**************************************************************************************************************************************************************************************************** MOTIFSIM - Motif Similarity Detection Tool Version 2.1 **************************************************************************************************************************************************************************************************** INPUT **************************************************************************************************************************************************************************************************** Input Parameters Number of files: 1 Number of top significant motifs: 10 Number of best matches: 5 Similarity cutoff: >= 0.75 Matching motif database: UniProbe Mus Musculus Phylogenetic tree: Yes Combined similar motifs: Yes Output file type: All Output file format: All Input files and motif counts File name Count of motifs Dataset # CisFinder_DM721_Cluster.txt 153 1 **************************************************************************************************************************************************************************************************** RESULTS **************************************************************************************************************************************************************************************************** *************************************************************** Combined Motifs for Top Best Match Motif ID 1 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C001 C002 Reverse Complement Reverse Complement WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW MKKTKKGTGTGTGTGTGTKKKTA HTKTKTKTKTKTKTKTKTKTKWWWWHTTTT Direction: Backward Position #: 1 Overlap #: 23 Alignment: WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW -------MKKTKKGTGTGTGTGTGTKKKTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C010 Combined Motif Reverse Complement Original Motif AAAAHWWWWRARARARAYARAYARARARAH WWWAAAAWWAAAAAAAAAAWW AAAAHWWWWAAAADAAAAAAAHAAAAARAH Direction: Forward Position #: 7 Overlap #: 21 Alignment: AAAAHWWWWRARARARAYARAYARARARAH ------WWWAAAAWWAAAAAAAAAAWW--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C016 Combined Motif Original Motif Original Motif AAAAHWWWWAAAADAAAAAAAHAAAAARAH HWAAWAAAHWAAMAWAMAAWW AAAAHWHWAAAAAAHWAAAAAAAAAAWRAH Direction: Forward Position #: 7 Overlap #: 21 Alignment: AAAAHWWWWAAAADAAAAAAAHAAAAARAH ------HWAAWAAAHWAAMAWAMAAWW--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C030 Combined Motif Reverse Complement Reverse Complement HTKWTTTTTTTTTTWHTTTTTTWHWHTTTT YTWTTTTTTTTYTTTTTMW HTKWTTTTWTTTTTTTTTTTTTTHWHTTTT Direction: Forward Position #: 7 Overlap #: 19 Alignment: HTKWTTTTTTTTTTWHTTTTTTWHWHTTTT ------YTWTTTTTTTTYTTTTTMW----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C069 Combined Motif Reverse Complement Original Motif AAAAHWHAAAAAAAAAAAAAAWAAAAWRAH AHAAMAAYWDYAAMAAHD AAAAHWHWAAAAAHAAHAAAAAHAAAWRAH Direction: Forward Position #: 7 Overlap #: 18 Alignment: AAAAHWHAAAAAAAAAAAAAAWAAAAWRAH ------AHAAMAAYWDYAAMAAHD------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C057 Combined Motif Reverse Complement Reverse Complement HTKWTTTHTTTTTHTTHTTTTTWHWHTTTT HWTRTTMKTYTTMKTYKW HTTDTTHDTTTTWDTTDTTTTTWHWHTTTT Direction: Forward Position #: 1 Overlap #: 18 Alignment: HTKWTTTHTTTTTHTTHTTTTTWHWHTTTT HWTRTTMKTYTTMKTYKW------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 2 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C002 C001 Reverse Complement Reverse Complement MKKTKKGTGTGTGTGTGTKKKTA WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW TTWWWMTKTKTDTKTKTKTKTKTDTTTWWW Direction: Backward Position #: 6 Overlap #: 23 Alignment: --MKKTKKGTGTGTGTGTGTKKKTA----- WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 3 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 C004 Original Motif Original Motif GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC SSSSSCSSSSSCCSSSSCCSCSSSSSS GSCCCBSSCYSCCSCCCCCCSSCCCCSSSC Direction: Forward Position #: 1 Overlap #: 27 Alignment: GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC SSSSSCSSSSSCCSSSSCCSCSSSSSS--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C002 Combined Motif Reverse Complement Reverse Complement GSSSGGGGSSGGGGGGSGGSKGSSBGGGSC MKKTKKGTGTGTGTGTGTKKKTA GSSSGGVKGBGGGKGKGKGTGKGKKKKBVC Direction: Forward Position #: 7 Overlap #: 23 Alignment: GSSSGGGGSSGGGGGGSGGSKGSSBGGGSC ------MKKTKKGTGTGTGTGTGTKKKTA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C020 Combined Motif Original Motif Reverse Complement GSSSGGVKGBGGGKGKGKGTGKGKKKKBVC SGTGGGSGVGGSGGVGSB GSSSGGVGBGGGGGGGGBGGVKSBKKKBVC Direction: Forward Position #: 7 Overlap #: 18 Alignment: GSSSGGVKGBGGGKGKGKGTGKGKKKKBVC ------SGTGGGSGVGGSGGVGSB------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C037 Reverse Complement Original Motif GVBYYYBSYVCCBCCCCCCCCBCVCCSSSC SVCCGBCMCCSYCMCCVB SVCCBBCVCCBCCCCCBSCCCBCVCCSSSC Direction: Forward Position #: 1 Overlap #: 18 Alignment: GVBYYYBSYVCCBCCCCCCCCBCVCCSSSC SVCCGBCMCCSYCMCCVB------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C012 Original Motif Reverse Complement SVCCBBCVCCBCCCCCBSCCCBCVCCSSSC YRTCTCTCTCTRYCTCTRR BRYCTCYCYCBVYCYCBVVCCBCVCCSSSC Direction: Forward Position #: 1 Overlap #: 19 Alignment: SVCCBBCVCCBCCCCCBSCCCBCVCCSSSC YRTCTCTCTCTRYCTCTRR----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 4 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C004 C003 Reverse Complement Reverse Complement SSSSSSGSGGSSSSGGSSSSSGSSSSS GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC CSSGGGGSSGGGGGSGGGVVGGSVGKGSGS Direction: Backward Position #: 2 Overlap #: 27 Alignment: --SSSSSSGSGGSSSSGGSSSSSGSSSSS- GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C012 Original Motif Original Motif CSSGGGGSSGGGGGSGGGVVGGSVGKGSGS MKAGAGMKAGAGAGAGAKM CBVGRGVKVGRGVGRGRKVVGGSVGKGSGS Direction: Forward Position #: 1 Overlap #: 19 Alignment: CSSGGGGSSGGGGGSGGGVVGGSVGKGSGS MKAGAGMKAGAGAGAGAKM----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C037 Combined Motif Reverse Complement Original Motif SCSCYCVSCCVVYMCKCVCMCBYVCMCBBG SVCCGBCMCCSYCMCCVB SCCCBCCVCCVBCMCCVVCMCBYVCMCBBG Direction: Forward Position #: 1 Overlap #: 18 Alignment: SCSCYCVSCCVVYMCKCVCMCBYVCMCBBG SVCCGBCMCCSYCMCCVB------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C020 Combined Motif Original Motif Original Motif SCCCBCCVCCVBCMCCVVCMCBYVCMCBBG BSCVCCSCCVCSCCCACS SCCCBCSSCVCCSCCBCSCCCDCSCMCBBG Direction: Forward Position #: 7 Overlap #: 18 Alignment: SCCCBCCVCCVBCMCCVVCMCBYVCMCBBG ------BSCVCCSCCVCSCCCACS------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C124 Combined Motif Original Motif Reverse Complement SCCCBCSSCVCCSCCBCSCCCDCSCMCBBG WSGASKSCAGCSMSGTSW SCCCBCHSSASBSCMGCSCCSHCHCMCBBG Direction: Forward Position #: 7 Overlap #: 18 Alignment: SCCCBCSSCVCCSCCBCSCCCDCSCMCBBG ------WSGASKSCAGCSMSGTSW------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 5 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C005 C013 Original Motif Original Motif TCTGTAGMCCAGGCTGGCCTYGW WVCTGGAACTCACTHTGTAGACCAGGM WYCTGKARCYCASKCTGKMSWCSAGGM Direction: Forward Position #: 2 Overlap #: 23 Alignment: -TCTGTAGMCCAGGCTGGCCTYGW--- WVCTGGAACTCACTHTGTAGACCAGGM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C007 Original Motif Original Motif WYCTGKARCYCASKCTGKMSWCSAGGM KTTSTGAGTTCVAGGMCAGCCTS KWYCTGRRDYCCAGGCYRGCCWSSAGGM Direction: Forward Position #: 2 Overlap #: 22 Alignment: -WYCTGKARCYCASKCTGKMSWCSAGGM KTTSTGAGTTCVAGGMCAGCCTS----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C027 Original Motif Original Motif KWYCTGRRDYCCAGGCYRGCCWSSAGGM MRCAGRGAAACCCTGTCTYDW MDHAVDGARACCCWGKCTVDHCWSSAGGM Direction: Forward Position #: 2 Overlap #: 20 Alignment: -KWYCTGRRDYCCAGGCYRGCCWSSAGGM MRCAGRGAAACCCTGTCTYDW-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C015 Original Motif Reverse Complement MDHAVDGARACCCWGKCTVDHCWSSAGGM RGCTVTGTAGCCYWGGCTVD VGCTVTGWARCCCWGGCTVDHCWSSAGGM Direction: Forward Position #: 1 Overlap #: 20 Alignment: MDHAVDGARACCCWGKCTVDHCWSSAGGM RGCTVTGTAGCCYWGGCTVD--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C009 Original Motif Original Motif VGCTVTGWARCCCWGGCTVDHCWSSAGGM ABGCCTTTAATCCCAGCACTHR ABVYCTKTAAYCCYRGCWCTHVWSSAGGM Direction: Forward Position #: 1 Overlap #: 22 Alignment: VGCTVTGWARCCCWGGCTVDHCWSSAGGM ABGCCTTTAATCCCAGCACTHR------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 6 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C006 C002 Reverse Complement Reverse Complement WSWGTGTGWSTGTGTGWS MKKTKKGTGTGTGTGTGTKKKTA TATGTGTGTGTGTGTGTGTBMKK Direction: Backward Position #: 3 Overlap #: 18 Alignment: ---WSWGTGTGWSTGTGTGWS-- MKKTKKGTGTGTGTGTGTKKKTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C017 Combined Motif Reverse Complement Original Motif YRYBACACACACACACACACATA WSWGAGASWSAGAGASWS YRYBWSASASASASASASASWBA Direction: Forward Position #: 5 Overlap #: 18 Alignment: YRYBACACACACACACACACATA ----WSWGAGASWSAGAGASWS- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C016 Reverse Complement Reverse Complement TBWSTSTSTSTSTSTSTSWBMKK WWTTYTWTYTTWDTTTWTTWH WTBTBTDTBTBWGTBTBTBWVMKK Direction: Forward Position #: 2 Overlap #: 20 Alignment: -TBWSTSTSTSTSTSTSTSWBMKK WWTTYTWTYTTWDTTTWTTWH--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C012 Reverse Complement Original Motif YRYVWVABAVACWVABADABAVAW MKAGAGMKAGAGAGAGAKM MKHRHGHDAGAGABAGAKADABAVAW Direction: Forward Position #: 3 Overlap #: 17 Alignment: --YRYVWVABAVACWVABADABAVAW MKAGAGMKAGAGAGAGAKM------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C037 Original Motif Reverse Complement MKHRHGHDAGAGABAGAKADABAVAW BVGGYGKSGGYGBCGGVS VBVGHGDVRGHGVVRGABADABAVAW Direction: Forward Position #: 1 Overlap #: 18 Alignment: MKHRHGHDAGAGABAGAKADABAVAW BVGGYGKSGGYGBCGGVS-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 7 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C007 C019 Reverse Complement Reverse Complement SAGGCTGYCCTVGAACTCASAAY CTGCCTCCCAAGTGCTGGGMWR MKGCYKCCCWAGWRCTSRGAAVS Direction: Backward Position #: 1 Overlap #: 22 Alignment: SAGGCTGYCCTVGAACTCASAAY -CTGCCTCCCAAGTGCTGGGMWR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C005 Original Motif Reverse Complement MKGCYKCCCWAGWRCTSRGAAVS WCKAGGCCAGCCTGGYCTACAGA WCKAGGCCDSCCTRGHCYWCAGAAVS Direction: Forward Position #: 4 Overlap #: 20 Alignment: ---MKGCYKCCCWAGWRCTSRGAAVS WCKAGGCCAGCCTGGYCTACAGA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C009 Combined Motif Reverse Complement Reverse Complement SVTTCTGWKGHCMAGGSDGGCCTYGW MHAGTGCTGGGATTAAAGGCBT SVTTCTGWKGHCMAGGSDGGCCHMGTGCTGGGATTAAAGGCBT Direction: Forward Position #: 22 Overlap #: 5 Alignment: SVTTCTGWKGHCMAGGSDGGCCTYGW----------------- ---------------------MHAGTGCTGGGATTAAAGGCBT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C015 Original Motif Reverse Complement SVTTCTGWKGHCMAGGSDGGCCHMGTGCTGGGATTAAAGGCBT RGCTVTGTAGCCYWGGCTVD VDCTVTGTDGHCCWGGCTGGCCHMGTGCTGGGATTAAAGGCBT Direction: Forward Position #: 1 Overlap #: 20 Alignment: SVTTCTGWKGHCMAGGSDGGCCHMGTGCTGGGATTAAAGGCBT RGCTVTGTAGCCYWGGCTVD----------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C042 Reverse Complement Original Motif ABGCCTTTAATCCCAGCACYHGGCCAGCCWGGDCDACAVAGHV WGTCCKRGAACYMACTCW WGKCCTDKAAYCCMMKCWCYHGGCCAGCCWGGDCDACAVAGHV Direction: Forward Position #: 1 Overlap #: 18 Alignment: ABGCCTTTAATCCCAGCACYHGGCCAGCCWGGDCDACAVAGHV WGTCCKRGAACYMACTCW------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 8 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C008 C003 Original Motif Original Motif SSCCSSCCCCSSCCSS GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC CSSCVCCCCSCCCCSSCCCCGSCYCHSCCY Direction: Backward Position #: 5 Overlap #: 16 Alignment: ----------SSCCSSCCCCSSCCSS---- GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C004 Combined Motif Reverse Complement Reverse Complement MGGSHGKGSCGGGGSSGGGGSGGGGVGSSG SSSSSSGSGGSSSSGGSSSSSGSSSSS MGGSHGBGSSSGGGGGGGGGGGGGSSGSSSSSS Direction: Forward Position #: 7 Overlap #: 24 Alignment: MGGSHGKGSCGGGGSSGGGGSGGGGVGSSG--- ------SSSSSSGSGGSSSSGGSSSSSGSSSSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C020 Combined Motif Reverse Complement Original Motif SSSSSSCSSCCCCCCCCCCCCCSSSCBCHSCCY BSCVCCSCCVCSCCCACS SSCVCCSCCCCSCCCVCCCCCCSSSCBCHSCCY Direction: Forward Position #: 1 Overlap #: 18 Alignment: SSSSSSCSSCCCCCCCCCCCCCSSSCBCHSCCY BSCVCCSCCVCSCCCACS--------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C037 Combined Motif Original Motif Original Motif SSCVCCSCCCCSCCCVCCCCCCSSSCBCHSCCY SVCCGBCMCCSYCMCCVB SSCCSCCCCCSSCMCCSSCCCCSSSCBCHSCCY Direction: Forward Position #: 1 Overlap #: 18 Alignment: SSCVCCSCCCCSCCCVCCCCCCSSSCBCHSCCY SVCCGBCMCCSYCMCCVB--------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C140 Combined Motif Reverse Complement Reverse Complement MGGSHGBGSSSGGGGSSGGRGSSGGGGGSGGSS CVDMGGBSSSVGBGGSB MGBVGGBSSSSGGGGSSGGRGSSGGGGGSGGSS Direction: Forward Position #: 1 Overlap #: 17 Alignment: MGGSHGBGSSSGGGGSSGGRGSSGGGGGSGGSS CVDMGGBSSSVGBGGSB---------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 9 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C009 C027 Original Motif Original Motif ABGCCTTTAATCCCAGCACTHR MRCAGRGAAACCCTGTCTYDW HRCMKDKAAWCCCWGYMYYDDA Direction: Backward Position #: 1 Overlap #: 21 Alignment: ABGCCTTTAATCCCAGCACTHR -MRCAGRGAAACCCTGTCTYDW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C007 Original Motif Original Motif HRCMKDKAAWCCCWGYMYYDDA KTTSTGAGTTCVAGGMCAGCCTS KTTSTGMVTTBAADSCCAGCCYBDDA Direction: Forward Position #: 5 Overlap #: 19 Alignment: ----HRCMKDKAAWCCCWGYMYYDDA KTTSTGAGTTCVAGGMCAGCCTS--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C015 Reverse Complement Reverse Complement TDDBMGGCTGGSHTTBAAVYCASAAY RGCTVTGTAGCCYWGGCTVD RGCTBTGTAGBCTKGGCTBDAAVYCASAAY Direction: Forward Position #: 5 Overlap #: 16 Alignment: ----TDDBMGGCTGGSHTTBAAVYCASAAY RGCTVTGTAGCCYWGGCTVD---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C012 Combined Motif Original Motif Original Motif RGCTBTGTAGBCTKGGCTBDAAVYCASAAY MKAGAGMKAGAGAGAGAKM RGCTBTVKAGVSHKRGMKVBARMTMASAAY Direction: Forward Position #: 7 Overlap #: 19 Alignment: RGCTBTGTAGBCTKGGCTBDAAVYCASAAY ------MKAGAGMKAGAGAGAGAKM----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C005 Combined Motif Original Motif Original Motif RGCTBTVKAGVSHKRGMKVBARMTMASAAY TCTGTAGMCCAGGCTGGCCTYGW RGCTBTGTAGVCCDGGCTGGMVHYVWSAAY Direction: Forward Position #: 4 Overlap #: 23 Alignment: RGCTBTVKAGVSHKRGMKVBARMTMASAAY ---TCTGTAGMCCAGGCTGGCCTYGW---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 10 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C010 C001 Reverse Complement Reverse Complement WWTTTTTTTTTTWWTTTTWWW WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW WWHTTTTWWWTTTTTTTTTTWWTTTTTWWW Direction: Forward Position #: 9 Overlap #: 21 Alignment: --------WWTTTTTTTTTTWWTTTTWWW- WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C016 Combined Motif Reverse Complement Original Motif WWWAAAAAWWAAAAAAAAAAWWWAAAAHWW HWAAWAAAHWAAMAWAMAAWW WWAAAAAAHWAAAAAAAAAAWWWAAAAHWW Direction: Forward Position #: 1 Overlap #: 21 Alignment: WWWAAAAAWWAAAAAAAAAAWWWAAAAHWW HWAAWAAAHWAAMAWAMAAWW--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C002 Combined Motif Reverse Complement Reverse Complement WWHTTTTWWWTTTTTTTTTTWHTTTTTTWW MKKTKKGTGTGTGTGTGTKKKTA WWHTTHTKTDTKTKTKTKTKTDTKTKTWWW Direction: Forward Position #: 6 Overlap #: 23 Alignment: WWHTTTTWWWTTTTTTTTTTWHTTTTTTWW -----MKKTKKGTGTGTGTGTGTKKKTA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C030 Combined Motif Original Motif Reverse Complement WWHTTHTKTDTKTKTKTKTKTDTKTKTWWW YTWTTTTTTTTYTTTTTMW HWHTTYTTTTTTTKTTTHTKTDTKTKTWWW Direction: Forward Position #: 1 Overlap #: 19 Alignment: WWHTTHTKTDTKTKTKTKTKTDTKTKTWWW YTWTTTTTTTTYTTTTTMW----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C012 Combined Motif Original Motif Reverse Complement HWHTTYTTTTTTTKTTTHTKTDTKTKTWWW YRTCTCTCTCTRYCTCTRR YDHYTYTBTBTDTBTBTDDKTDTKTKTWWW Direction: Forward Position #: 1 Overlap #: 19 Alignment: HWHTTYTTTTTTTKTTTHTKTDTKTKTWWW YRTCTCTCTCTRYCTCTRR----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 11 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C011 C012 Original Motif Original Motif KMGAGAKMGAGAGAGAKM MKAGAGMKAGAGAGAGAKM KMGAGAKAGAGAGAGAKMM Direction: Backward Position #: 1 Overlap #: 18 Alignment: -KMGAGAKMGAGAGAGAKM MKAGAGMKAGAGAGAGAKM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C030 Original Motif Original Motif KMGAGAKAGAGAGAGAKMM WYAAAAAMAAAAAAAAWAM DHRAVADMRAVADARATMM Direction: Forward Position #: 1 Overlap #: 19 Alignment: KMGAGAKAGAGAGAGAKMM WYAAAAAMAAAAAAAAWAM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C095 Original Motif Original Motif DHRAVADMRAVADARATMM KCCAKMSTGGTSKMCAGM KCCADMVWGRBVDMVADMM Direction: Forward Position #: 1 Overlap #: 18 Alignment: DHRAVADMRAVADARATMM KCCAKMSTGGTSKMCAGM- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C034 Original Motif Original Motif KCCADMVWGRBVDMVADMM SCACTGSGGAGSMAGAGS BCVMTVSDGAGVVAGAGVM Direction: Forward Position #: 1 Overlap #: 18 Alignment: KCCADMVWGRBVDMVADMM SCACTGSGGAGSMAGAGS- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Reverse Complement Original Motif YVCTCTVVCTCHSVARBGB GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC BSCTCTBCCTVCCHVVYSCCSSCCCCCSSC Direction: Forward Position #: 1 Overlap #: 19 Alignment: YVCTCTVVCTCHSVARBGB----------- GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 12 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C012 C003 Original Motif Reverse Complement MKAGAGMKAGAGAGAGAKM GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC SCVGRGRGVKRGAVRGVVRKVGSSGGGGGS Direction: Backward Position #: 3 Overlap #: 19 Alignment: ---------MKAGAGMKAGAGAGAGAKM-- GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 13 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C013 C027 Reverse Complement Reverse Complement YCCTGGTCTACADAGTGAGTTCCAGVW WHKAGACAGGGTTTCMCTGKY TCTASABAGKGWKTYCCWGKWYCCTGG Direction: Backward Position #: 1 Overlap #: 21 Alignment: YCCTGGTCTACADAGTGAGTTCCAGVW ------WHKAGACAGGGTTTCMCTGKY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C019 Reverse Complement Original Motif CCAGGMWYCWGGKAYWCRCTBTSTAGA MWYCCCAGCACTTGGGAGGCAG MWYCCMRGCACYWGGGABDCRSTBTSTAGA Direction: Forward Position #: 4 Overlap #: 19 Alignment: ---CCAGGMWYCWGGKAYWCRCTBTSTAGA MWYCCCAGCACTTGGGAGGCAG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C132 Combined Motif Reverse Complement Reverse Complement TCTASABASKGHBTCCCWMGTGCMYGGMWR WCCTKGWTCTCWCMCTGW TCTASACMBKGHBYYCHHMSTGHMYGGMWR Direction: Forward Position #: 6 Overlap #: 18 Alignment: TCTASABASKGHBTCCCWMGTGCMYGGMWR -----WCCTKGWTCTCWCMCTGW------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C053 Original Motif Original Motif TCTASACMBKGHBYYCHHMSTGHMYGGMWR RMACRGAGAAAYCCTGKY RMAYVKAGAMMYYBWKBYCHHMSTGHMYGGMWR Direction: Forward Position #: 4 Overlap #: 15 Alignment: ---TCTASACMBKGHBYYCHHMSTGHMYGGMWR RMACRGAGAAAYCCTGKY--------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C036 Combined Motif Original Motif Original Motif RMAYVKAGAMMYYBWKBYCHHMSTGHMYGGMWR MKAGMKMGAGAKMKAGMK MDABMKAGAVAKHKWGHKCHHMSTGHMYGGMWR Direction: Forward Position #: 1 Overlap #: 18 Alignment: RMAYVKAGAMMYYBWKBYCHHMSTGHMYGGMWR MKAGMKMGAGAKMKAGMK--------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 14 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C014 C086 Original Motif Original Motif YSGGAGGCAGAGGCMS CSGGAGKCWGMGGSASG CSGGAGKCAGAGGCMSG Direction: Forward Position #: 1 Overlap #: 16 Alignment: YSGGAGGCAGAGGCMS- CSGGAGKCWGMGGSASG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C050 Original Motif Reverse Complement CSGGAGKCAGAGGCMSG CYKGAGGSMGRGGCVG CBGGAGGCAGAGGCVGG Direction: Forward Position #: 1 Overlap #: 16 Alignment: CSGGAGKCAGAGGCMSG CYKGAGGSMGRGGCVG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C083 Original Motif Reverse Complement CBGGAGGCAGAGGCVGG CYRGAGSMKSAGGBRG CBGGAGGCDGAGGCVGG Direction: Forward Position #: 1 Overlap #: 16 Alignment: CBGGAGGCAGAGGCVGG CYRGAGSMKSAGGBRG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C101 Original Motif Reverse Complement CBGGAGGCDGAGGCVGG MTGGGASVSYSAGGSAK MYBGGAGGSBSAGGCAKG Direction: Forward Position #: 2 Overlap #: 16 Alignment: -CBGGAGGCDGAGGCVGG MTGGGASVSYSAGGSAK- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C012 Combined Motif Original Motif Original Motif MYBGGAGGSBSAGGCAKG MKAGAGMKAGAGAGAGAKM MYBVKAGRSHGAGRSAGRGAKM Direction: Forward Position #: 4 Overlap #: 15 Alignment: MYBGGAGGSBSAGGCAKG---- ---MKAGAGMKAGAGAGAGAKM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 15 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C015 C027 Original Motif Reverse Complement DVAGCCWKGGCTACAVAGCK WHKAGACAGGGTTTCMCTGKY WHBAGMCAGGGYTWCMVWGBB Direction: Forward Position #: 2 Overlap #: 20 Alignment: -DVAGCCWKGGCTACAVAGCK WHKAGACAGGGTTTCMCTGKY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C019 Reverse Complement Reverse Complement VVCWVYGWAKCCCTGRCTBHW CTGCCTCCCAAGTGCTGGGMWR CTVCCTVCSAAGYSCTGGSHHDW Direction: Forward Position #: 3 Overlap #: 20 Alignment: --VVCWVYGWAKCCCTGRCTBHW CTGCCTCCCAAGTGCTGGGMWR- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C009 Original Motif Original Motif CTVCCTVCSAAGYSCTGGSHHDW ABGCCTTTAATCCCAGCACTHR ABGCCTDYMWBCCMAGCVCTBRSHHDW Direction: Forward Position #: 5 Overlap #: 18 Alignment: ----CTVCCTVCSAAGYSCTGGSHHDW ABGCCTTTAATCCCAGCACTHR----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C005 Reverse Complement Original Motif WDHHSMBAGBGCTRGGVWYMDAGGCBT TCTGTAGMCCAGGCTGGCCTYGW TCTGTAGMCMRGGCTGGSCTYVDAGGCBT Direction: Forward Position #: 3 Overlap #: 21 Alignment: --WDHHSMBAGBGCTRGGVWYMDAGGCBT TCTGTAGMCCAGGCTGGCCTYGW------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C007 Reverse Complement Reverse Complement ABGCCTDVKAGSCCAGCCKRGRCTACAGA SAGGCTGYCCTVGAACTCASAAY SAGGMTGCCYTVGARCYCAGMHBRGRCTACAGA Direction: Forward Position #: 5 Overlap #: 19 Alignment: ----ABGCCTDVKAGSCCAGCCKRGRCTACAGA SAGGCTGYCCTVGAACTCASAAY---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 16 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C016 C001 Reverse Complement Reverse Complement WWTTYTWTYTTWDTTTWTTWH WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW WWHTTTTWWWTTTTWTTTTWDTTTTTTWWW Direction: Forward Position #: 9 Overlap #: 21 Alignment: --------WWTTYTWTYTTWDTTTWTTWH- WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C010 Combined Motif Reverse Complement Original Motif WWWAAAAAADWAAAAWAAAAWWWAAAAHWW WWWAAAAWWAAAAAAAAAAWW WWWAAAAWWAAAAAAAAAAAWWWAAAAHWW Direction: Forward Position #: 1 Overlap #: 21 Alignment: WWWAAAAAADWAAAAWAAAAWWWAAAAHWW WWWAAAAWWAAAAAAAAAAWW--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C002 Combined Motif Reverse Complement Reverse Complement WWHTTTTWWWTTTTTTTTTTTWWTTTTWWW MKKTKKGTGTGTGTGTGTKKKTA WWHTTTHTDTKTKTKTKTKTKTKTKTTTAW Direction: Forward Position #: 7 Overlap #: 23 Alignment: WWHTTTTWWWTTTTTTTTTTTWWTTTTWWW ------MKKTKKGTGTGTGTGTGTKKKTA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C030 Combined Motif Reverse Complement Original Motif WTAAARARAYARARAYARARADAHAAAHWW WYAAAAAMAAAAAAAAWAM WTAAARAHAHARAVAMARAAAAWHAAAHWW Direction: Forward Position #: 7 Overlap #: 19 Alignment: WTAAARARAYARARAYARARADAHAAAHWW ------WYAAAAAMAAAAAAAAWAM----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C062 Combined Motif Original Motif Original Motif WTAAARAHAHARAVAMARAAAAWHAAAHWW WWAMAWRMAMAYWAAHWW WWAAAWAHAMAHAAAHWWAAAAWHAAAHWW Direction: Forward Position #: 1 Overlap #: 18 Alignment: WTAAARAHAHARAVAMARAAAAWHAAAHWW WWAMAWRMAMAYWAAHWW------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 17 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C017 C012 Original Motif Original Motif WSWGAGASWSAGAGASWS MKAGAGMKAGAGAGAGAKM HBAGAGAGAGAGAGAGABM Direction: Forward Position #: 1 Overlap #: 18 Alignment: WSWGAGASWSAGAGASWS- MKAGAGMKAGAGAGAGAKM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C006 Combined Motif Original Motif Original Motif HBAGAGAGAGAGAGAGABM SWCACACASWCACACWSW HBASASASASASASASASASW Direction: Forward Position #: 4 Overlap #: 16 Alignment: HBAGAGAGAGAGAGAGABM-- ---SWCACACASWCACACWSW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C036 Combined Motif Reverse Complement Reverse Complement WSTSTSTSTSTSTSTSTSTBH RRCTRRRTCTCRRRCTRY WVDSTRDRTCTSDVDCTVTBH Direction: Forward Position #: 2 Overlap #: 18 Alignment: WSTSTSTSTSTSTSTSTSTBH -RRCTRRRTCTCRRRCTRY-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C132 Combined Motif Reverse Complement Original Motif HBAVAGDVDSAGAMDMASDVW WCAGRGWGAGAWCYAGGW HBAVWSAVRGAGAGDHMBAGDW Direction: Forward Position #: 5 Overlap #: 17 Alignment: HBAVAGDVDSAGAMDMASDVW- ----WCAGRGWGAGAWCYAGGW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C002 Reverse Complement Reverse Complement WHCTBYDDCTCTCKVTSWVTBH MKKTKKGTGTGTGTGTGTKKKTA MBBTKBKTSTSTSTGTGTBTBTA Direction: Forward Position #: 1 Overlap #: 22 Alignment: WHCTBYDDCTCTCKVTSWVTBH- MKKTKKGTGTGTGTGTGTKKKTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 18 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C018 C024 Reverse Complement Reverse Complement THTTTTTTTMYTT THTTDMWTTTTWKMTTDA ATMTTTTTTTMTTDTHTT Direction: Backward Position #: 2 Overlap #: 13 Alignment: ----THTTTTTTTMYTT- THTTDMWTTTTWKMTTDA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C033 Original Motif Reverse Complement ATMTTTTTTTMTTDTHTT WTTTWKYTTTMWTTWW WTHTTTYTTTMTTTHWTT Direction: Forward Position #: 1 Overlap #: 16 Alignment: ATMTTTTTTTMTTDTHTT WTTTWKYTTTMWTTWW-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C010 Original Motif Reverse Complement WTHTTTYTTTMTTTHWTT WWTTTTTTTTTTWWTTTTWWW WWTTTTTTTTTTTATTTTWTT Direction: Forward Position #: 4 Overlap #: 18 Alignment: ---WTHTTTYTTTMTTTHWTT WWTTTTTTTTTTWWTTTTWWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C131 Combined Motif Original Motif Reverse Complement WWTTTTTTTTTTTATTTTWTT WWTTHBKTTDTTWW WWTTWTTTHTTTTHTTWWWTT Direction: Forward Position #: 5 Overlap #: 14 Alignment: WWTTTTTTTTTTTATTTTWTT ----WWTTHBKTTDTTWW--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C030 Combined Motif Reverse Complement Original Motif AAWWWAAHAAAAHAAAWAAWW WYAAAAAMAAAAAAAAWAM AWHAAAAHAAAAAAAAAWAHW Direction: Forward Position #: 2 Overlap #: 19 Alignment: AAWWWAAHAAAAHAAAWAAWW -WYAAAAAMAAAAAAAAWAM- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 19 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C019 C013 Reverse Complement Reverse Complement CTGCCTCCCAAGTGCTGGGMWR YCCTGGTCTACADAGTGAGTTCCAGVW YCCYKGYCTMCMVAGTGMKKKSMAGVW Direction: Forward Position #: 4 Overlap #: 22 Alignment: ---CTGCCTCCCAAGTGCTGGGMWR-- YCCTGGTCTACADAGTGAGTTCCAGVW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C007 Combined Motif Reverse Complement Reverse Complement WVCTRSRRYRCACTVYGYAGKCYMGGM SAGGCTGYCCTVGAACTCASAAY WVCTRSRRYRCACTVYGYAGKCBMGGCTGYCCTVGAACTCASAAY Direction: Forward Position #: 23 Overlap #: 5 Alignment: WVCTRSRRYRCACTVYGYAGKCYMGGM------------------ ----------------------SAGGCTGYCCTVGAACTCASAAY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C003 Reverse Complement Reverse Complement KTTSTGAGTTCVAGGKCAGCCYBGYCTMCMVAGTGMKKKSMAGVW GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC HGKGSCGCAGSSKGGBSKVSVDDGKGMGKKKTTSTGAGTTCVAGGKCAGCC Direction: Backward Position #: 7 Overlap #: 24 Alignment: KTTSTGAGTTCVAGGKCAGCCYBGYCTMCMVAGTGMKKKSMAGVW------ ---------------------GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 20 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C020 C004 Reverse Complement Reverse Complement SGTGGGSGVGGSGGVGSB SSSSSSGSGGSSSSGGSSSSSGSSSSS SSSSSGBGGSSGSGGSGGSGSSSSSSS Direction: Backward Position #: 5 Overlap #: 18 Alignment: -----SGTGGGSGVGGSGGVGSB---- SSSSSSGSGGSSSSGGSSSSSGSSSSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Reverse Complement Original Motif SSSSSSSCSCCSCCSCSSCCVCSSSSS GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC SSSSSGSCBCCSCCBSCCCCVCCCCSSCCCCCSSC Direction: Forward Position #: 6 Overlap #: 22 Alignment: SSSSSSSCSCCSCCSCSSCCVCSSSSS-------- -----GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C037 Combined Motif Original Motif Original Motif SSSSSGSCBCCSCCBSCCCCVCCCCSSCCCCCSSC SVCCGBCMCCSYCMCCVB SSSSSGSSVCCSCCHCCSCCVCCSSSSCCCCCSSC Direction: Forward Position #: 8 Overlap #: 18 Alignment: SSSSSGSCBCCSCCBSCCCCVCCCCSSCCCCCSSC -------SVCCGBCMCCSYCMCCVB---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C128 Combined Motif Original Motif Reverse Complement SSSSSGSSVCCSCCHCCSCCVCCSSSSCCCCCSSC SKTCSMSGACASKSAGMS SBBCSVSGVCMSBCASMSCCVCCSSSSCCCCCSSC Direction: Forward Position #: 1 Overlap #: 18 Alignment: SSSSSGSSVCCSCCHCCSCCVCCSSSSCCCCCSSC SKTCSMSGACASKSAGMS----------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C012 Combined Motif Original Motif Reverse Complement SBBCSVSGVCMSBCASMSCCVCCSSSSCCCCCSSC YRTCTCTCTCTRYCTCTRR SBBCSVBRHCHSBCWSHVYCHCYVVSSCCCCCSSC Direction: Forward Position #: 7 Overlap #: 19 Alignment: SBBCSVSGVCMSBCASMSCCVCCSSSSCCCCCSSC ------YRTCTCTCTCTRYCTCTRR---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 21 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C021 C036 Original Motif Original Motif MKAGMVAGAKAGMK MKAGMKMGAGAKMKAGMK MKAGAGAGAKAGMKMKAG Direction: Backward Position #: 1 Overlap #: 14 Alignment: ----MKAGMVAGAKAGMK MKAGMKMGAGAKMKAGMK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C011 Original Motif Original Motif MKAGAGAGAKAGMKMKAG KMGAGAKMGAGAGAGAKM KMGAGAKAGAGAGAGAKAG Direction: Forward Position #: 2 Overlap #: 17 Alignment: -MKAGAGAGAKAGMKMKAG KMGAGAKMGAGAGAGAKM- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C012 Combined Motif Original Motif Original Motif KMGAGAKAGAGAGAGAKAG MKAGAGMKAGAGAGAGAKM KMGMGAGAGAKAGAGAKAGAKM Direction: Forward Position #: 4 Overlap #: 16 Alignment: KMGAGAKAGAGAGAGAKAG--- ---MKAGAGMKAGAGAGAGAKM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C108 Reverse Complement Reverse Complement YRTCTYTCTCTYTCTCTCYCRR MVSTWTSTCWGTBK MBVTHTSTCTSTYTCTCTCYCRR Direction: Forward Position #: 2 Overlap #: 13 Alignment: -YRTCTYTCTCTYTCTCTCYCRR MVSTWTSTCWGTBK--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C055 Combined Motif Original Motif Reverse Complement MBVTHTSTCTSTYTCTCTCYCRR RYCTCTRRRRCTCTRR MBVTVYCTCTVDVDCTCTVDCRR Direction: Forward Position #: 5 Overlap #: 16 Alignment: MBVTHTSTCTSTYTCTCTCYCRR ----RYCTCTRRRRCTCTRR--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 22 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C022 C140 Original Motif Original Motif BGCCYCBGSCYCCCSVS BSCCBCVSSSBCCYHVG BSCCYCVGSSBCCYVVS Direction: Forward Position #: 1 Overlap #: 17 Alignment: BGCCYCBGSCYCCCSVS BSCCBCVSSSBCCYHVG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Reverse Complement Reverse Complement SVVKGGBSSCVGKGGSB GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC GSVGGGGGSSGGGGGSKGGVMGGSHGKGSC Direction: Forward Position #: 1 Overlap #: 17 Alignment: SVVKGGBSSCVGKGGSB------------- GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C004 Original Motif Reverse Complement GSVGGGGGSSGGGGGSKGGVMGGSHGKGSC SSSSSSGSGGSSSSGGSSSSSGSSSSS SSSSSSSBGGSGSSGGGGGSSGGSVGSSHGKGSC Direction: Forward Position #: 5 Overlap #: 23 Alignment: ----GSVGGGGGSSGGGGGSKGGVMGGSHGKGSC SSSSSSGSGGSSSSGGSSSSSGSSSSS------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C020 Combined Motif Original Motif Reverse Complement SSSSSSSBGGSGSSGGGGGSSGGSVGSSHGKGSC SGTGGGSGVGGSGGVGSB SSSSSSGBGGGSGSGGSGGVGSSSVGSSHGKGSC Direction: Forward Position #: 6 Overlap #: 18 Alignment: SSSSSSSBGGSGSSGGGGGSSGGSVGSSHGKGSC -----SGTGGGSGVGGSGGVGSB----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C037 Reverse Complement Original Motif GSCYCHSSCVSSSCVCCSCCSCSCCCVCSSSSSS SVCCGBCMCCSYCMCCVB SVSCVYCHCCSBCVCCVCCSCCSCSCCCVCSSSSSS Direction: Forward Position #: 3 Overlap #: 16 Alignment: --GSCYCHSSCVSSSCVCCSCCSCSCCCVCSSSSSS SVCCGBCMCCSYCMCCVB------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 23 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C023 C004 Reverse Complement Reverse Complement SSGGSGDBGSGGSS SSSSSSGSGGSSSSGGSSSSSGSSSSS SSSGGSGGSGSGGSSSSSSSSGSGGSS Direction: Backward Position #: 2 Overlap #: 14 Alignment: ------------SSGGSGDBGSGGSS- SSSSSSGSGGSSSSGGSSSSSGSSSSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C104 Reverse Complement Original Motif SSCCSCSSSSSSSSCCSCSCCSCCSSS SSCCYCCCCDCCSS SSCCBCCCCVSCSSCCSCSCCSCCSSS Direction: Forward Position #: 1 Overlap #: 14 Alignment: SSCCSCSSSSSSSSCCSCSCCSCCSSS SSCCYCCCCDCCSS------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C054 Combined Motif Original Motif Original Motif SSCCBCCCCVSCSSCCSCSCCSCCSSS SSCCDCCCCCCCSS SSCCBCSCCVCCCCCCCSSCCSCCSSS Direction: Forward Position #: 6 Overlap #: 14 Alignment: SSCCBCCCCVSCSSCCSCSCCSCCSSS -----SSCCDCCCCCCCSS-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C003 Original Motif Original Motif SSCCBCSCCVCCCCCCCSSCCSCCSSS GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC GSCYCHSSCYBCCCCBCCCCSSCCCCCSSCSSS Direction: Forward Position #: 7 Overlap #: 24 Alignment: ------SSCCBCSCCVCCCCCCCSSCCSCCSSS GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C008 Reverse Complement Reverse Complement SSSGSSGGGGGSSGGGGBGGGGBKGSSHGKGSC SSGGSSGGGGSSGGSS SSGGSSGGGGGSGGGGGBGGGGBKGSSHGKGSC Direction: Forward Position #: 1 Overlap #: 16 Alignment: SSSGSSGGGGGSSGGGGBGGGGBKGSSHGKGSC SSGGSSGGGGSSGGSS----------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 24 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C024 C097 Reverse Complement Reverse Complement THTTDMWTTTTWKMTTDA WVTTSWWTTTTWWSTTBW WHTTBWWTTTTWWVTTDW Direction: Backward Position #: 1 Overlap #: 18 Alignment: THTTDMWTTTTWKMTTDA WVTTSWWTTTTWWSTTBW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C001 Combined Motif Reverse Complement Original Motif WDAAVWWAAAAWWBAAHW WWWAAAAAWWAAAAAWAAAAAWWAAAAHWW WDAAAAWAAAAAAAAAHAAAAWWAAAAHWW Direction: Forward Position #: 1 Overlap #: 18 Alignment: WDAAVWWAAAAWWBAAHW------------ WWWAAAAAWWAAAAAWAAAAAWWAAAAHWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C030 Combined Motif Original Motif Original Motif WDAAAAWAAAAAAAAAHAAAAWWAAAAHWW WYAAAAAMAAAAAAAAWAM WHAAAAAAAAAAAAAAWAAAAWWAAAAHWW Direction: Forward Position #: 1 Overlap #: 19 Alignment: WDAAAAWAAAAAAAAAHAAAAWWAAAAHWW WYAAAAAMAAAAAAAAWAM----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C032 Combined Motif Original Motif Original Motif WHAAAAAAAAAAAAAAWAAAAWWAAAAHWW HWAAWYDAAAMWRWAMWR WWAAWHWAAAAWAWAAWAAAAWWAAAAHWW Direction: Forward Position #: 1 Overlap #: 18 Alignment: WHAAAAAAAAAAAAAAWAAAAWWAAAAHWW HWAAWYDAAAMWRWAMWR------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C010 Combined Motif Reverse Complement Reverse Complement WWHTTTTWWTTTTWTTWTWTTTTWHWTTWW WWTTTTTTTTTTWWTTTTWWW WWTTTTTTTTTTWWTTTTWWTTTWHWTTWW Direction: Forward Position #: 1 Overlap #: 21 Alignment: WWHTTTTWWTTTTWTTWTWTTTTWHWTTWW WWTTTTTTTTTTWWTTTTWWW--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 25 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C025 C078 Original Motif Original Motif KMGAKAGAGMGAKM YRGAYAGAGRGAYR KMGAKAGAGMGAKM Direction: Backward Position #: 1 Overlap #: 14 Alignment: KMGAKAGAGMGAKM YRGAYAGAGRGAYR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C012 Combined Motif Reverse Complement Reverse Complement YRTCYCTCTRTCYR YRTCTCTCTCTRYCTCTRR YRTVTCTCTMTCTRYCTCTRR Direction: Forward Position #: 3 Overlap #: 12 Alignment: YRTCYCTCTRTCYR------- --YRTCTCTCTCTRYCTCTRR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C011 Original Motif Reverse Complement YRTVTCTCTMTCTRYCTCTRR RRTCTCTCTCRRTCTCRR DRTCTCTCTCDVTVTCDVTRR Direction: Forward Position #: 1 Overlap #: 18 Alignment: YRTVTCTCTMTCTRYCTCTRR RRTCTCTCTCRRTCTCRR--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C026 Original Motif Reverse Complement DRTCTCTCTCDVTVTCDVTRR RRTCTCRRRRTCTCRR VRTCTCDVDVTCTCDVDVTRR Direction: Forward Position #: 1 Overlap #: 16 Alignment: DRTCTCTCTCDVTVTCDVTRR RRTCTCRRRRTCTCRR----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C070 Combined Motif Original Motif Original Motif VRTCTCDVDVTCTCDVDVTRR GVGABAGAVAGASVK VRTCKSGVBABMBMGABVKRR Direction: Forward Position #: 5 Overlap #: 15 Alignment: VRTCTCDVDVTCTCDVDVTRR ----GVGABAGAVAGASVK-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 26 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C026 C011 Original Motif Original Motif KMGAGAKMKMGAGAKM KMGAGAKMGAGAGAGAKM KMGAGAKMGAGAGAGAKM Direction: Forward Position #: 1 Overlap #: 16 Alignment: KMGAGAKMKMGAGAKM-- KMGAGAKMGAGAGAGAKM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C012 Combined Motif Original Motif Original Motif KMGAGAKMGAGAGAGAKM MKAGAGMKAGAGAGAGAKM KMGAGAGAGMGAGAGAKAGAKM Direction: Forward Position #: 4 Overlap #: 15 Alignment: KMGAGAKMGAGAGAGAKM---- ---MKAGAGMKAGAGAGAGAKM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C017 Combined Motif Reverse Complement Reverse Complement YRTCTYTCTCTCYCTCTCTCRR SWSTCTCTSWSTCTCWSW YRTCTSTCTCTCTCTCTCTCDR Direction: Forward Position #: 4 Overlap #: 18 Alignment: YRTCTYTCTCTCYCTCTCTCRR ---SWSTCTCTSWSTCTCWSW- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C036 Reverse Complement Original Motif KDGAGAGAGAGAGAGASAGAKM MKAGMKMGAGAKMKAGMK MKDGMKAGAGAKAGAGMKAGAKM Direction: Forward Position #: 2 Overlap #: 17 Alignment: -KDGAGAGAGAGAGAGASAGAKM MKAGMKMGAGAKMKAGMK----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C129 Original Motif Original Motif MKDGMKAGAGAKAGAGMKAGAKM KKGCTAYRYRGAGAMM KKGCTABRBAGAGABMGAGMKAGAKM Direction: Forward Position #: 4 Overlap #: 13 Alignment: ---MKDGMKAGAGAKAGAGMKAGAKM KKGCTAYRYRGAGAMM---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 27 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C027 C005 Original Motif Reverse Complement MRCAGRGAAACCCTGTCTYDW WCKAGGCCAGCCTGGYCTACAGA WCDASRVVRRMMYSSTSTMYHDA Direction: Forward Position #: 3 Overlap #: 21 Alignment: --MRCAGRGAAACCCTGTCTYDW WCKAGGCCAGCCTGGYCTACAGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C013 Combined Motif Original Motif Original Motif WCDASRVVRRMMYSSTSTMYHDA WVCTGGAACTCACTHTGTAGACCAGGM WCDVCDGGAACHCVCTSTSTAGACCAGGM Direction: Forward Position #: 3 Overlap #: 21 Alignment: WCDASRVVRRMMYSSTSTMYHDA------ --WVCTGGAACTCACTHTGTAGACCAGGM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C002 Reverse Complement Reverse Complement YCCTGGTCTASASAGBGHGTTCCDGBDGW MKKTKKGTGTGTGTGTGTKKKTA KKTAHBKWBDGWGTGTGTKYSDGYCCTGGTCTA Direction: Backward Position #: 5 Overlap #: 19 Alignment: YCCTGGTCTASASAGBGHGTTCCDGBDGW---- ----------MKKTKKGTGTGTGTGTGTKKKTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 28 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C028 C012 Original Motif Original Motif BVGASSCASAGVSABV MKAGAGMKAGAGAGAGAKM KMBVGAGVBAGAGMSAGVM Direction: Backward Position #: 3 Overlap #: 16 Alignment: -BVGASSCASAGVSABV-- MKAGAGMKAGAGAGAGAKM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C041 Original Motif Original Motif KMBVGAGVBAGAGMSAGVM CSGAGGCMKAGGCASS BVGAGRSMKAGRSMSRGVM Direction: Forward Position #: 1 Overlap #: 16 Alignment: KMBVGAGVBAGAGMSAGVM CSGAGGCMKAGGCASS--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C044 Combined Motif Reverse Complement Reverse Complement RBCKSYSMCTYRSMCTCVB BATCSVMCTGCCTCTVB RBCBVTCVSHCDSCCTCDVB Direction: Forward Position #: 4 Overlap #: 16 Alignment: RBCKSYSMCTYRSMCTCVB- ---BATCSVMCTGCCTCTVB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C011 Reverse Complement Original Motif BVDGAGGSDGHSVGABVGVM KMGAGAKMGAGAGAGAKM KVGAGAGVSAGAGAGAKMGVM Direction: Forward Position #: 2 Overlap #: 17 Alignment: -BVDGAGGSDGHSVGABVGVM KMGAGAKMGAGAGAGAKM--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C085 Reverse Complement Reverse Complement RBCYRTCTCTCTSBCTCTCVR SKCSVHMTCTDBSKCSV VKCBVTCTCTVTSKCBSTCVR Direction: Forward Position #: 1 Overlap #: 17 Alignment: RBCYRTCTCTCTSBCTCTCVR SKCSVHMTCTDBSKCSV---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 29 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C029 C032 Reverse Complement Reverse Complement TTWWWTTTTWWWTT KWYTWKWYTTTDMWTTWH WHTTWDWTTTTWHWTTKW Direction: Backward Position #: 3 Overlap #: 14 Alignment: --TTWWWTTTTWWWTT-- KWYTWKWYTTTDMWTTWH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C097 Combined Motif Original Motif Reverse Complement WHTTWDWTTTTWHWTTKW WVTTSWWTTTTWWSTTBW WHTTDWWTTTTWWDTTDW Direction: Forward Position #: 1 Overlap #: 18 Alignment: WHTTWDWTTTTWHWTTKW WVTTSWWTTTTWWSTTBW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C063 Reverse Complement Original Motif WHAADWWAAAAWWDAAHW MAAKMWAAAAWKHAA WHAAHWWAAAAWHDAAHW Direction: Forward Position #: 1 Overlap #: 15 Alignment: WHAADWWAAAAWWDAAHW MAAKMWAAAAWKHAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C079 Combined Motif Original Motif Original Motif WHAAHWWAAAAWHDAAHW ADAAAKWAAAAWAKARW WDAAHWWAAAAWADAAHW Direction: Forward Position #: 1 Overlap #: 17 Alignment: WHAAHWWAAAAWHDAAHW ADAAAKWAAAAWAKARW- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C001 Combined Motif Original Motif Original Motif WDAAHWWAAAAWADAAHW WWWAAAAAWWAAAAAWAAAAAWWAAAAHWW WDAWWWAAAAAWWDAAAAWAAAAAWWAAAAHWW Direction: Forward Position #: 4 Overlap #: 15 Alignment: WDAAHWWAAAAWADAAHW--------------- ---WWWAAAAAWWAAAAAWAAAAAWWAAAAHWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 30 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C030 C001 Original Motif Original Motif WYAAAAAMAAAAAAAAWAM WWWAAAAAWWAAAAAWAAAAAWWAAAAHWW WWWAAAAAWWWAAAAAAAAAAAAAAWAHWW Direction: Forward Position #: 10 Overlap #: 19 Alignment: ---------WYAAAAAMAAAAAAAAWAM-- WWWAAAAAWWAAAAAWAAAAAWWAAAAHWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C010 Combined Motif Reverse Complement Reverse Complement WWHTWTTTTTTTTTTTTTTWWWTTTTTWWW WWTTTTTTTTTTWWTTTTWWW WWTTTTTTTTTTTWTTTTTWWWTTTTTWWW Direction: Forward Position #: 1 Overlap #: 21 Alignment: WWHTWTTTTTTTTTTTTTTWWWTTTTTWWW WWTTTTTTTTTTWWTTTTWWW--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C016 Combined Motif Original Motif Reverse Complement WWTTTTTTTTTTTWTTTTTWWWTTTTTWWW WWTTYTWTYTTWDTTTWTTWH WWTTYTTTYTTTDTTTTTTWWWTTTTTWWW Direction: Forward Position #: 1 Overlap #: 21 Alignment: WWTTTTTTTTTTTWTTTTTWWWTTTTTWWW WWTTYTWTYTTWDTTTWTTWH--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C012 Reverse Complement Original Motif WWWAAAAAWWWAAAAAADAAAMAAAMAAWW MKAGAGMKAGAGAGAGAKM HDARARADADARADARADAAAMAAAMAAWW Direction: Forward Position #: 1 Overlap #: 19 Alignment: WWWAAAAAWWWAAAAAADAAAMAAAMAAWW MKAGAGMKAGAGAGAGAKM----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C002 Combined Motif Reverse Complement Reverse Complement WWTTYTTTYTTTDTMTDTMTHTDTMTKTDH MKKTKKGTGTGTGTGTGTKKKTA MKKTBTKTKTKTGTVTKTBTBTDTMTKTDH Direction: Forward Position #: 1 Overlap #: 23 Alignment: WWTTYTTTYTTTDTMTDTMTHTDTMTKTDH MKKTKKGTGTGTGTGTGTKKKTA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 31 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C031 C139 Original Motif Original Motif WHAAAMRWWYAAAMAWW WWMAAABWWWVAAAAWW WWAAAAVWWWVAAAAWW Direction: Backward Position #: 1 Overlap #: 17 Alignment: WHAAAMRWWYAAAMAWW WWMAAABWWWVAAAAWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C001 Combined Motif Reverse Complement Reverse Complement WWTTTTBWWWBTTTTWW WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW WWTTTTTWTTDTTTTTTWTTTTTWWTTTTTWWW Direction: Forward Position #: 4 Overlap #: 14 Alignment: WWTTTTBWWWBTTTTWW---------------- ---WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C069 Combined Motif Reverse Complement Original Motif WWWAAAAAWWAAAAAWAAAAAADAAWAAAAAWW AHAAMAAYWDYAAMAAHD WWAAAAAWWWWAAAAAWAAAAADAAWAAAAAWW Direction: Forward Position #: 1 Overlap #: 18 Alignment: WWWAAAAAWWAAAAAWAAAAAADAAWAAAAAWW AHAAMAAYWDYAAMAAHD--------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C010 Combined Motif Original Motif Original Motif WWAAAAAWWWWAAAAAWAAAAADAAWAAAAAWW WWWAAAAWWAAAAAAAAAAWW WWAAAAAWWWAAAAAWAAAAAAAAAAAWAAAWW Direction: Forward Position #: 8 Overlap #: 21 Alignment: WWAAAAAWWWWAAAAAWAAAAADAAWAAAAAWW -------WWWAAAAWWAAAAAAAAAAWW----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C016 Combined Motif Original Motif Original Motif WWAAAAAWWWAAAAAWAAAAAAAAAAAWAAAWW HWAAWAAAHWAAMAWAMAAWW HWAAAAAAHWAAAAWAAAAAAAAAAAAWAAAWW Direction: Forward Position #: 1 Overlap #: 21 Alignment: WWAAAAAWWWAAAAAWAAAAAAAAAAAWAAAWW HWAAWAAAHWAAMAWAMAAWW------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 32 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C032 C001 Reverse Complement Reverse Complement KWYTWKWYTTTDMWTTWH WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW WWHTTTTWWWTTTTWTTTTWWWTTTWTWWW Direction: Forward Position #: 9 Overlap #: 18 Alignment: --------KWYTWKWYTTTDMWTTWH---- WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C024 Reverse Complement Original Motif WWWAWAAAWWWAAAAWAAAAWWWAAAAHWW TDAAYRWAAAAWYDAAHA TWAAHAWAAAWWWAAAWAAAAWWWAAAAHWW Direction: Forward Position #: 2 Overlap #: 17 Alignment: -WWWAWAAAWWWAAAAWAAAAWWWAAAAHWW TDAAYRWAAAAWYDAAHA------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C016 Combined Motif Original Motif Original Motif TWAAHAWAAAWWWAAAWAAAAWWWAAAAHWW HWAAWAAAHWAAMAWAMAAWW HWAAHAAAMWAAMAAAHAAAAWWWAAAAHWW Direction: Forward Position #: 1 Overlap #: 21 Alignment: TWAAHAWAAAWWWAAAWAAAAWWWAAAAHWW HWAAWAAAHWAAMAWAMAAWW---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C010 Combined Motif Original Motif Original Motif HWAAHAAAMWAAMAAAHAAAAWWWAAAAHWW WWWAAAAWWAAAAAAAAAAWW WWAAAAAWWAAAAAAAHAAAWWWWAAAAHWW Direction: Forward Position #: 1 Overlap #: 21 Alignment: HWAAHAAAMWAAMAAAHAAAAWWWAAAAHWW WWWAAAAWWAAAAAAAAAAWW---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C030 Combined Motif Original Motif Original Motif WWAAAAAWWAAAAAAAHAAAWWWWAAAAHWW WYAAAAAMAAAAAAAAWAM WWAAAAAAAAAAAAAAWAAAWWWWAAAAHWW Direction: Forward Position #: 1 Overlap #: 19 Alignment: WWAAAAAWWAAAAAAAHAAAWWWWAAAAHWW WYAAAAAMAAAAAAAAWAM------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 33 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C033 C016 Original Motif Original Motif WWAAWYAAAMRWAAAW HWAAWAAAHWAAMAWAMAAWW WWAWAAWYAAAMAWAMAAHWA Direction: Backward Position #: 3 Overlap #: 16 Alignment: ---WWAAWYAAAMRWAAAW-- HWAAWAAAHWAAMAWAMAAWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C010 Combined Motif Original Motif Original Motif WWAWAAWYAAAMAWAMAAHWA WWWAAAAWWAAAAAAAAAAWW WWWAAAAHWAAAAAAAAAWWA Direction: Forward Position #: 1 Overlap #: 21 Alignment: WWAWAAWYAAAMAWAMAAHWA WWWAAAAWWAAAAAAAAAAWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C098 Combined Motif Original Motif Original Motif WWWAAAAHWAAAAAAAAAWWA AAAAWWAMAAWWAAWH WWWAAAAWWAAMAAAAAAWWA Direction: Forward Position #: 5 Overlap #: 16 Alignment: WWWAAAAHWAAAAAAAAAWWA ----AAAAWWAMAAWWAAWH- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C030 Original Motif Original Motif WWWAAAAWWAAMAAAAAAWWA WYAAAAAMAAAAAAAAWAM WYAAWAAAAAAWAAAAWAAAAWWA Direction: Forward Position #: 4 Overlap #: 16 Alignment: ---WWWAAAAWWAAMAAAAAAWWA WYAAAAAMAAAAAAAAWAM----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C001 Combined Motif Reverse Complement Reverse Complement TWWTTTTWTTTTWTTTTTTWTTMW WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW TWWTTHWHTTTTWWTTTTTWTTTTTWWTTTTTWWW Direction: Forward Position #: 6 Overlap #: 19 Alignment: TWWTTTTWTTTTWTTTTTTWTTMW----------- -----WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 34 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C034 C004 Original Motif Reverse Complement SCACTGSGGAGSMAGAGS SSSSSSGSGGSSSSGGSSSSSGSSSSS SSSVSBSSGGRGSSRGVGSSSSSSSGS Direction: Backward Position #: 2 Overlap #: 18 Alignment: --------SCACTGSGGAGSMAGAGS- SSSSSSGSGGSSSSGGSSSSSGSSSSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Original Motif Reverse Complement SSSVSBSSGGRGSSRGVGSSSSSSSGS GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC SSSVSGSSGGGGGSVGGGGSSGGGSVGGSHGKGSC Direction: Forward Position #: 6 Overlap #: 22 Alignment: SSSVSBSSGGRGSSRGVGSSSSSSSGS-------- -----GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C013 Combined Motif Reverse Complement Original Motif GSCYCHSCCVSCCCSSCCCCVSCCCCCSSCSBSSS WVCTGGAACTCACTHTGTAGACCAGGM GSCYCHSCCVSCCCSSCCCCVSCCCCCSSCSDSCBGGAACTCACTHTGTAGACCAGGM Direction: Forward Position #: 32 Overlap #: 4 Alignment: GSCYCHSCCVSCCCSSCCCCVSCCCCCSSCSBSSS----------------------- -------------------------------WVCTGGAACTCACTHTGTAGACCAGGM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C011 Reverse Complement Original Motif YCCTGGTCTACADAGTGAGTTCCVGSDSGSSGGGGGSVGGGGSSGGGSVGGSHGKGSC KMGAGAKMGAGAGAGAKM BCSWGRTCKASAGAGWGAGTTCCVGSDSGSSGGGGGSVGGGGSSGGGSVGGSHGKGSC Direction: Forward Position #: 1 Overlap #: 18 Alignment: YCCTGGTCTACADAGTGAGTTCCVGSDSGSSGGGGGSVGGGGSSGGGSVGGSHGKGSC KMGAGAKMGAGAGAGAKM---------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C012 Combined Motif Original Motif Original Motif BCSWGRTCKASAGAGWGAGTTCCVGSDSGSSGGGGGSVGGGGSSGGGSVGGSHGKGSC MKAGAGMKAGAGAGAGAKM BMBAGRKMKASAGAGAGAGHTCCVGSDSGSSGGGGGSVGGGGSSGGGSVGGSHGKGSC Direction: Forward Position #: 2 Overlap #: 19 Alignment: BCSWGRTCKASAGAGWGAGTTCCVGSDSGSSGGGGGSVGGGGSSGGGSVGGSHGKGSC -MKAGAGMKAGAGAGAGAKM-------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 35 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C035 C073 Reverse Complement Original Motif WWTTTMYAGACRKGGTWW YMWGSMYAGCCRKSKCTR HMTKKMYAGMCRKGGYTD Direction: Forward Position #: 1 Overlap #: 18 Alignment: WWTTTMYAGACRKGGTWW YMWGSMYAGCCRKSKCTR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C015 Reverse Complement Original Motif DAKCCYKGYCTMRRYAYH DVAGCCWKGGCTACAVAGCK DHAGCCHKGBCTASABABHK Direction: Forward Position #: 2 Overlap #: 18 Alignment: -DAKCCYKGYCTMRRYAYH- DVAGCCWKGGCTACAVAGCK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C062 Reverse Complement Reverse Complement RDBTBTSTAGVCYDGGCTHD WWDTTWMTRTRKWTYTWW WWRTYWVTRTAGDYYTDKCTHD Direction: Forward Position #: 3 Overlap #: 16 Alignment: --RDBTBTSTAGVCYDGGCTHD WWDTTWMTRTRKWTYTWW---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C099 Reverse Complement Original Motif DHAGYHAMMDCTAMAVWMAKWW MYCCCMGCACTCKGGARK MYCMSHVMACTCKRSARDMAKWW Direction: Forward Position #: 2 Overlap #: 17 Alignment: -DHAGYHAMMDCTAMAVWMAKWW MYCCCMGCACTCKGGARK----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C012 Reverse Complement Reverse Complement WWRTYDKTSKRGAGTRVDSRGMR YRTCTCTCTCTRYCTCTRR YDTVTYDBTCTRKMKYDVRSRGMR Direction: Forward Position #: 2 Overlap #: 18 Alignment: -WWRTYDKTSKRGAGTRVDSRGMR YRTCTCTCTCTRYCTCTRR----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 36 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C036 C012 Original Motif Original Motif MKAGMKMGAGAKMKAGMK MKAGAGMKAGAGAGAGAKM MMKAGAGMGAGAGMKAGMK Direction: Backward Position #: 2 Overlap #: 18 Alignment: MKAGMKMGAGAKMKAGMK- MKAGAGMKAGAGAGAGAKM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C132 Combined Motif Original Motif Original Motif MMKAGAGMGAGAGMKAGMK WCAGRGWGAGAWCYAGGW MMKASAGVGAGAGADMBAGGW Direction: Forward Position #: 4 Overlap #: 16 Alignment: MMKAGAGMGAGAGMKAGMK-- ---WCAGRGWGAGAWCYAGGW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C017 Combined Motif Reverse Complement Reverse Complement WCCTBYDTCTCTCBCTSTRRY SWSTCTCTSWSTCTCWSW VHCTCTVTCTCTCTCTSWRRY Direction: Forward Position #: 1 Overlap #: 18 Alignment: WCCTBYDTCTCTCBCTSTRRY SWSTCTCTSWSTCTCWSW--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C013 Original Motif Original Motif VHCTCTVTCTCTCTCTSWRRY WVCTGGAACTCACTHTGTAGACCAGGM DHCTSKAWCTCWCTCTGTAGHCCAGGM Direction: Forward Position #: 1 Overlap #: 21 Alignment: VHCTCTVTCTCTCTCTSWRRY------ WVCTGGAACTCACTHTGTAGACCAGGM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C093 Combined Motif Original Motif Original Motif DHCTSKAWCTCWCTCTGTAGHCCAGGM AKCCASMBSCCKSTGCMT DHMTSBAVCTSHCKCTGYAKHCCAGGM Direction: Forward Position #: 3 Overlap #: 18 Alignment: DHCTSKAWCTCWCTCTGTAGHCCAGGM --AKCCASMBSCCKSTGCMT------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 37 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C037 C003 Original Motif Original Motif SVCCGBCMCCSYCMCCVB GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC SCBBCCVBCCCCSSCCCCVSGSCYCHSCCY Direction: Backward Position #: 3 Overlap #: 18 Alignment: ----------SVCCGBCMCCSYCMCCVB-- GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C004 Original Motif Original Motif SCBBCCVBCCCCSSCCCCVSGSCYCHSCCY SSSSSCSSSSSCCSSSSCCSCSSSSSS SSSSSCSSCCSCCSCCSCCVCCSSSSCYCHSCCY Direction: Forward Position #: 5 Overlap #: 23 Alignment: ----SCBBCCVBCCCCSSCCCCVSGSCYCHSCCY SSSSSCSSSSSCCSSSSCCSCSSSSSS------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C020 Combined Motif Original Motif Original Motif SSSSSCSSCCSCCSCCSCCVCCSSSSCYCHSCCY BSCVCCSCCVCSCCCACS SSCSCCSCCCCSCCCVSCCVCCSSSSCYCHSCCY Direction: Forward Position #: 1 Overlap #: 18 Alignment: SSSSSCSSCCSCCSCCSCCVCCSSSSCYCHSCCY BSCVCCSCCVCSCCCACS---------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C093 Combined Motif Reverse Complement Reverse Complement MGGSHGKGSSSSGGVGGSVGGGSGGGGSGGSGSS ARGCASYGGSVYSTGGYT MGGSHGKRVGSVGBGGSVBGKGGBKGGSGGSGSS Direction: Forward Position #: 8 Overlap #: 18 Alignment: MGGSHGKGSSSSGGVGGSVGGGSGGGGSGGSGSS -------ARGCASYGGSVYSTGGYT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C005 Combined Motif Original Motif Reverse Complement MGGSHGKRVGSVGBGGSVBGKGGBKGGSGGSGSS WCKAGGCCAGCCTGGYCTACAGA MGGSHGKRVGSVGBGGSVBGKGGBDSGVGGCSVGCCTGGYCTACAGA Direction: Forward Position #: 25 Overlap #: 10 Alignment: MGGSHGKRVGSVGBGGSVBGKGGBKGGSGGSGSS------------- ------------------------WCKAGGCCAGCCTGGYCTACAGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 38 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C038 C012 Reverse Complement Original Motif AKAGGCAGSDGGATKKK MKAGAGMKAGAGAGAGAKM KMAKAGRSAGVGRGAKDKD Direction: Backward Position #: 3 Overlap #: 17 Alignment: AKAGGCAGSDGGATKKK-- MKAGAGMKAGAGAGAGAKM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C027 Reverse Complement Original Motif DYDRTCMCBCTSMCTYTYR MRCAGRGAAACCCTGTCTYDW MRCABDGWMACCCTGHCTYDHR Direction: Forward Position #: 4 Overlap #: 18 Alignment: ---DYDRTCMCBCTSMCTYTYR MRCAGRGAAACCCTGTCTYDW- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Original Motif Original Motif MRCABDGWMACCCTGHCTYDHR GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC MRCAGVVHCHCCCTGYCYYBYVCCSSCCCCCSSC Direction: Forward Position #: 5 Overlap #: 18 Alignment: MRCABDGWMACCCTGHCTYDHR------------ ----GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C005 Original Motif Original Motif MRCAGVVHCHCCCTGYCYYBYVCCSSCCCCCSSC TCTGTAGMCCAGGCTGGCCTYGW THDSWRGVCCASSCTGBCYYBBHCCSSCCCCCSSC Direction: Forward Position #: 2 Overlap #: 22 Alignment: -MRCAGVVHCHCCCTGYCYYBYVCCSSCCCCCSSC TCTGTAGMCCAGGCTGGCCTYGW------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C022 