Best Matches in Database for Each Motif (Highest to Lowest)
Dataset #: 1 |
Motif ID: 1 |
Motif name: Motif 1 |
Original motif |
Reverse complement motif |
Consensus sequence: AGRKGGCR |
Consensus sequence: KGCCYKCT |
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Best Matches for Motif ID 1 (Highest to Lowest)
Motif ID: |
UP00002 |
Motif name: |
Sp4_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
BVVHAGGGGGCGRDHHB
----AGRKGGCR-----
Original motif |
Reverse complement motif |
Consensus sequence: BDHHMCGCCCCCTHVBB |
Consensus sequence: BVVHAGGGGGCGRDHHB |
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Motif ID: |
UP00079 |
Motif name: |
Esrra_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.0152094 |
Alignment:
VKBBAGGGGTCAHDBBH
----AGRKGGCR-----
Original motif |
Reverse complement motif |
Consensus sequence: VKBBAGGGGTCAHDBBH |
Consensus sequence: DBBHHTGACCCCTBBYV |
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Motif ID: |
UP00007 |
Motif name: |
Egr1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.0160089 |
Alignment:
VHTGCGGGGGCGGH
----AGRKGGCR--
Original motif |
Reverse complement motif |
Consensus sequence: HCCGCCCCCGCAHB |
Consensus sequence: VHTGCGGGGGCGGH |
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Motif ID: |
UP00010 |
Motif name: |
Tcfap2b_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.0244919 |
Alignment:
HTGCCMTVKGGCMD
-KGCCYKCT-----
Original motif |
Reverse complement motif |
Consensus sequence: DYGCCYBARGGCAH |
Consensus sequence: HTGCCMTVKGGCMD |
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Motif ID: |
UP00070 |
Motif name: |
Gcm1_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0.0267457 |
Alignment:
DDBVHATAGGGGRBRMB
-------AGRKGGCR--
Original motif |
Reverse complement motif |
Consensus sequence: DDBVHATAGGGGRBRMB |
Consensus sequence: BYMBKCCCCTATDVBHD |
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Dataset #: 1 |
Motif ID: 2 |
Motif name: Motif 2 |
Original motif |
Reverse complement motif |
Consensus sequence: AAAAHAAA |
Consensus sequence: TTTDTTTT |
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Best Matches for Motif ID 2 (Highest to Lowest)
Motif ID: |
UP00061 |
Motif name: |
Foxl1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
VVVWTTGTTTAMATTWD
---TTTDTTTT------
Original motif |
Reverse complement motif |
Consensus sequence: DWAATRTAAACAAWVVB |
Consensus sequence: VVVWTTGTTTAMATTWD |
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Motif ID: |
UP00062 |
Motif name: |
Sox4_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
7 |
Number of overlap: |
8 |
Similarity score: |
0.000495784 |
Alignment:
HBDDDAACAAAGRVBHH
---AAAAHAAA------
Original motif |
Reverse complement motif |
Consensus sequence: HBDDDAACAAAGRVBHH |
Consensus sequence: HHBBMCTTTGTTHDDBH |
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Motif ID: |
UP00030 |
Motif name: |
Sox11_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.000916442 |
Alignment:
HBDDRAACAAAGRABHH
---AAAAHAAA------
Original motif |
Reverse complement motif |
Consensus sequence: HBDDRAACAAAGRABHH |
Consensus sequence: HHBTMCTTTGTTMDDVH |
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Motif ID: |
UP00039 |
Motif name: |
Foxj3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.00246818 |
Alignment:
HDHADGTAAACAAAVVH
------AAAAHAAA---
Original motif |
Reverse complement motif |
Consensus sequence: HDHADGTAAACAAAVVH |
Consensus sequence: DVVTTTGTTTACDTHDH |
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Motif ID: |
UP00025 |
Motif name: |
Foxk1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
7 |
Number of overlap: |
8 |
Similarity score: |
0.00320862 |
Alignment:
DDAATGTAAACAAAVVB
------AAAAHAAA---
Original motif |
Reverse complement motif |
Consensus sequence: DDAATGTAAACAAAVVB |
Consensus sequence: BBVTTTGTTTACATTDD |
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Dataset #: 1 |
Motif ID: 3 |
Motif name: Motif 3 |
Original motif |
Reverse complement motif |
Consensus sequence: CACACACA |
Consensus sequence: TGTGTGTG |
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Best Matches for Motif ID 3 (Highest to Lowest)
Motif ID: |
UP00042 |
Motif name: |
Gm397_second |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
HBGYGTGTGTGCVRVD
---TGTGTGTG-----
Original motif |
Reverse complement motif |
Consensus sequence: DVMVGCACACACKCVH |
Consensus sequence: HBGYGTGTGTGCVRVD |
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Motif ID: |
UP00026 |
Motif name: |
Zscan4_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.0271943 |
Alignment:
BHHHTTGTGTGCKHVD
-----TGTGTGTG---
Original motif |
Reverse complement motif |
Consensus sequence: HVHRGCACACAAHHHV |
Consensus sequence: BHHHTTGTGTGCKHVD |
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Motif ID: |
UP00026 |
Motif name: |
Zscan4_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
9 |
Number of overlap: |
8 |
Similarity score: |
0.0336839 |
Alignment:
DHVDTGTGCACAYAHDH
--------CACACACA-
Original motif |
Reverse complement motif |
Consensus sequence: DHVDTGTGCACAYAHDH |
Consensus sequence: HDHTMTGTGCACADVHD |
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Motif ID: |
UP00000 |
Motif name: |
Smad3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
7 |
Number of overlap: |
8 |
Similarity score: |
0.0355485 |
Alignment:
HVHBVTGTCTGGDDHDD
---TGTGTGTG------
Original motif |
Reverse complement motif |
Consensus sequence: HDHDDCCAGACABBHVH |
Consensus sequence: HVHBVTGTCTGGDDHDD |
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Motif ID: |
UP00540 |
Motif name: |
Gli3_v015681_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
12 |
Number of overlap: |
8 |
Similarity score: |
0.0404116 |
Alignment:
ABBBBVVRGACCACCCACRDBBM
-----------CACACACA----
Original motif |
Reverse complement motif |
Consensus sequence: ABBBBVVRGACCACCCACRDBBM |
Consensus sequence: YBVDMGTGGGTGGTCKVVBVBBT |
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Dataset #: 1 |
Motif ID: 4 |
Motif name: Motif 4 |
Original motif |
Reverse complement motif |
Consensus sequence: TTTWWAW |
Consensus sequence: WTWWAAA |
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Best Matches for Motif ID 4 (Highest to Lowest)
Motif ID: |
UP00207 |
Motif name: |
Hoxb9 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
7 |
Similarity score: |
0 |
Alignment:
HDHHTTTTATRGCKMV
---TTTWWAW------
Original motif |
Reverse complement motif |
Consensus sequence: VRRGCMATAAAAHHHD |
Consensus sequence: HDHHTTTTATRGCKMV |
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Motif ID: |
UP00061 |
Motif name: |
Foxl1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
7 |
Similarity score: |
0.000691918 |
Alignment:
VVVWTTGTTTAMATTWD
-------TTTWWAW---
Original motif |
Reverse complement motif |
Consensus sequence: DWAATRTAAACAAWVVB |
Consensus sequence: VVVWTTGTTTAMATTWD |
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Motif ID: |
UP00134 |
Motif name: |
Hoxb13 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
7 |
Similarity score: |
0.00184871 |
Alignment:
VDHWTTTTATTGGDKB
---TTTWWAW------
Original motif |
Reverse complement motif |
Consensus sequence: VRHCCAATAAAAWHHV |
Consensus sequence: VDHWTTTTATTGGDKB |
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Motif ID: |
UP00213 |
Motif name: |
Hoxa9 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
7 |
Number of overlap: |
7 |
Similarity score: |
0.00275206 |
Alignment:
WDTAWTTTWATGKCCGD
----TTTWWAW------
Original motif |
Reverse complement motif |
Consensus sequence: DCGGYCATWAAAWTADW |
Consensus sequence: WDTAWTTTWATGKCCGD |
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Motif ID: |
UP00114 |
Motif name: |
Homez |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
2 |
Number of overlap: |
7 |
Similarity score: |
0.00499979 |
Alignment:
AHWWMATCGTTTTBADD
---------TTTWWAW-
Original motif |
Reverse complement motif |
Consensus sequence: AHWWMATCGTTTTBADD |
Consensus sequence: HDTVAAAACGATRWWHT |
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Dataset #: 1 |
Motif ID: 5 |
Motif name: Motif 5 |
Original motif |
Reverse complement motif |
Consensus sequence: CCCCDCCC |
Consensus sequence: GGGDGGGG |
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Best Matches for Motif ID 5 (Highest to Lowest)
Motif ID: |
UP00093 |
Motif name: |
Klf7_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
HBDRCCMCGCCCHHHD
----CCCCDCCC----
Original motif |
Reverse complement motif |
Consensus sequence: HBDRCCMCGCCCHHHD |
Consensus sequence: DHHDGGGCGRGGKHBH |
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Motif ID: |
UP00021 |
Motif name: |
Zfp281_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.0165797 |
Alignment:
GKRGGGGGGGGGGBD
-----GGGDGGGG--
Original motif |
Reverse complement motif |
Consensus sequence: DBCCCCCCCCCCMYC |
Consensus sequence: GKRGGGGGGGGGGBD |
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Motif ID: |
UP00022 |
Motif name: |
Zfp740_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.026633 |
Alignment:
BHHDYGGGGGGGGBVD
-----GGGDGGGG---
Original motif |
Reverse complement motif |
Consensus sequence: HVBCCCCCCCCMHHHB |
Consensus sequence: BHHDYGGGGGGGGBVD |
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Motif ID: |
UP00538 |
Motif name: |
Gli1_v015681_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0.0273225 |
Alignment:
MHHHWHYTMCCHCCCACVAABVH
-------CCCCDCCC--------
Original motif |
Reverse complement motif |
Consensus sequence: MHHHWHYTMCCHCCCACVAABVH |
Consensus sequence: DVVTTVGTGGGHGGYAMHWHHHY |
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Motif ID: |
UP00007 |
Motif name: |
Egr1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.0364166 |
Alignment:
VHTGCGGGGGCGGH
-----GGGDGGGG-
Original motif |
Reverse complement motif |
Consensus sequence: HCCGCCCCCGCAHB |
Consensus sequence: VHTGCGGGGGCGGH |
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Dataset #: 1 |
Motif ID: 6 |
Motif name: Motif 6 |
Original motif |
Reverse complement motif |
Consensus sequence: CTGGRRA |
Consensus sequence: TMMCCAG |
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Best Matches for Motif ID 6 (Highest to Lowest)
Motif ID: |
UP00000 |
Motif name: |
Smad3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
9 |
Number of overlap: |
7 |
Similarity score: |
0.00121838 |
Alignment:
HVHBVTGTCTGGDDHDD
--------CTGGRRA--
Original motif |
Reverse complement motif |
Consensus sequence: HDHDDCCAGACABBHVH |
Consensus sequence: HVHBVTGTCTGGDDHDD |
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Motif ID: |
UP00231 |
Motif name: |
Nkx2-2 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
7 |
Similarity score: |
0.00386806 |
Alignment:
HDVRCCACTTGARADBD
-------CTGGRRA---
Original motif |
Reverse complement motif |
Consensus sequence: HDVRCCACTTGARADBD |
Consensus sequence: DVDTKTCAAGTGGKBDH |
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Motif ID: |
UP00046 |
Motif name: |
Tcfe2a_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
7 |
Similarity score: |
0.00420562 |
Alignment:
VBHHVCAGGTGCDVDHD
-TMMCCAG---------
Original motif |
Reverse complement motif |
Consensus sequence: VBHHVCAGGTGCDVDHD |
Consensus sequence: DHDBHGCACCTGBDDVB |
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Motif ID: |
UP00161 |
Motif name: |
Hmbox1 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0.00428647 |
Alignment:
BDDBTTAACTAGWDKHV
-----TMMCCAG-----
Original motif |
Reverse complement motif |
Consensus sequence: VHRDWCTAGTTAABDDB |
Consensus sequence: BDDBTTAACTAGWDKHV |
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Motif ID: |
UP00098 |
Motif name: |
Rfx3_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
9 |
Number of overlap: |
7 |
Similarity score: |
0.010788 |
Alignment:
BDBBVBVGTAWCCAAGVBHBAGB
--------TMMCCAG--------
Original motif |
Reverse complement motif |
Consensus sequence: VCTBHBVCTTGGWTACVVVVVDB |
Consensus sequence: BDBBVBVGTAWCCAAGVBHBAGB |
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Dataset #: 1 |
Motif ID: 7 |
Motif name: Motif 7 |
Original motif |
Reverse complement motif |
Consensus sequence: AGRAAA |
Consensus sequence: TTTMCT |
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Best Matches for Motif ID 7 (Highest to Lowest)
Motif ID: |
UP00073 |
Motif name: |
Foxa2_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
6 |
Similarity score: |
0 |
Alignment:
BDVTTTKTTTACWTWHH
-------TTTMCT----
Original motif |
Reverse complement motif |
Consensus sequence: HHWAWGTAAAYAAAVDB |
Consensus sequence: BDVTTTKTTTACWTWHH |
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Motif ID: |
UP00039 |
Motif name: |
Foxj3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
6 |
Similarity score: |
0.0125029 |
Alignment:
DVVTTTGTTTACDTHDH
-------TTTMCT----
Original motif |
Reverse complement motif |
Consensus sequence: HDHADGTAAACAAAVVH |
Consensus sequence: DVVTTTGTTTACDTHDH |
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Motif ID: |
UP00090 |
Motif name: |
Elf3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
6 |
Similarity score: |
0.0161149 |
Alignment:
DAHMMGGAARTDA
----AGRAAA---
Original motif |
Reverse complement motif |
Consensus sequence: DAHMMGGAARTDA |
Consensus sequence: TDAMTTCCYYDTD |
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Motif ID: |
UP00025 |
Motif name: |
Foxk1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
6 |
Similarity score: |
0.0165207 |
Alignment:
BBVTTTGTTTACATTDD
-------TTTMCT----
Original motif |
Reverse complement motif |
Consensus sequence: DDAATGTAAACAAAVVB |
Consensus sequence: BBVTTTGTTTACATTDD |
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Motif ID: |
UP00180 |
Motif name: |
Hoxd13 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
6 |
Similarity score: |
0.0170044 |
Alignment:
HDHYYAATAAAAHHHH
------AGRAAA----
Original motif |
Reverse complement motif |
Consensus sequence: HDHYYAATAAAAHHHH |
Consensus sequence: HDHHTTTTATTKKHDD |
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Dataset #: 1 |
Motif ID: 8 |
Motif name: Motif 8 |
Original motif |
Reverse complement motif |
Consensus sequence: AAATAH |
Consensus sequence: DTATTT |
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Best Matches for Motif ID 8 (Highest to Lowest)
Motif ID: |
UP00073 |
Motif name: |
Foxa2_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
6 |
Similarity score: |
0 |
Alignment:
HHWAWGTAAAYAAAVDB
-------AAATAH----
Original motif |
Reverse complement motif |
Consensus sequence: HHWAWGTAAAYAAAVDB |
Consensus sequence: BDVTTTKTTTACWTWHH |
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Motif ID: |
UP00166 |
Motif name: |
Barhl1 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
8 |
Number of overlap: |
6 |
Similarity score: |
0.00310877 |
Alignment:
DDVKTAATTGGTTDTH
---DTATTT-------
Original motif |
Reverse complement motif |
Consensus sequence: HAHAACCAATTARBDH |
Consensus sequence: DDVKTAATTGGTTDTH |
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Motif ID: |
UP00242 |
Motif name: |
Hoxc8 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
6 |
Similarity score: |
0.00420475 |
Alignment:
BHDDDGTAATTAHHDT
-------AAATAH---
Original motif |
Reverse complement motif |
Consensus sequence: BHDDDGTAATTAHHDT |
Consensus sequence: AHDHTAATTACHHHHV |
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Motif ID: |
UP00179 |
Motif name: |
Pou2f3 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
9 |
Number of overlap: |
6 |
Similarity score: |
0.00508605 |
Alignment:
BHDTATGCAAATBHDV
--------AAATAH--
Original motif |
Reverse complement motif |
Consensus sequence: BHDTATGCAAATBHDV |
Consensus sequence: BHHVATTTGCATAHHV |
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Motif ID: |
UP00202 |
Motif name: |
Dlx1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
6 |
Similarity score: |
0.00517242 |
Alignment:
MDTAATTAHMBCHB
---AAATAH-----
Original motif |
Reverse complement motif |
Consensus sequence: BHGVRDTAATTADY |
Consensus sequence: MDTAATTAHMBCHB |
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Dataset #: 1 |
Motif ID: 9 |
Motif name: Motif 9 |
Original motif |
Reverse complement motif |
Consensus sequence: GGTGGCWS |
Consensus sequence: SWGCCACC |
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Best Matches for Motif ID 9 (Highest to Lowest)
Motif ID: |
UP00538 |
Motif name: |
Gli1_v016060_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
11 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
HVBDAGCGBGGGTGGCRDBDDDB
----------GGTGGCWS-----
Original motif |
Reverse complement motif |
Consensus sequence: HVBDAGCGBGGGTGGCRDBDDDB |
Consensus sequence: BDDHVDKGCCACCCVCGCTDBVH |
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Motif ID: |
UP00539 |
Motif name: |
Gli2_v015681_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0.0128982 |
Alignment:
HTBVVVDGGACCACCCRGRDBG
-------SWGCCACC-------
Original motif |
Reverse complement motif |
Consensus sequence: HTBVVVDGGACCACCCRGRDBG |
Consensus sequence: CBDMCMGGGTGGTCCHVBVBAH |
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Motif ID: |
UP00538 |
Motif name: |
Gli1_v016060_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
10 |
Number of overlap: |
8 |
Similarity score: |
0.0130995 |
Alignment:
HGDHVHKGACCACCCGGBGBGDB
------SWGCCACC---------
Original motif |
Reverse complement motif |
Consensus sequence: BHCBCBCCGGGTGGTCYHVHDCH |
Consensus sequence: HGDHVHKGACCACCCGGBGBGDB |
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Motif ID: |
UP00035 |
Motif name: |
Hic1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.0142671 |
Alignment:
DBBATGCCAACCHVHH
---SWGCCACC-----
Original motif |
Reverse complement motif |
Consensus sequence: DBBATGCCAACCHVHH |
Consensus sequence: DDBHGGTTGGCATVBD |
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Motif ID: |
UP00540 |
Motif name: |
Gli3_v016060_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0.0142765 |
Alignment:
HDGHHBHRGACCACCCGSVDVG
-------SWGCCACC-------
Original motif |
Reverse complement motif |
Consensus sequence: HDGHHBHRGACCACCCGSVDVG |
Consensus sequence: CVHBSCGGGTGGTCMHVHHCDH |
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Dataset #: 1 |
Motif ID: 10 |
Motif name: Motif 10 |
Original motif |
Reverse complement motif |
Consensus sequence: CTGGCCTC |
Consensus sequence: GAGGCCAG |
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Best Matches for Motif ID 10 (Highest to Lowest)
Motif ID: |
UP00527 |
Motif name: |
Foxn4_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
TCDAMVBGACGCMAKDDDVBBD
-------GAGGCCAG-------
Original motif |
Reverse complement motif |
Consensus sequence: DBBVDDDRTRGCGTCBBYTHGA |
Consensus sequence: TCDAMVBGACGCMAKDDDVBBD |
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Motif ID: |
UP00079 |
Motif name: |
Esrra_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.000107403 |
Alignment:
DBBHHTGACCCCTBBYV
----CTGGCCTC-----
Original motif |
Reverse complement motif |
Consensus sequence: VKBBAGGGGTCAHDBBH |
Consensus sequence: DBBHHTGACCCCTBBYV |
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Motif ID: |
UP00020 |
Motif name: |
Atf1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.00300031 |
Alignment:
DMDMTGACGTCAKHBD
---CTGGCCTC-----
Original motif |
Reverse complement motif |
Consensus sequence: DBDRTGACGTCAYHRD |
Consensus sequence: DMDMTGACGTCAKHBD |
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Motif ID: |
UP00053 |
Motif name: |
Rxra_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.00367302 |
Alignment:
DBHBDTGACCCCDHVHB
----CTGGCCTC-----
Original motif |
Reverse complement motif |
Consensus sequence: DBHBDTGACCCCDHVHB |
Consensus sequence: VHBHDGGGGTCAHBHBD |
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Motif ID: |
UP00079 |
Motif name: |
Esrra_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.00526703 |
Alignment:
HHBVHTGACCTTGVDHD
----CTGGCCTC-----
Original motif |
Reverse complement motif |
Consensus sequence: DHDBCAAGGTCAHVBDH |
Consensus sequence: HHBVHTGACCTTGVDHD |
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Dataset #: 1 |
Motif ID: 11 |
Motif name: Motif 11 |
Original motif |
Reverse complement motif |
Consensus sequence: CTBCCTCY |
Consensus sequence: MGAGGBAG |
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Best Matches for Motif ID 11 (Highest to Lowest)
Motif ID: |
UP00085 |
Motif name: |
Sfpi1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
HDACTTCCBCWTDV
---CTBCCTCY---
Original motif |
Reverse complement motif |
Consensus sequence: BDAWGVGGAAGTDH |
Consensus sequence: HDACTTCCBCWTDV |
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Motif ID: |
UP00409 |
Motif name: |
Elf5 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.000275689 |
Alignment:
BWAHSMGGAAGTWD
---MGAGGBAG---
Original motif |
Reverse complement motif |
Consensus sequence: BWAHSMGGAAGTWD |
Consensus sequence: DWACTTCCRSDTWV |
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Motif ID: |
UP00419 |
Motif name: |
Spic |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.000518708 |
Alignment:
DWACTTCCRCTTTB
---CTBCCTCY---
Original motif |
Reverse complement motif |
Consensus sequence: VAAAGMGGAAGTWD |
Consensus sequence: DWACTTCCRCTTTB |
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Motif ID: |
UP00002 |
Motif name: |
Sp4_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.00485464 |
Alignment:
BVVHAGGGGGCGRDHHB
----MGAGGBAG-----
Original motif |
Reverse complement motif |
Consensus sequence: BDHHMCGCCCCCTHVBB |
Consensus sequence: BVVHAGGGGGCGRDHHB |
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Motif ID: |
UP00093 |
Motif name: |
Klf7_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
2 |
Number of overlap: |
8 |
Similarity score: |
0.00614662 |
Alignment:
DHHDGGGCGRGGKHBH
-------MGAGGBAG-
Original motif |
Reverse complement motif |
Consensus sequence: HBDRCCMCGCCCHHHD |
