Version 2.1
Number of files: | 2 |
Number of top significant motifs: | 10 |
Number of best matches: | 10 |
Similarity cutoff >= | 0.75 |
Matching motif database: | UniProbe Mus Musculus |
Phylogenetic tree: | Yes |
Combined similar motifs: | Yes |
Output file type: | All |
Output file format: | All |
File name | Count of motifs | Dataset number |
PScanChIP_DM05.txt | 16 | 1 |
RSAT_peak-motifs_DM05.txt | 17 | 2 |
Dataset #: 1 | Motif ID: 1 | Motif name: HNF4A |
Original motif | Reverse complement motif |
Consensus sequence: RGGBCAAAGKYCA | Consensus sequence: TGMYCTTTGBCCK |
Best Matches for Motif ID 1 (Highest to Lowest)
Motif ID: | UP00058 |
Motif name: | Tcf3_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 2 |
Number of overlap: | 13 |
Similarity score: | 0.0357776 |
Original motif | Reverse complement motif |
Consensus sequence: HHHASATCAAAGVRHHH | Consensus sequence: HHHKVCTTTGATSTHHH |
Motif ID: | UP00054 |
Motif name: | Tcf7_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 2 |
Number of overlap: | 13 |
Similarity score: | 0.0357792 |
Original motif | Reverse complement motif |
Consensus sequence: BHHASATCAAAGGAHHH | Consensus sequence: HHHTCCTTTGATSTHHV |
Motif ID: | UP00067 |
Motif name: | Lef1_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 4 |
Number of overlap: | 13 |
Similarity score: | 0.0359011 |
Original motif | Reverse complement motif |
Consensus sequence: DDDYCCTTTGATCTDDV | Consensus sequence: VDDAGATCAAAGGKDDD |
Motif ID: | UP00083 |
Motif name: | Tcf7l2_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 4 |
Number of overlap: | 13 |
Similarity score: | 0.0360786 |
Original motif | Reverse complement motif |
Consensus sequence: DDDYCCTTTGATSTDDV | Consensus sequence: BDDASATCAAAGGMDDD |
Motif ID: | UP00046 |
Motif name: | Tcfe2a_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 4 |
Number of overlap: | 13 |
Similarity score: | 0.0405764 |
Original motif | Reverse complement motif |
Consensus sequence: HVDDVCAGATGKYHBBV | Consensus sequence: VBBDMYCATCTGVHHBH |
Motif ID: | UP00062 |
Motif name: | Sox4_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 2 |
Number of overlap: | 13 |
Similarity score: | 0.0409915 |
Original motif | Reverse complement motif |
Consensus sequence: HBDDDAACAAAGRVBHH | Consensus sequence: HHBBMCTTTGTTHDDBH |
Motif ID: | UP00101 |
Motif name: | Sox12_secondary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 1 |
Number of overlap: | 13 |
Similarity score: | 0.0413218 |
Original motif | Reverse complement motif |
Consensus sequence: VVDBASACAAAGRADH | Consensus sequence: HDTMCTTTGTSTVDBB |
Motif ID: | UP00030 |
Motif name: | Sox11_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 4 |
Number of overlap: | 13 |
Similarity score: | 0.0421105 |
Original motif | Reverse complement motif |
Consensus sequence: HBDDRAACAAAGRABHH | Consensus sequence: HHBTMCTTTGTTMDDVH |
Motif ID: | UP00086 |
Motif name: | Irf3_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 1 |
Number of overlap: | 13 |
Similarity score: | 0.0442004 |
Original motif | Reverse complement motif |
Consensus sequence: DDAGAADGGDSCDV | Consensus sequence: BHGSDCCDTTCTHH |
Motif ID: | UP00082 |
Motif name: | Zfp187_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 4 |
Number of overlap: | 13 |
Similarity score: | 0.0446884 |
Original motif | Reverse complement motif |
Consensus sequence: DDGMCCTBGTCCHYHV | Consensus sequence: VHMDGGACVAGGRCDH |
Dataset #: 1 | Motif ID: 2 | Motif name: NR2F1 |
Original motif | Reverse complement motif |
Consensus sequence: TGAMCTTTGMMCYT | Consensus sequence: AKGYYCAAAGRTCA |
Best Matches for Motif ID 2 (Highest to Lowest)
Motif ID: | UP00083 |
Motif name: | Tcf7l2_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 3 |
Number of overlap: | 14 |
Similarity score: | 0.0452364 |
Original motif | Reverse complement motif |
Consensus sequence: DDDYCCTTTGATSTDDV | Consensus sequence: BDDASATCAAAGGMDDD |
Motif ID: | UP00067 |
Motif name: | Lef1_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 2 |
Number of overlap: | 14 |
Similarity score: | 0.0453449 |
Original motif | Reverse complement motif |
Consensus sequence: DDDYCCTTTGATCTDDV | Consensus sequence: VDDAGATCAAAGGKDDD |
Motif ID: | UP00539 |
Motif name: | Gli2_v015681_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 8 |
Number of overlap: | 14 |
Similarity score: | 0.0461358 |
Original motif | Reverse complement motif |
Consensus sequence: HVGVSAGGAGGGTCYHHHHYVH | Consensus sequence: DVMHHDHKGACCCTCCTSVCBH |
Motif ID: | UP00054 |
Motif name: | Tcf7_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 2 |
Number of overlap: | 14 |
Similarity score: | 0.0461768 |
Original motif | Reverse complement motif |
Consensus sequence: BHHASATCAAAGGAHHH | Consensus sequence: HHHTCCTTTGATSTHHV |
Motif ID: | UP00058 |
Motif name: | Tcf3_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 2 |
Number of overlap: | 14 |
Similarity score: | 0.0473628 |
Original motif | Reverse complement motif |
Consensus sequence: HHHASATCAAAGVRHHH | Consensus sequence: HHHKVCTTTGATSTHHH |
Motif ID: | UP00082 |
Motif name: | Zfp187_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 1 |
Number of overlap: | 14 |
Similarity score: | 0.0480188 |
Original motif | Reverse complement motif |
Consensus sequence: DDGMCCTBGTCCHYHV | Consensus sequence: VHMDGGACVAGGRCDH |
Motif ID: | UP00062 |
Motif name: | Sox4_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 2 |
Number of overlap: | 14 |
Similarity score: | 0.0495447 |
Original motif | Reverse complement motif |
Consensus sequence: HBDDDAACAAAGRVBHH | Consensus sequence: HHBBMCTTTGTTHDDBH |
Motif ID: | UP00030 |
Motif name: | Sox11_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 3 |
Number of overlap: | 14 |
Similarity score: | 0.0499033 |
Original motif | Reverse complement motif |
Consensus sequence: HBDDRAACAAAGRABHH | Consensus sequence: HHBTMCTTTGTTMDDVH |
Motif ID: | UP00023 |
Motif name: | Sox30_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 1 |
Number of overlap: | 14 |
Similarity score: | 0.0511534 |
Original motif | Reverse complement motif |
Consensus sequence: DHDBAACAATDRHHHH | Consensus sequence: HHHHMHATTGTTBDHD |
Motif ID: | UP00005 |
Motif name: | Tcfap2a_secondary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 1 |
Number of overlap: | 14 |
Similarity score: | 0.0516973 |
Original motif | Reverse complement motif |
Consensus sequence: HHRCCBBWGGDCDB | Consensus sequence: BDGHCCWBVGGKDH |
Dataset #: 1 | Motif ID: 3 | Motif name: ESR1 |
Original motif | Reverse complement motif |
Consensus sequence: VDBHMAGGTCACCCTGACCY | Consensus sequence: MGGTCAGGGTGACCTRDBHV |
Best Matches for Motif ID 3 (Highest to Lowest)
Motif ID: | UP00538 |
Motif name: | Gli1_v016060_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 4 |
Number of overlap: | 20 |
Similarity score: | 0.0658405 |
Original motif | Reverse complement motif |
Consensus sequence: HVBDAGCGBGGGTGGCRDBDDDB | Consensus sequence: BDDHVDKGCCACCCVCGCTDBVH |
Motif ID: | UP00098 |
Motif name: | Rfx3_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 4 |
Number of overlap: | 20 |
Similarity score: | 0.0689748 |
Original motif | Reverse complement motif |
Consensus sequence: VCTBHBVCTTGGWTACVVVVVDB | Consensus sequence: BDBBVBVGTAWCCAAGVBHBAGB |
Motif ID: | UP00539 |
Motif name: | Gli2_v015681_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 3 |
Number of overlap: | 20 |
Similarity score: | 0.0701247 |
Original motif | Reverse complement motif |
Consensus sequence: HTBVVVDGGACCACCCRGRDBG | Consensus sequence: CBDMCMGGGTGGTCCHVBVBAH |
Motif ID: | UP00539 |
Motif name: | Gli2_v015681_secondary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 3 |
Number of overlap: | 20 |
Similarity score: | 0.0711267 |
Original motif | Reverse complement motif |
Consensus sequence: HVGVSAGGAGGGTCYHHHHYVH | Consensus sequence: DVMHHDHKGACCCTCCTSVCBH |
Motif ID: | UP00540 |
Motif name: | Gli3_v016060_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 2 |
Number of overlap: | 20 |
Similarity score: | 0.0742427 |
Original motif | Reverse complement motif |
Consensus sequence: HDGHHBHRGACCACCCGSVDVG | Consensus sequence: CVHBSCGGGTGGTCMHVHHCDH |
Motif ID: | UP00540 |
Motif name: | Gli3_v015681_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 3 |
Number of overlap: | 20 |
Similarity score: | 0.0747053 |
Original motif | Reverse complement motif |
Consensus sequence: ABBBBVVRGACCACCCACRDBBM | Consensus sequence: YBVDMGTGGGTGGTCKVVBVBBT |
Motif ID: | UP00538 |
Motif name: | Gli1_v016060_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 4 |
Number of overlap: | 20 |
Similarity score: | 0.0749165 |
Original motif | Reverse complement motif |
Consensus sequence: BHCBCBCCGGGTGGTCYHVHDCH | Consensus sequence: HGDHVHKGACCACCCGGBGBGDB |
Motif ID: | UP00538 |
Motif name: | Gli1_v015681_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 2 |
Number of overlap: | 20 |
Similarity score: | 0.0759307 |
Original motif | Reverse complement motif |
Consensus sequence: BBBDVVRGACCACCCAVGABBAB | Consensus sequence: BTBVTCVTGGGTGGTCMVVDVBB |
Motif ID: | UP00400 |
Motif name: | Zif268 |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 3 |
Number of overlap: | 20 |
Similarity score: | 0.0762689 |
Original motif | Reverse complement motif |
Consensus sequence: BADHBDHCGCCCMCGCAHHDBBV | Consensus sequence: VVVDHHTGCGYGGGCGDHVHHTB |
Motif ID: | UP00034 |
Motif name: | Sox7_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 1 |
Number of overlap: | 20 |
Similarity score: | 0.0780113 |
Original motif | Reverse complement motif |
Consensus sequence: GTVBDAATTGTVTGHGDDHKVB | Consensus sequence: VVYDDDCHCAVACAATTDBVAC |
Dataset #: 1 | Motif ID: 4 | Motif name: Esrrb |
Original motif | Reverse complement motif |
Consensus sequence: VBBYCAAGGTCA | Consensus sequence: TGACCTTGMBBB |
Best Matches for Motif ID 4 (Highest to Lowest)
Motif ID: | UP00079 |
Motif name: | Esrra_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 6 |
Number of overlap: | 12 |
Similarity score: | 0 |
Original motif | Reverse complement motif |
Consensus sequence: DHDBCAAGGTCAHVBDH | Consensus sequence: HHBVHTGACCTTGVDHD |
Motif ID: | UP00009 |
Motif name: | Nr2f2_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 1 |
Number of overlap: | 12 |
Similarity score: | 0.0205471 |
Original motif | Reverse complement motif |
Consensus sequence: DHBHAAAGGTCAHVHB | Consensus sequence: BHVDTGACCTTTDVDD |
Motif ID: | UP00048 |
Motif name: | Rara |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 1 |
Number of overlap: | 12 |
Similarity score: | 0.0214372 |
Original motif | Reverse complement motif |
Consensus sequence: DHBHAAAGGTCACVHD | Consensus sequence: HHVGTGACCTTTDVDD |
Motif ID: | UP00009 |
Motif name: | Nr2f2_secondary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 5 |
Number of overlap: | 12 |
Similarity score: | 0.0430759 |
Original motif | Reverse complement motif |
Consensus sequence: VBVBCSGGGTCAVBBH | Consensus sequence: HVBVTGACCCSGBVBV |
Motif ID: | UP00066 |
Motif name: | Hnf4a_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 1 |
Number of overlap: | 12 |
Similarity score: | 0.0451776 |
Original motif | Reverse complement motif |
Consensus sequence: BDBVMGGGGTCAABHDV | Consensus sequence: BHHVTTGACCCCYVVDB |
Motif ID: | UP00079 |
Motif name: | Esrra_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 6 |
Number of overlap: | 12 |
Similarity score: | 0.0482496 |
Original motif | Reverse complement motif |
Consensus sequence: VKBBAGGGGTCAHDBBH | Consensus sequence: DBBHHTGACCCCTBBYV |
Motif ID: | UP00053 |
Motif name: | Rxra_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 1 |
Number of overlap: | 12 |
Similarity score: | 0.0499025 |
Original motif | Reverse complement motif |
Consensus sequence: DBHBDTGACCCCDHVHB | Consensus sequence: VHBHDGGGGTCAHBHBD |
Motif ID: | UP00539 |
Motif name: | Gli2_v015681_secondary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 8 |
Number of overlap: | 12 |
Similarity score: | 0.0525354 |
Original motif | Reverse complement motif |
Consensus sequence: HVGVSAGGAGGGTCYHHHHYVH | Consensus sequence: DVMHHDHKGACCCTCCTSVCBH |
Motif ID: | UP00066 |
Motif name: | Hnf4a_secondary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 1 |
Number of overlap: | 12 |
Similarity score: | 0.0580553 |
Original motif | Reverse complement motif |
Consensus sequence: BBHHAAAGTCCAMTHH | Consensus sequence: HHAYTGGACTTTHDBV |
Motif ID: | UP00098 |
Motif name: | Rfx3_secondary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 4 |
Number of overlap: | 12 |
Similarity score: | 0.0609738 |
Original motif | Reverse complement motif |
Consensus sequence: VCTBHBVCTTGGWTACVVVVVDB | Consensus sequence: BDBBVBVGTAWCCAAGVBHBAGB |
Dataset #: 1 | Motif ID: 5 | Motif name: ZEB1 |
Original motif | Reverse complement motif |
