**************************************************************************************************************************************************************************************************** MOTIFSIM - Motif Similarity Detection Tool Version 2.2 **************************************************************************************************************************************************************************************************** INPUT **************************************************************************************************************************************************************************************************** Input Parameters Number of files: 1 Number of top significant motifs: 10 Number of best matches: 5 Similarity cutoff: >= 0.75 Matching motif database: UniProbe Mus Musculus Motif tree: Yes Combined similar motifs: Yes Output file type: All Output file format: All Input files and motif counts File name Count of motifs Dataset # CisFinder_DM721_Cluster.txt 153 1 **************************************************************************************************************************************************************************************************** RESULTS **************************************************************************************************************************************************************************************************** *************************************************************** Combined Motifs for Top Best Match Motif ID 1 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C001 C002 Reverse Complement Reverse Complement WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW MKKTKKGTGTGTGTGTGTKKKTA HTKTKTKTKTKTKTKTKTKTKWWWWHTTTT Direction: Backward Position #: 1 Overlap #: 23 Alignment: WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW -------MKKTKKGTGTGTGTGTGTKKKTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C010 Reverse Complement Original Motif AAAAHWWWWRARARARAYARAYARARARAH WWWAAAAWWAAAAAAAAAAWW WWWAAAAWWAAAAAAADAAWHARAYARARARAH Direction: Forward Position #: 4 Overlap #: 18 Alignment: ---AAAAHWWWWRARARARAYARAYARARARAH WWWAAAAWWAAAAAAAAAAWW------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C016 Combined Motif Reverse Complement Reverse Complement HTKTKTKTKTKTHWTTDTTTTTTTWWTTTTWWW WWTTYTWTYTTWDTTTWTTWH HTKTKTDTTTBTWTTTTTKTTTWTTWHTTTWWW Direction: Forward Position #: 7 Overlap #: 21 Alignment: HTKTKTKTKTKTHWTTDTTTTTTTWWTTTTWWW ------WWTTYTWTYTTWDTTTWTTWH------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C030 Combined Motif Reverse Complement Original Motif WWWAAAHWAAWAAARAAAAAWAVAAADARARAH WYAAAAAMAAAAAAAAWAM WWWAAAWHAAAAAAAAAAAAAAHAAADARARAH Direction: Forward Position #: 7 Overlap #: 19 Alignment: WWWAAAHWAAWAAARAAAAAWAVAAADARARAH ------WYAAAAAMAAAAAAAAWAM-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C069 Combined Motif Original Motif Original Motif WWWAAAWHAAAAAAAAAAAAAAHAAADARARAH AHAAMAAYWDYAAMAAHD WWAAAAAHAAHAAAAAHAAAAAHAAADARARAH Direction: Forward Position #: 1 Overlap #: 18 Alignment: WWWAAAWHAAAAAAAAAAAAAAHAAADARARAH AHAAMAAYWDYAAMAAHD--------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C057 Combined Motif Reverse Complement Reverse Complement HTKTKTDTTTHTTTTTHTTTTTHTTHTTTTTWW HWTRTTMKTYTTMKTYKW HTKTKTDWTTDTTHTTYTTHTTYTTHTTTTTWW Direction: Forward Position #: 8 Overlap #: 18 Alignment: HTKTKTDTTTHTTTTTHTTTTTHTTHTTTTTWW -------HWTRTTMKTYTTMKTYKW-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 2 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C002 C001 Reverse Complement Reverse Complement MKKTKKGTGTGTGTGTGTKKKTA WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW TTWWWMTKTKTDTKTKTKTKTKTDTTTWWW Direction: Backward Position #: 6 Overlap #: 23 Alignment: --MKKTKKGTGTGTGTGTGTKKKTA----- WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 3 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 C004 Original Motif Original Motif GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC SSSSSCSSSSSCCSSSSCCSCSSSSSS GSCCCBSSCYSCCSCCCCCCSSCCCCSSSC Direction: Forward Position #: 1 Overlap #: 27 Alignment: GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC SSSSSCSSSSSCCSSSSCCSCSSSSSS--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C002 Combined Motif Reverse Complement Reverse Complement GSSSGGGGSSGGGGGGSGGSKGSSBGGGSC MKKTKKGTGTGTGTGTGTKKKTA GSSSGGVKGBGGGKGKGKGTGKGKKKKBVC Direction: Forward Position #: 7 Overlap #: 23 Alignment: GSSSGGGGSSGGGGGGSGGSKGSSBGGGSC ------MKKTKKGTGTGTGTGTGTKKKTA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C020 Combined Motif Reverse Complement Original Motif GVBYYYRCRCACRCRCRCCCVCYVCCSSSC BSCVCCSCCVCSCCCACS GVBYYBSCRCMSMCVCVCCCVCCVCCSSSC Direction: Forward Position #: 6 Overlap #: 18 Alignment: GVBYYYRCRCACRCRCRCCCVCYVCCSSSC -----BSCVCCSCCVCSCCCACS------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C037 Combined Motif Original Motif Original Motif GVBYYBSCRCMSMCVCVCCCVCCVCCSSSC SVCCGBCMCCSYCMCCVB GVBYYBSVVCVSCCCCVCCMVCBVCCSSSC Direction: Forward Position #: 7 Overlap #: 18 Alignment: GVBYYBSCRCMSMCVCVCCCVCCVCCSSSC ------SVCCGBCMCCSYCMCCVB------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C012 Combined Motif Original Motif Reverse Complement GVBYYBSVVCVSCCCCVCCMVCBVCCSSSC YRTCTCTCTCTRYCTCTRR BRYCYCBCBCBVCCBCBVVMVCBVCCSSSC Direction: Forward Position #: 1 Overlap #: 19 Alignment: GVBYYBSVVCVSCCCCVCCMVCBVCCSSSC YRTCTCTCTCTRYCTCTRR----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 4 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C004 C003 Original Motif Original Motif SSSSSCSSSSSCCSSSSCCSCSSSSSS GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC SCSCYCBSCCBVCCCSCCCCCSSCCCCSSG Direction: Backward Position #: 3 Overlap #: 27 Alignment: -SSSSSCSSSSSCCSSSSCCSCSSSSSS-- GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C012 Combined Motif Original Motif Reverse Complement SCSCYCBSCCBVCCCSCCCCCSSCCCCSSG YRTCTCTCTCTRYCTCTRR SCSCYCYVYCTBYCYCBVYCYCBVVCCSSG Direction: Forward Position #: 7 Overlap #: 19 Alignment: SCSCYCBSCCBVCCCSCCCCCSSCCCCSSG ------YRTCTCTCTCTRYCTCTRR----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C037 Combined Motif Original Motif Original Motif SCSCYCYVYCTBYCYCBVYCYCBVVCCSSG SVCCGBCMCCSYCMCCVB SCCCBCCVCCBBCMYCBVYCYCBVVCCSSG Direction: Forward Position #: 1 Overlap #: 18 Alignment: SCSCYCYVYCTBYCYCBVYCYCBVVCCSSG SVCCGBCMCCSYCMCCVB------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C020 Combined Motif Original Motif Original Motif SCCCBCCVCCBBCMYCBVYCYCBVVCCSSG BSCVCCSCCVCSCCCACS SCCCBCCSCVCCSCCCCSCCCVCVVCCSSG Direction: Forward Position #: 7 Overlap #: 18 Alignment: SCCCBCCVCCBBCMYCBVYCYCBVVCCSSG ------BSCVCCSCCVCSCCCACS------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C124 Combined Motif Original Motif Original Motif SCCCBCCSCVCCSCCCCSCCCVCVVCCSSG WSACSRSGCTGSYSTCSW DSMCSVSSCTSSYCYCSHCCCVCVVCCSSG Direction: Forward Position #: 1 Overlap #: 18 Alignment: SCCCBCCSCVCCSCCCCSCCCVCVVCCSSG WSACSRSGCTGSYSTCSW------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 5 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C005 C013 Original Motif Original Motif TCTGTAGMCCAGGCTGGCCTYGW WVCTGGAACTCACTHTGTAGACCAGGM WYCTGKARCYCASKCTGKMSWCSAGGM Direction: Forward Position #: 2 Overlap #: 23 Alignment: -TCTGTAGMCCAGGCTGGCCTYGW--- WVCTGGAACTCACTHTGTAGACCAGGM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C007 Original Motif Original Motif WYCTGKARCYCASKCTGKMSWCSAGGM KTTSTGAGTTCVAGGMCAGCCTS KWYCTGRRDYCCAGGCYRGCCWSSAGGM Direction: Forward Position #: 2 Overlap #: 22 Alignment: -WYCTGKARCYCASKCTGKMSWCSAGGM KTTSTGAGTTCVAGGMCAGCCTS----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C027 Original Motif Original Motif KWYCTGRRDYCCAGGCYRGCCWSSAGGM MRCAGRGAAACCCTGTCTYDW MDHAVDGARACCCWGKCTVDHCWSSAGGM Direction: Forward Position #: 2 Overlap #: 20 Alignment: -KWYCTGRRDYCCAGGCYRGCCWSSAGGM MRCAGRGAAACCCTGTCTYDW-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C015 Combined Motif Original Motif Original Motif MDHAVDGARACCCWGKCTVDHCWSSAGGM DVAGCCWKGGCTACAVAGCK MDHAVDGVARCCMDGKCTABASAGCWGGM Direction: Forward Position #: 7 Overlap #: 20 Alignment: MDHAVDGARACCCWGKCTVDHCWSSAGGM ------DVAGCCWKGGCTACAVAGCK--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C009 Original Motif Original Motif MDHAVDGVARCCMDGKCTABASAGCWGGM ABGCCTTTAATCCCAGCACTHR AHRCMTTKAAKCCCAGBMYWBVSAGCWGGM Direction: Forward Position #: 2 Overlap #: 21 Alignment: -MDHAVDGVARCCMDGKCTABASAGCWGGM ABGCCTTTAATCCCAGCACTHR-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 6 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C006 C002 Original Motif Original Motif SWCACACASWCACACWSW TAYRYACACACACACACRYAYRY TABACACACACACACACACAYRY Direction: Forward Position #: 3 Overlap #: 18 Alignment: --SWCACACASWCACACWSW--- TAYRYACACACACACACRYAYRY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C017 Combined Motif Original Motif Original Motif TABACACACACACACACACAYRY WSWGAGASWSAGAGASWS TABWSASASASASASASASWCRY Direction: Forward Position #: 4 Overlap #: 18 Alignment: TABACACACACACACACACAYRY ---WSWGAGASWSAGAGASWS-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C016 Combined Motif Reverse Complement Reverse Complement MKGWSTSTSTSTSTSTSTSWBTA WWTTYTWTYTTWDTTTWTTWH MKGWBTBTBTDTBTBTBTBTBTHWH Direction: Forward Position #: 5 Overlap #: 19 Alignment: MKGWSTSTSTSTSTSTSTSWBTA-- ----WWTTYTWTYTTWDTTTWTTWH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C012 Original Motif Reverse Complement MKGWBTBTBTDTBTBTBTBTBTHWH YRTCTCTCTCTRYCTCTRR YVTSTBTCTCTDTCTCTRDBTBTHWH Direction: Forward Position #: 2 Overlap #: 18 Alignment: -MKGWBTBTBTDTBTBTBTBTBTHWH YRTCTCTCTCTRYCTCTRR------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C037 Combined Motif Original Motif Reverse Complement YVTSTBTCTCTDTCTCTRDBTBTHWH BVGGYGKSGGYGBCGGVS YVKSKBTGTCKGYSTCKGDBTBTHWH Direction: Forward Position #: 3 Overlap #: 18 Alignment: YVTSTBTCTCTDTCTCTRDBTBTHWH --BVGGYGKSGGYGBCGGVS------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 7 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C007 C019 Reverse Complement Reverse Complement