Consensus sequence: DHHDGGGCGRGGKHBH |
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Dataset #: 1 |
Motif ID: 12 |
Motif name: Motif 12 |
Original motif |
Reverse complement motif |
Consensus sequence: GATGGCTC |
Consensus sequence: GAGCCATC |
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Best Matches for Motif ID 12 (Highest to Lowest)
Motif ID: |
UP00046 |
Motif name: |
Tcfe2a_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
HVDDVCAGATGKYHBBV
-------GATGGCTC--
Original motif |
Reverse complement motif |
Consensus sequence: HVDDVCAGATGKYHBBV |
Consensus sequence: VBBDMYCATCTGVHHBH |
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Motif ID: |
UP00033 |
Motif name: |
Zfp410_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
2 |
Number of overlap: |
8 |
Similarity score: |
0.00155237 |
Alignment:
DVDDATGGGATGKMDDV
--------GATGGCTC-
Original motif |
Reverse complement motif |
Consensus sequence: DVDDATGGGATGKMDDV |
Consensus sequence: BDDYYCATCCCATDDBD |
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Motif ID: |
UP00528 |
Motif name: |
Foxm1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0.00582365 |
Alignment:
VHVRCAYGATGCATCDTVVADTH
-------GAGCCATC--------
Original motif |
Reverse complement motif |
Consensus sequence: HADTBVADGATGCATCMTGMVHB |
Consensus sequence: VHVRCAYGATGCATCDTVVADTH |
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Motif ID: |
UP00103 |
Motif name: |
Jundm2_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.00695523 |
Alignment:
HDDKTGASTCAKHRDB
-----GAGCCATC---
Original motif |
Reverse complement motif |
Consensus sequence: VDKDRTGASTCAYHDH |
Consensus sequence: HDDKTGASTCAKHRDB |
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Motif ID: |
UP00035 |
Motif name: |
Hic1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.00724333 |
Alignment:
DBBATGCCAACCHVHH
---GAGCCATC-----
Original motif |
Reverse complement motif |
Consensus sequence: DBBATGCCAACCHVHH |
Consensus sequence: DDBHGGTTGGCATVBD |
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Dataset #: 1 |
Motif ID: 13 |
Motif name: Motif 13 |
Original motif |
Reverse complement motif |
Consensus sequence: CAGYDCC |
Consensus sequence: GGDKCTG |
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Best Matches for Motif ID 13 (Highest to Lowest)
Motif ID: |
UP00205 |
Motif name: |
Pknox2 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
8 |
Number of overlap: |
7 |
Similarity score: |
0.0202873 |
Alignment:
HAVSRSCTGTCAATHB
--GGDKCTG-------
Original motif |
Reverse complement motif |
Consensus sequence: HAVSRSCTGTCAATHB |
Consensus sequence: VHATTGACAGSKSVTH |
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Motif ID: |
UP00122 |
Motif name: |
Tgif1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
7 |
Similarity score: |
0.022836 |
Alignment:
DABWWTGACAGCTVVBD
--------CAGYDCC--
Original motif |
Reverse complement motif |
Consensus sequence: DABWWTGACAGCTVVBD |
Consensus sequence: DBVVAGCTGTCAWWVTH |
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Motif ID: |
UP00258 |
Motif name: |
Tgif2 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
7 |
Similarity score: |
0.0283472 |
Alignment:
VBWTTGACAGCTVBTT
-------CAGYDCC--
Original motif |
Reverse complement motif |
Consensus sequence: AABBAGCTGTCAAWVV |
Consensus sequence: VBWTTGACAGCTVBTT |
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Motif ID: |
UP00203 |
Motif name: |
Pknox1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
7 |
Similarity score: |
0.0289437 |
Alignment:
VVWTTGACAGSTSBKD
-------CAGYDCC--
Original motif |
Reverse complement motif |
Consensus sequence: DRVSASCTGTCAAWVV |
Consensus sequence: VVWTTGACAGSTSBKD |
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Motif ID: |
UP00193 |
Motif name: |
Rhox11_2205.1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
7 |
Similarity score: |
0.0291958 |
Alignment:
WVVHWTWACAGCGHHVT
--------CAGYDCC--
Original motif |
Reverse complement motif |
Consensus sequence: AVDHCGCTGTWAWDVVW |
Consensus sequence: WVVHWTWACAGCGHHVT |
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Dataset #: 1 |
Motif ID: 14 |
Motif name: Motif 14 |
Original motif |
Reverse complement motif |
Consensus sequence: TSTGTR |
Consensus sequence: MACASA |
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Best Matches for Motif ID 14 (Highest to Lowest)
Motif ID: |
UP00026 |
Motif name: |
Zscan4_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
6 |
Similarity score: |
0 |
Alignment:
HVHRGCACACAAHHHV
-----MACASA-----
Original motif |
Reverse complement motif |
Consensus sequence: HVHRGCACACAAHHHV |
Consensus sequence: BHHHTTGTGTGCKHVD |
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Motif ID: |
UP00042 |
Motif name: |
Gm397_second |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
6 |
Similarity score: |
0.00200057 |
Alignment:
DVMVGCACACACKCVH
-----MACASA-----
Original motif |
Reverse complement motif |
Consensus sequence: DVMVGCACACACKCVH |
Consensus sequence: HBGYGTGTGTGCVRVD |
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Motif ID: |
UP00026 |
Motif name: |
Zscan4_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
6 |
Similarity score: |
0.0148405 |
Alignment:
DHVDTGTGCACAYAHDH
--------MACASA---
Original motif |
Reverse complement motif |
Consensus sequence: DHVDTGTGCACAYAHDH |
Consensus sequence: HDHTMTGTGCACADVHD |
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Motif ID: |
UP00042 |
Motif name: |
Gm397_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
9 |
Number of overlap: |
6 |
Similarity score: |
0.0236149 |
Alignment:
HHRTATGTGCACATHHD
---TSTGTR--------
Original motif |
Reverse complement motif |
Consensus sequence: HHDATGTGCACATAMDH |
Consensus sequence: HHRTATGTGCACATHHD |
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Motif ID: |
UP00041 |
Motif name: |
Foxj1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
7 |
Number of overlap: |
6 |
Similarity score: |
0.0266195 |
Alignment:
HDHRTAAACAAAHDDD
------MACASA----
Original motif |
Reverse complement motif |
Consensus sequence: HDHRTAAACAAAHDDD |
Consensus sequence: DDDHTTTGTTTAMHDH |
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Dataset #: 1 |
Motif ID: 15 |
Motif name: Motif 15 |
Original motif |
Reverse complement motif |
Consensus sequence: GCTCTTAA |
Consensus sequence: TTAAGAGC |
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Best Matches for Motif ID 15 (Highest to Lowest)
Motif ID: |
UP00173 |
Motif name: |
Hoxc13 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
DHWTTTTAMGAGBDHH
-----TTAAGAGC---
Original motif |
Reverse complement motif |
Consensus sequence: HHDBCTCRTAAAAWHD |
Consensus sequence: DHWTTTTAMGAGBDHH |
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Motif ID: |
UP00183 |
Motif name: |
Hoxa13 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.00510293 |
Alignment:
DVWTTTTACGAGBHDH
-----TTAAGAGC---
Original motif |
Reverse complement motif |
Consensus sequence: HDHBCTCGTAAAAWBD |
Consensus sequence: DVWTTTTACGAGBHDH |
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Motif ID: |
UP00228 |
Motif name: |
Bapx1 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.0182341 |
Alignment:
DTBVTTAAGTGGTTHHV
----TTAAGAGC-----
Original motif |
Reverse complement motif |
Consensus sequence: VHHAACCACTTAAVVAH |
Consensus sequence: DTBVTTAAGTGGTTHHV |
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Motif ID: |
UP00135 |
Motif name: |
Hoxc12 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.0206445 |
Alignment:
DDVHWTTTACGACCKHH
------TTAAGAGC---
Original motif |
Reverse complement motif |
Consensus sequence: HHRGGTCGTAAAWHBDH |
Consensus sequence: DDVHWTTTACGACCKHH |
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Motif ID: |
UP00177 |
Motif name: |
Hoxd12 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
7 |
Number of overlap: |
8 |
Similarity score: |
0.023305 |
Alignment:
DHDHTTTTACGACVDHD
------TTAAGAGC---
Original motif |
Reverse complement motif |
Consensus sequence: HHDVGTCGTAAAAHHHD |
Consensus sequence: DHDHTTTTACGACVDHD |
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Dataset #: 1 |
Motif ID: 16 |
Motif name: Motif 16 |
Original motif |
Reverse complement motif |
Consensus sequence: GGAAGRR |
Consensus sequence: MMCTTCC |
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Best Matches for Motif ID 16 (Highest to Lowest)
Motif ID: |
UP00409 |
Motif name: |
Elf5 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
7 |
Similarity score: |
0 |
Alignment:
DWACTTCCRSDTWV
-MMCTTCC------
Original motif |
Reverse complement motif |
Consensus sequence: BWAHSMGGAAGTWD |
Consensus sequence: DWACTTCCRSDTWV |
|
|
|
|
Motif ID: |
UP00013 |
Motif name: |
Gabpa_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
8 |
Number of overlap: |
7 |
Similarity score: |
0.00097547 |
Alignment:
BHHHACTTCCGGTHHBD
---MMCTTCC-------
Original motif |
Reverse complement motif |
Consensus sequence: HVHHACCGGAAGTDHHV |
Consensus sequence: BHHHACTTCCGGTHHBD |
|
|
|
|
Motif ID: |
UP00420 |
Motif name: |
Elk3 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
7 |
Similarity score: |
0.00131169 |
Alignment:
VBVDMCTTCCGGTVBVD
---MMCTTCC-------
Original motif |
Reverse complement motif |
Consensus sequence: DVBBACCGGAAGYDVVV |
Consensus sequence: VBVDMCTTCCGGTVBVD |
|
|
|
|
Motif ID: |
UP00419 |
Motif name: |
Spic |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
7 |
Similarity score: |
0.00204701 |
Alignment:
DWACTTCCRCTTTB
-MMCTTCC------
Original motif |
Reverse complement motif |
Consensus sequence: VAAAGMGGAAGTWD |
Consensus sequence: DWACTTCCRCTTTB |
|
|
|
|
Motif ID: |
UP00404 |
Motif name: |
Elf2 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
7 |
Similarity score: |
0.00230178 |
Alignment:
DBBHACTTCCGGDWDB
---MMCTTCC------
Original motif |
Reverse complement motif |
Consensus sequence: DBBHACTTCCGGDWDB |
Consensus sequence: BDWDCCGGAAGTHBBD |
|
|
|
|
Dataset #: 1 |
Motif ID: 17 |
Motif name: Motif 17 |
Original motif |
Reverse complement motif |
Consensus sequence: CCDCCTCC |
Consensus sequence: GGAGGDGG |
|
|
|
|
Best Matches for Motif ID 17 (Highest to Lowest)
Motif ID: |
UP00021 |
Motif name: |
Zfp281_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.00331161 |
Alignment:
GKRGGGGGGGGGGBD
---GGAGGDGG----
Original motif |
Reverse complement motif |
Consensus sequence: DBCCCCCCCCCCMYC |
Consensus sequence: GKRGGGGGGGGGGBD |
|
|
|
|
Motif ID: |
UP00007 |
Motif name: |
Egr1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
8 |
Similarity score: |
0.00990566 |
Alignment:
HCCGCCCCCGCAHB
-CCDCCTCC-----
Original motif |
Reverse complement motif |
Consensus sequence: HCCGCCCCCGCAHB |
Consensus sequence: VHTGCGGGGGCGGH |
|
|
|
|
Motif ID: |
UP00002 |
Motif name: |
Sp4_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.0127556 |
Alignment:
BDHHMCGCCCCCTHVBB
----CCDCCTCC-----
Original motif |
Reverse complement motif |
Consensus sequence: BDHHMCGCCCCCTHVBB |
Consensus sequence: BVVHAGGGGGCGRDHHB |
|
|
|
|
Motif ID: |
UP00022 |
Motif name: |
Zfp740_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.0192546 |
Alignment:
BHHDYGGGGGGGGBVD
-----GGAGGDGG---
Original motif |
Reverse complement motif |
Consensus sequence: HVBCCCCCCCCMHHHB |
Consensus sequence: BHHDYGGGGGGGGBVD |
|
|
|
|
Motif ID: |
UP00538 |
Motif name: |
Gli1_v015681_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
10 |
Number of overlap: |
8 |
Similarity score: |
0.0193256 |
Alignment:
MHHHWHYTMCCHCCCACVAABVH
---------CCDCCTCC------
Original motif |
Reverse complement motif |
Consensus sequence: MHHHWHYTMCCHCCCACVAABVH |
Consensus sequence: DVVTTVGTGGGHGGYAMHWHHHY |
|
|
|
|
Dataset #: 1 |
Motif ID: 18 |
Motif name: Motif 18 |
Original motif |
Reverse complement motif |
Consensus sequence: CATGYATG |
Consensus sequence: CATKCATG |
|
|
|
|
Best Matches for Motif ID 18 (Highest to Lowest)
Motif ID: |
UP00236 |
Motif name: |
Irx2 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.0094584 |
Alignment:
WVWDDTACATGTADDDW
-------CATGYATG--
Original motif |
Reverse complement motif |
Consensus sequence: WDDDTACATGTADDWBW |
Consensus sequence: WVWDDTACATGTADDDW |
|
|
|
|
Motif ID: |
UP00051 |
Motif name: |
Sox8_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.0108518 |
Alignment:
DHATTCATGHVABV
-CATKCATG-----
Original motif |
Reverse complement motif |
Consensus sequence: DHATTCATGHVABV |
Consensus sequence: VBTVHCATGAATDD |
|
|
|
|
Motif ID: |
UP00055 |
Motif name: |
Hbp1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
7 |
Number of overlap: |
8 |
Similarity score: |
0.0133688 |
Alignment:
VDHATTCATTSAWDDH
--CATKCATG------
Original motif |
Reverse complement motif |
Consensus sequence: HHDWTSAATGAATDDB |
Consensus sequence: VDHATTCATTSAWDDH |
|
|
|
|
Motif ID: |
UP00223 |
Motif name: |
Irx3_2226.1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0.0143625 |
Alignment:
DHDWBTACATGTAHDDD
-------CATGYATG--
Original motif |
Reverse complement motif |
Consensus sequence: DDDHTACATGTAVWDHD |
Consensus sequence: DHDWBTACATGTAHDDD |
|
|
|
|
Motif ID: |
UP00223 |
Motif name: |
Irx3_0920.1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0.0163294 |
Alignment:
DDWWBTACATGTADDDD
-------CATGYATG--
Original motif |
Reverse complement motif |
Consensus sequence: DDDDTACATGTAVWWHD |
Consensus sequence: DDWWBTACATGTADDDD |
|
|
|
|
Dataset #: 1 |
Motif ID: 19 |
Motif name: Motif 19 |
Original motif |
Reverse complement motif |
Consensus sequence: CAGSCAG |
Consensus sequence: CTGSCTG |
|
|
|
|
Best Matches for Motif ID 19 (Highest to Lowest)
Motif ID: |
UP00000 |
Motif name: |
Smad3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
7 |
Similarity score: |
0 |
Alignment:
HDHDDCCAGACABBHVH
------CAGSCAG----
Original motif |
Reverse complement motif |
Consensus sequence: HDHDDCCAGACABBHVH |
Consensus sequence: HVHBVTGTCTGGDDHDD |
|
|
|
|
Motif ID: |
UP00006 |
Motif name: |
Zic3_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
7 |
Similarity score: |
0.0064943 |
Alignment:
DVHCYTGCTGTGHDH
---CTGSCTG-----
Original motif |
Reverse complement motif |
Consensus sequence: DDDCACAGCAKGHVD |
Consensus sequence: DVHCYTGCTGTGHDH |
|
|
|
|
Motif ID: |
UP00057 |
Motif name: |
Zic2_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0.00786726 |
Alignment:
DVBCYTGCTGBGDDD
---CTGSCTG-----
Original motif |
Reverse complement motif |
Consensus sequence: HHDCVCAGCAKGVVD |
Consensus sequence: DVBCYTGCTGBGDDD |
|
|
|
|
Motif ID: |
UP00092 |
Motif name: |
Myb_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
8 |
Number of overlap: |
7 |
Similarity score: |
0.0123596 |
Alignment:
DBVKGGCAGTTGGTHB
--CAGSCAG-------
Original motif |
Reverse complement motif |
Consensus sequence: BDACCAACTGCCRBBH |
Consensus sequence: DBVKGGCAGTTGGTHB |
|
|
|
|
Motif ID: |
UP00102 |
Motif name: |
Zic1_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
7 |
Similarity score: |
0.0127545 |
Alignment:
DVHCCTGCTGBGDDB
---CTGSCTG-----
Original motif |
Reverse complement motif |
Consensus sequence: BHDCVCAGCAGGHVD |
Consensus sequence: DVHCCTGCTGBGDDB |
|
|
|
|
Dataset #: 1 |
Motif ID: 20 |
Motif name: Motif 20 |
Original motif |
Reverse complement motif |
Consensus sequence: CACGTR |
Consensus sequence: MACGTG |
|
|
|
|
Best Matches for Motif ID 20 (Highest to Lowest)
Motif ID: |
UP00050 |
Motif name: |
Bhlhb2_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
9 |
Number of overlap: |
6 |
Similarity score: |
0 |
Alignment:
DDHBHBSTCACGTGAHBBDHHM
--------CACGTR--------
Original motif |
Reverse complement motif |
Consensus sequence: RDHDBVDTCACGTGASBHVHDH |
Consensus sequence: DDHBHBSTCACGTGAHBBDHHM |
|
|
|
|
Motif ID: |
UP00060 |
Motif name: |
Max_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
6 |
Similarity score: |
0.00504882 |
Alignment:
HHVBABCACGTGSTHD
------CACGTR----
Original motif |
Reverse complement motif |
Consensus sequence: DDASCACGTGBTBVDD |
Consensus sequence: HHVBABCACGTGSTHD |
|
|
|
|
Motif ID: |
UP00050 |
Motif name: |
Bhlhb2_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
9 |
Number of overlap: |
6 |
Similarity score: |
0.0050835 |
Alignment:
ACHRBHDTCCACGTGYAHHBMHM
---------CACGTR--------
Original motif |
Reverse complement motif |
Consensus sequence: YDYBDHTMCACGTGGADDBMDGT |
Consensus sequence: ACHRBHDTCCACGTGYAHHBMHM |
|
|
|
|
Motif ID: |
UP00046 |
Motif name: |
Tcfe2a_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
7 |
Number of overlap: |
6 |
Similarity score: |
0.0336216 |
Alignment:
DHDBHGCACCTGBDDVB
------CACGTR-----
Original motif |
Reverse complement motif |
Consensus sequence: VBHHVCAGGTGCDVDHD |
Consensus sequence: DHDBHGCACCTGBDDVB |
|
|
|
|
Motif ID: |
UP00249 |
Motif name: |
Nkx2-5 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
6 |
Similarity score: |
0.0339468 |
Alignment:
HDADCCACTTRAAWTT
-----CACGTR-----
Original motif |
Reverse complement motif |
Consensus sequence: HDADCCACTTRAAWTT |
Consensus sequence: AAWTTMAAGTGGHTDH |
|
|
|
|
Dataset #: 1 |
Motif ID: 21 |
Motif name: Motif 21 |
Original motif |
Reverse complement motif |
Consensus sequence: CCACYAGG |
Consensus sequence: CCTKGTGG |
|
|
|
|
Best Matches for Motif ID 21 (Highest to Lowest)
Motif ID: |
UP00538 |
Motif name: |
Gli1_v016060_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
7 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
HGDHVHKGACCACCCGGBGBGDB
---------CCACYAGG------
Original motif |
Reverse complement motif |
Consensus sequence: BHCBCBCCGGGTGGTCYHVHDCH |
Consensus sequence: HGDHVHKGACCACCCGGBGBGDB |
|
|
|
|
Motif ID: |
UP00539 |
Motif name: |
Gli2_v015681_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
11 |
Number of overlap: |
8 |
Similarity score: |
0.00212209 |
Alignment:
CBDMCMGGGTGGTCCHVBVBAH
----CCTKGTGG----------
Original motif |
Reverse complement motif |
Consensus sequence: HTBVVVDGGACCACCCRGRDBG |
Consensus sequence: CBDMCMGGGTGGTCCHVBVBAH |
|
|
|
|
Motif ID: |
UP00540 |
Motif name: |
Gli3_v016060_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
11 |
Number of overlap: |
8 |
Similarity score: |
0.00654113 |
Alignment:
CVHBSCGGGTGGTCMHVHHCDH
----CCTKGTGG----------
Original motif |
Reverse complement motif |
Consensus sequence: HDGHHBHRGACCACCCGSVDVG |
Consensus sequence: CVHBSCGGGTGGTCMHVHHCDH |
|
|
|
|
Motif ID: |
UP00047 |
Motif name: |
Zbtb7b_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.00890824 |
Alignment:
BDDRVGACCACCHBDVB
-------CCACYAGG--
Original motif |
Reverse complement motif |
Consensus sequence: BDDRVGACCACCHBDVB |
Consensus sequence: BBDVHGGTGGTCBKDDB |
|
|
|
|
Motif ID: |
UP00102 |
Motif name: |
Zic1_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.0167011 |
Alignment:
DVHCCTGCTGBGDDB
---CCTKGTGG----
Original motif |
Reverse complement motif |
Consensus sequence: BHDCVCAGCAGGHVD |
Consensus sequence: DVHCCTGCTGBGDDB |
|
|
|
|
Dataset #: 1 |
Motif ID: 22 |
Motif name: Motif 22 |
Original motif |
Reverse complement motif |
Consensus sequence: CAGATYCC |
Consensus sequence: GGKATCTG |
|
|
|
|
Best Matches for Motif ID 22 (Highest to Lowest)
Motif ID: |
UP00232 |
Motif name: |
Dobox4 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
DAWKGGGTATCTAWHWH
-----GGKATCTG----
Original motif |
Reverse complement motif |
Consensus sequence: HWHWTAGATACCCYWTD |
Consensus sequence: DAWKGGGTATCTAWHWH |
|
|
|
|
Motif ID: |
UP00159 |
Motif name: |
Six2 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.0241128 |
Alignment:
DAKRGGGTATCACDWHT
-----GGKATCTG----
Original motif |
Reverse complement motif |
Consensus sequence: DAKRGGGTATCACDWHT |
Consensus sequence: AHWDGTGATACCCMRTD |
|
|
|
|
Motif ID: |
UP00388 |
Motif name: |
Six6_2267.4 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.0250604 |
Alignment:
DATRGGGTATCAHDWHT
-----GGKATCTG----
Original motif |
Reverse complement motif |
Consensus sequence: DATRGGGTATCAHDWHT |
Consensus sequence: AHWDHTGATACCCKATD |
|
|
|
|
Motif ID: |
UP00195 |
Motif name: |
Six3 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.0259075 |
Alignment:
DATRGGGTATCAHHWHT
-----GGKATCTG----
Original motif |
Reverse complement motif |
Consensus sequence: DATRGGGTATCAHHWHT |
Consensus sequence: AHWHDTGATACCCKATH |
|
|
|
|
Motif ID: |
UP00192 |
Motif name: |
Six1 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.0264035 |
Alignment:
DHDRGGGTATCAHDHBT
-----GGKATCTG----
Original motif |
Reverse complement motif |
Consensus sequence: DHDRGGGTATCAHDHBT |
Consensus sequence: AVHDHTGATACCCMDHH |
|
|
|
|
Dataset #: 1 |
Motif ID: 23 |
Motif name: Motif 23 |
Original motif |
Reverse complement motif |
Consensus sequence: GASAGAGA |
Consensus sequence: TCTCTSTC |
|
|
|
|
Best Matches for Motif ID 23 (Highest to Lowest)
Motif ID: |
UP00032 |
Motif name: |
Gata3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
HBHDVHDTCTTATCTHTDDHDV
----------TCTCTSTC----
Original motif |
Reverse complement motif |
Consensus sequence: BDHDDADAGATAAGADHBDHVD |
Consensus sequence: HBHDVHDTCTTATCTHTDDHDV |
|
|
|
|
Motif ID: |
UP00040 |
Motif name: |
Irf5_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.00356941 |
Alignment:
BHDAHCGAGARTHBV
--GASAGAGA-----
Original motif |
Reverse complement motif |
Consensus sequence: BHDAHCGAGARTHBV |
Consensus sequence: VBHAKTCTCGHTHHV |
|
|
|
|
Motif ID: |
UP00258 |
Motif name: |
Tgif2 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.0059307 |
Alignment:
AABBAGCTGTCAAWVV
---TCTCTSTC-----
Original motif |
Reverse complement motif |
Consensus sequence: AABBAGCTGTCAAWVV |
Consensus sequence: VBWTTGACAGCTVBTT |
|
|
|
|
Motif ID: |
UP00080 |
Motif name: |
Gata5_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0.00994332 |
Alignment:
VVHHWGATATCTMHBBV
-------TCTCTSTC--
Original motif |
Reverse complement motif |
Consensus sequence: VVBHRAGATATCWDHBB |
Consensus sequence: VVHHWGATATCTMHBBV |
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Motif ID: |
UP00186 |
Motif name: |
Meis1 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.0114008 |