Consensus sequence: CACCTD | Consensus sequence: HAGGTG |
Best Matches for Motif ID 5 (Highest to Lowest)
Motif ID: | UP00068 |
Motif name: | Eomes_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 4 |
Number of overlap: | 6 |
Similarity score: | 0 |
Original motif | Reverse complement motif |
Consensus sequence: VBVDAGGTGTYGVBBV | Consensus sequence: VVBVCKACACCTHVBV |
Motif ID: | UP00199 |
Motif name: | Six4 |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 4 |
Number of overlap: | 6 |
Similarity score: | 0.00433068 |
Original motif | Reverse complement motif |
Consensus sequence: ADDHATGACACCBHBBV | Consensus sequence: BBVHVGGTGTCATHDDT |
Motif ID: | UP00068 |
Motif name: | Eomes_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 9 |
Number of overlap: | 6 |
Similarity score: | 0.00524081 |
Original motif | Reverse complement motif |
Consensus sequence: BVHDAGGTGTGAAAHHH | Consensus sequence: HHHTTTCACACCTDHBV |
Motif ID: | UP00046 |
Motif name: | Tcfe2a_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 7 |
Number of overlap: | 6 |
Similarity score: | 0.00911301 |
Original motif | Reverse complement motif |
Consensus sequence: VBHHVCAGGTGCDVDHD | Consensus sequence: DHDBHGCACCTGBDDVB |
Motif ID: | UP00047 |
Motif name: | Zbtb7b_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 9 |
Number of overlap: | 6 |
Similarity score: | 0.0233556 |
Original motif | Reverse complement motif |
Consensus sequence: BDDRVGACCACCHBDVB | Consensus sequence: BBDVHGGTGGTCBKDDB |
Motif ID: | UP00538 |
Motif name: | Gli1_v016060_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 11 |
Number of overlap: | 6 |
Similarity score: | 0.0233928 |
Original motif | Reverse complement motif |
Consensus sequence: BHCBCBCCGGGTGGTCYHVHDCH | Consensus sequence: HGDHVHKGACCACCCGGBGBGDB |
Motif ID: | UP00539 |
Motif name: | Gli2_v015681_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 12 |
Number of overlap: | 6 |
Similarity score: | 0.0254338 |
Original motif | Reverse complement motif |
Consensus sequence: HTBVVVDGGACCACCCRGRDBG | Consensus sequence: CBDMCMGGGTGGTCCHVBVBAH |
Motif ID: | UP00540 |
Motif name: | Gli3_v016060_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 12 |
Number of overlap: | 6 |
Similarity score: | 0.0290143 |
Original motif | Reverse complement motif |
Consensus sequence: HDGHHBHRGACCACCCGSVDVG | Consensus sequence: CVHBSCGGGTGGTCMHVHHCDH |
Motif ID: | UP00036 |
Motif name: | Myf6_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 7 |
Number of overlap: | 6 |
Similarity score: | 0.0309673 |
Original motif | Reverse complement motif |
Consensus sequence: VVDBAACAGBTGBYHB | Consensus sequence: BDKVCABCTGTTBDBV |
Motif ID: | UP00249 |
Motif name: | Nkx2-5 |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 6 |
Number of overlap: | 6 |
Similarity score: | 0.031502 |
Original motif | Reverse complement motif |
Consensus sequence: HDADCCACTTRAAWTT | Consensus sequence: AAWTTMAAGTGGHTDH |
Dataset #: 1 | Motif ID: 6 | Motif name: Mycn |
Original motif | Reverse complement motif |
Consensus sequence: HSCACGTGGC | Consensus sequence: GCCACGTGSD |
Best Matches for Motif ID 6 (Highest to Lowest)
Motif ID: | UP00060 |
Motif name: | Max_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 3 |
Number of overlap: | 10 |
Similarity score: | 0 |
Original motif | Reverse complement motif |
Consensus sequence: DDASCACGTGBTBVDD | Consensus sequence: HHVBABCACGTGSTHD |
Motif ID: | UP00050 |
Motif name: | Bhlhb2_secondary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 7 |
Number of overlap: | 10 |
Similarity score: | 0.00783793 |
Original motif | Reverse complement motif |
Consensus sequence: YDYBDHTMCACGTGGADDBMDGT | Consensus sequence: ACHRBHDTCCACGTGYAHHBMHM |
Motif ID: | UP00050 |
Motif name: | Bhlhb2_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 7 |
Number of overlap: | 10 |
Similarity score: | 0.0132858 |
Original motif | Reverse complement motif |
Consensus sequence: RDHDBVDTCACGTGASBHVHDH | Consensus sequence: DDHBHBSTCACGTGAHBBDHHM |
Motif ID: | UP00046 |
Motif name: | Tcfe2a_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 5 |
Number of overlap: | 10 |
Similarity score: | 0.0227933 |
Original motif | Reverse complement motif |
Consensus sequence: VBHHVCAGGTGCDVDHD | Consensus sequence: DHDBHGCACCTGBDDVB |
Motif ID: | UP00060 |
Motif name: | Max_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 3 |
Number of overlap: | 10 |
Similarity score: | 0.0257011 |
Original motif | Reverse complement motif |
Consensus sequence: BBGHCACGCGACDD | Consensus sequence: HDGTCGCGTGDCVB |
Motif ID: | UP00165 |
Motif name: | Titf1 |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 4 |
Number of overlap: | 10 |
Similarity score: | 0.0344833 |
Original motif | Reverse complement motif |
Consensus sequence: BVABCCACTTGAMHTT | Consensus sequence: AAHYTCAAGTGGBTBV |
Motif ID: | UP00231 |
Motif name: | Nkx2-2 |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 5 |
Number of overlap: | 10 |
Similarity score: | 0.035228 |
Original motif | Reverse complement motif |
Consensus sequence: HDVRCCACTTGARADBD | Consensus sequence: DVDTKTCAAGTGGKBDH |
Motif ID: | UP00084 |
Motif name: | Gmeb1_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 4 |
Number of overlap: | 10 |
Similarity score: | 0.0358581 |
Original motif | Reverse complement motif |
Consensus sequence: BHBBKKACGTMMVDBVB | Consensus sequence: BVVDVRYACGTRYVBHB |
Motif ID: | UP00084 |
Motif name: | Gmeb1_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 4 |
Number of overlap: | 10 |
Similarity score: | 0.03725 |
Original motif | Reverse complement motif |
Consensus sequence: DGVBCRACGTYGTYHH | Consensus sequence: HHMACKACGTMGBVCD |
Motif ID: | UP00526 |
Motif name: | Foxn1_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 7 |
Number of overlap: | 10 |
Similarity score: | 0.0383187 |
Original motif | Reverse complement motif |
Consensus sequence: WHVBVVMACGCGCGTCDYHWDH | Consensus sequence: HDWHMHGACGCGCGTRBVVBHW |
Dataset #: 1 | Motif ID: 7 | Motif name: REST |
Original motif | Reverse complement motif |
Consensus sequence: TTCAGCACCATGGACAGCKCC | Consensus sequence: GGYGCTGTCCATGGTGCTGAA |
Best Matches for Motif ID 7 (Highest to Lowest)
Motif ID: | UP00538 |
Motif name: | Gli1_v015681_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 3 |
Number of overlap: | 21 |
Similarity score: | 0.0699178 |
Original motif | Reverse complement motif |
Consensus sequence: BBBDVVRGACCACCCAVGABBAB | Consensus sequence: BTBVTCVTGGGTGGTCMVVDVBB |
Motif ID: | UP00540 |
Motif name: | Gli3_v015681_secondary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 1 |
Number of overlap: | 21 |
Similarity score: | 0.0734685 |
Original motif | Reverse complement motif |
Consensus sequence: DVTTVVCVYGGHGGYCHHDMYB | Consensus sequence: VMYDHDGMCCHCCKBGVVAAVH |
Motif ID: | UP00540 |
Motif name: | Gli3_v016060_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 2 |
Number of overlap: | 21 |
Similarity score: | 0.0740652 |
Original motif | Reverse complement motif |
Consensus sequence: VYWVVHCRCCACMCACGAHSBHH | Consensus sequence: HHBSHTCGTGRGTGGKGDBVWMV |
Motif ID: | UP00538 |
Motif name: | Gli1_v015681_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 3 |
Number of overlap: | 21 |
Similarity score: | 0.0750152 |
Original motif | Reverse complement motif |
Consensus sequence: MHHHWHYTMCCHCCCACVAABVH | Consensus sequence: DVVTTVGTGGGHGGYAMHWHHHY |
Motif ID: | UP00538 |
Motif name: | Gli1_v016060_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 3 |
Number of overlap: | 21 |
Similarity score: | 0.0751449 |
Original motif | Reverse complement motif |
Consensus sequence: BHCBCBCCGGGTGGTCYHVHDCH | Consensus sequence: HGDHVHKGACCACCCGGBGBGDB |
Motif ID: | UP00538 |
Motif name: | Gli1_v016060_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 2 |
Number of overlap: | 21 |
Similarity score: | 0.075832 |
Original motif | Reverse complement motif |
Consensus sequence: HVBDAGCGBGGGTGGCRDBDDDB | Consensus sequence: BDDHVDKGCCACCCVCGCTDBVH |
Motif ID: | UP00539 |
Motif name: | Gli2_v016060_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 1 |
Number of overlap: | 21 |
Similarity score: | 0.0773446 |
Original motif | Reverse complement motif |
Consensus sequence: DTVBDDRGACCACCCAGDWDGBH | Consensus sequence: DBCDWHCTGGGTGGTCMDHBBAH |
Motif ID: | UP00050 |
Motif name: | Bhlhb2_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 3 |
Number of overlap: | 21 |
Similarity score: | 0.0775367 |
Original motif | Reverse complement motif |
Consensus sequence: YDYBDHTMCACGTGGADDBMDGT | Consensus sequence: ACHRBHDTCCACGTGYAHHBMHM |
Motif ID: | UP00528 |
Motif name: | Foxm1_secondary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 1 |
Number of overlap: | 21 |
Similarity score: | 0.077977 |
Original motif | Reverse complement motif |
Consensus sequence: MWSMBAARRATGCDCABHATGD | Consensus sequence: DCATDBTGHGCATKMTTBRSWR |
Motif ID: | UP00400 |
Motif name: | Zif268 |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 1 |
Number of overlap: | 21 |
Similarity score: | 0.0785969 |
Original motif | Reverse complement motif |
Consensus sequence: BADHBDHCGCCCMCGCAHHDBBV | Consensus sequence: VVVDHHTGCGYGGGCGDHVHHTB |
Dataset #: 1 | Motif ID: 8 | Motif name: Myc |
Original motif | Reverse complement motif |
Consensus sequence: VGCACGTGGH | Consensus sequence: DCCACGTGCV |
Best Matches for Motif ID 8 (Highest to Lowest)
Motif ID: | UP00060 |
Motif name: | Max_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 5 |
Number of overlap: | 10 |
Similarity score: | 0 |
Original motif | Reverse complement motif |
Consensus sequence: DDASCACGTGBTBVDD | Consensus sequence: HHVBABCACGTGSTHD |
Motif ID: | UP00050 |
Motif name: | Bhlhb2_secondary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 7 |
Number of overlap: | 10 |
Similarity score: | 0.00631885 |
Original motif | Reverse complement motif |
Consensus sequence: YDYBDHTMCACGTGGADDBMDGT | Consensus sequence: ACHRBHDTCCACGTGYAHHBMHM |
Motif ID: | UP00050 |
Motif name: | Bhlhb2_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 7 |
Number of overlap: | 10 |
Similarity score: | 0.00821668 |
Original motif | Reverse complement motif |
Consensus sequence: RDHDBVDTCACGTGASBHVHDH | Consensus sequence: DDHBHBSTCACGTGAHBBDHHM |
Motif ID: | UP00046 |
Motif name: | Tcfe2a_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 4 |
Number of overlap: | 10 |
Similarity score: | 0.0140005 |
Original motif | Reverse complement motif |
Consensus sequence: VBHHVCAGGTGCDVDHD | Consensus sequence: DHDBHGCACCTGBDDVB |
Motif ID: | UP00060 |
Motif name: | Max_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 3 |
Number of overlap: | 10 |
Similarity score: | 0.0308912 |
Original motif | Reverse complement motif |
Consensus sequence: BBGHCACGCGACDD | Consensus sequence: HDGTCGCGTGDCVB |
Motif ID: | UP00165 |
Motif name: | Titf1 |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 4 |
Number of overlap: | 10 |
Similarity score: | 0.0311723 |
Original motif | Reverse complement motif |
Consensus sequence: BVABCCACTTGAMHTT | Consensus sequence: AAHYTCAAGTGGBTBV |
Motif ID: | UP00249 |
Motif name: | Nkx2-5 |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 4 |
Number of overlap: | 10 |
Similarity score: | 0.031308 |
Original motif | Reverse complement motif |
Consensus sequence: HDADCCACTTRAAWTT | Consensus sequence: AAWTTMAAGTGGHTDH |
Motif ID: | UP00231 |
Motif name: | Nkx2-2 |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 4 |
Number of overlap: | 10 |
Similarity score: | 0.0334845 |
Original motif | Reverse complement motif |
Consensus sequence: HDVRCCACTTGARADBD | Consensus sequence: DVDTKTCAAGTGGKBDH |
Motif ID: | UP00147 |
Motif name: | Nkx2-6 |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 4 |
Number of overlap: | 10 |
Similarity score: | 0.0345548 |
Original motif | Reverse complement motif |
Consensus sequence: DDADCCACTTAAVHTT | Consensus sequence: AAHVTTAAGTGGHTDD |
Motif ID: | UP00527 |
Motif name: | Foxn4_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 6 |
Number of overlap: | 10 |
Similarity score: | 0.0363818 |
Original motif | Reverse complement motif |
Consensus sequence: VDWDARRGACGCGGWHGGAKHV | Consensus sequence: VHYTCCDWCCGCGTCMMTHWHV |
Dataset #: 1 | Motif ID: 9 | Motif name: ESR2 |
Original motif | Reverse complement motif |
Consensus sequence: VHRGGTCABDBTGMCCTB | Consensus sequence: BAGGYCABHBTGACCKHV |
Best Matches for Motif ID 9 (Highest to Lowest)
Motif ID: | UP00034 |
Motif name: | Sox7_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 4 |
Number of overlap: | 18 |
Similarity score: | 0.0443894 |
Original motif | Reverse complement motif |
Consensus sequence: GTVBDAATTGTVTGHGDDHKVB | Consensus sequence: VVYDDDCHCAVACAATTDBVAC |
Motif ID: | UP00538 |
Motif name: | Gli1_v016060_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 4 |
