 0 0.2 0.8 0.08 0.04 0.2 0.68 0.12 0.2 0 0.68 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 4 Motif 4 Original Motif Original Motif Forward 3 8 0.101562 Original Motif 0.45 0.25 0 0.3 0.8 0 0 0.2 0.85 0 0.15 0 1 0 0 0 0.75 0 0.25 0 0.4 0.3 0.05 0.25 0.85 0.1 0 0.05 0.85 0.15 0 0 1 0 0 0 0.5 0.1 0.4 0 0.35 0.65 0 0 0.9 0 0.05 0.05 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 0.05 0 0.05 0.9 0.35 0 0.65 0 0 0.1 0.4 0.5 0 0 0 1 0 0.15 0 0.85 0.05 0.1 0 0.85 0.25 0.3 0.05 0.4 0 0 0.25 0.75 0 0 0 1 0 0 0.15 0.85 0.2 0 0 0.8 0.3 0.25 0 0.45 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # 1 Motif ID 20 Motif Name Motif 20 Original Motif 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 0 Reserve Complement Motif 0 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 1 0 0 0 1 0 1 0 0 0 ************************************************************************ Best Matches for Motif ID 20 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 66 CTCF Original Motif Reverse Complement Backward 2 11 0.102062 Original Motif 0.0952903 0.318729 0.0832421 0.502738 0.182913 0.158817 0.45345 0.204819 0.307777 0.0536692 0.491785 0.146769 0.0613363 0.876232 0.0230011 0.0394304 0.00876232 0.989047 0 0.00219058 0.814896 0.0142388 0.0711939 0.0996714 0.0438116 0.578313 0.365827 0.0120482 0.117325 0.474781 0.0526316 0.355263 0.933114 0.0120614 0.0350877 0.0197368 0.00548847 0 0.991218 0.00329308 0.365532 0.00329308 0.621295 0.00987925 0.0592755 0.0131723 0.553238 0.374314 0.0131868 0 0.978022 0.00879121 0.0615385 0.00879121 0.851648 0.078022 0.114411 0.806381 0.00550055 0.0737074 0.409241 0.0143014 0.557756 0.0187019 0.0903084 0.530837 0.338106 0.0407489 0.128855 0.354626 0.0803965 0.436123 0.442731 0.199339 0.292952 0.064978 Reverse Complement Motif 0.064978 0.199339 0.292952 0.442731 0.436123 0.354626 0.0803965 0.128855 0.0903084 0.338106 0.530837 0.0407489 0.409241 0.557756 0.0143014 0.0187019 0.114411 0.00550055 0.806381 0.0737074 0.0615385 0.851648 0.00879121 0.078022 0.0131868 0.978022 0 0.00879121 0.0592755 0.553238 0.0131723 0.374314 0.365532 0.621295 0.00329308 0.00987925 0.00548847 0.991218 0 0.00329308 0.0197368 0.0120614 0.0350877 0.933114 0.117325 0.0526316 0.474781 0.355263 0.0438116 0.365827 0.578313 0.0120482 0.0996714 0.0142388 0.0711939 0.814896 0.00876232 0 0.989047 0.00219058 0.0613363 0.0230011 0.876232 0.0394304 0.307777 0.491785 0.0536692 0.146769 0.182913 0.45345 0.158817 0.204819 0.502738 0.318729 0.0832421 0.0952903 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 2 47 Motif 47 Original Motif Original Motif Forward 2 11 0.121753 Original Motif 0 0.5 0 0.5 0 0 1 0 0 1 0 0 0 1 0 0 0.714286 0.285714 0 0 0 0.857143 0 0.142857 0 1 0 0 0 0.142857 0.142857 0.714286 0.357143 0 0.357143 0.285714 0 0.428571 0.571429 0 0.142857 0.071429 0 0.785714 0 0 1 0 0.071429 0 0.785714 0.142857 0.142857 0.428571 0 0.428571 Reverse Complement Motif 0.142857 0 0.428571 0.428571 0.071429 0.785714 0 0.142857 0 1 0 0 0.785714 0.071429 0 0.142857 0 0.571429 0.428571 0 0.285714 0 0.357143 0.357143 0.714286 0.142857 0.142857 0 0 0 1 0 0 0 0.857143 0.142857 0 0.285714 0 0.714286 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0.5 0.5 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 21 Motif 21 Reverse Complement Reverse Complement Backward 2 11 0.125 Original Motif 0 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 0.5 0.5 0 0 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 0 0.5 0 0.5 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 23 Motif 23 Reverse Complement Reverse