SAGGCTGYCCTVGAACTCASAAY CTGCCTCCCAAGTGCTGGGMWR MKGCYKCCCWAGWRCTSRGAAVS Direction: Backward Position #: 1 Overlap #: 22 Alignment: SAGGCTGYCCTVGAACTCASAAY -CTGCCTCCCAAGTGCTGGGMWR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C005 Original Motif Reverse Complement MKGCYKCCCWAGWRCTSRGAAVS WCKAGGCCAGCCTGGYCTACAGA WCKAGGCCDSCCTRGHCYWCAGAAVS Direction: Forward Position #: 4 Overlap #: 20 Alignment: ---MKGCYKCCCWAGWRCTSRGAAVS WCKAGGCCAGCCTGGYCTACAGA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C009 Combined Motif Reverse Complement Reverse Complement SVTTCTGWKGHCMAGGSDGGCCTYGW MHAGTGCTGGGATTAAAGGCBT SVTTCTGWKGHCMAGGSDGGCCHMGTGCTGGGATTAAAGGCBT Direction: Forward Position #: 22 Overlap #: 5 Alignment: SVTTCTGWKGHCMAGGSDGGCCTYGW----------------- ---------------------MHAGTGCTGGGATTAAAGGCBT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C015 Combined Motif Original Motif Original Motif SVTTCTGWKGHCMAGGSDGGCCHMGTGCTGGGATTAAAGGCBT DVAGCCWKGGCTACAVAGCK SVTTCTGWBRDCCAGGBHKRCMHAGHGCTGGGATTAAAGGCBT Direction: Forward Position #: 8 Overlap #: 20 Alignment: SVTTCTGWKGHCMAGGSDGGCCHMGTGCTGGGATTAAAGGCBT -------DVAGCCWKGGCTACAVAGCK---------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C042 Reverse Complement Original Motif ABGCCTTTAATCCCAGCHCTDYGMRDBCCTGGHKBWCAGAAVS WGTCCKRGAACYMACTCW WGKCCTDKAAYCCMMKCWCTDYGMRDBCCTGGHKBWCAGAAVS Direction: Forward Position #: 1 Overlap #: 18 Alignment: ABGCCTTTAATCCCAGCHCTDYGMRDBCCTGGHKBWCAGAAVS WGTCCKRGAACYMACTCW------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 8 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C008 C003 Reverse Complement Reverse Complement SSGGSSGGGGSSGGSS GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC GSSGGGGGSSGGGGSGGGGVMGGSHGKGSC Direction: Forward Position #: 5 Overlap #: 16 Alignment: ----SSGGSSGGGGSSGGSS---------- GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C004 Combined Motif Reverse Complement Original Motif GSCYCHSCCYVCCCCSCCCCSSCCCCCSSC SSSSSCSSSSSCCSSSSCCSCSSSSSS GSCYCBSCCYSSCCSCCCCCSCCCCCSSSCS Direction: Forward Position #: 5 Overlap #: 26 Alignment: GSCYCHSCCYVCCCCSCCCCSSCCCCCSSC- ----SSSSSCSSSSSCCSSSSCCSCSSSSSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C020 Combined Motif Original Motif Original Motif GSCYCBSCCYSSCCSCCCCCSCCCCCSSSCS BSCVCCSCCVCSCCCACS GSCYCBSSCVCCSCCCCSCCCVCCCCSSSCS Direction: Forward Position #: 7 Overlap #: 18 Alignment: GSCYCBSCCYSSCCSCCCCCSCCCCCSSSCS ------BSCVCCSCCVCSCCCACS------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C037 Original Motif Original Motif GSCYCBSSCVCCSCCCCSCCCVCCCCSSSCS SVCCGBCMCCSYCMCCVB SGCCBSCVCCVCCVCCVCSCCCVCCCCSSSCS Direction: Forward Position #: 2 Overlap #: 17 Alignment: -GSCYCBSSCVCCSCCCCSCCCVCCCCSSSCS SVCCGBCMCCSYCMCCVB-------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C140 Combined Motif Original Motif Original Motif SGCCBSCVCCVCCVCCVCSCCCVCCCCSSSCS BSCCBCVSSSBCCYHVG SGCCBSCBSCCSCVSSSBCCCVVSCCCSSSCS Direction: Forward Position #: 8 Overlap #: 17 Alignment: SGCCBSCVCCVCCVCCVCSCCCVCCCCSSSCS -------BSCCBCVSSSBCCYHVG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 9 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C009 C027 Original Motif Original Motif ABGCCTTTAATCCCAGCACTHR MRCAGRGAAACCCTGTCTYDW HRCMKDKAAWCCCWGYMYYDDA Direction: Backward Position #: 1 Overlap #: 21 Alignment: ABGCCTTTAATCCCAGCACTHR -MRCAGRGAAACCCTGTCTYDW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C007 Original Motif Original Motif HRCMKDKAAWCCCWGYMYYDDA KTTSTGAGTTCVAGGMCAGCCTS KTTSTGMVTTBAADSCCAGCCYBDDA Direction: Forward Position #: 5 Overlap #: 19 Alignment: ----HRCMKDKAAWCCCWGYMYYDDA KTTSTGAGTTCVAGGMCAGCCTS--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C015 Combined Motif Original Motif Reverse Complement KTTSTGMVTTBAADSCCAGCCYBDDA RGCTVTGTAGCCYWGGCTVD KTTSDGCDBTGWAGCCCWGSCTBDDA Direction: Forward Position #: 5 Overlap #: 20 Alignment: KTTSTGMVTTBAADSCCAGCCYBDDA ----RGCTVTGTAGCCYWGGCTVD-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C012 Reverse Complement Original Motif TDDBAGSCWGGGCTWCAVDGCDSAAY MKAGAGMKAGAGAGAGAKM HKDGAGVBAGRGMKASADVGCDSAAY Direction: Forward Position #: 1 Overlap #: 19 Alignment: TDDBAGSCWGGGCTWCAVDGCDSAAY MKAGAGMKAGAGAGAGAKM------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C005 Original Motif Reverse Complement HKDGAGVBAGRGMKASADVGCDSAAY WCKAGGCCAGCCTGGYCTACAGA WCKAGGVSAGCCWGGBCTACADAGCDSAAY Direction: Forward Position #: 5 Overlap #: 19 Alignment: ----HKDGAGVBAGRGMKASADVGCDSAAY WCKAGGCCAGCCTGGYCTACAGA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 10 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C010 C001 Reverse Complement Reverse Complement WWTTTTTTTTTTWWTTTTWWW WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW WWHTTTTWWWTTTTTTTTTTWWTTTTTWWW Direction: Forward Position #: 9 Overlap #: 21 Alignment: --------WWTTTTTTTTTTWWTTTTWWW- WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C016 Combined Motif Original Motif Reverse Complement WWHTTTTWWWTTTTTTTTTTWWTTTTTWWW WWTTYTWTYTTWDTTTWTTWH WWHTTTTWWTTTTTTTTTTTWTTTTTWWWW Direction: Forward Position #: 7 Overlap #: 21 Alignment: WWHTTTTWWWTTTTTTTTTTWWTTTTTWWW ------WWTTYTWTYTTWDTTTWTTWH--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C002 Original Motif Reverse Complement WWHTTTTWWTTTTTTTTTTTWTTTTTWWWW MKKTKKGTGTGTGTGTGTKKKTA MTDTKTKTKTKTKTKTKTKTKTWTTTWWWW Direction: Forward Position #: 1 Overlap #: 23 Alignment: WWHTTTTWWTTTTTTTTTTTWTTTTTWWWW MKKTKKGTGTGTGTGTGTKKKTA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C030 Combined Motif Original Motif Reverse Complement MTDTKTKTKTKTKTKTKTKTKTWTTTWWWW YTWTTTTTTTTYTTTTTMW MTDTKTBTDTTTTTTTTTTTTTTHTTWWWW Direction: Forward Position #: 7 Overlap #: 19 Alignment: MTDTKTKTKTKTKTKTKTKTKTWTTTWWWW ------YTWTTTTTTTTYTTTTTMW----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C012 Combined Motif Reverse Complement Original Motif WWWWAAHAAAAAAAAAAAAAADAVARADAY MKAGAGMKAGAGAGAGAKM WWWWAAMDARARMDARARAVAGADARADAY Direction: Forward Position #: 7 Overlap #: 19 Alignment: WWWWAAHAAAAAAAAAAAAAADAVARADAY ------MKAGAGMKAGAGAGAGAKM----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 11 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C011 C012 Original Motif Original Motif KMGAGAKMGAGAGAGAKM MKAGAGMKAGAGAGAGAKM KMGAGAKAGAGAGAGAKMM Direction: Backward Position #: 1 Overlap #: 18 Alignment: -KMGAGAKMGAGAGAGAKM MKAGAGMKAGAGAGAGAKM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C030 Combined Motif Original Motif Original Motif KMGAGAKAGAGAGAGAKMM WYAAAAAMAAAAAAAAWAM DHRAVADMRAVADARATMM Direction: Forward Position #: 1 Overlap #: 19 Alignment: KMGAGAKAGAGAGAGAKMM WYAAAAAMAAAAAAAAWAM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C095 Original Motif Original Motif DHRAVADMRAVADARATMM KCCAKMSTGGTSKMCAGM KCCADMVWGRBVDMVADMM Direction: Forward Position #: 1 Overlap #: 18 Alignment: DHRAVADMRAVADARATMM KCCAKMSTGGTSKMCAGM- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C034 Original Motif Original Motif KCCADMVWGRBVDMVADMM SCACTGSGGAGSMAGAGS BCVMTVSDGAGVVAGAGVM Direction: Forward Position #: 1 Overlap #: 18 Alignment: KCCADMVWGRBVDMVADMM SCACTGSGGAGSMAGAGS- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Original Motif Reverse Complement BCVMTVSDGAGVVAGAGVM GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC BCVVBVSGGRGSVRGRGVVKGGVMGGSHGKGSC Direction: Forward Position #: 4 Overlap #: 16 Alignment: BCVMTVSDGAGVVAGAGVM-------------- ---GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 12 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C012 C003 Original Motif Reverse Complement MKAGAGMKAGAGAGAGAKM GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC SCVGRGRGVKRGAVRGVVRKVGSSGGGGGS Direction: Backward Position #: 3 Overlap #: 19 Alignment: ---------MKAGAGMKAGAGAGAGAKM-- GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 13 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C013 C027 Reverse Complement Reverse Complement YCCTGGTCTACADAGTGAGTTCCAGVW WHKAGACAGGGTTTCMCTGKY TCTASABAGKGWKTYCCWGKWYCCTGG Direction: Backward Position #: 1 Overlap #: 21 Alignment: YCCTGGTCTACADAGTGAGTTCCAGVW ------WHKAGACAGGGTTTCMCTGKY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C019 Reverse Complement Original Motif CCAGGMWYCWGGKAYWCRCTBTSTAGA MWYCCCAGCACTTGGGAGGCAG MWYCCMRGCACYWGGGABDCRSTBTSTAGA Direction: Forward Position #: 4 Overlap #: 19 Alignment: ---CCAGGMWYCWGGKAYWCRCTBTSTAGA MWYCCCAGCACTTGGGAGGCAG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C132 Original Motif Original Motif MWYCCMRGCACYWGGGABDCRSTBTSTAGA WCAGRGWGAGAWCYAGGW WCADBSHVAGVWCYAGGDABDCRSTBTSTAGA Direction: Forward Position #: 3 Overlap #: 16 Alignment: --MWYCCMRGCACYWGGGABDCRSTBTSTAGA WCAGRGWGAGAWCYAGGW-------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C053 Combined Motif Reverse Complement Reverse Complement TCTASABASKGHBTHCCTMGWBCTVDSBHTGW MRCAGGMTTTCTCKGTYK TCTASAVACWGBHTTYCTCKKTCKVDSBHTGW Direction: Forward Position #: 7 Overlap #: 18 Alignment: TCTASABASKGHBTHCCTMGWBCTVDSBHTGW ------MRCAGGMTTTCTCKGTYK-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C036 Combined Motif Reverse Complement Reverse Complement WCADBSHVRGAYYGAGMAADBCWGTVTSTAGA RRCTRRRTCTCRRRCTRY WCADBSHRRVWVVRWSHMARVCTRTVTSTAGA Direction: Forward Position #: 8 Overlap #: 18 Alignment: WCADBSHVRGAYYGAGMAADBCWGTVTSTAGA -------RRCTRRRTCTCRRRCTRY------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 14 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C014 C086 Original Motif Original Motif YSGGAGGCAGAGGCMS CSGGAGKCWGMGGSASG CSGGAGKCAGAGGCMSG Direction: Forward Position #: 1 Overlap #: 16 Alignment: YSGGAGGCAGAGGCMS- CSGGAGKCWGMGGSASG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C050 Combined Motif Reverse Complement Original Motif CSYGCCTCTGYCTCCSG CBGCCKCYSCCTCYMG CCBGCCTCTGCCTCCVG Direction: Forward Position #: 2 Overlap #: 16 Alignment: CSYGCCTCTGYCTCCSG -CBGCCKCYSCCTCYMG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C083 Reverse Complement Reverse Complement CVGGAGGCAGAGGCVGG CYRGAGSMKSAGGBRG CBGGAGGCDGAGGCVGG Direction: Forward Position #: 1 Overlap #: 16 Alignment: CVGGAGGCAGAGGCVGG