Number of overlap: | 18 |
Similarity score: | 0.049219 |
Original motif | Reverse complement motif |
Consensus sequence: HVBDAGCGBGGGTGGCRDBDDDB | Consensus sequence: BDDHVDKGCCACCCVCGCTDBVH |
Motif ID: | UP00050 |
Motif name: | Bhlhb2_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 3 |
Number of overlap: | 18 |
Similarity score: | 0.0509182 |
Original motif | Reverse complement motif |
Consensus sequence: RDHDBVDTCACGTGASBHVHDH | Consensus sequence: DDHBHBSTCACGTGAHBBDHHM |
Motif ID: | UP00540 |
Motif name: | Gli3_v015681_secondary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 2 |
Number of overlap: | 18 |
Similarity score: | 0.0527075 |
Original motif | Reverse complement motif |
Consensus sequence: DVTTVVCVYGGHGGYCHHDMYB | Consensus sequence: VMYDHDGMCCHCCKBGVVAAVH |
Motif ID: | UP00034 |
Motif name: | Sox7_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 2 |
Number of overlap: | 18 |
Similarity score: | 0.0541044 |
Original motif | Reverse complement motif |
Consensus sequence: HHBDHDDAACAATDRHHHHHBW | Consensus sequence: WBHHHHHMDATTGTTHDHDVHH |
Motif ID: | UP00098 |
Motif name: | Rfx3_secondary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 3 |
Number of overlap: | 18 |
Similarity score: | 0.0541108 |
Original motif | Reverse complement motif |
Consensus sequence: VCTBHBVCTTGGWTACVVVVVDB | Consensus sequence: BDBBVBVGTAWCCAAGVBHBAGB |
Motif ID: | UP00527 |
Motif name: | Foxn4_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 2 |
Number of overlap: | 18 |
Similarity score: | 0.0543733 |
Original motif | Reverse complement motif |
Consensus sequence: VDWDARRGACGCGGWHGGAKHV | Consensus sequence: VHYTCCDWCCGCGTCMMTHWHV |
Motif ID: | UP00538 |
Motif name: | Gli1_v016060_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 5 |
Number of overlap: | 18 |
Similarity score: | 0.0548087 |
Original motif | Reverse complement motif |
Consensus sequence: BHCBCBCCGGGTGGTCYHVHDCH | Consensus sequence: HGDHVHKGACCACCCGGBGBGDB |
Motif ID: | UP00528 |
Motif name: | Foxm1_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 5 |
Number of overlap: | 18 |
Similarity score: | 0.055453 |
Original motif | Reverse complement motif |
Consensus sequence: MWSMBAARRATGCDCABHATGD | Consensus sequence: DCATDBTGHGCATKMTTBRSWR |
Motif ID: | UP00032 |
Motif name: | Gata3_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 4 |
Number of overlap: | 18 |
Similarity score: | 0.0566426 |
Original motif | Reverse complement motif |
Consensus sequence: HBHDVBWGATHBTATCRVBHHH | Consensus sequence: HHHBBMGATAVHATCWVVDHVH |
Dataset #: 1 | Motif ID: 10 | Motif name: NR1H2RXRA |
Original motif | Reverse complement motif |
Consensus sequence: AAAGGTCAAAGGTCAAC | Consensus sequence: GTTGACCTTTGACCTTT |
Best Matches for Motif ID 10 (Highest to Lowest)
Motif ID: | UP00539 |
Motif name: | Gli2_v015681_secondary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 1 |
Number of overlap: | 17 |
Similarity score: | 0.0538452 |
Original motif | Reverse complement motif |
Consensus sequence: HVGVSAGGAGGGTCYHHHHYVH | Consensus sequence: DVMHHDHKGACCCTCCTSVCBH |
Motif ID: | UP00032 |
Motif name: | Gata3_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 1 |
Number of overlap: | 17 |
Similarity score: | 0.0545098 |
Original motif | Reverse complement motif |
Consensus sequence: BDHDDADAGATAAGADHBDHVD | Consensus sequence: HBHDVHDTCTTATCTHTDDHDV |
Motif ID: | UP00067 |
Motif name: | Lef1_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 2 |
Number of overlap: | 16 |
Similarity score: | 0.521114 |
Original motif | Reverse complement motif |
Consensus sequence: DDDYCCTTTGATCTDDV | Consensus sequence: VDDAGATCAAAGGKDDD |
Motif ID: | UP00083 |
Motif name: | Tcf7l2_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 2 |
Number of overlap: | 16 |
Similarity score: | 0.527825 |
Original motif | Reverse complement motif |
Consensus sequence: DDDYCCTTTGATSTDDV | Consensus sequence: BDDASATCAAAGGMDDD |
Motif ID: | UP00054 |
Motif name: | Tcf7_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 2 |
Number of overlap: | 16 |
Similarity score: | 0.531154 |
Original motif | Reverse complement motif |
Consensus sequence: BHHASATCAAAGGAHHH | Consensus sequence: HHHTCCTTTGATSTHHV |
Motif ID: | UP00058 |
Motif name: | Tcf3_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 2 |
Number of overlap: | 16 |
Similarity score: | 0.531876 |
Original motif | Reverse complement motif |
Consensus sequence: HHHASATCAAAGVRHHH | Consensus sequence: HHHKVCTTTGATSTHHH |
Motif ID: | UP00030 |
Motif name: | Sox11_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 2 |
Number of overlap: | 16 |
Similarity score: | 0.544403 |
Original motif | Reverse complement motif |
Consensus sequence: HBDDRAACAAAGRABHH | Consensus sequence: HHBTMCTTTGTTMDDVH |
Motif ID: | UP00062 |
Motif name: | Sox4_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 2 |
Number of overlap: | 16 |
Similarity score: | 0.544565 |
Original motif | Reverse complement motif |
Consensus sequence: HBDDDAACAAAGRVBHH | Consensus sequence: HHBBMCTTTGTTHDDBH |
Motif ID: | UP00019 |
Motif name: | Zbtb12_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 2 |
Number of overlap: | 16 |
Similarity score: | 0.550511 |
Original motif | Reverse complement motif |
Consensus sequence: BDHRBGTTCTAGATCVB | Consensus sequence: BBGATCTAGAACBKHDB |
Motif ID: | UP00046 |
Motif name: | Tcfe2a_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 2 |
Number of overlap: | 16 |
Similarity score: | 0.552064 |
Original motif | Reverse complement motif |
Consensus sequence: HVDDVCAGATGKYHBBV | Consensus sequence: VBBDMYCATCTGVHHBH |
Dataset #: 1 | Motif ID: 11 | Motif name: NR4A2 |
Original motif | Reverse complement motif |
Consensus sequence: AAGGTCAC | Consensus sequence: GTGACCTT |
Best Matches for Motif ID 11 (Highest to Lowest)
Motif ID: | UP00048 |
Motif name: | Rara |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 4 |
Number of overlap: | 8 |
Similarity score: | 0 |
Original motif | Reverse complement motif |
Consensus sequence: DHBHAAAGGTCACVHD | Consensus sequence: HHVGTGACCTTTDVDD |
Motif ID: | UP00009 |
Motif name: | Nr2f2_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 4 |
Number of overlap: | 8 |
Similarity score: | 0.0074527 |
Original motif | Reverse complement motif |
Consensus sequence: DHBHAAAGGTCAHVHB | Consensus sequence: BHVDTGACCTTTDVDD |
Motif ID: | UP00079 |
Motif name: | Esrra_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 5 |
Number of overlap: | 8 |
Similarity score: | 0.01542 |
Original motif | Reverse complement motif |
Consensus sequence: DHDBCAAGGTCAHVBDH | Consensus sequence: HHBVHTGACCTTGVDHD |
Motif ID: | UP00009 |
Motif name: | Nr2f2_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 4 |
Number of overlap: | 8 |
Similarity score: | 0.0395644 |
Original motif | Reverse complement motif |
Consensus sequence: VBVBCSGGGTCAVBBH | Consensus sequence: HVBVTGACCCSGBVBV |
Motif ID: | UP00082 |
Motif name: | Zfp187_secondary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 9 |
Number of overlap: | 8 |
Similarity score: | 0.0407874 |
Original motif | Reverse complement motif |
Consensus sequence: DDGMCCTBGTCCHYHV | Consensus sequence: VHMDGGACVAGGRCDH |
Motif ID: | UP00053 |
Motif name: | Rxra_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 6 |
Number of overlap: | 8 |
Similarity score: | 0.0422933 |
Original motif | Reverse complement motif |
Consensus sequence: DBHBDTGACCCCDHVHB | Consensus sequence: VHBHDGGGGTCAHBHBD |
Motif ID: | UP00079 |
Motif name: | Esrra_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 5 |
Number of overlap: | 8 |
Similarity score: | 0.0447444 |
Original motif | Reverse complement motif |
Consensus sequence: VKBBAGGGGTCAHDBBH | Consensus sequence: DBBHHTGACCCCTBBYV |
Motif ID: | UP00066 |
Motif name: | Hnf4a_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 6 |
Number of overlap: | 8 |
Similarity score: | 0.0481418 |
Original motif | Reverse complement motif |
Consensus sequence: BBHHAAAGTCCAMTHH | Consensus sequence: HHAYTGGACTTTHDBV |
Motif ID: | UP00197 |
Motif name: | Hoxc9 |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 8 |
Number of overlap: | 8 |
Similarity score: | 0.0497679 |
Original motif | Reverse complement motif |
Consensus sequence: VDVGGTCATTAAHHDB | Consensus sequence: VDHHTTAATGACCBHV |
Motif ID: | UP00035 |
Motif name: | Hic1_secondary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 5 |
Number of overlap: | 8 |
Similarity score: | 0.0500062 |
Original motif | Reverse complement motif |
Consensus sequence: DBDDRTGCCCAWDHDV | Consensus sequence: VHHDWTGGGCAMDHBH |
Dataset #: 1 | Motif ID: 12 | Motif name: RORA_1 |
Original motif | Reverse complement motif |
Consensus sequence: AWVDAGGTCA | Consensus sequence: TGACCTDVWT |
Best Matches for Motif ID 12 (Highest to Lowest)
Motif ID: | UP00009 |
Motif name: | Nr2f2_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 5 |
Number of overlap: | 10 |
Similarity score: | 0.0154749 |
Original motif | Reverse complement motif |
Consensus sequence: DHBHAAAGGTCAHVHB | Consensus sequence: BHVDTGACCTTTDVDD |
Motif ID: | UP00079 |
Motif name: | Esrra_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 6 |
Number of overlap: | 10 |
Similarity score: | 0.0176661 |
Original motif | Reverse complement motif |
Consensus sequence: DHDBCAAGGTCAHVBDH | Consensus sequence: HHBVHTGACCTTGVDHD |
Motif ID: | UP00048 |
Motif name: | Rara |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 5 |
Number of overlap: | 10 |
Similarity score: | 0.0189599 |
Original motif | Reverse complement motif |
Consensus sequence: DHBHAAAGGTCACVHD | Consensus sequence: HHVGTGACCTTTDVDD |
Motif ID: | UP00009 |
Motif name: | Nr2f2_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 5 |
Number of overlap: | 10 |
Similarity score: | 0.0331999 |
Original motif | Reverse complement motif |
Consensus sequence: VBVBCSGGGTCAVBBH | Consensus sequence: HVBVTGACCCSGBVBV |
Motif ID: | UP00066 |
Motif name: | Hnf4a_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 3 |
Number of overlap: | 10 |
Similarity score: | 0.0341771 |
Original motif | Reverse complement motif |
Consensus sequence: BDBVMGGGGTCAABHDV | Consensus sequence: BHHVTTGACCCCYVVDB |
Motif ID: | UP00053 |
Motif name: | Rxra_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 6 |
Number of overlap: | 10 |
Similarity score: | 0.0363566 |
Original motif | Reverse complement motif |
Consensus sequence: DBHBDTGACCCCDHVHB | Consensus sequence: VHBHDGGGGTCAHBHBD |
Motif ID: | UP00079 |
Motif name: | Esrra_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 3 |
Number of overlap: | 10 |
Similarity score: | 0.0391284 |
Original motif | Reverse complement motif |
Consensus sequence: VKBBAGGGGTCAHDBBH | Consensus sequence: DBBHHTGACCCCTBBYV |
Motif ID: | UP00035 |
Motif name: | Hic1_secondary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 2 |
Number of overlap: | 10 |
Similarity score: | 0.0444205 |
Original motif | Reverse complement motif |
Consensus sequence: DBDDRTGCCCAWDHDV | Consensus sequence: VHHDWTGGGCAMDHBH |
Motif ID: | UP00050 |
Motif name: | Bhlhb2_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 1 |
Number of overlap: | 10 |
Similarity score: | 0.0461434 |
Original motif | Reverse complement motif |
Consensus sequence: RDHDBVDTCACGTGASBHVHDH | Consensus sequence: DDHBHBSTCACGTGAHBBDHHM |
Motif ID: | UP00538 |
Motif name: | Gli1_v016060_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 3 |
Number of overlap: | 10 |
Similarity score: | 0.0489571 |
Original motif | Reverse complement motif |
Consensus sequence: BHCBCBCCGGGTGGTCYHVHDCH | Consensus sequence: HGDHVHKGACCACCCGGBGBGDB |
Dataset #: 1 | Motif ID: 13 | Motif name: MIZF |
Original motif | Reverse complement motif |
Consensus sequence: BAACGTCCGC | Consensus sequence: GCGGACGTTV |
Best Matches for Motif ID 13 (Highest to Lowest)
Motif ID: | UP00419 |
Motif name: | Spic |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 1 |
Number of overlap: | 10 |
Similarity score: | 0 |
Original motif | Reverse complement motif |
Consensus sequence: VAAAGMGGAAGTWD | Consensus sequence: DWACTTCCRCTTTB |
Motif ID: | UP00409 |
Motif name: | Elf5 |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 1 |
Number of overlap: | 10 |
Similarity score: | 0.00379999 |
Original motif | Reverse complement motif |
Consensus sequence: BWAHSMGGAAGTWD | Consensus sequence: DWACTTCCRSDTWV |
Motif ID: | UP00413 |
Motif name: | Elf4 |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 5 |
Number of overlap: | 10 |
Similarity score: | 0.0124101 |
Original motif | Reverse complement motif |
Consensus sequence: DBBHACTTCCGGKWTH | Consensus sequence: HAWYCCGGAAGTHBBD |
Motif ID: | UP00404 |
Motif name: | Elf2 |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 3 |