Complement Forward 1 11 0.125 Original Motif 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0.5 0 0 0.5 0 0 0 1 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0.5 0.5 0 0 1 0 0 0 0 0 0 1 Reverse Complement Motif 1 0 0 0 0 0 0 1 0 0.5 0 0.5 1 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 1 0 0 0 0.5 0 0 0.5 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 56 Mycn Original Motif Reverse Complement Forward 1 10 0.612329 Original Motif 0.349315 0.363014 0.143836 0.143836 0.0890411 0.388128 0.447489 0.0753425 0.0159817 0.984018 0 0 0.945205 0 0.0410959 0.0136986 0 0.961187 0.0182648 0.0205479 0.0707763 0.00228311 0.924658 0.00228311 0.0547945 0.221461 0.00456621 0.719178 0 0 0.938356 0.0616438 0.0616438 0.111872 0.739726 0.086758 0.139269 0.605023 0.0913242 0.164384 Reverse Complement Motif 0.139269 0.0913242 0.605023 0.164384 0.0616438 0.739726 0.111872 0.086758 0 0.938356 0 0.0616438 0.719178 0.221461 0.00456621 0.0547945 0.0707763 0.924658 0.00228311 0.00228311 0 0.0182648 0.961187 0.0205479 0.0136986 0 0.0410959 0.945205 0.0159817 0 0.984018 0 0.0890411 0.447489 0.388128 0.0753425 0.349315 0.143836 0.363014 0.143836 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 27 Motif 27 Reverse Complement Original Motif Forward 2 10 0.6125 Original Motif 1 0 0 0 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0.5 0 0.5 0 1 0 0 0 1 0 0 0 0 0 1 0 Reverse Complement Motif 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0.5 0.5 1 0 0 0 0 1 0 0 1 0 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 58 Myc Original Motif Reverse Complement Forward 1 10 0.615419 Original Motif 0.295154 0.422907 0.15859 0.123348 0.14978 0.23348 0.572687 0.0440529 0.0352423 0.964758 0 0 0.955947 0.0176211 0.0220264 0.00440529 0 0.933921 0.0132159 0.0528634 0.0837004 0.00881057 0.898678 0.00881057 0.0396476 0.193833 0 0.76652 0 0.00881057 0.951542 0.0396476 0 0.0748899 0.806167 0.118943 0.198238 0.471366 0.105727 0.22467 Reverse Complement Motif 0.198238 0.105727 0.471366 0.22467 0 0.806167 0.0748899 0.118943 0 0.951542 0.00881057 0.0396476 0.76652 0.193833 0 0.0396476 0.0837004 0.898678 0.00881057 0.00881057 0 0.0132159 0.933921 0.0528634 0.00440529 0.0176211 0.0220264 0.955947 0.0352423 0 0.964758 0 0.14978 0.572687 0.23348 0.0440529 0.295154 0.15859 0.422907 0.123348 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 57 REST Reverse Complement Original Motif Backward 12 10 0.62065 Original Motif 0.132621 0.109365 0.230044 0.52797 0.0363181 0.168441 0.0914214 0.70382 0.0475892 0.855354 0.0313087 0.0657483 0.906367 0.0187266 0.0586767 0.0162297 0.021197 0.0274314 0.945137 0.00623441 0.0760125 0.609346 0.201246 0.113396 0.980697 0.00435866 0.00747198 0.00747198 0.001868 0.987547 0.00747198 0.00311333 0.0217933 0.922167 0.0124533 0.0435866 0.568847 0.125234 0.100935 0.204984 0.136534 0.233791 0.0773067 0.552369 0.0243142 0.00436409 0.966958 0.00436409 0.0124688 0.00311721 0.983167 0.00124688 0.877105 0.069869 0.0212102 0.0318153 0.008125 0.8 0.145625 0.04625 0.98375 0.005625 0.004375 0.00625 0.0263488 0.00815558 0.959849 0.00564617 0.128688 0.632141 0.114878 0.124294 0.229899 0.0194724 0.432161 0.318467 0.133962 0.586792 0.200629 0.0786164 0.112579 0.700629 0.0232704 0.163522 Reverse Complement Motif 0.112579 0.0232704 0.700629 0.163522 0.133962 0.200629 0.586792 0.0786164 0.229899 0.432161 0.0194724 0.318467 0.128688 0.114878 0.632141 0.124294 0.0263488 0.959849 0.00815558 0.00564617 0.00625 0.005625 0.004375 0.98375 0.008125 0.145625 0.8 0.04625 0.0318153 0.069869 0.0212102 0.877105 0.0124688 0.983167 