CYRGAGSMKSAGGBRG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C101 Reverse Complement Original Motif CCBGCCTCDGCCTCCBG YTSCCTSKSVSTCCCAR CYBSCYBBVVSYYCCDR Direction: Forward Position #: 1 Overlap #: 17 Alignment: CCBGCCTCDGCCTCCBG YTSCCTSKSVSTCCCAR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C012 Original Motif Reverse Complement CYBSCYBBVVSYYCCDR YRTCTCTCTCTRYCTCTRR YDBCYYBCBCBDYCYVDRR Direction: Forward Position #: 1 Overlap #: 17 Alignment: CYBSCYBBVVSYYCCDR-- YRTCTCTCTCTRYCTCTRR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 15 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C015 C027 Original Motif Reverse Complement DVAGCCWKGGCTACAVAGCK WHKAGACAGGGTTTCMCTGKY WHBAGMCAGGGYTWCMVWGBB Direction: Forward Position #: 2 Overlap #: 20 Alignment: -DVAGCCWKGGCTACAVAGCK WHKAGACAGGGTTTCMCTGKY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C019 Reverse Complement Reverse Complement VVCWVYGWAKCCCTGRCTBHW CTGCCTCCCAAGTGCTGGGMWR CTVCCTVCSAAGYSCTGGSHHDW Direction: Forward Position #: 3 Overlap #: 20 Alignment: --VVCWVYGWAKCCCTGRCTBHW CTGCCTCCCAAGTGCTGGGMWR- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C009 Original Motif Original Motif CTVCCTVCSAAGYSCTGGSHHDW ABGCCTTTAATCCCAGCACTHR ABGCCTDYMWBCCMAGCVCTBRSHHDW Direction: Forward Position #: 5 Overlap #: 18 Alignment: ----CTVCCTVCSAAGYSCTGGSHHDW ABGCCTTTAATCCCAGCACTHR----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C005 Reverse Complement Original Motif WDHHSMBAGBGCTRGGVWYMDAGGCBT TCTGTAGMCCAGGCTGGCCTYGW TCTGTAGMCMRGGCTGGSCTYVDAGGCBT Direction: Forward Position #: 3 Overlap #: 21 Alignment: --WDHHSMBAGBGCTRGGVWYMDAGGCBT TCTGTAGMCCAGGCTGGCCTYGW------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C007 Original Motif Original Motif TCTGTAGMCMRGGCTGGSCTYVDAGGCBT KTTSTGAGTTCVAGGMCAGCCTS KTTCTGWRKYCMAGGCYRGCCTBVDAGGCBT Direction: Forward Position #: 3 Overlap #: 21 Alignment: --TCTGTAGMCMRGGCTGGSCTYVDAGGCBT KTTSTGAGTTCVAGGMCAGCCTS-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 16 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C016 C001 Reverse Complement Reverse Complement WWTTYTWTYTTWDTTTWTTWH WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW WWHTTTTWWWTTTTWTTTTWDTTTTTTWWW Direction: Forward Position #: 9 Overlap #: 21 Alignment: --------WWTTYTWTYTTWDTTTWTTWH- WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C010 Combined Motif Original Motif Reverse Complement WWHTTTTWWWTTTTWTTTTWDTTTTTTWWW WWTTTTTTTTTTWWTTTTWWW WWHTTTTWTTTTTTTTTTTWTTTTWTWWWW Direction: Forward Position #: 7 Overlap #: 21 Alignment: WWHTTTTWWWTTTTWTTTTWDTTTTTTWWW ------WWTTTTTTTTTTWWTTTTWWW--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C002 Combined Motif Original Motif Reverse Complement WWHTTTTWTTTTTTTTTTTWTTTTWTWWWW MKKTKKGTGTGTGTGTGTKKKTA WWHTTTHTKTKTKTKTKTKTKTKTKTKTAW Direction: Forward Position #: 7 Overlap #: 23 Alignment: WWHTTTTWTTTTTTTTTTTWTTTTWTWWWW ------MKKTKKGTGTGTGTGTGTKKKTA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C030 Combined Motif Original Motif Reverse Complement WWHTTTHTKTKTKTKTKTKTKTKTKTKTAW YTWTTTTTTTTYTTTTTMW HWHTTTHTTTTTTTDTTTDTKTKTKTKTAW Direction: Forward Position #: 1 Overlap #: 19 Alignment: WWHTTTHTKTKTKTKTKTKTKTKTKTKTAW YTWTTTTTTTTYTTTTTMW----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C062 Combined Motif Reverse Complement Original Motif WTARARARAYADAAADAAAAAAAHAAAHWH WWAMAWRMAMAYWAAHWW WWAAAWAVAHAHWAAHWWAAAAAHAAAHWH Direction: Forward Position #: 1 Overlap #: 18 Alignment: WTARARARAYADAAADAAAAAAAHAAAHWH WWAMAWRMAMAYWAAHWW------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 17 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C017 C012 Original Motif Original Motif WSWGAGASWSAGAGASWS MKAGAGMKAGAGAGAGAKM HBAGAGAGAGAGAGAGABM Direction: Forward Position #: 1 Overlap #: 18 Alignment: WSWGAGASWSAGAGASWS- MKAGAGMKAGAGAGAGAKM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C006 Combined Motif Reverse Complement Reverse Complement YBTCTCTCTCTCTCTCTBH WSWGTGTGWSTGTGTGWS HSTSTSTSTSTSTSTSWSH Direction: Forward Position #: 1 Overlap #: 18 Alignment: YBTCTCTCTCTCTCTCTBH WSWGTGTGWSTGTGTGWS- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C036 Combined Motif Original Motif Reverse Complement HSTSTSTSTSTSTSTSWSH RRCTRRRTCTCRRRCTRY HSTVDSTVDVTSTSDVDCTRY Direction: Forward Position #: 4 Overlap #: 16 Alignment: HSTSTSTSTSTSTSTSWSH-- ---RRCTRRRTCTCRRRCTRY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C132 Combined Motif Reverse Complement Original Motif KKAGDVDSASAVDVASDVASH WCAGRGWGAGAWCYAGGW KKDSAVRGAGAGDHMBAGDBH Direction: Forward Position #: 3 Overlap #: 18 Alignment: KKAGDVDSASAVDVASDVASH --WCAGRGWGAGAWCYAGGW- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C002 Combined Motif Original Motif Original Motif KKDSAVRGAGAGDHMBAGDBH TAYRYACACACACACACRYAYRY KKDBABRBASASACACASABAYAYRY Direction: Forward Position #: 4 Overlap #: 18 Alignment: KKDSAVRGAGAGDHMBAGDBH----- ---TAYRYACACACACACACRYAYRY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 18 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C018 C024 Reverse Complement Reverse Complement THTTTTTTTMYTT THTTDMWTTTTWKMTTDA ATMTTTTTTTMTTDTHTT Direction: Backward Position #: 2 Overlap #: 13 Alignment: ----THTTTTTTTMYTT- THTTDMWTTTTWKMTTDA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C033 Combined Motif Reverse Complement Original Motif AAHADAAYAAAAAAAYAT WWAAWYAAAMRWAAAW AAHWWAAWHAAAAAAAAWW Direction: Forward Position #: 4 Overlap #: 15 Alignment: AAHADAAYAAAAAAAYAT- ---WWAAWYAAAMRWAAAW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C010 Combined Motif Original Motif Original Motif AAHWWAAWHAAAAAAAAWW WWWAAAAWWAAAAAAAAAAWW AAWAAAAWWAAAAAAAAAAWW Direction: Forward Position #: 1 Overlap #: 19 Alignment: AAHWWAAWHAAAAAAAAWW-- WWWAAAAWWAAAAAAAAAAWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C131 Reverse Complement Reverse Complement WWTTTTTTTTTTWWTTTTWTT WWTTHBKTTDTTWW WWTTHTTTTTTTWWTTTTWTT Direction: Forward Position #: 1 Overlap #: 14 Alignment: WWTTTTTTTTTTWWTTTTWTT WWTTHBKTTDTTWW------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C030 Combined Motif Original Motif Reverse Complement WWTTHTTTTTTTWWTTTTWTT YTWTTTTTTTTYTTTTTMW HWWTTTTTTTTTWWTTTHWTT Direction: Forward Position #: 1 Overlap #: 19 Alignment: WWTTHTTTTTTTWWTTTTWTT YTWTTTTTTTTYTTTTTMW-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 19 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C019 C013 Reverse Complement Reverse Complement CTGCCTCCCAAGTGCTGGGMWR YCCTGGTCTACADAGTGAGTTCCAGVW YCCYKGYCTMCMVAGTGMKKKSMAGVW Direction: Forward Position #: 4 Overlap #: 22 Alignment: ---CTGCCTCCCAAGTGCTGGGMWR-- YCCTGGTCTACADAGTGAGTTCCAGVW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C007 Combined Motif Reverse Complement Reverse Complement WVCTRSRRYRCACTVYGYAGKCYMGGM SAGGCTGYCCTVGAACTCASAAY WVCTRSRRYRCACTVYGYAGKCBMGGCTGYCCTVGAACTCASAAY Direction: Forward Position #: 23 Overlap #: 5 Alignment: WVCTRSRRYRCACTVYGYAGKCYMGGM------------------ ----------------------SAGGCTGYCCTVGAACTCASAAY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C003 Reverse Complement Reverse Complement KTTSTGAGTTCVAGGKCAGCCYBGYCTMCMVAGTGMKKKSMAGVW GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC GKGSCGCAGSSKGGBSKVSVDDGKGMGKKVKTTSTGAGTTCVAGGKCAGC Direction: Backward Position #: 6 Overlap #: 25 Alignment: KTTSTGAGTTCVAGGKCAGCCYBGYCTMCMVAGTGMKKKSMAGVW----- --------------------GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 20 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C020 C004 Reverse Complement Reverse Complement SGTGGGSGVGGSGGVGSB SSSSSSGSGGSSSSGGSSSSSGSSSSS SSSSSGBGGSSGSGGSGGSGSSSSSSS Direction: Backward Position #: 5 Overlap #: 18 Alignment: -----SGTGGGSGVGGSGGVGSB---- SSSSSSGSGGSSSSGGSSSSSGSSSSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Reverse Complement Original Motif SSSSSSSCSCCSCCSCSSCCVCSSSSS GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC SSSSSGSCBCCSCCBSCCCCVCCCCSSCCCCCSSC Direction: Forward Position #: 6 Overlap #: 22 Alignment: SSSSSSSCSCCSCCSCSSCCVCSSSSS-------- -----GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C037 Original Motif Original Motif SSSSSGSCBCCSCCBSCCCCVCCCCSSCCCCCSSC SVCCGBCMCCSYCMCCVB SSCCSSCVCCSBCCCCVCCCCVCCCCSSCCCCCSSC Direction: Forward Position #: 2 Overlap #: 17 Alignment: -SSSSSGSCBCCSCCBSCCCCVCCCCSSCCCCCSSC SVCCGBCMCCSYCMCCVB------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C128 Combined Motif Original Motif Original Motif SSCCSSCVCCSBCCCCVCCCCVCCCCSSCCCCCSSC SYCTSRSTGTCSYSGARS SBCYSVSBSYCSCSSHVSCCCVCCCCSSCCCCCSSC Direction: Forward Position #: 1 Overlap #: 18 Alignment: SSCCSSCVCCSBCCCCVCCCCVCCCCSSCCCCCSSC SYCTSRSTGTCSYSGARS------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C012 Combined Motif Reverse Complement Original Motif GSSGGGGGSSGGGGVGGGSVHSSGSGMSVSVSMGBS MKAGAGMKAGAGAGAGAKM GSSGGGVGVGRGVGRGRGVVAGVKVGMSVSVSMGBS Direction: Forward Position #: 7 Overlap #: 19 Alignment: GSSGGGGGSSGGGGVGGGSVHSSGSGMSVSVSMGBS ------MKAGAGMKAGAGAGAGAKM----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 21 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C021 C036 Original Motif Original Motif MKAGMVAGAKAGMK MKAGMKMGAGAKMKAGMK MKAGAGAGAKAGMKMKAG Direction: Backward Position #: 1 Overlap #: 14 Alignment: ----MKAGMVAGAKAGMK MKAGMKMGAGAKMKAGMK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C011 Original Motif Original Motif MKAGAGAGAKAGMKMKAG KMGAGAKMGAGAGAGAKM KMGAGAKAGAGAGAGAKAG Direction: Forward Position #: 2 Overlap #: 17 Alignment: -MKAGAGAGAKAGMKMKAG KMGAGAKMGAGAGAGAKM- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C012 Original Motif Original Motif KMGAGAKAGAGAGAGAKAG MKAGAGMKAGAGAGAGAKM MKMGAGAKAGAGAGAGAKMG Direction: Forward Position #: 2 Overlap #: 18 Alignment: -KMGAGAKAGAGAGAGAKAG MKAGAGMKAGAGAGAGAKM- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C108 Reverse Complement Reverse Complement CYRTCTCTCTCTYTCTCYRR MVSTWTSTCWGTBK MBRTHTSTCTSTYTCTCYRR Direction: Forward Position #: 1 Overlap #: 14 Alignment: CYRTCTCTCTCTYTCTCYRR MVSTWTSTCWGTBK------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C055 Reverse Complement Original Motif