Number of overlap: | 10 |
Similarity score: | 0.0128348 |
Original motif | Reverse complement motif |
Consensus sequence: DBBHACTTCCGGDWDB | Consensus sequence: BDWDCCGGAAGTHBBD |
Motif ID: | UP00085 |
Motif name: | Sfpi1_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 1 |
Number of overlap: | 10 |
Similarity score: | 0.0141516 |
Original motif | Reverse complement motif |
Consensus sequence: BDAWGVGGAAGTDH | Consensus sequence: HDACTTCCBCWTDV |
Motif ID: | UP00423 |
Motif name: | Gm5454 |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 5 |
Number of overlap: | 10 |
Similarity score: | 0.0144665 |
Original motif | Reverse complement motif |
Consensus sequence: VDHHACTTCCGGTHVH | Consensus sequence: DVHACCGGAAGTHDDV |
Motif ID: | UP00412 |
Motif name: | Etv5 |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 5 |
Number of overlap: | 10 |
Similarity score: | 0.0155825 |
Original motif | Reverse complement motif |
Consensus sequence: VDHAACWTCCGGTHHH | Consensus sequence: DHHACCGGAWGTTDDV |
Motif ID: | UP00015 |
Motif name: | Ehf_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 6 |
Number of overlap: | 10 |
Similarity score: | 0.0162018 |
Original motif | Reverse complement motif |
Consensus sequence: VBDABCCGGAAGTDD | Consensus sequence: DDACTTCCGGBTHBB |
Motif ID: | UP00418 |
Motif name: | Etv6 |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 4 |
Number of overlap: | 10 |
Similarity score: | 0.0171234 |
Original motif | Reverse complement motif |
Consensus sequence: DVHBTACTTCCGGHTHB | Consensus sequence: BHAHCCGGAAGTABDVD |
Motif ID: | UP00421 |
Motif name: | Etv1 |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 6 |
Number of overlap: | 10 |
Similarity score: | 0.0184147 |
Original motif | Reverse complement motif |
Consensus sequence: MVHBACCGGAAGTVDVH | Consensus sequence: HBDBACTTCCGGTBHVY |
Dataset #: 1 | Motif ID: 14 | Motif name: PPARGRXRA |
Original motif | Reverse complement motif |
Consensus sequence: BTRGGDCARAGGKCA | Consensus sequence: TGRCCTKTGHCCKAB |
Best Matches for Motif ID 14 (Highest to Lowest)
Motif ID: | UP00067 |
Motif name: | Lef1_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 2 |
Number of overlap: | 15 |
Similarity score: | 0.0304954 |
Original motif | Reverse complement motif |
Consensus sequence: DDDYCCTTTGATCTDDV | Consensus sequence: VDDAGATCAAAGGKDDD |
Motif ID: | UP00058 |
Motif name: | Tcf3_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 2 |
Number of overlap: | 15 |
Similarity score: | 0.0319475 |
Original motif | Reverse complement motif |
Consensus sequence: HHHASATCAAAGVRHHH | Consensus sequence: HHHKVCTTTGATSTHHH |
Motif ID: | UP00054 |
Motif name: | Tcf7_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 2 |
Number of overlap: | 15 |
Similarity score: | 0.032779 |
Original motif | Reverse complement motif |
Consensus sequence: BHHASATCAAAGGAHHH | Consensus sequence: HHHTCCTTTGATSTHHV |
Motif ID: | UP00082 |
Motif name: | Zfp187_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 2 |
Number of overlap: | 15 |
Similarity score: | 0.0334185 |
Original motif | Reverse complement motif |
Consensus sequence: DDGMCCTBGTCCHYHV | Consensus sequence: VHMDGGACVAGGRCDH |
Motif ID: | UP00062 |
Motif name: | Sox4_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 2 |
Number of overlap: | 15 |
Similarity score: | 0.0352539 |
Original motif | Reverse complement motif |
Consensus sequence: HBDDDAACAAAGRVBHH | Consensus sequence: HHBBMCTTTGTTHDDBH |
Motif ID: | UP00030 |
Motif name: | Sox11_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 2 |
Number of overlap: | 15 |
Similarity score: | 0.0358782 |
Original motif | Reverse complement motif |
Consensus sequence: HBDDRAACAAAGRABHH | Consensus sequence: HHBTMCTTTGTTMDDVH |
Motif ID: | UP00101 |
Motif name: | Sox12_secondary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 2 |
Number of overlap: | 15 |
Similarity score: | 0.0374729 |
Original motif | Reverse complement motif |
Consensus sequence: VVDBASACAAAGRADH | Consensus sequence: HDTMCTTTGTSTVDBB |
Motif ID: | UP00083 |
Motif name: | Tcf7l2_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 2 |
Number of overlap: | 15 |
Similarity score: | 0.0379757 |
Original motif | Reverse complement motif |
Consensus sequence: DDDYCCTTTGATSTDDV | Consensus sequence: BDDASATCAAAGGMDDD |
Motif ID: | UP00093 |
Motif name: | Klf7_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 2 |
Number of overlap: | 15 |
Similarity score: | 0.0382733 |
Original motif | Reverse complement motif |
Consensus sequence: HBDRCCMCGCCCHHHD | Consensus sequence: DHHDGGGCGRGGKHBH |
Motif ID: | UP00055 |
Motif name: | Hbp1_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 3 |
Number of overlap: | 15 |
Similarity score: | 0.0397168 |
Original motif | Reverse complement motif |
Consensus sequence: DDDYCCCATTGTVHABH | Consensus sequence: HBTHVACAATGGGMDHD |
Dataset #: 1 | Motif ID: 15 | Motif name: Tcfcp2l1 |
Original motif | Reverse complement motif |
Consensus sequence: CCAGYYHVADCCRG | Consensus sequence: CKGGDTBDMMCTGG |
Best Matches for Motif ID 15 (Highest to Lowest)
Motif ID: | UP00032 |
Motif name: | Gata3_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 5 |
Number of overlap: | 14 |
Similarity score: | 0.0527249 |
Original motif | Reverse complement motif |
Consensus sequence: HBHDVBWGATHBTATCRVBHHH | Consensus sequence: HHHBBMGATAVHATCWVVDHVH |
Motif ID: | UP00539 |
Motif name: | Gli2_v016060_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 1 |
Number of overlap: | 14 |
Similarity score: | 0.0551691 |
Original motif | Reverse complement motif |
Consensus sequence: RTHBSYCGCCMCMYVCGBTVDH | Consensus sequence: HDBABCGBKRGYGGCGMSBHAK |
Motif ID: | UP00005 |
Motif name: | Tcfap2a_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 1 |
Number of overlap: | 14 |
Similarity score: | 0.0560983 |
Original motif | Reverse complement motif |
Consensus sequence: HHRCCBBWGGDCDB | Consensus sequence: BDGHCCWBVGGKDH |
Motif ID: | UP00013 |
Motif name: | Gabpa_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 3 |
Number of overlap: | 14 |
Similarity score: | 0.0566467 |
Original motif | Reverse complement motif |
Consensus sequence: CYDBYWTCCSMHBVVH | Consensus sequence: DBVVDRSGGAWKVHKG |
Motif ID: | UP00075 |
Motif name: | Sox15_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 1 |
Number of overlap: | 14 |
Similarity score: | 0.0577636 |
Original motif | Reverse complement motif |
Consensus sequence: BBVAATGDMATTHVA | Consensus sequence: TVDAATYDCATTVVV |
Motif ID: | UP00096 |
Motif name: | Sox13_secondary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 4 |
Number of overlap: | 14 |
Similarity score: | 0.0587893 |
Original motif | Reverse complement motif |
Consensus sequence: DDDHTGGGTGGGHAHHD | Consensus sequence: DHHTHCCCACCCAHDDH |
Motif ID: | UP00034 |
Motif name: | Sox7_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 3 |
Number of overlap: | 14 |
Similarity score: | 0.0590238 |
Original motif | Reverse complement motif |
Consensus sequence: GTVBDAATTGTVTGHGDDHKVB | Consensus sequence: VVYDDDCHCAVACAATTDBVAC |
Motif ID: | UP00540 |
Motif name: | Gli3_v016060_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 9 |
Number of overlap: | 14 |
Similarity score: | 0.0596904 |
Original motif | Reverse complement motif |
Consensus sequence: VYWVVHCRCCACMCACGAHSBHH | Consensus sequence: HHBSHTCGTGRGTGGKGDBVWMV |
Motif ID: | UP00538 |
Motif name: | Gli1_v015681_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 1 |
Number of overlap: | 14 |
Similarity score: | 0.0597695 |
Original motif | Reverse complement motif |
Consensus sequence: BBBDVVRGACCACCCAVGABBAB | Consensus sequence: BTBVTCVTGGGTGGTCMVVDVBB |
Motif ID: | UP00539 |
Motif name: | Gli2_v015681_secondary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 2 |
Number of overlap: | 14 |
Similarity score: | 0.0598357 |
Original motif | Reverse complement motif |
Consensus sequence: HVGVSAGGAGGGTCYHHHHYVH | Consensus sequence: DVMHHDHKGACCCTCCTSVCBH |
Dataset #: 1 | Motif ID: 16 | Motif name: CTCF |
Original motif | Reverse complement motif |
Consensus sequence: YDRCCASYAGRKGGCRSYV | Consensus sequence: BMSMGCCYMCTKSTGGMHM |
Best Matches for Motif ID 16 (Highest to Lowest)
Motif ID: | UP00400 |
Motif name: | Zif268 |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 1 |
Number of overlap: | 19 |
Similarity score: | 0.0409369 |
Original motif | Reverse complement motif |
Consensus sequence: BADHBDHCGCCCMCGCAHHDBBV | Consensus sequence: VVVDHHTGCGYGGGCGDHVHHTB |
Motif ID: | UP00538 |
Motif name: | Gli1_v016060_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 4 |
Number of overlap: | 19 |
Similarity score: | 0.0409815 |
Original motif | Reverse complement motif |
Consensus sequence: HVBDAGCGBGGGTGGCRDBDDDB | Consensus sequence: BDDHVDKGCCACCCVCGCTDBVH |
Motif ID: | UP00540 |
Motif name: | Gli3_v015681_secondary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 1 |
Number of overlap: | 19 |
Similarity score: | 0.0431951 |
Original motif | Reverse complement motif |
Consensus sequence: DVTTVVCVYGGHGGYCHHDMYB | Consensus sequence: VMYDHDGMCCHCCKBGVVAAVH |
Motif ID: | UP00539 |
Motif name: | Gli2_v016060_secondary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 4 |
Number of overlap: | 19 |
Similarity score: | 0.0469794 |
Original motif | Reverse complement motif |
Consensus sequence: RTHBSYCGCCMCMYVCGBTVDH | Consensus sequence: HDBABCGBKRGYGGCGMSBHAK |
Motif ID: | UP00538 |
Motif name: | Gli1_v016060_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 5 |
Number of overlap: | 19 |
Similarity score: | 0.0482204 |
Original motif | Reverse complement motif |
Consensus sequence: BHCBCBCCGGGTGGTCYHVHDCH | Consensus sequence: HGDHVHKGACCACCCGGBGBGDB |
Motif ID: | UP00540 |
Motif name: | Gli3_v016060_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 4 |
Number of overlap: | 19 |
Similarity score: | 0.0491604 |
Original motif | Reverse complement motif |
Consensus sequence: VYWVVHCRCCACMCACGAHSBHH | Consensus sequence: HHBSHTCGTGRGTGGKGDBVWMV |
Motif ID: | UP00538 |
Motif name: | Gli1_v015681_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 2 |
Number of overlap: | 19 |
Similarity score: | 0.0511535 |
Original motif | Reverse complement motif |
Consensus sequence: BBBDVVRGACCACCCAVGABBAB | Consensus sequence: BTBVTCVTGGGTGGTCMVVDVBB |
Motif ID: | UP00539 |
Motif name: | Gli2_v015681_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 1 |
Number of overlap: | 19 |
Similarity score: | 0.0520741 |
Original motif | Reverse complement motif |
Consensus sequence: HVGVSAGGAGGGTCYHHHHYVH | Consensus sequence: DVMHHDHKGACCCTCCTSVCBH |
Motif ID: | UP00538 |
Motif name: | Gli1_v015681_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 1 |
Number of overlap: | 19 |
Similarity score: | 0.0532334 |
Original motif | Reverse complement motif |
Consensus sequence: MHHHWHYTMCCHCCCACVAABVH | Consensus sequence: DVVTTVGTGGGHGGYAMHWHHHY |
Motif ID: | UP00050 |
Motif name: | Bhlhb2_secondary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 3 |
Number of overlap: | 19 |
Similarity score: | 0.0535675 |
Original motif | Reverse complement motif |
Consensus sequence: YDYBDHTMCACGTGGADDBMDGT | Consensus sequence: ACHRBHDTCCACGTGYAHHBMHM |
Dataset #: 2 | Motif ID: 17 | Motif name: TgTGgTGTCACAGTGCTCC |
Original motif | Reverse complement motif |
Consensus sequence: TGTGGTGTCACAGTGCTCC | Consensus sequence: GGAGCACTGTGACACCACA |
Best Matches for Motif ID 17 (Highest to Lowest)
Motif ID: | UP00098 |
Motif name: | Rfx3_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 2 |
Number of overlap: | 19 |
Similarity score: | 0.043204 |
Original motif | Reverse complement motif |
Consensus sequence: VCTBHBVCTTGGWTACVVVVVDB | Consensus sequence: BDBBVBVGTAWCCAAGVBHBAGB |
Motif ID: | UP00538 |
Motif name: | Gli1_v016060_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 6 |
Number of overlap: | 18 |
Similarity score: | 0.553914 |
Original motif | Reverse complement motif |
Consensus sequence: HVBDAGCGBGGGTGGCRDBDDDB | Consensus sequence: BDDHVDKGCCACCCVCGCTDBVH |
Motif ID: | UP00192 |
Motif name: | Six1 |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 1 |
Number of overlap: | 17 |
Similarity score: | 1.04528 |
Original motif | Reverse complement motif |
Consensus sequence: DHDRGGGTATCAHDHBT | Consensus sequence: AVHDHTGATACCCMDHH |
Motif ID: | UP00193 |
Motif name: | Rhox11_2205.1 |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 1 |
Number of overlap: | 17 |
Similarity score: | 1.0459 |
Original motif | Reverse complement motif |
Consensus sequence: AVDHCGCTGTWAWDVVW | Consensus sequence: WVVHWTWACAGCGHHVT |
Motif ID: | UP00193 |
Motif name: | Rhox11_1765.2 |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 3 |
Number of overlap: | 17 |
Similarity score: | 1.0462 |
Original motif | Reverse complement motif |