0.00311721 0.00124688 0.0243142 0.966958 0.00436409 0.00436409 0.552369 0.233791 0.0773067 0.136534 0.204984 0.125234 0.100935 0.568847 0.0217933 0.0124533 0.922167 0.0435866 0.001868 0.00747198 0.987547 0.00311333 0.00747198 0.00435866 0.00747198 0.980697 0.0760125 0.201246 0.609346 0.113396 0.021197 0.945137 0.0274314 0.00623441 0.0162297 0.0187266 0.0586767 0.906367 0.0475892 0.0313087 0.855354 0.0657483 0.70382 0.168441 0.0914214 0.0363181 0.52797 0.109365 0.230044 0.132621 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 81 ctatacggacg Reverse Complement Original Motif Forward 2 10 0.625 Original Motif 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 1 0 0 0 0 1 0 0 0 0 1 0 Reverse Complement Motif 0 1 0 0 0 0 1 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 0 0 0 1 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 30 Motif 30 Original Motif Original Motif Forward 2 10 0.625 Original Motif 0 0 0 1 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 Reverse Complement Motif 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 1 0 0 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # 1 Motif ID 21 Motif Name Motif 21 Original Motif 0 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 0.5 0.5 0 0 1 0 0 0 1 0 0 0 Reserve Complement Motif 0 0 0 1 0 0 0 1 0 0.5 0 0.5 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 ************************************************************************ Best Matches for Motif ID 21 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 22 Motif 22 Reverse Complement Original Motif Forward 3 12 0.075 Original Motif 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 1 Reverse Complement Motif 1 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 91 TFM3 Reverse Complement Reverse Complement Backward 6 12 0.0854167 Original Motif 0.0625 0.0625 0.3125 0.5625 0.125 0.0625 0 0.8125 0 0 0.0625 0.9375 0 0 0.1875 0.8125 0 0 0.125 0.875 0 0.25 0 0.75 0 0 0.125 0.875 0.1875 0 0.4375 0.375 0 0 0.125 0.875 0 0.125 0 0.875 0 0.0625 0 0.9375 0.125 0 0 0.875 0.125 0.0625 0 0.8125 0 0 0.25 0.75 0.25 0 0.375 0.375 0.9375 0.0625 0 0 0.9375 0 0 0.0625 0 0.3125 0.4375 0.25 Reverse Complement Motif 0 0.4375 0.3125 0.25 0.0625 0 0 0.9375 0 0.0625 0 0.9375 0.25 0.375 0 0.375 0.75 0 0.25 0 0.8125 0.0625 0 0.125 0.875 0 0 0.125 0.9375 0.0625 0 0 0.875 0.125 0 0 0.875 0 0.125 0 0.1875 0.4375 0 0.375 0.875 0 0.125 0 0.75 0.25 0 0 0.875 0 0.125 0 0.8125 0 0.1875 0 0.9375 0 0.0625 0 0.8125 0.0625 0 0.125 0.5625 0.0625 0.3125 0.0625 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 57 REST Original Motif Reverse Complement Forward 2 12 0.0868982 Original Motif 0.132621 0.109365 0.230044 0.52797 0.0363181 0.168441 0.0914214 0.70382 0.0475892 0.855354 0.0313087 0.0657483 0.906367 0.0187266 0.0586767 0.0162297 0.021197 0.0274314 0.945137 0.00623441 0.0760125 0.609346 0.201246 0.113396 0.980697 0.00435866 0.00747198 0.00747198 0.001868 0.987547 0.00747198 0.00311333 0.0217933 0.922167 0.0124533 0.0435866 0.568847 0.125234 0.100935 0.204984 0.136534 0.233791 0.0773067 0.552369 0.0243142 0.00436409 0.966958 0.00436409 0.0124688 0.00311721 0.983167 0.00124688 0.877105 0.069869 0.0212102 0.0318153 0.008125 0.8 0.145625 0.04625 0.98375 0.005625 0.004375 0.00625 0.0263488 0.00815558 0.959849 0.00564617 0.128688 0.632141 0.114878 0.124294 0.229899 0.0194724 0.432161 0.318467 0.133962 0.586792 0.200629 0.0786164 0.112579 0.700629 0.0232704 0.163522 Reverse Complement Motif 0.112579 0.0232704 0.700629 0.163522 0.133962 0.200629 0.586792 0.0786164 0.229899 0.432161 0.0194724 