Combined Motif Reverse Complement Reverse Complement GSSGGGGGSSGGHBBMKGBCAGSSTGGVCKWSDDA SVSGGGKGSCBGMGGCV GSSGGGGGSSGGHBKMVGBCAGSSTGGVCKWSDDA Direction: Forward Position #: 1 Overlap #: 17 Alignment: GSSGGGGGSSGGHBBMKGBCAGSSTGGVCKWSDDA SVSGGGKGSCBGMGGCV------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 39 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C039 C124 Original Motif Reverse Complement SMAGRSCAGSSYGGBS WSGASKSCAGCSMSGTSW WSVAGKSCAGCSMGGBSW Direction: Forward Position #: 2 Overlap #: 16 Alignment: -SMAGRSCAGSSYGGBS- WSGASKSCAGCSMSGTSW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C126 Reverse Complement Reverse Complement WSVCCRSGCTGSYCTVSW SMCCAGSYYSGMCWBS DVMCMGSBCKGSCHTSSW Direction: Forward Position #: 1 Overlap #: 16 Alignment: WSVCCRSGCTGSYCTVSW SMCCAGSYYSGMCWBS-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C005 Combined Motif Reverse Complement Original Motif WSSADGSCRGBSCYGRVD TCTGTAGMCCAGGCTGGCCTYGW WSSHBKGYAGVCCHGGCTGGCCTYGW Direction: Forward Position #: 4 Overlap #: 15 Alignment: WSSADGSCRGBSCYGRVD-------- ---TCTGTAGMCCAGGCTGGCCTYGW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C073 Original Motif Reverse Complement WSSHBKGYAGVCCHGGCTGGCCTYGW KAGYSYKGGCTKRSCWYK KADBSHBGGCWGVSCWBGCTGGCCTYGW Direction: Forward Position #: 3 Overlap #: 16 Alignment: --WSSHBKGYAGVCCHGGCTGGCCTYGW KAGYSYKGGCTKRSCWYK---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C008 Combined Motif Reverse Complement Reverse Complement WCKAGGCCAGCBWGSVCWGCCVDSBHTR SSGGSSGGGGSSGGSS WCKAGGCCRGSBDGGVCDGSCVDSBHTR Direction: Forward Position #: 7 Overlap #: 16 Alignment: WCKAGGCCAGCBWGSVCWGCCVDSBHTR ------SSGGSSGGGGSSGGSS------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 40 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C040 C007 Original Motif Original Motif RSTGASYTCMARSYCAGY KTTSTGAGTTCVAGGMCAGCCTS KTDSTGAGTTCMAGGHCAGCCTS Direction: Forward Position #: 3 Overlap #: 18 Alignment: --RSTGASYTCMARSYCAGY--- KTTSTGAGTTCVAGGMCAGCCTS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C095 Combined Motif Reverse Complement Original Motif SAGGCTGDCCTYGAACTCASDAY KCCAKMSTGGTSKMCAGM SAGKCYRKCCTGGWVBHCAGHAY Direction: Forward Position #: 4 Overlap #: 18 Alignment: SAGGCTGDCCTYGAACTCASDAY ---KCCAKMSTGGTSKMCAGM-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C020 Original Motif Reverse Complement SAGKCYRKCCTGGWVBHCAGHAY SGTGGGSGVGGSGGVGSB SSHGGSBGDSGBGGHGSBCAGHAY Direction: Forward Position #: 2 Overlap #: 17 Alignment: -SAGKCYRKCCTGGWVBHCAGHAY SGTGGGSGVGGSGGVGSB------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C037 Combined Motif Original Motif Reverse Complement SSHGGSBGDSGBGGHGSBCAGHAY BVGGYGKSGGYGBCGGVS SSDGBGBVGGBGGSVGVBCAGHAY Direction: Forward Position #: 1 Overlap #: 18 Alignment: SSHGGSBGDSGBGGHGSBCAGHAY BVGGYGKSGGYGBCGGVS------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Reverse Complement Original Motif KTHCTGBVCVSCCBCCVBCBCHSS GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC GBHYYGBBCHVCCBCCCCCCCVCCCCCSSC Direction: Forward Position #: 1 Overlap #: 24 Alignment: KTHCTGBVCVSCCBCCVBCBCHSS------ GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 41 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C041 C086 Original Motif Original Motif CSGAGGCMKAGGCASS CSGGAGKCWGMGGSASG SGGAGGCHGAGGCASGC Direction: Backward Position #: 1 Overlap #: 16 Alignment: -CSGAGGCMKAGGCASS CSGGAGKCWGMGGSASG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C028 Combined Motif Reverse Complement Reverse Complement GCSTGCCTCHGCCTCCS VBTSVCTSTGSSTCVB GVSTGCCTCTGBCTCSS Direction: Forward Position #: 2 Overlap #: 16 Alignment: GCSTGCCTCHGCCTCCS -VBTSVCTSTGSSTCVB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C085 Combined Motif Reverse Complement Reverse Complement SSGAGBCAGAGGCASVC SKCSVHMTCTDBSKCSV SSGMGVCMKMKVCVBCCV Direction: Forward Position #: 2 Overlap #: 16 Alignment: SSGAGBCAGAGGCASVC- -SKCSVHMTCTDBSKCSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C004 Combined Motif Reverse Complement Reverse Complement VGGBBGVYYRYGVCRCSS SSSSSSGSGGSSSSGGSSSSSGSSSSS VGGSSSSSBGBGSSGSSGGSSSSSGSSSSS Direction: Forward Position #: 4 Overlap #: 15 Alignment: VGGBBGVYYRYGVCRCSS------------ ---SSSSSSGSGGSSSSGGSSSSSGSSSSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Original Motif Reverse Complement VGGSSSSSBGBGSSGSSGGSSSSSGSSSSS GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC VGGSGSSSGGGGSSGGGGGSGGGSVGGSVGKGSC Direction: Forward Position #: 5 Overlap #: 26 Alignment: VGGSSSSSBGBGSSGSSGGSSSSSGSSSSS---- ----GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 42 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C042 C007 Reverse Complement Original Motif WGAGTRMGTTCKRGGACW KTTSTGAGTTCVAGGMCAGCCTS DRRKTVMRKKCBAGSMHDKTTST Direction: Backward Position #: 1 Overlap #: 18 Alignment: -----WGAGTRMGTTCKRGGACW KTTSTGAGTTCVAGGMCAGCCTS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C124 Reverse Complement Reverse Complement ASAAYHDRSCTBGYYMRVAYMKH WSGASKSCAGCSMSGTSW WSGASDVCAGVSCBGDYHMRVAYMKH Direction: Forward Position #: 4 Overlap #: 15 Alignment: ---ASAAYHDRSCTBGYYMRVAYMKH WSGASKSCAGCSMSGTSW-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C053 Original Motif Reverse Complement WSGASDVCAGVSCBGDYHMRVAYMKH MRCAGGMTTTCTCKGTYK HVSAGGMYWKCBCKGTYBMRVAYMKH Direction: Forward Position #: 1 Overlap #: 18 Alignment: WSGASDVCAGVSCBGDYHMRVAYMKH MRCAGGMTTTCTCKGTYK-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C019 Combined Motif Reverse Complement Original Motif DRRKTVMRVMACRGVGRWMYCCTSVH MWYCCCAGCACTTGGGAGGCAG DVDKYCCAGCACDKRGRARBCVKSVH Direction: Forward Position #: 2 Overlap #: 22 Alignment: DRRKTVMRVMACRGVGRWMYCCTSVH -MWYCCCAGCACTTGGGAGGCAG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C002 Reverse Complement Reverse Complement HVSYBGBMTMCMYDGTGCTGGKRDBH MKKTKKGTGTGTGTGTGTKKKTA MDKTBKBHKYSHBTGTGBKKGKADBH Direction: Forward Position #: 1 Overlap #: 23 Alignment: HVSYBGBMTMCMYDGTGCTGGKRDBH MKKTKKGTGTGTGTGTGTKKKTA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 43 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C043 C152 Reverse Complement Reverse Complement WATTMTTTTTTWTTWW YWTKYWTKTKWYKKWR HWTKYWTTTTWYTTWD Direction: Forward Position #: 1 Overlap #: 16 Alignment: WATTMTTTTTTWTTWW YWTKYWTKTKWYKKWR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C001 Original Motif Reverse Complement HWTKYWTTTTWYTTWD WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW WWHTTTTWTTTTTTTTTTTTWWTTTTTWWW Direction: Forward Position #: 7 Overlap #: 16 Alignment: ------HWTKYWTTTTWYTTWD-------- WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C098 Combined Motif Original Motif Reverse Complement WWHTTTTWTTTTTTTTTTTTWWTTTTTWWW HWTTWWTTYTWWTTTT WWHTTTHWTTTWTTTTTWTTWWTTTTTWWW Direction: Forward Position #: 7 Overlap #: 16 Alignment: WWHTTTTWTTTTTTTTTTTTWWTTTTTWWW ------HWTTWWTTYTWWTTTT-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C057 Combined Motif Original Motif Reverse Complement WWHTTTHWTTTWTTTTTWTTWWTTTTTWWW HWTRTTMKTYTTMKTYKW HWTDTTHWTTTTHTTTTWTTWWTTTTTWWW Direction: Forward Position #: 1 Overlap #: 18 Alignment: WWHTTTHWTTTWTTTTTWTTWWTTTTTWWW HWTRTTMKTYTTMKTYKW------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C016 Combined Motif Reverse Complement Original Motif WWWAAAAAWWAAWAAAAHAAAAWHAADAWH HWAAWAAAHWAAMAWAMAAWW WWAAAAAAHWAAMAAAAAAAWAWHAADAWH Direction: Forward Position #: 1 Overlap #: 21 Alignment: WWWAAAAAWWAAWAAAAHAAAAWHAADAWH HWAAWAAAHWAAMAWAMAAWW--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 44 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C044 C012 Reverse Complement Reverse Complement BATCSVMCTGCCTCTVB YRTCTCTCTCTRYCTCTRR YMTCBSHCTRYCTCTRVYR Direction: Backward Position #: 1 Overlap #: 17 Alignment: --BATCSVMCTGCCTCTVB YRTCTCTCTCTRYCTCTRR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C011 Combined Motif Reverse Complement Original Motif KMVMAGAGKMAGHSBGARM KMGAGAKMGAGAGAGAKM KMVBAGAGRBAGAGVGAGAKM Direction: Forward Position #: 4 Overlap #: 16 Alignment: KMVMAGAGKMAGHSBGARM-- ---KMGAGAKMGAGAGAGAKM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Reverse Complement Original Motif RRTCTCBCTCTBKCTCTBVYR GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC RRTCKCHCYCYBBYKCYBBYVCCCSSCCCCCSSC Direction: Forward Position #: 5 Overlap #: 17 Alignment: RRTCTCBCTCTBKCTCTBVYR------------- ----GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C132 Combined Motif Original Motif Reverse Complement RRTCKCHCYCYBBYKCYBBYVCCCSSCCCCCSSC WCCTKGWTCTCWCMCTGW RRTCKCHHCCTBBHKCTCHCVCYSDSCCCCCSSC Direction: Forward Position #: 8 Overlap #: 18 Alignment: RRTCKCHCYCYBBYKCYBBYVCCCSSCCCCCSSC -------WCCTKGWTCTCWCMCTGW--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C017 Combined Motif Reverse Complement Original Motif GSSGGGGGSHSMGVGHGAGRDBBAGGDDGYGAKM WSWGAGASWSAGAGASWS GSSGGGGDSHSAGRGWGAGAGVSAGGDDGYGAKM Direction: Forward Position #: 8 Overlap #: 18 Alignment: GSSGGGGGSHSMGVGHGAGRDBBAGGDDGYGAKM -------WSWGAGASWSAGAGASWS--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 45 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C045 C015 Original Motif Original Motif RYAGMCMKGKCTRY DVAGCCWKGGCTACAVAGCK AVAGCKDHAGCCHKGKCTAC Direction: Backward Position #: 7 Overlap #: 14 Alignment: RYAGMCMKGKCTRY------ DVAGCCWKGGCTACAVAGCK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C036 Combined Motif Original Motif Original Motif AVAGCKDHAGCCHKGKCTAC MKAGMKMGAGAKMKAGMK AVAGMKRBAGMSAGRKCTASMK Direction: Forward Position #: 5 Overlap #: 16 Alignment: AVAGCKDHAGCCHKGKCTAC-- ----MKAGMKMGAGAKMKAGMK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C126 Reverse Complement Reverse Complement RRSTAGYMCTSRCTBKRRCTVT SMCCAGSYYSGMCWBS RRCYAGBYYBGVCTBBRRCTVT Direction: Forward Position #: 1 Overlap #: 16 Alignment: RRSTAGYMCTSRCTBKRRCTVT SMCCAGSYYSGMCWBS------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C114 Reverse Complement Reverse Complement AVAGMKVBAGVCBKKBCTMGKM SMAGACRRGGMTKS VVAGMBRDRGMBKBKBCTMGKM Direction: Forward Position #: 1 Overlap #: 14 Alignment: AVAGMKVBAGVCBKKBCTMGKM SMAGACRRGGMTKS-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C005 Original Motif Original Motif VVAGMBRDRGMBKBKBCTMGKM TCTGTAGMCCAGGCTGGCCTYGW TCTGHAGMCCAGGCTGGBCYYVDKM Direction: Forward Position #: 4 Overlap #: 20 Alignment: ---VVAGMBRDRGMBKBKBCTMGKM TCTGTAGMCCAGGCTGGCCTYGW-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 46 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C046 C007 Reverse Complement Original Motif YSWGTTCKAGGYCASY KTTSTGAGTTCVAGGMCAGCCTS CCTSYBRRKTYYMRGBCMVBKTT Direction: Backward Position #: 5 Overlap #: 16 Alignment: ---YSWGTTCKAGGYCASY---- KTTSTGAGTTCVAGGMCAGCCTS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C040 Combined Motif Original Motif Original Motif CCTSYBRRKTYYMRGBCMVBKTT RSTGASYTCMARSYCAGY CCTVCTGRBTTCMAGSYCAGBTT Direction: Forward Position #: 4 Overlap #: 18 Alignment: CCTSYBRRKTYYMRGBCMVBKTT ---RSTGASYTCMARSYCAGY-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C009 Original Motif Reverse Complement CCTVCTGRBTTCMAGSYCAGBTT MHAGTGCTGGGATTAAAGGCBT MHMSTGCTGGGWTYAARGBCVKBTT Direction: Forward Position #: 3 Overlap #: 20 Alignment: --CCTVCTGRBTTCMAGSYCAGBTT MHAGTGCTGGGATTAAAGGCBT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C048 Combined Motif Original Motif Original Motif MHMSTGCTGGGWTYAARGBCVKBTT SGAGGCWSWGGCAGSC TTBGRGDYTVAGGSMGBBMHMSTGC Direction: Backward Position #: 3 Overlap #: 16 Alignment: MHMSTGCTGGGWTYAARGBCVKBTT -------SGAGGCWSWGGCAGSC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C019 Combined Motif Reverse Complement Reverse Complement GCASRHRBBCYSCCTVAKHCKCVAA CTGCCTCCCAAGTGCTGGGMWR GCASRCDGCCTCCCDARTSCTSGRAWR Direction: Forward Position #: 6 Overlap #: 20 Alignment: GCASRHRBBCYSCCTVAKHCKCVAA-- -----CTGCCTCCCAAGTGCTGGGMWR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 47 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C047 C013 Original Motif Original Motif TSGAAMTCACTMKGTASA WVCTGGAACTCACTHTGTAGACCAGGM CCAGGMTGGAACTCACTHTGTAGAWVC Direction: Backward Position #: 7 Overlap #: 18 Alignment: ---TSGAAMTCACTMKGTASA------ WVCTGGAACTCACTHTGTAGACCAGGM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C124 Original Motif Original Motif CCAGGMTGGAACTCACTHTGTAGAWVC WSACSRSGCTGSYSTCSW WSACCAGGCTGGHVYYCACTHTGTAGAWVC Direction: Forward Position #: 4 Overlap #: 15 Alignment: ---CCAGGMTGGAACTCACTHTGTAGAWVC WSACSRSGCTGSYSTCSW------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C099 Original Motif Original Motif WSACCAGGCTGGHVYYCACTHTGTAGAWVC MYCCCMGCACTCKGGARK MYCHCMSCASKCTGGARBYCACTHTGTAGAWVC Direction: Forward Position #: 4 Overlap #: 15 Alignment: ---WSACCAGGCTGGHVYYCACTHTGTAGAWVC MYCCCMGCACTCKGGARK--------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C027 Combined Motif Reverse Complement Reverse Complement GVWTCTACADAGTGMVKTCCAGRSTGSYGDGKR WHKAGACAGGGTTTCMCTGKY GVWTCTASAVAGKGWDTYCCWGDBTGSYGDGKR Direction: Forward Position #: 4 Overlap #: 21 Alignment: GVWTCTACADAGTGMVKTCCAGRSTGSYGDGKR ---WHKAGACAGGGTTTCMCTGKY--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C019 Original Motif Reverse Complement GVWTCTASAVAGKGWDTYCCWGDBTGSYGDGKR CTGCCTCCCAAGTGCTGGGMWR SBDYCTMCMVAGTGCTKBSMWRDBTGSYGDGKR Direction: Forward Position #: 1 Overlap #: 22 Alignment: GVWTCTASAVAGKGWDTYCCWGDBTGSYGDGKR CTGCCTCCCAAGTGCTGGGMWR----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 48 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C048 C020 Reverse Complement Original Motif GSCTGCCWSWGCCTCS BSCVCCSCCVCSCCCACS SSCDSCCYCHSCCYCVCS Direction: Forward Position #: 1 Overlap #: 16 Alignment: GSCTGCCWSWGCCTCS-- BSCVCCSCCVCSCCCACS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C037 Combined Motif Original Motif Original Motif SSCDSCCYCHSCCYCVCS SVCCGBCMCCSYCMCCVB SSCBSCCVSCVCCBCCMCCVB Direction: Forward Position #: 4 Overlap #: 15 Alignment: SSCDSCCYCHSCCYCVCS--- ---SVCCGBCMCCSYCMCCVB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C085 Reverse Complement Original Motif BVGGRGGBGGVGSVGGSBGSS VSGRSBHAGARDVSGRS VSGGSDVRGRGDVSGGGSBGSS Direction: Forward Position #: 2 Overlap #: 16 Alignment: -BVGGRGGBGGVGSVGGSBGSS VSGRSBHAGARDVSGRS----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Original Motif Reverse Complement VSGGSDVRGRGDVSGGGSBGSS GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC VSGGGSSRGGGGSSGGGGBGBGGVMGGSHGKGSC Direction: Forward Position #: 5 Overlap #: 18 Alignment: VSGGSDVRGRGDVSGGGSBGSS------------ ----GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C066 Combined Motif Reverse Complement Original Motif GSCYCHSCCYVCCBCBCCCCSSCCCCMSSCCCSV MAMTCCCMSKGCCTCTK VVMYCYBCCTGCCYCYBCCCSSCCCCMSSCCCSV Direction: Forward Position #: 1 Overlap #: 17 Alignment: GSCYCHSCCYVCCBCBCCCCSSCCCCMSSCCCSV MAMTCCCMSKGCCTCTK----------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 49 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C049 C010 Reverse Complement Reverse Complement AWTTATTTTWWTW WWTTTTTTTTTTWWTTTTWWW AWTTWTTTTTTTWWTTTTWWW Direction: Forward Position #: 1 Overlap #: 13 Alignment: AWTTATTTTWWTW-------- WWTTTTTTTTTTWWTTTTWWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C001 Combined Motif Original Motif Reverse Complement AWTTWTTTTTTTWWTTTTWWW WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW AWTTWTTTTTTTWWTTTTWTTTTTWWTTTTTWWW Direction: Forward Position #: 5 Overlap #: 17 Alignment: AWTTWTTTTTTTWWTTTTWWW------------- ----WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C043 Combined Motif Reverse Complement Original Motif WWWAAAAAWWAAAAAWAAAAWWAAAAAAAWAAWT WWAAWAAAAAARAATW WWWAAAAAAAWAAAAAAAAAWWAAAAAAAWAAWT Direction: Forward Position #: 7 Overlap #: 16 Alignment: WWWAAAAAWWAAAAAWAAAAWWAAAAAAAWAAWT ------WWAAWAAAAAARAATW------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C090 Combined Motif Original Motif Original Motif WWWAAAAAAAWAAAAAAAAAWWAAAAAAAWAAWT WAAWWAAADWWWAW WWWAAAAWAAWAAAAAADAAWWAAAAAAAWAAWT Direction: Forward Position #: 8 Overlap #: 14 Alignment: WWWAAAAAAAWAAAAAAAAAWWAAAAAAAWAAWT -------WAAWWAAADWWWAW------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C131 Combined Motif Reverse Complement Reverse Complement AWTTWTTTTTTTWWTTDTTTTTTWTTWTTTTWWW WWTTHBKTTDTTWW WWTTHTTTTTTTWWTTDTTTTTTWTTWTTTTWWW Direction: Forward Position #: 1 Overlap #: 14 Alignment: AWTTWTTTTTTTWWTTDTTTTTTWTTWTTTTWWW WWTTHBKTTDTTWW-------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 50 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C050 C014 Reverse Complement Original Motif CYKGAGGSMGRGGCVG YSGGAGGCAGAGGCMS CBGGAGGCAGRGGCMG Direction: Forward Position #: 1 Overlap #: 16 Alignment: CYKGAGGSMGRGGCVG YSGGAGGCAGAGGCMS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C083 Reverse Complement Original Motif CYGCCKCTGCCTCCBG CKBCCTSYRSCTCMMG CBGCCTCYGCCTCCVG Direction: Forward Position #: 1 Overlap #: 16 Alignment: CYGCCKCTGCCTCCBG CKBCCTSYRSCTCMMG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C086 Reverse Complement Original Motif CVGGAGGCMGAGGCVG CSGGAGKCWGMGGSASG CVGGAGKCHGMGGCVGG Direction: Forward Position #: 1 Overlap #: 16 Alignment: CVGGAGGCMGAGGCVG- CSGGAGKCWGMGGSASG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C101 Combined Motif Original Motif Reverse Complement CVGGAGKCHGMGGCVGG MTGGGASVSYSAGGSAK CVGVWGGSAGVGBSAGGSAK Direction: Forward Position #: 4 Overlap #: 14 Alignment: CVGGAGKCHGMGGCVGG--- ---MTGGGASVSYSAGGSAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Original Motif Reverse Complement CVGVWGGSAGVGBSAGGSAK GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC CVGVDGGSRGGGSSRGGSDKKGGVMGGSHGKGSC Direction: Forward Position #: 5 Overlap #: 16 Alignment: CVGVWGGSAGVGBSAGGSAK-------------- ----GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 51 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C051 C008 Original Motif Original Motif SGCCCCCHCCCS SSCCSSCCCCSSCCSS SGCCCCCVCCSSSSCC Direction: Backward Position #: 1 Overlap #: 12 Alignment: ----SGCCCCCHCCCS SSCCSSCCCCSSCCSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C104 Original Motif Original Motif SGCCCCCVCCSSSSCC SSCCYCCCCDCCSS SSCCCCCCCCCCSSCC Direction: Forward Position #: 1 Overlap #: 14 Alignment: SGCCCCCVCCSSSSCC SSCCYCCCCDCCSS-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C037 Combined Motif Original Motif Original Motif SSCCCCCCCCCCSSCC SVCCGBCMCCSYCMCCVB SSCSVCCVCCMCCSCCMCCVB Direction: Forward Position #: 4 Overlap #: 13 Alignment: SSCCCCCCCCCCSSCC----- ---SVCCGBCMCCSYCMCCVB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C094 Original Motif Original Motif SSCSVCCVCCMCCSCCMCCVB SSHCCCSGCCCCSG SSCCCCCSCCCCSSCCMCCVB Direction: Forward Position #: 1 Overlap #: 14 Alignment: SSCSVCCVCCMCCSCCMCCVB SSHCCCSGCCCCSG------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C020 Combined Motif Original Motif Original Motif SSCCCCCSCCCCSSCCMCCVB BSCVCCSCCVCSCCCACS SSCVCCSCCCCCSCCCMCCVB Direction: Forward Position #: 1 Overlap #: 18 Alignment: SSCCCCCSCCCCSSCCMCCVB BSCVCCSCCVCSCCCACS--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 52 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C052 C007 Original Motif Original Motif GAGTBVSAGGCMAGVC KTTSTGAGTTCVAGGMCAGCCTS KTTSTGAGTTCVAGGHCAGCCTS Direction: Forward Position #: 6 Overlap #: 16 Alignment: -----GAGTBVSAGGCMAGVC-- KTTSTGAGTTCVAGGMCAGCCTS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C008 Reverse Complement Reverse Complement SAGGCTGDCCTVGAACTCASAAY SSGGSSGGGGSSGGSS SVGGCBGGSSTSGRVCTCASAAY Direction: Forward Position #: 1 Overlap #: 16 Alignment: SAGGCTGDCCTVGAACTCASAAY SSGGSSGGGGSSGGSS------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Reverse Complement Original Motif KTTSTGAGBMCSASSCCVGCCVS GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC KTTSKGMBCHCCMBSCCHSCCCCCSSCCCCCSSC Direction: Forward Position #: 5 Overlap #: 19 Alignment: KTTSTGAGBMCSASSCCVGCCVS----------- ----GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C039 Combined Motif Reverse Complement Original Motif GSSGGGGGSSGGGGGSDGGSBRGGDGBYCRSAAY SMAGRSCAGSSYGGBS GSSGGGGGRGGGSRGSBBGGBSGGDGBYCRSAAY Direction: Forward Position #: 7 Overlap #: 16 Alignment: GSSGGGGGSSGGGGGSDGGSBRGGDGBYCRSAAY ------SMAGRSCAGSSYGGBS------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C012 Combined Motif Reverse Complement Reverse Complement KTTSKGMBCHCCSBCCBBSCKSCCCKCCCCCSSC YRTCTCTCTCTRYCTCTRR KTTSKGHVYCYCBCBCBVBCTSBVVKCCCCCSSC Direction: Forward Position #: 7 Overlap #: 19 Alignment: KTTSKGMBCHCCSBCCBBSCKSCCCKCCCCCSSC ------YRTCTCTCTCTRYCTCTRR--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 53 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C053 C132 Original Motif Original Motif RMACRGAGAAAYCCTGKY WCAGRGWGAGAWCYAGGW DCASRGAGARATCYWGGH Direction: Forward Position #: 1 Overlap #: 18 Alignment: RMACRGAGAAAYCCTGKY WCAGRGWGAGAWCYAGGW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C013 Reverse Complement Original Motif HCCWKGATKTCTCMSTGD WVCTGGAACTCACTHTGTAGACCAGGM WCCTGGAWBTCWCHBTGTAGACCAGGM Direction: Forward Position #: 1 Overlap #: 18 Alignment: HCCWKGATKTCTCMSTGD--------- WVCTGGAACTCACTHTGTAGACCAGGM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C042 Original Motif Original Motif WCCTGGAWBTCWCHBTGTAGACCAGGM WGTCCKRGAACYMACTCW WGWCCTRGAACTCACTCTGTAGACCAGGM Direction: Forward Position #: 3 Overlap #: 16 Alignment: --WCCTGGAWBTCWCHBTGTAGACCAGGM WGTCCKRGAACYMACTCW----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C002 Combined Motif Reverse Complement Reverse Complement YCCTGGTCTACAGAGTGAGTTCMAGGWCW MKKTKKGTGTGTGTGTGTKKKTA YCCTGGTCTACAGAGTGAGTTCMAKGTBDGTGTGTGTGTGTKKKTA Direction: Forward Position #: 24 Overlap #: 6 Alignment: YCCTGGTCTACAGAGTGAGTTCMAGGWCW----------------- -----------------------MKKTKKGTGTGTGTGTGTKKKTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C057 Combined Motif Original Motif Original Motif YCCTGGTCTACAGAGTGAGTTCMAKGTBDGTGTGTGTGTGTKKKTA WRMARYAAMARYAAMAWH YCCTGGTCTAMADWRWRARTWMMADDTBDGTGTGTGTGTGTKKKTA Direction: Forward Position #: 9 Overlap #: 18 Alignment: YCCTGGTCTACAGAGTGAGTTCMAKGTBDGTGTGTGTGTGTKKKTA --------WRMARYAAMARYAAMAWH-------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 54 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C054 C003 Original Motif Original Motif SSCCDCCCCCCCSS GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC CCCCVCCCCCCCSCGSCYCHSCCYVCCYCC Direction: Backward Position #: 1 Overlap #: 14 Alignment: ----------------SSCCDCCCCCCCSS GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C023 Combined Motif Original Motif Original Motif CCCCVCCCCCCCSCGSCYCHSCCYVCCYCC SSCCSCBHCSCCSS SSCCSCCCCCCCSSGSCYCHSCCYVCCYCC Direction: Forward Position #: 1 Overlap #: 14 Alignment: CCCCVCCCCCCCSCGSCYCHSCCYVCCYCC SSCCSCBHCSCCSS---------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C008 Combined Motif Reverse Complement Reverse Complement GGKGGVMGGSHGKGSCSSGGGGGGGSGGSS SSGGSSGGGGSSGGSS GGKGGVVGGSVGGGGCSGGSSGGGGSGGSS Direction: Forward Position #: 6 Overlap #: 16 Alignment: GGKGGVMGGSHGKGSCSSGGGGGGGSGGSS -----SSGGSSGGGGSSGGSS--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C104 Combined Motif Reverse Complement Original Motif SSCCSCCCCSSCCSGCCCCVSCCVVCCYCC SSCCYCCCCDCCSS SSCCBCCCCVCCSSGCCCCVSCCVVCCYCC Direction: Forward Position #: 1 Overlap #: 14 Alignment: SSCCSCCCCSSCCSGCCCCVSCCVVCCYCC SSCCYCCCCDCCSS---------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C004 Combined Motif Original Motif Original Motif SSCCBCCCCVCCSSGCCCCVSCCVVCCYCC SSSSSCSSSSSCCSSSSCCSCSSSSSS SSCCSCCCCSSCCSSSCCCVSCCSSCCYCC Direction: Forward Position #: 1 Overlap #: 27 Alignment: SSCCBCCCCVCCSSGCCCCVSCCVVCCYCC SSSSSCSSSSSCCSSSSCCSCSSSSSS--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 55 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C055 C012 Original Motif Original Motif MKAGAGMKMKAGAGMK MKAGAGMKAGAGAGAGAKM MKAGAGMKAGAGAGAGAKM Direction: Forward Position #: 1 Overlap #: 16 Alignment: MKAGAGMKMKAGAGMK--- MKAGAGMKAGAGAGAGAKM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C011 Combined Motif Original Motif Original Motif MKAGAGMKAGAGAGAGAKM KMGAGAKMGAGAGAGAKM MKAGAGAGAKAGAGAGAGAKM Direction: Forward Position #: 4 Overlap #: 16 Alignment: MKAGAGMKAGAGAGAGAKM-- ---KMGAGAKMGAGAGAGAKM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C017 Original Motif Original Motif MKAGAGAGAKAGAGAGAGAKM WSWGAGASWSAGAGASWS HBAGAGAGAGAGAGAGASAKM Direction: Forward Position #: 1 Overlap #: 18 Alignment: MKAGAGAGAKAGAGAGAGAKM WSWGAGASWSAGAGASWS--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C121 Combined Motif Reverse Complement Original Motif RRTSTCTCTCTCTCTCTCTBH MRCCCTRGCYSTCCYK RRTVDCYCTVKCTSTCYYKBH Direction: Forward Position #: 4 Overlap #: 16 Alignment: RRTSTCTCTCTCTCTCTCTBH ---MRCCCTRGCYSTCCYK-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C036 Reverse Complement Original Motif HBRKKGASAGYVAGKGDVAKM MKAGMKMGAGAKMKAGMK MKAGVGMGAGHBAGDGHDAKM Direction: Forward Position #: 1 Overlap #: 18 Alignment: HBRKKGASAGYVAGKGDVAKM MKAGMKMGAGAKMKAGMK--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 56 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C056 C001 Original Motif Original Motif AWMAAAYWRAMAAWH WWWAAAAAWWAAAAAWAAAAAWWAAAAHWW WWWAAAAAWWAAAAAWAAAAHWAAAAAWWW Direction: Forward Position #: 15 Overlap #: 15 Alignment: --------------AWMAAAYWRAMAAWH- WWWAAAAAWWAAAAAWAAAAAWWAAAAHWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C016 Combined Motif Original Motif Original Motif WWWAAAAAWWAAAAAWAAAAHWAAAAAWWW HWAAWAAAHWAAMAWAMAAWW WWWAAAWWAAWAAAHWAAAAWAAAAAAWWW Direction: Forward Position #: 7 Overlap #: 21 Alignment: WWWAAAAAWWAAAAAWAAAAHWAAAAAWWW ------HWAAWAAAHWAAMAWAMAAWW--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C010 Reverse Complement Reverse Complement WWWTTTTTTWTTTTWHTTTWTTWWTTTWWW WWTTTTTTTTTTWWTTTTWWW WWTTWTTTTTTTWTTTTTHTTTWTTWWTTTWWW Direction: Forward Position #: 4 Overlap #: 18 Alignment: ---WWWTTTTTTWTTTTWHTTTWTTWWTTTWWW WWTTTTTTTTTTWWTTTTWWW------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C139 Original Motif Reverse Complement WWTTWTTTTTTTWTTTTTHTTTWTTWWTTTWWW WWTTTTVWWWBTTTYWW WWTTTTHWWTBTTTTWWTTTTHTTTWTTWWTTTWWW Direction: Forward Position #: 4 Overlap #: 14 Alignment: ---WWTTWTTTTTTTWTTTTTHTTTWTTWWTTTWWW WWTTTTVWWWBTTTYWW------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C030 Combined Motif Reverse Complement Original Motif WWWAAAWWAAWAAAHAAAAWWAAAAVAWWHAAAAWW WYAAAAAMAAAAAAAAWAM WWAAAAAAAAAAAAAAWAMWWAAAAVAWWHAAAAWW Direction: Forward Position #: 1 Overlap #: 19 Alignment: WWWAAAWWAAWAAAHAAAAWWAAAAVAWWHAAAAWW WYAAAAAMAAAAAAAAWAM----------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 57 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C057 C001 Original Motif Original Motif WRMARYAAMARYAAMAWH WWWAAAAAWWAAAAAWAAAAAWWAAAAHWW WWWAAAAWAAAAAWAAAAAHWWWAAAAAWW Direction: Backward Position #: 3 Overlap #: 18 Alignment: ----------WRMARYAAMARYAAMAWH-- WWWAAAAAWWAAAAAWAAAAAWWAAAAHWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C010 Combined Motif Original Motif Original Motif WWWAAAAWAAAAAWAAAAAHWWWAAAAAWW WWWAAAAWWAAAAAAAAAAWW WWWAAAAAWAAAAHAAAAAAWWWAAAAAWW Direction: Forward Position #: 2 Overlap #: 21 Alignment: WWWAAAAWAAAAAWAAAAAHWWWAAAAAWW -WWWAAAAWWAAAAAAAAAAWW-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C030 Combined Motif Original Motif Original Motif WWWAAAAAWAAAAHAAAAAAWWWAAAAAWW WYAAAAAMAAAAAAAAWAM WWWAAAAHAAAAAMAAAAAAAAWAAAAAWW Direction: Forward Position #: 7 Overlap #: 19 Alignment: WWWAAAAAWAAAAHAAAAAAWWWAAAAAWW ------WYAAAAAMAAAAAAAAWAM----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C016 Combined Motif Reverse Complement Reverse Complement WWTTTTTWTTTTTTTTYTTTTTHTTTTWWW WWTTYTWTYTTWDTTTWTTWH WWTTTTWWTTYTWTTTTTKTTTHTTTHWWW Direction: Forward Position #: 7 Overlap #: 21 Alignment: WWTTTTTWTTTTTTTTYTTTTTHTTTTWWW ------WWTTYTWTYTTWDTTTWTTWH--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C032 Combined Motif Reverse Complement Original Motif WWWHAAAHAAARAAAAAWAMAAWWAAAAWW HWAAWYDAAAMWRWAMWR WWWHAAHWAAWHWAAAAWAWAAWDAAAAWW Direction: Forward Position #: 7 Overlap #: 18 Alignment: WWWHAAAHAAARAAAAAWAMAAWWAAAAWW ------HWAAWYDAAAMWRWAMWR------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 58 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C058 C112 Original Motif Original Motif CYCCBCSGVCYCCBC CCBCYSSSGCCCCSS CCCCBSSSRCCCCBS Direction: Backward Position #: 1 Overlap #: 15 Alignment: CYCCBCSGVCYCCBC CCBCYSSSGCCCCSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C037 Combined Motif Reverse Complement Reverse Complement SBGGGGMSSSBGGGG BVGGYGKSGGYGBCGGVS SBGVGGHGSSGGBGGCGGVS Direction: Forward Position #: 3 Overlap #: 13 Alignment: SBGGGGMSSSBGGGG----- --BVGGYGKSGGYGBCGGVS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C140 Combined Motif Reverse Complement Original Motif SVCCGCCBCCSSCDCCVCBS BSCCBCVSSSBCCYHVG SVCCSCCCCSSSSSCYVVVS Direction: Forward Position #: 3 Overlap #: 17 Alignment: SVCCGCCBCCSSCDCCVCBS --BSCCBCVSSSBCCYHVG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Reverse Complement Reverse Complement SVVVKGSSSSSGGGGSGGVS GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC SVVVGGSSGGGGGSGGGGVSKGGVMGGSHGKGSC Direction: Forward Position #: 5 Overlap #: 16 Alignment: SVVVKGSSSSSGGGGSGGVS-------------- ----GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C004 Original Motif Reverse Complement SVVVGGSSGGGGGSGGGGVSKGGVMGGSHGKGSC SSSSSSGSGGSSSSGGSSSSSGSSSSS SSSSSSSSGGSSSSGGGGSGGGGSSSGGVMGGSHGKGSC Direction: Forward Position #: 6 Overlap #: 22 Alignment: -----SVVVGGSSGGGGGSGGGGVSKGGVMGGSHGKGSC SSSSSSGSGGSSSSGGSSSSSGSSSSS------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 59 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C059 C008 Original Motif Original Motif SYCCDCCCCCRG SSCCSSCCCCSSCCSS SCCCBSCCCCVSCCSS Direction: Forward Position #: 1 Overlap #: 12 Alignment: SYCCDCCCCCRG---- SSCCSSCCCCSSCCSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Reverse Complement Reverse Complement SSGGSVGGGGSBGGGS GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC SSGGSSGGGGGVGGGGGGGKGGVMGGSHGKGSC Direction: Forward Position #: 4 Overlap #: 13 Alignment: SSGGSVGGGGSBGGGS----------------- ---GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C081 Combined Motif Reverse Complement Original Motif GSCYCHSCCYVCCYCCCCCCCVCCCCCSSCCSS BCCSHCCCSCMG GSCYCHSCCCVHCCCSCHSCCVCCCCCSSCCSS Direction: Forward Position #: 8 Overlap #: 12 Alignment: GSCYCHSCCYVCCYCCCCCCCVCCCCCSSCCSS -------BCCSHCCCSCMG-------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C054 Combined Motif Reverse Complement Reverse Complement SSGGSSGGGGGVGGSDGSGGGDVGGGSHGKGSC SSGGGGGGGHGGSS SSGGGGGGGBGGGGSDGSGGGDVGGGSHGKGSC Direction: Forward Position #: 1 Overlap #: 14 Alignment: SSGGSSGGGGGVGGSDGSGGGDVGGGSHGKGSC SSGGGGGGGHGGSS------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C037 Combined Motif Reverse Complement Original Motif GSCYCHSCCCVHCCCSCHSCCCCBCCCCCCCSS SVCCGBCMCCSYCMCCVB GSCYCHSSCCCVCCCCCVSCMCCVCCCCCCCSS Direction: Forward Position #: 8 Overlap #: 18 Alignment: GSCYCHSCCCVHCCCSCHSCCCCBCCCCCCCSS -------SVCCGBCMCCSYCMCCVB-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 60 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C060 C041 Original Motif Original Motif SMGGCAKMGGCAKS CSGAGGCMKAGGCASS CSGAGGCAKAGGCAGS Direction: Forward Position #: 3 Overlap #: 14 Alignment: --SMGGCAKMGGCAKS CSGAGGCMKAGGCASS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C048 Original Motif Reverse Complement CSGAGGCAKAGGCAGS GSCTGCCWSWGCCTCS SSSDGSCWSAGSCWSS Direction: Forward Position #: 1 Overlap #: 16 Alignment: CSGAGGCAKAGGCAGS GSCTGCCWSWGCCTCS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C118 Combined Motif Reverse Complement Original Motif SSWGSCTSWGSCDSSS GMCTGCSWSTGCCKC SSWGVCTSYGDSTGCCKC Direction: Forward Position #: 4 Overlap #: 13 Alignment: SSWGSCTSWGSCDSSS-- ---GMCTGCSWSTGCCKC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C086 Original Motif Reverse Complement SSWGVCTSYGDSTGCCKC CSTSCCYCWGRCTCCSG CSDGCCTSHGVCTSCSKC Direction: Forward Position #: 1 Overlap #: 17 Alignment: SSWGVCTSYGDSTGCCKC CSTSCCYCWGRCTCCSG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C028 Original Motif Reverse Complement CSDGCCTSHGVCTSCSKC VBTSVCTSTGSSTCVB VSTGSCTSTGVCTSSSKC Direction: Forward Position #: 1 Overlap #: 16 Alignment: CSDGCCTSHGVCTSCSKC VBTSVCTSTGSSTCVB-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 61 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C061 C073 Reverse Complement Reverse Complement RGGCCDGCCTBRRCMY KAGYSYKGGCTKRSCWYK KRGBCCKGSCTBRVCHYK Direction: Forward Position #: 2 Overlap #: 16 Alignment: -RGGCCDGCCTBRRCMY- KAGYSYKGGCTKRSCWYK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C122 Original Motif Original Motif KRGBCCKGSCTBRVCHYK YAGCCCWGSCWSBCCTR BAGCCCDGSCTBBCCTBK Direction: Forward Position #: 1 Overlap #: 17 Alignment: KRGBCCKGSCTBRVCHYK YAGCCCWGSCWSBCCTR- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C005 Combined Motif Original Motif Reverse Complement BAGCCCDGSCTBBCCTBK WCKAGGCCAGCCTGGYCTACAGA BAGHCBAGGCYAGCCTGGYCTACAGA Direction: Forward Position #: 4 Overlap #: 15 Alignment: BAGCCCDGSCTBBCCTBK-------- ---WCKAGGCCAGCCTGGYCTACAGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C096 Original Motif Reverse Complement BAGHCBAGGCYAGCCTGGYCTACAGA RKGGCMMGSCKRGRKY DDGVCHAGSCBRGVBTGGYCTACAGA Direction: Forward Position #: 1 Overlap #: 16 Alignment: BAGHCBAGGCYAGCCTGGYCTACAGA RKGGCMMGSCKRGRKY---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C093 Combined Motif Reverse Complement Original Motif TCTGTAGMCCABVCKVGSCTDGVCHH AKCCASMBSCCKSTGCMT TCTGTAGVCVVVVSCCGSYBCVBCHH Direction: Forward Position #: 6 Overlap #: 18 Alignment: TCTGTAGMCCABVCKVGSCTDGVCHH -----AKCCASMBSCCKSTGCMT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 62 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C062 C016 Original Motif Original Motif WWAMAWRMAMAYWAAHWW HWAAWAAAHWAAMAWAMAAWW AWAAAHAMAMAWAAAAWWHWA Direction: Backward Position #: 1 Overlap #: 18 Alignment: ---WWAMAWRMAMAYWAAHWW HWAAWAAAHWAAMAWAMAAWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C001 Combined Motif Original Motif Original Motif AWAAAHAMAMAWAAAAWWHWA WWWAAAAAWWAAAAAWAAAAAWWAAAAHWW AWAAAWAAAAAWWWAAAAWWAAAAAWWAAAAHWW Direction: Forward Position #: 5 Overlap #: 17 Alignment: AWAAAHAMAMAWAAAAWWHWA------------- ----WWWAAAAAWWAAAAAWAAAAAWWAAAAHWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C030 Combined Motif Reverse Complement Reverse Complement WWHTTTTWWTTTTTWWTTTTWWWTTTTTWTTTWT YTWTTTTTTTTYTTTTTMW WWHTTTTTWWTTTTWTTTTTTTTTHTTTWTTTWT Direction: Forward Position #: 8 Overlap #: 19 Alignment: WWHTTTTWWTTTTTWWTTTTWWWTTTTTWTTTWT -------YTWTTTTTTTTYTTTTTMW-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C010 Combined Motif Original Motif Reverse Complement WWHTTTTTWWTTTTWTTTTTTTTTHTTTWTTTWT WWTTTTTTTTTTWWTTTTWWW WWHTTTTWWTTTTTTTTTTWWTTTYWWWWTTTWT Direction: Forward Position #: 8 Overlap #: 21 Alignment: WWHTTTTTWWTTTTWTTTTTTTTTHTTTWTTTWT -------WWTTTTTTTTTTWWTTTTWWW------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C032 Combined Motif Original Motif Reverse Complement WWHTTTTWWTTTTTTTTTTWWTTTYWWWWTTTWT KWYTWKWYTTTDMWTTWH WWHTTTTDWTTWTTTTTTTWWTTTHWWWWTTTWT Direction: Forward Position #: 8 Overlap #: 18 Alignment: WWHTTTTWWTTTTTTTTTTWWTTTYWWWWTTTWT -------KWYTWKWYTTTDMWTTWH--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 63 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C063 C024 Reverse Complement Reverse Complement TTHRWTTTTWYRTTY THTTDMWTTTTWKMTTDA THTTHVWTTTTWTVTTHA Direction: Forward Position #: 3 Overlap #: 15 Alignment: --TTHRWTTTTWYRTTY- THTTDMWTTTTWKMTTDA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C016 Combined Motif Reverse Complement Original Motif THAABAWAAAAWBHAAHA HWAAWAAAHWAAMAWAMAAWW THAHWAAAAAAHWAAAAWAMAAWW Direction: Forward Position #: 4 Overlap #: 15 Alignment: THAABAWAAAAWBHAAHA------ ---HWAAWAAAHWAAMAWAMAAWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C079 Combined Motif Original Motif Original Motif THAHWAAAAAAHWAAAAWAMAAWW ADAAAKWAAAAWAKARW THAHWAWAAAWWAAAAWADAAAWW Direction: Forward Position #: 6 Overlap #: 17 Alignment: THAHWAAAAAAHWAAAAWAMAAWW -----ADAAAKWAAAAWAKARW-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C097 Combined Motif Original Motif Original Motif THAHWAWAAAWWAAAAWADAAAWW WBAASWWAAAAWWSAAVW THAHWWHAAVWWAAAAWWVAADWW Direction: Forward Position #: 6 Overlap #: 18 Alignment: THAHWAWAAAWWAAAAWADAAAWW -----WBAASWWAAAAWWSAAVW- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C001 Combined Motif Reverse Complement Reverse Complement WWDTTVWWTTTTWWBTTHWWHTHA WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW WWDTTHWWTTTTWWHTTTTWTTTTTWWTTTTTWWW Direction: Forward Position #: 6 Overlap #: 19 Alignment: WWDTTVWWTTTTWWBTTHWWHTHA----------- -----WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 64 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C064 C131 Original Motif Original Motif DAAAKAAAAMAAK WWAADAARVHAAWW WWWAADAAAAHAAW Direction: Backward Position #: 2 Overlap #: 13 Alignment: DAAAKAAAAMAAK- WWAADAARVHAAWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C010 Combined Motif Original Motif Original Motif WWWAADAAAAHAAW WWWAAAAWWAAAAAAAAAAWW WWWWADAAAWWAAAAAAAAAAWW Direction: Forward Position #: 3 Overlap #: 12 Alignment: WWWAADAAAAHAAW--------- --WWWAAAAWWAAAAAAAAAAWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C079 Combined Motif Original Motif Original Motif WWWWADAAAWWAAAAAAAAAAWW ADAAAKWAAAAWAKARW WWWWADAAADWAAAAAADAAAWW Direction: Forward Position #: 5 Overlap #: 17 Alignment: WWWWADAAAWWAAAAAAAAAAWW ----ADAAAKWAAAAWAKARW-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C152 Combined Motif Reverse Complement Reverse Complement WWTTTDTTTTTTWDTTTDTWWWW YWTKYWTKTKWYKKWR WWTTTWTTTTTTTDTTTKWDWWW Direction: Forward Position #: 5 Overlap #: 16 Alignment: WWTTTDTTTTTTWDTTTDTWWWW ----YWTKYWTKTKWYKKWR--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C024 Combined Motif Original Motif Reverse Complement WWTTTWTTTTTTTDTTTKWDWWW THTTDMWTTTTWKMTTDA WWTTTHTTTTTTTHTTTHWDWWW Direction: Forward Position #: 1 Overlap #: 18 Alignment: WWTTTWTTTTTTTDTTTKWDWWW THTTDMWTTTTWKMTTDA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 65 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C065 C007 Reverse Complement Reverse Complement YSTRGAWCTCASR SAGGCTGYCCTVGAACTCASAAY SAGGCTGYCCTRGAACTCASRAY Direction: Forward Position #: 9 Overlap #: 13 Alignment: --------YSTRGAWCTCASR-- SAGGCTGYCCTVGAACTCASAAY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C040 Original Motif Reverse Complement SAGGCTGYCCTRGAACTCASRAY KCTGMSKTYGAMSTCASM KCTGAGGYTGHMCTCRRMCTCASRAY Direction: Forward Position #: 4 Overlap #: 15 Alignment: ---SAGGCTGYCCTRGAACTCASRAY KCTGMSKTYGAMSTCASM-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C013 Reverse Complement Reverse Complement KTKSTGAGYKKGAGRHCAMCCTCAGY YCCTGGTCTACADAGTGAGTTCCAGVW YCCTGGTYYWSAGWGTGAGKTCMASSWCAGY Direction: Forward Position #: 6 Overlap #: 22 Alignment: -----KTKSTGAGYKKGAGRHCAMCCTCAGY YCCTGGTCTACADAGTGAGTTCCAGVW---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C036 Combined Motif Reverse Complement Original Motif KCTGWSSTRGARCTCACWCTSWMKACCAGGM MKAGMKMGAGAKMKAGMK KCTGWSVTRGMDCKMRHTMTVDMKACCAGGM Direction: Forward Position #: 7 Overlap #: 18 Alignment: KCTGWSSTRGARCTCACWCTSWMKACCAGGM ------MKAGMKMGAGAKMKAGMK------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C132 Combined Motif Original Motif Original Motif KCTGWSVTRGMDCKMRHTMTVDMKACCAGGM WCAGRGWGAGAWCYAGGW KCTGWSHYAGVGHGAGDTCTAGVDACCAGGM Direction: Forward Position #: 7 Overlap #: 18 Alignment: KCTGWSVTRGMDCKMRHTMTVDMKACCAGGM ------WCAGRGWGAGAWCYAGGW------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 66 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C066 C141 Original Motif Original Motif MAMTCCCMSKGCCTCTK YMATCCYRSYRCTTGKR HAMTCCYVSTRCYTSTD Direction: Backward Position #: 1 Overlap #: 17 Alignment: MAMTCCCMSKGCCTCTK YMATCCYRSYRCTTGKR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Original Motif Original Motif HAMTCCYVSTRCYTSTD GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC HAMKCCYCBBVCYBCYBCCCCCCSSCCCCCSSC Direction: Forward Position #: 4 Overlap #: 14 Alignment: HAMTCCYVSTRCYTSTD---------------- ---GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C012 Combined Motif Original Motif Reverse Complement HAMKCCYCBBVCYBCYBCCCCCCSSCCCCCSSC YRTCTCTCTCTRYCTCTRR YRHBYCYCTCBVYBYCBVVCCCCSSCCCCCSSC Direction: Forward Position #: 1 Overlap #: 19 Alignment: HAMKCCYCBBVCYBCYBCCCCCCSSCCCCCSSC YRTCTCTCTCTRYCTCTRR-------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C140 Combined Motif Reverse Complement Reverse Complement GSSGGGGGSSGGGGVVVGMBMVVGAGMGMBHKK CVDMGGBSSSVGBGGSB GSVVGGGGSSGGGGSBVGMBMVVGAGMGMBHKK Direction: Forward Position #: 1 Overlap #: 17 Alignment: GSSGGGGGSSGGGGVVVGMBMVVGAGMGMBHKK CVDMGGBSSSVGBGGSB---------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C017 Combined Motif Reverse Complement Reverse Complement YRHBYCYCTCBVYBYCVBSCCCCSSCCCCVVSC SWSTCTCTSWSTCTCWSW YRHBYCYSWSTCTCTCHSBCYCHSHCCCCVVSC Direction: Forward Position #: 8 Overlap #: 18 Alignment: YRHBYCYCTCBVYBYCVBSCCCCSSCCCCVVSC -------SWSTCTCTSWSTCTCWSW-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 67 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C067 C010 Original Motif Original Motif WDAAAAAARKAAAD WWWAAAAWWAAAAAAAAAAWW WWWAAAAWWAAAAAAADAAWW Direction: Forward Position #: 8 Overlap #: 14 Alignment: -------WDAAAAAARKAAAD WWWAAAAWWAAAAAAAAAAWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C043 Combined Motif Reverse Complement Reverse Complement WWTTDTTTTTTTWWTTTTWWW WATTMTTTTTTWTTWW WWTTDWTTHTTTTTTTTTWWW Direction: Forward Position #: 5 Overlap #: 16 Alignment: WWTTDTTTTTTTWWTTTTWWW ----WATTMTTTTTTWTTWW- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C131 Combined Motif Original Motif Reverse Complement WWTTDWTTHTTTTTTTTTWWW WWTTHBKTTDTTWW WWTTWWTTHTTTTDTTWTWWW Direction: Forward Position #: 5 Overlap #: 14 Alignment: WWTTDWTTHTTTTTTTTTWWW ----WWTTHBKTTDTTWW--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C079 Combined Motif Original Motif Reverse Complement WWTTWWTTHTTTTDTTWTWWW WKTRTWTTTTWRTTTDT WWTTWTTDHWTTTTTDTTTWW Direction: Forward Position #: 5 Overlap #: 17 Alignment: WWTTWWTTHTTTTDTTWTWWW ----WKTRTWTTTTWRTTTDT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C080 Combined Motif Reverse Complement Original Motif WWAAADAAAAAWHDAAWAAWW WWAAVAAMMHAAWW WWAAWWAAAAAAMDAAWAAWW Direction: Forward Position #: 5 Overlap #: 14 Alignment: WWAAADAAAAAWHDAAWAAWW ----WWAAVAAMMHAAWW--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 68 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C068 C050 Original Motif Original Motif BGCYKCTGCMTCCM CBGCCKCYSCCTCYMG GBGCCKCTGCMTCCMC Direction: Backward Position #: 2 Overlap #: 14 Alignment: -BGCYKCTGCMTCCM- CBGCCKCYSCCTCYMG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C014 Combined Motif Original Motif Reverse Complement GBGCCKCTGCMTCCMC SYGCCTCTGCCTCCSK GBGCYGCYKCHKCCHCCSK Direction: Forward Position #: 4 Overlap #: 13 Alignment: GBGCCKCTGCMTCCMC--- ---SYGCCTCTGCCTCCSK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C022 Combined Motif Original Motif Original Motif GBGCYGCYKCHKCCHCCSK BGCCYCBGSCYCCCSVS GBGBBBCYBCBBCCYCCSBS Direction: Forward Position #: 4 Overlap #: 16 Alignment: GBGCYGCYKCHKCCHCCSK- ---BGCCYCBGSCYCCCSVS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C041 Combined Motif Reverse Complement Original Motif SBSGGKGGBBGBKGBBBCVC CSGAGGCMKAGGCASS SVGRGGSVBVGGBVSSBCVC Direction: Forward Position #: 1 Overlap #: 16 Alignment: SBSGGKGGBBGBKGBBBCVC CSGAGGCMKAGGCASS---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C086 Original Motif Original Motif SVGRGGSVBVGGBVSSBCVC CSGGAGKCWGMGGSASG CSGGRGKCHGMGGSRSGBCVC Direction: Forward Position #: 2 Overlap #: 16 Alignment: -SVGRGGSVBVGGBVSSBCVC CSGGAGKCWGMGGSASG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 69 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C069 C030 Reverse Complement Reverse Complement DHTTYTTMDWMTTYTTHT YTWTTTTTTTTYTTTTTMW YHWTTYTTHTTHTTTTTHW Direction: Forward Position #: 2 Overlap #: 18 Alignment: -DHTTYTTMDWMTTYTTHT YTWTTTTTTTTYTTTTTMW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C010 Combined Motif Reverse Complement Original Motif WHAAAAAHAAHAAMAAWHM WWWAAAAWWAAAAAAAAAAWW WHAAWAAMAAWWAAAAAAAAAAWW Direction: Forward Position #: 4 Overlap #: 16 Alignment: WHAAAAAHAAHAAMAAWHM----- ---WWWAAAAWWAAAAAAAAAAWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C001 Combined Motif Reverse Complement Reverse Complement WWTTTTTTTTTTWWTTYTTWTTHW WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW WWTTTWTHTTTTWWTTTTTWTTTTTWWTTTTTWWW Direction: Forward Position #: 6 Overlap #: 19 Alignment: WWTTTTTTTTTTWWTTYTTWTTHW----------- -----WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C016 Combined Motif Reverse Complement Original Motif WWWAAAAAWWAAAAAWAAAAAWWAAAAHAWAAAWW HWAAWAAAHWAAMAWAMAAWW WWWAAAAAAAHWAAAAWAAAAWWAAAAHAWAAAWW Direction: Forward Position #: 3 Overlap #: 21 Alignment: WWWAAAAAWWAAAAAWAAAAAWWAAAAHAWAAAWW --HWAAWAAAHWAAMAWAMAAWW------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C032 Combined Motif Reverse Complement Reverse Complement WWTTTWTHTTTTWWTTTTWTTTTWHTTTTTTTWWW KWYTWKWYTTTDMWTTWH WWTTWDWYTTTTWWTTTWWTTTTWHTTTTTTTWWW Direction: Forward Position #: 1 Overlap #: 18 Alignment: WWTTTWTHTTTTWWTTTTWTTTTWHTTTTTTTWWW KWYTWKWYTTTDMWTTWH----------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 70 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C070 C017 Original Motif Original Motif GVGABAGAVAGASVK WSWGAGASWSAGAGASWS WSWGRGASASAGAGASDB Direction: Forward Position #: 4 Overlap #: 15 Alignment: ---GVGABAGAVAGASVK WSWGAGASWSAGAGASWS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C012 Combined Motif Reverse Complement Reverse Complement BDSTCTCTSTSTCKCWSW YRTCTCTCTCTRYCTCTRR BDSTVTCTCTCTCTVTCTCTRR Direction: Forward Position #: 4 Overlap #: 15 Alignment: BDSTCTCTSTSTCKCWSW---- ---YRTCTCTCTCTRYCTCTRR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C028 Combined Motif Reverse Complement Reverse Complement MKAGAGAVAGAGAGAGAVASDB VBTSVCTSTGSSTCVB MKAGVSWSRSWSWGRSWSVSDB Direction: Forward Position #: 5 Overlap #: 16 Alignment: MKAGAGAVAGAGAGAGAVASDB ----VBTSVCTSTGSSTCVB-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C011 Combined Motif Reverse Complement Original Motif BDSBSWSKCWSWSKSWSBCTRR KMGAGAKMGAGAGAGAKM BHSDGABHSASASDSABHCTRR Direction: Forward Position #: 1 Overlap #: 18 Alignment: BDSBSWSKCWSWSKSWSBCTRR KMGAGAKMGAGAGAGAKM---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C055 Combined Motif Reverse Complement Original Motif MKAGDBTSDSTSTSDBTCDSHB MKAGAGMKMKAGAGMK MKAGRGHBHBWSWSVBTCDSHB Direction: Forward Position #: 1 Overlap #: 16 Alignment: MKAGDBTSDSTSTSDBTCDSHB MKAGAGMKMKAGAGMK------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 71 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C071 C037 Original Motif Original Motif SVCCACSVSCACCBS SVCCGBCMCCSYCMCCVB SVCCVCCMCCVSCACCVS Direction: Forward Position #: 4 Overlap #: 15 Alignment: ---SVCCACSVSCACCBS SVCCGBCMCCSYCMCCVB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C140 Original Motif Original Motif SVCCVCCMCCVSCACCVS BSCCBCVSSSBCCYHVG SBCCBCCVCSBCCHCCVS Direction: Forward Position #: 1 Overlap #: 17 Alignment: SVCCVCCMCCVSCACCVS BSCCBCVSSSBCCYHVG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C058 Combined Motif Original Motif Original Motif SBCCBCCVCSBCCHCCVS CYCCBCSGVCYCCBC SBCCCCSSSSVCCHCBVS Direction: Forward Position #: 3 Overlap #: 15 Alignment: SBCCBCCVCSBCCHCCVS --CYCCBCSGVCYCCBC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Reverse Complement Reverse Complement SVBGDGGVSSSSGGGGBS GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC SVBGBGGGGGGSGGGGGSGKGGVMGGSHGKGSC Direction: Forward Position #: 4 Overlap #: 15 Alignment: SVBGDGGVSSSSGGGGBS--------------- ---GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C077 Combined Motif Original Motif Reverse Complement SVBGBGGGGGGSGGGGGSGKGGVMGGSHGKGSC BGGGGGSSCCGGGGBS SGGGGGGSSSGGGGBSGSGKGGVMGGSHGKGSC Direction: Forward Position #: 1 Overlap #: 16 Alignment: SVBGBGGGGGGSGGGGGSGKGGVMGGSHGKGSC BGGGGGSSCCGGGGBS----------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 72 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C072 C015 Reverse Complement Original Motif WGCCHVGGCTWS DVAGCCWKGGCTACAVAGCK CKWGSSCBRSMBAGDVAGCC Direction: Backward Position #: 3 Overlap #: 12 Alignment: ------WGCCHVGGCTWS-- DVAGCCWKGGCTACAVAGCK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C073 Combined Motif Reverse Complement Reverse Complement GGCTVDCTVRSKVGSSCWRG KAGYSYKGGCTKRSCWYK GGCTRGCBHGGKCKKGCHDBK Direction: Forward Position #: 4 Overlap #: 17 Alignment: GGCTVDCTVRSKVGSSCWRG- ---KAGYSYKGGCTKRSCWYK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C045 Reverse Complement Original Motif YVDDGCYRGYCCDVGCKAGCC RYAGMCMKGKCTRY BHRGVCHRGBCYRBGCKAGCC Direction: Forward Position #: 1 Overlap #: 14 Alignment: YVDDGCYRGYCCDVGCKAGCC RYAGMCMKGKCTRY------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C041 Combined Motif Original Motif Original Motif BHRGVCHRGBCYRBGCKAGCC CSGAGGCMKAGGCASS BHRGSCBRGGCHDVGSBAGCC Direction: Forward Position #: 5 Overlap #: 16 Alignment: BHRGVCHRGBCYRBGCKAGCC ----CSGAGGCMKAGGCASS- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C114 Original Motif Reverse Complement BHRGSCBRGGCHDVGSBAGCC SMAGACRRGGMTKS VHAGVCRRGGCTKVGSBAGCC Direction: Forward Position #: 1 Overlap #: 14 Alignment: BHRGSCBRGGCHDVGSBAGCC SMAGACRRGGMTKS------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 73 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C073 C005 Original Motif Reverse Complement YMWGSMYAGCCRKSKCTR WCKAGGCCAGCCTGGYCTACAGA ABVHSVSCMKSSDSBRCWRWCKA Direction: Backward Position #: 2 Overlap #: 18 Alignment: ----YMWGSMYAGCCRKSKCTR- WCKAGGCCAGCCTGGYCTACAGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C035 Reverse Complement Reverse Complement TYGWMWGKVSDSSYRGSBSDVBT WWTTTMYAGACRKGGTWW WWTTKHHAGACVDGGTDDSBSDVBT Direction: Forward Position #: 3 Overlap #: 16 Alignment: --TYGWMWGKVSDSSYRGSBSDVBT WWTTTMYAGACRKGGTWW------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C015 Reverse Complement Reverse Complement ABVHSVSHDACCHVGTCTDHRAAWW RGCTVTGTAGCCYWGGCTVD AGCTSHGTARCCYHGKCTDHRAAWW Direction: Forward Position #: 1 Overlap #: 20 Alignment: ABVHSVSHDACCHVGTCTDHRAAWW RGCTVTGTAGCCYWGGCTVD----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C012 Combined Motif Reverse Complement Original Motif WWTTKHHAGYCHKGGMTACHSAGCT MKAGAGMKAGAGAGAGAKM WWTTKHBAGHSHKRGAKASAGAKHT Direction: Forward Position #: 6 Overlap #: 19 Alignment: WWTTKHHAGYCHKGGMTACHSAGCT -----MKAGAGMKAGAGAGAGAKM- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Reverse Complement Original Motif ADYTCTSTYTCKYHSHCTVHRAAWW GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC ADYTCKSYYYCBYCBBCYHBVMMCYSSCCCCCSSC Direction: Forward Position #: 6 Overlap #: 20 Alignment: ADYTCTSTYTCKYHSHCTVHRAAWW---------- -----GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 74 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C074 C005 Original Motif Original Motif CCAGGCWGGCSKS TCTGTAGMCCAGGCTGGCCTYGW TCTGTAGMCCAGGCTGGCCTBGW Direction: Forward Position #: 9 Overlap #: 13 Alignment: --------CCAGGCWGGCSKS-- TCTGTAGMCCAGGCTGGCCTYGW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C122 Original Motif Reverse Complement TCTGTAGMCCAGGCTGGCCTBGW MAGGVSWGSCWGGGCTK MWSKGBAGVCHRGGCTGGCCTBGW Direction: Forward Position #: 2 Overlap #: 16 Alignment: -TCTGTAGMCCAGGCTGGCCTBGW MAGGVSWGSCWGGGCTK------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C109 Original Motif Original Motif MWSKGBAGVCHRGGCTGGCCTBGW RMCWSGCTGSCCKY RMCDBGCWGSCCDGGCTGGCCTBGW Direction: Forward Position #: 2 Overlap #: 13 Alignment: -MWSKGBAGVCHRGGCTGGCCTBGW RMCWSGCTGSCCKY----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C126 Combined Motif Original Motif Original Motif RMCDBGCWGSCCDGGCTGGCCTBGW SVWGRCSMKSCTGGYS RMCDBGVWGVCCVKGCTGGCCTBGW Direction: Forward Position #: 6 Overlap #: 16 Alignment: RMCDBGCWGSCCDGGCTGGCCTBGW -----SVWGRCSMKSCTGGYS---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C096 Original Motif Original Motif RMCDBGVWGVCCVKGCTGGCCTBGW MRMCMYGSCYRGCCYK MRMCHBGSHKRBCHBKCTGGCCTBGW Direction: Forward Position #: 2 Overlap #: 15 Alignment: -RMCDBGVWGVCCVKGCTGGCCTBGW MRMCMYGSCYRGCCYK---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 75 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C075 C061 Original Motif Original Motif MGGCAGMSGCAGSCK MRGMMBAGGCHGGCCK MGGCMGAGGCAGGCBK Direction: Forward Position #: 1 Overlap #: 15 Alignment: MGGCAGMSGCAGSCK- MRGMMBAGGCHGGCCK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C101 Reverse Complement Original Motif RVGCCTGCCTCYGCCY YTSCCTSKSVSTCCCAR HHGCCTGBSHSTSCCHR Direction: Forward Position #: 1 Overlap #: 16 Alignment: RVGCCTGCCTCYGCCY- YTSCCTSKSVSTCCCAR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C105 Reverse Complement Reverse Complement MHGGSASHSBCAGGCHH TVGGRYGGSBRRGGCA HDGGVHGVSBSAGGCAH Direction: Forward Position #: 1 Overlap #: 16 Alignment: MHGGSASHSBCAGGCHH TVGGRYGGSBRRGGCA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C093 Reverse Complement Original Motif HTGCCTSBSVCHVCCHH AKCCASMBSCCKSTGCMT AKSCMBVBSCCBSYSCMT Direction: Forward Position #: 1 Overlap #: 17 Alignment: HTGCCTSBSVCHVCCHH- AKCCASMBSCCKSTGCMT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C012 Combined Motif Original Motif Reverse Complement AKSCMBVBSCCBSYSCMT YRTCTCTCTCTRYCTCTRR AKSYVYCTSYCTCTVYCTCTRR Direction: Forward Position #: 4 Overlap #: 15 Alignment: AKSCMBVBSCCBSYSCMT---- ---YRTCTCTCTCTRYCTCTRR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 76 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C076 C093 Original Motif Original Motif ASCTRCCTCYBCSB AKCCASMBSCCKSTGCMT ASCBGCCKCYGCVTAKCC Direction: Backward Position #: 1 Overlap #: 14 Alignment: ----ASCTRCCTCYBCSB AKCCASMBSCCKSTGCMT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C048 Combined Motif Reverse Complement Original Motif GGYTAVGCMGRGGCVGST SGAGGCWSWGGCAGSC GGBKAGGCWSAGGCAGSB Direction: Forward Position #: 3 Overlap #: 16 Alignment: GGYTAVGCMGRGGCVGST --SGAGGCWSWGGCAGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C054 Combined Motif Reverse Complement Original Motif VSCTGCCTSWGCCTYBCC SSCCDCCCCCCCSS VSCBSCCDCHSCCBCSSC Direction: Forward Position #: 4 Overlap #: 14 Alignment: VSCTGCCTSWGCCTYBCC ---SSCCDCCCCCCCSS- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C075 Reverse Complement Original Motif GSSGVGGSDGDGGSBGSB MGGCAGMSGCAGSCK DGSSAGRSGSAGGCBGSB Direction: Forward Position #: 1 Overlap #: 15 Alignment: GSSGVGGSDGDGGSBGSB MGGCAGMSGCAGSCK--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C085 Combined Motif Reverse Complement