Alignment:
WAVBASCTGTCAAWVH
---TCTCTSTC-----
Original motif |
Reverse complement motif |
Consensus sequence: WAVBASCTGTCAAWVH |
Consensus sequence: DBWTTGACAGSTBVTW |
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Dataset #: 1 |
Motif ID: 24 |
Motif name: Motif 24 |
Original motif |
Reverse complement motif |
Consensus sequence: TGTGGGTG |
Consensus sequence: CACCCACA |
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Best Matches for Motif ID 24 (Highest to Lowest)
Motif ID: |
UP00540 |
Motif name: |
Gli3_v015681_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
12 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
ABBBBVVRGACCACCCACRDBBM
-----------CACCCACA----
Original motif |
Reverse complement motif |
Consensus sequence: ABBBBVVRGACCACCCACRDBBM |
Consensus sequence: YBVDMGTGGGTGGTCKVVBVBBT |
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Motif ID: |
UP00070 |
Motif name: |
Gcm1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.00199912 |
Alignment:
DHDVATGCGGGTHVVH
-----TGTGGGTG---
Original motif |
Reverse complement motif |
Consensus sequence: HVVHACCCGCATVDHD |
Consensus sequence: DHDVATGCGGGTHVVH |
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Motif ID: |
UP00538 |
Motif name: |
Gli1_v015681_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
11 |
Number of overlap: |
8 |
Similarity score: |
0.00682225 |
Alignment:
MHHHWHYTMCCHCCCACVAABVH
----------CACCCACA-----
Original motif |
Reverse complement motif |
Consensus sequence: MHHHWHYTMCCHCCCACVAABVH |
Consensus sequence: DVVTTVGTGGGHGGYAMHWHHHY |
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Motif ID: |
UP00539 |
Motif name: |
Gli2_v016060_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
11 |
Number of overlap: |
8 |
Similarity score: |
0.0105432 |
Alignment:
DTVBDDRGACCACCCAGDWDGBH
----------CACCCACA-----
Original motif |
Reverse complement motif |
Consensus sequence: DTVBDDRGACCACCCAGDWDGBH |
Consensus sequence: DBCDWHCTGGGTGGTCMDHBBAH |
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Motif ID: |
UP00021 |
Motif name: |
Zfp281_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.011455 |
Alignment:
DKKWDACCCCCAHTDDV
----CACCCACA-----
Original motif |
Reverse complement motif |
Consensus sequence: DKKWDACCCCCAHTDDV |
Consensus sequence: VDDAHTGGGGGTHWYYD |
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Dataset #: 1 |
Motif ID: 25 |
Motif name: Motif 25 |
Original motif |
Reverse complement motif |
Consensus sequence: CTGRGTTC |
Consensus sequence: GAACKCAG |
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Best Matches for Motif ID 25 (Highest to Lowest)
Motif ID: |
UP00019 |
Motif name: |
Zbtb12_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
9 |
Number of overlap: |
8 |
Similarity score: |
0.015191 |
Alignment:
BDHRBGTTCTAGATCVB
-CTGRGTTC--------
Original motif |
Reverse complement motif |
Consensus sequence: BDHRBGTTCTAGATCVB |
Consensus sequence: BBGATCTAGAACBKHDB |
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Motif ID: |
UP00006 |
Motif name: |
Zic3_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0.0235944 |
Alignment:
DDDCACAGCAKGHVD
GAACKCAG-------
Original motif |
Reverse complement motif |
Consensus sequence: DDDCACAGCAKGHVD |
Consensus sequence: DVHCYTGCTGTGHDH |
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Motif ID: |
UP00102 |
Motif name: |
Zic1_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0.0252114 |
Alignment:
BHDCVCAGCAGGHVD
GAACKCAG-------
Original motif |
Reverse complement motif |
Consensus sequence: BHDCVCAGCAGGHVD |
Consensus sequence: DVHCCTGCTGBGDDB |
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Motif ID: |
UP00066 |
Motif name: |
Hnf4a_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.0255154 |
Alignment:
BDBVMGGGGTCAABHDV
---CTGRGTTC------
Original motif |
Reverse complement motif |
Consensus sequence: BDBVMGGGGTCAABHDV |
Consensus sequence: BHHVTTGACCCCYVVDB |
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Motif ID: |
UP00148 |
Motif name: |
Hdx |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.0260414 |
Alignment:
BDBDHTGATTTCDHYDD
----CTGRGTTC-----
Original motif |
Reverse complement motif |
Consensus sequence: DDKDHGAAATCAHHBHV |
Consensus sequence: BDBDHTGATTTCDHYDD |
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Dataset #: 1 |
Motif ID: 26 |
Motif name: Motif 26 |
Original motif |
Reverse complement motif |
Consensus sequence: CAGAGGAY |
Consensus sequence: KTCCTCTG |
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Best Matches for Motif ID 26 (Highest to Lowest)
Motif ID: |
UP00046 |
Motif name: |
Tcfe2a_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
HVDDVCAGATGKYHBBV
-----CAGAGGAY----
Original motif |
Reverse complement motif |
Consensus sequence: HVDDVCAGATGKYHBBV |
Consensus sequence: VBBDMYCATCTGVHHBH |
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Motif ID: |
UP00067 |
Motif name: |
Lef1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0.00361871 |
Alignment:
DDDYCCTTTGATCTDDV
--KTCCTCTG-------
Original motif |
Reverse complement motif |
Consensus sequence: DDDYCCTTTGATCTDDV |
Consensus sequence: VDDAGATCAAAGGKDDD |
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Motif ID: |
UP00083 |
Motif name: |
Tcf7l2_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0.00571944 |
Alignment:
DDDYCCTTTGATSTDDV
--KTCCTCTG-------
Original motif |
Reverse complement motif |
Consensus sequence: DDDYCCTTTGATSTDDV |
Consensus sequence: BDDASATCAAAGGMDDD |
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Motif ID: |
UP00030 |
Motif name: |
Sox11_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0.00988532 |
Alignment:
HHBTMCTTTGTTMDDVH
--KTCCTCTG-------
Original motif |
Reverse complement motif |
Consensus sequence: HBDDRAACAAAGRABHH |
Consensus sequence: HHBTMCTTTGTTMDDVH |
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Motif ID: |
UP00062 |
Motif name: |
Sox4_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.0118578 |
Alignment:
HHBBMCTTTGTTHDDBH
--KTCCTCTG-------
Original motif |
Reverse complement motif |
Consensus sequence: HBDDDAACAAAGRVBHH |
Consensus sequence: HHBBMCTTTGTTHDDBH |
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Dataset #: 1 |
Motif ID: 27 |
Motif name: Motif 27 |
Original motif |
Reverse complement motif |
Consensus sequence: CSGCCGCC |
Consensus sequence: GGCGGCSG |
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Best Matches for Motif ID 27 (Highest to Lowest)
Motif ID: |
UP00007 |
Motif name: |
Egr1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
8 |
Similarity score: |
0.012469 |
Alignment:
HCCGCCCCCGCAHB
-CSGCCGCC-----
Original motif |
Reverse complement motif |
Consensus sequence: HCCGCCCCCGCAHB |
Consensus sequence: VHTGCGGGGGCGGH |
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Motif ID: |
UP00002 |
Motif name: |
Sp4_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.012605 |
Alignment:
BVVHAGGGGGCGRDHHB
-----GGCGGCSG----
Original motif |
Reverse complement motif |
Consensus sequence: BDHHMCGCCCCCTHVBB |
Consensus sequence: BVVHAGGGGGCGRDHHB |
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Motif ID: |
UP00527 |
Motif name: |
Foxn4_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.024557 |
Alignment:
TCDAMVBGACGCMAKDDDVBBD
-----CSGCCGCC---------
Original motif |
Reverse complement motif |
Consensus sequence: DBBVDDDRTRGCGTCBBYTHGA |
Consensus sequence: TCDAMVBGACGCMAKDDDVBBD |
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Motif ID: |
UP00000 |
Motif name: |
Smad3_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
7 |
Number of overlap: |
8 |
Similarity score: |
0.0251911 |
Alignment:
DHHBCCCCGCCAHHBHB
---CSGCCGCC------
Original motif |
Reverse complement motif |
Consensus sequence: DHHBCCCCGCCAHHBHB |
Consensus sequence: BHBHDTGGCGGGGBDHD |
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Motif ID: |
UP00021 |
Motif name: |
Zfp281_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.026934 |
Alignment:
DBCCCCCCCCCCMYC
----CSGCCGCC---
Original motif |
Reverse complement motif |
Consensus sequence: DBCCCCCCCCCCMYC |
Consensus sequence: GKRGGGGGGGGGGBD |
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Dataset #: 1 |
Motif ID: 28 |
Motif name: Motif 28 |
Original motif |
Reverse complement motif |
Consensus sequence: CTTCCTG |
Consensus sequence: CAGGAAG |
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Best Matches for Motif ID 28 (Highest to Lowest)
Motif ID: |
UP00413 |
Motif name: |
Elf4 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
7 |
Similarity score: |
0 |
Alignment:
DBBHACTTCCGGKWTH
-----CTTCCTG----
Original motif |
Reverse complement motif |
Consensus sequence: DBBHACTTCCGGKWTH |
Consensus sequence: HAWYCCGGAAGTHBBD |
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Motif ID: |
UP00404 |
Motif name: |
Elf2 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0.00352958 |
Alignment:
DBBHACTTCCGGDWDB
-----CTTCCTG----
Original motif |
Reverse complement motif |
Consensus sequence: DBBHACTTCCGGDWDB |
Consensus sequence: BDWDCCGGAAGTHBBD |
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Motif ID: |
UP00013 |
Motif name: |
Gabpa_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0.00394394 |
Alignment:
HVHHACCGGAAGTDHHV
-----CAGGAAG-----
Original motif |
Reverse complement motif |
Consensus sequence: HVHHACCGGAAGTDHHV |
Consensus sequence: BHHHACTTCCGGTHHBD |
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Motif ID: |
UP00420 |
Motif name: |
Elk3 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0.00419952 |
Alignment:
DVBBACCGGAAGYDVVV
-----CAGGAAG-----
Original motif |
Reverse complement motif |
Consensus sequence: DVBBACCGGAAGYDVVV |
Consensus sequence: VBVDMCTTCCGGTVBVD |
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Motif ID: |
UP00410 |
Motif name: |
Elk1 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0.006051 |
Alignment:
VVHBACCGGAAGTDBHD
-----CAGGAAG-----
Original motif |
Reverse complement motif |
Consensus sequence: VVHBACCGGAAGTDBHD |
Consensus sequence: DHBDACTTCCGGTVHVB |
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Dataset #: 1 |
Motif ID: 29 |
Motif name: Motif 29 |
Original motif |
Reverse complement motif |
Consensus sequence: CATTTCY |
Consensus sequence: MGAAATG |
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Best Matches for Motif ID 29 (Highest to Lowest)
Motif ID: |
UP00411 |
Motif name: |
Erg |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
7 |
Similarity score: |
0 |
Alignment:
VBBVAYTTCCGGTDDB
---CATTTCY------
Original motif |
Reverse complement motif |
Consensus sequence: VBBVAYTTCCGGTDDB |
Consensus sequence: BDDACCGGAAKTVBVB |
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Motif ID: |
UP00424 |
Motif name: |
Gm4881 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
7 |
Number of overlap: |
7 |
Similarity score: |
3.61876e-06 |
Alignment:
VBBHAYTTCCGGTDDD
---CATTTCY------
Original motif |
Reverse complement motif |
Consensus sequence: VBBHAYTTCCGGTDDD |
Consensus sequence: DHDACCGGAAMTHBVB |
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Motif ID: |
UP00148 |
Motif name: |
Hdx |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
7 |
Similarity score: |
0.000285971 |
Alignment:
DDKDHGAAATCAHHBHV
----MGAAATG------
Original motif |
Reverse complement motif |
Consensus sequence: DDKDHGAAATCAHHBHV |
Consensus sequence: BDBDHTGATTTCDHYDD |
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Motif ID: |
UP00418 |
Motif name: |
Etv6 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
7 |
Similarity score: |
0.00137994 |
Alignment:
DVHBTACTTCCGGHTHB
----CATTTCY------
Original motif |
Reverse complement motif |
Consensus sequence: DVHBTACTTCCGGHTHB |
Consensus sequence: BHAHCCGGAAGTABDVD |
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Motif ID: |
UP00422 |
Motif name: |
Etv3 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
7 |
Similarity score: |
0.00221043 |
Alignment:
VBBHAYTTCCGGTHDH
---CATTTCY------
Original motif |
Reverse complement motif |
Consensus sequence: VBBHAYTTCCGGTHDH |
Consensus sequence: DHHACCGGAAKTHBBB |
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Dataset #: 1 |
Motif ID: 30 |
Motif name: Motif 30 |
Original motif |
Reverse complement motif |
Consensus sequence: CWGCAGC |
Consensus sequence: GCTGCWG |
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Best Matches for Motif ID 30 (Highest to Lowest)
Motif ID: |
UP00052 |
Motif name: |
Osr2_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
7 |
Similarity score: |
0 |
Alignment:
HHHHGCTACKGTHVHH
----GCTGCWG-----
Original motif |
Reverse complement motif |
Consensus sequence: HHVHACRGTAGCHHHD |
Consensus sequence: HHHHGCTACKGTHVHH |
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Motif ID: |
UP00027 |
Motif name: |
Osr1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0.00152865 |
Alignment:
DHBHGCTACKGTHDHH
----GCTGCWG-----
Original motif |
Reverse complement motif |
Consensus sequence: HHDHACRGTAGCHVHD |
Consensus sequence: DHBHGCTACKGTHDHH |
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Motif ID: |
UP00099 |
Motif name: |
Ascl2_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
8 |
Number of overlap: |
7 |
Similarity score: |
0.00352181 |
Alignment:
HHDVVGCAGCTGVBKVB
---CWGCAGC-------
Original motif |
Reverse complement motif |
Consensus sequence: BBYVVCAGCTGCBVHHD |
Consensus sequence: HHDVVGCAGCTGVBKVB |
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Motif ID: |
UP00102 |
Motif name: |
Zic1_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
7 |
Similarity score: |
0.0201867 |
Alignment:
BHDCVCAGCAGGHVD
-----CWGCAGC---
Original motif |
Reverse complement motif |
Consensus sequence: BHDCVCAGCAGGHVD |
Consensus sequence: DVHCCTGCTGBGDDB |
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Motif ID: |
UP00057 |
Motif name: |
Zic2_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0.0241363 |
Alignment:
DVBCYTGCTGBGDDD
---GCTGCWG-----
Original motif |
Reverse complement motif |
Consensus sequence: HHDCVCAGCAKGVVD |
Consensus sequence: DVBCYTGCTGBGDDD |
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Dataset #: 1 |
Motif ID: 31 |
Motif name: Motif 31 |
Original motif |
Reverse complement motif |
Consensus sequence: CATGYACA |
Consensus sequence: TGTKCATG |
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Best Matches for Motif ID 31 (Highest to Lowest)
Motif ID: |
UP00150 |
Motif name: |
Irx6 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.00505399 |
Alignment:
HAHDTACATGTAVDWHT
------CATGYACA---
Original motif |
Reverse complement motif |
Consensus sequence: HAHDTACATGTAVDWHT |
Consensus sequence: AHWDBTACATGTADHTH |
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Motif ID: |
UP00097 |
Motif name: |
Mtf1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.00507655 |
Alignment:
HDYTTGCACACGDHBH
--CATGYACA------
Original motif |
Reverse complement motif |
Consensus sequence: DBDHCGTGTGCAAMDH |
Consensus sequence: HDYTTGCACACGDHBH |
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Motif ID: |
UP00223 |
Motif name: |
Irx3_2226.1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0.00836655 |
Alignment:
DHDWBTACATGTAHDDD
-------CATGYACA--
Original motif |
Reverse complement motif |
Consensus sequence: DDDHTACATGTAVWDHD |
Consensus sequence: DHDWBTACATGTAHDDD |
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Motif ID: |
UP00179 |
Motif name: |
Pou2f3 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.00847056 |
Alignment:
BHDTATGCAAATBHDV
---CATGYACA-----
Original motif |
Reverse complement motif |
Consensus sequence: BHDTATGCAAATBHDV |
Consensus sequence: BHHVATTTGCATAHHV |
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Motif ID: |
UP00191 |
Motif name: |
Pou2f2 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.00973489 |
Alignment:
BHDTATGCAAATDHDV
---CATGYACA-----
Original motif |
Reverse complement motif |
Consensus sequence: BHDTATGCAAATDHDV |
Consensus sequence: BHHDATTTGCATAHHV |
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Dataset #: 1 |
Motif ID: 32 |
Motif name: Motif 32 |
Original motif |
Reverse complement motif |
Consensus sequence: KAATAAA |
Consensus sequence: TTTATTY |
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Best Matches for Motif ID 32 (Highest to Lowest)
Motif ID: |
UP00180 |
Motif name: |
Hoxd13 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0 |
Alignment:
HDHHTTTTATTKKHDD
-----TTTATTY----
Original motif |
Reverse complement motif |
Consensus sequence: HDHYYAATAAAAHHHH |
Consensus sequence: HDHHTTTTATTKKHDD |
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Motif ID: |
UP00133 |
Motif name: |
Cdx2 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0.000531578 |
Alignment:
HRHTTTTATYMCCVBD
----TTTATTY-----
Original motif |
Reverse complement motif |
Consensus sequence: DVVGGYMATAAAAHKH |
Consensus sequence: HRHTTTTATYMCCVBD |
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Motif ID: |
UP00134 |
Motif name: |
Hoxb13 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0.00373425 |
Alignment:
VRHCCAATAAAAWHHV
----KAATAAA-----
Original motif |
Reverse complement motif |
Consensus sequence: VRHCCAATAAAAWHHV |
Consensus sequence: VDHWTTTTATTGGDKB |
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Motif ID: |
UP00121 |
Motif name: |
Hoxd10 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
7 |
Similarity score: |
0.00617561 |
Alignment:
VDKVYAATAAAATDDDH
----KAATAAA------
Original motif |
Reverse complement motif |
Consensus sequence: VDKVYAATAAAATDDDH |
Consensus sequence: HDDDATTTTATTKVRDB |
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Motif ID: |
UP00217 |
Motif name: |
Hoxa10 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0.00873461 |
Alignment:
DHBGYAATAAAATDHW
----KAATAAA-----
Original motif |
Reverse complement motif |
Consensus sequence: DHBGYAATAAAATDHW |
Consensus sequence: WDDATTTTATTMCBHD |
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Dataset #: 1 |
Motif ID: 33 |
Motif name: Motif 33 |
Original motif |
Reverse complement motif |
Consensus sequence: CTGGCTWC |
Consensus sequence: GWAGCCAG |
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Best Matches for Motif ID 33 (Highest to Lowest)
Motif ID: |
UP00527 |
Motif name: |
Foxn4_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
TCDAMVBGACGCMAKDDDVBBD
-------GWAGCCAG-------
Original motif |
Reverse complement motif |
Consensus sequence: DBBVDDDRTRGCGTCBBYTHGA |
Consensus sequence: TCDAMVBGACGCMAKDDDVBBD |
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Motif ID: |
UP00045 |
Motif name: |
Mafb_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.00527751 |
Alignment:
DMTWDGTCAGCADWTTH
--GWAGCCAG-------
Original motif |
Reverse complement motif |
Consensus sequence: HAAWDTGCTGACDWARH |
Consensus sequence: DMTWDGTCAGCADWTTH |
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Motif ID: |
UP00000 |
Motif name: |
Smad3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
8 |
Similarity score: |
0.0073813 |
Alignment:
HDHDDCCAGACABBHVH
-GWAGCCAG--------
Original motif |
Reverse complement motif |
Consensus sequence: HDHDDCCAGACABBHVH |
Consensus sequence: HVHBVTGTCTGGDDHDD |
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Motif ID: |
UP00052 |
Motif name: |
Osr2_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
2 |
Number of overlap: |
8 |
Similarity score: |
0.00888762 |
Alignment:
HHVHACRGTAGCHHHD
-------GWAGCCAG-
Original motif |
Reverse complement motif |
Consensus sequence: HHVHACRGTAGCHHHD |
Consensus sequence: HHHHGCTACKGTHVHH |
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Motif ID: |
UP00027 |
Motif name: |
Osr1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
2 |
Number of overlap: |
8 |
Similarity score: |
0.00951832 |
Alignment:
HHDHACRGTAGCHVHD
-------GWAGCCAG-
Original motif |
Reverse complement motif |
Consensus sequence: HHDHACRGTAGCHVHD |
Consensus sequence: DHBHGCTACKGTHDHH |
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Dataset #: 1 |
Motif ID: 34 |
Motif name: Motif 34 |
Original motif |
Reverse complement motif |
Consensus sequence: TGKCCACA |
Consensus sequence: TGTGGYCA |
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Best Matches for Motif ID 34 (Highest to Lowest)
Motif ID: |
UP00026 |
Motif name: |
Zscan4_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
HDHTMTGTGCACADVHD
-----TGKCCACA----
Original motif |
Reverse complement motif |
Consensus sequence: DHVDTGTGCACAYAHDH |
Consensus sequence: HDHTMTGTGCACADVHD |
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Motif ID: |
UP00042 |
Motif name: |
Gm397_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.00132554 |
Alignment:
HHRTATGTGCACATHHD
-----TGKCCACA----
Original motif |
Reverse complement motif |
Consensus sequence: HHDATGTGCACATAMDH |
Consensus sequence: HHRTATGTGCACATHHD |
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Motif ID: |
UP00539 |
Motif name: |
Gli2_v016060_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
7 |
Number of overlap: |
8 |
Similarity score: |
0.0066252 |
Alignment:
DBCDWHCTGGGTGGTCMDHBBAH
---------TGTGGYCA------
Original motif |
Reverse complement motif |
Consensus sequence: DTVBDDRGACCACCCAGDWDGBH |
Consensus sequence: DBCDWHCTGGGTGGTCMDHBBAH |
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Motif ID: |
UP00538 |
Motif name: |
Gli1_v015681_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
10 |
Number of overlap: |
8 |
Similarity score: |
0.00683926 |
Alignment:
BTBVTCVTGGGTGGTCMVVDVBB
---------TGTGGYCA------
Original motif |
Reverse complement motif |
Consensus sequence: BBBDVVRGACCACCCAVGABBAB |
Consensus sequence: BTBVTCVTGGGTGGTCMVVDVBB |
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Motif ID: |
UP00053 |
Motif name: |
Rxra_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.00716059 |
Alignment:
VHBHDGGGGTCAHBHBD
----TGTGGYCA-----
Original motif |
Reverse complement motif |