0.318467 0.128688 0.114878 0.632141 0.124294 0.0263488 0.959849 0.00815558 0.00564617 0.00625 0.005625 0.004375 0.98375 0.008125 0.145625 0.8 0.04625 0.0318153 0.069869 0.0212102 0.877105 0.0124688 0.983167 0.00311721 0.00124688 0.0243142 0.966958 0.00436409 0.00436409 0.552369 0.233791 0.0773067 0.136534 0.204984 0.125234 0.100935 0.568847 0.0217933 0.0124533 0.922167 0.0435866 0.001868 0.00747198 0.987547 0.00311333 0.00747198 0.00435866 0.00747198 0.980697 0.0760125 0.201246 0.609346 0.113396 0.021197 0.945137 0.0274314 0.00623441 0.0162297 0.0187266 0.0586767 0.906367 0.0475892 0.0313087 0.855354 0.0657483 0.70382 0.168441 0.0914214 0.0363181 0.52797 0.109365 0.230044 0.132621 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 71 AmTGTGACACCACAGT Original Motif Reverse Complement Backward 2 12 0.0938802 Original Motif 0.703125 0.1875 0.015625 0.09375 0.265625 0.5 0.125 0.109375 0.015625 0.046875 0.03125 0.90625 0.078125 0.015625 0.890625 0.015625 0 0 0 1 0 0.03125 0.90625 0.0625 0.953125 0 0.015625 0.03125 0.046875 0.890625 0 0.0625 0.96875 0 0.015625 0.015625 0.109375 0.78125 0.0625 0.046875 0.0625 0.890625 0 0.046875 0.953125 0 0.03125 0.015625 0.03125 0.78125 0.046875 0.140625 0.9375 0.015625 0.03125 0.015625 0.09375 0.078125 0.734375 0.09375 0.03125 0.078125 0 0.890625 Reverse Complement Motif 0.890625 0.078125 0 0.03125 0.09375 0.734375 0.078125 0.09375 0.015625 0.015625 0.03125 0.9375 0.03125 0.046875 0.78125 0.140625 0.015625 0 0.03125 0.953125 0.0625 0 0.890625 0.046875 0.109375 0.0625 0.78125 0.046875 0.015625 0 0.015625 0.96875 0.046875 0 0.890625 0.0625 0.03125 0 0.015625 0.953125 0 0.90625 0.03125 0.0625 1 0 0 0 0.078125 0.890625 0.015625 0.015625 0.90625 0.046875 0.03125 0.015625 0.265625 0.125 0.5 0.109375 0.09375 0.1875 0.015625 0.703125 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 77 AgTGCTCCACTGTGgTGTCACAgT Original Motif Original Motif Backward 2 12 0.0952465 Original Motif 0.690141 0.126761 0.0422535 0.140845 0.169014 0.0985915 0.676056 0.056338 0.0422535 0.028169 0.028169 0.901408 0.056338 0 0.774648 0.169014 0.0422535 0.887324 0.0422535 0.028169 0 0.0140845 0 0.985915 0.056338 0.830986 0.0422535 0.0704225 0.028169 0.957746 0.0140845 0 0.957746 0 0.0140845 0.028169 0.084507 0.84507 0.0140845 0.056338 0.028169 0.0140845 0 0.957746 0.140845 0.028169 0.802817 0.028169 0.0140845 0.0140845 0.0140845 0.957746 0.0140845 0 0.929577 0.056338 0.056338 0.15493 0.619718 0.169014 0.0140845 0.028169 0 0.957746 0.056338 0.0140845 0.873239 0.056338 0.0140845 0 0 0.985915 0.0422535 0.929577 0 0.028169 0.957746 0.028169 0 0.0140845 0.028169 0.84507 0.028169 0.0985915 0.873239 0.0140845 0.0422535 0.0704225 0.0985915 0.15493 0.56338 0.183099 0.0704225 0.0140845 0.112676 0.802817 Reverse Complement Motif 0.802817 0.0140845 0.112676 0.0704225 0.0985915 0.56338 0.15493 0.183099 0.0704225 0.0140845 0.0422535 0.873239 0.028169 0.028169 0.84507 0.0985915 0.0140845 0.028169 0 0.957746 0.0422535 0 0.929577 0.028169 0.985915 0 0 0.0140845 0.056338 0.873239 0.0140845 0.056338 0.957746 0.028169 0 0.0140845 0.056338 0.619718 0.15493 0.169014 0.0140845 0.929577 0 0.056338 0.957746 0.0140845 0.0140845 0.0140845 0.140845 0.802817 0.028169 0.028169 0.957746 0.0140845 0 0.028169 0.084507 0.0140845 0.84507 0.056338 0.028169 0 0.0140845 0.957746 0.028169 0.0140845 0.957746 0 0.056338 0.0422535 0.830986 0.0704225 0.985915 0.0140845 0 0 0.0422535 0.0422535 0.887324 0.028169 0.056338 0.774648 0 0.169014 0.901408 0.028169 0.028169 0.0422535 0.169014 0.676056 0.0985915 0.056338 0.140845 0.126761 0.0422535 0.690141 