MKMGAGAKASAGASADAMBR MKAGAGMKMKAGAGMK MKAGAGMKABAGAGMKAMBR Direction: Forward Position #: 1 Overlap #: 16 Alignment: MKMGAGAKASAGASADAMBR MKAGAGMKMKAGAGMK---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 22 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C022 C140 Original Motif Original Motif BGCCYCBGSCYCCCSVS BSCCBCVSSSBCCYHVG BSCCYCVGSSBCCYVVS Direction: Forward Position #: 1 Overlap #: 17 Alignment: BGCCYCBGSCYCCCSVS BSCCBCVSSSBCCYHVG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Reverse Complement Reverse Complement SVVKGGBSSCVGKGGSB GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC SVVGGGBGGSGGBGGGGGGKGGVMGGSHGKGSC Direction: Forward Position #: 4 Overlap #: 14 Alignment: SVVKGGBSSCVGKGGSB---------------- ---GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C004 Combined Motif Original Motif Reverse Complement SVVGGGBGGSGGBGGGGGGKGGVMGGSHGKGSC SSSSSSGSGGSSSSGGSSSSSGSSSSS SSSGSGGSGGSGSGGGSGGSGGSVGGSHGKGSC Direction: Forward Position #: 1 Overlap #: 27 Alignment: SVVGGGBGGSGGBGGGGGGKGGVMGGSHGKGSC SSSSSSGSGGSSSSGGSSSSSGSSSSS------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C020 Combined Motif Original Motif Reverse Complement SSSGSGGSGGSGSGGGSGGSGGSVGGSHGKGSC SGTGGGSGVGGSGGVGSB SGBGGGSGGGGSGGVGSSGSGGSVGGSHGKGSC Direction: Forward Position #: 1 Overlap #: 18 Alignment: SSSGSGGSGGSGSGGGSGGSGGSVGGSHGKGSC SGTGGGSGVGGSGGVGSB--------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C037 Combined Motif Reverse Complement Original Motif GSCYCHSCCVSCCSCSSCVCCSCCCCSCCCBCS SVCCGBCMCCSYCMCCVB GVCCSBCVCMSCCVCCSCVCCSCCCCSCCCBCS Direction: Forward Position #: 1 Overlap #: 18 Alignment: GSCYCHSCCVSCCSCSSCVCCSCCCCSCCCBCS SVCCGBCMCCSYCMCCVB--------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 23 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C023 C004 Reverse Complement Reverse Complement SSGGSGDBGSGGSS SSSSSSGSGGSSSSGGSSSSSGSSSSS SSSGGSGGSGSGGSSSSSSSSGSGGSS Direction: Backward Position #: 2 Overlap #: 14 Alignment: ------------SSGGSGDBGSGGSS- SSSSSSGSGGSSSSGGSSSSSGSSSSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C104 Combined Motif Reverse Complement Original Motif SSCCSCSSSSSSSSCCSCSCCSCCSSS SSCCYCCCCDCCSS SSCCBCCCCVSCSSCCSCSCCSCCSSS Direction: Forward Position #: 1 Overlap #: 14 Alignment: SSCCSCSSSSSSSSCCSCSCCSCCSSS SSCCYCCCCDCCSS------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C054 Combined Motif Reverse Complement Reverse Complement SSSGGSGGSGSGGSSGSVGGGGBGGSS SSGGGGGGGHGGSS SSSGSSGGGGGGGVGGSSGGGGBGGSS Direction: Forward Position #: 5 Overlap #: 14 Alignment: SSSGGSGGSGSGGSSGSVGGGGBGGSS ----SSGGGGGGGHGGSS--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Original Motif Reverse Complement SSSGSSGGGGGGGVGGSSGGGGBGGSS GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC SSSGSGSSGGGGGSSGGGGGGGGGGVGGSHGKGSC Direction: Forward Position #: 6 Overlap #: 22 Alignment: SSSGSSGGGGGGGVGGSSGGGGBGGSS-------- -----GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C008 Combined Motif Original Motif Reverse Complement SSSGSGSSGGGGGSSGGGGGGGGGGVGGSHGKGSC SSGGSSGGGGSSGGSS SSSGSGSSSGGGGGGGGSGGGSSGGVGGSHGKGSC Direction: Forward Position #: 8 Overlap #: 16 Alignment: SSSGSGSSGGGGGSSGGGGGGGGGGVGGSHGKGSC -------SSGGSSGGGGSSGGSS------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 24 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C024 C097 Reverse Complement Reverse Complement THTTDMWTTTTWKMTTDA WVTTSWWTTTTWWSTTBW WHTTBWWTTTTWWVTTDW Direction: Backward Position #: 1 Overlap #: 18 Alignment: THTTDMWTTTTWKMTTDA WVTTSWWTTTTWWSTTBW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C001 Combined Motif Original Motif Reverse Complement WHTTBWWTTTTWWVTTDW WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW WHTTDHTTTTTWWHTTTWTTTTTWWTTTTTWWW Direction: Forward Position #: 4 Overlap #: 15 Alignment: WHTTBWWTTTTWWVTTDW--------------- ---WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C030 Combined Motif Reverse Complement Original Motif WWWAAAAAWWAAAAAWAAAHWWAAAAAHDAAHW WYAAAAAMAAAAAAAAWAM WWAAAAAAAAAAAAAAWAAHWWAAAAAHDAAHW Direction: Forward Position #: 1 Overlap #: 19 Alignment: WWWAAAAAWWAAAAAWAAAHWWAAAAAHDAAHW WYAAAAAMAAAAAAAAWAM-------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C032 Combined Motif Reverse Complement Reverse Complement WHTTDHTTTTTWWHTTWTTTTTTTTTTTTTTWW KWYTWKWYTTTDMWTTWH WHTTDHTTTTTWKHYTTTTHWTTWWTTTTTTWW Direction: Forward Position #: 8 Overlap #: 18 Alignment: WHTTDHTTTTTWWHTTWTTTTTTTTTTTTTTWW -------KWYTWKWYTTTDMWTTWH-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C010 Combined Motif Original Motif Reverse Complement WHTTDHTTTTTWKHYTTTTHWTTWWTTTTTTWW WWTTTTTTTTTTWWTTTTWWW WHTTDHWTTTTTTTTTTTWWTTTTWWWTTTTWW Direction: Forward Position #: 7 Overlap #: 21 Alignment: WHTTDHTTTTTWKHYTTTTHWTTWWTTTTTTWW ------WWTTTTTTTTTTWWTTTTWWW------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 25 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C025 C078 Original Motif Original Motif KMGAKAGAGMGAKM YRGAYAGAGRGAYR KMGAKAGAGMGAKM Direction: Backward Position #: 1 Overlap #: 14 Alignment: KMGAKAGAGMGAKM YRGAYAGAGRGAYR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C012 Combined Motif Reverse Complement Reverse Complement YRTCYCTCTRTCYR YRTCTCTCTCTRYCTCTRR YRTVTCTCTMTCTRYCTCTRR Direction: Forward Position #: 3 Overlap #: 12 Alignment: YRTCYCTCTRTCYR------- --YRTCTCTCTCTRYCTCTRR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C011 Reverse Complement Original Motif MKAGAGMKAGARAGAGAVAKM KMGAGAKMGAGAGAGAKM KMGAGAGAGAGAGAGAKAGAVAKM Direction: Forward Position #: 4 Overlap #: 15 Alignment: ---MKAGAGMKAGARAGAGAVAKM KMGAGAKMGAGAGAGAKM------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C026 Original Motif Original Motif KMGAGAGAGAGAGAGAKAGAVAKM KMGAGAKMKMGAGAKM KMGAGAKMGMGAGAGAKAGAVAKM Direction: Forward Position #: 1 Overlap #: 16 Alignment: KMGAGAGAGAGAGAGAKAGAVAKM KMGAGAKMKMGAGAKM-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C070 Combined Motif Original Motif Original Motif KMGAGAKMGMGAGAGAKAGAVAKM GVGABAGAVAGASVK KMGAGVGMBAGAGAGABMGAVAKM Direction: Forward Position #: 5 Overlap #: 15 Alignment: KMGAGAKMGMGAGAGAKAGAVAKM ----GVGABAGAVAGASVK----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 26 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C026 C011 Original Motif Original Motif KMGAGAKMKMGAGAKM KMGAGAKMGAGAGAGAKM KMGAGAKMGAGAGAGAKM Direction: Forward Position #: 1 Overlap #: 16 Alignment: KMGAGAKMKMGAGAKM-- KMGAGAKMGAGAGAGAKM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C012 Reverse Complement Reverse Complement RRTCTCTCTCRRTCTCRR YRTCTCTCTCTRYCTCTRR DRTCTCTCTCDRTCTCDRR Direction: Forward Position #: 1 Overlap #: 18 Alignment: RRTCTCTCTCRRTCTCRR- YRTCTCTCTCTRYCTCTRR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C017 Combined Motif Reverse Complement Original Motif MKHGAGAKDGAGAGAGAKH WSWGAGASWSAGAGASWS HBWGAGAGWGAGAGAGABH Direction: Forward Position #: 1 Overlap #: 18 Alignment: MKHGAGAKDGAGAGAGAKH WSWGAGASWSAGAGASWS- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C036 Combined Motif Original Motif Original Motif HBWGAGAGWGAGAGAGABH MKAGMKMGAGAKMKAGMK MKAGAGMGAGAGAKAGMKH Direction: Forward Position #: 1 Overlap #: 18 Alignment: HBWGAGAGWGAGAGAGABH MKAGMKMGAGAKMKAGMK- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C129 Original Motif Original Motif MKAGAGMGAGAGAKAGMKH KKGCTAYRYRGAGAMM KDGMKABRBAGAGAVAGMKH Direction: Forward Position #: 2 Overlap #: 15 Alignment: -MKAGAGMGAGAGAKAGMKH KKGCTAYRYRGAGAMM---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 27 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C027 C005 Original Motif Reverse Complement MRCAGRGAAACCCTGTCTYDW WCKAGGCCAGCCTGGYCTACAGA WCDASRVVRRMMYSSTSTMYHDA Direction: Forward Position #: 3 Overlap #: 21 Alignment: --MRCAGRGAAACCCTGTCTYDW WCKAGGCCAGCCTGGYCTACAGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C013 Combined Motif Original Motif Original Motif WCDASRVVRRMMYSSTSTMYHDA WVCTGGAACTCACTHTGTAGACCAGGM WCDVCDGGAACHCVCTSTSTAGACCAGGM Direction: Forward Position #: 3 Overlap #: 21 Alignment: WCDASRVVRRMMYSSTSTMYHDA------ --WVCTGGAACTCACTHTGTAGACCAGGM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C002 Reverse Complement Reverse Complement YCCTGGTCTASASAGBGHGTTCCDGBDGW MKKTKKGTGTGTGTGTGTKKKTA KKTAHBKWBDGWGTGTGTKYSDGYCCTGGTCTA Direction: Backward Position #: 5 Overlap #: 19 Alignment: YCCTGGTCTASASAGBGHGTTCCDGBDGW---- ----------MKKTKKGTGTGTGTGTGTKKKTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 28 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C028 C012 Original Motif Original Motif BVGASSCASAGVSABV MKAGAGMKAGAGAGAGAKM KMBVGAGVBAGAGMSAGVM Direction: Backward Position #: 3 Overlap #: 16 Alignment: -BVGASSCASAGVSABV-- MKAGAGMKAGAGAGAGAKM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C041 Combined Motif Reverse Complement Reverse Complement RBCTSYCTCTBVCTCBVYR SSTGCCTYRGCCTCSG RBCBSYSYCTYRSYCTCBR Direction: Forward Position #: 4 Overlap #: 16 Alignment: RBCTSYCTCTBVCTCBVYR ---SSTGCCTYRGCCTCSG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C044 Combined Motif Original Motif Reverse Complement RBCBSYSYCTYRSYCTCBR BATCSVMCTGCCTCTVB RBCBVTCBSHCDSYCTCTRB Direction: Forward Position #: 4 Overlap #: 16 Alignment: RBCBSYSYCTYRSYCTCBR- ---BATCSVMCTGCCTCTVB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C011 Reverse Complement Original Motif BMAGAGKSDGHSBGABVGVM KMGAGAKMGAGAGAGAKM KVSAGAGVSAGAGVGAKMGVM Direction: Forward Position #: 2 Overlap #: 17 Alignment: -BMAGAGKSDGHSBGABVGVM KMGAGAKMGAGAGAGAKM--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C085 Original Motif Reverse Complement KVSAGAGVSAGAGVGAKMGVM SKCSVHMTCTDBSKCSV SKCBVVMKMKVBVGMSVGAKMGVM Direction: Forward Position #: 4 Overlap #: 14 Alignment: ---KVSAGAGVSAGAGVGAKMGVM SKCSVHMTCTDBSKCSV------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 29 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C029 C032 Reverse Complement Reverse Complement TTWWWTTTTWWWTT KWYTWKWYTTTDMWTTWH WHTTWDWTTTTWHWTTKW Direction: Backward Position #: 3 Overlap #: 14 Alignment: --TTWWWTTTTWWWTT-- KWYTWKWYTTTDMWTTWH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C097 