Consensus sequence: DBHBDTGACCCCDHVHB |
Consensus sequence: VHBHDGGGGTCAHBHBD |
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Dataset #: 1 |
Motif ID: 35 |
Motif name: Motif 35 |
Original motif |
Reverse complement motif |
Consensus sequence: ACAACCAY |
Consensus sequence: KTGGTTGT |
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Best Matches for Motif ID 35 (Highest to Lowest)
Motif ID: |
UP00047 |
Motif name: |
Zbtb7b_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
7 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
BDDRVGACCACCHBDVB
------ACAACCAY---
Original motif |
Reverse complement motif |
Consensus sequence: BDDRVGACCACCHBDVB |
Consensus sequence: BBDVHGGTGGTCBKDDB |
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Motif ID: |
UP00227 |
Motif name: |
Duxl |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.00363031 |
Alignment:
VHVVGTTGATTGGGTMK
-----KTGGTTGT----
Original motif |
Reverse complement motif |
Consensus sequence: YRACCCAATCAACVVHV |
Consensus sequence: VHVVGTTGATTGGGTMK |
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Motif ID: |
UP00166 |
Motif name: |
Barhl1 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0.00780833 |
Alignment:
DDVKTAATTGGTTDTH
-------KTGGTTGT-
Original motif |
Reverse complement motif |
Consensus sequence: HAHAACCAATTARBDH |
Consensus sequence: DDVKTAATTGGTTDTH |
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Motif ID: |
UP00540 |
Motif name: |
Gli3_v015681_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
10 |
Number of overlap: |
8 |
Similarity score: |
0.0118241 |
Alignment:
YBVDMGTGGGTGGTCKVVBVBBT
------KTGGTTGT---------
Original motif |
Reverse complement motif |
Consensus sequence: ABBBBVVRGACCACCCACRDBBM |
Consensus sequence: YBVDMGTGGGTGGTCKVVBVBBT |
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Motif ID: |
UP00539 |
Motif name: |
Gli2_v015681_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.0118666 |
Alignment:
CBDMCMGGGTGGTCCHVBVBAH
-----KTGGTTGT---------
Original motif |
Reverse complement motif |
Consensus sequence: HTBVVVDGGACCACCCRGRDBG |
Consensus sequence: CBDMCMGGGTGGTCCHVBVBAH |
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Dataset #: 1 |
Motif ID: 36 |
Motif name: Motif 36 |
Original motif |
Reverse complement motif |
Consensus sequence: TCCTGGRA |
Consensus sequence: TMCCAGGA |
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Best Matches for Motif ID 36 (Highest to Lowest)
Motif ID: |
UP00043 |
Motif name: |
Bcl6b_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
VHHATTCCTYGAAAGD
-----TCCTGGRA---
Original motif |
Reverse complement motif |
Consensus sequence: DCTTTCKAGGAATHHV |
Consensus sequence: VHHATTCCTYGAAAGD |
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Motif ID: |
UP00038 |
Motif name: |
Spdef_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
8 |
Similarity score: |
0.00573581 |
Alignment:
VDWYTAGGATGTHVDH
-TMCCAGGA-------
Original motif |
Reverse complement motif |
Consensus sequence: DDBHACATCCTAKWDV |
Consensus sequence: VDWYTAGGATGTHVDH |
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Motif ID: |
UP00413 |
Motif name: |
Elf4 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
7 |
Number of overlap: |
8 |
Similarity score: |
0.00675491 |
Alignment:
HAWYCCGGAAGTHBBD
--TCCTGGRA------
Original motif |
Reverse complement motif |
Consensus sequence: DBBHACTTCCGGKWTH |
Consensus sequence: HAWYCCGGAAGTHBBD |
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Motif ID: |
UP00033 |
Motif name: |
Zfp410_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0.0109341 |
Alignment:
BDDYYCATCCCATDDBD
-------TMCCAGGA--
Original motif |
Reverse complement motif |
Consensus sequence: DVDDATGGGATGKMDDV |
Consensus sequence: BDDYYCATCCCATDDBD |
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Motif ID: |
UP00410 |
Motif name: |
Elk1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.012227 |
Alignment:
DHBDACTTCCGGTVHVB
-------TCCTGGRA--
Original motif |
Reverse complement motif |
Consensus sequence: VVHBACCGGAAGTDBHD |
Consensus sequence: DHBDACTTCCGGTVHVB |
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Dataset #: 1 |
Motif ID: 37 |
Motif name: Motif 37 |
Original motif |
Reverse complement motif |
Consensus sequence: CTGAGCYA |
Consensus sequence: TKGCTCAG |
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Best Matches for Motif ID 37 (Highest to Lowest)
Motif ID: |
UP00098 |
Motif name: |
Rfx3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
HHHHDVVGTTGCTAHGGDHBAHH
--------TKGCTCAG-------
Original motif |
Reverse complement motif |
Consensus sequence: HDTBHHCCHTAGCAACVVDHHHH |
Consensus sequence: HHHHDVVGTTGCTAHGGDHBAHH |
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Motif ID: |
UP00103 |
Motif name: |
Jundm2_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.00321157 |
Alignment:
HDDKTGASTCAKHRDB
----TKGCTCAG----
Original motif |
Reverse complement motif |
Consensus sequence: VDKDRTGASTCAYHDH |
Consensus sequence: HDDKTGASTCAKHRDB |
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Motif ID: |
UP00076 |
Motif name: |
Rfxdc2_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.00414765 |
Alignment:
DVSGTTGCTAHGVBB
----TKGCTCAG---
Original motif |
Reverse complement motif |
Consensus sequence: BBVCHTAGCAACSVD |
Consensus sequence: DVSGTTGCTAHGVBB |
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Motif ID: |
UP00056 |
Motif name: |
Rfx4_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.00415736 |
Alignment:
DVSGTTGCTAHGGHV
----TKGCTCAG---
Original motif |
Reverse complement motif |
Consensus sequence: BHCCHTAGCAACSVD |
Consensus sequence: DVSGTTGCTAHGGHV |
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Motif ID: |
UP00045 |
Motif name: |
Mafb_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.0106486 |
Alignment:
DMTWDGTCAGCADWTTH
--TKGCTCAG-------
Original motif |
Reverse complement motif |
Consensus sequence: HAAWDTGCTGACDWARH |
Consensus sequence: DMTWDGTCAGCADWTTH |
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Dataset #: 1 |
Motif ID: 38 |
Motif name: Motif 38 |
Original motif |
Reverse complement motif |
Consensus sequence: GAGTTACA |
Consensus sequence: TGTAACTC |
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Best Matches for Motif ID 38 (Highest to Lowest)
Motif ID: |
UP00056 |
Motif name: |
Rfx4_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
HHBCHTRGWTACVVH
-----GAGTTACA--
Original motif |
Reverse complement motif |
Consensus sequence: HHBCHTRGWTACVVH |
Consensus sequence: HVVGTAWCKADGBHH |
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Motif ID: |
UP00103 |
Motif name: |
Jundm2_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.00296274 |
Alignment:
VDKDRTGASTCAYHDH
------GAGTTACA--
Original motif |
Reverse complement motif |
Consensus sequence: VDKDRTGASTCAYHDH |
Consensus sequence: HDDKTGASTCAKHRDB |
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Motif ID: |
UP00193 |
Motif name: |
Rhox11_1765.2 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.00944938 |
Alignment:
AVDVCGCTGTWAWDVVW
-------TGTAACTC--
Original motif |
Reverse complement motif |
Consensus sequence: AVDVCGCTGTWAWDVVW |
Consensus sequence: WVVHWTWACAGCGBHBT |
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Motif ID: |
UP00205 |
Motif name: |
Pknox2 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
2 |
Number of overlap: |
8 |
Similarity score: |
0.00964683 |
Alignment:
HAVSRSCTGTCAATHB
-------TGTAACTC-
Original motif |
Reverse complement motif |
Consensus sequence: HAVSRSCTGTCAATHB |
Consensus sequence: VHATTGACAGSKSVTH |
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Motif ID: |
UP00236 |
Motif name: |
Irx2 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
8 |
Similarity score: |
0.00974779 |
Alignment:
WVWDDTACATGTADDDW
-GAGTTACA--------
Original motif |
Reverse complement motif |
Consensus sequence: WDDDTACATGTADDWBW |
Consensus sequence: WVWDDTACATGTADDDW |
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Dataset #: 1 |
Motif ID: 39 |
Motif name: Motif 39 |
Original motif |
Reverse complement motif |
Consensus sequence: BAGAAA |
Consensus sequence: TTTCTB |
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Best Matches for Motif ID 39 (Highest to Lowest)
Motif ID: |
UP00040 |
Motif name: |
Irf5_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
6 |
Similarity score: |
0 |
Alignment:
BDKGTTTCGKTWDDD
----TTTCTB-----
Original motif |
Reverse complement motif |
Consensus sequence: DDDWAYCGAAACYDV |
Consensus sequence: BDKGTTTCGKTWDDD |
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Motif ID: |
UP00018 |
Motif name: |
Irf4_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
6 |
Similarity score: |
0.00208221 |
Alignment:
VDDAYCGAAACYDVA
----BAGAAA-----
Original motif |
Reverse complement motif |
Consensus sequence: VDDAYCGAAACYDVA |
Consensus sequence: TBDKGTTTCGMTDHV |
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Motif ID: |
UP00032 |
Motif name: |
Gata3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
11 |
Number of overlap: |
6 |
Similarity score: |
0.00450619 |
Alignment:
BDHDDADAGATAAGADHBDHVD
------BAGAAA----------
Original motif |
Reverse complement motif |
Consensus sequence: BDHDDADAGATAAGADHBDHVD |
Consensus sequence: HBHDVHDTCTTATCTHTDDHDV |
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Motif ID: |
UP00074 |
Motif name: |
Isgf3g_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
6 |
Similarity score: |
0.00517682 |
Alignment:
TDAGTTTCGWTTKDV
----TTTCTB-----
Original motif |
Reverse complement motif |
Consensus sequence: VDRAAWCGAAACTDA |
Consensus sequence: TDAGTTTCGWTTKDV |
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Motif ID: |
UP00011 |
Motif name: |
Irf6_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
8 |
Number of overlap: |
6 |
Similarity score: |
0.00721031 |
Alignment:
HDDAHCGAAACYAVDDD
----BAGAAA-------
Original motif |
Reverse complement motif |
Consensus sequence: HDDAHCGAAACYAVDDD |
Consensus sequence: DHDBTKGTTTCGHTHDD |
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Dataset #: 1 |
Motif ID: 40 |
Motif name: Motif 40 |
Original motif |
Reverse complement motif |
Consensus sequence: ARTCCCAG |
Consensus sequence: CTGGGAMT |
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Best Matches for Motif ID 40 (Highest to Lowest)
Motif ID: |
UP00216 |
Motif name: |
Obox1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
DHDGTTAATCCCCKTDD
------ARTCCCAG---
Original motif |
Reverse complement motif |
Consensus sequence: DDARGGGGATTAACDHH |
Consensus sequence: DHDGTTAATCCCCKTDD |
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Motif ID: |
UP00229 |
Motif name: |
Otx1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0.00997246 |
Alignment:
VHHWATTAATCCCMDHH
-------ARTCCCAG--
Original motif |
Reverse complement motif |
Consensus sequence: DDDRGGGATTAATWHHB |
Consensus sequence: VHHWATTAATCCCMDHH |
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Motif ID: |
UP00160 |
Motif name: |
Obox3 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
7 |
Number of overlap: |
8 |
Similarity score: |
0.0101137 |
Alignment:
HHWGTTAATCCCCCBBH
------ARTCCCAG---
Original motif |
Reverse complement motif |
Consensus sequence: HBVGGGGGATTAACWHH |
Consensus sequence: HHWGTTAATCCCCCBBH |
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Motif ID: |
UP00033 |
Motif name: |
Zfp410_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.0101427 |
Alignment:
BDDYYCATCCCATDDBD
-----ARTCCCAG----
Original motif |
Reverse complement motif |
Consensus sequence: DVDDATGGGATGKMDDV |
Consensus sequence: BDDYYCATCCCATDDBD |
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Motif ID: |
UP00208 |
Motif name: |
Obox5_2284.1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.0112114 |
Alignment:
DHHAHTTAATCCCKVDH
-------ARTCCCAG--
Original motif |
Reverse complement motif |
Consensus sequence: HDVRGGGATTAAHTHHH |
Consensus sequence: DHHAHTTAATCCCKVDH |
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Dataset #: 1 |
Motif ID: 41 |
Motif name: Motif 41 |
Original motif |
Reverse complement motif |
Consensus sequence: CCTGCTGK |
Consensus sequence: YCAGCAGG |
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Best Matches for Motif ID 41 (Highest to Lowest)
Motif ID: |
UP00102 |
Motif name: |
Zic1_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
DVHCCTGCTGBGDDB
---CCTGCTGK----
Original motif |
Reverse complement motif |
Consensus sequence: BHDCVCAGCAGGHVD |
Consensus sequence: DVHCCTGCTGBGDDB |
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Motif ID: |
UP00057 |
Motif name: |
Zic2_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.0043517 |
Alignment:
DVBCYTGCTGBGDDD
---CCTGCTGK----
Original motif |
Reverse complement motif |
Consensus sequence: HHDCVCAGCAKGVVD |
Consensus sequence: DVBCYTGCTGBGDDD |
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Motif ID: |
UP00006 |
Motif name: |
Zic3_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.00761363 |
Alignment:
DVHCYTGCTGTGHDH
---CCTGCTGK----
Original motif |
Reverse complement motif |
Consensus sequence: DDDCACAGCAKGHVD |
Consensus sequence: DVHCYTGCTGTGHDH |
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Motif ID: |
UP00045 |
Motif name: |
Mafb_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
7 |
Number of overlap: |
8 |
Similarity score: |
0.0402767 |
Alignment:
DMTWDGTCAGCADWTTH
------YCAGCAGG---
Original motif |
Reverse complement motif |
Consensus sequence: HAAWDTGCTGACDWARH |
Consensus sequence: DMTWDGTCAGCADWTTH |
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Motif ID: |
UP00046 |
Motif name: |
Tcfe2a_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
8 |
Similarity score: |
0.0490068 |
Alignment:
VBHHVCAGGTGCDVDHD
-YCAGCAGG--------
Original motif |
Reverse complement motif |
Consensus sequence: VBHHVCAGGTGCDVDHD |
Consensus sequence: DHDBHGCACCTGBDDVB |
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Dataset #: 1 |
Motif ID: 42 |
Motif name: Motif 42 |
Original motif |
Reverse complement motif |
Consensus sequence: CGCGCSG |
Consensus sequence: CSGCGCG |
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Best Matches for Motif ID 42 (Highest to Lowest)
Motif ID: |
UP00003 |
Motif name: |
E2F3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
8 |
Number of overlap: |
7 |
Similarity score: |
0 |
Alignment:
WHSGCGCGCCHTDHB
-CSGCGCG-------
Original motif |
Reverse complement motif |
Consensus sequence: VHDADGGCGCGCSHW |
Consensus sequence: WHSGCGCGCCHTDHB |
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Motif ID: |
UP00001 |
Motif name: |
E2F2_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
7 |
Similarity score: |
0.000129734 |
Alignment:
HHVGCGCGCCKTDHB
----CGCGCSG----
Original motif |
Reverse complement motif |
Consensus sequence: VHDARGGCGCGCVHH |
Consensus sequence: HHVGCGCGCCKTDHB |
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Motif ID: |
UP00065 |
Motif name: |
Zfp161_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
7 |
Similarity score: |
0.0145336 |
Alignment:
DMMDGMGCGCGCGCHD
-------CGCGCSG--
Original motif |
Reverse complement motif |
Consensus sequence: DDGCGCGCGCRCHYRD |
Consensus sequence: DMMDGMGCGCGCGCHD |
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Motif ID: |
UP00065 |
Motif name: |
Zfp161_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
7 |
Similarity score: |
0.016879 |
Alignment:
VVGCVMTGCGCGKC
-----CSGCGCG--
Original motif |
Reverse complement motif |
Consensus sequence: GYCGCGCARBGCVB |
Consensus sequence: VVGCVMTGCGCGKC |
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Motif ID: |
UP00526 |
Motif name: |
Foxn1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
7 |
Similarity score: |
0.0219936 |
Alignment:
HDWHMHGACGCGCGTRBVVBHW
-------CSGCGCG--------
Original motif |
Reverse complement motif |
Consensus sequence: WHVBVVMACGCGCGTCDYHWDH |
Consensus sequence: HDWHMHGACGCGCGTRBVVBHW |
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Dataset #: 1 |
Motif ID: 43 |
Motif name: Motif 43 |
Original motif |
Reverse complement motif |
Consensus sequence: ACATYTA |
Consensus sequence: TAMATGT |
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Best Matches for Motif ID 43 (Highest to Lowest)
Motif ID: |
UP00236 |
Motif name: |
Irx2 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0 |
Alignment:
WVWDDTACATGTADDDW
-----TAMATGT-----
Original motif |
Reverse complement motif |
Consensus sequence: WDDDTACATGTADDWBW |
Consensus sequence: WVWDDTACATGTADDDW |
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Motif ID: |
UP00150 |
Motif name: |
Irx6 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
3.6652e-05 |
Alignment:
AHWDBTACATGTADHTH
-----TAMATGT-----
Original motif |
Reverse complement motif |
Consensus sequence: HAHDTACATGTAVDWHT |
Consensus sequence: AHWDBTACATGTADHTH |
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Motif ID: |
UP00223 |
Motif name: |
Irx3_2226.1 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0.000501187 |
Alignment:
DHDWBTACATGTAHDDD
-----TAMATGT-----
Original motif |
Reverse complement motif |
Consensus sequence: DDDHTACATGTAVWDHD |
Consensus sequence: DHDWBTACATGTAHDDD |
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Motif ID: |
UP00223 |
Motif name: |
Irx3_0920.1 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0.00389424 |
Alignment:
DDWWBTACATGTADDDD
-----TAMATGT-----
Original motif |
Reverse complement motif |
Consensus sequence: DDDDTACATGTAVWWHD |
Consensus sequence: DDWWBTACATGTADDDD |
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Motif ID: |
UP00250 |
Motif name: |
Irx5 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0.0071841 |
Alignment:
WVTDHWACATGTWHDDD
-----TAMATGT-----
Original motif |
Reverse complement motif |
Consensus sequence: DDDHWACATGTWHDABW |
Consensus sequence: WVTDHWACATGTWHDDD |
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Dataset #: 1 |
Motif ID: 44 |
Motif name: Motif 44 |
Original motif |
Reverse complement motif |
Consensus sequence: GDAAACA |
Consensus sequence: TGTTTDC |
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Best Matches for Motif ID 44 (Highest to Lowest)
Motif ID: |
UP00025 |
Motif name: |
Foxk1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0 |
Alignment:
BBVTTTGTTTACATTDD
-----TGTTTDC-----
Original motif |
Reverse complement motif |
Consensus sequence: DDAATGTAAACAAAVVB |
Consensus sequence: BBVTTTGTTTACATTDD |
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|
|
Motif ID: |
UP00073 |
Motif name: |
Foxa2_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0.00709733 |
Alignment:
BDVTTTKTTTACWTWHH
-----TGTTTDC-----
Original motif |
Reverse complement motif |
Consensus sequence: HHWAWGTAAAYAAAVDB |
Consensus sequence: BDVTTTKTTTACWTWHH |
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Motif ID: |
UP00061 |
Motif name: |
Foxl1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0.00723594 |
Alignment:
DWAATRTAAACAAWVVB
-----GDAAACA-----
Original motif |
Reverse complement motif |
Consensus sequence: DWAATRTAAACAAWVVB |
Consensus sequence: VVVWTTGTTTAMATTWD |
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|
Motif ID: |
UP00039 |
Motif name: |
Foxj3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0.0079365 |
Alignment:
HDHADGTAAACAAAVVH
-----GDAAACA-----
Original motif |
Reverse complement motif |
Consensus sequence: HDHADGTAAACAAAVVH |
Consensus sequence: DVVTTTGTTTACDTHDH |
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|
Motif ID: |
UP00041 |
Motif name: |
Foxj1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
7 |
Number of overlap: |
7 |
Similarity score: |
0.0162324 |
Alignment:
DDDHTTTGTTTAMHDH
------TGTTTDC---
Original motif |
Reverse complement motif |
Consensus sequence: HDHRTAAACAAAHDDD |
Consensus sequence: DDDHTTTGTTTAMHDH |
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Dataset #: 1 |
Motif ID: 45 |
Motif name: Motif 45 |
Original motif |
Reverse complement motif |
Consensus sequence: GSAGAGA |
Consensus sequence: TCTCTSC |
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Best Matches for Motif ID 45 (Highest to Lowest)
Motif ID: |
UP00031 |
Motif name: |
Zbtb3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
7 |
Similarity score: |
0 |
Alignment:
DDBBBCACTGCABTBBB
----TCTCTSC------
Original motif |
Reverse complement motif |
Consensus sequence: DDBBBCACTGCABTBBB |
Consensus sequence: BBBAVTGCAGTGBBVDD |
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|
|
|
Motif ID: |
UP00018 |
Motif name: |
Irf4_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0.00147657 |
Alignment:
BHHWCCGAGAMTVVB
---GSAGAGA-----
Original motif |
Reverse complement motif |
Consensus sequence: VVBAYTCTCGGWHDB |
Consensus sequence: BHHWCCGAGAMTVVB |
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|
|
|
Motif ID: |
UP00040 |
Motif name: |
Irf5_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0.00225471 |
Alignment:
BHDAHCGAGARTHBV
---GSAGAGA-----
Original motif |
Reverse complement motif |
Consensus sequence: BHDAHCGAGARTHBV |
Consensus sequence: VBHAKTCTCGHTHHV |
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|
|
|
Motif ID: |
UP00026 |
Motif name: |
Zscan4_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
7 |
Similarity score: |
0.00336112 |
Alignment:
HDHTMTGTGCACADVHD
---TCTCTSC-------
Original motif |
Reverse complement motif |
Consensus sequence: DHVDTGTGCACAYAHDH |
Consensus sequence: HDHTMTGTGCACADVHD |
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|
|
|
Motif ID: |
UP00032 |
Motif name: |
Gata3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0.00351001 |
Alignment:
BDHDDADAGATAAGADHBDHVD
-----GSAGAGA----------
Original motif |
Reverse complement motif |
Consensus sequence: BDHDDADAGATAAGADHBDHVD |
Consensus sequence: HBHDVHDTCTTATCTHTDDHDV |
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|
|
|
Dataset #: 2 |
Motif ID: 46 |