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 73 TGGAGCACTGTGACAcCACAGTGg Original Motif Reverse Complement Forward 6 12 0.0978041 Original Motif 0.0540541 0.0405405 0.0540541 0.851351 0.0405405 0.0135135 0.824324 0.121622 0.0945946 0.135135 0.756757 0.0135135 0.891892 0 0 0.108108 0.0405405 0.0945946 0.810811 0.0540541 0.0810811 0.797297 0.0540541 0.0675676 0.932432 0.027027 0 0.0405405 0.0540541 0.756757 0.135135 0.0540541 0.108108 0.027027 0.0135135 0.851351 0.108108 0 0.851351 0.0405405 0.0135135 0 0.027027 0.959459 0 0.0135135 0.945946 0.0405405 0.905405 0 0.0675676 0.027027 0.0540541 0.837838 0 0.108108 0.945946 0.0135135 0.0405405 0 0.162162 0.5 0.189189 0.148649 0.108108 0.824324 0 0.0675676 0.945946 0 0.0405405 0.0135135 0.0810811 0.837838 0.027027 0.0540541 0.945946 0 0.0135135 0.0405405 0.0540541 0.0675676 0.783784 0.0945946 0.0540541 0.027027 0 0.918919 0.0405405 0.0135135 0.864865 0.0810811 0.148649 0.121622 0.675676 0.0540541 Reverse Complement Motif 0.148649 0.675676 0.121622 0.0540541 0.0405405 0.864865 0.0135135 0.0810811 0.918919 0.027027 0 0.0540541 0.0540541 0.783784 0.0675676 0.0945946 0.0405405 0 0.0135135 0.945946 0.0810811 0.027027 0.837838 0.0540541 0.0135135 0 0.0405405 0.945946 0.108108 0 0.824324 0.0675676 0.162162 0.189189 0.5 0.148649 0 0.0135135 0.0405405 0.945946 0.0540541 0 0.837838 0.108108 0.027027 0 0.0675676 0.905405 0 0.945946 0.0135135 0.0405405 0.959459 0 0.027027 0.0135135 0.108108 0.851351 0 0.0405405 0.851351 0.027027 0.0135135 0.108108 0.0540541 0.135135 0.756757 0.0540541 0.0405405 0.027027 0 0.932432 0.0810811 0.0540541 0.797297 0.0675676 0.0405405 0.810811 0.0945946 0.0540541 0.108108 0 0 0.891892 0.0945946 0.756757 0.135135 0.0135135 0.0405405 0.824324 0.0135135 0.121622 0.851351 0.0405405 0.0540541 0.0540541 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 4 67 TgTGgTGTCACAGTGCTCC Original Motif Original Motif Backward 7 12 0.100752 Original Motif 0.111111 0.0833333 0.0555556 0.75 0.125 0.0972222 0.652778 0.125 0.0416667 0.0972222 0.0277778 0.833333 0.0277778 0.0277778 0.791667 0.152778 0.0555556 0.166667 0.652778 0.125 0 0.0416667 0.0138889 0.944444 0.0416667 0 0.888889 0.0694444 0.0277778 0.0277778 0 0.944444 0.0416667 0.944444 0.0138889 0 0.916667 0.0277778 0 0.0555556 0.0694444 0.875 0 0.0555556 0.833333 0.0138889 0.0138889 0.138889 0.0416667 0.0694444 0.819444 0.0694444 0.0277778 0.0277778 0.0277778 0.916667 0.0694444 0.0138889 0.847222 0.0694444 0.0694444 0.777778 0.0277778 0.125 0.0555556 0.0416667 0.0277778 0.875 0.0416667 0.708333 0.125 0.125 0.111111 0.819444 0.0555556 0.0138889 Reverse Complement Motif 0.111111 0.0555556 0.819444 0.0138889 0.0416667 0.125 0.708333 0.125 0.875 0.0416667 0.0277778 0.0555556 0.0694444 0.0277778 0.777778 0.125 0.0694444 0.847222 0.0138889 0.0694444 0.916667 0.0277778 0.0277778 0.0277778 0.0416667 0.819444 0.0694444 0.0694444 0.138889 0.0138889 0.0138889 0.833333 0.0694444 0 0.875 0.0555556 0.0555556 0.0277778 0 0.916667 0.0416667 0.0138889 0.944444 0 0.944444 0.0277778 0 0.0277778 0.0416667 0.888889 0 0.0694444 0.944444 0.0416667 0.0138889 0 0.0555556 0.652778 0.166667 0.125 0.0277778 0.791667 0.0277778 0.152778 0.833333 0.0972222 0.0277778 0.0416667 0.125 0.652778 0.0972222 0.125 0.75 0.0833333 0.0555556 0.111111 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 46 Motif 46 Original Motif Reverse Complement Forward 2 12 0.10625 Original Motif 1 0 0 0 0 0 0 1 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 1 0 0 0.5 0 0.5 1 0 0 0 0 0 0 1 1 0 0 0 Reverse Complement Motif 