Original Motif Reverse Complement WHTTWDWTTTTWHWTTKW WVTTSWWTTTTWWSTTBW WHTTDWWTTTTWWDTTDW Direction: Forward Position #: 1 Overlap #: 18 Alignment: WHTTWDWTTTTWHWTTKW WVTTSWWTTTTWWSTTBW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C063 Combined Motif Original Motif Reverse Complement WHTTDWWTTTTWWDTTDW TTHRWTTTTWYRTTY WHTTDHWTTTTWWHTTKW Direction: Forward Position #: 4 Overlap #: 15 Alignment: WHTTDWWTTTTWWDTTDW ---TTHRWTTTTWYRTTY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C079 Combined Motif Original Motif Reverse Complement WHTTDHWTTTTWWHTTKW WKTRTWTTTTWRTTTDT WHTTTTRTTTTTTWDTTTDT Direction: Forward Position #: 4 Overlap #: 15 Alignment: WHTTDHWTTTTWWHTTKW-- ---WKTRTWTTTTWRTTTDT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C001 Combined Motif Reverse Complement Original Motif ADAAADWAAAAAAKAAAAHW WWWAAAAAWWAAAAAWAAAAAWWAAAAHWW ADAAWWWAAAAAAWAAAAHWAAAAAWWAAAAHWW Direction: Forward Position #: 5 Overlap #: 16 Alignment: ADAAADWAAAAAAKAAAAHW-------------- ----WWWAAAAAWWAAAAAWAAAAAWWAAAAHWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 30 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C030 C001 Original Motif Original Motif WYAAAAAMAAAAAAAAWAM WWWAAAAAWWAAAAAWAAAAAWWAAAAHWW WWWAAAAAWWWAAAAAAAAAAAAAAWAHWW Direction: Forward Position #: 10 Overlap #: 19 Alignment: ---------WYAAAAAMAAAAAAAAWAM-- WWWAAAAAWWAAAAAWAAAAAWWAAAAHWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C010 Combined Motif Original Motif Original Motif WWWAAAAAWWWAAAAAAAAAAAAAAWAHWW WWWAAAAWWAAAAAAAAAAWW WWWAAAWWWAAAAWWAAAAAAAAAAWWHWW Direction: Forward Position #: 7 Overlap #: 21 Alignment: WWWAAAAAWWWAAAAAAAAAAAAAAWAHWW ------WWWAAAAWWAAAAAAAAAAWW--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C016 Combined Motif Original Motif Original Motif WWWAAAWWWAAAAWWAAAAAAAAAAWWHWW HWAAWAAAHWAAMAWAMAAWW WWWAAAWWAAHAAAHWAAMAAAMAAWWHWW Direction: Forward Position #: 7 Overlap #: 21 Alignment: WWWAAAWWWAAAAWWAAAAAAAAAAWWHWW ------HWAAWAAAHWAAMAWAMAAWW--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C012 Original Motif Original Motif WWWAAAWWAAHAAAHWAAMAAAMAAWWHWW MKAGAGMKAGAGAGAGAKM HDARARHDARARADARADMAAAMAAWWHWW Direction: Forward Position #: 1 Overlap #: 19 Alignment: WWWAAAWWAAHAAAHWAAMAAAMAAWWHWW MKAGAGMKAGAGAGAGAKM----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C002 Combined Motif Reverse Complement Reverse Complement WWHWWTTYTTTYDTMTDTKTMTDHMTKTDH MKKTKKGTGTGTGTGTGTKKKTA MTBTKTKTKTKTKTVTKTKTBTAHMTKTDH Direction: Forward Position #: 1 Overlap #: 23 Alignment: WWHWWTTYTTTYDTMTDTKTMTDHMTKTDH MKKTKKGTGTGTGTGTGTKKKTA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 31 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C031 C139 Original Motif Original Motif WHAAAMRWWYAAAMAWW WWMAAABWWWVAAAAWW WWAAAAVWWWVAAAAWW Direction: Backward Position #: 1 Overlap #: 17 Alignment: WHAAAMRWWYAAAMAWW WWMAAABWWWVAAAAWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C001 Combined Motif Reverse Complement Reverse Complement WWTTTTBWWWBTTTTWW WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW WWTTTTTWTTDTTTTTTWTTTTTWWTTTTTWWW Direction: Forward Position #: 4 Overlap #: 14 Alignment: WWTTTTBWWWBTTTTWW---------------- ---WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C069 Reverse Complement Original Motif WWWAAAAAWWAAAAAWAAAAAADAAWAAAAAWW AHAAMAAYWDYAAMAAHD WWAAAAAWWWWAAAAAWAAAAADAAWAAAAAWW Direction: Forward Position #: 1 Overlap #: 18 Alignment: WWWAAAAAWWAAAAAWAAAAAADAAWAAAAAWW AHAAMAAYWDYAAMAAHD--------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C010 Original Motif Original Motif WWAAAAAWWWWAAAAAWAAAAADAAWAAAAAWW WWWAAAAWWAAAAAAAAAAWW WWWAAAAWWAAAAAAAAAAAAAADAAWAAAAAWW Direction: Forward Position #: 2 Overlap #: 20 Alignment: -WWAAAAAWWWWAAAAAWAAAAADAAWAAAAAWW WWWAAAAWWAAAAAAAAAAWW------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C016 Combined Motif Original Motif Original Motif WWWAAAAWWAAAAAAAAAAAAAADAAWAAAAAWW HWAAWAAAHWAAMAWAMAAWW WWAAAAAAHWAAAAAAMAAAWAADAAWAAAAAWW Direction: Forward Position #: 1 Overlap #: 21 Alignment: WWWAAAAWWAAAAAAAAAAAAAADAAWAAAAAWW HWAAWAAAHWAAMAWAMAAWW------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 32 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C032 C001 Reverse Complement Reverse Complement KWYTWKWYTTTDMWTTWH WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW WWHTTTTWWWTTTTWTTTTWWWTTTWTWWW Direction: Forward Position #: 9 Overlap #: 18 Alignment: --------KWYTWKWYTTTDMWTTWH---- WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C024 Combined Motif Original Motif Reverse Complement WWHTTTTWWWTTTTWTTTTWWWTTTWTWWW THTTDMWTTTTWKMTTDA WWHTTTTWTTTWWTTTTTTHWTTWTWTWWW Direction: Forward Position #: 7 Overlap #: 18 Alignment: WWHTTTTWWWTTTTWTTTTWWWTTTWTWWW ------THTTDMWTTTTWKMTTDA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C016 Combined Motif Reverse Complement Original Motif WWWAWAWAAWHAAAAAAWWAAAWAAAAHWW HWAAWAAAHWAAMAWAMAAWW WWWAWAWWAAHAAAMWAAMAWAHAAAAHWW Direction: Forward Position #: 7 Overlap #: 21 Alignment: WWWAWAWAAWHAAAAAAWWAAAWAAAAHWW ------HWAAWAAAHWAAMAWAMAAWW--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C010 Combined Motif Original Motif Original Motif WWWAWAWWAAHAAAMWAAMAWAHAAAAHWW WWWAAAAWWAAAAAAAAAAWW WWWAWAWWAAAAAWWAAAAAAAHAAWWHWW Direction: Forward Position #: 7 Overlap #: 21 Alignment: WWWAWAWWAAHAAAMWAAMAWAHAAAAHWW ------WWWAAAAWWAAAAAAAAAAWW--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C030 Combined Motif Original Motif Original Motif WWWAWAWWAAAAAWWAAAAAAAHAAWWHWW WYAAAAAMAAAAAAAAWAM WWWAWAWWAAAAAAAAAAAAAAWAAWWHWW Direction: Forward Position #: 7 Overlap #: 19 Alignment: WWWAWAWWAAAAAWWAAAAAAAHAAWWHWW ------WYAAAAAMAAAAAAAAWAM----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 33 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C033 C016 Original Motif Original Motif WWAAWYAAAMRWAAAW HWAAWAAAHWAAMAWAMAAWW WWAWAAWYAAAMAWAMAAHWA Direction: Backward Position #: 3 Overlap #: 16 Alignment: ---WWAAWYAAAMRWAAAW-- HWAAWAAAHWAAMAWAMAAWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C010 Original Motif Original Motif WWAWAAWYAAAMAWAMAAHWA WWWAAAAWWAAAAAAAAAAWW WWWAAAAWHAAAMAAAMAAWWA Direction: Forward Position #: 2 Overlap #: 20 Alignment: -WWAWAAWYAAAMAWAMAAHWA WWWAAAAWWAAAAAAAAAAWW- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C098 Combined Motif Original Motif Original Motif WWWAAAAWHAAAMAAAMAAWWA AAAAWWAMAAWWAAWH WWWAAAAAWAAAAAWAAAWWWA Direction: Forward Position #: 5 Overlap #: 16 Alignment: WWWAAAAWHAAAMAAAMAAWWA ----AAAAWWAMAAWWAAWH-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C030 Combined Motif Reverse Complement Reverse Complement TWWWTTTWTTTTTWTTTTTWWW YTWTTTTTTTTYTTTTTMW TWWTTTTWTTTTTWTTTHWWWW Direction: Forward Position #: 1 Overlap #: 19 Alignment: TWWWTTTWTTTTTWTTTTTWWW YTWTTTTTTTTYTTTTTMW--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C001 Combined Motif Reverse Complement Original Motif WWWWHAAAWAAAAAWAAAAWWA WWWAAAAAWWAAAAAWAAAAAWWAAAAHWW WWWWWAAAAAAAAAWAAAAWAAAAAWWAAAAHWW Direction: Forward Position #: 5 Overlap #: 18 Alignment: WWWWHAAAWAAAAAWAAAAWWA------------ ----WWWAAAAAWWAAAAAWAAAAAWWAAAAHWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 34 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C034 C004 Original Motif Reverse Complement SCACTGSGGAGSMAGAGS SSSSSSGSGGSSSSGGSSSSSGSSSSS SSSVSBSSGGRGSSRGVGSSSSSSSGS Direction: Backward Position #: 2 Overlap #: 18 Alignment: --------SCACTGSGGAGSMAGAGS- SSSSSSGSGGSSSSGGSSSSSGSSSSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Original Motif Reverse Complement SSSVSBSSGGRGSSRGVGSSSSSSSGS GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC GSSVSGGGGSGGGGVGDGGSVGGSVGBGSC Direction: Forward Position #: 1 Overlap #: 27 Alignment: SSSVSBSSGGRGSSRGVGSSSSSSSGS--- GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C013 Combined Motif Reverse Complement Reverse Complement GSCBCVSCCVSCCHCVCCCCSCCCCSVSSC YCCTGGTCTACADAGTGAGTTCCAGVW GSCBCVSCCVSCCHCVCCCCSCCCCYGGYCTACADAGTGAGTTCCAGVW Direction: Forward Position #: 23 Overlap #: 8 Alignment: GSCBCVSCCVSCCHCVCCCCSCCCCSVSSC------------------- ----------------------YCCTGGTCTACADAGTGAGTTCCAGVW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C011 Combined Motif Reverse Complement Reverse Complement WVCTGGAACTCACTHTGTAGMCCMGGGGSGGGGVGDGGSVGGSVGBGSC RRTCTCTCTCRRTCTCRR WVCTGGAWCTCWCTCDGTMKCVVMGGGGSGGGGVGDGGSVGGSVGBGSC Direction: Forward Position #: 6 Overlap #: 18 Alignment: WVCTGGAACTCACTHTGTAGMCCMGGGGSGGGGVGDGGSVGGSVGBGSC -----RRTCTCTCTCRRTCTCRR-------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C012 Combined Motif Reverse Complement Reverse Complement GSCBCVSCCVSCCHCVCCCCSCCCCYBVGYYACDGAGWGAGWTCCAGVW YRTCTCTCTCTRYCTCTRR GSCBCVBCYVBCYCYVYCYCBVVCCYBVGYYACDGAGWGAGWTCCAGVW Direction: Forward Position #: 5 Overlap #: 19 Alignment: GSCBCVSCCVSCCHCVCCCCSCCCCYBVGYYACDGAGWGAGWTCCAGVW ----YRTCTCTCTCTRYCTCTRR-------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 35 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C035 C073 Reverse Complement Original Motif WWTTTMYAGACRKGGTWW YMWGSMYAGCCRKSKCTR HMTKKMYAGMCRKGGYTD Direction: Forward Position #: 1 Overlap #: 18 Alignment: WWTTTMYAGACRKGGTWW YMWGSMYAGCCRKSKCTR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C015 Reverse Complement Original Motif DAKCCYKGYCTMRRYAYH DVAGCCWKGGCTACAVAGCK DHAGCCHKGBCTASABABHK Direction: Forward Position #: 2 Overlap #: 18 Alignment: -DAKCCYKGYCTMRRYAYH- DVAGCCWKGGCTACAVAGCK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C062 Combined Motif Reverse Complement Reverse Complement RDBTBTSTAGVCYDGGCTHD WWDTTWMTRTRKWTYTWW RDHWDTBWAKRYBKDKYTDW Direction: Forward Position #: 3 Overlap #: 18 Alignment: RDBTBTSTAGVCYDGGCTHD --WWDTTWMTRTRKWTYTWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C099 Combined Motif Original Motif Reverse Complement RDHWDTBWAKRYBKDKYTDW RKTCCRGAGTGCYGGGKR RDHWDTBWAKRYBDKTCYDDAGTGCYGGGKR Direction: Forward Position #: 14 Overlap #: 7 Alignment: RDHWDTBWAKRYBKDKYTDW----------- -------------RKTCCRGAGTGCYGGGKR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C012 