Motif name: Motif 46 |
Original motif |
Reverse complement motif |
Consensus sequence: AGRKGGCR |
Consensus sequence: KGCCYKCT |
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|
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Best Matches for Motif ID 46 (Highest to Lowest)
Motif ID: |
UP00002 |
Motif name: |
Sp4_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
BVVHAGGGGGCGRDHHB
----AGRKGGCR-----
Original motif |
Reverse complement motif |
Consensus sequence: BDHHMCGCCCCCTHVBB |
Consensus sequence: BVVHAGGGGGCGRDHHB |
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|
|
|
Motif ID: |
UP00079 |
Motif name: |
Esrra_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.0154192 |
Alignment:
VKBBAGGGGTCAHDBBH
----AGRKGGCR-----
Original motif |
Reverse complement motif |
Consensus sequence: VKBBAGGGGTCAHDBBH |
Consensus sequence: DBBHHTGACCCCTBBYV |
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|
|
|
Motif ID: |
UP00007 |
Motif name: |
Egr1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.0160089 |
Alignment:
VHTGCGGGGGCGGH
----AGRKGGCR--
Original motif |
Reverse complement motif |
Consensus sequence: HCCGCCCCCGCAHB |
Consensus sequence: VHTGCGGGGGCGGH |
|
|
|
|
Motif ID: |
UP00010 |
Motif name: |
Tcfap2b_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.0241611 |
Alignment:
HTGCCMTVKGGCMD
-KGCCYKCT-----
Original motif |
Reverse complement motif |
Consensus sequence: DYGCCYBARGGCAH |
Consensus sequence: HTGCCMTVKGGCMD |
|
|
|
|
Motif ID: |
UP00070 |
Motif name: |
Gcm1_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0.0267457 |
Alignment:
DDBVHATAGGGGRBRMB
-------AGRKGGCR--
Original motif |
Reverse complement motif |
Consensus sequence: DDBVHATAGGGGRBRMB |
Consensus sequence: BYMBKCCCCTATDVBHD |
|
|
|
|
Dataset #: 2 |
Motif ID: 47 |
Motif name: Motif 47 |
Original motif |
Reverse complement motif |
Consensus sequence: CAGYDCC |
Consensus sequence: GGDKCTG |
|
|
|
|
Best Matches for Motif ID 47 (Highest to Lowest)
Motif ID: |
UP00205 |
Motif name: |
Pknox2 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
8 |
Number of overlap: |
7 |
Similarity score: |
0.0213831 |
Alignment:
HAVSRSCTGTCAATHB
--GGDKCTG-------
Original motif |
Reverse complement motif |
Consensus sequence: HAVSRSCTGTCAATHB |
Consensus sequence: VHATTGACAGSKSVTH |
|
|
|
|
Motif ID: |
UP00122 |
Motif name: |
Tgif1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
7 |
Similarity score: |
0.0245571 |
Alignment:
DABWWTGACAGCTVVBD
--------CAGYDCC--
Original motif |
Reverse complement motif |
Consensus sequence: DABWWTGACAGCTVVBD |
Consensus sequence: DBVVAGCTGTCAWWVTH |
|
|
|
|
Motif ID: |
UP00203 |
Motif name: |
Pknox1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
7 |
Similarity score: |
0.0300471 |
Alignment:
VVWTTGACAGSTSBKD
-------CAGYDCC--
Original motif |
Reverse complement motif |
Consensus sequence: DRVSASCTGTCAAWVV |
Consensus sequence: VVWTTGACAGSTSBKD |
|
|
|
|
Motif ID: |
UP00258 |
Motif name: |
Tgif2 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
7 |
Similarity score: |
0.0300683 |
Alignment:
VBWTTGACAGCTVBTT
-------CAGYDCC--
Original motif |
Reverse complement motif |
Consensus sequence: AABBAGCTGTCAAWVV |
Consensus sequence: VBWTTGACAGCTVBTT |
|
|
|
|
Motif ID: |
UP00193 |
Motif name: |
Rhox11_2205.1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
9 |
Number of overlap: |
7 |
Similarity score: |
0.0305033 |
Alignment:
WVVHWTWACAGCGHHVT
--------CAGYDCC--
Original motif |
Reverse complement motif |
Consensus sequence: AVDHCGCTGTWAWDVVW |
Consensus sequence: WVVHWTWACAGCGHHVT |
|
|
|
|
Dataset #: 2 |
Motif ID: 48 |
Motif name: Motif 48 |
Original motif |
Reverse complement motif |
Consensus sequence: CCACYAGR |
Consensus sequence: MCTKGTGG |
|
|
|
|
Best Matches for Motif ID 48 (Highest to Lowest)
Motif ID: |
UP00538 |
Motif name: |
Gli1_v016060_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
7 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
HGDHVHKGACCACCCGGBGBGDB
---------CCACYAGR------
Original motif |
Reverse complement motif |
Consensus sequence: BHCBCBCCGGGTGGTCYHVHDCH |
Consensus sequence: HGDHVHKGACCACCCGGBGBGDB |
|
|
|
|
Motif ID: |
UP00539 |
Motif name: |
Gli2_v015681_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
11 |
Number of overlap: |
8 |
Similarity score: |
0.000875703 |
Alignment:
CBDMCMGGGTGGTCCHVBVBAH
----MCTKGTGG----------
Original motif |
Reverse complement motif |
Consensus sequence: HTBVVVDGGACCACCCRGRDBG |
Consensus sequence: CBDMCMGGGTGGTCCHVBVBAH |
|
|
|
|
Motif ID: |
UP00047 |
Motif name: |
Zbtb7b_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.00261558 |
Alignment:
BDDRVGACCACCHBDVB
-------CCACYAGR--
Original motif |
Reverse complement motif |
Consensus sequence: BDDRVGACCACCHBDVB |
Consensus sequence: BBDVHGGTGGTCBKDDB |
|
|
|
|
Motif ID: |
UP00540 |
Motif name: |
Gli3_v016060_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.00296024 |
Alignment:
CVHBSCGGGTGGTCMHVHHCDH
----MCTKGTGG----------
Original motif |
Reverse complement motif |
Consensus sequence: HDGHHBHRGACCACCCGSVDVG |
Consensus sequence: CVHBSCGGGTGGTCMHVHHCDH |
|
|
|
|
Motif ID: |
UP00046 |
Motif name: |
Tcfe2a_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.0161251 |
Alignment:
VBHHVCAGGTGCDVDHD
----MCTKGTGG-----
Original motif |
Reverse complement motif |
Consensus sequence: VBHHVCAGGTGCDVDHD |
Consensus sequence: DHDBHGCACCTGBDDVB |
|
|
|
|
Dataset #: 2 |
Motif ID: 49 |
Motif name: Motif 49 |
Original motif |
Reverse complement motif |
Consensus sequence: CTGGCCTC |
Consensus sequence: GAGGCCAG |
|
|
|
|
Best Matches for Motif ID 49 (Highest to Lowest)
Motif ID: |
UP00527 |
Motif name: |
Foxn4_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
TCDAMVBGACGCMAKDDDVBBD
-------GAGGCCAG-------
Original motif |
Reverse complement motif |
Consensus sequence: DBBVDDDRTRGCGTCBBYTHGA |
Consensus sequence: TCDAMVBGACGCMAKDDDVBBD |
|
|
|
|
Motif ID: |
UP00079 |
Motif name: |
Esrra_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.00199504 |
Alignment:
DBBHHTGACCCCTBBYV
----CTGGCCTC-----
Original motif |
Reverse complement motif |
Consensus sequence: VKBBAGGGGTCAHDBBH |
Consensus sequence: DBBHHTGACCCCTBBYV |
|
|
|
|
Motif ID: |
UP00035 |
Motif name: |
Hic1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.0108368 |
Alignment:
DDBHGGTTGGCATVBD
------CTGGCCTC--
Original motif |
Reverse complement motif |
Consensus sequence: DBBATGCCAACCHVHH |
Consensus sequence: DDBHGGTTGGCATVBD |
|
|
|
|
Motif ID: |
UP00045 |
Motif name: |
Mafb_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0.0117596 |
Alignment:
DMTWDGTCAGCADWTTH
--GAGGCCAG-------
Original motif |
Reverse complement motif |
Consensus sequence: HAAWDTGCTGACDWARH |
Consensus sequence: DMTWDGTCAGCADWTTH |
|
|
|
|
Motif ID: |
UP00053 |
Motif name: |
Rxra_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.0118075 |
Alignment:
VHBHDGGGGTCAHBHBD
-----GAGGCCAG----
Original motif |
Reverse complement motif |
Consensus sequence: DBHBDTGACCCCDHVHB |
Consensus sequence: VHBHDGGGGTCAHBHBD |
|
|
|
|
Dataset #: 2 |
Motif ID: 50 |
Motif name: Motif 50 |
Original motif |
Reverse complement motif |
Consensus sequence: AGRAA |
Consensus sequence: TTMCT |
|
|
|
|
Best Matches for Motif ID 50 (Highest to Lowest)
Motif ID: |
UP00043 |
Motif name: |
Bcl6b_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
5 |
Similarity score: |
0 |
Alignment:
DCTTTCKAGGAATHHV
-------AGRAA----
Original motif |
Reverse complement motif |
Consensus sequence: DCTTTCKAGGAATHHV |
Consensus sequence: VHHATTCCTYGAAAGD |
|
|
|
|
Motif ID: |
UP00409 |
Motif name: |
Elf5 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
5 |
Similarity score: |
0.00150766 |
Alignment:
BWAHSMGGAAGTWD
-----AGRAA----
Original motif |
Reverse complement motif |
Consensus sequence: BWAHSMGGAAGTWD |
Consensus sequence: DWACTTCCRSDTWV |
|
|
|
|
Motif ID: |
UP00090 |
Motif name: |
Elf3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
5 |
Similarity score: |
0.00378425 |
Alignment:
TDAMTTCCYYDTD
----TTMCT----
Original motif |
Reverse complement motif |
Consensus sequence: DAHMMGGAARTDA |
Consensus sequence: TDAMTTCCYYDTD |
|
|
|
|
Motif ID: |
UP00181 |
Motif name: |
Barx1 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
10 |
Number of overlap: |
5 |
Similarity score: |
0.00386973 |
Alignment:
WTHHMSKAATTMVKHY
---------TTMCT--
Original motif |
Reverse complement motif |
Consensus sequence: MHRVYAATTRSYDHAW |
Consensus sequence: WTHHMSKAATTMVKHY |
|
|
|
|
Motif ID: |
UP00085 |
Motif name: |
Sfpi1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
5 |
Similarity score: |
0.00623266 |
Alignment:
BDAWGVGGAAGTDH
-----AGRAA----
Original motif |
Reverse complement motif |
Consensus sequence: BDAWGVGGAAGTDH |
Consensus sequence: HDACTTCCBCWTDV |
|
|
|
|
Dataset #: 2 |
Motif ID: 51 |
Motif name: Motif 51 |
Original motif |
Reverse complement motif |
Consensus sequence: GAGTTACA |
Consensus sequence: TGTAACTC |
|
|
|
|
Best Matches for Motif ID 51 (Highest to Lowest)
Motif ID: |
UP00103 |
Motif name: |
Jundm2_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
VDKDRTGASTCAYHDH
------GAGTTACA--
Original motif |
Reverse complement motif |
Consensus sequence: VDKDRTGASTCAYHDH |
Consensus sequence: HDDKTGASTCAKHRDB |
|
|
|
|
Motif ID: |
UP00193 |
Motif name: |
Rhox11_1765.2 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.00122205 |
Alignment:
AVDVCGCTGTWAWDVVW
-------TGTAACTC--
Original motif |
Reverse complement motif |
Consensus sequence: AVDVCGCTGTWAWDVVW |
Consensus sequence: WVVHWTWACAGCGBHBT |
|
|
|
|
Motif ID: |
UP00205 |
Motif name: |
Pknox2 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
2 |
Number of overlap: |
8 |
Similarity score: |
0.0014195 |
Alignment:
HAVSRSCTGTCAATHB
-------TGTAACTC-
Original motif |
Reverse complement motif |
Consensus sequence: HAVSRSCTGTCAATHB |
Consensus sequence: VHATTGACAGSKSVTH |
|
|
|
|
Motif ID: |
UP00236 |
Motif name: |
Irx2 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
8 |
Similarity score: |
0.00152046 |
Alignment:
WVWDDTACATGTADDDW
-GAGTTACA--------
Original motif |
Reverse complement motif |
Consensus sequence: WDDDTACATGTADDWBW |
Consensus sequence: WVWDDTACATGTADDDW |
|
|
|
|
Motif ID: |
UP00193 |
Motif name: |
Rhox11_2205.1 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.00217941 |
Alignment:
AVDHCGCTGTWAWDVVW
-------TGTAACTC--
Original motif |
Reverse complement motif |
Consensus sequence: AVDHCGCTGTWAWDVVW |
Consensus sequence: WVVHWTWACAGCGHHVT |
|
|
|
|
Dataset #: 2 |
Motif ID: 52 |
Motif name: Motif 52 |
Original motif |
Reverse complement motif |
Consensus sequence: AAATAAAW |
Consensus sequence: WTTTATTT |
|
|
|
|
Best Matches for Motif ID 52 (Highest to Lowest)
Motif ID: |
UP00133 |
Motif name: |
Cdx2 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
DVVGGYMATAAAAHKH
-----AAATAAAW---
Original motif |
Reverse complement motif |
Consensus sequence: DVVGGYMATAAAAHKH |
Consensus sequence: HRHTTTTATYMCCVBD |
|
|
|
|
Motif ID: |
UP00180 |
Motif name: |
Hoxd13 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.00105399 |
Alignment:
HDHYYAATAAAAHHHH
----AAATAAAW----
Original motif |
Reverse complement motif |
Consensus sequence: HDHYYAATAAAAHHHH |
Consensus sequence: HDHHTTTTATTKKHDD |
|
|
|
|
Motif ID: |
UP00134 |
Motif name: |
Hoxb13 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.00468315 |
Alignment:
VDHWTTTTATTGGDKB
----WTTTATTT----
Original motif |
Reverse complement motif |
Consensus sequence: VRHCCAATAAAAWHHV |
Consensus sequence: VDHWTTTTATTGGDKB |
|
|
|
|
Motif ID: |
UP00217 |
Motif name: |
Hoxa10 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.00632827 |
Alignment:
DHBGYAATAAAATDHW
----AAATAAAW----
Original motif |
Reverse complement motif |
Consensus sequence: DHBGYAATAAAATDHW |
Consensus sequence: WDDATTTTATTMCBHD |
|
|
|
|
Motif ID: |
UP00121 |
Motif name: |
Hoxd10 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.00650679 |
Alignment:
HDDDATTTTATTKVRDB
-----WTTTATTT----
Original motif |
Reverse complement motif |
Consensus sequence: VDKVYAATAAAATDDDH |
Consensus sequence: HDDDATTTTATTKVRDB |
|
|
|
|
Dataset #: 2 |
Motif ID: 53 |
Motif name: Motif 53 |
Original motif |
Reverse complement motif |
Consensus sequence: CAGATCCC |
Consensus sequence: GGGATCTG |
|
|
|
|
Best Matches for Motif ID 53 (Highest to Lowest)
Motif ID: |
UP00232 |
Motif name: |
Dobox4 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
HWHWTAGATACCCYWTD
----CAGATCCC-----
Original motif |
Reverse complement motif |
Consensus sequence: HWHWTAGATACCCYWTD |
Consensus sequence: DAWKGGGTATCTAWHWH |
|
|
|
|
Motif ID: |
UP00033 |
Motif name: |
Zfp410_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
7 |
Number of overlap: |
8 |
Similarity score: |
0.0114177 |
Alignment:
DVDDATGGGATGKMDDV
------GGGATCTG---
Original motif |
Reverse complement motif |
Consensus sequence: DVDDATGGGATGKMDDV |
Consensus sequence: BDDYYCATCCCATDDBD |
|
|
|
|
Motif ID: |
UP00019 |
Motif name: |
Zbtb12_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.0161888 |
Alignment:
BDHRBGTTCTAGATCVB
---GGGATCTG------
Original motif |
Reverse complement motif |
Consensus sequence: BDHRBGTTCTAGATCVB |
Consensus sequence: BBGATCTAGAACBKHDB |
|
|
|
|
Motif ID: |
UP00265 |
Motif name: |
Pitx3 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.0173992 |
Alignment:
VGGGGGATTAGCDDBC
---GGGATCTG-----
Original motif |
Reverse complement motif |
Consensus sequence: VGGGGGATTAGCDDBC |
Consensus sequence: GBHDGCTAATCCCCCB |
|
|
|
|
Motif ID: |
UP00024 |
Motif name: |
Glis2_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.0190616 |
Alignment:
HHHVGACCCCCCVBRD
--CAGATCCC------
Original motif |
Reverse complement motif |
Consensus sequence: HHHVGACCCCCCVBRD |
Consensus sequence: HKBBGGGGGGTCVHHH |
|
|
|
|
Dataset #: 2 |
Motif ID: 54 |
Motif name: Motif 54 |
Original motif |
Reverse complement motif |
Consensus sequence: ATTYY |
Consensus sequence: MKAAT |
|
|
|
|
Best Matches for Motif ID 54 (Highest to Lowest)
Motif ID: |
UP00253 |
Motif name: |
Rax |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
8 |
Number of overlap: |
5 |
Similarity score: |
0 |
Alignment:
DBSBKMTAATTAKBGSW
-----MKAAT-------
Original motif |
Reverse complement motif |
Consensus sequence: WSCVYTAATTARYBSVH |
Consensus sequence: DBSBKMTAATTAKBGSW |
|
|
|
|
Motif ID: |
UP00163 |
Motif name: |
En2 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
5 |
Similarity score: |
0.00258272 |
Alignment:
HHVBAMTAATTAKBDCW
-----MKAAT-------
Original motif |
Reverse complement motif |
Consensus sequence: WGHVYTAATTARTBVHH |
Consensus sequence: HHVBAMTAATTAKBDCW |
|
|
|
|
Motif ID: |
UP00178 |
Motif name: |
Og2x |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
5 |
Similarity score: |
0.00347324 |
Alignment:
BHDHBMKAATTMKVVCG
-----MKAAT-------
Original motif |
Reverse complement motif |
Consensus sequence: CGVVYYAATTRRBHDHB |
Consensus sequence: BHDHBMKAATTMKVVCG |
|
|
|
|
Motif ID: |
UP00108 |
Motif name: |
Alx3 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
8 |
Number of overlap: |
5 |
Similarity score: |
0.00511465 |
Alignment:
VHVAKMTAATTAKTHBW
-----MKAAT-------
Original motif |
Reverse complement motif |
Consensus sequence: WVHAYTAATTARYTVHV |
Consensus sequence: VHVAKMTAATTAKTHBW |
|
|
|
|
Motif ID: |
UP00139 |
Motif name: |
Nkx1-2 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
9 |
Number of overlap: |
5 |
Similarity score: |
0.0054602 |
Alignment:
WGHAMTAATTAKKVBDH
----MKAAT--------
Original motif |
Reverse complement motif |
Consensus sequence: DDBVRYTAATTARTDCW |
Consensus sequence: WGHAMTAATTAKKVBDH |
|
|
|
|
Dataset #: 2 |
Motif ID: 55 |
Motif name: Motif 55 |
Original motif |
Reverse complement motif |
Consensus sequence: GCTCACAA |
Consensus sequence: TTGTGAGC |
|
|
|
|
Best Matches for Motif ID 55 (Highest to Lowest)
Motif ID: |
UP00026 |
Motif name: |
Zscan4_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
HVHRGCACACAAHHHV
----GCTCACAA----
Original motif |
Reverse complement motif |
Consensus sequence: HVHRGCACACAAHHHV |
Consensus sequence: BHHHTTGTGTGCKHVD |
|
|
|
|
Motif ID: |
UP00042 |
Motif name: |
Gm397_second |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.0097578 |
Alignment:
DVMVGCACACACKCVH
----GCTCACAA----
Original motif |
Reverse complement motif |
Consensus sequence: DVMVGCACACACKCVH |
Consensus sequence: HBGYGTGTGTGCVRVD |
|
|
|
|
Motif ID: |
UP00095 |
Motif name: |
Zfp691_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
9 |
Number of overlap: |
8 |
Similarity score: |
0.0133529 |
Alignment:
DDHBYGAGCACTGBHHB
-TTGTGAGC--------
Original motif |
Reverse complement motif |
Consensus sequence: BDHVCAGTGCTCMBHDD |
Consensus sequence: DDHBYGAGCACTGBHHB |
|
|
|
|
Motif ID: |
UP00258 |
Motif name: |
Tgif2 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.0172769 |
Alignment:
VBWTTGACAGCTVBTT
---TTGTGAGC-----
Original motif |
Reverse complement motif |
Consensus sequence: AABBAGCTGTCAAWVV |
Consensus sequence: VBWTTGACAGCTVBTT |
|
|
|
|
Motif ID: |
UP00045 |
Motif name: |
Mafb_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
7 |
Number of overlap: |
8 |
Similarity score: |
0.0197606 |
Alignment:
DMTWDGTCAGCADWTTH
---TTGTGAGC------
Original motif |
Reverse complement motif |
Consensus sequence: HAAWDTGCTGACDWARH |
Consensus sequence: DMTWDGTCAGCADWTTH |
|
|
|
|
Dataset #: 2 |
Motif ID: 56 |
Motif name: Motif 56 |
Original motif |
Reverse complement motif |
Consensus sequence: CCACATGG |
Consensus sequence: CCATGTGG |
|
|
|
|
Best Matches for Motif ID 56 (Highest to Lowest)
Motif ID: |
UP00010 |
Motif name: |
Tcfap2b_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
HTGCCMTVKGGCMD
---CCATGTGG---
Original motif |
Reverse complement motif |
Consensus sequence: DYGCCYBARGGCAH |
Consensus sequence: HTGCCMTVKGGCMD |
|
|
|
|
Motif ID: |
UP00050 |
Motif name: |
Bhlhb2_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
9 |
Number of overlap: |
8 |
Similarity score: |
0.000569341 |
Alignment:
YDYBDHTMCACGTGGADDBMDGT
-------CCACATGG--------
Original motif |
Reverse complement motif |
Consensus sequence: YDYBDHTMCACGTGGADDBMDGT |
Consensus sequence: ACHRBHDTCCACGTGYAHHBMHM |
|
|
|
|
Motif ID: |
UP00060 |
Motif name: |
Max_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.0020225 |
Alignment:
DDASCACGTGBTBVDD
---CCACATGG-----
Original motif |
Reverse complement motif |
Consensus sequence: DDASCACGTGBTBVDD |
Consensus sequence: HHVBABCACGTGSTHD |
|
|
|
|
Motif ID: |
UP00046 |
Motif name: |
Tcfe2a_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.00356885 |
Alignment:
HVDDVCAGATGKYHBBV
----CCACATGG-----
Original motif |
Reverse complement motif |
Consensus sequence: HVDDVCAGATGKYHBBV |
Consensus sequence: VBBDMYCATCTGVHHBH |
|
|
|
|
Motif ID: |
UP00539 |
Motif name: |
Gli2_v015681_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
11 |
Number of overlap: |
8 |
Similarity score: |
0.00437787 |
Alignment:
HTBVVVDGGACCACCCRGRDBG
----------CCACATGG----
Original motif |
Reverse complement motif |
Consensus sequence: HTBVVVDGGACCACCCRGRDBG |
Consensus sequence: CBDMCMGGGTGGTCCHVBVBAH |
|
|
|
|
Dataset #: 2 |
Motif ID: 57 |
Motif name: Motif 57 |
Original motif |
Reverse complement motif |
Consensus sequence: ACACACAY |
Consensus sequence: KTGTGTGT |
|
|
|
|
Best Matches for Motif ID 57 (Highest to Lowest)
Motif ID: |
UP00042 |
Motif name: |
Gm397_second |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
HBGYGTGTGTGCVRVD
--KTGTGTGT------
Original motif |
Reverse complement motif |
Consensus sequence: DVMVGCACACACKCVH |
Consensus sequence: HBGYGTGTGTGCVRVD |
|
|
|
|
Motif ID: |
UP00026 |
Motif name: |
Zscan4_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.0175328 |
Alignment:
BHHHTTGTGTGCKHVD
------KTGTGTGT--
Original motif |
Reverse complement motif |
Consensus sequence: HVHRGCACACAAHHHV |
Consensus sequence: BHHHTTGTGTGCKHVD |
|
|
|
|
Motif ID: |
UP00041 |
Motif name: |
Foxj1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.0353784 |
Alignment:
HDHRTAAACAAAHDDD
-----ACACACAY---
Original motif |
Reverse complement motif |
Consensus sequence: HDHRTAAACAAAHDDD |
Consensus sequence: DDDHTTTGTTTAMHDH |
|
|
|
|
Motif ID: |
UP00026 |
Motif name: |
Zscan4_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.0359654 |
Alignment:
DHVDTGTGCACAYAHDH
-------ACACACAY--
Original motif |
Reverse complement motif |
Consensus sequence: DHVDTGTGCACAYAHDH |
Consensus sequence: HDHTMTGTGCACADVHD |
|
|
|
|
Motif ID: |
UP00039 |
Motif name: |
Foxj3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.0382549 |
Alignment:
DVVTTTGTTTACDTHDH
--KTGTGTGT-------
Original motif |
Reverse complement motif |
Consensus sequence: HDHADGTAAACAAAVVH |
Consensus sequence: DVVTTTGTTTACDTHDH |
|
|
|
|
Dataset #: 2 |
Motif ID: 58 |
Motif name: Motif 58 |
Original motif |
Reverse complement motif |
Consensus sequence: TACATGCA |
Consensus sequence: TGCATGTA |
|
|
|
|
Best Matches for Motif ID 58 (Highest to Lowest)
Motif ID: |
UP00150 |
Motif name: |
Irx6 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
AHWDBTACATGTADHTH
-----TACATGCA----
Original motif |
Reverse complement motif |
Consensus sequence: HAHDTACATGTAVDWHT |
Consensus sequence: AHWDBTACATGTADHTH |
|
|
|
|
Motif ID: |
UP00236 |
Motif name: |
Irx2 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.000109499 |
Alignment:
WVWDDTACATGTADDDW
-----TACATGCA----
Original motif |
Reverse complement motif |
Consensus sequence: WDDDTACATGTADDWBW |
Consensus sequence: WVWDDTACATGTADDDW |
|
|
|
|
Motif ID: |
UP00223 |
Motif name: |
Irx3_2226.1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.000755361 |
Alignment:
DHDWBTACATGTAHDDD
-----TACATGCA----
Original motif |
Reverse complement motif |
Consensus sequence: DDDHTACATGTAVWDHD |
Consensus sequence: DHDWBTACATGTAHDDD |
|
|
|
|
Motif ID: |
UP00223 |
Motif name: |
Irx3_0920.1 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.00254146 |
Alignment:
DDDDTACATGTAVWWHD
----TGCATGTA-----
Original motif |