Consensus sequence: AVDVCGCTGTWAWDVVW | Consensus sequence: WVVHWTWACAGCGBHBT |
Motif ID: | UP00068 |
Motif name: | Eomes_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 3 |
Number of overlap: | 17 |
Similarity score: | 1.04631 |
Original motif | Reverse complement motif |
Consensus sequence: BVHDAGGTGTGAAAHHH | Consensus sequence: HHHTTTCACACCTDHBV |
Motif ID: | UP00067 |
Motif name: | Lef1_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 2 |
Number of overlap: | 17 |
Similarity score: | 1.04807 |
Original motif | Reverse complement motif |
Consensus sequence: DDDYCCTTTGATCTDDV | Consensus sequence: VDDAGATCAAAGGKDDD |
Motif ID: | UP00540 |
Motif name: | Gli3_v015681_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 3 |
Number of overlap: | 17 |
Similarity score: | 1.04831 |
Original motif | Reverse complement motif |
Consensus sequence: ABBBBVVRGACCACCCACRDBBM | Consensus sequence: YBVDMGTGGGTGGTCKVVBVBBT |
Motif ID: | UP00053 |
Motif name: | Rxra_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 3 |
Number of overlap: | 17 |
Similarity score: | 1.04867 |
Original motif | Reverse complement motif |
Consensus sequence: DBHBDTGACCCCDHVHB | Consensus sequence: VHBHDGGGGTCAHBHBD |
Motif ID: | UP00388 |
Motif name: | Six6_2267.4 |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 1 |
Number of overlap: | 17 |
Similarity score: | 1.0491 |
Original motif | Reverse complement motif |
Consensus sequence: DATRGGGTATCAHDWHT | Consensus sequence: AHWDHTGATACCCKATD |
Dataset #: 2 | Motif ID: 18 | Motif name: sscCCCGCGcs |
Original motif | Reverse complement motif |
Consensus sequence: BSCCCCGCGBS | Consensus sequence: SBCGCGGGGSB |
Best Matches for Motif ID 18 (Highest to Lowest)
Motif ID: | UP00000 |
Motif name: | Smad3_secondary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 5 |
Number of overlap: | 11 |
Similarity score: | 0.00934222 |
Original motif | Reverse complement motif |
Consensus sequence: DHHBCCCCGCCAHHBHB | Consensus sequence: BHBHDTGGCGGGGBDHD |
Motif ID: | UP00006 |
Motif name: | Zic3_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 2 |
Number of overlap: | 11 |
Similarity score: | 0.0105793 |
Original motif | Reverse complement motif |
Consensus sequence: BMCCCCCGGGGGGGB | Consensus sequence: VCCCCCCCGGGGGRB |
Motif ID: | UP00057 |
Motif name: | Zic2_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 4 |
Number of overlap: | 11 |
Similarity score: | 0.0112489 |
Original motif | Reverse complement motif |
Consensus sequence: BMCCCCCGGGGGGGB | Consensus sequence: VCCCCCCCGGGGGRB |
Motif ID: | UP00400 |
Motif name: | Zif268 |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 7 |
Number of overlap: | 11 |
Similarity score: | 0.014467 |
Original motif | Reverse complement motif |
Consensus sequence: BADHBDHCGCCCMCGCAHHDBBV | Consensus sequence: VVVDHHTGCGYGGGCGDHVHHTB |
Motif ID: | UP00526 |
Motif name: | Foxn1_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 4 |
Number of overlap: | 11 |
Similarity score: | 0.0150561 |
Original motif | Reverse complement motif |
Consensus sequence: WHVBVVMACGCGCGTCDYHWDH | Consensus sequence: HDWHMHGACGCGCGTRBVVBHW |
Motif ID: | UP00065 |
Motif name: | Zfp161_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 4 |
Number of overlap: | 11 |
Similarity score: | 0.0169049 |
Original motif | Reverse complement motif |
Consensus sequence: DDGCGCGCGCRCHYRD | Consensus sequence: DMMDGMGCGCGCGCHD |
Motif ID: | UP00102 |
Motif name: | Zic1_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 3 |
Number of overlap: | 11 |
Similarity score: | 0.0186112 |
Original motif | Reverse complement motif |
Consensus sequence: BHCCCCCGGGGGGG | Consensus sequence: CCCCCCCGGGGGHB |
Motif ID: | UP00527 |
Motif name: | Foxn4_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 8 |
Number of overlap: | 11 |
Similarity score: | 0.0192401 |
Original motif | Reverse complement motif |
Consensus sequence: VDWDARRGACGCGGWHGGAKHV | Consensus sequence: VHYTCCDWCCGCGTCMMTHWHV |
Motif ID: | UP00022 |
Motif name: | Zfp740_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 3 |
Number of overlap: | 11 |
Similarity score: | 0.0204596 |
Original motif | Reverse complement motif |
Consensus sequence: HVBCCCCCCCCMHHHB | Consensus sequence: BHHDYGGGGGGGGBVD |
Motif ID: | UP00526 |
Motif name: | Foxn1_secondary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 5 |
Number of overlap: | 11 |
Similarity score: | 0.0232114 |
Original motif | Reverse complement motif |
Consensus sequence: DDRMHBACGCGYGCGTDGBBDB | Consensus sequence: BDVBCDACGCKCGCGTBHRKHD |
Dataset #: 2 | Motif ID: 19 | Motif name: atactttggc |
Original motif | Reverse complement motif |
Consensus sequence: ATACTTTGGC | Consensus sequence: GCCAAAGTAT |
Best Matches for Motif ID 19 (Highest to Lowest)
Motif ID: | UP00156 |
Motif name: | Msx2 |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 4 |
Number of overlap: | 10 |
Similarity score: | 0.0221581 |
Original motif | Reverse complement motif |
Consensus sequence: VVDGACYAATTAGYDHT | Consensus sequence: ADHKCTAATTKGTCDBV |
Motif ID: | UP00101 |
Motif name: | Sox12_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 6 |
Number of overlap: | 10 |
Similarity score: | 0.027519 |
Original motif | Reverse complement motif |
Consensus sequence: VVDBASACAAAGRADH | Consensus sequence: HDTMCTTTGTSTVDBB |
Motif ID: | UP00066 |
Motif name: | Hnf4a_secondary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 6 |
Number of overlap: | 10 |
Similarity score: | 0.0285786 |
Original motif | Reverse complement motif |
Consensus sequence: BBHHAAAGTCCAMTHH | Consensus sequence: HHAYTGGACTTTHDBV |
Motif ID: | UP00418 |
Motif name: | Etv6 |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 5 |
Number of overlap: | 10 |
Similarity score: | 0.030488 |
Original motif | Reverse complement motif |
Consensus sequence: DVHBTACTTCCGGHTHB | Consensus sequence: BHAHCCGGAAGTABDVD |
Motif ID: | UP00083 |
Motif name: | Tcf7l2_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 3 |
Number of overlap: | 10 |
Similarity score: | 0.0314685 |
Original motif | Reverse complement motif |
Consensus sequence: DDDYCCTTTGATSTDDV | Consensus sequence: BDDASATCAAAGGMDDD |
Motif ID: | UP00030 |
Motif name: | Sox11_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 3 |
Number of overlap: | 10 |
Similarity score: | 0.0317293 |
Original motif | Reverse complement motif |
Consensus sequence: HBDDRAACAAAGRABHH | Consensus sequence: HHBTMCTTTGTTMDDVH |
Motif ID: | UP00062 |
Motif name: | Sox4_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 3 |
Number of overlap: | 10 |
Similarity score: | 0.031914 |
Original motif | Reverse complement motif |
Consensus sequence: HBDDDAACAAAGRVBHH | Consensus sequence: HHBBMCTTTGTTHDDBH |
Motif ID: | UP00035 |
Motif name: | Hic1_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 6 |
Number of overlap: | 10 |
Similarity score: | 0.0323012 |
Original motif | Reverse complement motif |
Consensus sequence: DBBATGCCAACCHVHH | Consensus sequence: DDBHGGTTGGCATVBD |
Motif ID: | UP00146 |
Motif name: | Pou6f1_3733.1 |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 4 |
Number of overlap: | 10 |
Similarity score: | 0.032571 |
Original motif | Reverse complement motif |
Consensus sequence: VHHVATAATGAGSTDDH | Consensus sequence: DHDASCTCATTATVHHB |
Motif ID: | UP00067 |
Motif name: | Lef1_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 6 |
Number of overlap: | 10 |
Similarity score: | 0.0330221 |
Original motif | Reverse complement motif |
Consensus sequence: DDDYCCTTTGATCTDDV | Consensus sequence: VDDAGATCAAAGGKDDD |
Dataset #: 2 | Motif ID: 20 | Motif name: CagTGCTCCACTGTGgT |
Original motif | Reverse complement motif |
Consensus sequence: CAGTGCTCCACTGTGBT | Consensus sequence: ABCACAGTGGAGCACTG |
Best Matches for Motif ID 20 (Highest to Lowest)
Motif ID: | UP00539 |
Motif name: | Gli2_v015681_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 4 |
Number of overlap: | 17 |
Similarity score: | 0.0419306 |
Original motif | Reverse complement motif |
Consensus sequence: HTBVVVDGGACCACCCRGRDBG | Consensus sequence: CBDMCMGGGTGGTCCHVBVBAH |
Motif ID: | UP00034 |
Motif name: | Sox7_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 1 |
Number of overlap: | 17 |
Similarity score: | 0.0501904 |
Original motif | Reverse complement motif |
Consensus sequence: HHBDHDDAACAATDRHHHHHBW | Consensus sequence: WBHHHHHMDATTGTTHDHDVHH |
Motif ID: | UP00538 |
Motif name: | Gli1_v016060_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 3 |
Number of overlap: | 17 |
Similarity score: | 0.0504778 |
Original motif | Reverse complement motif |
Consensus sequence: BHCBCBCCGGGTGGTCYHVHDCH | Consensus sequence: HGDHVHKGACCACCCGGBGBGDB |
Motif ID: | UP00022 |
Motif name: | Zfp740_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 1 |
Number of overlap: | 17 |
Similarity score: | 0.0513094 |
Original motif | Reverse complement motif |
Consensus sequence: DDDTWCCCCCCGGDRVH | Consensus sequence: HVKDCCGGGGGGWADDD |
Motif ID: | UP00540 |
Motif name: | Gli3_v015681_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 2 |
Number of overlap: | 17 |
Similarity score: | 0.0516506 |
Original motif | Reverse complement motif |
Consensus sequence: DVTTVVCVYGGHGGYCHHDMYB | Consensus sequence: VMYDHDGMCCHCCKBGVVAAVH |
Motif ID: | UP00528 |
Motif name: | Foxm1_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 3 |
Number of overlap: | 17 |
Similarity score: | 0.0523515 |
Original motif | Reverse complement motif |
Consensus sequence: HADTBVADGATGCATCMTGMVHB | Consensus sequence: VHVRCAYGATGCATCDTVVADTH |
Motif ID: | UP00540 |
Motif name: | Gli3_v016060_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 3 |
Number of overlap: | 17 |
Similarity score: | 0.053668 |
Original motif | Reverse complement motif |
Consensus sequence: HDGHHBHRGACCACCCGSVDVG | Consensus sequence: CVHBSCGGGTGGTCMHVHHCDH |
Motif ID: | UP00050 |
Motif name: | Bhlhb2_secondary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 6 |
Number of overlap: | 17 |
Similarity score: | 0.0539016 |
Original motif | Reverse complement motif |
Consensus sequence: YDYBDHTMCACGTGGADDBMDGT | Consensus sequence: ACHRBHDTCCACGTGYAHHBMHM |
Motif ID: | UP00042 |
Motif name: | Gm397_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 1 |
Number of overlap: | 17 |
Similarity score: | 0.0558205 |
Original motif | Reverse complement motif |
Consensus sequence: HHDATGTGCACATAMDH | Consensus sequence: HHRTATGTGCACATHHD |
Motif ID: | UP00526 |
Motif name: | Foxn1_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 5 |
Number of overlap: | 17 |
Similarity score: | 0.0558674 |
Original motif | Reverse complement motif |
Consensus sequence: DDRMHBACGCGYGCGTDGBBDB | Consensus sequence: BDVBCDACGCKCGCGTBHRKHD |
Dataset #: 2 | Motif ID: 21 | Motif name: AmTGTGACACCACAGT |
Original motif | Reverse complement motif |
Consensus sequence: AMTGTGACACCACAGT | Consensus sequence: ACTGTGGTGTCACART |
Best Matches for Motif ID 21 (Highest to Lowest)
Motif ID: | UP00020 |
Motif name: | Atf1_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 1 |
Number of overlap: | 16 |
Similarity score: | 0.0273934 |
Original motif | Reverse complement motif |
Consensus sequence: DBDRTGACGTCAYHRD | Consensus sequence: DMDMTGACGTCAKHBD |
Motif ID: | UP00159 |
Motif name: | Six2 |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 2 |
Number of overlap: | 16 |
Similarity score: | 0.0303245 |
Original motif | Reverse complement motif |
Consensus sequence: DAKRGGGTATCACDWHT | Consensus sequence: AHWDGTGATACCCMRTD |
Motif ID: | UP00103 |
Motif name: | Jundm2_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 1 |
Number of overlap: | 16 |
Similarity score: | 0.0344928 |
Original motif | Reverse complement motif |
Consensus sequence: BBGATGACGTCAYCVH | Consensus sequence: HVGMTGACGTCATCBB |
Motif ID: | UP00122 |
Motif name: | Tgif1 |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 1 |
Number of overlap: | 16 |
Similarity score: | 0.0348371 |
Original motif | Reverse complement motif |
Consensus sequence: DABWWTGACAGCTVVBD | Consensus sequence: DBVVAGCTGTCAWWVTH |
Motif ID: | UP00195 |
Motif name: | Six3 |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 2 |
Number of overlap: | 16 |
Similarity score: | 0.0349083 |
Original motif | Reverse complement motif |
Consensus sequence: DATRGGGTATCAHHWHT | Consensus sequence: AHWHDTGATACCCKATH |
Motif ID: | UP00388 |
Motif name: | Six6_2267.4 |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 2 |
Number of overlap: | 16 |
Similarity score: | 0.0354092 |
Original motif | Reverse complement motif |
Consensus sequence: DATRGGGTATCAHDWHT | Consensus sequence: AHWDHTGATACCCKATD |
Motif ID: | UP00192 |
Motif name: | Six1 |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 1 |
Number of overlap: | 16 |
Similarity score: | 0.0354313 |