Combined Motif Original Motif Original Motif RDHWDTBWAKRYBDKTCYDDAGTGCYGGGKR MKAGAGMKAGAGAGAGAKM RDHWDTHTAGRBVKRKMBAKAGWGMYGGGKR Direction: Forward Position #: 7 Overlap #: 19 Alignment: RDHWDTBWAKRYBDKTCYDDAGTGCYGGGKR ------MKAGAGMKAGAGAGAGAKM------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 36 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C036 C012 Original Motif Original Motif MKAGMKMGAGAKMKAGMK MKAGAGMKAGAGAGAGAKM MMKAGAGMGAGAGMKAGMK Direction: Backward Position #: 2 Overlap #: 18 Alignment: MKAGMKMGAGAKMKAGMK- MKAGAGMKAGAGAGAGAKM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C132 Reverse Complement Reverse Complement RYCTYYCTCTCYCTCTRRY WCCTKGWTCTCWCMCTGW DYCTBBHTCTCHCHCTGDY Direction: Forward Position #: 1 Overlap #: 18 Alignment: RYCTYYCTCTCYCTCTRRY WCCTKGWTCTCWCMCTGW- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C017 Original Motif Reverse Complement DYCTBBHTCTCHCHCTGDY SWSTCTCTSWSTCTCWSW VHCTCTCTCTCTCTCTSWY Direction: Forward Position #: 1 Overlap #: 18 Alignment: DYCTBBHTCTCHCHCTGDY SWSTCTCTSWSTCTCWSW- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C013 Original Motif Original Motif VHCTCTCTCTCTCTCTSWY WVCTGGAACTCACTHTGTAGACCAGGM DHCTSKMWCTCWCTCTGTHGACCAGGM Direction: Forward Position #: 1 Overlap #: 19 Alignment: VHCTCTCTCTCTCTCTSWY-------- WVCTGGAACTCACTHTGTAGACCAGGM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C093 Original Motif Original Motif DHCTSKMWCTCWCTCTGTHGACCAGGM AKCCASMBSCCKSTGCMT ABCYVSMDSYCDCTSYVTHGACCAGGM Direction: Forward Position #: 1 Overlap #: 18 Alignment: DHCTSKMWCTCWCTCTGTHGACCAGGM AKCCASMBSCCKSTGCMT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 37 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C037 C003 Original Motif Original Motif SVCCGBCMCCSYCMCCVB GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC GSCYCHSCCYBBCCVBCCCCSSCCCCVSSC Direction: Forward Position #: 11 Overlap #: 18 Alignment: ----------SVCCGBCMCCSYCMCCVB-- GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C004 Combined Motif Original Motif Original Motif GSCYCHSCCYBBCCVBCCCCSSCCCCVSSC SSSSSCSSSSSCCSSSSCCSCSSSSSS GSCCCBSSCYSCCSSSCCCCSSCCCCSSSC Direction: Forward Position #: 1 Overlap #: 27 Alignment: GSCYCHSCCYBBCCVBCCCCSSCCCCVSSC SSSSSCSSSSSCCSSSSCCSCSSSSSS--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C020 Combined Motif Reverse Complement Reverse Complement GSSSGGGGSSGGGGSSSGGSKGSSBGGGSC SGTGGGSGVGGSGGVGSB GSSSBGGGSGGGGSGGVGSSKGSSBGGGSC Direction: Forward Position #: 3 Overlap #: 18 Alignment: GSSSGGGGSSGGGGSSSGGSKGSSBGGGSC --SGTGGGSGVGGSGGVGSB---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C093 Combined Motif Reverse Complement Original Motif GSCCCBSSCYSSCVCCSCCCCSCCCBSSSC AKCCASMBSCCKSTGCMT GSMBCCVSCBSCCBCBSCCYCSCCCBSSSC Direction: Forward Position #: 3 Overlap #: 18 Alignment: GSCCCBSSCYSSCVCCSCCCCSCCCBSSSC --AKCCASMBSCCKSTGCMT---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C005 Combined Motif Original Motif Reverse Complement GSMBCCVSCBSCCBCBSCCYCSCCCBSSSC WCKAGGCCAGCCTGGYCTACAGA GSMBCCVSCBSCCBCBSCCYCSHCSHSSCCAGCCTGGYCTACAGA Direction: Forward Position #: 23 Overlap #: 8 Alignment: GSMBCCVSCBSCCBCBSCCYCSCCCBSSSC--------------- ----------------------WCKAGGCCAGCCTGGYCTACAGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 38 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C038 C012 Reverse Complement Original Motif AKAGGCAGSDGGATKKK MKAGAGMKAGAGAGAGAKM KMAKAGRSAGVGRGAKDKD Direction: Backward Position #: 3 Overlap #: 17 Alignment: AKAGGCAGSDGGATKKK-- MKAGAGMKAGAGAGAGAKM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C027 Reverse Complement Original Motif DYDRTCMCBCTSMCTYTYR MRCAGRGAAACCCTGTCTYDW MRCABDGWMACCCTGHCTYDHR Direction: Forward Position #: 4 Overlap #: 18 Alignment: ---DYDRTCMCBCTSMCTYTYR MRCAGRGAAACCCTGTCTYDW- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Original Motif Original Motif MRCABDGWMACCCTGHCTYDHR GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC MRCAGVVHCHCCCTGYCYYBYVCCSSCCCCCSSC Direction: Forward Position #: 5 Overlap #: 18 Alignment: MRCABDGWMACCCTGHCTYDHR------------ ----GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C005 Original Motif Original Motif MRCAGVVHCHCCCTGYCYYBYVCCSSCCCCCSSC TCTGTAGMCCAGGCTGGCCTYGW THDSWRGVCCASSCTGBCYYBBHCCSSCCCCCSSC Direction: Forward Position #: 2 Overlap #: 22 Alignment: -MRCAGVVHCHCCCTGYCYYBYVCCSSCCCCCSSC TCTGTAGMCCAGGCTGGCCTYGW------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C022 Combined Motif Original Motif Original Motif THDSWRGVCCASSCTGBCYYBBHCCSSCCCCCSSC BGCCYCBGSCYCCCSVS THDSWDGHCCMBGCYBCCCBHSHCCSSCCCCCSSC Direction: Forward Position #: 6 Overlap #: 17 Alignment: THDSWRGVCCASSCTGBCYYBBHCCSSCCCCCSSC -----BGCCYCBGSCYCCCSVS------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 39 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C039 C124 Original Motif Reverse Complement SMAGRSCAGSSYGGBS WSGASKSCAGCSMSGTSW WSVAGKSCAGCSMGGBSW Direction: Forward Position #: 2 Overlap #: 16 Alignment: -SMAGRSCAGSSYGGBS- WSGASKSCAGCSMSGTSW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C126 Reverse Complement Reverse Complement WSVCCRSGCTGSYCTVSW SMCCAGSYYSGMCWBS DVMCMGSBCKGSCHTSSW Direction: Forward Position #: 1 Overlap #: 16 Alignment: WSVCCRSGCTGSYCTVSW SMCCAGSYYSGMCWBS-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C005 Combined Motif Reverse Complement Original Motif WSSADGSCRGBSCYGRVD TCTGTAGMCCAGGCTGGCCTYGW WSSHBKGYAGVCCHGGCTGGCCTYGW Direction: Forward Position #: 4 Overlap #: 15 Alignment: WSSADGSCRGBSCYGRVD-------- ---TCTGTAGMCCAGGCTGGCCTYGW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C073 Original Motif Reverse Complement WSSHBKGYAGVCCHGGCTGGCCTYGW KAGYSYKGGCTKRSCWYK KADBSHBGGCWGVSCWBGCTGGCCTYGW Direction: Forward Position #: 3 Overlap #: 16 Alignment: --WSSHBKGYAGVCCHGGCTGGCCTYGW KAGYSYKGGCTKRSCWYK---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C008 Combined Motif Reverse Complement Original Motif WCKAGGCCAGCBWGSVCWGCCVDSBHTR SSCCSSCCCCSSCCSS WCKAGGCCVSCCHSSVCCGSCVDSBHTR Direction: Forward Position #: 5 Overlap #: 16 Alignment: WCKAGGCCAGCBWGSVCWGCCVDSBHTR ----SSCCSSCCCCSSCCSS-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 40 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C040 C007 Original Motif Original Motif RSTGASYTCMARSYCAGY KTTSTGAGTTCVAGGMCAGCCTS KTDSTGAGTTCMAGGHCAGCCTS Direction: Forward Position #: 3 Overlap #: 18 Alignment: --RSTGASYTCMARSYCAGY--- KTTSTGAGTTCVAGGMCAGCCTS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C095 Combined Motif Reverse Complement Original Motif SAGGCTGDCCTYGAACTCASDAY KCCAKMSTGGTSKMCAGM SAGKCYRKCCTGGWVBHCAGHAY Direction: Forward Position #: 4 Overlap #: 18 Alignment: SAGGCTGDCCTYGAACTCASDAY ---KCCAKMSTGGTSKMCAGM-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C020 Combined Motif Original Motif Original Motif SAGKCYRKCCTGGWVBHCAGHAY BSCVCCSCCVCSCCCACS SAGKCCRBCSYSSCSSCCASVAY Direction: Forward Position #: 4 Overlap #: 18 Alignment: SAGKCYRKCCTGGWVBHCAGHAY ---BSCVCCSCCVCSCCCACS-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C037 Reverse Complement Reverse Complement KTVSTGGSSGSSKSGBKGGYCTS BVGGYGKSGGYGBCGGVS KHGGTGKSGGBGKSGGBSGYCTS Direction: Forward Position #: 1 Overlap #: 18 Alignment: KTVSTGGSSGSSKSGBKGGYCTS BVGGYGKSGGYGBCGGVS----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C003 Original Motif Reverse Complement KHGGTGKSGGBGKSGGBSGYCTS GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC GBGGKGGGGGBGGGGGBGGBCKSSHGKGSC Direction: Forward Position #: 1 Overlap #: 23 Alignment: KHGGTGKSGGBGKSGGBSGYCTS------- GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 41 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C041 C086 Original Motif Original Motif CSGAGGCMKAGGCASS CSGGAGKCWGMGGSASG SGGAGGCHGAGGCASGC Direction: Backward Position #: 1 Overlap #: 16 Alignment: -CSGAGGCMKAGGCASS CSGGAGKCWGMGGSASG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C028 Original Motif Original Motif SGGAGGCHGAGGCASGC BVGASSCASAGVSABV SSGAGBCAGAGGCASVC Direction: Forward Position #: 1 Overlap #: 16 Alignment: SGGAGGCHGAGGCASGC BVGASSCASAGVSABV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C085 Combined Motif Original Motif Original Motif SSGAGBCAGAGGCASVC VSGRSBHAGARDVSGRS SSGASGVVGMRGVRBVCGRS Direction: Forward Position #: 4 Overlap #: 14 Alignment: SSGAGBCAGAGGCASVC--- ---VSGRSBHAGARDVSGRS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C004 Reverse Complement Original Motif SKCGVBKBCMYCBVCSTCSS SSSSSCSSSSSCCSSSSCCSCSSSSSS SBCSSCBBCCBCCSCSBCCSCSSSSSS Direction: Forward Position #: 1 Overlap #: 20 Alignment: SKCGVBKBCMYCBVCSTCSS------- SSSSSCSSSSSCCSSSSCCSCSSSSSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C003 Original Motif Original Motif SBCSSCBBCCBCCSCSBCCSCSSSSSS GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC GSCYCBBCCBVYCCCBCCCCSSCCCCSSSCSS Direction: Forward Position #: 6 Overlap #: 25 Alignment: -----SBCSSCBBCCBCCSCSBCCSCSSSSSS GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 42 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C042 C007 Reverse Complement Original Motif WGAGTRMGTTCKRGGACW KTTSTGAGTTCVAGGMCAGCCTS KTTSTDRRKTVMRKKCBAGSMHD Direction: Forward Position #: 6 Overlap #: 18 Alignment: -----WGAGTRMGTTCKRGGACW KTTSTGAGTTCVAGGMCAGCCTS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C124 Combined Motif Reverse Complement Original Motif HDRSCTBGYYMRVAYMKHASAAY WSACSRSGCTGSYSTCSW DBRCCDSGCTVVBVTCBHASAAY Direction: Forward Position #: 1 Overlap #: 18 Alignment: HDRSCTBGYYMRVAYMKHASAAY WSACSRSGCTGSYSTCSW----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C053 Reverse Complement Reverse Complement KTTSTHBGABBVVAGCSHGGKBD MRCAGGMTTTCTCKGTYK MDBAKGMBWKCTCKGTHDKTTST Direction: Backward Position #: 1 Overlap #: 18 Alignment: KTTSTHBGABBVVAGCSHGGKBD -----MRCAGGMTTTCTCKGTYK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 43 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C043 C152 Reverse Complement Reverse Complement WATTMTTTTTTWTTWW YWTKYWTKTKWYKKWR HWTKYWTTTTWYTTWD Direction: Backward Position #: 1 Overlap #: 16 Alignment: WATTMTTTTTTWTTWW