Reverse complement motif |
Consensus sequence: DDDDTACATGTAVWWHD |
Consensus sequence: DDWWBTACATGTADDDD |
|
|
|
|
Motif ID: |
UP00250 |
Motif name: |
Irx5 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.0106901 |
Alignment:
WVTDHWACATGTWHDDD
-----TACATGCA----
Original motif |
Reverse complement motif |
Consensus sequence: DDDHWACATGTWHDABW |
Consensus sequence: WVTDHWACATGTWHDDD |
|
|
|
|
Dataset #: 2 |
Motif ID: 59 |
Motif name: Motif 59 |
Original motif |
Reverse complement motif |
Consensus sequence: CCCCRCCC |
Consensus sequence: GGGKGGGG |
|
|
|
|
Best Matches for Motif ID 59 (Highest to Lowest)
Motif ID: |
UP00093 |
Motif name: |
Klf7_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
HBDRCCMCGCCCHHHD
----CCCCRCCC----
Original motif |
Reverse complement motif |
Consensus sequence: HBDRCCMCGCCCHHHD |
Consensus sequence: DHHDGGGCGRGGKHBH |
|
|
|
|
Motif ID: |
UP00021 |
Motif name: |
Zfp281_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.0189858 |
Alignment:
GKRGGGGGGGGGGBD
-----GGGKGGGG--
Original motif |
Reverse complement motif |
Consensus sequence: DBCCCCCCCCCCMYC |
Consensus sequence: GKRGGGGGGGGGGBD |
|
|
|
|
Motif ID: |
UP00022 |
Motif name: |
Zfp740_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.0254924 |
Alignment:
BHHDYGGGGGGGGBVD
-----GGGKGGGG---
Original motif |
Reverse complement motif |
Consensus sequence: HVBCCCCCCCCMHHHB |
Consensus sequence: BHHDYGGGGGGGGBVD |
|
|
|
|
Motif ID: |
UP00538 |
Motif name: |
Gli1_v015681_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0.0331118 |
Alignment:
MHHHWHYTMCCHCCCACVAABVH
-------CCCCRCCC--------
Original motif |
Reverse complement motif |
Consensus sequence: MHHHWHYTMCCHCCCACVAABVH |
Consensus sequence: DVVTTVGTGGGHGGYAMHWHHHY |
|
|
|
|
Motif ID: |
UP00007 |
Motif name: |
Egr1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.0351247 |
Alignment:
VHTGCGGGGGCGGH
-----GGGKGGGG-
Original motif |
Reverse complement motif |
Consensus sequence: HCCGCCCCCGCAHB |
Consensus sequence: VHTGCGGGGGCGGH |
|
|
|
|
Dataset #: 2 |
Motif ID: 60 |
Motif name: Motif 60 |
Original motif |
Reverse complement motif |
Consensus sequence: CTGGAR |
Consensus sequence: MTCCAG |
|
|
|
|
Best Matches for Motif ID 60 (Highest to Lowest)
Motif ID: |
UP00031 |
Motif name: |
Zbtb3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
6 |
Similarity score: |
0 |
Alignment:
BBBAVTGCAGTGBBVDD
----MTCCAG-------
Original motif |
Reverse complement motif |
Consensus sequence: DDBBBCACTGCABTBBB |
Consensus sequence: BBBAVTGCAGTGBBVDD |
|
|
|
|
Motif ID: |
UP00000 |
Motif name: |
Smad3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
6 |
Similarity score: |
0.00563465 |
Alignment:
HDHDDCCAGACABBHVH
---MTCCAG--------
Original motif |
Reverse complement motif |
Consensus sequence: HDHDDCCAGACABBHVH |
Consensus sequence: HVHBVTGTCTGGDDHDD |
|
|
|
|
Motif ID: |
UP00416 |
Motif name: |
Fli1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
7 |
Number of overlap: |
6 |
Similarity score: |
0.00856965 |
Alignment:
DHDACCGGAAKTBBVV
----CTGGAR------
Original motif |
Reverse complement motif |
Consensus sequence: VBBVAYTTCCGGTDDH |
Consensus sequence: DHDACCGGAAKTBBVV |
|
|
|
|
Motif ID: |
UP00411 |
Motif name: |
Erg |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
7 |
Number of overlap: |
6 |
Similarity score: |
0.00868366 |
Alignment:
BDDACCGGAAKTVBVB
----CTGGAR------
Original motif |
Reverse complement motif |
Consensus sequence: VBBVAYTTCCGGTDDB |
Consensus sequence: BDDACCGGAAKTVBVB |
|
|
|
|
Motif ID: |
UP00231 |
Motif name: |
Nkx2-2 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
6 |
Similarity score: |
0.0091158 |
Alignment:
HDVRCCACTTGARADBD
-------CTGGAR----
Original motif |
Reverse complement motif |
Consensus sequence: HDVRCCACTTGARADBD |
Consensus sequence: DVDTKTCAAGTGGKBDH |
|
|
|
|
Dataset #: 2 |
Motif ID: 61 |
Motif name: Motif 61 |
Original motif |
Reverse complement motif |
Consensus sequence: AGATGGY |
Consensus sequence: KCCATCT |
|
|
|
|
Best Matches for Motif ID 61 (Highest to Lowest)
Motif ID: |
UP00046 |
Motif name: |
Tcfe2a_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
7 |
Number of overlap: |
7 |
Similarity score: |
0 |
Alignment:
HVDDVCAGATGKYHBBV
------AGATGGY----
Original motif |
Reverse complement motif |
Consensus sequence: HVDDVCAGATGKYHBBV |
Consensus sequence: VBBDMYCATCTGVHHBH |
|
|
|
|
Motif ID: |
UP00036 |
Motif name: |
Myf6_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
3 |
Number of overlap: |
7 |
Similarity score: |
0.0380154 |
Alignment:
BDKVCABCTGTTBDBV
--KCCATCT-------
Original motif |
Reverse complement motif |
Consensus sequence: VVDBAACAGBTGBYHB |
Consensus sequence: BDKVCABCTGTTBDBV |
|
|
|
|
Motif ID: |
UP00081 |
Motif name: |
Mybl1_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
7 |
Number of overlap: |
7 |
Similarity score: |
0.0385991 |
Alignment:
BHCGGCAGTTGGBBB
------AGATGGY--
Original motif |
Reverse complement motif |
Consensus sequence: BBVCCAACTGCCGHB |
Consensus sequence: BHCGGCAGTTGGBBB |
|
|
|
|
Motif ID: |
UP00033 |
Motif name: |
Zfp410_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
7 |
Similarity score: |
0.0422018 |
Alignment:
BDDYYCATCCCATDDBD
---KCCATCT-------
Original motif |
Reverse complement motif |
Consensus sequence: DVDDATGGGATGKMDDV |
Consensus sequence: BDDYYCATCCCATDDBD |
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Motif ID: |
UP00092 |
Motif name: |
Myb_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
7 |
Similarity score: |
0.0463999 |
Alignment:
DBVKGGCAGTTGGTHB
-------AGATGGY--
Original motif |
Reverse complement motif |
Consensus sequence: BDACCAACTGCCRBBH |
Consensus sequence: DBVKGGCAGTTGGTHB |
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Dataset #: 2 |
Motif ID: 62 |
Motif name: Motif 62 |
Original motif |
Reverse complement motif |
Consensus sequence: CGCCVCC |
Consensus sequence: GGVGGCG |
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Best Matches for Motif ID 62 (Highest to Lowest)
Motif ID: |
UP00002 |
Motif name: |
Sp4_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0 |
Alignment:
BVVHAGGGGGCGRDHHB
-----GGVGGCG-----
Original motif |
Reverse complement motif |
Consensus sequence: BDHHMCGCCCCCTHVBB |
Consensus sequence: BVVHAGGGGGCGRDHHB |
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Motif ID: |
UP00007 |
Motif name: |
Egr1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
3 |
Number of overlap: |
7 |
Similarity score: |
0.0105671 |
Alignment:
HCCGCCCCCGCAHB
--CGCCVCC-----
Original motif |
Reverse complement motif |
Consensus sequence: HCCGCCCCCGCAHB |
Consensus sequence: VHTGCGGGGGCGGH |
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Motif ID: |
UP00093 |
Motif name: |
Klf7_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0.0302678 |
Alignment:
DHHDGGGCGRGGKHBH
-----GGVGGCG----
Original motif |
Reverse complement motif |
Consensus sequence: HBDRCCMCGCCCHHHD |
Consensus sequence: DHHDGGGCGRGGKHBH |
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Motif ID: |
UP00400 |
Motif name: |
Zif268 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
10 |
Number of overlap: |
7 |
Similarity score: |
0.0347726 |
Alignment:
BADHBDHCGCCCMCGCAHHDBBV
-------CGCCVCC---------
Original motif |
Reverse complement motif |
Consensus sequence: BADHBDHCGCCCMCGCAHHDBBV |
Consensus sequence: VVVDHHTGCGYGGGCGDHVHHTB |
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Motif ID: |
UP00000 |
Motif name: |
Smad3_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
7 |
Similarity score: |
0.0384581 |
Alignment:
DHHBCCCCGCCAHHBHB
-------CGCCVCC---
Original motif |
Reverse complement motif |
Consensus sequence: DHHBCCCCGCCAHHBHB |
Consensus sequence: BHBHDTGGCGGGGBDHD |
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Dataset #: 2 |
Motif ID: 63 |
Motif name: Motif 63 |
Original motif |
Reverse complement motif |
Consensus sequence: AGAGGGWG |
Consensus sequence: CWCCCTCT |
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Best Matches for Motif ID 63 (Highest to Lowest)
Motif ID: |
UP00002 |
Motif name: |
Sp4_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
BVVHAGGGGGCGRDHHB
----AGAGGGWG-----
Original motif |
Reverse complement motif |
Consensus sequence: BDHHMCGCCCCCTHVBB |
Consensus sequence: BVVHAGGGGGCGRDHHB |
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Motif ID: |
UP00538 |
Motif name: |
Gli1_v015681_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
11 |
Number of overlap: |
8 |
Similarity score: |
0.00709886 |
Alignment:
DVVTTVGTGGGHGGYAMHWHHHY
-----AGAGGGWG----------
Original motif |
Reverse complement motif |
Consensus sequence: MHHHWHYTMCCHCCCACVAABVH |
Consensus sequence: DVVTTVGTGGGHGGYAMHWHHHY |
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Motif ID: |
UP00540 |
Motif name: |
Gli3_v015681_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
12 |
Number of overlap: |
8 |
Similarity score: |
0.0107485 |
Alignment:
YBVDMGTGGGTGGTCKVVBVBBT
----AGAGGGWG-----------
Original motif |
Reverse complement motif |
Consensus sequence: ABBBBVVRGACCACCCACRDBBM |
Consensus sequence: YBVDMGTGGGTGGTCKVVBVBBT |
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Motif ID: |
UP00007 |
Motif name: |
Egr1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.0126141 |
Alignment:
VHTGCGGGGGCGGH
----AGAGGGWG--
Original motif |
Reverse complement motif |
Consensus sequence: HCCGCCCCCGCAHB |
Consensus sequence: VHTGCGGGGGCGGH |
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Motif ID: |
UP00021 |
Motif name: |
Zfp281_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.0180504 |
Alignment:
GKRGGGGGGGGGGBD
--AGAGGGWG-----
Original motif |
Reverse complement motif |
Consensus sequence: DBCCCCCCCCCCMYC |
Consensus sequence: GKRGGGGGGGGGGBD |
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Dataset #: 2 |
Motif ID: 64 |
Motif name: Motif 64 |
Original motif |
Reverse complement motif |
Consensus sequence: CATATRCA |
Consensus sequence: TGMATATG |
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Best Matches for Motif ID 64 (Highest to Lowest)
Motif ID: |
UP00211 |
Motif name: |
Pou3f3 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
HADDTATGCATAATDDA
------TGMATATG---
Original motif |
Reverse complement motif |
Consensus sequence: HADDTATGCATAATDDA |
Consensus sequence: TDDATTATGCATADDTH |
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Motif ID: |
UP00179 |
Motif name: |
Pou2f3 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.00980027 |
Alignment:
BHDTATGCAAATBHDV
-----TGMATATG---
Original motif |
Reverse complement motif |
Consensus sequence: BHDTATGCAAATBHDV |
Consensus sequence: BHHVATTTGCATAHHV |
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Motif ID: |
UP00191 |
Motif name: |
Pou2f2 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.011527 |
Alignment:
BHDTATGCAAATDHDV
-----TGMATATG---
Original motif |
Reverse complement motif |
Consensus sequence: BHDTATGCAAATDHDV |
Consensus sequence: BHHDATTTGCATAHHV |
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Motif ID: |
UP00097 |
Motif name: |
Mtf1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.0243027 |
Alignment:
HDYTTGCACACGDHBH
----TGMATATG----
Original motif |
Reverse complement motif |
Consensus sequence: DBDHCGTGTGCAAMDH |
Consensus sequence: HDYTTGCACACGDHBH |
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Motif ID: |
UP00042 |
Motif name: |
Gm397_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.0250687 |
Alignment:
HHRTATGTGCACATHHD
---CATATRCA------
Original motif |
Reverse complement motif |
Consensus sequence: HHDATGTGCACATAMDH |
Consensus sequence: HHRTATGTGCACATHHD |
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Dataset #: 2 |
Motif ID: 65 |
Motif name: Motif 65 |
Original motif |
Reverse complement motif |
Consensus sequence: ARAACA |
Consensus sequence: TGTTMT |
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Best Matches for Motif ID 65 (Highest to Lowest)
Motif ID: |
UP00101 |
Motif name: |
Sox12_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
6 |
Similarity score: |
0 |
Alignment:
DWTHAVAACAATHA
----ARAACA----
Original motif |
Reverse complement motif |
Consensus sequence: THATTGTTVTHAWH |
Consensus sequence: DWTHAVAACAATHA |
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Motif ID: |
UP00030 |
Motif name: |
Sox11_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
6 |
Similarity score: |
0.000395587 |
Alignment:
HBDDRAACAAAGRABHH
---ARAACA--------
Original motif |
Reverse complement motif |
Consensus sequence: HBDDRAACAAAGRABHH |
Consensus sequence: HHBTMCTTTGTTMDDVH |
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Motif ID: |
UP00062 |
Motif name: |
Sox4_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
6 |
Similarity score: |
0.00357565 |
Alignment:
HHBBMCTTTGTTHDDBH
--------TGTTMT---
Original motif |
Reverse complement motif |
Consensus sequence: HBDDDAACAAAGRVBHH |
Consensus sequence: HHBBMCTTTGTTHDDBH |
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Motif ID: |
UP00034 |
Motif name: |
Sox7_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
6 |
Similarity score: |
0.00753019 |
Alignment:
HHBDHDDAACAATDRHHHHHBW
-----ARAACA-----------
Original motif |
Reverse complement motif |
Consensus sequence: HHBDHDDAACAATDRHHHHHBW |
Consensus sequence: WBHHHHHMDATTGTTHDHDVHH |
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Motif ID: |
UP00039 |
Motif name: |
Foxj3_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
7 |
Number of overlap: |
6 |
Similarity score: |
0.0083324 |
Alignment:
DVHWDTGTTWTGDTBDH
-----TGTTMT------
Original motif |
Reverse complement motif |
Consensus sequence: HDBAHCAWAACADWDVD |
Consensus sequence: DVHWDTGTTWTGDTBDH |
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Dataset #: 2 |
Motif ID: 66 |
Motif name: Motif 66 |
Original motif |
Reverse complement motif |
Consensus sequence: TATAAATR |
Consensus sequence: KATTTATA |
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Best Matches for Motif ID 66 (Highest to Lowest)
Motif ID: |
UP00118 |
Motif name: |
Pou4f3 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
HVTTATTAATKADKHC
---TATAAATR-----
Original motif |
Reverse complement motif |
Consensus sequence: HVTTATTAATKADKHC |
Consensus sequence: GHYHTYATTAATAAVH |
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Motif ID: |
UP00061 |
Motif name: |
Foxl1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.00672344 |
Alignment:
DWAATRTAAACAAWVVB
----TATAAATR-----
Original motif |
Reverse complement motif |
Consensus sequence: DWAATRTAAACAAWVVB |
Consensus sequence: VVVWTTGTTTAMATTWD |
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Motif ID: |
UP00154 |
Motif name: |
Dlx3 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.00785197 |
Alignment:
BHVVDATAATTACMVHH
----TATAAATR-----
Original motif |
Reverse complement motif |
Consensus sequence: BHVVDATAATTACMVHH |
Consensus sequence: DHVRGTAATTATHVVDV |
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Motif ID: |
UP00016 |
Motif name: |
Sry_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
7 |
Number of overlap: |
8 |
Similarity score: |
0.00840021 |
Alignment:
VDDDATTATAATHDHV
------TATAAATR--
Original motif |
Reverse complement motif |
Consensus sequence: BHDHATTATAATDDDV |
Consensus sequence: VDDDATTATAATHDHV |
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Motif ID: |
UP00110 |
Motif name: |
Dlx4 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.011539 |
Alignment:
GHVRGTAATTATDVVGV
-----KATTTATA----
Original motif |
Reverse complement motif |
Consensus sequence: BCVVDATAATTACMVHC |
Consensus sequence: GHVRGTAATTATDVVGV |
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Dataset #: 2 |
Motif ID: 67 |
Motif name: Motif 67 |
Original motif |
Reverse complement motif |
Consensus sequence: SYGCCCYCTDSTGG |
Consensus sequence: CCASHAGKGGGCKS |
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Best Matches for Motif ID 67 (Highest to Lowest)
Motif ID: |
UP00022 |
Motif name: |
Zfp740_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
1 |
Number of overlap: |
14 |
Similarity score: |
0.036534 |
Alignment:
BHHDYGGGGGGGGBVD
CCASHAGKGGGCKS--
Original motif |
Reverse complement motif |
Consensus sequence: HVBCCCCCCCCMHHHB |
Consensus sequence: BHHDYGGGGGGGGBVD |
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Motif ID: |
UP00539 |
Motif name: |
Gli2_v016060_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
14 |
Similarity score: |
0.0371579 |
Alignment:
RTHBSYCGCCMCMYVCGBTVDH
-----SYGCCCYCTDSTGG---
Original motif |
Reverse complement motif |
Consensus sequence: RTHBSYCGCCMCMYVCGBTVDH |
Consensus sequence: HDBABCGBKRGYGGCGMSBHAK |
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Motif ID: |
UP00400 |
Motif name: |
Zif268 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
14 |
Similarity score: |
0.0410702 |
Alignment:
VVVDHHTGCGYGGGCGDHVHHTB
---CCASHAGKGGGCKS------
Original motif |
Reverse complement motif |
Consensus sequence: BADHBDHCGCCCMCGCAHHDBBV |
Consensus sequence: VVVDHHTGCGYGGGCGDHVHHTB |
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Motif ID: |
UP00022 |
Motif name: |
Zfp740_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
2 |
Number of overlap: |
14 |
Similarity score: |
0.0411664 |
Alignment:
DDDTWCCCCCCGGDRVH
--SYGCCCYCTDSTGG-
Original motif |
Reverse complement motif |
Consensus sequence: DDDTWCCCCCCGGDRVH |
Consensus sequence: HVKDCCGGGGGGWADDD |
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Motif ID: |
UP00007 |
Motif name: |
Egr1_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
14 |
Similarity score: |
0.0419746 |
Alignment:
BBHBGAGTGGGAHHDB
CCASHAGKGGGCKS--
Original motif |
Reverse complement motif |
Consensus sequence: BBHBGAGTGGGAHHDB |
Consensus sequence: BHHDTCCCACTCBDBV |
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Dataset #: 2 |
Motif ID: 68 |
Motif name: Motif 68 |
Original motif |
Reverse complement motif |
Consensus sequence: WAAWAAAWAWWWAA |
Consensus sequence: TTWWWTWTTTWTTW |
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Best Matches for Motif ID 68 (Highest to Lowest)
Motif ID: |
UP00073 |
Motif name: |
Foxa2_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
14 |
Similarity score: |
0.0252297 |
Alignment:
HHWAWGTAAAYAAAVDB
---WAAWAAAWAWWWAA
Original motif |
Reverse complement motif |
Consensus sequence: HHWAWGTAAAYAAAVDB |
Consensus sequence: BDVTTTKTTTACWTWHH |
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Motif ID: |
UP00061 |
Motif name: |
Foxl1_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
1 |
Number of overlap: |
14 |
Similarity score: |
0.0252358 |
Alignment:
HDTYTTGTTWTKDDDT
TTWWWTWTTTWTTW--
Original motif |
Reverse complement motif |
Consensus sequence: ADDDYAWAACAAMAHH |
Consensus sequence: HDTYTTGTTWTKDDDT |
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Motif ID: |
UP00039 |
Motif name: |
Foxj3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
14 |
Similarity score: |
0.0267996 |
Alignment:
HDHADGTAAACAAAVVH
---WAAWAAAWAWWWAA
Original motif |
Reverse complement motif |
Consensus sequence: HDHADGTAAACAAAVVH |
Consensus sequence: DVVTTTGTTTACDTHDH |
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Motif ID: |
UP00244 |
Motif name: |
Tlx2 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
2 |
Number of overlap: |
14 |
Similarity score: |
0.0275942 |
Alignment:
WWDTTATTAATTHATTV
--TTWWWTWTTTWTTW-
Original motif |
Reverse complement motif |
Consensus sequence: BAATHAATTAATAAHWW |
Consensus sequence: WWDTTATTAATTHATTV |
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Motif ID: |
UP00041 |
Motif name: |
Foxj1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
2 |
Number of overlap: |
14 |
Similarity score: |
0.0288501 |
Alignment:
HDHRTAAACAAAHDDD
-WAAWAAAWAWWWAA-
Original motif |
Reverse complement motif |
Consensus sequence: HDHRTAAACAAAHDDD |
Consensus sequence: DDDHTTTGTTTAMHDH |
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Dataset #: 2 |
Motif ID: 69 |
Motif name: Motif 69 |
Original motif |
Reverse complement motif |
Consensus sequence: CCTGGARCTGGAGT |
Consensus sequence: ACTCCAGMTCCAGG |
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Best Matches for Motif ID 69 (Highest to Lowest)
Motif ID: |
UP00007 |
Motif name: |
Egr1_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
1 |
Number of overlap: |
14 |
Similarity score: |
0.0303891 |
Alignment:
BHHDTCCCACTCBDBV
--ACTCCAGMTCCAGG
Original motif |
Reverse complement motif |
Consensus sequence: BBHBGAGTGGGAHHDB |
Consensus sequence: BHHDTCCCACTCBDBV |
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Motif ID: |
UP00079 |
Motif name: |
Esrra_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
14 |
Similarity score: |
0.031849 |
Alignment:
DHDBCAAGGTCAHVBDH
-ACTCCAGMTCCAGG--
Original motif |
Reverse complement motif |
Consensus sequence: DHDBCAAGGTCAHVBDH |
Consensus sequence: HHBVHTGACCTTGVDHD |
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|
Motif ID: |
UP00527 |
Motif name: |
Foxn4_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
1 |
Number of overlap: |
14 |
Similarity score: |
0.0328055 |
Alignment:
TCDAMVBGACGCMAKDDDVBBD
--------ACTCCAGMTCCAGG
Original motif |
Reverse complement motif |
Consensus sequence: DBBVDDDRTRGCGTCBBYTHGA |
Consensus sequence: TCDAMVBGACGCMAKDDDVBBD |
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|
Motif ID: |
UP00000 |
Motif name: |
Smad3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
14 |
Similarity score: |
0.0343241 |
Alignment:
HVHBVTGTCTGGDDHDD
-CCTGGARCTGGAGT--
Original motif |
Reverse complement motif |
Consensus sequence: HDHDDCCAGACABBHVH |
Consensus sequence: HVHBVTGTCTGGDDHDD |
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Motif ID: |
UP00076 |
Motif name: |
Rfxdc2_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
14 |
Similarity score: |
0.0347793 |
Alignment:
HDDVSGTRTCMADGBVB
ACTCCAGMTCCAGG---
Original motif |