Original motif | Reverse complement motif |
Consensus sequence: DHDRGGGTATCAHDHBT | Consensus sequence: AVHDHTGATACCCMDHH |
Motif ID: | UP00199 |
Motif name: | Six4 |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 2 |
Number of overlap: | 16 |
Similarity score: | 0.0355151 |
Original motif | Reverse complement motif |
Consensus sequence: ADDHATGACACCBHBBV | Consensus sequence: BBVHVGGTGTCATHDDT |
Motif ID: | UP00053 |
Motif name: | Rxra_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 2 |
Number of overlap: | 16 |
Similarity score: | 0.0362492 |
Original motif | Reverse complement motif |
Consensus sequence: DBHBDTGACCCCDHVHB | Consensus sequence: VHBHDGGGGTCAHBHBD |
Motif ID: | UP00388 |
Motif name: | Six6_2267.5 |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 1 |
Number of overlap: | 16 |
Similarity score: | 0.0374881 |
Original motif | Reverse complement motif |
Consensus sequence: DDDRGGGTATCAWHWHT | Consensus sequence: AHWHWTGATACCCKDDD |
Dataset #: 2 | Motif ID: 22 | Motif name: CACTGTGrYrtCACAGTGswsCAcT |
Original motif | Reverse complement motif |
Consensus sequence: CACTGTGRTRTCACAGTGSWSCACT | Consensus sequence: AGTGSWSCACTGTGAMAMCACAGTG |
Best Matches for Motif ID 22 (Highest to Lowest)
Motif ID: | UP00034 |
Motif name: | Sox7_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 2 |
Number of overlap: | 21 |
Similarity score: | 0.0558366 |
Original motif | Reverse complement motif |
Consensus sequence: HHBDHDDAACAATDRHHHHHBW | Consensus sequence: WBHHHHHMDATTGTTHDHDVHH |
Motif ID: | UP00540 |
Motif name: | Gli3_v015681_secondary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 6 |
Number of overlap: | 20 |
Similarity score: | 0.55477 |
Original motif | Reverse complement motif |
Consensus sequence: DVTTVVCVYGGHGGYCHHDMYB | Consensus sequence: VMYDHDGMCCHCCKBGVVAAVH |
Motif ID: | UP00539 |
Motif name: | Gli2_v016060_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 5 |
Number of overlap: | 19 |
Similarity score: | 1.05722 |
Original motif | Reverse complement motif |
Consensus sequence: DTVBDDRGACCACCCAGDWDGBH | Consensus sequence: DBCDWHCTGGGTGGTCMDHBBAH |
Motif ID: | UP00538 |
Motif name: | Gli1_v016060_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 7 |
Number of overlap: | 19 |
Similarity score: | 1.05946 |
Original motif | Reverse complement motif |
Consensus sequence: BHCBCBCCGGGTGGTCYHVHDCH | Consensus sequence: HGDHVHKGACCACCCGGBGBGDB |
Motif ID: | UP00539 |
Motif name: | Gli2_v015681_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 8 |
Number of overlap: | 18 |
Similarity score: | 1.5496 |
Original motif | Reverse complement motif |
Consensus sequence: HTBVVVDGGACCACCCRGRDBG | Consensus sequence: CBDMCMGGGTGGTCCHVBVBAH |
Motif ID: | UP00528 |
Motif name: | Foxm1_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 8 |
Number of overlap: | 18 |
Similarity score: | 1.55149 |
Original motif | Reverse complement motif |
Consensus sequence: HADTBVADGATGCATCMTGMVHB | Consensus sequence: VHVRCAYGATGCATCDTVVADTH |
Motif ID: | UP00540 |
Motif name: | Gli3_v016060_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 8 |
Number of overlap: | 18 |
Similarity score: | 1.55607 |
Original motif | Reverse complement motif |
Consensus sequence: HDGHHBHRGACCACCCGSVDVG | Consensus sequence: CVHBSCGGGTGGTCMHVHHCDH |
Motif ID: | UP00228 |
Motif name: | Bapx1 |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 2 |
Number of overlap: | 17 |
Similarity score: | 2.04247 |
Original motif | Reverse complement motif |
Consensus sequence: VHHAACCACTTAAVVAH | Consensus sequence: DTBVTTAAGTGGTTHHV |
Motif ID: | UP00031 |
Motif name: | Zbtb3_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 3 |
Number of overlap: | 17 |
Similarity score: | 2.04316 |
Original motif | Reverse complement motif |
Consensus sequence: DDBBBCACTGCABTBBB | Consensus sequence: BBBAVTGCAGTGBBVDD |
Motif ID: | UP00193 |
Motif name: | Rhox11_1765.2 |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 4 |
Number of overlap: | 17 |
Similarity score: | 2.04346 |
Original motif | Reverse complement motif |
Consensus sequence: AVDVCGCTGTWAWDVVW | Consensus sequence: WVVHWTWACAGCGBHBT |
Dataset #: 2 | Motif ID: 23 | Motif name: TGGAGCACTGTGACAcCACAGTGg |
Original motif | Reverse complement motif |
Consensus sequence: TGGAGCACTGTGACAVCACAGTGG | Consensus sequence: CCACTGTGVTGTCACAGTGCTCCA |
Best Matches for Motif ID 23 (Highest to Lowest)
Motif ID: | UP00098 |
Motif name: | Rfx3_secondary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 4 |
Number of overlap: | 21 |
Similarity score: | 0.0391954 |
Original motif | Reverse complement motif |
Consensus sequence: VCTBHBVCTTGGWTACVVVVVDB | Consensus sequence: BDBBVBVGTAWCCAAGVBHBAGB |
Motif ID: | UP00540 |
Motif name: | Gli3_v015681_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 3 |
Number of overlap: | 21 |
Similarity score: | 0.0400271 |
Original motif | Reverse complement motif |
Consensus sequence: ABBBBVVRGACCACCCACRDBBM | Consensus sequence: YBVDMGTGGGTGGTCKVVBVBBT |
Motif ID: | UP00539 |
Motif name: | Gli2_v016060_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 5 |
Number of overlap: | 20 |
Similarity score: | 0.535486 |
Original motif | Reverse complement motif |
Consensus sequence: DTVBDDRGACCACCCAGDWDGBH | Consensus sequence: DBCDWHCTGGGTGGTCMDHBBAH |
Motif ID: | UP00538 |
Motif name: | Gli1_v015681_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 5 |
Number of overlap: | 20 |
Similarity score: | 0.536069 |
Original motif | Reverse complement motif |
Consensus sequence: BBBDVVRGACCACCCAVGABBAB | Consensus sequence: BTBVTCVTGGGTGGTCMVVDVBB |
Motif ID: | UP00538 |
Motif name: | Gli1_v016060_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 4 |
Number of overlap: | 20 |
Similarity score: | 0.539704 |
Original motif | Reverse complement motif |
Consensus sequence: BHCBCBCCGGGTGGTCYHVHDCH | Consensus sequence: HGDHVHKGACCACCCGGBGBGDB |
Motif ID: | UP00540 |
Motif name: | Gli3_v015681_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 7 |
Number of overlap: | 18 |
Similarity score: | 1.53819 |
Original motif | Reverse complement motif |
Consensus sequence: DVTTVVCVYGGHGGYCHHDMYB | Consensus sequence: VMYDHDGMCCHCCKBGVVAAVH |
Motif ID: | UP00122 |
Motif name: | Tgif1 |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 3 |
Number of overlap: | 17 |
Similarity score: | 2.02534 |
Original motif | Reverse complement motif |
Consensus sequence: DABWWTGACAGCTVVBD | Consensus sequence: DBVVAGCTGTCAWWVTH |
Motif ID: | UP00159 |
Motif name: | Six2 |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 3 |
Number of overlap: | 17 |
Similarity score: | 2.02571 |
Original motif | Reverse complement motif |
Consensus sequence: DAKRGGGTATCACDWHT | Consensus sequence: AHWDGTGATACCCMRTD |
Motif ID: | UP00192 |
Motif name: | Six1 |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 3 |
Number of overlap: | 17 |
Similarity score: | 2.02892 |
Original motif | Reverse complement motif |
Consensus sequence: DHDRGGGTATCAHDHBT | Consensus sequence: AVHDHTGATACCCMDHH |
Motif ID: | UP00076 |
Motif name: | Rfxdc2_secondary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 4 |
Number of overlap: | 17 |
Similarity score: | 2.0292 |
Original motif | Reverse complement motif |
Consensus sequence: BBVCDTRGAKACSVDDH | Consensus sequence: HDDVSGTRTCMADGBVB |
Dataset #: 2 | Motif ID: 24 | Motif name: ssCCCCGCSssk |
Original motif | Reverse complement motif |
Consensus sequence: SBCCCCGCCSBB | Consensus sequence: BBSGGCGGGGBS |
Best Matches for Motif ID 24 (Highest to Lowest)
Motif ID: | UP00000 |
Motif name: | Smad3_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 3 |
Number of overlap: | 12 |
Similarity score: | 0.0114847 |
Original motif | Reverse complement motif |
Consensus sequence: DHHBCCCCGCCAHHBHB | Consensus sequence: BHBHDTGGCGGGGBDHD |
Motif ID: | UP00093 |
Motif name: | Klf7_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 3 |
Number of overlap: | 12 |
Similarity score: | 0.0165262 |
Original motif | Reverse complement motif |
Consensus sequence: HBDRCCMCGCCCHHHD | Consensus sequence: DHHDGGGCGRGGKHBH |
Motif ID: | UP00022 |
Motif name: | Zfp740_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 3 |
Number of overlap: | 12 |
Similarity score: | 0.0276137 |
Original motif | Reverse complement motif |
Consensus sequence: HVBCCCCCCCCMHHHB | Consensus sequence: BHHDYGGGGGGGGBVD |
Motif ID: | UP00003 |
Motif name: | E2F3_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 2 |
Number of overlap: | 12 |
Similarity score: | 0.0328578 |
Original motif | Reverse complement motif |
Consensus sequence: VHDADGGCGCGCSHW | Consensus sequence: WHSGCGCGCCHTDHB |
Motif ID: | UP00033 |
Motif name: | Zfp410_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 5 |
Number of overlap: | 12 |
Similarity score: | 0.0336734 |
Original motif | Reverse complement motif |
Consensus sequence: BHHBHCCGCCCCDHHHH | Consensus sequence: HHHHDGGGGCGGDBHDV |
Motif ID: | UP00001 |
Motif name: | E2F2_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 3 |
Number of overlap: | 12 |
Similarity score: | 0.0345737 |
Original motif | Reverse complement motif |
Consensus sequence: VHDARGGCGCGCVHH | Consensus sequence: HHVGCGCGCCKTDHB |
Motif ID: | UP00099 |
Motif name: | Ascl2_secondary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 3 |
Number of overlap: | 12 |
Similarity score: | 0.0347468 |
Original motif | Reverse complement motif |
Consensus sequence: BHVDCCCCDCCCBDBH | Consensus sequence: HVDVGGGHGGGGDBHB |
Motif ID: | UP00043 |
Motif name: | Bcl6b_secondary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 3 |
Number of overlap: | 12 |
Similarity score: | 0.0358124 |
Original motif | Reverse complement motif |
Consensus sequence: HBBBCCGCCCCWHHHV | Consensus sequence: BHHHWGGGGCGGBBVH |
Motif ID: | UP00400 |
Motif name: | Zif268 |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 9 |
Number of overlap: | 12 |
Similarity score: | 0.0365354 |
Original motif | Reverse complement motif |
Consensus sequence: BADHBDHCGCCCMCGCAHHDBBV | Consensus sequence: VVVDHHTGCGYGGGCGDHVHHTB |
Motif ID: | UP00526 |
Motif name: | Foxn1_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 6 |
Number of overlap: | 12 |
Similarity score: | 0.0389727 |
Original motif | Reverse complement motif |
Consensus sequence: WHVBVVMACGCGCGTCDYHWDH | Consensus sequence: HDWHMHGACGCGCGTRBVVBHW |
Dataset #: 2 | Motif ID: 25 | Motif name: wwCCAmAGTCmt |
Original motif | Reverse complement motif |
Consensus sequence: DDCCAMAGTCHB | Consensus sequence: VDGACTRTGGDD |
Best Matches for Motif ID 25 (Highest to Lowest)
Motif ID: | UP00079 |
Motif name: | Esrra_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 5 |
Number of overlap: | 12 |
Similarity score: | 0.00927341 |
Original motif | Reverse complement motif |
Consensus sequence: DHDBCAAGGTCAHVBDH | Consensus sequence: HHBVHTGACCTTGVDHD |
Motif ID: | UP00066 |
Motif name: | Hnf4a_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 1 |
Number of overlap: | 12 |
Similarity score: | 0.0157554 |
Original motif | Reverse complement motif |
Consensus sequence: BBHHAAAGTCCAMTHH | Consensus sequence: HHAYTGGACTTTHDBV |
Motif ID: | UP00023 |
Motif name: | Sox30_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 3 |
Number of overlap: | 12 |
Similarity score: | 0.0218941 |
Original motif | Reverse complement motif |
Consensus sequence: DHDBAACAATDRHHHH | Consensus sequence: HHHHMHATTGTTBDHD |
Motif ID: | UP00028 |
Motif name: | Tcfap2e_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 2 |
Number of overlap: | 12 |
Similarity score: | 0.023236 |
Original motif | Reverse complement motif |
Consensus sequence: HHHGCCTSAGGCDAD | Consensus sequence: DTHGCCTSAGGCHHH |
Motif ID: | UP00034 |
Motif name: | Sox7_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 6 |
Number of overlap: | 12 |
Similarity score: | 0.0235871 |
Original motif | Reverse complement motif |
Consensus sequence: HHBDHDDAACAATDRHHHHHBW | Consensus sequence: WBHHHHHMDATTGTTHDHDVHH |
Motif ID: | UP00095 |
Motif name: | Zfp691_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 4 |
Number of overlap: | 12 |
Similarity score: | 0.0240897 |
Original motif | Reverse complement motif |
Consensus sequence: DABBWGACTCCTHDVHV | Consensus sequence: VHBDDAGGAGTCWBBTD |
Motif ID: | UP00004 |
Motif name: | Sox14_secondary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 2 |
Number of overlap: | 12 |
Similarity score: | 0.025783 |
Original motif | Reverse complement motif |
Consensus sequence: BKBASACAATRGHBB | Consensus sequence: BBDCMATTGTSTBRB |
Motif ID: | UP00081 |
Motif name: | Mybl1_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 3 |
Number of overlap: | 12 |
Similarity score: | 0.026472 |
Original motif | Reverse complement motif |
Consensus sequence: HDDDHAACCGTTAHHHD | Consensus sequence: DHHHTAACGGTTHDHDH |