YWTKYWTKTKWYKKWR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C001 Combined Motif Original Motif Reverse Complement HWTKYWTTTTWYTTWD WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW HWTDHHTTTTWWTTTTTWTTTTTWWTTTTTWWW Direction: Forward Position #: 4 Overlap #: 13 Alignment: HWTKYWTTTTWYTTWD----------------- ---WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C098 Combined Motif Original Motif Reverse Complement HWTDHHTTTTWWTTTTTWTTTTTWWTTTTTWWW HWTTWWTTYTWWTTTT HWTDHHWTTTWWTTTTTWTTTTTWWTTTTTWWW Direction: Forward Position #: 7 Overlap #: 16 Alignment: HWTDHHTTTTWWTTTTTWTTTTTWWTTTTTWWW ------HWTTWWTTYTWWTTTT----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C057 Combined Motif Reverse Complement Original Motif WWWAAAAAWWAAAAAWAAAAAWWAAAWHHDAWH WRMARYAAMARYAAMAWH WWWAAAAAAAAAWAAAAAHAAMAAAAWHHDAWH Direction: Forward Position #: 8 Overlap #: 18 Alignment: WWWAAAAAWWAAAAAWAAAAAWWAAAWHHDAWH -------WRMARYAAMARYAAMAWH-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C016 Original Motif Original Motif WWWAAAAAAAAAWAAAAAHAAMAAAAWHHDAWH HWAAWAAAHWAAMAWAMAAWW HWAAAAAAHWAAAAAAMAAHAAMAAAAWHHDAWH Direction: Forward Position #: 2 Overlap #: 20 Alignment: -WWWAAAAAAAAAWAAAAAHAAMAAAAWHHDAWH HWAAWAAAHWAAMAWAMAAWW------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 44 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C044 C012 Reverse Complement Reverse Complement BATCSVMCTGCCTCTVB YRTCTCTCTCTRYCTCTRR YMTCBSHCTRYCTCTRVYR Direction: Backward Position #: 1 Overlap #: 17 Alignment: --BATCSVMCTGCCTCTVB YRTCTCTCTCTRYCTCTRR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C011 Combined Motif Original Motif Reverse Complement YMTCBSHCTRYCTCTRVYR RRTCTCTCTCRRTCTCRR DVTCTCTCTSVVTCTVRDR Direction: Forward Position #: 1 Overlap #: 18 Alignment: YMTCBSHCTRYCTCTRVYR RRTCTCTCTCRRTCTCRR- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Original Motif Original Motif DVTCTCTCTSVVTCTVRDR GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC DVTSBCYCTSBCTVYCVBVCCCCSSCCCCCSSC Direction: Forward Position #: 4 Overlap #: 16 Alignment: DVTCTCTCTSVVTCTVRDR-------------- ---GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C132 Original Motif Reverse Complement DVTSBCYCTSBCTVYCVBVCCCCSSCCCCCSSC WCCTKGWTCTCWCMCTGW WVCTBGHTCTCHCHCTSDBVCCCCSSCCCCCSSC Direction: Forward Position #: 2 Overlap #: 17 Alignment: -DVTSBCYCTSBCTVYCVBVCCCCSSCCCCCSSC WCCTKGWTCTCWCMCTGW---------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C017 Combined Motif Original Motif Reverse Complement WVCTBGHTCTCHCHCTSDBVCCCCSSCCCCCSSC SWSTCTCTSWSTCTCWSW VHCTSKCTCTCTCTCTSWBVCCCCSSCCCCCSSC Direction: Forward Position #: 1 Overlap #: 18 Alignment: WVCTBGHTCTCHCHCTSDBVCCCCSSCCCCCSSC SWSTCTCTSWSTCTCWSW---------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 45 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C045 C015 Original Motif Original Motif RYAGMCMKGKCTRY DVAGCCWKGGCTACAVAGCK DHAGCCHKGKCTACAVAGCK Direction: Forward Position #: 1 Overlap #: 14 Alignment: RYAGMCMKGKCTRY------ DVAGCCWKGGCTACAVAGCK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C036 Combined Motif Original Motif Original Motif DHAGCCHKGKCTACAVAGCK MKAGMKMGAGAKMKAGMK DHAGMBAGVKCBASABAGMGMK Direction: Forward Position #: 5 Overlap #: 16 Alignment: DHAGCCHKGKCTACAVAGCK-- ----MKAGMKMGAGAKMKAGMK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C126 Combined Motif Reverse Complement Reverse Complement RRCYCTBTSTVGYVCTBRCTDD SMCCAGSYYSGMCWBS RRHCCWSBBTVGCCHBBRCTDD Direction: Forward Position #: 2 Overlap #: 16 Alignment: RRCYCTBTSTVGYVCTBRCTDD -SMCCAGSYYSGMCWBS----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C114 Reverse Complement Reverse Complement DHAGMBVHGGCVABVSWGGDMK SMAGACRRGGMTKS VMAGMCRDGGCBDBVSWGGDMK Direction: Forward Position #: 1 Overlap #: 14 Alignment: DHAGMBVHGGCVABVSWGGDMK SMAGACRRGGMTKS-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C005 Reverse Complement Original Motif RRHCCWSBBDVGCCDKGYCTRV TCTGTAGMCCAGGCTGGCCTYGW DVTSYAGHCCAGSCTGGCCTBVW Direction: Forward Position #: 1 Overlap #: 22 Alignment: RRHCCWSBBDVGCCDKGYCTRV- TCTGTAGMCCAGGCTGGCCTYGW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 46 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C046 C007 Reverse Complement Original Motif YSWGTTCKAGGYCASY KTTSTGAGTTCVAGGMCAGCCTS CCTSYBRRKTYYMRGBCMVBKTT Direction: Backward Position #: 5 Overlap #: 16 Alignment: ---YSWGTTCKAGGYCASY---- KTTSTGAGTTCVAGGMCAGCCTS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C040 Combined Motif Original Motif Original Motif CCTSYBRRKTYYMRGBCMVBKTT RSTGASYTCMARSYCAGY CCTVCTGRBTTCMAGSYCAGBTT Direction: Forward Position #: 4 Overlap #: 18 Alignment: CCTSYBRRKTYYMRGBCMVBKTT ---RSTGASYTCMARSYCAGY-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C009 Original Motif Reverse Complement CCTVCTGRBTTCMAGSYCAGBTT MHAGTGCTGGGATTAAAGGCBT MHMSTGCTGGGWTYAARGBCVKBTT Direction: Forward Position #: 3 Overlap #: 20 Alignment: --CCTVCTGRBTTCMAGSYCAGBTT MHAGTGCTGGGATTAAAGGCBT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C048 Combined Motif Original Motif Original Motif MHMSTGCTGGGWTYAARGBCVKBTT SGAGGCWSWGGCAGSC TTBGRGDYTVAGGSMGBBMHMSTGC Direction: Backward Position #: 3 Overlap #: 16 Alignment: MHMSTGCTGGGWTYAARGBCVKBTT -------SGAGGCWSWGGCAGSC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C019 Combined Motif Reverse Complement Reverse Complement GCASRHRBBCYSCCTVAKHCKCVAA CTGCCTCCCAAGTGCTGGGMWR GCASRCDGCCTCCCDARTSCTSGRAWR Direction: Forward Position #: 6 Overlap #: 20 Alignment: GCASRHRBBCYSCCTVAKHCKCVAA-- -----CTGCCTCCCAAGTGCTGGGMWR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 47 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C047 C013 Original Motif Original Motif TSGAAMTCACTMKGTASA WVCTGGAACTCACTHTGTAGACCAGGM CCAGGMTGGAACTCACTHTGTAGAWVC Direction: Backward Position #: 7 Overlap #: 18 Alignment: ---TSGAAMTCACTMKGTASA------ WVCTGGAACTCACTHTGTAGACCAGGM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C124 Original Motif Original Motif CCAGGMTGGAACTCACTHTGTAGAWVC WSACSRSGCTGSYSTCSW WSACCAGGCTGGHVYYCACTHTGTAGAWVC Direction: Forward Position #: 4 Overlap #: 15 Alignment: ---CCAGGMTGGAACTCACTHTGTAGAWVC WSACSRSGCTGSYSTCSW------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C099 Original Motif Original Motif WSACCAGGCTGGHVYYCACTHTGTAGAWVC MYCCCMGCACTCKGGARK MYCHCMSCASKCTGGARBYCACTHTGTAGAWVC Direction: Forward Position #: 4 Overlap #: 15 Alignment: ---WSACCAGGCTGGHVYYCACTHTGTAGAWVC MYCCCMGCACTCKGGARK--------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C027 Combined Motif Reverse Complement Reverse Complement GVWTCTACADAGTGMVKTCCAGRSTGSYGDGKR WHKAGACAGGGTTTCMCTGKY GVWTCTASAVAGKGWDTYCCWGDBTGSYGDGKR Direction: Forward Position #: 4 Overlap #: 21 Alignment: GVWTCTACADAGTGMVKTCCAGRSTGSYGDGKR ---WHKAGACAGGGTTTCMCTGKY--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C019 Combined Motif Reverse Complement Reverse Complement MYCHCMSCABHCWGGKADWCYCTVTSTAGAWVC CTGCCTCCCAAGTGCTGGGMWR MYCHCMSCWGCCTSSBAADYBCTGKGHARAWVC Direction: Forward Position #: 8 Overlap #: 22 Alignment: MYCHCMSCABHCWGGKADWCYCTVTSTAGAWVC -------CTGCCTCCCAAGTGCTGGGMWR---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 48 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C048 C020 Reverse Complement Original Motif GSCTGCCWSWGCCTCS BSCVCCSCCVCSCCCACS SSCDSCCYCHSCCYCVCS Direction: Forward Position #: 1 Overlap #: 16 Alignment: GSCTGCCWSWGCCTCS-- BSCVCCSCCVCSCCCACS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C037 Combined Motif Original Motif Original Motif SSCDSCCYCHSCCYCVCS SVCCGBCMCCSYCMCCVB SVCHSCCMCMSCCHCCSS Direction: Forward Position #: 1 Overlap #: 18 Alignment: SSCDSCCYCHSCCYCVCS SVCCGBCMCCSYCMCCVB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C085 Combined Motif Original Motif Reverse Complement SVCHSCCMCMSCCHCCSS SKCSVHMTCTDBSKCSV SBCVSCCHCHVCCBCSSS Direction: Forward Position #: 1 Overlap #: 17 Alignment: SVCHSCCMCMSCCHCCSS SKCSVHMTCTDBSKCSV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Original Motif Original Motif SBCVSCCHCHVCCBCSSS GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC GBCBCBCYCYVCCBCSCCCCSSCCCCCSSC Direction: Forward Position #: 1 Overlap #: 18 Alignment: SBCVSCCHCHVCCBCSSS------------ GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C066 Combined Motif Original Motif Original Motif GBCBCBCYCYVCCBCSCCCCSSCCCCCSSC MAMTCCCMSKGCCTCTK GBCBCVCYCYVCCBSCCYCYBSCCCCCSSC Direction: Forward Position #: 5 Overlap #: 17 Alignment: GBCBCBCYCYVCCBCSCCCCSSCCCCCSSC ----MAMTCCCMSKGCCTCTK--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 49 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C049 C010 Reverse Complement Reverse Complement AWTTATTTTWWTW WWTTTTTTTTTTWWTTTTWWW AWTTWTTTTTTTWWTTTTWWW Direction: Forward Position #: 1 Overlap #: 13 Alignment: AWTTATTTTWWTW-------- WWTTTTTTTTTTWWTTTTWWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C001 Combined Motif Original Motif Reverse Complement AWTTWTTTTTTTWWTTTTWWW WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW AWTTWTTTTTTTWWTTTTWTTTTTWWTTTTTWWW Direction: Forward Position #: 5 Overlap #: 17 Alignment: AWTTWTTTTTTTWWTTTTWWW------------- ----WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C043 Combined Motif Original Motif Reverse Complement AWTTWTTTTTTTWWTTTTWTTTTTWWTTTTTWWW WATTMTTTTTTWTTWW WWTTHTTTTTTTTTTTTTWTTTTTWWTTTTTWWW Direction: Forward Position #: 1 Overlap #: 16 Alignment: AWTTWTTTTTTTWWTTTTWTTTTTWWTTTTTWWW WATTMTTTTTTWTTWW------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C090 Combined Motif Reverse Complement Original Motif WWWAAAAAWWAAAAAWAAAAAAAAAAAAAHAAWW WAAWWAAADWWWAW WWWAAAAAAWWAAAWWAAAWAAAAAAAAAHAAWW Direction: Forward Position #: 7 Overlap #: 14 Alignment: WWWAAAAAWWAAAAAWAAAAAAAAAAAAAHAAWW ------WAAWWAAADWWWAW-------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C131 Combined Motif Original Motif Original Motif WWWAAAAAAWWAAAWWAAAWAAAAAAAAAHAAWW WWAADAARVHAAWW WWWAAAWWAAWAAADHAAWWAAAAAAAAAHAAWW Direction: Forward Position #: 7 Overlap #: 14 Alignment: WWWAAAAAAWWAAAWWAAAWAAAAAAAAAHAAWW ------WWAADAARVHAAWW-------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 