Reverse Complement VSCBGCCTSCSMCTSSCH SKCSVHMTCTDBSKCSV VBCBGCCTSYVHCTCSSH Direction: Forward Position #: 1 Overlap #: 17 Alignment: VSCBGCCTSCSMCTSSCH SKCSVHMTCTDBSKCSV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 77 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C077 C022 Original Motif Original Motif SBCCCCGGSSCCCCCB BGCCYCBGSCYCCCSVS SBGCCYCVGSCYCCCCV Direction: Backward Position #: 2 Overlap #: 16 Alignment: SBCCCCGGSSCCCCCB- BGCCYCBGSCYCCCSVS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C140 Original Motif Original Motif SBGCCYCVGSCYCCCCV BSCCBCVSSSBCCYHVG SBSCYCCSSSSCCCHCV Direction: Forward Position #: 1 Overlap #: 17 Alignment: SBGCCYCVGSCYCCCCV BSCCBCVSSSBCCYHVG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C004 Reverse Complement Reverse Complement VGDGGGSSSSGGKGSBS SSSSSSGSGGSSSSGGSSSSSGSSSSS SSGGGGGSGSSGGSGSSSSSSGSSSSS Direction: Forward Position #: 2 Overlap #: 17 Alignment: -VGDGGGSSSSGGKGSBS--------- SSSSSSGSGGSSSSGGSSSSSGSSSSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Original Motif Reverse Complement SSGGGGGSGSSGGSGSSSSSSGSSSSS GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC GSSGGGGGSSGGGGGGBGGSVGGSVGBGSC Direction: Forward Position #: 1 Overlap #: 27 Alignment: SSGGGGGSGSSGGSGSSSSSSGSSSSS--- GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C020 Combined Motif Reverse Complement Original Motif GSCBCVSCCVSCCBCCCCCCSSCCCCCSSC BSCVCCSCCVCSCCCACS GSCBCVSSCVCCSCCCCCCCCVCCCCCSSC Direction: Forward Position #: 7 Overlap #: 18 Alignment: GSCBCVSCCVSCCBCCCCCCSSCCCCCSSC ------BSCVCCSCCVCSCCCACS------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 78 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C078 C025 Original Motif Original Motif YRGAYAGAGRGAYR KMGAKAGAGMGAKM KMGAKAGAGMGAKM Direction: Backward Position #: 1 Overlap #: 14 Alignment: YRGAYAGAGRGAYR KMGAKAGAGMGAKM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C012 Reverse Complement Reverse Complement YRTCYCTCTRTCYR YRTCTCTCTCTRYCTCTRR YRTCTCTCTMTVYMTCTRR Direction: Forward Position #: 1 Overlap #: 14 Alignment: YRTCYCTCTRTCYR----- YRTCTCTCTCTRYCTCTRR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C070 Combined Motif Reverse Complement Original Motif MKAGARMVARAGAGAGAKM GVGABAGAVAGASVK MKAGRGMVAGAGAGAGAKM Direction: Forward Position #: 4 Overlap #: 15 Alignment: MKAGARMVARAGAGAGAKM ---GVGABAGAVAGASVK- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C017 Original Motif Original Motif MKAGRGMVAGAGAGAGAKM WSWGAGASWSAGAGASWS HBAGAGASASAGAGASWBM Direction: Forward Position #: 1 Overlap #: 18 Alignment: MKAGRGMVAGAGAGAGAKM WSWGAGASWSAGAGASWS- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C011 Combined Motif Original Motif Original Motif HBAGAGASASAGAGASWBM KMGAGAKMGAGAGAGAKM HKMGAGAKAGAGAGAGAKM Direction: Forward Position #: 2 Overlap #: 18 Alignment: HBAGAGASASAGAGASWBM -KMGAGAKMGAGAGAGAKM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 79 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C079 C024 Reverse Complement Reverse Complement WKTRTWTTTTWRTTTDT THTTDMWTTTTWKMTTDA TWTTDHWTTTTWDHTTDH Direction: Forward Position #: 2 Overlap #: 17 Alignment: -WKTRTWTTTTWRTTTDT THTTDMWTTTTWKMTTDA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C016 Original Motif Reverse Complement TWTTDHWTTTTWDHTTDH WWTTYTWTYTTWDTTTWTTWH WWTTHTWTTTTWDTTTDTTWH Direction: Forward Position #: 1 Overlap #: 18 Alignment: TWTTDHWTTTTWDHTTDH--- WWTTYTWTYTTWDTTTWTTWH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C097 Combined Motif Original Motif Reverse Complement WWTTHTWTTTTWDTTTDTTWH WVTTSWWTTTTWWSTTBW WHTTBWWTTTTWWBTTDWTWH Direction: Forward Position #: 1 Overlap #: 18 Alignment: WWTTHTWTTTTWDTTTDTTWH WVTTSWWTTTTWWSTTBW--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C001 Combined Motif Original Motif Reverse Complement WHTTBWWTTTTWWBTTDWTWH WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW WHTTHWWTTTTWWHTTTTTTTTTTWWTTTTTWWW Direction: Forward Position #: 5 Overlap #: 17 Alignment: WHTTBWWTTTTWWBTTDWTWH------------- ----WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C030 Reverse Complement Original Motif WWWAAAAAWWAAAAAAAAAAHWWAAAAWWHAAHW WYAAAAAMAAAAAAAAWAM WYAAWAAAAAAAAAAAWAAAAAAHWWAAAAWWHAAHW Direction: Forward Position #: 4 Overlap #: 16 Alignment: ---WWWAAAAAWWAAAAAAAAAAHWWAAAAWWHAAHW WYAAAAAMAAAAAAAAWAM------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 80 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C080 C131 Original Motif Original Motif WWAAVAAMMHAAWW WWAADAARVHAAWW WWAADAAAVHAAWW Direction: Forward Position #: 1 Overlap #: 14 Alignment: WWAAVAAMMHAAWW WWAADAARVHAAWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C016 Original Motif Original Motif WWAADAAAVHAAWW HWAAWAAAHWAAMAWAMAAWW WWAAHAAAHWAAHAWAMAAWW Direction: Forward Position #: 1 Overlap #: 14 Alignment: WWAADAAAVHAAWW------- HWAAWAAAHWAAMAWAMAAWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C030 Combined Motif Original Motif Original Motif WWAAHAAAHWAAHAWAMAAWW WYAAAAAMAAAAAAAAWAM WWHAAAAAMAAAAAAAAAAHW Direction: Forward Position #: 2 Overlap #: 19 Alignment: WWAAHAAAHWAAHAWAMAAWW -WYAAAAAMAAAAAAAAWAM- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C098 Combined Motif Original Motif Original Motif WWHAAAAAMAAAAAAAAAAHW AAAAWWAMAAWWAAWH WWHAAAAAHAAAAAWAAAWHW Direction: Forward Position #: 5 Overlap #: 16 Alignment: WWHAAAAAMAAAAAAAAAAHW ----AAAAWWAMAAWWAAWH- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C001 Combined Motif Reverse Complement Reverse Complement WHWTTTWTTTTTHTTTTTHWW WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW WHWTTWHTTTTTWTTTTTWTTTTTWWTTTTTWWW Direction: Forward Position #: 5 Overlap #: 17 Alignment: WHWTTTWTTTTTHTTTTTHWW------------- ----WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 81 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C081 C054 Original Motif Original Motif BCCSHCCCSCMG SSCCDCCCCCCCSS SSCCVHCCCCCMSS Direction: Forward Position #: 2 Overlap #: 12 Alignment: -BCCSHCCCSCMG- SSCCDCCCCCCCSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Reverse Complement Reverse Complement SSRGGGGGDVGGSS GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC GSVGGGGGVVGGGGGGKGGVMGGSHGKGSC Direction: Forward Position #: 1 Overlap #: 14 Alignment: SSRGGGGGDVGGSS---------------- GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C059 Combined Motif Original Motif Reverse Complement GSVGGGGGVVGGGGGGKGGVMGGSHGKGSC CMGGGGGDGGKS GSSVGGGGGBGGGSGGKGGVMGGSHGKGSC Direction: Forward Position #: 3 Overlap #: 12 Alignment: GSVGGGGGVVGGGGGGKGGVMGGSHGKGSC --CMGGGGGDGGKS---------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C023 Combined Motif Original Motif Reverse Complement GSSVGGGGGBGGGSGGKGGVMGGSHGKGSC SSGGSGDBGSGGSS GSSVGGGGSDGGGSGGSGGVMGGSHGKGSC Direction: Forward Position #: 5 Overlap #: 14 Alignment: GSSVGGGGGBGGGSGGKGGVMGGSHGKGSC ----SSGGSGDBGSGGSS------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C008 Original Motif Reverse Complement GSSVGGGGSDGGGSGGSGGVMGGSHGKGSC SSGGSSGGGGSSGGSS SSGGSSGGGGSBGGSSGGSGGVMGGSHGKGSC Direction: Forward Position #: 3 Overlap #: 14 Alignment: --GSSVGGGGSDGGGSGGSGGVMGGSHGKGSC SSGGSSGGGGSSGGSS---------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 82 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C082 C056 Reverse Complement Reverse Complement WTTKTTTMTTTYW HWTTYTKWMTTTYWT HWTTTTTTMTTTYWT Direction: Forward Position #: 2 Overlap #: 13 Alignment: -WTTKTTTMTTTYW- HWTTYTKWMTTTYWT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C030 Combined Motif Reverse Complement Original Motif AWMAAARAAAAAAWH WYAAAAAMAAAAAAAAWAM AWHAAARAAAAAAWHAAAWAM Direction: Forward Position #: 3 Overlap #: 13 Alignment: AWMAAARAAAAAAWH------ --WYAAAAAMAAAAAAAAWAM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C010 Original Motif Original Motif AWHAAARAAAAAAWHAAAWAM WWWAAAAWWAAAAAAAAAAWW WWWAAAAWWAAAAAAAAAWWH Direction: Forward Position #: 1 Overlap #: 21 Alignment: AWHAAARAAAAAAWHAAAWAM WWWAAAAWWAAAAAAAAAAWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C001 Combined Motif Reverse Complement Reverse Complement HWWTTTTTTTTTWWTTTTWWW WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW HWWTWTTTTTTTWWTTTTWTTTTTWWTTTTTWWW Direction: Forward Position #: 5 Overlap #: 17 Alignment: HWWTTTTTTTTTWWTTTTWWW------------- ----WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C152 Combined Motif Original Motif Reverse Complement HWWTWTTTTTTTWWTTTTWTTTTTWWTTTTTWWW YWTKYWTKTKWYKKWR HWWTWTYTTTTTTTTTTYTTTTTTWWTTTTTWWW Direction: Forward Position #: 7 Overlap #: 16 Alignment: HWWTWTTTTTTTWWTTTTWTTTTTWWTTTTTWWW ------YWTKYWTKTKWYKKWR------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 83 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C083 C050 Original Motif Original Motif CKBCCTSYRSCTCMMG CBGCCKCYSCCTCYMG CDGCCTCYGCCTCCMG Direction: Backward Position #: 1 Overlap #: 16 Alignment: CKBCCTSYRSCTCMMG CBGCCKCYSCCTCYMG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C101 Combined Motif Reverse Complement Reverse Complement CYGGAGGCMGAGGCDG MTGGGASVSYSAGGSAK CYGVWGGSASRGBSAGGSAK Direction: Forward Position #: 4 Overlap #: 13 Alignment: CYGGAGGCMGAGGCDG---- ---MTGGGASVSYSAGGSAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C086 Original Motif Original Motif CYGVWGGSASRGBSAGGSAK CSGGAGKCWGMGGSASG CBGSAGKCAGMGGSAGGSAK Direction: Forward Position #: 1 Overlap #: 17 Alignment: CYGVWGGSASRGBSAGGSAK CSGGAGKCWGMGGSASG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C014 Original Motif Original Motif CBGSAGKCAGMGGSAGGSAK YSGGAGGCAGAGGCMS CBGGAGGCAGAGGCMGGSAK Direction: Forward Position #: 1 Overlap #: 16 Alignment: CBGSAGKCAGMGGSAGGSAK YSGGAGGCAGAGGCMS---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C012 Original Motif Original Motif CBGGAGGCAGAGGCMGGSAK MKAGAGMKAGAGAGAGAKM CBRGAGVBAGAGRSAGRBAK Direction: Forward Position #: 1 Overlap #: 19 Alignment: CBGGAGGCAGAGGCMGGSAK MKAGAGMKAGAGAGAGAKM- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 84 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C084 C076 Original Motif Original Motif SCTGCMKCTGCVB ASCTRCCTCYBCSB SCTGCCKCYGCSBA Direction: Backward Position #: 1 Overlap #: 13 Alignment: -SCTGCMKCTGCVB ASCTRCCTCYBCSB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C075 Original Motif Reverse Complement SCTGCCKCYGCSBA YGSCTGCSYCTGCCY YGSCTGCCTCTGCCHA Direction: Forward Position #: 3 Overlap #: 13 Alignment: --SCTGCCKCYGCSBA YGSCTGCSYCTGCCY- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C118 Combined Motif Reverse Complement Original Motif THGGCAGAGGCAGSCK GMCTGCSWSTGCCKC THGVCWGMSDCWGCCKC Direction: Forward Position #: 3 Overlap #: 14 Alignment: THGGCAGAGGCAGSCK- --GMCTGCSWSTGCCKC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C106 Reverse Complement Reverse Complement GRGGCWGHSRCWGVCHA RSTGCCWCTGCSY RSDGSCWSHGSCHGVCHA Direction: Forward Position #: 2 Overlap #: 12 Alignment: -GRGGCWGHSRCWGVCHA RSTGCCWCTGCSY----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C060 Original Motif Reverse Complement RSDGSCWSHGSCHGVCHA SYTGCCYYTGCCYS VBTGCCYCTGCCYSVCHA Direction: Forward Position #: 1 Overlap #: 14 Alignment: RSDGSCWSHGSCHGVCHA SYTGCCYYTGCCYS---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 85 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C085 C012 Reverse Complement Reverse Complement SKCSVHMTCTDBSKCSV YRTCTCTCTCTRYCTCTRR RVTCBBYCTCTRYCTCBRY Direction: Backward Position #: 2 Overlap #: 17 Alignment: -SKCSVHMTCTDBSKCSV- YRTCTCTCTCTRYCTCTRR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C037 Combined Motif Original Motif Original Motif RVTCBBYCTCTRYCTCBRY SVCCGBCMCCSYCMCCVB RSBCBVBCHCHRYCHCCVY Direction: Forward Position #: 2 Overlap #: 18 Alignment: RVTCBBYCTCTRYCTCBRY -SVCCGBCMCCSYCMCCVB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C004 Combined Motif Original Motif Original Motif RSBCBVBCHCHRYCHCCVY SSSSSCSSSSSCCSSSSCCSCSSSSSS RSBCSSSCBCBSCCBCSSSSCCSCSSSSSS Direction: Forward Position #: 4 Overlap #: 16 Alignment: RSBCBVBCHCHRYCHCCVY----------- ---SSSSSCSSSSSCCSSSSCCSCSSSSSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C034 Combined Motif Original Motif Reverse Complement RSBCSSSCBCBSCCBCSSSSCCSCSSSSSS SCTCTRSCTCCSCAGTGS RSBCSSCYCYVSCYCCSSVGHSSCSSSSSS Direction: Forward Position #: 6 Overlap #: 18 Alignment: RSBCSSSCBCBSCCBCSSSSCCSCSSSSSS -----SCTCTRSCTCCSCAGTGS------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C011 Original Motif Reverse Complement RSBCSSCYCYVSCYCCSSVGHSSCSSSSSS RRTCTCTCTCRRTCTCRR RRTCYSBCYCRVYCYCVVVGHSSCSSSSSS Direction: Forward Position #: 1 Overlap #: 18 Alignment: RSBCSSCYCYVSCYCCSSVGHSSCSSSSSS RRTCTCTCTCRRTCTCRR------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 86 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C086 C037 Reverse Complement Original Motif CSTSCCYCWGRCTCCSG SVCCGBCMCCSYCMCCVB SVYCSCCCCSRCYMCCGB Direction: Forward Position #: 1 Overlap #: 17 Alignment: CSTSCCYCWGRCTCCSG- SVCCGBCMCCSYCMCCVB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C107 Combined Motif Original Motif Original Motif SVYCSCCCCSRCYMCCGB CHBBCCTYBAABCCCDG SVYCVCYCCBBBHMCCSCDG Direction: Forward Position #: 4 Overlap #: 15 Alignment: SVYCSCCCCSRCYMCCGB-- ---CHBBCCTYBAABCCCDG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Original Motif Original Motif SVYCVCYCCBBBHMCCSCDG GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC SSCCCBBCCBDCCHCCCCCSSSCCCCCSSC Direction: Forward Position #: 1 Overlap #: 20 Alignment: SVYCVCYCCBBBHMCCSCDG---------- GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C004 Combined Motif Original Motif Original Motif SSCCCBBCCBDCCHCCCCCSSSCCCCCSSC SSSSSCSSSSSCCSSSSCCSCSSSSSS SSCCCBSCCBSCCSCCSCCSSSCCCCCSSCSSS Direction: Forward Position #: 7 Overlap #: 24 Alignment: SSCCCBBCCBDCCHCCCCCSSSCCCCCSSC--- ------SSSSSCSSSSSCCSSSSCCSCSSSSSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C017 Combined Motif Reverse Complement Original Motif SSSGSSGGGGGSSSGGSGGSGGSBGGSBGGGSS WSWGAGASWSAGAGASWS SSSGSSGDGDGRGVGDSRGRGRSDSGSBGGGSS Direction: Forward Position #: 8 Overlap #: 18 Alignment: SSSGSSGGGGGSSSGGSGGSGGSBGGSBGGGSS -------WSWGAGASWSAGAGASWS-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 87 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C087 C005 Original Motif Original Motif WRGACCRSSYTGGCYW TCTGTAGMCCAGGCTGGCCTYGW TCTGTAGMCCAGGCTGGCCTYGW Direction: Forward Position #: 5 Overlap #: 16 Alignment: ----WRGACCRSSYTGGCYW--- TCTGTAGMCCAGGCTGGCCTYGW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C122 Original Motif Reverse Complement TCTGTAGMCCAGGCTGGCCTYGW MAGGVSWGSCWGGGCTK MWSKGBAGVCHRGGCTGGCCTYGW Direction: Forward Position #: 2 Overlap #: 16 Alignment: -TCTGTAGMCCAGGCTGGCCTYGW MAGGVSWGSCWGGGCTK------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C061 Combined Motif Original Motif Original Motif MWSKGBAGVCHRGGCTGGCCTYGW MRGMMBAGGCHGGCCK MWSKGHRGMCBRGGCTGGCCTYGW Direction: Forward Position #: 6 Overlap #: 16 Alignment: MWSKGBAGVCHRGGCTGGCCTYGW -----MRGMMBAGGCHGGCCK--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C073 Combined Motif Original Motif Original Motif MWSKGHRGMCBRGGCTGGCCTYGW YMWGSMYAGCCRKSKCTR MWSKBMDGVCHAGSCDGGBCTVGW Direction: Forward Position #: 5 Overlap #: 18 Alignment: MWSKGHRGMCBRGGCTGGCCTYGW ----YMWGSMYAGCCRKSKCTR-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C124 Combined Motif Reverse Complement Original Motif WCVAGBCCDGSCTDGVCDYBYSWR WSACSRSGCTGSYSTCSW WCVADSMCVGSSYTGSCBTCBHWR Direction: Forward Position #: 5 Overlap #: 18 Alignment: WCVAGBCCDGSCTDGVCDYBYSWR ----WSACSRSGCTGSYSTCSW-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 88 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C088 C013 Original Motif Original Motif SKCACTCWGTAGAMS WVCTGGAACTCACTHTGTAGACCAGGM WVCTGGAACTCACTCTGTAGACCAGGM Direction: Forward Position #: 9 Overlap #: 15 Alignment: --------SKCACTCWGTAGAMS---- WVCTGGAACTCACTHTGTAGACCAGGM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C089 Combined Motif Reverse Complement Reverse Complement YCCTGGTCTACAGAGTGAGTTCCAGVW MRGKCTDMKYAGTGRK YCCTRGTCTACDBAGTGRGTTCCAGVW Direction: Forward Position #: 4 Overlap #: 16 Alignment: YCCTGGTCTACAGAGTGAGTTCCAGVW ---MRGKCTDMKYAGTGRK-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C017 Reverse Complement Reverse Complement WVCTGGAACKCACTVDGTAGACMAGGM SWSTCTCTSWSTCTCWSW VHCTSKMWCTCWCTVWGWAGACMAGGM Direction: Forward Position #: 1 Overlap #: 18 Alignment: WVCTGGAACKCACTVDGTAGACMAGGM SWSTCTCTSWSTCTCWSW--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C019 Original Motif Reverse Complement VHCTSKMWCTCWCTVWGWAGACMAGGM CTGCCTCCCAAGTGCTGGGMWR CTBCCTCBMDMKYDCTSKGHAGACMAGGM Direction: Forward Position #: 3 Overlap #: 20 Alignment: --VHCTSKMWCTCWCTVWGWAGACMAGGM CTGCCTCCCAAGTGCTGGGMWR------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C086 Combined Motif Original Motif Original Motif CTBCCTCBMDMKYDCTSKGHAGACMAGGM CSGGAGKCWGMGGSASG CTBCCTCSVVAGBBCKVGGVAGRCMAGGM Direction: Forward Position #: 7 Overlap #: 17 Alignment: CTBCCTCBMDMKYDCTSKGHAGACMAGGM ------CSGGAGKCWGMGGSASG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 89 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C089 C013 Original Motif Original Motif YKCACTMYRDAGRCMR WVCTGGAACTCACTHTGTAGACCAGGM WVCTGGAACTCACTHTGTAGACCAGGM Direction: Forward Position #: 9 Overlap #: 16 Alignment: --------YKCACTMYRDAGRCMR--- WVCTGGAACTCACTHTGTAGACCAGGM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C019 Original Motif Original Motif WVCTGGAACTCACTHTGTAGACCAGGM MWYCCCAGCACTTGGGAGGCAG MWHCCYRGMACTCRSKAKGYAGACCAGGM Direction: Forward Position #: 3 Overlap #: 20 Alignment: --WVCTGGAACTCACTHTGTAGACCAGGM MWYCCCAGCACTTGGGAGGCAG------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C083 Combined Motif Original Motif Reverse Complement MWHCCYRGMACTCRSKAKGYAGACCAGGM CYRGAGSMKSAGGBRG MWHCCYVGVRMKSVBBAGGBAGACCAGGM Direction: Forward Position #: 7 Overlap #: 16 Alignment: MWHCCYRGMACTCRSKAKGYAGACCAGGM ------CYRGAGSMKSAGGBRG------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C007 Combined Motif Reverse Complement Original Motif YCCTGGTCTBCCTBBBSRRKBCBMGGHWR KTTSTGAGTTCVAGGMCAGCCTS YCCTGGKYTBYSWGTTCVAGGHCAGSCWV Direction: Forward Position #: 7 Overlap #: 23 Alignment: YCCTGGTCTBCCTBBBSRRKBCBMGGHWR ------KTTSTGAGTTCVAGGMCAGCCTS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C087 Reverse Complement Original Motif VWGSCTGDCCTBGAACWSMBAKRCCAGGM WRGACCRSSYTGGCYW HRGVCYRSSYTGGMHHWSMBAKRCCAGGM Direction: Forward Position #: 1 Overlap #: 16 Alignment: VWGSCTGDCCTBGAACWSMBAKRCCAGGM WRGACCRSSYTGGCYW------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 90 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C090 C098 Original Motif Original Motif WAAWWAAADWWWAW AAAAWWAMAAWWAAWH HWAAWWAAAAWWAAWA Direction: Backward Position #: 2 Overlap #: 14 Alignment: -WAAWWAAADWWWAW- AAAAWWAMAAWWAAWH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C043 Reverse Complement Reverse Complement TWTTWWTTTTWWTTWH WATTMTTTTTTWTTWW WWTTHWTTTTWWTTWW Direction: Forward Position #: 1 Overlap #: 16 Alignment: TWTTWWTTTTWWTTWH WATTMTTTTTTWTTWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C030 Reverse Complement Original Motif WWAAWWAAAAWHAAWW WYAAAAAMAAAAAAAAWAM WHAAWAAAAAADAAWAWAM Direction: Forward Position #: 1 Overlap #: 16 Alignment: WWAAWWAAAAWHAAWW--- WYAAAAAMAAAAAAAAWAM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C001 Combined Motif Reverse Complement Reverse Complement YTWTWTTDTTTTTTWTTHW WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW YTWWWTTTTTTTTTTTTWTTTTTWWTTTTTWWW Direction: Forward Position #: 4 Overlap #: 16 Alignment: YTWTWTTDTTTTTTWTTHW-------------- ---WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C152 Combined Motif Original Motif Reverse Complement YTWWWTTTTTTTTTTTTWTTTTTWWTTTTTWWW YWTKYWTKTKWYKKWR YTWWWTTWTTTWTTTTTYTTTTTWWTTTTTWWW Direction: Forward Position #: 7 Overlap #: 16 Alignment: YTWWWTTTTTTTTTTTTWTTTTTWWTTTTTWWW ------YWTKYWTKTKWYKKWR----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 91 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C091 C013 Original Motif Original Motif KMACTCAMKYTGTAKM WVCTGGAACTCACTHTGTAGACCAGGM WVCTGGAACTCACTYTGTAGACCAGGM Direction: Forward Position #: 6 Overlap #: 16 Alignment: -----KMACTCAMKYTGTAKM------ WVCTGGAACTCACTHTGTAGACCAGGM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C047 Combined Motif Original Motif Original Motif WVCTGGAACTCACTYTGTAGACCAGGM TSGAAMTCACTMKGTASA WVCTGGAACTCACTHTGTAGACCAGGM Direction: Forward Position #: 4 Overlap #: 18 Alignment: WVCTGGAACTCACTYTGTAGACCAGGM ---TSGAAMTCACTMKGTASA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C012 Original Motif Reverse Complement WVCTGGAACTCACTHTGTAGACCAGGM YRTCTCTCTCTRYCTCTRR YDBCTSKMWCTVHCTCTGDAGACCAGGM Direction: Forward Position #: 2 Overlap #: 18 Alignment: -WVCTGGAACTCACTHTGTAGACCAGGM YRTCTCTCTCTRYCTCTRR--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C016 Combined Motif Reverse Complement Original Motif YCCTGGTCTDCAGAGHVAGWRYSAGVDM HWAAWAAAHWAAMAWAMAAWW YCCTGGTHWAMADAVWVAVADHVARVWM Direction: Forward Position #: 7 Overlap #: 21 Alignment: YCCTGGTCTDCAGAGHVAGWRYSAGVDM ------HWAAWAAAHWAAMAWAMAAWW- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C129 Combined Motif Original Motif Original Motif YCCTGGTHWAMADAVWVAVADHVARVWM KKGCTAYRYRGAGAMM YCBTGSTAYRYAGAGAMAVADHVARVWM Direction: Forward Position #: 3 Overlap #: 16 Alignment: YCCTGGTHWAMADAVWVAVADHVARVWM --KKGCTAYRYRGAGAMM---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 92 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C092 C128 Reverse Complement Reverse Complement KKTCGMSGCCASKCTGMM SKTCSMSGACASKSAGMS BKTCGMSGMCASKCWGMM Direction: Backward Position #: 1 Overlap #: 18 Alignment: KKTCGMSGCCASKCTGMM SKTCSMSGACASKSAGMS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C095 Reverse Complement Original Motif RYCWGRSTGYCSYCGARB KCCAKMSTGGTSKMCAGM DYCAGASTGBYSBCSARH Direction: Forward Position #: 1 Overlap #: 18 Alignment: RYCWGRSTGYCSYCGARB KCCAKMSTGGTSKMCAGM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C005 Reverse Complement Original Motif DMTSGVSKBCASTCTGKH TCTGTAGMCCAGGCTGGCCTYGW BCTGKAGVCCAGGCTGGCCTYGW Direction: Forward Position #: 1 Overlap #: 18 Alignment: DMTSGVSKBCASTCTGKH----- TCTGTAGMCCAGGCTGGCCTYGW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C124 Combined Motif Reverse Complement Reverse Complement WCKAGGCCAGCCTGGVCTRCAGV WSGASKSCAGCSMSGTSW WCGAGKCCAGCSHGGHSTRCAGV Direction: Forward Position #: 1 Overlap #: 18 Alignment: WCKAGGCCAGCCTGGVCTRCAGV WSGASKSCAGCSMSGTSW----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C013 Reverse Complement Original Motif BCTGKASHCCHSGCTGGYCTCGW WVCTGGAACTCACTHTGTAGACCAGGM WBCTGGARCYCASKCTGKMSWCSAGGM Direction: Forward Position #: 2 Overlap #: 23 Alignment: -BCTGKASHCCHSGCTGGYCTCGW--- WVCTGGAACTCACTHTGTAGACCAGGM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 93 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C093 C004 Original Motif Original Motif AKCCASMBSCCKSTGCMT SSSSSCSSSSSCCSSSSCCSCSSSSSS CSSSSSSVBSCVSCBSCCGSBSCCBSS Direction: Backward Position #: 8 Overlap #: 18 Alignment: --AKCCASMBSCCKSTGCMT------- SSSSSCSSSSSCCSSSSCCSCSSSSSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Original Motif Original Motif CSSSSSSVBSCVSCBSCCGSBSCCBSS GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC CSSSSGSMYCCVSCBSCCBCBSCCYSSCCCCCSSC Direction: Forward Position #: 6 Overlap #: 22 Alignment: CSSSSSSVBSCVSCBSCCGSBSCCBSS-------- -----GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C036 Original Motif Reverse Complement CSSSSGSMYCCVSCBSCCBCBSCCYSSCCCCCSSC RRCTRRRTCTCRRRCTRY RSCBVVRBCTCVVVCTRCCBCBSCCYSSCCCCCSSC Direction: Forward Position #: 2 Overlap #: 17 Alignment: -CSSSSGSMYCCVSCBSCCBCBSCCYSSCCCCCSSC RRCTRRRTCTCRRRCTRY------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C037 Combined Motif Reverse Complement Reverse Complement GSSGGGGGSSKGGSBGBGGMAGVVVGAGBMVVVGSK BVGGYGKSGGYGBCGGVS GSSGGGGGGGBGGSGGBGKMRGVVVGAGBMVVVGSK Direction: Forward Position #: 7 Overlap #: 18 Alignment: GSSGGGGGSSKGGSBGBGGMAGVVVGAGBMVVVGSK ------BVGGYGKSGGYGBCGGVS------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C073 Combined Motif Reverse Complement Original Motif RSCBVVRBCTCVVVCMRYCBCCSCCVCCCCCCCSSC YMWGSMYAGCCRKSKCTR RSCBVBVDSBCHRGCCRBCKCBVCCVCCCCCCCSSC Direction: Forward Position #: 6 Overlap #: 18 Alignment: RSCBVVRBCTCVVVCMRYCBCCSCCVCCCCCCCSSC -----YMWGSMYAGCCRKSKCTR------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 94 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C094 C102 Original Motif Original Motif SSHCCCSGCCCCSG SCMCCSSSVCCMSS SCMCCCSSMCCCSS Direction: Forward Position #: 1 Overlap #: 14 Alignment: SSHCCCSGCCCCSG SCMCCSSSVCCMSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Reverse Complement Reverse Complement SSGGGRSSGGGRGS GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC GSGGGGGGGGGGGGGGKGGVMGGSHGKGSC Direction: Forward Position #: 1 Overlap #: 14 Alignment: SSGGGRSSGGGRGS---------------- GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C004 Original Motif Reverse Complement GSGGGGGGGGGGGGGGKGGVMGGSHGKGSC SSSSSSGSGGSSSSGGSSSSSGSSSSS SSSSSGGGGGSSGGGGSGGSGGSVGGSHGKGSC Direction: Forward Position #: 4 Overlap #: 24 Alignment: ---GSGGGGGGGGGGGGGGKGGVMGGSHGKGSC SSSSSSGSGGSSSSGGSSSSSGSSSSS------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C023 Original Motif Reverse Complement SSSSSGGGGGSSGGGGSGGSGGSVGGSHGKGSC SSGGSGDBGSGGSS SSGGSGGGGGGGSSGGGSGGSGGSVGGSHGKGSC Direction: Forward Position #: 2 Overlap #: 13 Alignment: -SSSSSGGGGGSSGGGGSGGSGGSVGGSHGKGSC SSGGSGDBGSGGSS-------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C077 Combined Motif Original Motif Reverse Complement SSGGSGGGGGGGSSGGGSGGSGGSVGGSHGKGSC BGGGGGSSCCGGGGBS SSGGSGGGGGGGSSSGGGGBSGGSVGGSHGKGSC Direction: Forward Position #: 6 Overlap #: 16 Alignment: SSGGSGGGGGGGSSGGGSGGSGGSVGGSHGKGSC -----BGGGGGSSCCGGGGBS------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 95 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C095 C005 Reverse Complement Original Motif RCTGYYSACCASYYTGGY TCTGTAGMCCAGGCTGGCCTYGW ASTSCHGRCYRGCCTSGHTCTGT Direction: Backward Position #: 1 Overlap #: 18 Alignment: -----RCTGYYSACCASYYTGGY TCTGTAGMCCAGGCTGGCCTYGW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C092 Original Motif Reverse Complement ASTSCHGRCYRGCCTSGHTCTGT KKTCGMSGCCASKCTGMM DBTSBMSGCCASBCTGVHTCTGT Direction: Forward Position #: 1 Overlap #: 18 Alignment: ASTSCHGRCYRGCCTSGHTCTGT KKTCGMSGCCASKCTGMM----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C013 Original Motif Original Motif DBTSBMSGCCASBCTGVHTCTGT WVCTGGAACTCACTHTGTAGACCAGGM WVCTGGAACTCACTHTGTAGWCCAGGCCASBCTGVHTCTGT Direction: Forward Position #: 19 Overlap #: 9 Alignment: ------------------DBTSBMSGCCASBCTGVHTCTGT WVCTGGAACTCACTHTGTAGACCAGGM-------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C128 Reverse Complement Reverse Complement ACAGADVCAGVSTGGCCTGGWCTACADAGTGAGTTCCAGVW SKTCSMSGACASKSAGMS SKWCVVVGACAGDSWGVCCTGGWCTACADAGTGAGTTCCAGVW Direction: Forward Position #: 3 Overlap #: 16 Alignment: --ACAGADVCAGVSTGGCCTGGWCTACADAGTGAGTTCCAGVW SKTCSMSGACASKSAGMS------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C040 Combined Motif Original Motif Reverse Complement SKWCVVVGACAGDSWGVCCTGGWCTACADAGTGAGTTCCAGVW KCTGMSKTYGAMSTCASM SKWCVVVSHSASKBHGAMSTSRBCTACADAGTGAGTTCCAGVW Direction: Forward Position #: 7 Overlap #: 18 Alignment: SKWCVVVGACAGDSWGVCCTGGWCTACADAGTGAGTTCCAGVW ------KCTGMSKTYGAMSTCASM------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 96 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C096 C121 Original Motif Original Motif MRMCMYGSCYRGCCYK MRCCCTRGCYSTCCYK MRCCCTRGCYVKCCYK Direction: Backward Position #: 1 Overlap #: 16 Alignment: MRMCMYGSCYRGCCYK MRCCCTRGCYSTCCYK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C073 Original Motif Reverse Complement MRCCCTRGCYVKCCYK KAGYSYKGGCTKRSCWYK BRSCCYKGSCBKVCCKYK Direction: Forward Position #: 1 Overlap #: 16 Alignment: MRCCCTRGCYVKCCYK-- KAGYSYKGGCTKRSCWYK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C005 Reverse Complement Reverse Complement YMRGGVRVGSCYMGGSKB WCKAGGCCAGCCTGGYCTACAGA WCVAGGCVAGCCTVGKCTACAGA Direction: Forward Position #: 2 Overlap #: 18 Alignment: -YMRGGVRVGSCYMGGSKB---- WCKAGGCCAGCCTGGYCTACAGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C061 Reverse Complement Reverse Complement TCTGTAGYCVAGGCTVGCCTBGW RGGCCDGCCTBRRCMY DBKSYRGCCBHGGCHBGCCTBGW Direction: Forward Position #: 1 Overlap #: 16 Alignment: TCTGTAGYCVAGGCTVGCCTBGW RGGCCDGCCTBRRCMY------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Reverse Complement Reverse Complement WCVAGGCVHGCCHVGGCKKSRBD GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC WCVAGGSVVGSSBVGGSKKSDGDVMGGSHGKGSC Direction: Forward Position #: 5 Overlap #: 19 Alignment: WCVAGGCVHGCCHVGGCKKSRBD----------- ----GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 97 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C097 C024 Reverse Complement Reverse Complement WVTTSWWTTTTWWSTTBW THTTDMWTTTTWKMTTDA WHTTBWWTTTTWWVTTDW Direction: Backward Position #: 1 Overlap #: 18 Alignment: WVTTSWWTTTTWWSTTBW THTTDMWTTTTWKMTTDA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C001 Combined Motif Original Motif Reverse Complement WHTTBWWTTTTWWVTTDW WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW WHTTDHTTTTTWWHTTTWTTTTTWWTTTTTWWW Direction: Forward Position #: 4 Overlap #: 15 Alignment: WHTTBWWTTTTWWVTTDW--------------- ---WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C030 Combined Motif Original Motif Reverse Complement WHTTDHTTTTTWWHTTTWTTTTTWWTTTTTWWW YTWTTTTTTTTYTTTTTMW WHTTDHTTTTTTTTTTTHTTTTTWWTTTTTWWW Direction: Forward Position #: 7 Overlap #: 19 Alignment: WHTTDHTTTTTWWHTTTWTTTTTWWTTTTTWWW ------YTWTTTTTTTTYTTTTTMW-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C016 Combined Motif Reverse Complement Original Motif WWWAAAAAWWAAAAAHAAAAAAAAAAAHDAAHW HWAAWAAAHWAAMAWAMAAWW WWWAAAAWWAAAAAAHAAAMAWAAAAAWDAAHW Direction: Forward Position #: 8 Overlap #: 21 Alignment: WWWAAAAAWWAAAAAHAAAAAAAAAAAHDAAHW -------HWAAWAAAHWAAMAWAMAAWW----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C010 Original Motif Original Motif WWWAAAAWWAAAAAAHAAAMAWAAAAAWDAAHW WWWAAAAWWAAAAAAAAAAWW WWWAAAAWWAAAAAAAHAAAHAWAAAAAWDAAHW Direction: Forward Position #: 2 Overlap #: 20 Alignment: -WWWAAAAWWAAAAAAHAAAMAWAAAAAWDAAHW WWWAAAAWWAAAAAAAAAAWW------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 98 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C098 C030 Reverse Complement Reverse Complement HWTTWWTTYTWWTTTT YTWTTTTTTTTYTTTTTMW YTWTTTTWHTTYTTWTTHW Direction: Forward Position #: 4 Overlap #: 16 Alignment: ---HWTTWWTTYTWWTTTT YTWTTTTTTTTYTTTTTMW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C001 Combined Motif Original Motif Reverse Complement YTWTTTTWHTTYTTWTTHW WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW YTWWWYTTTTTTTTTTTWTTTTTWWTTTTTWWW Direction: Forward Position #: 4 Overlap #: 16 Alignment: YTWTTTTWHTTYTTWTTHW-------------- ---WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C043 Combined Motif Reverse Complement Original Motif WWWAAAAAWWAAAAAWAAAAAAAAAAAMWWWAM WWAAWAAAAAARAATW WWWAAAAAAWAAAAAWRAAWWAAAAAAMWWWAM Direction: Forward Position #: 6 Overlap #: 16 Alignment: WWWAAAAAWWAAAAAWAAAAAAAAAAAMWWWAM -----WWAAWAAAAAARAATW------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C033 Combined Motif Original Motif Original Motif WWWAAAAAAWAAAAAWRAAWWAAAAAAMWWWAM WWAAWYAAAMRWAAAW WWWAAWWAAWHAAAARAAAWWAAAAAAMWWWAM Direction: Forward Position #: 6 Overlap #: 16 Alignment: WWWAAAAAAWAAAAAWRAAWWAAAAAAMWWWAM -----WWAAWYAAAMRWAAAW------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C057 Reverse Complement Reverse Complement YTWWWYTTTTTTWWTTTKTTTTHWTTWWTTWWW HWTRTTMKTYTTMKTYKW HWTDTWHTTTTTHTTTTTTTKTTTTHWTTWWTTWWW Direction: Forward Position #: 4 Overlap #: 15 Alignment: ---YTWWWYTTTTTTWWTTTKTTTTHWTTWWTTWWW HWTRTTMKTYTTMKTYKW------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 99 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C099 C019 Original Motif Original Motif MYCCCMGCACTCKGGARK MWYCCCAGCACTTGGGAGGCAG MHYCCCAGCACTYKGGAGGCAG Direction: Forward Position #: 2 Overlap #: 18 Alignment: -MYCCCMGCACTCKGGARK--- MWYCCCAGCACTTGGGAGGCAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C015 Original Motif Original Motif MHYCCCAGCACTYKGGAGGCAG DVAGCCWKGGCTACAVAGCK HHHSCCAGSRCTHBRGAGBBAG Direction: Forward Position #: 1 Overlap #: 20 Alignment: MHYCCCAGCACTYKGGAGGCAG DVAGCCWKGGCTACAVAGCK-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C047 Combined Motif Original Motif Original Motif HHHSCCAGSRCTHBRGAGBBAG TSGAAMTCACTMKGTASA HTVGMMMKCACTMBGKAGABAG Direction: Forward Position #: 2 Overlap #: 18 Alignment: HHHSCCAGSRCTHBRGAGBBAG -TSGAAMTCACTMKGTASA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C035 Reverse Complement Reverse Complement CTBTCTRCBYAGTGYYRYCVAH WWTTTMYAGACRKGGTWW WCTTTCTASHCAGKGHHDYCVAH Direction: Forward Position #: 2 Overlap #: 17 Alignment: -CTBTCTRCBYAGTGYYRYCVAH WWTTTMYAGACRKGGTWW----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C128 Combined Motif Reverse Complement Original Motif HTVGMDHHCRCTGHSTAGAAAGW SYCTSRSTGTCSYSGARS HTVGVBCWCRCTGTCBHSRAAVW Direction: Forward Position #: 5 Overlap #: 18 Alignment: HTVGMDHHCRCTGHSTAGAAAGW ----SYCTSRSTGTCSYSGARS- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 100 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C100 C027 Reverse Complement Reverse Complement WHGASACAGSGWDW WHKAGACAGGGTTTCMCTGKY WHGAGACAGGGTTTCMCTGKY Direction: Forward Position #: 1 Overlap #: 14 Alignment: WHGASACAGSGWDW------- WHKAGACAGGGTTTCMCTGKY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C035 Combined Motif Original Motif Reverse Complement WHGAGACAGGGTTTCMCTGKY WWTTTMYAGACRKGGTWW WHGAGACAGGGTTTCMHTKTHYAGACRKGGTWW Direction: Forward Position #: 16 Overlap #: 6 Alignment: WHGAGACAGGGTTTCMCTGKY------------ ---------------WWTTTMYAGACRKGGTWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C078 Original Motif Original Motif WHGAGACAGGGTTTCMHTKTHYAGACRKGGTWW YRGAYAGAGRGAYR HVGABASAGVGWTDCMHTKTHYAGACRKGGTWW Direction: Forward Position #: 1 Overlap #: 14 Alignment: WHGAGACAGGGTTTCMHTKTHYAGACRKGGTWW YRGAYAGAGRGAYR------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C012 Reverse Complement Reverse Complement WWACCYKGTCTMDARADYGDAWCVCTSTBTCBH YRTCTCTCTCTRYCTCTRR HRDCYCTSTCTVBMDMDDGDAWCVCTSTBTCBH Direction: Forward Position #: 1 Overlap #: 19 Alignment: WWACCYKGTCTMDARADYGDAWCVCTSTBTCBH YRTCTCTCTCTRYCTCTRR-------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C025 Reverse Complement Original Motif HVGABASAGVGWTDCDDYDRVBAGASAGMGDKH KMGAKAGAGMGAKM KMGAKASAGVGAKHCDDYDRVBAGASAGMGDKH Direction: Forward Position #: 1 Overlap #: 14 Alignment: HVGABASAGVGWTDCDDYDRVBAGASAGMGDKH KMGAKAGAGMGAKM------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 101 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C101 C003 Original Motif Original Motif YTSCCTSKSVSTCCCAR GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC GSCYCTSCCTSBCHSYCCCMVSCCCCCSSC Direction: Forward Position #: 5 Overlap #: 17 Alignment: ----YTSCCTSKSVSTCCCAR--------- GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C017 Combined Motif Original Motif Reverse Complement GSCYCTSCCTSBCHSYCCCMVSCCCCCSSC SWSTCTCTSWSTCTCWSW GSCYCWSYCTSTCHSTCYCHSHCCCCCSSC Direction: Forward Position #: 5 Overlap #: 18 Alignment: GSCYCTSCCTSBCHSYCCCMVSCCCCCSSC ----SWSTCTCTSWSTCTCWSW-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C107 Combined Motif Reverse Complement Reverse Complement GSSGGGGGHSHGMGASHGASAGMSWGKGSC CDGGGBTTVMAGGVBHG GSSGGSGGGSBKHVAVGGVBHGMSWGKGSC Direction: Forward Position #: 6 Overlap #: 17 Alignment: GSSGGGGGHSHGMGASHGASAGMSWGKGSC -----CDGGGBTTVMAGGVBHG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C004 Original Motif Reverse Complement GSSGGSGGGSBKHVAVGGVBHGMSWGKGSC SSSSSSGSGGSSSSGGSSSSSGSSSSS SSSSGSSSGGGGGSBGBGVSGGVSVGVSWGKGSC Direction: Forward Position #: 5 Overlap #: 23 Alignment: ----GSSGGSGGGSBKHVAVGGVBHGMSWGKGSC SSSSSSGSGGSSSSGGSSSSSGSSSSS------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C140 Combined Motif Original Motif Reverse Complement SSSSGSSSGGGGGSBGBGVSGGVSVGVSWGKGSC CVDMGGBSSSVGBGGSB SSBVGGSSSSVGSGGSBGVSGGVSVGVSWGKGSC Direction: Forward Position #: 1 Overlap #: 17 Alignment: SSSSGSSSGGGGGSBGBGVSGGVSVGVSWGKGSC CVDMGGBSSSVGBGGSB----------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 102 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C102 C112 Original Motif Original Motif SCMCCSSSVCCMSS CCBCYSSSGCCCCSS SCCHCCSSSRCCCSS Direction: Backward Position #: 2 Overlap #: 14 Alignment: SCMCCSSSVCCMSS- CCBCYSSSGCCCCSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C140 Combined Motif Original Motif Original Motif SCCHCCSSSRCCCSS BSCCBCVSSSBCCYHVG SCCBCCSCSSCCBCCYHVG Direction: Forward Position #: 3 Overlap #: 13 Alignment: SCCHCCSSSRCCCSS---- --BSCCBCVSSSBCCYHVG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C094 Original Motif Original Motif SCCBCCSCSSCCBCCYHVG SSHCCCSGCCCCSG SSCCCCSSVSCCBSCYHVG Direction: Forward Position #: 1 Overlap #: 14 Alignment: SCCBCCSCSSCCBCCYHVG SSHCCCSGCCCCSG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Reverse Complement Reverse Complement CVDMGSBGGSVSSGGGGSS GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC GSVVGGGGGSGGGGGGGGGVMGGSHGKGSC Direction: Forward Position #: 1 Overlap #: 19 Alignment: CVDMGSBGGSVSSGGGGSS----------- GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C077 Combined Motif Original Motif Reverse Complement GSVVGGGGGSGGGGGGGGGVMGGSHGKGSC BGGGGGSSCCGGGGBS GSVVGGGGGGGGGGSSGGGBHGGSHGKGSC Direction: Forward Position #: 7 Overlap #: 16 Alignment: GSVVGGGGGSGGGGGGGGGVMGGSHGKGSC ------BGGGGGSSCCGGGGBS-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 103 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C103 C053 Original Motif Original Motif RRAGRAACCYTGYY RMACRGAGAAAYCCTGKY RMACRGAGAAACCYTGBY Direction: Forward Position #: 5 Overlap #: 14 Alignment: ----RRAGRAACCYTGYY RMACRGAGAAAYCCTGKY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C027 Reverse Complement Original Motif MVCAKGGTTTCTCKGTYK MRCAGRGAAACCCTGTCTYDW MRCAGGGWWWCYCTGTCTYDW Direction: Forward Position #: 1 Overlap #: 18 Alignment: MVCAKGGTTTCTCKGTYK--- MRCAGRGAAACCCTGTCTYDW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C117 Original Motif Original Motif MRCAGGGWWWCYCTGTCTYDW CMCWRSCTGYCCKG CMCARGSTDHCYBKGTCTYDW Direction: Forward Position #: 1 Overlap #: 14 Alignment: MRCAGGGWWWCYCTGTCTYDW CMCWRSCTGYCCKG------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C109 Original Motif Original Motif CMCARGSTDHCYBKGTCTYDW RMCWSGCTGSCCKY MMCWVGCTGBCCBBGTCTYDW Direction: Forward Position #: 1 Overlap #: 14 Alignment: CMCARGSTDHCYBKGTCTYDW RMCWSGCTGSCCKY------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C132 Original Motif Reverse Complement MMCWVGCTGBCCBBGTCTYDW WCCTKGWTCTCWCMCTGW HMCTBGHTSTCHBBSTSDYDW Direction: Forward Position #: 1 Overlap #: 18 Alignment: MMCWVGCTGBCCBBGTCTYDW WCCTKGWTCTCWCMCTGW--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 104 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C104 C023 Reverse Complement Reverse Complement SSGGHGGGGKGGSS SSGGSGDBGSGGSS SSGGSGGGGGGGSS Direction: Forward Position #: 1 Overlap #: 14 Alignment: SSGGHGGGGKGGSS SSGGSGDBGSGGSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C008 Original Motif Reverse Complement SSGGSGGGGGGGSS SSGGSSGGGGSSGGSS SSGGSBGGGGBGGGSS Direction: Forward Position #: 1 Overlap #: 14 Alignment: SSGGSGGGGGGGSS-- SSGGSSGGGGSSGGSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C054 Original Motif Reverse Complement SSGGSBGGGGBGGGSS SSGGGGGGGHGGSS SSGGBGGGGBGGSSSS Direction: Forward Position #: 1 Overlap #: 14 Alignment: SSGGSBGGGGBGGGSS SSGGGGGGGHGGSS-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C004 Combined Motif Original Motif Reverse Complement SSGGBGGGGBGGSSSS SSSSSSGSGGSSSSGGSSSSSGSSSSS SSGSSGGGGSSGGSSSSGGSSSSSGSSSSS Direction: Forward Position #: 4 Overlap #: 13 Alignment: SSGGBGGGGBGGSSSS-------------- ---SSSSSSGSGGSSSSGGSSSSSGSSSSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C037 Original Motif Reverse Complement SSGSSGGGGSSGGSSSSGGSSSSSGSSSSS BVGGYGKSGGYGBCGGVS SSGGBGGSGGBGSSGGSSGSSSSSGSSSSS Direction: Forward Position #: 1 Overlap #: 18 Alignment: SSGSSGGGGSSGGSSSSGGSSSSSGSSSSS BVGGYGKSGGYGBCGGVS------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 105 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C105 C101 Original Motif Original Motif TGCCKMBSCCKMCCVA YTSCCTSKSVSTCCCAR TGCCTSBSCCTCCCMAY Direction: Backward Position #: 1 Overlap #: 16 Alignment: -TGCCKMBSCCKMCCVA YTSCCTSKSVSTCCCAR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C022 Combined Motif Reverse Complement Reverse Complement KTYGGGAGGSVSAGGCA SVSGGGKGSCBGMGGCV KTYGGGRGGGVSMGGMDGCV Direction: Forward Position #: 4 Overlap #: 14 Alignment: KTYGGGAGGSVSAGGCA--- ---SVSGGGKGSCBGMGGCV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Original Motif Reverse Complement KTYGGGRGGGVSMGGMDGCV GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC GBBGGGGGGSGGGGGVDGSVMGGSHGKGSC Direction: Forward Position #: 1 Overlap #: 20 Alignment: KTYGGGRGGGVSMGGMDGCV---------- GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C140 Combined Motif Original Motif Reverse Complement GBBGGGGGGSGGGGGVDGSVMGGSHGKGSC CVDMGGBSSSVGBGGSB VBBVGGBGSSVGBGGBBGSVMGGSHGKGSC Direction: Forward Position #: 1 Overlap #: 17 Alignment: GBBGGGGGGSGGGGGVDGSVMGGSHGKGSC CVDMGGBSSSVGBGGSB------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C008 Combined Motif Original Motif Reverse Complement VBBVGGBGSSVGBGGBBGSVMGGSHGKGSC SSGGSSGGGGSSGGSS VBBVGSSGGSSGGGGSBGGSVGGSHGKGSC Direction: Forward Position #: 6 Overlap #: 16 Alignment: VBBVGGBGSSVGBGGBBGSVMGGSHGKGSC -----SSGGSSGGGGSSGGSS--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 106 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C106 C060 Reverse Complement Reverse Complement RSTGCCWCTGCSY SYTGCCYYTGCCYS SVCTGCCYCTGCCY Direction: Backward Position #: 2 Overlap #: 13 Alignment: RSTGCCWCTGCSY- SYTGCCYYTGCCYS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C084 Combined Motif Reverse Complement Original Motif MGGCAGMGGCAGVS SCTGCMKCTGCVB MGGCWGHVGCWGCSB Direction: Forward Position #: 3 Overlap #: 12 Alignment: MGGCAGMGGCAGVS- --SCTGCMKCTGCVB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C075 Original Motif Original Motif MGGCWGHVGCWGCSB MGGCAGMSGCAGSCK MGGCAGMSGCAGSCK Direction: Forward Position #: 1 Overlap #: 15 Alignment: MGGCWGHVGCWGCSB MGGCAGMSGCAGSCK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C048 Original Motif Original Motif MGGCAGMSGCAGSCK SGAGGCWSWGGCAGSC SGAGGCWGWGGCAGSCK Direction: Forward Position #: 3 Overlap #: 14 Alignment: --MGGCAGMSGCAGSCK SGAGGCWSWGGCAGSC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C118 Reverse Complement Reverse Complement RGSCTGCCWCWGCCTCS GRGGCASWSGCAGYC GRGGCWSHSKCWGCCTCS Direction: Forward Position #: 2 Overlap #: 14 Alignment: -RGSCTGCCWCWGCCTCS GRGGCASWSGCAGYC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 107 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C107 C003 Original Motif Original Motif CHBBCCTYBAABCCCDG GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC SCCCCCSSCCHBYCCBYCHVBCCCVSGSCY Direction: Backward Position #: 10 Overlap #: 17 Alignment: ----CHBBCCTYBAABCCCDG--------- GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C020 Original Motif Original Motif SCCCCCSSCCHBYCCBYCHVBCCCVSGSCY BSCVCCSCCVCSCCCACS SCCCCCSCCCCSCCCDCCHVBCCCVSGSCY Direction: Forward Position #: 1 Overlap #: 18 Alignment: SCCCCCSSCCHBYCCBYCHVBCCCVSGSCY BSCVCCSCCVCSCCCACS------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C086 Original Motif Reverse Complement SCCCCCSCCCCSCCCDCCHVBCCCVSGSCY CSTSCCYCWGRCTCCSG CSYSCCBCCSVCBCCVSCHVBCCCVSGSCY Direction: Forward Position #: 1 Overlap #: 17 Alignment: SCCCCCSCCCCSCCCDCCHVBCCCVSGSCY CSTSCCYCWGRCTCCSG------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C122 Combined Motif Original Motif Original Motif CSYSCCBCCSVCBCCVSCHVBCCCVSGSCY YAGCCCWGSCWSBCCTR BVBCCCHSBSHSBCCBVCHVBCCCVSGSCY Direction: Forward Position #: 1 Overlap #: 17 Alignment: CSYSCCBCCSVCBCCVSCHVBCCCVSGSCY YAGCCCWGSCWSBCCTR------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C004 Reverse Complement Reverse Complement KGSCSVGGGBVDGVVGGVSHSBSHGGGBBB SSSSSSGSGGSSSSGGSSSSSGSSSSS SSSSSGGSSSSGGSGGVGSVGGSSBSSSHGGGBBB Direction: Forward Position #: 6 Overlap #: 22 Alignment: -----KGSCSVGGGBVDGVVGGVSHSBSHGGGBBB SSSSSSGSGGSSSSGGSSSSSGSSSSS-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 108 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C108 C125 Original Motif Original Motif RBACWGASAWASVY SKASWYASAGRWASMS ASACAGASAWASMBSK Direction: Backward Position #: 1 Overlap #: 14 Alignment: --RBACWGASAWASVY SKASWYASAGRWASMS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C021 Original Motif Original Motif ASACAGASAWASMBSK MKAGMVAGAKAGMK AKASASAGATASMKSK Direction: Forward Position #: 1 Overlap #: 14 Alignment: ASACAGASAWASMBSK MKAGMVAGAKAGMK-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C053 Original Motif Original Motif AKASASAGATASMKSK RMACRGAGAAAYCCTGKY RHACAGAGAAABCBBKKY Direction: Forward Position #: 1 Overlap #: 16 Alignment: AKASASAGATASMKSK-- RMACRGAGAAAYCCTGKY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C017 Combined Motif Reverse Complement Reverse Complement MRYVBGBTTTCTCTGTHK SWSTCTCTSWSTCTCWSW MRCWSKSTHTCTCTSTVTSW Direction: Forward Position #: 3 Overlap #: 16 Alignment: MRYVBGBTTTCTCTGTHK-- --SWSTCTCTSWSTCTCWSW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C070 Combined Motif Reverse Complement Original Motif WSAVASAGAGADASRSWGKY GVGABAGAVAGASVK WSABRGASAGAVAGRSDBKY Direction: Forward Position #: 4 Overlap #: 15 Alignment: WSAVASAGAGADASRSWGKY ---GVGABAGAVAGASVK-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 109 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C109 C117 Original Motif Original Motif RMCWSGCTGSCCKY CMCWRSCTGYCCKG MMCWVGCTGSCCKB Direction: Backward Position #: 1 Overlap #: 14 Alignment: RMCWSGCTGSCCKY CMCWRSCTGYCCKG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C039 Original Motif Original Motif MMCWVGCTGSCCKB SMAGRSCAGSSYGGBS SMMRVGCWGSCCGGBS Direction: Forward Position #: 1 Overlap #: 14 Alignment: MMCWVGCTGSCCKB-- SMAGRSCAGSSYGGBS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C005 Reverse Complement Reverse Complement SBCCGGSCWGCVMRRS WCKAGGCCAGCCTGGYCTACAGA DCBMGGSCAGCCTGGBCTACAGA Direction: Forward Position #: 1 Overlap #: 16 Alignment: SBCCGGSCWGCVMRRS------- WCKAGGCCAGCCTGGYCTACAGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C124 Combined Motif Original Motif Original Motif DCBMGGSCAGCCTGGBCTACAGA WSACSRSGCTGSYSTCSW DCBWGVCCRGSCTGGYCTMCAGA Direction: Forward Position #: 4 Overlap #: 18 Alignment: DCBMGGSCAGCCTGGBCTACAGA ---WSACSRSGCTGSYSTCSW-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C122 Reverse Complement Reverse Complement TCTGYAGKCCAGSCKGGVCWBGH MAGGVSWGSCWGGGCTK MWSKVBAGBCHRGGCTGGVCWBGH Direction: Forward Position #: 2 Overlap #: 16 Alignment: -TCTGYAGKCCAGSCKGGVCWBGH MAGGVSWGSCWGGGCTK------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 110 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C110 C035 Original Motif Original Motif YYCTKTCTCMAARR WWACCYKGTCTMRAAAWW WCYCTGTCTCVAAADWWA Direction: Backward Position #: 2 Overlap #: 14 Alignment: ---YYCTKTCTCMAARR- WWACCYKGTCTMRAAAWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C021 Original Motif Reverse Complement WCYCTGTCTCVAAADWWA RYCTRTCTVYCTRY RYCTVTSTCTCDAHADWWA Direction: Forward Position #: 2 Overlap #: 13 Alignment: -WCYCTGTCTCVAAADWWA RYCTRTCTVYCTRY----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C034 Reverse Complement Original Motif TWWDTHTDGAGASAVAGMK SCACTGSGGAGSMAGAGS BHWBTBBRGAGVSAGAGVK Direction: Forward Position #: 1 Overlap #: 18 Alignment: TWWDTHTDGAGASAVAGMK SCACTGSGGAGSMAGAGS- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C128 Reverse Complement Original Motif RVCTCTSBCTCMVVABWDV SYCTSRSTGTCSYSGARS VBCTSDSTSTCSBVRDDBV Direction: Forward Position #: 1 Overlap #: 18 Alignment: RVCTCTSBCTCMVVABWDV SYCTSRSTGTCSYSGARS- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Original Motif Original Motif VBCTSDSTSTCSBVRDDBV GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC GBCTCDSYCTCCCBVVHCCCSSCCCCCSSC Direction: Forward Position #: 1 Overlap #: 19 Alignment: VBCTSDSTSTCSBVRDDBV----------- GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 111 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C111 C124 Reverse Complement Reverse Complement YSGAWKTCAGMWATBA WSGASKSCAGCSMSGTSW WSGADKBCAGMBMBGDSW Direction: Forward Position #: 1 Overlap #: 16 Alignment: YSGAWKTCAGMWATBA-- WSGASKSCAGCSMSGTSW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C032 Original Motif Original Motif WSGADKBCAGMBMBGDSW HWAAWYDAAAMWRWAMWR HDRADTDMARMHRDRHBW Direction: Forward Position #: 1 Overlap #: 18 Alignment: WSGADKBCAGMBMBGDSW HWAAWYDAAAMWRWAMWR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C079 Original Motif Original Motif HDRADTDMARMHRDRHBW ADAAAKWAAAAWAKARW HDAAHKWMAAAWADAAHW Direction: Forward Position #: 1 Overlap #: 17 Alignment: HDRADTDMARMHRDRHBW ADAAAKWAAAAWAKARW- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C097 Combined Motif Reverse Complement Reverse Complement WHTTDTWTTTYWRHTTDH WVTTSWWTTTTWWSTTBW WHTTVTTBTTTTTTTWBTTBW Direction: Forward Position #: 4 Overlap #: 15 Alignment: WHTTDTWTTTYWRHTTDH--- ---WVTTSWWTTTTWWSTTBW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C016 Combined Motif Original Motif Reverse Complement WHTTVTTBTTTTTTTWBTTBW WWTTYTWTYTTWDTTTWTTWH WHTTHTTTTTTTTTTWDTTTWTTWH Direction: Forward Position #: 5 Overlap #: 17 Alignment: WHTTVTTBTTTTTTTWBTTBW---- ----WWTTYTWTYTTWDTTTWTTWH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 112 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C112 C140 Original Motif Original Motif CCBCYSSSGCCCCSS BSCCBCVSSSBCCYHVG CCBCBSSSGCCHMSGBS Direction: Backward Position #: 1 Overlap #: 15 Alignment: --CCBCYSSSGCCCCSS BSCCBCVSSSBCCYHVG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C058 Combined Motif Original Motif Original Motif CCBCBSSSGCCHMSGBS CYCCBCSGVCYCCBC CCBCCSSSGCCYCCBCS Direction: Forward Position #: 2 Overlap #: 15 Alignment: CCBCBSSSGCCHMSGBS -CYCCBCSGVCYCCBC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C004 Combined Motif Original Motif Original Motif CCBCCSSSGCCYCCBCS SSSSSCSSSSSCCSSSSCCSCSSSSSS CCBCSSSSSCCCCSSCSSSSCCSCSSSSSS Direction: Forward Position #: 4 Overlap #: 14 Alignment: CCBCCSSSGCCYCCBCS------------- ---SSSSSCSSSSSCCSSSSCCSCSSSSSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C003 Original Motif Original Motif CCBCSSSSSCCCCSSCSSSSCCSCSSSSSS GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC GSCCCBSCCBSCCCCCCCCCSSCCCCCSSCSSS Direction: Forward Position #: 4 Overlap #: 27 Alignment: ---CCBCSSSSSCCCCSSCSSSSCCSCSSSSSS GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C022 Combined Motif Original Motif Original Motif GSCCCBSCCBSCCCCCCCCCSSCCCCCSSCSSS BGCCYCBGSCYCCCSVS GSCCCBSBSYCYCBSCCCCCCSCCCCCSSCSSS Direction: Forward Position #: 8 Overlap #: 17 Alignment: GSCCCBSCCBSCCCCCCCCCSSCCCCCSSCSSS -------BGCCYCBGSCYCCCSVS--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 113 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C113 C058 Original Motif Original Motif CHCCSCSVSCCCC CYCCBCSGVCYCCBC BCCYCCSCSSSCYCC Direction: Backward Position #: 3 Overlap #: 13 Alignment: CHCCSCSVSCCCC-- CYCCBCSGVCYCCBC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C112 Combined Motif Original Motif Original Motif BCCYCCSCSSSCYCC CCBCYSSSGCCCCSS BCCCCCBCSSGCCCCSS Direction: Forward Position #: 3 Overlap #: 13 Alignment: BCCYCCSCSSSCYCC-- --CCBCYSSSGCCCCSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Reverse Complement Reverse Complement SSGGGGCSSGBGGGGGV GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC GSGGGGSSSSGGGGGGDGGVMGGSHGKGSC Direction: Forward Position #: 1 Overlap #: 17 Alignment: SSGGGGCSSGBGGGGGV------------- GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C020 Combined Motif Original Motif Reverse Complement GSGGGGSSSSGGGGGGDGGVMGGSHGKGSC SGTGGGSGVGGSGGVGSB GSGGGGSGBGGGGGGGGGGGMGSSHGKGSC Direction: Forward Position #: 7 Overlap #: 18 Alignment: GSGGGGSSSSGGGGGGDGGVMGGSHGKGSC ------SGTGGGSGVGGSGGVGSB------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C071 Combined Motif Reverse Complement Original Motif GSCYCHSSCYCCCCCCCCCCCBCSCCCCSC SVCCACSVSCACCBS GSCYCHSSCCMCSCCCMCCCSBCSCCCCSC Direction: Forward Position #: 7 Overlap #: 15 Alignment: GSCYCHSSCYCCCCCCCCCCCBCSCCCCSC ------SVCCACSVSCACCBS--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 114 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C114 C027 Original Motif Original Motif SRARCCMKGTCTYS MRCAGRGAAACCCTGTCTYDW WGAAACCCTGTCTYVMRCAGR Direction: Backward Position #: 2 Overlap #: 14 Alignment: ------SRARCCMKGTCTYS- MRCAGRGAAACCCTGTCTYDW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C015 Reverse Complement Reverse Complement MCTGKYVKAGACAGGGTTTCW RGCTVTGTAGCCYWGGCTVD VVYKBTGTAGMCHDGGYTDHW Direction: Forward Position #: 1 Overlap #: 20 Alignment: MCTGKYVKAGACAGGGTTTCW RGCTVTGTAGCCYWGGCTVD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C120 Reverse Complement Original Motif WDDAKCCHHGRCTACABRMVB TGARACMSKGTYTCA WGAADCCBDGDYTVVABRMVB Direction: Forward Position #: 1 Overlap #: 15 Alignment: WDDAKCCHHGRCTACABRMVB TGARACMSKGTYTCA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C005 Combined Motif Reverse Complement Original Motif VVYKBTBVAKDCDBGGDTTCW TCTGTAGMCCAGGCTGGCCTYGW VVYTBTGDAGVCCAGGCTKSHCTYGW Direction: Forward Position #: 4 Overlap #: 18 Alignment: VVYKBTBVAKDCDBGGDTTCW----- ---TCTGTAGMCCAGGCTGGCCTYGW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C045 Combined Motif Reverse Complement Original Motif WCKAGDSYAGCCTGGBCTDCABAMVB RYAGMCMKGKCTRY WCKAGRBHRVCCKGGBYDHCABAMVB Direction: Forward Position #: 6 Overlap #: 14 Alignment: WCKAGDSYAGCCTGGBCTDCABAMVB -----RYAGMCMKGKCTRY------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 115 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C115 C009 Reverse Complement Original Motif RHCCCASCRCKDY ABGCCTTTAATCCCAGCACTHR CAGCACTHRRBSCCWBYAMTCC Direction: Backward Position #: 10 Overlap #: 13 Alignment: RHCCCASCRCKDY--------- ABGCCTTTAATCCCAGCACTHR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C019 Reverse Complement Reverse Complement GGARTKVWGGSVKMHAGTGCTG CTGCCTCCCAAGTGCTGGGMWR CTGCCTCCCAAGTGCKGRGHDRWGGSVKMHAGTGCTG Direction: Forward Position #: 16 Overlap #: 7 Alignment: ---------------GGARTKVWGGSVKMHAGTGCTG CTGCCTCCCAAGTGCTGGGMWR--------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C099 Combined Motif Original Motif Original Motif