Motif ID: | UP00052 |
Motif name: | Osr2_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 2 |
Number of overlap: | 12 |
Similarity score: | 0.027027 |
Original motif | Reverse complement motif |
Consensus sequence: HHVHACRGTAGCHHHD | Consensus sequence: HHHHGCTACKGTHVHH |
Motif ID: | UP00000 |
Motif name: | Smad3_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 3 |
Number of overlap: | 12 |
Similarity score: | 0.0270662 |
Original motif | Reverse complement motif |
Consensus sequence: HDHDDCCAGACABBHVH | Consensus sequence: HVHBVTGTCTGGDDHDD |
Dataset #: 2 | Motif ID: 26 | Motif name: CAcCACAGTGGAGCAct |
Original motif | Reverse complement motif |
Consensus sequence: CAHCACAGTGGAGCACT | Consensus sequence: AGTGCTCCACTGTGDTG |
Best Matches for Motif ID 26 (Highest to Lowest)
Motif ID: | UP00539 |
Motif name: | Gli2_v015681_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 2 |
Number of overlap: | 17 |
Similarity score: | 0.0381337 |
Original motif | Reverse complement motif |
Consensus sequence: HTBVVVDGGACCACCCRGRDBG | Consensus sequence: CBDMCMGGGTGGTCCHVBVBAH |
Motif ID: | UP00031 |
Motif name: | Zbtb3_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 1 |
Number of overlap: | 17 |
Similarity score: | 0.0393208 |
Original motif | Reverse complement motif |
Consensus sequence: DDBBBCACTGCABTBBB | Consensus sequence: BBBAVTGCAGTGBBVDD |
Motif ID: | UP00034 |
Motif name: | Sox7_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 2 |
Number of overlap: | 17 |
Similarity score: | 0.0441166 |
Original motif | Reverse complement motif |
Consensus sequence: HHBDHDDAACAATDRHHHHHBW | Consensus sequence: WBHHHHHMDATTGTTHDHDVHH |
Motif ID: | UP00538 |
Motif name: | Gli1_v016060_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 4 |
Number of overlap: | 17 |
Similarity score: | 0.0477617 |
Original motif | Reverse complement motif |
Consensus sequence: BHCBCBCCGGGTGGTCYHVHDCH | Consensus sequence: HGDHVHKGACCACCCGGBGBGDB |
Motif ID: | UP00231 |
Motif name: | Nkx2-2 |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 1 |
Number of overlap: | 17 |
Similarity score: | 0.0479423 |
Original motif | Reverse complement motif |
Consensus sequence: HDVRCCACTTGARADBD | Consensus sequence: DVDTKTCAAGTGGKBDH |
Motif ID: | UP00528 |
Motif name: | Foxm1_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 6 |
Number of overlap: | 17 |
Similarity score: | 0.0484681 |
Original motif | Reverse complement motif |
Consensus sequence: HADTBVADGATGCATCMTGMVHB | Consensus sequence: VHVRCAYGATGCATCDTVVADTH |
Motif ID: | UP00540 |
Motif name: | Gli3_v016060_secondary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 1 |
Number of overlap: | 17 |
Similarity score: | 0.0487437 |
Original motif | Reverse complement motif |
Consensus sequence: VYWVVHCRCCACMCACGAHSBHH | Consensus sequence: HHBSHTCGTGRGTGGKGDBVWMV |
Motif ID: | UP00046 |
Motif name: | Tcfe2a_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 1 |
Number of overlap: | 17 |
Similarity score: | 0.048891 |
Original motif | Reverse complement motif |
Consensus sequence: VBHHVCAGGTGCDVDHD | Consensus sequence: DHDBHGCACCTGBDDVB |
Motif ID: | UP00540 |
Motif name: | Gli3_v016060_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 5 |
Number of overlap: | 17 |
Similarity score: | 0.0491352 |
Original motif | Reverse complement motif |
Consensus sequence: HDGHHBHRGACCACCCGSVDVG | Consensus sequence: CVHBSCGGGTGGTCMHVHHCDH |
Motif ID: | UP00540 |
Motif name: | Gli3_v015681_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 4 |
Number of overlap: | 17 |
Similarity score: | 0.0515016 |
Original motif | Reverse complement motif |
Consensus sequence: DVTTVVCVYGGHGGYCHHDMYB | Consensus sequence: VMYDHDGMCCHCCKBGVVAAVH |
Dataset #: 2 | Motif ID: 27 | Motif name: AgTGCTCCACTGTGgTGTCACAgT |
Original motif | Reverse complement motif |
Consensus sequence: AGTGCTCCACTGTGGTGTCACAGT | Consensus sequence: ACTGTGACACCACAGTGGAGCACT |
Best Matches for Motif ID 27 (Highest to Lowest)
Motif ID: | UP00538 |
Motif name: | Gli1_v015681_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 1 |
Number of overlap: | 23 |
Similarity score: | 0.0509731 |
Original motif | Reverse complement motif |
Consensus sequence: BBBDVVRGACCACCCAVGABBAB | Consensus sequence: BTBVTCVTGGGTGGTCMVVDVBB |
Motif ID: | UP00539 |
Motif name: | Gli2_v016060_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 4 |
Number of overlap: | 21 |
Similarity score: | 1.0488 |
Original motif | Reverse complement motif |
Consensus sequence: DTVBDDRGACCACCCAGDWDGBH | Consensus sequence: DBCDWHCTGGGTGGTCMDHBBAH |
Motif ID: | UP00538 |
Motif name: | Gli1_v016060_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 4 |
Number of overlap: | 21 |
Similarity score: | 1.05087 |
Original motif | Reverse complement motif |
Consensus sequence: BHCBCBCCGGGTGGTCYHVHDCH | Consensus sequence: HGDHVHKGACCACCCGGBGBGDB |
Motif ID: | UP00539 |
Motif name: | Gli2_v015681_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 7 |
Number of overlap: | 18 |
Similarity score: | 2.54748 |
Original motif | Reverse complement motif |
Consensus sequence: HTBVVVDGGACCACCCRGRDBG | Consensus sequence: CBDMCMGGGTGGTCCHVBVBAH |
Motif ID: | UP00045 |
Motif name: | Mafb_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 1 |
Number of overlap: | 17 |
Similarity score: | 3.0367 |
Original motif | Reverse complement motif |
Consensus sequence: HAAWDTGCTGACDWARH | Consensus sequence: DMTWDGTCAGCADWTTH |
Motif ID: | UP00055 |
Motif name: | Hbp1_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 2 |
Number of overlap: | 17 |
Similarity score: | 3.04028 |
Original motif | Reverse complement motif |
Consensus sequence: DDDYCCCATTGTVHABH | Consensus sequence: HBTHVACAATGGGMDHD |
Motif ID: | UP00031 |
Motif name: | Zbtb3_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 8 |
Number of overlap: | 17 |
Similarity score: | 3.04347 |
Original motif | Reverse complement motif |
Consensus sequence: DDBBBCACTGCABTBBB | Consensus sequence: BBBAVTGCAGTGBBVDD |
Motif ID: | UP00067 |
Motif name: | Lef1_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 4 |
Number of overlap: | 17 |
Similarity score: | 3.04662 |
Original motif | Reverse complement motif |
Consensus sequence: DDDYCCTTTGATCTDDV | Consensus sequence: VDDAGATCAAAGGKDDD |
Motif ID: | UP00070 |
Motif name: | Gcm1_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 2 |
Number of overlap: | 17 |
Similarity score: | 3.04663 |
Original motif | Reverse complement motif |
Consensus sequence: DDBVHATAGGGGRBRMB | Consensus sequence: BYMBKCCCCTATDVBHD |
Motif ID: | UP00148 |
Motif name: | Hdx |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 8 |
Number of overlap: | 17 |
Similarity score: | 3.04907 |
Original motif | Reverse complement motif |
Consensus sequence: DDKDHGAAATCAHHBHV | Consensus sequence: BDBDHTGATTTCDHYDD |
Dataset #: 2 | Motif ID: 28 | Motif name: ssGCkTGCssk |
Original motif | Reverse complement motif |
Consensus sequence: SSGCKTGCSSK | Consensus sequence: YSSGCAYGCSS |
Best Matches for Motif ID 28 (Highest to Lowest)
Motif ID: | UP00003 |
Motif name: | E2F3_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 1 |
Number of overlap: | 11 |
Similarity score: | 0.00463328 |
Original motif | Reverse complement motif |
Consensus sequence: VHDADGGCGCGCSHW | Consensus sequence: WHSGCGCGCCHTDHB |
Motif ID: | UP00094 |
Motif name: | Zfp128_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 3 |
Number of overlap: | 11 |
Similarity score: | 0.00482124 |
Original motif | Reverse complement motif |
Consensus sequence: BHHDKGGCGTACCCBHD | Consensus sequence: DHVGGGTACGCCRDHDV |
Motif ID: | UP00035 |
Motif name: | Hic1_secondary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 1 |
Number of overlap: | 11 |
Similarity score: | 0.00562779 |
Original motif | Reverse complement motif |
Consensus sequence: DBDDRTGCCCAWDHDV | Consensus sequence: VHHDWTGGGCAMDHBH |
Motif ID: | UP00065 |
Motif name: | Zfp161_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 3 |
Number of overlap: | 11 |
Similarity score: | 0.00595984 |
Original motif | Reverse complement motif |
Consensus sequence: DDGCGCGCGCRCHYRD | Consensus sequence: DMMDGMGCGCGCGCHD |
Motif ID: | UP00001 |
Motif name: | E2F2_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 2 |
Number of overlap: | 11 |
Similarity score: | 0.00821725 |
Original motif | Reverse complement motif |
Consensus sequence: VHDARGGCGCGCVHH | Consensus sequence: HHVGCGCGCCKTDHB |
Motif ID: | UP00060 |
Motif name: | Max_secondary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 1 |
Number of overlap: | 11 |
Similarity score: | 0.0109259 |
Original motif | Reverse complement motif |
Consensus sequence: BBGHCACGCGACDD | Consensus sequence: HDGTCGCGTGDCVB |
Motif ID: | UP00527 |
Motif name: | Foxn4_secondary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 4 |
Number of overlap: | 11 |
Similarity score: | 0.0150199 |
Original motif | Reverse complement motif |
Consensus sequence: VDWDARRGACGCGGWHGGAKHV | Consensus sequence: VHYTCCDWCCGCGTCMMTHWHV |
Motif ID: | UP00002 |
Motif name: | Sp4_secondary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 2 |
Number of overlap: | 11 |
Similarity score: | 0.0160778 |
Original motif | Reverse complement motif |
Consensus sequence: BDWAGGCGTGBCHHD | Consensus sequence: HHDGBCACGCCTWDB |
Motif ID: | UP00526 |
Motif name: | Foxn1_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 3 |
Number of overlap: | 11 |
Similarity score: | 0.0171602 |
Original motif | Reverse complement motif |
Consensus sequence: WHVBVVMACGCGCGTCDYHWDH | Consensus sequence: HDWHMHGACGCGCGTRBVVBHW |
Motif ID: | UP00528 |
Motif name: | Foxm1_secondary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 6 |
Number of overlap: | 11 |
Similarity score: | 0.0172713 |
Original motif | Reverse complement motif |
Consensus sequence: MWSMBAARRATGCDCABHATGD | Consensus sequence: DCATDBTGHGCATKMTTBRSWR |
Dataset #: 2 | Motif ID: 29 | Motif name: cCGCGGrCACG |
Original motif | Reverse complement motif |
Consensus sequence: CCGCGGRCACG | Consensus sequence: CGTGKCCGCGG |
Best Matches for Motif ID 29 (Highest to Lowest)
Motif ID: | UP00065 |
Motif name: | Zfp161_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 2 |
Number of overlap: | 11 |
Similarity score: | 0.0220206 |
Original motif | Reverse complement motif |
Consensus sequence: DDGCGCGCGCRCHYRD | Consensus sequence: DMMDGMGCGCGCGCHD |
Motif ID: | UP00527 |
Motif name: | Foxn4_secondary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 9 |
Number of overlap: | 11 |
Similarity score: | 0.024575 |
Original motif | Reverse complement motif |
Consensus sequence: VDWDARRGACGCGGWHGGAKHV | Consensus sequence: VHYTCCDWCCGCGTCMMTHWHV |
Motif ID: | UP00042 |
Motif name: | Gm397_second |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 3 |
Number of overlap: | 11 |
Similarity score: | 0.0279366 |
Original motif | Reverse complement motif |
Consensus sequence: DVMVGCACACACKCVH | Consensus sequence: HBGYGTGTGTGCVRVD |
Motif ID: | UP00007 |
Motif name: | Egr1_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 2 |
Number of overlap: | 11 |
Similarity score: | 0.0285381 |
Original motif | Reverse complement motif |
Consensus sequence: HCCGCCCCCGCAHB | Consensus sequence: VHTGCGGGGGCGGH |
Motif ID: | UP00050 |
Motif name: | Bhlhb2_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 9 |
Number of overlap: | 11 |
Similarity score: | 0.0335378 |
Original motif | Reverse complement motif |
Consensus sequence: YDYBDHTMCACGTGGADDBMDGT | Consensus sequence: ACHRBHDTCCACGTGYAHHBMHM |
Motif ID: | UP00400 |
Motif name: | Zif268 |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 6 |
Number of overlap: | 11 |
Similarity score: | 0.0340428 |
Original motif | Reverse complement motif |
Consensus sequence: BADHBDHCGCCCMCGCAHHDBBV | Consensus sequence: VVVDHHTGCGYGGGCGDHVHHTB |
Motif ID: | UP00065 |
Motif name: | Zfp161_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 2 |
Number of overlap: | 11 |
Similarity score: | 0.0345855 |
Original motif | Reverse complement motif |
Consensus sequence: GYCGCGCARBGCVB | Consensus sequence: VVGCVMTGCGCGKC |
Motif ID: | UP00097 |
Motif name: | Mtf1_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 3 |
Number of overlap: | 11 |
Similarity score: | 0.0350434 |
Original motif | Reverse complement motif |
Consensus sequence: DBDHCGTGTGCAAMDH | Consensus sequence: HDYTTGCACACGDHBH |
Motif ID: | UP00076 |
Motif name: | Rfxdc2_secondary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 3 |
Number of overlap: | 11 |
Similarity score: | 0.0359928 |
Original motif | Reverse complement motif |
Consensus sequence: BBVCDTRGAKACSVDDH | Consensus sequence: HDDVSGTRTCMADGBVB |
Motif ID: | UP00526 |
Motif name: | Foxn1_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 3 |