Reverse complement motif |
Consensus sequence: BBVCDTRGAKACSVDDH |
Consensus sequence: HDDVSGTRTCMADGBVB |
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Dataset #: 3 |
Motif ID: 70 |
Motif name: Ar |
Original motif |
Reverse complement motif |
Consensus sequence: HWDAGHACRHHVTGTHCCHVMV |
Consensus sequence: VRVDGGHACAVDDKGTHCTDWH |
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Best Matches for Motif ID 70 (Highest to Lowest)
Motif ID: |
UP00032 |
Motif name: |
Gata3_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
1 |
Number of overlap: |
22 |
Similarity score: |
0.0676991 |
Alignment:
HBHDVBWGATHBTATCRVBHHH
HWDAGHACRHHVTGTHCCHVMV
Original motif |
Reverse complement motif |
Consensus sequence: HBHDVBWGATHBTATCRVBHHH |
Consensus sequence: HHHBBMGATAVHATCWVVDHVH |
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|
|
Motif ID: |
UP00034 |
Motif name: |
Sox7_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
1 |
Number of overlap: |
22 |
Similarity score: |
0.0692146 |
Alignment:
VVYDDDCHCAVACAATTDBVAC
VRVDGGHACAVDDKGTHCTDWH
Original motif |
Reverse complement motif |
Consensus sequence: GTVBDAATTGTVTGHGDDHKVB |
Consensus sequence: VVYDDDCHCAVACAATTDBVAC |
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|
|
Motif ID: |
UP00050 |
Motif name: |
Bhlhb2_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
1 |
Number of overlap: |
22 |
Similarity score: |
0.0695612 |
Alignment:
DDHBHBSTCACGTGAHBBDHHM
VRVDGGHACAVDDKGTHCTDWH
Original motif |
Reverse complement motif |
Consensus sequence: RDHDBVDTCACGTGASBHVHDH |
Consensus sequence: DDHBHBSTCACGTGAHBBDHHM |
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|
|
Motif ID: |
UP00050 |
Motif name: |
Bhlhb2_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
22 |
Similarity score: |
0.0771346 |
Alignment:
ACHRBHDTCCACGTGYAHHBMHM
-HWDAGHACRHHVTGTHCCHVMV
Original motif |
Reverse complement motif |
Consensus sequence: YDYBDHTMCACGTGGADDBMDGT |
Consensus sequence: ACHRBHDTCCACGTGYAHHBMHM |
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|
Motif ID: |
UP00526 |
Motif name: |
Foxn1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
1 |
Number of overlap: |
22 |
Similarity score: |
0.0772045 |
Alignment:
HDWHMHGACGCGCGTRBVVBHW
VRVDGGHACAVDDKGTHCTDWH
Original motif |
Reverse complement motif |
Consensus sequence: WHVBVVMACGCGCGTCDYHWDH |
Consensus sequence: HDWHMHGACGCGCGTRBVVBHW |
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Dataset #: 3 |
Motif ID: 71 |
Motif name: Arnt |
Original motif |
Reverse complement motif |
Consensus sequence: CACGTG |
Consensus sequence: CACGTG |
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Best Matches for Motif ID 71 (Highest to Lowest)
Motif ID: |
UP00050 |
Motif name: |
Bhlhb2_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
9 |
Number of overlap: |
6 |
Similarity score: |
0 |
Alignment:
RDHDBVDTCACGTGASBHVHDH
--------CACGTG--------
Original motif |
Reverse complement motif |
Consensus sequence: RDHDBVDTCACGTGASBHVHDH |
Consensus sequence: DDHBHBSTCACGTGAHBBDHHM |
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|
|
Motif ID: |
UP00050 |
Motif name: |
Bhlhb2_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
9 |
Number of overlap: |
6 |
Similarity score: |
0.0026425 |
Alignment:
YDYBDHTMCACGTGGADDBMDGT
--------CACGTG---------
Original motif |
Reverse complement motif |
Consensus sequence: YDYBDHTMCACGTGGADDBMDGT |
Consensus sequence: ACHRBHDTCCACGTGYAHHBMHM |
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|
Motif ID: |
UP00060 |
Motif name: |
Max_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
6 |
Similarity score: |
0.0044422 |
Alignment:
HHVBABCACGTGSTHD
------CACGTG----
Original motif |
Reverse complement motif |
Consensus sequence: DDASCACGTGBTBVDD |
Consensus sequence: HHVBABCACGTGSTHD |
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Motif ID: |
UP00046 |
Motif name: |
Tcfe2a_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
7 |
Number of overlap: |
6 |
Similarity score: |
0.0342153 |
Alignment:
DHDBHGCACCTGBDDVB
------CACGTG-----
Original motif |
Reverse complement motif |
Consensus sequence: VBHHVCAGGTGCDVDHD |
Consensus sequence: DHDBHGCACCTGBDDVB |
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Motif ID: |
UP00097 |
Motif name: |
Mtf1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
9 |
Number of overlap: |
6 |
Similarity score: |
0.0471928 |
Alignment:
HDYTTGCACACGDHBH
--------CACGTG--
Original motif |
Reverse complement motif |
Consensus sequence: DBDHCGTGTGCAAMDH |
Consensus sequence: HDYTTGCACACGDHBH |
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Dataset #: 3 |
Motif ID: 72 |
Motif name: ArntAhr |
Original motif |
Reverse complement motif |
Consensus sequence: YGCGTG |
Consensus sequence: CACGCM |
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Best Matches for Motif ID 72 (Highest to Lowest)
Motif ID: |
UP00400 |
Motif name: |
Zif268 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
7 |
Number of overlap: |
6 |
Similarity score: |
0 |
Alignment:
VVVDHHTGCGYGGGCGDHVHHTB
------YGCGTG-----------
Original motif |
Reverse complement motif |
Consensus sequence: BADHBDHCGCCCMCGCAHHDBBV |
Consensus sequence: VVVDHHTGCGYGGGCGDHVHHTB |
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Motif ID: |
UP00002 |
Motif name: |
Sp4_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
6 |
Similarity score: |
0.00183587 |
Alignment:
HHDGBCACGCCTWDB
-----CACGCM----
Original motif |
Reverse complement motif |
Consensus sequence: BDWAGGCGTGBCHHD |
Consensus sequence: HHDGBCACGCCTWDB |
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|
Motif ID: |
UP00060 |
Motif name: |
Max_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
6 |
Similarity score: |
0.00348048 |
Alignment:
HDGTCGCGTGDCVB
----YGCGTG----
Original motif |
Reverse complement motif |
Consensus sequence: BBGHCACGCGACDD |
Consensus sequence: HDGTCGCGTGDCVB |
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|
Motif ID: |
UP00527 |
Motif name: |
Foxn4_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
6 |
Similarity score: |
0.00526158 |
Alignment:
TCDAMVBGACGCMAKDDDVBBD
-------CACGCM---------
Original motif |
Reverse complement motif |
Consensus sequence: DBBVDDDRTRGCGTCBBYTHGA |
Consensus sequence: TCDAMVBGACGCMAKDDDVBBD |
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Motif ID: |
UP00042 |
Motif name: |
Gm397_second |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
8 |
Number of overlap: |
6 |
Similarity score: |
0.00558171 |
Alignment:
HBGYGTGTGTGCVRVD
---YGCGTG-------
Original motif |
Reverse complement motif |
Consensus sequence: DVMVGCACACACKCVH |
Consensus sequence: HBGYGTGTGTGCVRVD |
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Dataset #: 3 |
Motif ID: 73 |
Motif name: CREB1 |
Original motif |
Reverse complement motif |
Consensus sequence: TGACGTCA |
Consensus sequence: TGACGTCA |
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Best Matches for Motif ID 73 (Highest to Lowest)
Motif ID: |
UP00103 |
Motif name: |
Jundm2_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
BBGATGACGTCAYCVH
----TGACGTCA----
Original motif |
Reverse complement motif |
Consensus sequence: BBGATGACGTCAYCVH |
Consensus sequence: HVGMTGACGTCATCBB |
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|
Motif ID: |
UP00020 |
Motif name: |
Atf1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
2.53244e-05 |
Alignment:
DBDRTGACGTCAYHRD
----TGACGTCA----
Original motif |
Reverse complement motif |
Consensus sequence: DBDRTGACGTCAYHRD |
Consensus sequence: DMDMTGACGTCAKHBD |
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|
|
Motif ID: |
UP00527 |
Motif name: |
Foxn4_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
9 |
Number of overlap: |
8 |
Similarity score: |
0.029362 |
Alignment:
TCDAMVBGACGCMAKDDDVBBD
------TGACGTCA--------
Original motif |
Reverse complement motif |
Consensus sequence: DBBVDDDRTRGCGTCBBYTHGA |
Consensus sequence: TCDAMVBGACGCMAKDDDVBBD |
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|
Motif ID: |
UP00020 |
Motif name: |
Atf1_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.0350871 |
Alignment:
DDTMDTCGTCATDV
---TGACGTCA---
Original motif |
Reverse complement motif |
Consensus sequence: VDATGACGADYADH |
Consensus sequence: DDTMDTCGTCATDV |
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Motif ID: |
UP00084 |
Motif name: |
Gmeb1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.0378098 |
Alignment:
BHBBKKACGTMMVDBVB
----TGACGTCA-----
Original motif |
Reverse complement motif |
Consensus sequence: BHBBKKACGTMMVDBVB |
Consensus sequence: BVVDVRYACGTRYVBHB |
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Dataset #: 3 |
Motif ID: 74 |
Motif name: CTCF |
Original motif |
Reverse complement motif |
Consensus sequence: YDRCCASYAGRKGGCRSYV |
Consensus sequence: BMSMGCCYMCTKSTGGMHM |
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Best Matches for Motif ID 74 (Highest to Lowest)
Motif ID: |
UP00400 |
Motif name: |
Zif268 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
1 |
Number of overlap: |
19 |
Similarity score: |
0.0409369 |
Alignment:
VVVDHHTGCGYGGGCGDHVHHTB
----BMSMGCCYMCTKSTGGMHM
Original motif |
Reverse complement motif |
Consensus sequence: BADHBDHCGCCCMCGCAHHDBBV |
Consensus sequence: VVVDHHTGCGYGGGCGDHVHHTB |
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|
Motif ID: |
UP00538 |
Motif name: |
Gli1_v016060_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
19 |
Similarity score: |
0.0409815 |
Alignment:
HVBDAGCGBGGGTGGCRDBDDDB
-YDRCCASYAGRKGGCRSYV---
Original motif |
Reverse complement motif |
Consensus sequence: HVBDAGCGBGGGTGGCRDBDDDB |
Consensus sequence: BDDHVDKGCCACCCVCGCTDBVH |
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|
Motif ID: |
UP00540 |
Motif name: |
Gli3_v015681_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
1 |
Number of overlap: |
19 |
Similarity score: |
0.0431951 |
Alignment:
VMYDHDGMCCHCCKBGVVAAVH
---BMSMGCCYMCTKSTGGMHM
Original motif |
Reverse complement motif |
Consensus sequence: DVTTVVCVYGGHGGYCHHDMYB |
Consensus sequence: VMYDHDGMCCHCCKBGVVAAVH |
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|
Motif ID: |
UP00539 |
Motif name: |
Gli2_v016060_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
19 |
Similarity score: |
0.0469794 |
Alignment:
RTHBSYCGCCMCMYVCGBTVDH
---BMSMGCCYMCTKSTGGMHM
Original motif |
Reverse complement motif |
Consensus sequence: RTHBSYCGCCMCMYVCGBTVDH |
Consensus sequence: HDBABCGBKRGYGGCGMSBHAK |
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|
Motif ID: |
UP00538 |
Motif name: |
Gli1_v016060_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
19 |
Similarity score: |
0.0482204 |
Alignment:
BHCBCBCCGGGTGGTCYHVHDCH
YDRCCASYAGRKGGCRSYV----
Original motif |
Reverse complement motif |
Consensus sequence: BHCBCBCCGGGTGGTCYHVHDCH |
Consensus sequence: HGDHVHKGACCACCCGGBGBGDB |
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|
Dataset #: 3 |
Motif ID: 75 |
Motif name: Ddit3Cebpa |
Original motif |
Reverse complement motif |
Consensus sequence: VDRTGCAATMCC |
Consensus sequence: GGRATTGCAKHB |
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Best Matches for Motif ID 75 (Highest to Lowest)
Motif ID: |
UP00031 |
Motif name: |
Zbtb3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
3 |
Number of overlap: |
12 |
Similarity score: |
0.026968 |
Alignment:
BBBAVTGCAGTGBBVDD
--VDRTGCAATMCC---
Original motif |
Reverse complement motif |
Consensus sequence: DDBBBCACTGCABTBBB |
Consensus sequence: BBBAVTGCAGTGBBVDD |
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|
Motif ID: |
UP00035 |
Motif name: |
Hic1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
2 |
Number of overlap: |
12 |
Similarity score: |
0.0308236 |
Alignment:
DDBHGGTTGGCATVBD
---GGRATTGCAKHB-
Original motif |
Reverse complement motif |
Consensus sequence: DBBATGCCAACCHVHH |
Consensus sequence: DDBHGGTTGGCATVBD |
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|
|
Motif ID: |
UP00083 |
Motif name: |
Tcf7l2_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
12 |
Similarity score: |
0.0323758 |
Alignment:
VDVVATCAATCRBBHD
-VDRTGCAATMCC---
Original motif |
Reverse complement motif |
Consensus sequence: VDVVATCAATCRBBHD |
Consensus sequence: DHVBKGATTGATVBDV |
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|
|
Motif ID: |
UP00016 |
Motif name: |
Sry_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
12 |
Similarity score: |
0.0357538 |
Alignment:
HHDHDRAACAATDDVHV
---VDRTGCAATMCC--
Original motif |
Reverse complement motif |
Consensus sequence: HHDHDRAACAATDDVHV |
Consensus sequence: VHVHDATTGTTMHDDDH |
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|
|
|
Motif ID: |
UP00067 |
Motif name: |
Lef1_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
12 |
Similarity score: |
0.0387064 |
Alignment:
VDVVATCAATCAHBHD
-VDRTGCAATMCC---
Original motif |
Reverse complement motif |
Consensus sequence: VDVVATCAATCAHBHD |
Consensus sequence: DHVDTGATTGATVBDV |
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|
|
Dataset #: 3 |
Motif ID: 76 |
Motif name: E2F1 |
Original motif |
Reverse complement motif |
Consensus sequence: TTTSGCGC |
Consensus sequence: GCGCSAAA |
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Best Matches for Motif ID 76 (Highest to Lowest)
Motif ID: |
UP00001 |
Motif name: |
E2F2_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
7 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
HVBWYGGCGCCAADVBB
------GCGCSAAA---
Original motif |
Reverse complement motif |
Consensus sequence: HVBWYGGCGCCAADVBB |
Consensus sequence: BBBDTTGGCGCCKWVVD |
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|
|
|
Motif ID: |
UP00003 |
Motif name: |
E2F3_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.00182028 |
Alignment:
HBHWYGGCGCCAMDVBB
------GCGCSAAA---
Original motif |
Reverse complement motif |
Consensus sequence: HBHWYGGCGCCAMDVBB |
Consensus sequence: BBBDYTGGCGCCKWDBD |
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|
|
|
Motif ID: |
UP00072 |
Motif name: |
IRC900814_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.0237639 |
Alignment:
BHDWTTTGTCGTAHDD
----TTTSGCGC----
Original motif |
Reverse complement motif |
Consensus sequence: DDHTACGACAAAWDDB |
Consensus sequence: BHDWTTTGTCGTAHDD |
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Motif ID: |
UP00003 |
Motif name: |
E2F3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.0275636 |
Alignment:
WHSGCGCGCCHTDHB
-----GCGCSAAA--
Original motif |
Reverse complement motif |
Consensus sequence: VHDADGGCGCGCSHW |
Consensus sequence: WHSGCGCGCCHTDHB |
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Motif ID: |
UP00065 |
Motif name: |
Zfp161_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
9 |
Number of overlap: |
8 |
Similarity score: |
0.028109 |
Alignment:
DMMDGMGCGCGCGCHD
--------GCGCSAAA
Original motif |
Reverse complement motif |
Consensus sequence: DDGCGCGCGCRCHYRD |
Consensus sequence: DMMDGMGCGCGCGCHD |
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Dataset #: 3 |
Motif ID: 77 |
Motif name: EBF1 |
Original motif |
Reverse complement motif |
Consensus sequence: MCCCMAGGGA |
Consensus sequence: TCCCTYGGGY |
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Best Matches for Motif ID 77 (Highest to Lowest)
Motif ID: |
UP00057 |
Motif name: |
Zic2_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
10 |
Similarity score: |
0.0191678 |
Alignment:
VCCCCCCCGGGGGRB
---MCCCMAGGGA--
Original motif |
Reverse complement motif |
Consensus sequence: BMCCCCCGGGGGGGB |
Consensus sequence: VCCCCCCCGGGGGRB |
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Motif ID: |
UP00102 |
Motif name: |
Zic1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
10 |
Similarity score: |
0.0198894 |
Alignment:
CCCCCCCGGGGGHB
--MCCCMAGGGA--
Original motif |
Reverse complement motif |
Consensus sequence: BHCCCCCGGGGGGG |
Consensus sequence: CCCCCCCGGGGGHB |
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Motif ID: |
UP00006 |
Motif name: |
Zic3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
10 |
Similarity score: |
0.0208394 |
Alignment:
VCCCCCCCGGGGGRB
---MCCCMAGGGA--
Original motif |
Reverse complement motif |
Consensus sequence: BMCCCCCGGGGGGGB |
Consensus sequence: VCCCCCCCGGGGGRB |
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Motif ID: |
UP00010 |
Motif name: |
Tcfap2b_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
3 |
Number of overlap: |
10 |
Similarity score: |
0.0215181 |
Alignment:
HTGCCMTVKGGCMD
--TCCCTYGGGY--
Original motif |
Reverse complement motif |
Consensus sequence: DYGCCYBARGGCAH |
Consensus sequence: HTGCCMTVKGGCMD |
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Motif ID: |
UP00539 |
Motif name: |
Gli2_v015681_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
13 |
Number of overlap: |
10 |
Similarity score: |
0.0271543 |
Alignment:
HTBVVVDGGACCACCCRGRDBG
MCCCMAGGGA------------
Original motif |
Reverse complement motif |
Consensus sequence: HTBVVVDGGACCACCCRGRDBG |
Consensus sequence: CBDMCMGGGTGGTCCHVBVBAH |
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Dataset #: 3 |
Motif ID: 78 |
Motif name: Egr1 |
Original motif |
Reverse complement motif |
Consensus sequence: TTTSGCGC |
Consensus sequence: GCGCSAAA |
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Best Matches for Motif ID 78 (Highest to Lowest)
Motif ID: |
UP00001 |
Motif name: |
E2F2_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
7 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
HVBWYGGCGCCAADVBB
------GCGCSAAA---
Original motif |
Reverse complement motif |
Consensus sequence: HVBWYGGCGCCAADVBB |
Consensus sequence: BBBDTTGGCGCCKWVVD |
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Motif ID: |
UP00003 |
Motif name: |
E2F3_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.00182028 |
Alignment:
HBHWYGGCGCCAMDVBB
------GCGCSAAA---
Original motif |
Reverse complement motif |
Consensus sequence: HBHWYGGCGCCAMDVBB |
Consensus sequence: BBBDYTGGCGCCKWDBD |
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Motif ID: |
UP00072 |
Motif name: |
IRC900814_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.0237639 |
Alignment:
DDHTACGACAAAWDDB
----GCGCSAAA----
Original motif |
Reverse complement motif |
Consensus sequence: DDHTACGACAAAWDDB |
Consensus sequence: BHDWTTTGTCGTAHDD |
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Motif ID: |
UP00003 |
Motif name: |
E2F3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.0275636 |
Alignment:
WHSGCGCGCCHTDHB
-----GCGCSAAA--
Original motif |
Reverse complement motif |
Consensus sequence: VHDADGGCGCGCSHW |
Consensus sequence: WHSGCGCGCCHTDHB |
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Motif ID: |
UP00065 |
Motif name: |
Zfp161_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
9 |
Number of overlap: |
8 |
Similarity score: |
0.028109 |
Alignment:
DMMDGMGCGCGCGCHD
--------GCGCSAAA
Original motif |
Reverse complement motif |
Consensus sequence: DDGCGCGCGCRCHYRD |
Consensus sequence: DMMDGMGCGCGCGCHD |
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Dataset #: 3 |
Motif ID: 79 |
Motif name: ELK1 |
Original motif |
Reverse complement motif |
Consensus sequence: VDDCCGGAAR |
Consensus sequence: MTTCCGGHBV |
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Best Matches for Motif ID 79 (Highest to Lowest)
Motif ID: |
UP00414 |
Motif name: |
Ets1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
10 |
Similarity score: |
0.00796762 |
Alignment:
BDDDHACCGGAARTVDD
---VDDCCGGAAR----
Original motif |
Reverse complement motif |
Consensus sequence: BDDDHACCGGAARTVDD |
Consensus sequence: DDBAMTTCCGGTDHDHB |
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Motif ID: |
UP00015 |
Motif name: |
Ehf_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
3 |
Number of overlap: |
10 |
Similarity score: |
0.0101295 |
Alignment:
VBDABCCGGAAGTDD
--VDDCCGGAAR---
Original motif |
Reverse complement motif |
Consensus sequence: VBDABCCGGAAGTDD |
Consensus sequence: DDACTTCCGGBTHBB |
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Motif ID: |
UP00411 |
Motif name: |
Erg |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
10 |
Similarity score: |
0.0105752 |
Alignment:
BDDACCGGAAKTVBVB
-VDDCCGGAAR-----
Original motif |
Reverse complement motif |
Consensus sequence: VBBVAYTTCCGGTDDB |
Consensus sequence: BDDACCGGAAKTVBVB |
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Motif ID: |
UP00404 |
Motif name: |
Elf2 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
10 |
Similarity score: |
0.010693 |
Alignment:
BDWDCCGGAAGTHBBD
-VDDCCGGAAR-----
Original motif |
Reverse complement motif |
Consensus sequence: DBBHACTTCCGGDWDB |
Consensus sequence: BDWDCCGGAAGTHBBD |
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Motif ID: |
UP00423 |
Motif name: |
Gm5454 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
10 |
Similarity score: |
0.011366 |
Alignment:
DVHACCGGAAGTHDDV
-VDDCCGGAAR-----
Original motif |
Reverse complement motif |
Consensus sequence: VDHHACTTCCGGTHVH |
Consensus sequence: DVHACCGGAAGTHDDV |
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Dataset #: 3 |
Motif ID: 80 |
Motif name: ELK4 |
Original motif |
Reverse complement motif |
Consensus sequence: ACCGGAAGT |
Consensus sequence: ACTTCCGGT |
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Best Matches for Motif ID 80 (Highest to Lowest)
Motif ID: |
UP00013 |
Motif name: |
Gabpa_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
9 |
Similarity score: |
0 |
Alignment:
HVHHACCGGAAGTDHHV
----ACCGGAAGT----
Original motif |
Reverse complement motif |
Consensus sequence: HVHHACCGGAAGTDHHV |
Consensus sequence: BHHHACTTCCGGTHHBD |
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Motif ID: |
UP00414 |
Motif name: |
Ets1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
9 |
Similarity score: |
0.0025276 |
Alignment:
BDDDHACCGGAARTVDD
-----ACCGGAAGT---
Original motif |