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0.5 0.5 0 1 0 0 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 23 Motif 23 Reverse Complement Reverse Complement Backward 1 12 0.10625 Original Motif 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0.5 0 0 0.5 0 0 0 1 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0.5 0.5 0 0 1 0 0 0 0 0 0 1 Reverse Complement Motif 1 0 0 0 0 0 0 1 0 0.5 0 0.5 1 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 1 0 0 0 0.5 0 0 0.5 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 43 Motif 43 Original Motif Reverse Complement Backward 1 11 0.583523 Original Motif 1 0 0 0 1 0 0 0 0 0 0.5 0.5 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 1 0 0 0 0.5 0 0.5 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # 1 Motif ID 22 Motif Name Motif 22 Original Motif 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 1 Reserve Complement Motif 1 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 ************************************************************************ Best Matches for Motif ID 22 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 23 Motif 23 Original Motif Reverse Complement Forward 1 14 0.125 Original Motif 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0.5 0 0 0.5 0 0 0 1 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0.5 0.5 0 0 1 0 0 0 0 0 0 1 Reverse Complement Motif 1 0 0 0 0 0 0 1 0 0.5 0 0.5 1 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 1 0 0 0 0.5 0 0 0.5 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 46 Motif 46 Original Motif Original Motif Backward 2 13 0.586538 Original Motif 1 0 0 0 0 0 0 1 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 1 0 0 0.5 0 0.5 1 0 0 0 0 0 0 1 1 0 0 0 Reverse Complement Motif 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0.5 0.5 0 1 0 0 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 33 Motif 33 Original Motif Original Motif Forward 2 13 0.625 Original Motif 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0.5 0 0.5 0 0 0 1 0 0 0 1 0 0 0 1 0.5 0 0 0.5 1 0 0 0 Reverse Complement Motif 0 0 0 1 0.5 0 0 0.5 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0.5 0.5 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 21 Motif 21 Original Motif Reverse Complement Forward 1 12 1.09375 Original Motif 0 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 0.5 0.5 0 0 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 0 0.5 0 0.5 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 3 60 NR1H2RXRA Original Motif Original Motif Forward 6 12 1.11167 Original Motif 0.68 0.2 0 0.12 0.68 0.04 0.2 0.08 0.8 0 0.2 0 0 0 1 0 0 0 0.96 0.04 0 0 0 1 0 1 0 0 1 0 0 0 0.96 0 0 0.04 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 1 0 0 1 0 0 0 0.8 0.04 0.08 0.08 0 0.6 0.24 0.16 Reverse Complement Motif 0 0.24 0.6 0.16 0.08 0.04 0.08 0.8 0 0 0 1 0 0 1 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0.04 0 0 0.96 0 0 0 1 0 0 1 0 1 0 0 0 0 0.96 0 0.04 0 1 0 0 0 0 0.2 0.8 0.08 0.04 0.2 0.68 0.12 0.2 0 0.68 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 15 Motif 15 Reverse Complement Original Motif Backward 2 12 1.11458 Original Motif 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0.5 0 0.5 0 0 0 0 1 0.5 0.5 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 1 1 0 0 0 Reverse Complement Motif 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0.5 0 0.5 1 0 0 0 0 0 0.5 0.5 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 31 Motif 31 Reverse Complement Reverse Complement Forward 1 11 1.61364 Original Motif 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 