CTGCCTCCCAAGTGCKGRGHDRWGGSVKMHAGTGCTG MYCCCMGCACTCKGGARK CTVCCYCCVMASTSCKGARDDRWGGSVKMHAGTGCTG Direction: Forward Position #: 3 Overlap #: 18 Alignment: CTGCCTCCCAAGTGCKGRGHDRWGGSVKMHAGTGCTG --MYCCCMGCACTCKGGARK----------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C141 Original Motif Original Motif CTVCCYCCVMASTSCKGARDDRWGGSVKMHAGTGCTG YMATCCYRSYRCTTGKR CHVYCCCVSHACTKSKGARDDRWGGSVKMHAGTGCTG Direction: Forward Position #: 1 Overlap #: 17 Alignment: CTVCCYCCVMASTSCKGARDDRWGGSVKMHAGTGCTG YMATCCYRSYRCTTGKR-------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C003 Reverse Complement Original Motif CAGCACTHRRBSCCWMDDMTCYSRAGTDSBGGGMBHG GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC GSCYCAGCMYDYVHBSCCHCVVCYCCSVMSTDSBGGGMBHG Direction: Forward Position #: 5 Overlap #: 26 Alignment: ----CAGCACTHRRBSCCWMDDMTCYSRAGTDSBGGGMBHG GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 116 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C116 C080 Original Motif Original Motif WWMAWACACWMAWW WWAAVAAMMHAAWW WWAADAMACHMAWW Direction: Backward Position #: 1 Overlap #: 14 Alignment: WWMAWACACWMAWW WWAAVAAMMHAAWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C016 Combined Motif Original Motif Original Motif WWAADAMACHMAWW HWAAWAAAHWAAMAWAMAAWW WWAAWAMACWMAHAWAMAAWW Direction: Forward Position #: 1 Overlap #: 14 Alignment: WWAADAMACHMAWW------- HWAAWAAAHWAAMAWAMAAWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C062 Combined Motif Reverse Complement Reverse Complement WWTTYTWTHTYWGTYTWTTWW WWDTTWMTRTRKWTYTWW WWTTHTWTTTHTRTBTWTTTWW Direction: Forward Position #: 5 Overlap #: 17 Alignment: WWTTYTWTHTYWGTYTWTTWW- ----WWDTTWMTRTRKWTYTWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C133 Combined Motif Original Motif Reverse Complement WWTTHTWTTTHTRTBTWTTTWW WTYWKHGTGTDHWTRWT WWTTWTHTTWBTGTDHWTDWWW Direction: Forward Position #: 5 Overlap #: 17 Alignment: WWTTHTWTTTHTRTBTWTTTWW ----WTYWKHGTGTDHWTRWT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C139 Combined Motif Original Motif Reverse Complement WWTTWTHTTWBTGTDHWTDWWW WWTTTTVWWWBTTTYWW WWTTTTBWWWBTKTBWWTDWWW Direction: Forward Position #: 1 Overlap #: 17 Alignment: WWTTWTHTTWBTGTDHWTDWWW WWTTTTVWWWBTTTYWW----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 117 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C117 C109 Original Motif Original Motif CMCWRSCTGYCCKG RMCWSGCTGSCCKY MMCWVGCTGSCCKB Direction: Backward Position #: 1 Overlap #: 14 Alignment: CMCWRSCTGYCCKG RMCWSGCTGSCCKY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C122 Reverse Complement Original Motif BRGGSCAGCVWGYR YAGCCCWGSCWSBCCTR YAGSCCAGSCWGYCCTR Direction: Forward Position #: 1 Overlap #: 14 Alignment: BRGGSCAGCVWGYR--- YAGCCCWGSCWSBCCTR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C039 Combined Motif Reverse Complement Original Motif MAGGMCWGSCTGGSCTK SMAGRSCAGSSYGGBS MAGSMMGGSCWGSSCKGBS Direction: Forward Position #: 4 Overlap #: 14 Alignment: MAGGMCWGSCTGGSCTK-- ---SMAGRSCAGSSYGGBS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C121 Original Motif Reverse Complement MAGSMMGGSCWGSSCKGBS RKGGASMGCKAGGGMY VDGGMVVGCBAGGSMBGBS Direction: Forward Position #: 1 Overlap #: 16 Alignment: MAGSMMGGSCWGSSCKGBS RKGGASMGCKAGGGMY--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Reverse Complement Original Motif SBCVRSCCTBGCBVYCCDB GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC SBCGVCCCTBSCBVYCCBBCCCCSSCCCCCSSC Direction: Forward Position #: 4 Overlap #: 16 Alignment: SBCVRSCCTBGCBVYCCDB-------------- ---GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 118 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C118 C048 Reverse Complement Original Motif GRGGCASWSGCAGYC SGAGGCWSWGGCAGSC SGRGSMBBVGSMRGCC Direction: Forward Position #: 1 Overlap #: 15 Alignment: GRGGCASWSGCAGYC- SGAGGCWSWGGCAGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C066 Original Motif Reverse Complement SGRGSMBBVGSMRGCC YAGAGGCRSYGGGARTR YAGVGGSRVBDDGVVKDCC Direction: Forward Position #: 4 Overlap #: 14 Alignment: ---SGRGSMBBVGSMRGCC YAGAGGCRSYGGGARTR-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C101 Original Motif Reverse Complement YAGVGGSRVBDDGVVKDCC MTGGGASVSYSAGGSAK HWGRGRSRSYSVGGVDKCC Direction: Forward Position #: 1 Overlap #: 17 Alignment: YAGVGGSRVBDDGVVKDCC MTGGGASVSYSAGGSAK-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Reverse Complement Original Motif GGYDVCCBSMSMSKCMCWD GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC GGYDSCCYBVSCBDCCCHBCCCCSSCCCCCSSC Direction: Forward Position #: 4 Overlap #: 16 Alignment: GGYDVCCBSMSMSKCMCWD-------------- ---GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C012 Combined Motif Original Motif Reverse Complement GGYDSCCYBVSCBDCCCHBCCCCSSCCCCCSSC YRTCTCTCTCTRYCTCTRR GGYDSCCYVBCYYBCYCTVYCYCBVVCCCCSSC Direction: Forward Position #: 8 Overlap #: 19 Alignment: GGYDSCCYBVSCBDCCCHBCCCCSSCCCCCSSC -------YRTCTCTCTCTRYCTCTRR------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 119 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C119 C046 Original Motif Original Motif SWRTYCCAGRACWS KSTGKCCTRGAACWSM KSTGTCCYAGAACWSM Direction: Forward Position #: 2 Overlap #: 14 Alignment: -SWRTYCCAGRACWS- KSTGKCCTRGAACWSM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C007 Original Motif Reverse Complement KSTGTCCYAGAACWSM SAGGCTGYCCTVGAACTCASAAY SAGGCTGTCCYRGAACTCASAAY Direction: Forward Position #: 4 Overlap #: 16 Alignment: ---KSTGTCCYAGAACWSM---- SAGGCTGYCCTVGAACTCASAAY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C009 Original Motif Original Motif SAGGCTGTCCYRGAACTCASAAY ABGCCTTTAATCCCAGCACTHR ABGCMKKYWRTCCYAGMACTBASAAY Direction: Forward Position #: 4 Overlap #: 19 Alignment: ---SAGGCTGTCCYRGAACTCASAAY ABGCCTTTAATCCCAGCACTHR---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C111 Original Motif Original Motif ABGCMKKYWRTCCYAGMACTBASAAY TBATWYCTGARWTCSM TBABDYCTGHRDTCCHAGMACTBASAAY Direction: Forward Position #: 3 Overlap #: 14 Alignment: --ABGCMKKYWRTCCYAGMACTBASAAY TBATWYCTGARWTCSM------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C040 Combined Motif Original Motif Original Motif TBABDYCTGHRDTCCHAGMACTBASAAY RSTGASYTCMARSYCAGY TBABDYVBKGAVTYCMAGSWCWSHSAAY Direction: Forward Position #: 7 Overlap #: 18 Alignment: TBABDYCTGHRDTCCHAGMACTBASAAY ------RSTGASYTCMARSYCAGY---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 120 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C120 C027 Original Motif Original Motif TGARACMSKGTYTCA MRCAGRGAAACCCTGTCTYDW WDGAAACCCTGTYTCDMRCAG Direction: Backward Position #: 2 Overlap #: 15 Alignment: -----TGARACMSKGTYTCA- MRCAGRGAAACCCTGTCTYDW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C101 Reverse Complement Reverse Complement CTGKYDGAKACAGGGTTTCDW MTGGGASVSYSAGGSAK MTGGBAGAGHCAGGSWKTCDW Direction: Forward Position #: 1 Overlap #: 17 Alignment: CTGKYDGAKACAGGGTTTCDW MTGGGASVSYSAGGSAK---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C015 Original Motif Reverse Complement MTGGBAGAGHCAGGSWKTCDW RGCTVTGTAGCCYWGGCTVD RGCTVKGWVGBMCWGGSTDTCDW Direction: Forward Position #: 3 Overlap #: 18 Alignment: --MTGGBAGAGHCAGGSWKTCDW RGCTVTGTAGCCYWGGCTVD--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C036 Original Motif Reverse Complement RGCTVKGWVGBMCWGGSTDTCDW RRCTRRRTCTCRRRCTRY RRCTRDRTVKCVVRSKVYDTCDW Direction: Forward Position #: 1 Overlap #: 18 Alignment: RGCTVKGWVGBMCWGGSTDTCDW RRCTRRRTCTCRRRCTRY----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C125 Reverse Complement Reverse Complement WDGAHMVYSKVBGYVAMHMAGMK SYSTWKCTSTMWSTRS DHGTHDSTSTMHSTRVMHMAGMK Direction: Forward Position #: 1 Overlap #: 16 Alignment: WDGAHMVYSKVBGYVAMHMAGMK SYSTWKCTSTMWSTRS------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 121 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C121 C122 Original Motif Original Motif MRCCCTRGCYSTCCYK YAGCCCWGSCWSBCCTR YAGCCCTGGCHSYCCYD Direction: Forward Position #: 2 Overlap #: 16 Alignment: -MRCCCTRGCYSTCCYK YAGCCCWGSCWSBCCTR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C096 Reverse Complement Reverse Complement HMGGMSHGCCAGGGCTK RKGGCMMGSCKRGRKY VDGGHVMGCCDGGGBYK Direction: Forward Position #: 1 Overlap #: 16 Alignment: HMGGMSHGCCAGGGCTK RKGGCMMGSCKRGRKY- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C055 Original Motif Original Motif VDGGHVMGCCDGGGBYK MKAGAGMKMKAGAGMK MDRGVSMGCBAGRGHTK Direction: Forward Position #: 1 Overlap #: 16 Alignment: VDGGHVMGCCDGGGBYK MKAGAGMKMKAGAGMK- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C101 Combined Motif Reverse Complement Reverse Complement YADCMCTBGCYSBCMDY MTGGGASVSYSAGGSAK YADMHBKSRCBSYSMGBSAK Direction: Forward Position #: 4 Overlap #: 14 Alignment: YADCMCTBGCYSBCMDY--- ---MTGGGASVSYSAGGSAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Reverse Complement Original Motif YTSBCYSMSVGKSYBHRHTK GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC YTSBSBSHCHSYCYVCVHBBCCCCSSCCCCCSSC Direction: Forward Position #: 5 Overlap #: 16 Alignment: YTSBCYSMSVGKSYBHRHTK-------------- ----GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 122 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C122 C005 Original Motif Original Motif YAGCCCWGSCWSBCCTR TCTGTAGMCCAGGCTGGCCTYGW TCTGTAGCCCAGGCTGGCCTVGW Direction: Forward Position #: 5 Overlap #: 17 Alignment: ----YAGCCCWGSCWSBCCTR-- TCTGTAGMCCAGGCTGGCCTYGW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C073 Combined Motif Original Motif Reverse Complement TCTGTAGCCCAGGCTGGCCTVGW KAGYSYKGGCTKRSCWYK TCTGKAGCCCDGGCTGGCCTBGW Direction: Forward Position #: 5 Overlap #: 18 Alignment: TCTGTAGCCCAGGCTGGCCTVGW ----KAGYSYKGGCTKRSCWYK- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C107 Original Motif Reverse Complement TCTGKAGCCCDGGCTGGCCTBGW CDGGGBTTVMAGGVBHG YHKGKVKYVMDGGCKBGCCTBGW Direction: Forward Position #: 1 Overlap #: 17 Alignment: TCTGKAGCCCDGGCTGGCCTBGW CDGGGBTTVMAGGVBHG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Original Motif Reverse Complement YHKGKVKYVMDGGCKBGCCTBGW GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC BBBGGGGBSVRGGSKBGSSHHGDSHGKGSC Direction: Forward Position #: 1 Overlap #: 23 Alignment: YHKGKVKYVMDGGCKBGCCTBGW------- GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C022 Combined Motif Reverse Complement Original Motif GSCYCHSHCDHSSCBYSCCMVSBCCCCBBB BGCCYCBGSCYCCCSVS GSCYCBCYYBHSSCYCCCCVSSBCCCCBBB Direction: Forward Position #: 5 Overlap #: 17 Alignment: GSCYCHSHCDHSSCBYSCCMVSBCCCCBBB ----BGCCYCBGSCYCCCSVS--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 123 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C123 C111 Original Motif Reverse Complement GAAMTCWGAAATC YSGAWKTCAGMWATBA BAGRAHTYHRRAAWYY Direction: Backward Position #: 3 Overlap #: 13 Alignment: -GAAMTCWGAAATC-- YSGAWKTCAGMWATBA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C053 Combined Motif Reverse Complement Reverse Complement MKWTTKKDKAHTKCTB MRCAGGMTTTCTCKGTYK MKWHDBWKGATTTCTSKGTYK Direction: Forward Position #: 4 Overlap #: 13 Alignment: MKWTTKKDKAHTKCTB----- ---MRCAGGMTTTCTCKGTYK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C139 Combined Motif Original Motif Reverse Complement MKWHDBWKGATTTCTSKGTYK WWTTTTVWWWBTTTYWW MKWWWYTTKVWTTCTYTKTWK Direction: Forward Position #: 4 Overlap #: 17 Alignment: MKWHDBWKGATTTCTSKGTYK ---WWTTTTVWWWBTTTYWW- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C032 Combined Motif Reverse Complement Original Motif RWAYAMAGAAWBRAAMWWWYY HWAAWYDAAAMWRWAMWR DWAMWHARAAHHRWAMWDWYY Direction: Forward Position #: 1 Overlap #: 18 Alignment: RWAYAMAGAAWBRAAMWWWYY HWAAWYDAAAMWRWAMWR--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C001 Combined Motif Original Motif Original Motif DWAMWHARAAHHRWAMWDWYY WWWAAAAAWWAAAAAWAAAAAWWAAAAHWW DWAMWWAAAAAWAWAAAAWHWAAAAWWAAAAHWW Direction: Forward Position #: 5 Overlap #: 17 Alignment: DWAMWHARAAHHRWAMWDWYY------------- ----WWWAAAAAWWAAAAAWAAAAAWWAAAAHWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 124 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C124 C005 Original Motif Original Motif WSACSRSGCTGSYSTCSW TCTGTAGMCCAGGCTGGCCTYGW TCTGTAGMCCAGGCTGGCCTCGW Direction: Forward Position #: 6 Overlap #: 18 Alignment: -----WSACSRSGCTGSYSTCSW TCTGTAGMCCAGGCTGGCCTYGW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C004 Reverse Complement Reverse Complement WCGAGGCCAGCCTGGYCTACAGA SSSSSSGSGGSSSSGGSSSSSGSSSSS BSGRSGSCRGCSKSGBSBRCRGVSSSS Direction: Forward Position #: 1 Overlap #: 23 Alignment: WCGAGGCCAGCCTGGYCTACAGA---- SSSSSSGSGGSSSSGGSSSSSGSSSSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C047 Combined Motif Reverse Complement Original Motif SSSSBCKGKVSBCSYSGCKGSCSKCSB TSGAAMTCACTMKGTASA SSSSBCKGKVSBCSYSGCKGSCSTSGAAMTCACTMKGTASA Direction: Forward Position #: 24 Overlap #: 4 Alignment: SSSSBCKGKVSBCSYSGCKGSCSKCSB-------------- -----------------------TSGAAMTCACTMKGTASA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C042 Combined Motif Reverse Complement Reverse Complement TSTACRYAGTGAYTTCSASGSCRGCSKSGBSBRCRGVSSSS WGAGTRMGTTCKRGGACW TSTACDBAGTGABTTCKRGGVCDGCSKSGBSBRCRGVSSSS Direction: Forward Position #: 6 Overlap #: 18 Alignment: TSTACRYAGTGAYTTCSASGSCRGCSKSGBSBRCRGVSSSS -----WGAGTRMGTTCKRGGACW------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C092 Combined Motif Reverse Complement Reverse Complement SSSSBCKGKVSBCSYSGCDGBCCKYGAABTCACTBDGTASA KKTCGMSGCCASKCTGMM SSSSBCKGKDKBCSHSGCCRBBCTGVAABTCACTBDGTASA Direction: Forward Position #: 10 Overlap #: 18 Alignment: SSSSBCKGKVSBCSYSGCDGBCCKYGAABTCACTBDGTASA ---------KKTCGMSGCCASKCTGMM-------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 125 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C125 C012 Original Motif Original Motif SKASWYASAGRWASMS MKAGAGMKAGAGAGAGAKM MVGASMBAGAGRDASABMK Direction: Backward Position #: 2 Overlap #: 16 Alignment: --SKASWYASAGRWASMS- MKAGAGMKAGAGAGAGAKM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C011 Combined Motif Reverse Complement Reverse Complement RRBTSTDKCTCTVYSTCBY RRTCTCTCTCRRTCTCRR RRVTCTVTCTCDRTCTCDD Direction: Forward Position #: 2 Overlap #: 18 Alignment: RRBTSTDKCTCTVYSTCBY -RRTCTCTCTCRRTCTCRR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C036 Original Motif Reverse Complement RRVTCTVTCTCDRTCTCDD RRCTRRRTCTCRRRCTRY RRVTVDVTCTCDRDCTVBD Direction: Forward Position #: 1 Overlap #: 18 Alignment: RRVTCTVTCTCDRTCTCDD RRCTRRRTCTCRRRCTRY- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C085 Combined Motif Original Motif Original Motif RRVTVDVTCTCDRDCTVBD VSGRSBHAGARDVSGRS RRVBSGRBBBMRARBBVGVS Direction: Forward Position #: 4 Overlap #: 16 Alignment: RRVTVDVTCTCDRDCTVBD- ---VSGRSBHAGARDVSGRS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C017 Combined Motif Reverse Complement Original Motif SBCVVBMTMYVBBKCSVVMK WSWGAGASWSAGAGASWS SBCVHSHKMGASHSMGAGABWS Direction: Forward Position #: 5 Overlap #: 16 Alignment: SBCVVBMTMYVBBKCSVVMK-- ----WSWGAGASWSAGAGASWS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 126 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C126 C039 Original Motif Original Motif SVWGRCSMKSCTGGYS SMAGRSCAGSSYGGBS SVAGRSCAGSCTGGBS Direction: Backward Position #: 1 Overlap #: 16 Alignment: SVWGRCSMKSCTGGYS SMAGRSCAGSSYGGBS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C005 Combined Motif Reverse Complement Reverse Complement SVCCAGSCTGSMCTBS WCKAGGCCAGCCTGGYCTACAGA SDCBAGGCYRGCCTGGYCTACAGA Direction: Forward Position #: 2 Overlap #: 15 Alignment: SVCCAGSCTGSMCTBS-------- -WCKAGGCCAGCCTGGYCTACAGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C073 Reverse Complement Original Motif TCTGTAGMCCAGGCKKGCCTBGDS YMWGSMYAGCCRKSKCTR YMTGBABASCMGGSKBKVCTBGDS Direction: Forward Position #: 1 Overlap #: 18 Alignment: TCTGTAGMCCAGGCKKGCCTBGDS YMWGSMYAGCCRKSKCTR------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C140 Combined Motif Original Motif Original Motif YMTGBABASCMGGSKBKVCTBGDS BSCCBCVSSSBCCYHVG YMTGBHBMCCCRGSBBSCCHVGDS Direction: Forward Position #: 6 Overlap #: 17 Alignment: YMTGBABASCMGGSKBKVCTBGDS -----BSCCBCVSSSBCCYHVG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C124 Combined Motif Original Motif Reverse Complement YMTGBHBMCCCRGSBBSCCHVGDS WSGASKSCAGCSMSGTSW YMTDBBVVBSCAGCSVSSYBDGDS Direction: Forward Position #: 4 Overlap #: 18 Alignment: YMTGBHBMCCCRGSBBSCCHVGDS ---WSGASKSCAGCSMSGTSW--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 127 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C127 C107 Original Motif Original Motif CKCCYYTHATCCCMG CHBBCCTYBAABCCCDG CBCCYYTVAYCCCHGCH Direction: Backward Position #: 1 Overlap #: 15 Alignment: --CKCCYYTHATCCCMG CHBBCCTYBAABCCCDG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C009 Original Motif Original Motif CBCCYYTVAYCCCHGCH ABGCCTTTAATCCCAGCACTHR ABDCCTTTAATCCCAGCACTHR Direction: Forward Position #: 2 Overlap #: 17 Alignment: -CBCCYYTVAYCCCHGCH---- ABGCCTTTAATCCCAGCACTHR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C083 Combined Motif Reverse Complement Original Motif MHAGTGCTGGGATTAAAGGHBT CKBCCTSYRSCTCMMG MHMGBSCTGBGVYTVMAGGHBT Direction: Forward Position #: 3 Overlap #: 16 Alignment: MHAGTGCTGGGATTAAAGGHBT --CKBCCTSYRSCTCMMG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C058 Combined Motif Reverse Complement Original Motif ABDCCTYVAMBCBCAGSVCYHR CYCCBCSGVCYCCBC ABDCCYYCVMSSBCHSCDCYHR Direction: Forward Position #: 5 Overlap #: 15 Alignment: ABDCCTYVAMBCBCAGSVCYHR ----CYCCBCSGVCYCCBC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C022 Combined Motif Reverse Complement Reverse Complement MHMGHGSHGBSSRBGKMGGHBT SVSGGGKGSCBGMGGCV MHMGVGSDGGGSGBVGMGGCVT Direction: Forward Position #: 5 Overlap #: 17 Alignment: MHMGHGSHGBSSRBGKMGGHBT ----SVSGGGKGSCBGMGGCV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 128 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C128 C092 Reverse Complement Reverse Complement SKTCSMSGACASKSAGMS KKTCGMSGCCASKCTGMM BKTCGMSGMCASKCWGMM Direction: Backward Position #: 1 Overlap #: 18 Alignment: SKTCSMSGACASKSAGMS KKTCGMSGCCASKCTGMM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C095 Reverse Complement Original Motif RYCWGRSTGYCSYCGARB KCCAKMSTGGTSKMCAGM DYCAGASTGBYSBCSARH Direction: Forward Position #: 1 Overlap #: 18 Alignment: RYCWGRSTGYCSYCGARB KCCAKMSTGGTSKMCAGM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C004 Combined Motif Reverse Complement Original Motif DMTSGVSKBCASTCTGKH SSSSSCSSSSSCCSSSSCCSCSSSSSS DMTSSVSSCCVSBSYSGCSSCCSCSSSSSS Direction: Forward Position #: 4 Overlap #: 15 Alignment: DMTSGVSKBCASTCTGKH------------ ---SSSSSCSSSSSCCSSSSCCSCSSSSSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C012 Combined Motif Original Motif Reverse Complement DMTSSVSSCCVSBSYSGCSSCCSCSSSSSS YRTCTCTCTCTRYCTCTRR BVTCKVBSYCDVYCTSKVVSCCSCSSSSSS Direction: Forward Position #: 1 Overlap #: 19 Alignment: DMTSSVSSCCVSBSYSGCSSCCSCSSSSSS YRTCTCTCTCTRYCTCTRR----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C020 Combined Motif Reverse Complement Reverse Complement SSSSSSGSGGSVVRSAGKVDGMSBVRGABV SGTGGGSGVGGSGGVGSB SSBGGGSGGGGSGGSRSBVDGMSBVRGABV Direction: Forward Position #: 1 Overlap #: 18 Alignment: SSSSSSGSGGSVVRSAGKVDGMSBVRGABV SGTGGGSGVGGSGGVGSB------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 129 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C129 C026 Reverse Complement Reverse Complement RRTCTCKKMMTAGCRY RRTCTCRRRRTCTCRR RRTCTCDDVATMKCRH Direction: Backward Position #: 1 Overlap #: 16 Alignment: RRTCTCKKMMTAGCRY RRTCTCRRRRTCTCRR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C012 Combined Motif Reverse Complement Original Motif HKGYYATBHHGAGAMM MKAGAGMKAGAGAGAGAKM HKGCBAKDVMGAGAVMGAGAKM Direction: Forward Position #: 4 Overlap #: 13 Alignment: HKGYYATBHHGAGAMM------ ---MKAGAGMKAGAGAGAGAKM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C036 Original Motif Original Motif HKGCBAKDVMGAGAVMGAGAKM MKAGMKMGAGAKMKAGMK MBDGMKAGAGHKAGAGMKAGAKM Direction: Forward Position #: 2 Overlap #: 17 Alignment: -HKGCBAKDVMGAGAVMGAGAKM MKAGMKMGAGAKMKAGMK----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C017 Combined Motif Reverse Complement Reverse Complement YRTCTYYCTCTYHCTCTRRCDVY SWSTCTCTSWSTCTCWSW YRTCTSTCTCTCTSTCTVDCWVY Direction: Forward Position #: 4 Overlap #: 18 Alignment: YRTCTYYCTCTYHCTCTRRCDVY ---SWSTCTCTSWSTCTCWSW-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C013 Reverse Complement Reverse Complement KBWGDVAGASAGAGAGASAGAKM YCCTGGTCTACADAGTGAGTTCCAGVW YCCTGGTHKACAGAGTGAGWKMSAGVDM Direction: Forward Position #: 6 Overlap #: 22 Alignment: -----KBWGDVAGASAGAGAGASAGAKM YCCTGGTCTACADAGTGAGTTCCAGVW- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 130 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C130 C007 Original Motif Original Motif TKCCWGGVCWGCMA KTTSTGAGTTCVAGGMCAGCCTS STTCCAGGMCAGCCWKTTSTGAG Direction: Backward Position #: 2 Overlap #: 14 Alignment: --------TKCCWGGVCWGCMA- KTTSTGAGTTCVAGGMCAGCCTS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C151 Original Motif Reverse Complement STTCCAGGMCAGCCWKTTSTGAG SWBCCWGGYCWGCCWS STKCCWGGHCWGCCWBTTSTGAG Direction: Forward Position #: 1 Overlap #: 16 Alignment: STTCCAGGMCAGCCWKTTSTGAG SWBCCWGGYCWGCCWS------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C128 Original Motif Reverse Complement STKCCWGGHCWGCCWBTTSTGAG SKTCSMSGACASKSAGMS STTCSAGGHCASBCAGHBSTGAG Direction: Forward Position #: 1 Overlap #: 18 Alignment: STKCCWGGHCWGCCWBTTSTGAG SKTCSMSGACASKSAGMS----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C150 Reverse Complement Original Motif CTCASVDCTGBSTGHCCTSGAAS YYCMRSSACASYCARR YCYCASVACWSBCWGDCCTSGAAS Direction: Forward Position #: 2 Overlap #: 15 Alignment: -CTCASVDCTGBSTGHCCTSGAAS YYCMRSSACASYCARR-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C015 Reverse Complement Original Motif STTCSAGGDCWGBSWGTVSTGMGM DVAGCCWKGGCTACAVAGCK DSDKCCAGGDCTRCMHRGVBTGMGM Direction: Forward Position #: 2 Overlap #: 19 Alignment: -STTCSAGGDCWGBSWGTVSTGMGM DVAGCCWKGGCTACAVAGCK----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 131 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C131 C080 Original Motif Original Motif WWAADAARVHAAWW WWAAVAAMMHAAWW WWAADAAAVHAAWW Direction: Forward Position #: 1 Overlap #: 14 Alignment: WWAADAARVHAAWW WWAAVAAMMHAAWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C010 Combined Motif Reverse Complement Reverse Complement WWTTHBTTTDTTWW WWTTTTTTTTTTWWTTTTWWW WWTTHTTTTTTTTTWWTTTTWWW Direction: Forward Position #: 3 Overlap #: 12 Alignment: WWTTHBTTTDTTWW--------- --WWTTTTTTTTTTWWTTTTWWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C016 Combined Motif Reverse Complement Original Motif WWWAAAAWWAAAAAAAAAHAAWW HWAAWAAAHWAAMAWAMAAWW WWAAAAAWHWAAMAAAMAAAWWW Direction: Forward Position #: 1 Overlap #: 21 Alignment: WWWAAAAWWAAAAAAAAAHAAWW HWAAWAAAHWAAMAWAMAAWW-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C067 Combined Motif Reverse Complement Reverse Complement WWWTTTYTTTYTTWHWTTTTTWW DTTTRKTTTTTTDW WWWWTTTDTTTTTTTWTTTTTWW Direction: Forward Position #: 4 Overlap #: 14 Alignment: WWWTTTYTTTYTTWHWTTTTTWW ---DTTTRKTTTTTTDW------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C001 Combined Motif Reverse Complement Original Motif WWAAAAAWAAAAAAADAAAWWWW WWWAAAAAWWAAAAAWAAAAAWWAAAAHWW WWAAWAAAAAAAAAAAAAAWAAAAAWWAAAAHWW Direction: Forward Position #: 5 Overlap #: 19 Alignment: WWAAAAAWAAAAAAADAAAWWWW----------- ----WWWAAAAAWWAAAAAWAAAAAWWAAAAHWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 132 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C132 C013 Reverse Complement Original Motif WCCTKGWTCTCWCMCTGW WVCTGGAACTCACTHTGTAGACCAGGM WVCTGGAACTCMYTBTGYWSACCMKGH Direction: Forward Position #: 10 Overlap #: 18 Alignment: ---------WCCTKGWTCTCWCMCTGW WVCTGGAACTCACTHTGTAGACCAGGM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C036 Combined Motif Reverse Complement Reverse Complement HCYYGGTSWKCABAMRGAGTTCCAGVW RRCTRRRTCTCRRRCTRY HCYYRGHBDDVWCDMRGRSTDCCAGVW Direction: Forward Position #: 5 Overlap #: 18 Alignment: HCYYGGTSWKCABAMRGAGTTCCAGVW ----RRCTRRRTCTCRRRCTRY----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C012 Original Motif Original Motif HCYYRGHBDDVWCDMRGRSTDCCAGVW MKAGAGMKAGAGAGAGAKM HBHBRGMKAGADMDAGRDVTDCCAGVW Direction: Forward Position #: 1 Overlap #: 19 Alignment: HCYYRGHBDDVWCDMRGRSTDCCAGVW MKAGAGMKAGAGAGAGAKM-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C053 Original Motif Original Motif HBHBRGMKAGADMDAGRDVTDCCAGVW RMACRGAGAAAYCCTGKY VHACRGAGARABCBWGDBVTDCCAGVW Direction: Forward Position #: 1 Overlap #: 18 Alignment: HBHBRGMKAGADMDAGRDVTDCCAGVW RMACRGAGAAAYCCTGKY--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C017 Original Motif Original Motif VHACRGAGARABCBWGDBVTDCCAGVW WSWGAGASWSAGAGASWS HBASRGAGARABMBAGWBVTDCCAGVW Direction: Forward Position #: 1 Overlap #: 18 Alignment: VHACRGAGARABCBWGDBVTDCCAGVW WSWGAGASWSAGAGASWS--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 133 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C133 C057 Original Motif Original Motif AWMAWHDACACHRWMAW WRMARYAAMARYAAMAWH HWWMAWHAACAVHAAMAW Direction: Backward Position #: 2 Overlap #: 17 Alignment: AWMAWHDACACHRWMAW- WRMARYAAMARYAAMAWH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C032 Original Motif Original Motif HWWMAWHAACAVHAAMAW HWAAWYDAAAMWRWAMWR HWAAAHHAAMAHDWAMAW Direction: Forward Position #: 1 Overlap #: 18 Alignment: HWWMAWHAACAVHAAMAW HWAAWYDAAAMWRWAMWR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C062 Combined Motif Original Motif Original Motif HWAAAHHAAMAHDWAMAW WWAMAWRMAMAYWAAHWW HWAAWAHAAAMAHAHWAAHWW Direction: Forward Position #: 4 Overlap #: 15 Alignment: HWAAAHHAAMAHDWAMAW--- ---WWAMAWRMAMAYWAAHWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C030 Combined Motif Original Motif Original Motif HWAAWAHAAAMAHAHWAAHWW WYAAAAAMAAAAAAAAWAM WHAAAAAAAAMAAAAAWAMWW Direction: Forward Position #: 1 Overlap #: 19 Alignment: HWAAWAHAAAMAHAHWAAHWW WYAAAAAMAAAAAAAAWAM-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C001 Combined Motif Original Motif Original Motif WHAAAAAAAAMAAAAAWAMWW WWWAAAAAWWAAAAAWAAAAAWWAAAAHWW WHAAWWAAAAAAAAAAAAAWWAAAAWWAAAAHWW Direction: Forward Position #: 5 Overlap #: 17 Alignment: WHAAAAAAAAMAAAAAWAMWW------------- ----WWWAAAAAWWAAAAAWAAAAAWWAAAAHWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 134 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C134 C003 Reverse Complement Reverse Complement GGGSGGGGBGG GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC KGGVMGGSHGKGSCGGGSBGGGBGGGSSGG Direction: Backward Position #: 15 Overlap #: 11 Alignment: -----GGGSGGGGBGG-------------- GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C008 Original Motif Reverse Complement KGGVMGGSHGKGSCGGGSBGGGBGGGSSGG SSGGSSGGGGSSGGSS SSGGVVGGGVGKGGCGGGSBGGGBGGGSSGG Direction: Forward Position #: 2 Overlap #: 15 Alignment: -KGGVMGGSHGKGSCGGGSBGGGBGGGSSGG SSGGSSGGGGSSGGSS--------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C104 Combined Motif Original Motif Reverse Complement SSGGVVGGGVGKGGCGGGSBGGGBGGGSSGG SSGGHGGGGKGGSS SSGGVVGGGDGGGSCGGGSBGGGBGGGSSGG Direction: Forward Position #: 1 Overlap #: 14 Alignment: SSGGVVGGGVGKGGCGGGSBGGGBGGGSSGG SSGGHGGGGKGGSS----------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C020 Combined Motif Reverse Complement Original Motif CCSSCCCBCCCBSCCCGSCCCHCCCVVCCSS BSCVCCSCCVCSCCCACS CCSSCCBSCCCCSCCCSSCCCHCCCVVCCSS Direction: Forward Position #: 7 Overlap #: 18 Alignment: CCSSCCCBCCCBSCCCGSCCCHCCCVVCCSS ------BSCVCCSCCVCSCCCACS------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C023 Reverse Complement Reverse Complement SSGGVVGGGDGGGSSGGGSGGGGSBGGSSGG SSGGSGDBGSGGSS SSGGSDGGGVGGSSSGGGSGGGGSBGGSSGG Direction: Forward Position #: 1 Overlap #: 14 Alignment: SSGGVVGGGDGGGSSGGGSGGGGSBGGSSGG SSGGSGDBGSGGSS----------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 135 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C135 C042 Original Motif Original Motif KKCCKAGMACBMASMM WGTCCKRGAACYMACTCW WGTCCKRGAACYMACWCW Direction: Forward Position #: 2 Overlap #: 16 Alignment: -KKCCKAGMACBMASMM- WGTCCKRGAACYMACTCW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C007 Reverse Complement Original Motif WGWGTYMGTTCKYGGACW KTTSTGAGTTCVAGGMCAGCCTS DDWSTBAGTTCBHGGACAGCCTS Direction: Forward Position #: 1 Overlap #: 18 Alignment: WGWGTYMGTTCKYGGACW----- KTTSTGAGTTCVAGGMCAGCCTS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C105 Reverse Complement Reverse Complement SAGGCTGTCCHVGAACTBASWDD TVGGRYGGSBRRGGCA TSDGGCKGBCVDGGMACTBASWDD Direction: Forward Position #: 2 Overlap #: 15 Alignment: -SAGGCTGTCCHVGAACTBASWDD TVGGRYGGSBRRGGCA-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C019 Reverse Complement Original Motif DDWSTBAGTYCCDVGBCRGCCHSA MWYCCCAGCACTTGGGAGGCAG HDYCYBAGYACYBGGGMGGCVVSA Direction: Forward Position #: 1 Overlap #: 22 Alignment: DDWSTBAGTYCCDVGBCRGCCHSA MWYCCCAGCACTTGGGAGGCAG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C077 Combined Motif Reverse Complement Original Motif TSVVGCCYCCCVMGTKCTBMGMDH SBCCCCGGSSCCCCCB TSVVGSVYCCCVVGBBCYSCSMDH Direction: Forward Position #: 6 Overlap #: 16 Alignment: TSVVGCCYCCCVMGTKCTBMGMDH -----SBCCCCGGSSCCCCCB--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 136 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C136 C077 Original Motif Reverse Complement GDGGVKSMHGGGRMT BGGGGGSSCCGGGGBS SGGGGGKSCCSGGRVY Direction: Backward Position #: 2 Overlap #: 15 Alignment: GDGGVKSMHGGGRMT- BGGGGGSSCCGGGGBS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C140 Combined Motif Reverse Complement Reverse Complement MVMCCSGGSYCCCCCS CVDMGGBSSSVGBGGSB MVMCCVVGSYSCCVSSGGSB Direction: Forward Position #: 4 Overlap #: 13 Alignment: MVMCCSGGSYCCCCCS---- ---CVDMGGBSSSVGBGGSB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Reverse Complement Reverse Complement BSCCSSVGGSKSCVVGGRVY GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC BSCCGSVGGGGSSVGGGGBBKGGVMGGSHGKGSC Direction: Forward Position #: 5 Overlap #: 16 Alignment: BSCCSSVGGSKSCVVGGRVY-------------- ----GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C022 Combined Motif Reverse Complement Original Motif GSCYCHSCCYVCCYBBCCCCVSSCCCCVSCGGSB BGCCYCBGSCYCCCSVS GSCYCBSCCYBCSCBYCCCCVSSCCCCVSCGGSB Direction: Forward Position #: 6 Overlap #: 17 Alignment: GSCYCHSCCYVCCYBBCCCCVSSCCCCVSCGGSB -----BGCCYCBGSCYCCCSVS------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C071 Combined Motif Reverse Complement Original Motif BSCCGSVGGGGSSVGGGGKBGSGBMGGSVGKGSC SVCCACSVSCACCBS SBCCVCSSGSDCCVSGGGKBGSGBMGGSVGKGSC Direction: Forward Position #: 1 Overlap #: 15 Alignment: BSCCGSVGGGGSSVGGGGKBGSGBMGGSVGKGSC SVCCACSVSCACCBS------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 137 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C137 C123 Original Motif Original Motif RAAYTCAGRAAY GAAMTCWGAAATC RAAYTCAGAAATC Direction: Forward Position #: 1 Overlap #: 12 Alignment: RAAYTCAGRAAY- GAAMTCWGAAATC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C053 Original Motif Original Motif RAAYTCAGAAATC RMACRGAGAAAYCCTGKY RAACWSAGAAAYCCTGKY Direction: Forward Position #: 1 Overlap #: 13 Alignment: RAAYTCAGAAATC----- RMACRGAGAAAYCCTGKY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C056 Combined Motif Reverse Complement Reverse Complement MRCAGGMTTTCTSWGTTM HWTTYTKWMTTTYWT MRCWKKHTTTCTBTBTTM Direction: Forward Position #: 3 Overlap #: 15 Alignment: MRCAGGMTTTCTSWGTTM --HWTTYTKWMTTTYWT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C111 Combined Motif Original Motif Reverse Complement MRCWKKHTTTCTBTBTTM YSGAWKTCAGMWATBA MRCWBKATKTCWGHDWTVA Direction: Forward Position #: 4 Overlap #: 15 Alignment: MRCWKKHTTTCTBTBTTM- ---YSGAWKTCAGMWATBA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C142 Original Motif Reverse Complement MRCWBKATKTCWGHDWTVA WWTTTTAWTTTTTHW HABTKKAWTTYTKHWWTVA Direction: Forward Position #: 1 Overlap #: 15 Alignment: MRCWBKATKTCWGHDWTVA WWTTTTAWTTTTTHW---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 138 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C138 C064 Original Motif Original Motif AAGAAARSAAG DAAAKAAAAMAAK DAAAKAAAAVAAD Direction: Forward Position #: 3 Overlap #: 11 Alignment: --AAGAAARSAAG DAAAKAAAAMAAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C067 Combined Motif Reverse Complement Reverse Complement HTTVTTTTYTTTD DTTTRKTTTTTTDW HTTDTTTTTTTTTTDW Direction: Forward Position #: 3 Overlap #: 11 Alignment: HTTVTTTTYTTTD--- --DTTTRKTTTTTTDW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C043 Reverse Complement Original Motif WDAAAAAAAAAADAAD WWAAWAAAAAARAATW WWAAWAAAAAARAAAD Direction: Forward Position #: 1 Overlap #: 16 Alignment: WDAAAAAAAAAADAAD WWAAWAAAAAARAATW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C131 Original Motif Original Motif WWAAWAAAAAARAAAD WWAADAARVHAAWW WWAADAAAADAAWAAD Direction: Forward Position #: 1 Overlap #: 14 Alignment: WWAAWAAAAAARAAAD WWAADAARVHAAWW-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C018 Combined Motif Reverse Complement Reverse Complement DTTWTTDTTTTDTTWW THTTTTTTTMYTT DTTTTTTTTTTTHTTW Direction: Forward Position #: 4 Overlap #: 13 Alignment: DTTWTTDTTTTDTTWW ---THTTTTTTTMYTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 139 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C139 C031 Original Motif Original Motif WWMAAABWWWVAAAAWW WHAAAMRWWYAAAMAWW WWAAAAVWWWVAAAAWW Direction: Backward Position #: 1 Overlap #: 17 Alignment: WWMAAABWWWVAAAAWW WHAAAMRWWYAAAMAWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C001 Combined Motif Reverse Complement Reverse Complement WWTTTTBWWWBTTTTWW WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW WWTTTTTWTTDTTTTTTWTTTTTWWTTTTTWWW Direction: Forward Position #: 4 Overlap #: 14 Alignment: WWTTTTBWWWBTTTTWW---------------- ---WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C010 Combined Motif Reverse Complement Original Motif WWWAAAAAWWAAAAAWAAAAAADAAWAAAAAWW WWWAAAAWWAAAAAAAAAAWW WWWAAAAWWWAAAAWWAAAAAAAAAAAWAAAWW Direction: Forward Position #: 8 Overlap #: 21 Alignment: WWWAAAAAWWAAAAAWAAAAAADAAWAAAAAWW -------WWWAAAAWWAAAAAAAAAAWW----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C069 Combined Motif Reverse Complement Reverse Complement WWTTTWTTTTTTTTTTTWWTTTTWWWTTTTWWW DHTTYTTMDWMTTYTTHT WWTTTTTWTTHTTTTTWWWTTTTWWWTTTTWWW Direction: Forward Position #: 1 Overlap #: 18 Alignment: WWTTTWTTTTTTTTTTTWWTTTTWWWTTTTWWW DHTTYTTMDWMTTYTTHT--------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C016 Combined Motif Reverse Complement Original Motif WWWAAAAWWWAAAAWWWAAAAAHAAWAAAAAWW HWAAWAAAHWAAMAWAMAAWW WWWAAAAWWAAAAAAHWAAMAAAAAWAWAAAWW Direction: Forward Position #: 8 Overlap #: 21 Alignment: WWWAAAAWWWAAAAWWWAAAAAHAAWAAAAAWW -------HWAAWAAAHWAAMAWAMAAWW----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 140 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C140 C022 Original Motif Original Motif BSCCBCVSSSBCCYHVG BGCCYCBGSCYCCCSVS BSCCYCVGSSBCCYVVS Direction: Forward Position #: 1 Overlap #: 17 Alignment: BSCCBCVSSSBCCYHVG BGCCYCBGSCYCCCSVS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C004 Combined Motif Original Motif Original Motif BSCCYCVGSSBCCYVVS SSSSSCSSSSSCCSSSSCCSCSSSSSS BSCCBCSSSSSCCCCCSSSSCCSCSSSSSS Direction: Forward Position #: 4 Overlap #: 14 Alignment: BSCCYCVGSSBCCYVVS------------- ---SSSSSCSSSSSCCSSSSCCSCSSSSSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Reverse Complement Reverse Complement SSSSSSGSGGSSSSGGGGGSSSSSGBGGSB GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC SSSGSSGGGGGSSGGGGGGBGGSVGGSBGKGSC Direction: Forward Position #: 4 Overlap #: 27 Alignment: SSSSSSGSGGSSSSGGGGGSSSSSGBGGSB--- ---GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C037 Combined Motif Original Motif Reverse Complement SSSGSSGGGGGSSGGGGGGBGGSVGGSBGKGSC BVGGYGKSGGYGBCGGVS SSGGBGGSGGBGSSGGVSGBGGSVGGSBGKGSC Direction: Forward Position #: 1 Overlap #: 18 Alignment: SSSGSSGGGGGSSGGGGGGBGGSVGGSBGKGSC BVGGYGKSGGYGBCGGVS--------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C020 Combined Motif Original Motif Reverse Complement SSGGBGGSGGBGSSGGVSGBGGSVGGSBGKGSC SGTGGGSGVGGSGGVGSB SSBGGGSGGGGSGGVGSSGBGGSVGGSBGKGSC Direction: Forward Position #: 1 Overlap #: 18 Alignment: SSGGBGGSGGBGSSGGVSGBGGSVGGSBGKGSC SGTGGGSGVGGSGGVGSB--------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 141 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C141 C066 Original Motif Original Motif YMATCCYRSYRCTTGKR MAMTCCCMSKGCCTCTK HAMTCCYVSTRCYTSTD Direction: Backward Position #: 1 Overlap #: 17 Alignment: YMATCCYRSYRCTTGKR MAMTCCCMSKGCCTCTK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C086 Original Motif Reverse Complement HAMTCCYVSTRCYTSTD CSTSCCYCWGRCTCCSG CVHBCCYCBKRCYYCBG Direction: Forward Position #: 1 Overlap #: 17 Alignment: HAMTCCYVSTRCYTSTD CSTSCCYCWGRCTCCSG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C019 Combined Motif Original Motif Original Motif CVHBCCYCBKRCYYCBG MWYCCCAGCACTTGGGAGGCAG CVHDCCCCAGSMCTBGGGAGGCAG Direction: Forward Position #: 3 Overlap #: 15 Alignment: CVHBCCYCBKRCYYCBG------- --MWYCCCAGCACTTGGGAGGCAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C011 Reverse Complement Reverse Complement CTGCCTCCCBAGYSCTGGGGDHVG RRTCTCTCTCRRTCTCRR RMTSYCTCYCDAKCBCDRGGGDHVG Direction: Forward Position #: 2 Overlap #: 17 Alignment: -CTGCCTCCCBAGYSCTGGGGDHVG RRTCTCTCTCRRTCTCRR------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C122 Original Motif Original Motif RMTSYCTCYCDAKCBCDRGGGDHVG YAGCCCWGSCWSBCCTR VAKCCCTSBCDVKCCYDRGGGDHVG Direction: Forward Position #: 1 Overlap #: 17 Alignment: RMTSYCTCYCDAKCBCDRGGGDHVG YAGCCCWGSCWSBCCTR-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 142 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C142 C001 Original Motif Original Motif WHAAAAAWTAAAAWW WWWAAAAAWWAAAAAWAAAAAWWAAAAHWW WWWAAAAAWWAAAAAWAAAAAWWAAAAHWW Direction: Forward Position #: 15 Overlap #: 15 Alignment: --------------WHAAAAAWTAAAAWW- WWWAAAAAWWAAAAAWAAAAAWWAAAAHWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C139 Combined Motif Original Motif Original Motif WWWAAAAAWWAAAAAWAAAAAWWAAAAHWW WWMAAABWWWVAAAAWW WWWAAAWWAAAAAAWWVAAAAWWAAAAHWW Direction: Forward Position #: 7 Overlap #: 17 Alignment: WWWAAAAAWWAAAAAWAAAAAWWAAAAHWW ------WWMAAABWWWVAAAAWW------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C010 Combined Motif Original Motif Original Motif WWWAAAWWAAAAAAWWVAAAAWWAAAAHWW WWWAAAAWWAAAAAAAAAAWW WWWAAAAWWAAAAAAAHAAAWWWAAAAHWW Direction: Forward Position #: 1 Overlap #: 21 Alignment: WWWAAAWWAAAAAAWWVAAAAWWAAAAHWW WWWAAAAWWAAAAAAAAAAWW--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C016 Original Motif Original Motif WWWAAAAWWAAAAAAAHAAAWWWAAAAHWW HWAAWAAAHWAAMAWAMAAWW HWAAWAAAMAAAMAAAMAAAHAAAWWWAAAAHWW Direction: Forward Position #: 5 Overlap #: 17 Alignment: ----WWWAAAAWWAAAAAAAHAAAWWWAAAAHWW HWAAWAAAHWAAMAWAMAAWW------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C030 Combined Motif Original Motif Original Motif HWAAWAAAMAAAMAAAMAAAHAAAWWWAAAAHWW WYAAAAAMAAAAAAAAWAM WWAAWAAAAAAAAAAAHAAAHAAAWWWAAAAHWW Direction: Forward Position #: 1 Overlap #: 19 Alignment: HWAAWAAAMAAAMAAAMAAAHAAAWWWAAAAHWW WYAAAAAMAAAAAAAAWAM--------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 143 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C143 C009 Reverse Complement Original Motif RRTTAAYSSRAGCARY ABGCCTTTAATCCCAGCACTHR ABRVYTWWHRBVMSMRVHCTHR Direction: Forward Position #: 3 Overlap #: 16 Alignment: --RRTTAAYSSRAGCARY---- ABGCCTTTAATCCCAGCACTHR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C083 Reverse Complement Reverse Complement MHAGHVKYSYVVKHWWAKVMBT CYRGAGSMKSAGGBRG MHAGAGBHBBVGKHWKAKVMBT Direction: Forward Position #: 1 Overlap #: 16 Alignment: MHAGHVKYSYVVKHWWAKVMBT CYRGAGSMKSAGGBRG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C010 Reverse Complement Reverse Complement ABRVYTYWHYCBBBDBCTCTDR WWTTTTTTTTTTWWTTTTWWW WWTTDTKBYTTTHHYTYYDHHTCTDR Direction: Forward Position #: 5 Overlap #: 17 Alignment: ----ABRVYTYWHYCBBBDBCTCTDR WWTTTTTTTTTTWWTTTTWWW----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C057 Original Motif Reverse Complement WWTTDTKBYTTTHHYTYYDHHTCTDR HWTRTTMKTYTTMKTYKW HWWDTTHTTYTTHTTYBTYYDHHTCTDR Direction: Forward Position #: 3 Overlap #: 16 Alignment: --WWTTDTKBYTTTHHYTYYDHHTCTDR HWTRTTMKTYTTMKTYKW---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C007 Combined Motif Original Motif Original Motif HWWDTTHTTYTTHTTYBTYYDHHTCTDR KTTSTGAGTTCVAGGMCAGCCTS HWWDTTHTTYTTHTTYBTYYDHHBYKAGTTCVAGGMCAGCCTS Direction: Forward Position #: 21 Overlap #: 8 Alignment: HWWDTTHTTYTTHTTYBTYYDHHTCTDR--------------- --------------------KTTSTGAGTTCVAGGMCAGCCTS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 144 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C144 C005 Original Motif Original Motif GACCAGRSYRGYCTC TCTGTAGMCCAGGCTGGCCTYGW GWGACCAGGCTGGCCTCTCTGTA Direction: Backward Position #: 3 Overlap #: 15 Alignment: ------GACCAGRSYRGYCTC-- TCTGTAGMCCAGGCTGGCCTYGW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C126 Original Motif Original Motif GWGACCAGGCTGGCCTCTCTGTA SVWGRCSMKSCTGGYS SRWGRCCAGGCTGGYCTCTCTGTA Direction: Forward Position #: 2 Overlap #: 15 Alignment: -GWGACCAGGCTGGCCTCTCTGTA SVWGRCSMKSCTGGYS-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C073 Original Motif Original Motif SRWGRCCAGGCTGGYCTCTCTGTA YMWGSMYAGCCRKSKCTR BVWGVCCAGSCDGGBCTVTCTGTA Direction: Forward Position #: 1 Overlap #: 18 Alignment: SRWGRCCAGGCTGGYCTCTCTGTA YMWGSMYAGCCRKSKCTR------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C122 Original Motif Reverse Complement BVWGVCCAGSCDGGBCTVTCTGTA MAGGVSWGSCWGGGCTK VAGGVCHRGCHKGGCYKVTCTGTA Direction: Forward Position #: 1 Overlap #: 17 Alignment: BVWGVCCAGSCDGGBCTVTCTGTA MAGGVSWGSCWGGGCTK------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C124 Reverse Complement Reverse Complement TACAGAVRMGCCYDGCMHGVCCTV WSGASKSCAGCSMSGTSW TRSAGDSMAGCCMVGYVHGVCCTV Direction: Forward Position #: 1 Overlap #: 18 Alignment: TACAGAVRMGCCYDGCMHGVCCTV WSGASKSCAGCSMSGTSW------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 145 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C145 C133 Original Motif Original Motif WWCADCAMCHAMWW AWMAWHDACACHRWMAW MAWWWMAWCAMCAMMDW Direction: Backward Position #: 4 Overlap #: 14 Alignment: WWCADCAMCHAMWW--- AWMAWHDACACHRWMAW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C131 Reverse Complement Reverse Complement WDRYTGYTGWTRWWWTY WWTTHBKTTDTTWW WWTTHKTTKDTKWWWTY Direction: Forward Position #: 1 Overlap #: 14 Alignment: WDRYTGYTGWTRWWWTY WWTTHBKTTDTTWW--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C057 Combined Motif Reverse Complement Original Motif MAWWWRADRAAYHAAWW WRMARYAAMARYAAMAWH MAWWWAADHAAMAAHAAMAWH Direction: Forward Position #: 4 Overlap #: 14 Alignment: MAWWWRADRAAYHAAWW---- ---WRMARYAAMARYAAMAWH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C080 Combined Motif Original Motif Original Motif MAWWWAADHAAMAAHAAMAWH WWAAVAAMMHAAWW MAWWWWAADAAMMHAAWHAWH Direction: Forward Position #: 5 Overlap #: 14 Alignment: MAWWWAADHAAMAAHAAMAWH ----WWAAVAAMMHAAWW--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C010 Combined Motif Original Motif Original Motif MAWWWWAADAAMMHAAWHAWH WWWAAAAWWAAAAAAAAAAWW HAWAAAAWWAAAAAAAAAAWW Direction: Forward Position #: 1 Overlap #: 21 Alignment: MAWWWWAADAAMMHAAWHAWH WWWAAAAWWAAAAAAAAAAWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 146 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C146 C015 Original Motif Original Motif YRGCSAGGGSTAYR DVAGCCWKGGCTACAVAGCK DHAGCCAGGGCTAYAVAGCK Direction: Forward Position #: 2 Overlap #: 14 Alignment: -YRGCSAGGGSTAYR----- DVAGCCWKGGCTACAVAGCK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C073 Original Motif Original Motif DHAGCCAGGGCTAYAVAGCK YMWGSMYAGCCRKSKCTR HMAGCCHRGSCDRCDCWGCK Direction: Forward Position #: 1 Overlap #: 18 Alignment: DHAGCCAGGGCTAYAVAGCK YMWGSMYAGCCRKSKCTR-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C005 Combined Motif Original Motif Reverse Complement HMAGCCHRGSCDRCDCWGCK WCKAGGCCAGCCTGGYCTACAGA HMAGHCDAGGCHAGVCWGSBCTACAGA Direction: Forward Position #: 5 Overlap #: 16 Alignment: HMAGCCHRGSCDRCDCWGCK------- ----WCKAGGCCAGCCTGGYCTACAGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C078 Reverse Complement Original Motif TCTGTAGVSCWGVCTDGCCTDGDCTRH YRGAYAGAGRGAYR TVKRTAGASMRRBVTDGCCTDGDCTRH Direction: Forward Position #: 1 Overlap #: 14 Alignment: TCTGTAGVSCWGVCTDGCCTDGDCTRH YRGAYAGAGRGAYR------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C153 Reverse Complement Original Motif HMAGHCDAGGCHAVVKMRSTCTAMRVA YYAGRVTGGCBYTGR YHAGVVTRGSCBDGRKMRSTCTAMRVA Direction: Forward Position #: 1 Overlap #: 15 Alignment: HMAGHCDAGGCHAVVKMRSTCTAMRVA YYAGRVTGGCBYTGR------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 147 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C147 C015 Reverse Complement Reverse Complement CKCTGYGTAGYCCWKG RGCTVTGTAGCCYWGGCTVD VKCTGYGTAGYCCWGGCTVD Direction: Forward Position #: 1 Overlap #: 16 Alignment: CKCTGYGTAGYCCWKG---- RGCTVTGTAGCCYWGGCTVD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C013 Combined Motif Reverse Complement Reverse Complement DVAGCCWGGKCTACMCAGYV YCCTGGTCTACADAGTGAGTTCCAGVW DVABCCTGGTCTACABAGTGAGTTCCAGVW Direction: Forward Position #: 4 Overlap #: 17 Alignment: DVAGCCWGGKCTACMCAGYV---------- ---YCCTGGTCTACADAGTGAGTTCCAGVW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C034 Combined Motif Original Motif Reverse Complement DVABCCTGGTCTACABAGTGAGTTCCAGVW SCTCTRSCTCCSCAGTGS DSMKCYDGSTCYVCAGWGBGAGTTCCAGVW Direction: Forward Position #: 2 Overlap #: 18 Alignment: DVABCCTGGTCTACABAGTGAGTTCCAGVW -SCTCTRSCTCCSCAGTGS----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C019 Original Motif Original Motif DSMKCYDGSTCYVCAGWGBGAGTTCCAGVW MWYCCCAGCACTTGGGAGGCAG HHHYCYAGCWCTDSRGAGGSAGTTCCAGVW Direction: Forward Position #: 1 Overlap #: 22 Alignment: DSMKCYDGSTCYVCAGWGBGAGTTCCAGVW MWYCCCAGCACTTGGGAGGCAG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C012 Combined Motif Original Motif Original Motif HHHYCYAGCWCTDSRGAGGSAGTTCCAGVW MKAGAGMKAGAGAGAGAKM HHHYCYVGVDMKVBRGAGVSAGWTCCAGVW Direction: Forward Position #: 7 Overlap #: 19 Alignment: HHHYCYAGCWCTDSRGAGGSAGTTCCAGVW ------MKAGAGMKAGAGAGAGAKM----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 148 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C148 C020 Original Motif Original Motif SCMSBGACACHGSCAS BSCVCCSCCVCSCCCACS BSCMCCGMCACBSCCASS Direction: Forward Position #: 2 Overlap #: 16 Alignment: -SCMSBGACACHGSCAS- BSCVCCSCCVCSCCCACS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C125 Reverse Complement Reverse Complement SSTGGSBGTGYCGGYGSB SYSTWKCTSTMWSTRS SBSTRGSKSTRYSKGBGSB Direction: Forward Position #: 2 Overlap #: 15 Alignment: -SSTGGSBGTGYCGGYGSB SYSTWKCTSTMWSTRS--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C004 Original Motif Reverse Complement SBSTRGSKSTRYSKGBGSB SSSSSSGSGGSSSSGGSSSSSGSSSSS SSSSBGGSKGBSBSKGSGSSSGSSSSS Direction: Forward Position #: 2 Overlap #: 19 Alignment: -SBSTRGSKSTRYSKGBGSB------- SSSSSSGSGGSSSSGGSSSSSGSSSSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C128 Combined Motif Reverse Complement Reverse Complement SSSSSCSSSCSCYSBSVCYSCCVSSSS SKTCSMSGACASKSAGMS SBBCSCSGVCVSBSDSMCYSCCVSSSS Direction: Forward Position #: 1 Overlap #: 18 Alignment: SSSSSCSSSCSCYSBSVCYSCCVSSSS SKTCSMSGACASKSAGMS--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C037 Combined Motif Reverse Complement Original Motif SSSSBGGSKGYSDSVSBGBCSGSGVBS SVCCGBCMCCSYCMCCVB SSSSBGVCBGBCHCMSBSHCCGSGVBS Direction: Forward Position #: 6 Overlap #: 18 Alignment: SSSSBGGSKGYSDSVSBGBCSGSGVBS -----SVCCGBCMCCSYCMCCVB---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 149 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C149 C007 Original Motif Reverse Complement TKAACTCAGRMR SAGGCTGYCCTVGAACTCASAAY BDRRCTSWSMHRGAACTCASAAY Direction: Forward Position #: 1 Overlap #: 12 Alignment: TKAACTCAGRMR----------- SAGGCTGYCCTVGAACTCASAAY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C111 Original Motif Reverse Complement BDRRCTSWSMHRGAACTCASAAY YSGAWKTCAGMWATBA YBKADBTCAGMWRKVACTCASAAY Direction: Forward Position #: 2 Overlap #: 15 Alignment: -BDRRCTSWSMHRGAACTCASAAY YSGAWKTCAGMWATBA-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C013 Reverse Complement Reverse Complement KTTSTGAGTBYKWRCTGABDTYBM YCCTGGTCTACADAGTGAGTTCCAGVW BYYTKGWSTHCWDASTGAGTTCCAGVW Direction: Forward Position #: 1 Overlap #: 24 Alignment: KTTSTGAGTBYKWRCTGABDTYBM--- YCCTGGTCTACADAGTGAGTTCCAGVW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C011 Reverse Complement Reverse Complement WVCTGGAACTCASTDWGHASWCYAKKV RRTCTCTCTCRRTCTCRR RRBCTBKMWCDVWCTHDGHASWCYAKKV Direction: Forward Position #: 2 Overlap #: 17 Alignment: -WVCTGGAACTCASTDWGHASWCYAKKV RRTCTCTCTCRRTCTCRR---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C099 Reverse Complement Reverse Complement BYYTKGWSTHCDDAGWVDGWYYBAGVKM RKTCCRGAGTGCYGGGKR RKTCYDGAGTRCBGRGKRDGWYYBAGVKM Direction: Forward Position #: 2 Overlap #: 17 Alignment: -BYYTKGWSTHCDDAGWVDGWYYBAGVKM RKTCCRGAGTGCYGGGKR----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 150 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C150 C128 Reverse Complement Original Motif KKTGKSTGTSSKRGMM SYCTSRSTGTCSYSGARS SKBTGDSTGTCSTVGAAS Direction: Forward Position #: 2 Overlap #: 16 Alignment: -KKTGKSTGTSSKRGMM- SYCTSRSTGTCSYSGARS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C028 Reverse Complement Reverse Complement STTCVASGACASHCABRS VBTSVCTSTGSSTCVB SBTSVVBSWSVSTCABRS Direction: Forward Position #: 1 Overlap #: 16 Alignment: STTCVASGACASHCABRS VBTSVCTSTGSSTCVB-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C037 Combined Motif Reverse Complement Reverse Complement SKBTGASBSWSVVVSAVS BVGGYGKSGGYGBCGGVS SKBBSRGYGDSRGBGVMGGVS Direction: Forward Position #: 4 Overlap #: 15 Alignment: SKBTGASBSWSVVVSAVS--- ---BVGGYGKSGGYGBCGGVS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C002 Combined Motif Reverse Complement Original Motif SVCCRBCBCMSDCMCMSVBRS TAYRYACACACACACACRYAYRY SVCCDDCRCASACACACACACRYAYRY Direction: Forward Position #: 5 Overlap #: 17 Alignment: SVCCRBCBCMSDCMCMSVBRS------ ----TAYRYACACACACACACRYAYRY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C042 Original Motif Original Motif SVCCDDCRCASACACACACACRYAYRY WGTCCKRGAACYMACTCW WGBCCBDGMACHMACWCACACACRYAYRY Direction: Forward Position #: 3 Overlap #: 16 Alignment: --SVCCDDCRCASACACACACACRYAYRY WGTCCKRGAACYMACTCW----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 151 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C151 C007 Original Motif Reverse Complement SWGGCWGKCCWGGVWS SAGGCTGYCCTVGAACTCASAAY SAGGCTGBCSKVDRDCYHVGAAB Direction: Forward Position #: 8 Overlap #: 16 Alignment: -------SWGGCWGKCCWGGVWS SAGGCTGYCCTVGAACTCASAAY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C128 Combined Motif Original Motif Reverse Complement SAGGCTGBCSKVDRDCYHVGAAB SKTCSMSGACASKSAGMS SAGGCTKCBVBGRMACKVAGMHB Direction: Forward Position #: 5 Overlap #: 18 Alignment: SAGGCTGBCSKVDRDCYHVGAAB ----SKTCSMSGACASKSAGMS- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C096 Combined Motif Original Motif Reverse Complement SAGGCTKCBVBGRMACKVAGMHB RKGGCMMGSCKRGRKY SAGGVKKSCMVGVCDVKVDBMHB Direction: Forward Position #: 5 Overlap #: 16 Alignment: SAGGCTKCBVBGRMACKVAGMHB ----RKGGCMMGSCKRGRKY--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C107 Combined Motif Original Motif Reverse Complement SAGGVKKSCMVGVCDVKVDBMHB CDGGGBTTVMAGGVBHG SAGGCKGGSVBKVMDGGVDBVHB Direction: Forward Position #: 5 Overlap #: 17 Alignment: SAGGVKKSCMVGVCDVKVDBMHB ----CDGGGBTTVMAGGVBHG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C092 Reverse Complement Reverse Complement BDVVHVCCDRVYVVSCCRGCCTS KKTCGMSGCCASKCTGMM KKDCDMSSCCAVBMTGCCRGCCTS Direction: Forward Position #: 2 Overlap #: 17 Alignment: -BDVVHVCCDRVYVVSCCRGCCTS KKTCGMSGCCASKCTGMM------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 152 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C152 C079 Original Motif Original Motif KWRRKWRARAWMRAWM ADAAAKWAAAAWAKARW DAAAKWAAAAWADAAAA Direction: Backward Position #: 1 Overlap #: 16 Alignment: -KWRRKWRARAWMRAWM ADAAAKWAAAAWAKARW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C043 Original Motif Original Motif DAAAKWAAAAWADAAAA WWAAWAAAAAARAATW WAAADWAAAAWVRAWWA Direction: Forward Position #: 1 Overlap #: 16 Alignment: DAAAKWAAAAWADAAAA WWAAWAAAAAARAATW- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C016 Combined Motif Original Motif Original Motif WAAADWAAAAWVRAWWA HWAAWAAAHWAAMAWAMAAWW WAAHWAAAAAAHWAAMAWAMAAWW Direction: Forward Position #: 4 Overlap #: 14 Alignment: WAAADWAAAAWVRAWWA------- ---HWAAWAAAHWAAMAWAMAAWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C001 Combined Motif Reverse Complement Reverse Complement WWTTYTWTYTTWHTTTTTTWHTTW WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW WWTTYTWTTTTTHWTTTTTWTTTTTWWTTTTTWWW Direction: Forward Position #: 6 Overlap #: 19 Alignment: WWTTYTWTYTTWHTTTTTTWHTTW----------- -----WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C030 Combined Motif Original Motif Reverse Complement WWTTYTWTTTTTHWTTTTTWTTTTTWWTTTTTWWW YTWTTTTTTTTYTTTTTMW WWTTYHWWTTTTTTTTTTTWTTWWTWWTTTTTWWW Direction: Forward Position #: 6 Overlap #: 19 Alignment: WWTTYTWTTTTTHWTTTTTWTTTTTWWTTTTTWWW -----YTWTTTTTTTTYTTTTTMW----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 153 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C153 C092 Original Motif Original Motif YYAGRVTGGCBYTGR RYCAGRSTGGCSYCGARY RYCAGRSTGGCSYYGRRY Direction: Forward Position #: 2 Overlap #: 15 Alignment: -YYAGRVTGGCBYTGR-- RYCAGRSTGGCSYCGARY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C128 Reverse Complement Reverse Complement KKKCMMSGCCASKCTGMM SKTCSMSGACASKSAGMS BKTCVMSGMCASKCWGMM Direction: Forward Position #: 1 Overlap #: 18 Alignment: KKKCMMSGCCASKCTGMM SKTCSMSGACASKSAGMS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C150 Reverse Complement Original Motif RYCWGRSTGYCSYVGARB YYCMRSSACASYCARR BYCHRVSWSHCBCAGRRB Direction: Forward Position #: 1 Overlap #: 16 Alignment: RYCWGRSTGYCSYVGARB YYCMRSSACASYCARR-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C005 Combined Motif Original Motif Reverse Complement BYCHRVSWSHCBCAGRRB WCKAGGCCAGCCTGGYCTACAGA BHCDAGGHCASCCWGGDCTACAGA Direction: Forward Position #: 2 Overlap #: 17 Alignment: BYCHRVSWSHCBCAGRRB------ -WCKAGGCCAGCCTGGYCTACAGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C148 Original Motif Reverse Complement BHCDAGGHCASCCWGGDCTACAGA STGSCDGTGTCBSYGS BTSVVGGTSWSSCTGSDCTACAGA Direction: Forward Position #: 1 Overlap #: 16 Alignment: BHCDAGGHCASCCWGGDCTACAGA STGSCDGTGTCBSYGS-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Results created by MOTIFSIM on 11-19-2016 22:04:18 Runtime: 1193.59 seconds MOTIFSIM is written by Ngoc Tam L. 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