Reverse complement motif |
Consensus sequence: BDDDHACCGGAARTVDD |
Consensus sequence: DDBAMTTCCGGTDHDHB |
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Motif ID: |
UP00421 |
Motif name: |
Etv1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
9 |
Similarity score: |
0.00356917 |
Alignment:
MVHBACCGGAAGTVDVH
----ACCGGAAGT----
Original motif |
Reverse complement motif |
Consensus sequence: MVHBACCGGAAGTVDVH |
Consensus sequence: HBDBACTTCCGGTBHVY |
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Motif ID: |
UP00410 |
Motif name: |
Elk1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
9 |
Similarity score: |
0.00371937 |
Alignment:
VVHBACCGGAAGTDBHD
----ACCGGAAGT----
Original motif |
Reverse complement motif |
Consensus sequence: VVHBACCGGAAGTDBHD |
Consensus sequence: DHBDACTTCCGGTVHVB |
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Motif ID: |
UP00420 |
Motif name: |
Elk3 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
9 |
Similarity score: |
0.0045671 |
Alignment:
DVBBACCGGAAGYDVVV
----ACCGGAAGT----
Original motif |
Reverse complement motif |
Consensus sequence: DVBBACCGGAAGYDVVV |
Consensus sequence: VBVDMCTTCCGGTVBVD |
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Dataset #: 3 |
Motif ID: 81 |
Motif name: ESR1 |
Original motif |
Reverse complement motif |
Consensus sequence: VDBHMAGGTCACCCTGACCY |
Consensus sequence: MGGTCAGGGTGACCTRDBHV |
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Best Matches for Motif ID 81 (Highest to Lowest)
Motif ID: |
UP00538 |
Motif name: |
Gli1_v016060_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
20 |
Similarity score: |
0.0658405 |
Alignment:
BDDHVDKGCCACCCVCGCTDBVH
VDBHMAGGTCACCCTGACCY---
Original motif |
Reverse complement motif |
Consensus sequence: HVBDAGCGBGGGTGGCRDBDDDB |
Consensus sequence: BDDHVDKGCCACCCVCGCTDBVH |
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Motif ID: |
UP00098 |
Motif name: |
Rfx3_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
20 |
Similarity score: |
0.0689748 |
Alignment:
BDBBVBVGTAWCCAAGVBHBAGB
VDBHMAGGTCACCCTGACCY---
Original motif |
Reverse complement motif |
Consensus sequence: VCTBHBVCTTGGWTACVVVVVDB |
Consensus sequence: BDBBVBVGTAWCCAAGVBHBAGB |
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Motif ID: |
UP00539 |
Motif name: |
Gli2_v015681_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
20 |
Similarity score: |
0.0701247 |
Alignment:
CBDMCMGGGTGGTCCHVBVBAH
MGGTCAGGGTGACCTRDBHV--
Original motif |
Reverse complement motif |
Consensus sequence: HTBVVVDGGACCACCCRGRDBG |
Consensus sequence: CBDMCMGGGTGGTCCHVBVBAH |
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Motif ID: |
UP00539 |
Motif name: |
Gli2_v015681_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
20 |
Similarity score: |
0.0711267 |
Alignment:
HVGVSAGGAGGGTCYHHHHYVH
MGGTCAGGGTGACCTRDBHV--
Original motif |
Reverse complement motif |
Consensus sequence: HVGVSAGGAGGGTCYHHHHYVH |
Consensus sequence: DVMHHDHKGACCCTCCTSVCBH |
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Motif ID: |
UP00540 |
Motif name: |
Gli3_v016060_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
20 |
Similarity score: |
0.0742427 |
Alignment:
CVHBSCGGGTGGTCMHVHHCDH
-VDBHMAGGTCACCCTGACCY-
Original motif |
Reverse complement motif |
Consensus sequence: HDGHHBHRGACCACCCGSVDVG |
Consensus sequence: CVHBSCGGGTGGTCMHVHHCDH |
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Dataset #: 3 |
Motif ID: 82 |
Motif name: ESR2 |
Original motif |
Reverse complement motif |
Consensus sequence: VHRGGTCABDBTGMCCTB |
Consensus sequence: BAGGYCABHBTGACCKHV |
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Best Matches for Motif ID 82 (Highest to Lowest)
Motif ID: |
UP00034 |
Motif name: |
Sox7_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
18 |
Similarity score: |
0.0443894 |
Alignment:
GTVBDAATTGTVTGHGDDHKVB
---VHRGGTCABDBTGMCCTB-
Original motif |
Reverse complement motif |
Consensus sequence: GTVBDAATTGTVTGHGDDHKVB |
Consensus sequence: VVYDDDCHCAVACAATTDBVAC |
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Motif ID: |
UP00538 |
Motif name: |
Gli1_v016060_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
18 |
Similarity score: |
0.049219 |
Alignment:
BDDHVDKGCCACCCVCGCTDBVH
---VHRGGTCABDBTGMCCTB--
Original motif |
Reverse complement motif |
Consensus sequence: HVBDAGCGBGGGTGGCRDBDDDB |
Consensus sequence: BDDHVDKGCCACCCVCGCTDBVH |
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Motif ID: |
UP00050 |
Motif name: |
Bhlhb2_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
18 |
Similarity score: |
0.0509182 |
Alignment:
DDHBHBSTCACGTGAHBBDHHM
--VHRGGTCABDBTGMCCTB--
Original motif |
Reverse complement motif |
Consensus sequence: RDHDBVDTCACGTGASBHVHDH |
Consensus sequence: DDHBHBSTCACGTGAHBBDHHM |
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Motif ID: |
UP00540 |
Motif name: |
Gli3_v015681_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
18 |
Similarity score: |
0.0527075 |
Alignment:
DVTTVVCVYGGHGGYCHHDMYB
-BAGGYCABHBTGACCKHV---
Original motif |
Reverse complement motif |
Consensus sequence: DVTTVVCVYGGHGGYCHHDMYB |
Consensus sequence: VMYDHDGMCCHCCKBGVVAAVH |
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Motif ID: |
UP00034 |
Motif name: |
Sox7_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
18 |
Similarity score: |
0.0541044 |
Alignment:
WBHHHHHMDATTGTTHDHDVHH
-BAGGYCABHBTGACCKHV---
Original motif |
Reverse complement motif |
Consensus sequence: HHBDHDDAACAATDRHHHHHBW |
Consensus sequence: WBHHHHHMDATTGTTHDHDVHH |
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|
Dataset #: 3 |
Motif ID: 83 |
Motif name: Esrrb |
Original motif |
Reverse complement motif |
Consensus sequence: VBBYCAAGGTCA |
Consensus sequence: TGACCTTGMBBB |
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Best Matches for Motif ID 83 (Highest to Lowest)
Motif ID: |
UP00079 |
Motif name: |
Esrra_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
12 |
Similarity score: |
0 |
Alignment:
HHBVHTGACCTTGVDHD
-----TGACCTTGMBBB
Original motif |
Reverse complement motif |
Consensus sequence: DHDBCAAGGTCAHVBDH |
Consensus sequence: HHBVHTGACCTTGVDHD |
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|
|
Motif ID: |
UP00009 |
Motif name: |
Nr2f2_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
1 |
Number of overlap: |
12 |
Similarity score: |
0.0205471 |
Alignment:
DHBHAAAGGTCAHVHB
VBBYCAAGGTCA----
Original motif |
Reverse complement motif |
Consensus sequence: DHBHAAAGGTCAHVHB |
Consensus sequence: BHVDTGACCTTTDVDD |
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|
|
Motif ID: |
UP00048 |
Motif name: |
Rara |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
1 |
Number of overlap: |
12 |
Similarity score: |
0.0214372 |
Alignment:
DHBHAAAGGTCACVHD
VBBYCAAGGTCA----
Original motif |
Reverse complement motif |
Consensus sequence: DHBHAAAGGTCACVHD |
Consensus sequence: HHVGTGACCTTTDVDD |
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|
|
Motif ID: |
UP00009 |
Motif name: |
Nr2f2_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
12 |
Similarity score: |
0.0430759 |
Alignment:
HVBVTGACCCSGBVBV
----TGACCTTGMBBB
Original motif |
Reverse complement motif |
Consensus sequence: VBVBCSGGGTCAVBBH |
Consensus sequence: HVBVTGACCCSGBVBV |
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|
|
Motif ID: |
UP00066 |
Motif name: |
Hnf4a_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
1 |
Number of overlap: |
12 |
Similarity score: |
0.0451776 |
Alignment:
BDBVMGGGGTCAABHDV
VBBYCAAGGTCA-----
Original motif |
Reverse complement motif |
Consensus sequence: BDBVMGGGGTCAABHDV |
Consensus sequence: BHHVTTGACCCCYVVDB |
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|
|
Dataset #: 3 |
Motif ID: 84 |
Motif name: GABPA |
Original motif |
Reverse complement motif |
Consensus sequence: CCGGAAGTGVV |
Consensus sequence: VVCACTTCCGG |
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Best Matches for Motif ID 84 (Highest to Lowest)
Motif ID: |
UP00013 |
Motif name: |
Gabpa_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
11 |
Similarity score: |
0 |
Alignment:
BHHHACTTCCGGTHHBD
-VVCACTTCCGG-----
Original motif |
Reverse complement motif |
Consensus sequence: HVHHACCGGAAGTDHHV |
Consensus sequence: BHHHACTTCCGGTHHBD |
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Motif ID: |
UP00410 |
Motif name: |
Elk1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
11 |
Similarity score: |
0.000136484 |
Alignment:
VVHBACCGGAAGTDBHD
-----CCGGAAGTGVV-
Original motif |
Reverse complement motif |
Consensus sequence: VVHBACCGGAAGTDBHD |
Consensus sequence: DHBDACTTCCGGTVHVB |
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Motif ID: |
UP00420 |
Motif name: |
Elk3 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
11 |
Similarity score: |
0.000219706 |
Alignment:
DVBBACCGGAAGYDVVV
-----CCGGAAGTGVV-
Original motif |
Reverse complement motif |
Consensus sequence: DVBBACCGGAAGYDVVV |
Consensus sequence: VBVDMCTTCCGGTVBVD |
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Motif ID: |
UP00421 |
Motif name: |
Etv1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
2 |
Number of overlap: |
11 |
Similarity score: |
0.000932023 |
Alignment:
MVHBACCGGAAGTVDVH
-----CCGGAAGTGVV-
Original motif |
Reverse complement motif |
Consensus sequence: MVHBACCGGAAGTVDVH |
Consensus sequence: HBDBACTTCCGGTBHVY |
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Motif ID: |
UP00404 |
Motif name: |
Elf2 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
11 |
Similarity score: |
0.00527483 |
Alignment:
DBBHACTTCCGGDWDB
-VVCACTTCCGG----
Original motif |
Reverse complement motif |
Consensus sequence: DBBHACTTCCGGDWDB |
Consensus sequence: BDWDCCGGAAGTHBBD |
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Dataset #: 3 |
Motif ID: 85 |
Motif name: Hand1Tcfe2a |
Original motif |
Reverse complement motif |
Consensus sequence: BRTCTGGMWT |
Consensus sequence: AWRCCAGAMB |
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Best Matches for Motif ID 85 (Highest to Lowest)
Motif ID: |
UP00000 |
Motif name: |
Smad3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
10 |
Similarity score: |
0 |
Alignment:
HVHBVTGTCTGGDDHDD
-----BRTCTGGMWT--
Original motif |
Reverse complement motif |
Consensus sequence: HDHDDCCAGACABBHVH |
Consensus sequence: HVHBVTGTCTGGDDHDD |
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Motif ID: |
UP00404 |
Motif name: |
Elf2 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
10 |
Similarity score: |
0.0172295 |
Alignment:
BDWDCCGGAAGTHBBD
-AWRCCAGAMB-----
Original motif |
Reverse complement motif |
Consensus sequence: DBBHACTTCCGGDWDB |
Consensus sequence: BDWDCCGGAAGTHBBD |
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Motif ID: |
UP00046 |
Motif name: |
Tcfe2a_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
2 |
Number of overlap: |
10 |
Similarity score: |
0.0178635 |
Alignment:
VBBDMYCATCTGVHHBH
------BRTCTGGMWT-
Original motif |
Reverse complement motif |
Consensus sequence: HVDDVCAGATGKYHBBV |
Consensus sequence: VBBDMYCATCTGVHHBH |
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Motif ID: |
UP00040 |
Motif name: |
Irf5_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
10 |
Similarity score: |
0.022871 |
Alignment:
VBHAKTCTCGHTHHV
---BRTCTGGMWT--
Original motif |
Reverse complement motif |
Consensus sequence: BHDAHCGAGARTHBV |
Consensus sequence: VBHAKTCTCGHTHHV |
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Motif ID: |
UP00038 |
Motif name: |
Spdef_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
10 |
Similarity score: |
0.0241958 |
Alignment:
VHRCATCCGGATHHBB
---BRTCTGGMWT---
Original motif |
Reverse complement motif |
Consensus sequence: VHRCATCCGGATHHBB |
Consensus sequence: VVHHATCCGGATGKHV |
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Dataset #: 3 |
Motif ID: 86 |
Motif name: HIF1AARNT |
Original motif |
Reverse complement motif |
Consensus sequence: VBACGTGV |
Consensus sequence: VCACGTBV |
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Best Matches for Motif ID 86 (Highest to Lowest)
Motif ID: |
UP00097 |
Motif name: |
Mtf1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
2 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
HDYTTGCACACGDHBH
-------VCACGTBV-
Original motif |
Reverse complement motif |
Consensus sequence: DBDHCGTGTGCAAMDH |
Consensus sequence: HDYTTGCACACGDHBH |
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Motif ID: |
UP00060 |
Motif name: |
Max_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.000574345 |
Alignment:
HHVBABCACGTGSTHD
-----VCACGTBV---
Original motif |
Reverse complement motif |
Consensus sequence: DDASCACGTGBTBVDD |
Consensus sequence: HHVBABCACGTGSTHD |
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Motif ID: |
UP00050 |
Motif name: |
Bhlhb2_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
9 |
Number of overlap: |
8 |
Similarity score: |
0.00642455 |
Alignment:
YDYBDHTMCACGTGGADDBMDGT
-------VBACGTGV--------
Original motif |
Reverse complement motif |
Consensus sequence: YDYBDHTMCACGTGGADDBMDGT |
Consensus sequence: ACHRBHDTCCACGTGYAHHBMHM |
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Motif ID: |
UP00084 |
Motif name: |
Gmeb1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.0131171 |
Alignment:
BVVDVRYACGTRYVBHB
-----VBACGTGV----
Original motif |
Reverse complement motif |
Consensus sequence: BHBBKKACGTMMVDBVB |
Consensus sequence: BVVDVRYACGTRYVBHB |
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Motif ID: |
UP00050 |
Motif name: |
Bhlhb2_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0.014006 |
Alignment:
RDHDBVDTCACGTGASBHVHDH
-------VCACGTBV-------
Original motif |
Reverse complement motif |
Consensus sequence: RDHDBVDTCACGTGASBHVHDH |
Consensus sequence: DDHBHBSTCACGTGAHBBDHHM |
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Dataset #: 3 |
Motif ID: 87 |
Motif name: HNF4A |
Original motif |
Reverse complement motif |
Consensus sequence: RGGBCAAAGKYCA |
Consensus sequence: TGMYCTTTGBCCK |
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Best Matches for Motif ID 87 (Highest to Lowest)
Motif ID: |
UP00058 |
Motif name: |
Tcf3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
2 |
Number of overlap: |
13 |
Similarity score: |
0.0357776 |
Alignment:
HHHASATCAAAGVRHHH
---RGGBCAAAGKYCA-
Original motif |
Reverse complement motif |
Consensus sequence: HHHASATCAAAGVRHHH |
Consensus sequence: HHHKVCTTTGATSTHHH |
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Motif ID: |
UP00054 |
Motif name: |
Tcf7_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
2 |
Number of overlap: |
13 |
Similarity score: |
0.0357792 |
Alignment:
BHHASATCAAAGGAHHH
---RGGBCAAAGKYCA-
Original motif |
Reverse complement motif |
Consensus sequence: BHHASATCAAAGGAHHH |
Consensus sequence: HHHTCCTTTGATSTHHV |
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Motif ID: |
UP00067 |
Motif name: |
Lef1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
13 |
Similarity score: |
0.0359011 |
Alignment:
VDDAGATCAAAGGKDDD
---RGGBCAAAGKYCA-
Original motif |
Reverse complement motif |
Consensus sequence: DDDYCCTTTGATCTDDV |
Consensus sequence: VDDAGATCAAAGGKDDD |
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Motif ID: |
UP00083 |
Motif name: |
Tcf7l2_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
13 |
Similarity score: |
0.0360786 |
Alignment:
BDDASATCAAAGGMDDD
---RGGBCAAAGKYCA-
Original motif |
Reverse complement motif |
Consensus sequence: DDDYCCTTTGATSTDDV |
Consensus sequence: BDDASATCAAAGGMDDD |
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Motif ID: |
UP00046 |
Motif name: |
Tcfe2a_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
13 |
Similarity score: |
0.0405764 |
Alignment:
HVDDVCAGATGKYHBBV
-RGGBCAAAGKYCA---
Original motif |
Reverse complement motif |
Consensus sequence: HVDDVCAGATGKYHBBV |
Consensus sequence: VBBDMYCATCTGVHHBH |
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Dataset #: 3 |
Motif ID: 88 |
Motif name: INSM1 |
Original motif |
Reverse complement motif |
Consensus sequence: TGYCAGGGGGCR |
Consensus sequence: MGCCCCCTGMCA |
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Best Matches for Motif ID 88 (Highest to Lowest)
Motif ID: |
UP00022 |
Motif name: |
Zfp740_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
12 |
Similarity score: |
0.00085101 |
Alignment:
HVKDCCGGGGGGWADDD
--TGYCAGGGGGCR---
Original motif |
Reverse complement motif |
Consensus sequence: DDDTWCCCCCCGGDRVH |
Consensus sequence: HVKDCCGGGGGGWADDD |
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Motif ID: |
UP00002 |
Motif name: |
Sp4_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
12 |
Similarity score: |
0.00406431 |
Alignment:
BVVHAGGGGGCGRDHHB
TGYCAGGGGGCR-----
Original motif |
Reverse complement motif |
Consensus sequence: BDHHMCGCCCCCTHVBB |
Consensus sequence: BVVHAGGGGGCGRDHHB |
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Motif ID: |
UP00047 |
Motif name: |
Zbtb7b_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
3 |
Number of overlap: |
12 |
Similarity score: |
0.00486866 |
Alignment:
VHWTTHGGGGGGVDD
--TGYCAGGGGGCR-
Original motif |
Reverse complement motif |
Consensus sequence: DDVCCCCCCHAAWHB |
Consensus sequence: VHWTTHGGGGGGVDD |
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Motif ID: |
UP00079 |
Motif name: |
Esrra_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
1 |
Number of overlap: |
12 |
Similarity score: |
0.00862553 |
Alignment:
VKBBAGGGGTCAHDBBH
TGYCAGGGGGCR-----
Original motif |
Reverse complement motif |
Consensus sequence: VKBBAGGGGTCAHDBBH |
Consensus sequence: DBBHHTGACCCCTBBYV |
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Motif ID: |
UP00024 |
Motif name: |
Glis2_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
12 |
Similarity score: |
0.00936306 |
Alignment:
HKBBGGGGGGTCVHHH
-TGYCAGGGGGCR---
Original motif |
Reverse complement motif |
Consensus sequence: HHHVGACCCCCCVBRD |
Consensus sequence: HKBBGGGGGGTCVHHH |
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Dataset #: 3 |
Motif ID: 89 |
Motif name: Klf4 |
Original motif |
Reverse complement motif |
Consensus sequence: DGGGYGKGGC |
Consensus sequence: GCCYCMCCCD |
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Best Matches for Motif ID 89 (Highest to Lowest)
Motif ID: |
UP00093 |
Motif name: |
Klf7_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
10 |
Similarity score: |
0 |
Alignment:
DHHDGGGCGRGGKHBH
---DGGGYGKGGC---
Original motif |
Reverse complement motif |
Consensus sequence: HBDRCCMCGCCCHHHD |
Consensus sequence: DHHDGGGCGRGGKHBH |
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Motif ID: |
UP00021 |
Motif name: |
Zfp281_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
10 |
Similarity score: |
0.0153308 |
Alignment:
DBCCCCCCCCCCMYC
---GCCYCMCCCD--
Original motif |
Reverse complement motif |
Consensus sequence: DBCCCCCCCCCCMYC |
Consensus sequence: GKRGGGGGGGGGGBD |
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Motif ID: |
UP00002 |
Motif name: |
Sp4_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
3 |
Number of overlap: |
10 |
Similarity score: |
0.0186791 |
Alignment:
BDWAGGCGTGBCHHD
--DGGGYGKGGC---
Original motif |
Reverse complement motif |
Consensus sequence: BDWAGGCGTGBCHHD |
Consensus sequence: HHDGBCACGCCTWDB |
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Motif ID: |
UP00022 |
Motif name: |
Zfp740_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
3 |
Number of overlap: |
10 |
Similarity score: |
0.0218399 |
Alignment:
HVBCCCCCCCCMHHHB
--GCCYCMCCCD----
Original motif |
Reverse complement motif |
Consensus sequence: HVBCCCCCCCCMHHHB |
Consensus sequence: BHHDYGGGGGGGGBVD |
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Motif ID: |
UP00007 |
Motif name: |
Egr1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
10 |
Similarity score: |
0.0249586 |
Alignment:
HCCGCCCCCGCAHB
GCCYCMCCCD----
Original motif |
Reverse complement motif |
Consensus sequence: HCCGCCCCCGCAHB |
Consensus sequence: VHTGCGGGGGCGGH |
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Dataset #: 3 |
Motif ID: 90 |
Motif name: Mafb |
Original motif |
Reverse complement motif |
Consensus sequence: GCTGACDB |
Consensus sequence: BHGTCAGC |
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Best Matches for Motif ID 90 (Highest to Lowest)
Motif ID: |
UP00044 |
Motif name: |
Mafk_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0.00415984 |
Alignment:
DWAAAWTGCTGACTH
-------GCTGACDB
Original motif |
Reverse complement motif |
Consensus sequence: DWAAAWTGCTGACTH |
Consensus sequence: HAGTCAGCAWTTTWD |
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Motif ID: |
UP00045 |
Motif name: |
Mafb_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
7 |
Number of overlap: |
8 |
Similarity score: |
0.012743 |
Alignment:
HAAWDTGCTGACDWARH
------GCTGACDB---
Original motif |
Reverse complement motif |
Consensus sequence: HAAWDTGCTGACDWARH |
Consensus sequence: DMTWDGTCAGCADWTTH |
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Motif ID: |
UP00099 |
Motif name: |
Ascl2_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
9 |
Number of overlap: |
8 |
Similarity score: |
0.0222535 |
Alignment:
HHDVVGCAGCTGVBKVB
--------GCTGACDB-
Original motif |
Reverse complement motif |
Consensus sequence: BBYVVCAGCTGCBVHHD |
Consensus sequence: HHDVVGCAGCTGVBKVB |
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Motif ID: |
UP00527 |
Motif name: |
Foxn4_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.0269322 |
Alignment:
VHYTCCDWCCGCGTCMMTHWHV
----BHGTCAGC----------
Original motif |
Reverse complement motif |
Consensus sequence: VDWDARRGACGCGGWHGGAKHV |
Consensus sequence: VHYTCCDWCCGCGTCMMTHWHV |
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Motif ID: |
UP00050 |
Motif name: |
Bhlhb2_secondary |
Species: |
Mus musculus |
Matching format |