Number of overlap: | 11 |
Similarity score: | 0.0361963 |
Original motif | Reverse complement motif |
Consensus sequence: WHVBVVMACGCGCGTCDYHWDH | Consensus sequence: HDWHMHGACGCGCGTRBVVBHW |
Dataset #: 2 | Motif ID: 30 | Motif name: taaacgatgcc |
Original motif | Reverse complement motif |
Consensus sequence: TAAACGATGCC | Consensus sequence: GGCATCGTTTA |
Best Matches for Motif ID 30 (Highest to Lowest)
Motif ID: | UP00114 |
Motif name: | Homez |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 3 |
Number of overlap: | 11 |
Similarity score: | 0.0207645 |
Original motif | Reverse complement motif |
Consensus sequence: AHWWMATCGTTTTBADD | Consensus sequence: HDTVAAAACGATRWWHT |
Motif ID: | UP00061 |
Motif name: | Foxl1_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 1 |
Number of overlap: | 11 |
Similarity score: | 0.0294316 |
Original motif | Reverse complement motif |
Consensus sequence: DWAATRTAAACAAWVVB | Consensus sequence: VVVWTTGTTTAMATTWD |
Motif ID: | UP00039 |
Motif name: | Foxj3_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 1 |
Number of overlap: | 11 |
Similarity score: | 0.030091 |
Original motif | Reverse complement motif |
Consensus sequence: HDHADGTAAACAAAVVH | Consensus sequence: DVVTTTGTTTACDTHDH |
Motif ID: | UP00025 |
Motif name: | Foxk1_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 7 |
Number of overlap: | 11 |
Similarity score: | 0.0306614 |
Original motif | Reverse complement motif |
Consensus sequence: DDAATGTAAACAAAVVB | Consensus sequence: BBVTTTGTTTACATTDD |
Motif ID: | UP00527 |
Motif name: | Foxn4_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 10 |
Number of overlap: | 11 |
Similarity score: | 0.0342477 |
Original motif | Reverse complement motif |
Consensus sequence: DBBVDDDRTRGCGTCBBYTHGA | Consensus sequence: TCDAMVBGACGCMAKDDDVBBD |
Motif ID: | UP00040 |
Motif name: | Irf5_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 3 |
Number of overlap: | 11 |
Similarity score: | 0.0345017 |
Original motif | Reverse complement motif |
Consensus sequence: DDDWAYCGAAACYDV | Consensus sequence: BDKGTTTCGKTWDDD |
Motif ID: | UP00528 |
Motif name: | Foxm1_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 3 |
Number of overlap: | 11 |
Similarity score: | 0.0351616 |
Original motif | Reverse complement motif |
Consensus sequence: HADTBVADGATGCATCMTGMVHB | Consensus sequence: VHVRCAYGATGCATCDTVVADTH |
Motif ID: | UP00232 |
Motif name: | Dobox4 |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 2 |
Number of overlap: | 11 |
Similarity score: | 0.0371486 |
Original motif | Reverse complement motif |
Consensus sequence: HWHWTAGATACCCYWTD | Consensus sequence: DAWKGGGTATCTAWHWH |
Motif ID: | UP00073 |
Motif name: | Foxa2_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 7 |
Number of overlap: | 11 |
Similarity score: | 0.0384798 |
Original motif | Reverse complement motif |
Consensus sequence: HHWAWGTAAAYAAAVDB | Consensus sequence: BDVTTTKTTTACWTWHH |
Motif ID: | UP00011 |
Motif name: | Irf6_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 6 |
Number of overlap: | 11 |
Similarity score: | 0.0388532 |
Original motif | Reverse complement motif |
Consensus sequence: HDDAHCGAAACYAVDDD | Consensus sequence: DHDBTKGTTTCGHTHDD |
Dataset #: 2 | Motif ID: 31 | Motif name: ctatacggacg |
Original motif | Reverse complement motif |
Consensus sequence: CTATACGGACG | Consensus sequence: CGTCCGTATAG |
Best Matches for Motif ID 31 (Highest to Lowest)
Motif ID: | UP00038 |
Motif name: | Spdef_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 3 |
Number of overlap: | 11 |
Similarity score: | 0.027939 |
Original motif | Reverse complement motif |
Consensus sequence: VHRCATCCGGATHHBB | Consensus sequence: VVHHATCCGGATGKHV |
Motif ID: | UP00527 |
Motif name: | Foxn4_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 12 |
Number of overlap: | 11 |
Similarity score: | 0.0308121 |
Original motif | Reverse complement motif |
Consensus sequence: VDWDARRGACGCGGWHGGAKHV | Consensus sequence: VHYTCCDWCCGCGTCMMTHWHV |
Motif ID: | UP00413 |
Motif name: | Elf4 |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 1 |
Number of overlap: | 11 |
Similarity score: | 0.0328673 |
Original motif | Reverse complement motif |
Consensus sequence: DBBHACTTCCGGKWTH | Consensus sequence: HAWYCCGGAAGTHBBD |
Motif ID: | UP00418 |
Motif name: | Etv6 |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 1 |
Number of overlap: | 11 |
Similarity score: | 0.0334005 |
Original motif | Reverse complement motif |
Consensus sequence: DVHBTACTTCCGGHTHB | Consensus sequence: BHAHCCGGAAGTABDVD |
Motif ID: | UP00409 |
Motif name: | Elf5 |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 1 |
Number of overlap: | 11 |
Similarity score: | 0.0336391 |
Original motif | Reverse complement motif |
Consensus sequence: BWAHSMGGAAGTWD | Consensus sequence: DWACTTCCRSDTWV |
Motif ID: | UP00097 |
Motif name: | Mtf1_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 2 |
Number of overlap: | 11 |
Similarity score: | 0.0346533 |
Original motif | Reverse complement motif |
Consensus sequence: DBDHCGTGTGCAAMDH | Consensus sequence: HDYTTGCACACGDHBH |
Motif ID: | UP00135 |
Motif name: | Hoxc12 |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 3 |
Number of overlap: | 11 |
Similarity score: | 0.0360998 |
Original motif | Reverse complement motif |
Consensus sequence: HHRGGTCGTAAAWHBDH | Consensus sequence: DDVHWTTTACGACCKHH |
Motif ID: | UP00084 |
Motif name: | Gmeb1_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 5 |
Number of overlap: | 11 |
Similarity score: | 0.0365466 |
Original motif | Reverse complement motif |
Consensus sequence: BHBBKKACGTMMVDBVB | Consensus sequence: BVVDVRYACGTRYVBHB |
Motif ID: | UP00015 |
Motif name: | Ehf_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 2 |
Number of overlap: | 11 |
Similarity score: | 0.0367131 |
Original motif | Reverse complement motif |
Consensus sequence: VBDABCCGGAAGTDD | Consensus sequence: DDACTTCCGGBTHBB |
Motif ID: | UP00421 |
Motif name: | Etv1 |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 2 |
Number of overlap: | 11 |
Similarity score: | 0.0373 |
Original motif | Reverse complement motif |
Consensus sequence: MVHBACCGGAAGTVDVH | Consensus sequence: HBDBACTTCCGGTBHVY |
Dataset #: 2 | Motif ID: 32 | Motif name: gCGCGCsCgsG |
Original motif | Reverse complement motif |
Consensus sequence: GCGCGCSCGCG | Consensus sequence: CGCGSGCGCGC |
Best Matches for Motif ID 32 (Highest to Lowest)
Motif ID: | UP00065 |
Motif name: | Zfp161_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 2 |
Number of overlap: | 11 |
Similarity score: | 0 |
Original motif | Reverse complement motif |
Consensus sequence: DDGCGCGCGCRCHYRD | Consensus sequence: DMMDGMGCGCGCGCHD |
Motif ID: | UP00003 |
Motif name: | E2F3_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 5 |
Number of overlap: | 11 |
Similarity score: | 0.0102009 |
Original motif | Reverse complement motif |
Consensus sequence: VHDADGGCGCGCSHW | Consensus sequence: WHSGCGCGCCHTDHB |
Motif ID: | UP00001 |
Motif name: | E2F2_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 1 |
Number of overlap: | 11 |
Similarity score: | 0.0124455 |
Original motif | Reverse complement motif |
Consensus sequence: VHDARGGCGCGCVHH | Consensus sequence: HHVGCGCGCCKTDHB |
Motif ID: | UP00526 |
Motif name: | Foxn1_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 8 |
Number of overlap: | 11 |
Similarity score: | 0.0192204 |
Original motif | Reverse complement motif |
Consensus sequence: WHVBVVMACGCGCGTCDYHWDH | Consensus sequence: HDWHMHGACGCGCGTRBVVBHW |
Motif ID: | UP00526 |
Motif name: | Foxn1_secondary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 8 |
Number of overlap: | 11 |
Similarity score: | 0.0231982 |
Original motif | Reverse complement motif |
Consensus sequence: DDRMHBACGCGYGCGTDGBBDB | Consensus sequence: BDVBCDACGCKCGCGTBHRKHD |
Motif ID: | UP00007 |
Motif name: | Egr1_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Backward |
Position number: | 3 |
Number of overlap: | 11 |
Similarity score: | 0.0289369 |
Original motif | Reverse complement motif |
Consensus sequence: HCCGCCCCCGCAHB | Consensus sequence: VHTGCGGGGGCGGH |
Motif ID: | UP00400 |
Motif name: | Zif268 |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 7 |
Number of overlap: | 11 |
Similarity score: | 0.0297254 |
Original motif | Reverse complement motif |
Consensus sequence: BADHBDHCGCCCMCGCAHHDBBV | Consensus sequence: VVVDHHTGCGYGGGCGDHVHHTB |
Motif ID: | UP00088 |
Motif name: | Plagl1_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 2 |
Number of overlap: | 11 |
Similarity score: | 0.0316913 |
Original motif | Reverse complement motif |
Consensus sequence: BHDGGGGSSCCCCBVV | Consensus sequence: VBVGGGGSSCCCCHHV |
Motif ID: | UP00002 |
Motif name: | Sp4_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 3 |
Number of overlap: | 11 |
Similarity score: | 0.0323627 |
Original motif | Reverse complement motif |
Consensus sequence: BDHHMCGCCCCCTHVBB | Consensus sequence: BVVHAGGGGGCGRDHHB |
Motif ID: | UP00527 |
Motif name: | Foxn4_secondary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 7 |
Number of overlap: | 11 |
Similarity score: | 0.039112 |
Original motif | Reverse complement motif |
Consensus sequence: VDWDARRGACGCGGWHGGAKHV | Consensus sequence: VHYTCCDWCCGCGTCMMTHWHV |
Dataset #: 2 | Motif ID: 33 | Motif name: srACyCCGAyr |
Original motif | Reverse complement motif |
Consensus sequence: SRACYCCGAYR | Consensus sequence: KKTCGGKGTKS |
Best Matches for Motif ID 33 (Highest to Lowest)
Motif ID: | UP00024 |
Motif name: | Glis2_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 4 |
Number of overlap: | 11 |
Similarity score: | 0.0129914 |
Original motif | Reverse complement motif |
Consensus sequence: HHHVGACCCCCCVBRD | Consensus sequence: HKBBGGGGGGTCVHHH |
Motif ID: | UP00527 |
Motif name: | Foxn4_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 7 |
Number of overlap: | 11 |
Similarity score: | 0.013032 |
Original motif | Reverse complement motif |
Consensus sequence: VDWDARRGACGCGGWHGGAKHV | Consensus sequence: VHYTCCDWCCGCGTCMMTHWHV |
Motif ID: | UP00070 |
Motif name: | Gcm1_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 5 |
Number of overlap: | 11 |
Similarity score: | 0.0132459 |
Original motif | Reverse complement motif |
Consensus sequence: DDBVHATAGGGGRBRMB | Consensus sequence: BYMBKCCCCTATDVBHD |
Motif ID: | UP00070 |
Motif name: | Gcm1_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 3 |
Number of overlap: | 11 |
Similarity score: | 0.0135374 |
Original motif | Reverse complement motif |
Consensus sequence: HVVHACCCGCATVDHD | Consensus sequence: DHDVATGCGGGTHVVH |
Motif ID: | UP00021 |
Motif name: | Zfp281_secondary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 4 |
Number of overlap: | 11 |
Similarity score: | 0.0136908 |
Original motif | Reverse complement motif |
Consensus sequence: DKKWDACCCCCAHTDDV | Consensus sequence: VDDAHTGGGGGTHWYYD |
Motif ID: | UP00047 |
Motif name: | Zbtb7b_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 3 |
Number of overlap: | 11 |
Similarity score: | 0.0146089 |
Original motif | Reverse complement motif |
Consensus sequence: DDVCCCCCCHAAWHB | Consensus sequence: VHWTTHGGGGGGVDD |
Motif ID: | UP00040 |
Motif name: | Irf5_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Forward |
Position number: | 5 |
Number of overlap: | 11 |
Similarity score: | 0.0148195 |
Original motif | Reverse complement motif |
Consensus sequence: DDDWAYCGAAACYDV | Consensus sequence: BDKGTTTCGKTWDDD |
Motif ID: | UP00540 |
Motif name: | Gli3_v015681_primary |
Species: | Mus musculus |
Matching format of first motif: | Original Motif |
Matching format of second motif: | Original Motif |
Direction: | Forward |
Position number: | 9 |
Number of overlap: | 11 |
Similarity score: | 0.014859 |
Original motif | Reverse complement motif |
Consensus sequence: ABBBBVVRGACCACCCACRDBBM | Consensus sequence: YBVDMGTGGGTGGTCKVVBVBBT |
Motif ID: | UP00021 |
Motif name: | Zfp281_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 5 |
Number of overlap: | 11 |
Similarity score: | 0.0153296 |
Original motif | Reverse complement motif |
Consensus sequence: DBCCCCCCCCCCMYC | Consensus sequence: GKRGGGGGGGGGGBD |
Motif ID: | UP00539 |
Motif name: | Gli2_v016060_primary |
Species: | Mus musculus |
Matching format of first motif: | Reverse Complement |
Matching format of second motif: | Reverse Complement |
Direction: | Backward |
Position number: | 10 |
Number of overlap: | 11 |
Similarity score: | 0.0155548 |
Original motif | Reverse complement motif |
Consensus sequence: DTVBDDRGACCACCCAGDWDGBH | Consensus sequence: DBCDWHCTGGGTGGTCMDHBBAH |
Results created by MOTIFSIM on 11-19-2016 15:10:45
Runtime: 649.633 seconds
MOTIFSIM is written by Ngoc Tam L. Tran
Motif logo generated by weblogo