Reverse Complement Motif 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 17 Motif 17 Original Motif Reverse Complement Forward 1 11 1.61364 Original Motif 0 1 0 0 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 1 0 0 Reverse Complement Motif 0 0 1 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 1 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 27 Motif 27 Original Motif Original Motif Forward 1 11 1.61364 Original Motif 1 0 0 0 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0.5 0 0.5 0 1 0 0 0 1 0 0 0 0 0 1 0 Reverse Complement Motif 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0.5 0.5 1 0 0 0 0 1 0 0 1 0 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 24 Motif 24 Reverse Complement Original Motif Backward 1 11 1.625 Original Motif 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0.5 0 0 0.5 0 1 0 0 1 0 0 0 0 0 0 1 0.5 0 0 0.5 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 0.5 0 0 0.5 1 0 0 0 0 0 0 1 0 0 1 0 0.5 0 0 0.5 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # 1 Motif ID 23 Motif Name Motif 23 Original Motif 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0.5 0 0 0.5 0 0 0 1 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0.5 0.5 0 0 1 0 0 0 0 0 0 1 Reserve Complement Motif 1 0 0 0 0 0 0 1 0 0.5 0 0.5 1 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 1 0 0 0 0.5 0 0 0.5 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 ************************************************************************ Best Matches for Motif ID 23 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 2 49 Motif 49 Original Motif Reverse Complement Backward 1 14 0.0825893 Original Motif 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 Reverse Complement Motif 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 94 TFM13 Reverse Complement Reverse Complement Forward 4 14 0.0876913 Original Motif 0.0714286 0.142857 0 0.785714 0.0714286 0.0714286 0 0.857143 0 0 0 1 0 0.0714286 0.285714 0.642857 0 0.142857 0 0.857143 0 0 0 1 0.0714286 0 0.0714286 0.857143 0.142857 0 0.357143 0.5 0.0714286 0 0 0.928571 0 0.0714286 0 0.928571 0 0 0.357143 0.642857 0 0 0 1 0 0 0.214286 0.785714 0.142857 0 0 0.857143 0.571429 0.0714286 0.214286 0.142857 0.857143 0 0 0.142857 0.142857 0 0.285714 0.571429 0 0.0714286 0.285714 0.642857 0.357143 0.357143 0.0714286 0.214286 0.428571 0 0.0714286 0.5 Reverse Complement Motif 0.5 0 0.0714286 0.428571 0.214286 0.357143 0.0714286 0.357143 0.642857 0.0714286 0.285714 0 0.571429 0 0.285714 0.142857 0.142857 0 0 0.857143 0.142857 0.0714286 0.214286 0.571429 0.857143 0 0 0.142857 0.785714 0 0.214286 0 1 0 0 0 0.642857 0 0.357143 0 0.928571 0.0714286 0 0 0.928571 0 0 0.0714286 0.5 0 0.357143 0.142857 0.857143 0 0.0714286 0.0714286 1 0 0 0 0.857143 0.142857 0 0 0.642857 0.0714286 0.285714 0 1 0 0 0 0.857143 0.0714286 0 0.0714286 0.785714 0.142857 0 0.0714286 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 5 91 TFM3 Reverse Complement Reverse Complement Backward 4 14 0.0959821 Original Motif 0.0625 0.0625 0.3125 0.5625 0.125 0.0625 0 0.8125 0 0 0.0625 0.9375 0 0 0.1875 0.8125 0 0 0.125 0.875 0 0.25 0 0.75 0 0 0.125 0.875 0.1875 0 0.4375 0.375 0 0 0.125 0.875 0 0.125 0 0.875 0 0.0625 0 0.9375 0.125 0 0 0.875 0.125 0.0625 0 0.8125 0 0 0.25 0.75 0.25 0 0.375 0.375 0.9375 0.0625 0 0 0.9375 0 0 0.0625 0 0.3125 0.4375 0.25 Reverse Complement Motif 0 0.4375 0.3125 0.25 0.0625 0 0 0.9375 0 0.0625 0 0.9375 0.25 0.375 0 0.375 0.75 0 0.25 0 0.8125 0.0625 0 0.125 0.875 0 0 0.125 0.9375 0.0625 0 0 0.875 0.125 0 0 0.875 0 0.125 0 0.1875 0.4375 0 0.375 0.875 0 0.125 0 0.75 0.25 0 0 0.875 0 0.125 0 0.8125 0 0.1875 0 0.9375 0 0.0625 0 0.8125 0.0625 0 0.125 0.5625 0.0625 0.3125 0.0625 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 22 Motif 22 Original Motif Reverse Complement Forward 1 14 0.109375 Original Motif 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 1 Reverse Complement Motif 1 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 33 Motif 33 Original Motif Reverse Complement Forward 1 14 0.109375 Original Motif 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0.5 0 0.5 0 0 0 1 0 0 0 1 0 0 0 1 0.5 0 0 0.5 1 0 0 0 Reverse Complement Motif 0 0 0 1 0.5 0 0 0.5 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0.5 0.5 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 45 Motif 45 Original Motif Original Motif Forward 2 13 0.590144 Original Motif 0 0 0 1 1 0 0 0 1 0 0 0 0 0.5 0.5 0 0 0 0 1 0 1 0 0 0 0 0 1 0.5 0 0 0.5 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0.5 0 0 0.5 1 0 0 0 0 0 1 0 1 0 0 0 0 0.5 0.5 0 0 0 0 1 0 0 0 1 1 0 0 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 4 Motif 4 Reverse Complement Original Motif Forward 2 13 0.601683 Original Motif 0.45 0.25 0 0.3 0.8 0 0 0.2 0.85 0 0.15 0 1 0 0 0 0.75 0 0.25 0 0.4 0.3 0.05 0.25 0.85 0.1 0 0.05 0.85 0.15 0 0 1 0 0 0 0.5 0.1 0.4 0 0.35 0.65 0 0 0.9 0 0.05 0.05 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 0.05 0 0.05 0.9 0.35 0 0.65 0 0 0.1 0.4 0.5 0 0 0 1 0 0.15 0 0.85 0.05 0.1 0 0.85 0.25 0.3 0.05 0.4 0 0 0.25 0.75 0 0 0 1 0 0 0.15 0.85 0.2 0 0 0.8 0.3 0.25 0 0.45 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 15 Motif 15 Reverse Complement Original Motif Backward 1 13 0.609375 Original Motif 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0.5 0 0.5 0 0 0 0 1 0.5 0.5 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 1 1 0 0 0 Reverse Complement Motif 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0.5 0 0.5 1 0 0 0 0 0 0.5 0.5 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 46 Motif 46 Reverse Complement Reverse Complement Backward 3 12 1.09896 Original Motif 1 0 0 0 0 0 0 1 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 1 0 0 0.5 0 0.5 1 0 0 0 0 0 0 1 1 0 0 0 Reverse Complement Motif 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0.5 0.5 0 1 0 0 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 21 Motif 21 Original Motif Original Motif Forward 1 12 1.10938 Original Motif 0 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 0.5 0.5 0 0 1 0 0 0 1 0 0 0 Reverse Complement Motif 0 0 0 1 0 0 0 1 0 0.5 0 0.5 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # 1 Motif ID 24 Motif Name Motif 24 Original Motif 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0.5 0 0 0.5 0 1 0 0 1 0 0 0 0 0 0 1 0.5 0 0 0.5 1 0 0 0 1 0 0 0 Reserve Complement Motif 0 0 0 1 0 0 0 1 0.5 0 0 0.5 1 0 0 0 0 0 0 1 0 0 1 0 0.5 0 0 0.5 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 1 ************************************************************************ Best Matches for Motif ID 24 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif Name Matching Format of First Motif Matching Format of Second Motif Direction Position # # of Overlap Similarity Score 1 33 Motif 33 Reverse Complement Original Motif Backward 3 11 0.0340909 Original Motif 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0.5 0 0.5 0 0 0 1 0 0 0 1 0 0 0 1 0.5 0 0 0.5 1 0 0 0 Reverse Complement Motif 0 0 0 1 0.5 0 0 0.5 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0.5 0.5 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1