50 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C050 C014 Reverse Complement Original Motif CYKGAGGSMGRGGCVG YSGGAGGCAGAGGCMS CBGGAGGCAGRGGCMG Direction: Forward Position #: 1 Overlap #: 16 Alignment: CYKGAGGSMGRGGCVG YSGGAGGCAGAGGCMS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C083 Combined Motif Reverse Complement Reverse Complement CYGCCKCTGCCTCCBG CYRGAGSMKSAGGBRG CYGCCKSWGCCTSMGGBRG Direction: Forward Position #: 4 Overlap #: 13 Alignment: CYGCCKCTGCCTCCBG--- ---CYRGAGSMKSAGGBRG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C086 Original Motif Original Motif CYGCCKSWGCCTSMGGBRG CSGGAGKCWGMGGSASG CBGSHGBCDSMKSVVGBRG Direction: Forward Position #: 1 Overlap #: 17 Alignment: CYGCCKSWGCCTSMGGBRG CSGGAGKCWGMGGSASG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C101 Combined Motif Reverse Complement Original Motif CKBCVVSYRSHGBCHSCBG YTSCCTSKSVSTCCCAR YTSCCBSBGCBTSCYVVBG Direction: Forward Position #: 1 Overlap #: 17 Alignment: CKBCVVSYRSHGBCHSCBG YTSCCTSKSVSTCCCAR-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Reverse Complement Reverse Complement CBVBKGSABGCVSVGGSAK GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC SSSBGGGRSSSGGDGGBRGVMGGSHGKGSC Direction: Forward Position #: 1 Overlap #: 19 Alignment: CBVBKGSABGCVSVGGSAK----------- GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 51 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C051 C008 Original Motif Original Motif SGCCCCCHCCCS SSCCSSCCCCSSCCSS SGCCCCCVCCSSSSCC Direction: Backward Position #: 1 Overlap #: 12 Alignment: ----SGCCCCCHCCCS SSCCSSCCCCSSCCSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C104 Original Motif Original Motif SGCCCCCVCCSSSSCC SSCCYCCCCDCCSS SSCCCCCCCCCCSSCC Direction: Forward Position #: 1 Overlap #: 14 Alignment: SGCCCCCVCCSSSSCC SSCCYCCCCDCCSS-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C037 Original Motif Original Motif SSCCCCCCCCCCSSCC SVCCGBCMCCSYCMCCVB SVCCVCCMCCSCCVCCVB Direction: Forward Position #: 1 Overlap #: 16 Alignment: SSCCCCCCCCCCSSCC-- SVCCGBCMCCSYCMCCVB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C094 Reverse Complement Reverse Complement BVGGVGGSGGRGGVGGVS CSGGGGCSGGGDSS SSGGGGSSGGGGSSGGVS Direction: Forward Position #: 1 Overlap #: 14 Alignment: BVGGVGGSGGRGGVGGVS CSGGGGCSGGGDSS---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C020 Combined Motif Original Motif Reverse Complement SSGGGGSSGGGGSSGGVS SGTGGGSGVGGSGGVGSB SSGGGBGGGGGGGGGGGVGSB Direction: Forward Position #: 4 Overlap #: 15 Alignment: SSGGGGSSGGGGSSGGVS--- ---SGTGGGSGVGGSGGVGSB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 52 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C052 C007 Original Motif Original Motif GAGTBVSAGGCMAGVC KTTSTGAGTTCVAGGMCAGCCTS KTTSTGAGTTCVAGGHCAGCCTS Direction: Forward Position #: 6 Overlap #: 16 Alignment: -----GAGTBVSAGGCMAGVC-- KTTSTGAGTTCVAGGMCAGCCTS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C008 Reverse Complement Reverse Complement SAGGCTGDCCTVGAACTCASAAY SSGGSSGGGGSSGGSS SVGGCBGGSSTSGRVCTCASAAY Direction: Forward Position #: 1 Overlap #: 16 Alignment: SAGGCTGDCCTVGAACTCASAAY SSGGSSGGGGSSGGSS------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Reverse Complement Original Motif KTTSTGAGBMCSASSCCVGCCVS GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC KTTSKGMBCHCCMBSCCHSCCCCCSSCCCCCSSC Direction: Forward Position #: 5 Overlap #: 19 Alignment: KTTSTGAGBMCSASSCCVGCCVS----------- ----GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C039 Combined Motif Reverse Complement Original Motif GSSGGGGGSSGGGGGSDGGSBRGGDGBYCRSAAY SMAGRSCAGSSYGGBS GSSGGGGRGVGSRGSSHGGBSRGGDGBYCRSAAY Direction: Forward Position #: 6 Overlap #: 16 Alignment: GSSGGGGGSSGGGGGSDGGSBRGGDGBYCRSAAY -----SMAGRSCAGSSYGGBS------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C012 Combined Motif Reverse Complement Reverse Complement KTTSKGMBCHCCMSBCCDSSCKSCVCMCCCCSSC YRTCTCTCTCTRYCTCTRR KTTSKBABCTCYCKCYVBCBCTVVVCMCCCCSSC Direction: Forward Position #: 6 Overlap #: 19 Alignment: KTTSKGMBCHCCMSBCCDSSCKSCVCMCCCCSSC -----YRTCTCTCTCTRYCTCTRR---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 53 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C053 C132 Original Motif Original Motif RMACRGAGAAAYCCTGKY WCAGRGWGAGAWCYAGGW DCASRGAGARATCYWGGH Direction: Backward Position #: 1 Overlap #: 18 Alignment: RMACRGAGAAAYCCTGKY WCAGRGWGAGAWCYAGGW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C013 Reverse Complement Original Motif HCCWKGATKTCTCMSTGD WVCTGGAACTCACTHTGTAGACCAGGM WCCTGGAWBTCWCHBTGTAGACCAGGM Direction: Forward Position #: 1 Overlap #: 18 Alignment: HCCWKGATKTCTCMSTGD--------- WVCTGGAACTCACTHTGTAGACCAGGM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C042 Original Motif Original Motif WCCTGGAWBTCWCHBTGTAGACCAGGM WGTCCKRGAACYMACTCW WGWCCTRGAACTCACTCTGTAGACCAGGM Direction: Forward Position #: 3 Overlap #: 16 Alignment: --WCCTGGAWBTCWCHBTGTAGACCAGGM WGTCCKRGAACYMACTCW----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C002 Combined Motif Reverse Complement Reverse Complement YCCTGGTCTACAGAGTGAGTTCMAGGWCW MKKTKKGTGTGTGTGTGTKKKTA YCCTGGTCTACAGAGTGAGTTCMAKGTBDGTGTGTGTGTGTKKKTA Direction: Forward Position #: 24 Overlap #: 6 Alignment: YCCTGGTCTACAGAGTGAGTTCMAGGWCW----------------- -----------------------MKKTKKGTGTGTGTGTGTKKKTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C057 Combined Motif Reverse Complement Original Motif TAYRYACACACACACACDBACYTRGAACTCACTCTGTAGACCAGGM WRMARYAAMARYAAMAWH TAHAMAYAMAMACAMAMWHACYTRGAACTCACTCTGTAGACCAGGM Direction: Forward Position #: 2 Overlap #: 18 Alignment: TAYRYACACACACACACDBACYTRGAACTCACTCTGTAGACCAGGM -WRMARYAAMARYAAMAWH--------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 54 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C054 C003 Reverse Complement Reverse Complement SSGGGGGGGHGGSS GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC GSGGGGGGGVGGGGGGKGGVMGGSHGKGSC Direction: Forward Position #: 1 Overlap #: 14 Alignment: SSGGGGGGGHGGSS---------------- GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C023 Combined Motif Reverse Complement Original Motif GSCYCHSCCYVCCYCCCCCCVCCCCCCCSC SSCCSCBHCSCCSS GSCYCHSCCYSCCHCSCCCCVCCCCCCCSC Direction: Forward Position #: 7 Overlap #: 14 Alignment: GSCYCHSCCYVCCYCCCCCCVCCCCCCCSC ------SSCCSCBHCSCCSS---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C008 Combined Motif Reverse Complement Reverse Complement GSGGGGGGGVGGGGSGDGGSKGGSHGKGSC SSGGSSGGGGSSGGSS GSGSGGGGSGGGGSSGGSSSKGGSHGKGSC Direction: Forward Position #: 4 Overlap #: 16 Alignment: GSGGGGGGGVGGGGSGDGGSKGGSHGKGSC ---SSGGSSGGGGSSGGSS----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C104 Original Motif Reverse Complement GSGSGGGGSGGGGSSGGSSSKGGSHGKGSC SSGGHGGGGKGGSS SSGGVGGGGGGGSSSGGSSSKGGSHGKGSC Direction: Forward Position #: 1 Overlap #: 14 Alignment: GSGSGGGGSGGGGSSGGSSSKGGSHGKGSC SSGGHGGGGKGGSS---------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C004 Combined Motif Reverse Complement Original Motif GSCYCHSCCYSSSCCSSSCCCCCCCVCCSS SSSSSCSSSSSCCSSSSCCSCSSSSSS GSCYCHSSCBSCSCCSSCCSCCSCCSCCSSSSS Direction: Forward Position #: 7 Overlap #: 24 Alignment: GSCYCHSCCYSSSCCSSSCCCCCCCVCCSS--- ------SSSSSCSSSSSCCSSSSCCSCSSSSSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 55 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C055 C012 Original Motif Original Motif MKAGAGMKMKAGAGMK MKAGAGMKAGAGAGAGAKM MKAGAGMKAGAGAGAGAKM Direction: Forward Position #: 1 Overlap #: 16 Alignment: MKAGAGMKMKAGAGMK--- MKAGAGMKAGAGAGAGAKM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C011 Combined Motif Reverse Complement Reverse Complement YRTCTCTCTCTRYCTCTRR RRTCTCTCTCRRTCTCRR DRTCTCTCTCDRTCTCDRR Direction: Forward Position #: 1 Overlap #: 18 Alignment: YRTCTCTCTCTRYCTCTRR RRTCTCTCTCRRTCTCRR- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C017 Combined Motif Reverse Complement Original Motif MKHGAGAKDGAGAGAGAKH WSWGAGASWSAGAGASWS HBWGAGAGWGAGAGAGABH Direction: Forward Position #: 1 Overlap #: 18 Alignment: MKHGAGAKDGAGAGAGAKH WSWGAGASWSAGAGASWS- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C121 Reverse Complement Original Motif DBTCTCTCTCWCTCTCWBH MRCCCTRGCYSTCCYK MRCCCTVKCTCTCYYTCTCWBH Direction: Forward Position #: 4 Overlap #: 13 Alignment: ---DBTCTCTCTCWCTCTCWBH MRCCCTRGCYSTCCYK------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C036 Reverse Complement Original Motif HBWGAGAKKGAGAGYVAGGGMY MKAGMKMGAGAKMKAGMK MKAGAGMGRGAKMGHGAKGGMY Direction: Forward Position #: 1 Overlap #: 18 Alignment: HBWGAGAKKGAGAGYVAGGGMY MKAGMKMGAGAKMKAGMK---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 56 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C056 C001 Reverse Complement Reverse Complement HWTTYTKWMTTTYWT WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW TTTTWWTTTTTWWWWWTTTTTWHTTTTWTW Direction: Backward Position #: 15 Overlap #: 15 Alignment: -HWTTYTKWMTTTYWT-------------- WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C016 Combined Motif Original Motif Reverse Complement TTTTWWTTTTTWWWWWTTTTTWHTTTTWTW WWTTYTWTYTTWDTTTWTTWH TTTWWTTTTTTTTWDTTTTTTWHTTTTWTW Direction: Forward Position #: 3 Overlap #: 21 Alignment: TTTTWWTTTTTWWWWWTTTTTWHTTTTWTW --WWTTYTWTYTTWDTTTWTTWH------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C010 Original Motif Reverse Complement TTTWWTTTTTTTTWDTTTTTTWHTTTTWTW WWTTTTTTTTTTWWTTTTWWW WWTTTTTTTTTTWTTTTTDWWTTTTWHTTTTWTW Direction: Forward Position #: 5 Overlap #: 17 Alignment: ----TTTWWTTTTTTTTWDTTTTTTWHTTTTWTW WWTTTTTTTTTTWWTTTTWWW------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C139 Combined Motif Original Motif Reverse Complement WWTTTTTTTTTTWTTTTTDWWTTTTWHTTTTWTW WWTTTTVWWWBTTTYWW WWTTTTTTTTBWWWBTTTHWWTTTTWHTTTTWTW Direction: Forward Position #: 5 Overlap #: 17 Alignment: WWTTTTTTTTTTWTTTTTDWWTTTTWHTTTTWTW ----WWTTTTVWWWBTTTYWW------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C030 Combined Motif Reverse Complement Original Motif WAWAAAAHWAAAAWWHAAAVWWWVAAAAAAAAWW WYAAAAAMAAAAAAAAWAM WAWWAAAHWAAAAAWAAAAHAHWVAAAAAAAAWW Direction: Forward Position #: 4 Overlap #: 19 Alignment: WAWAAAAHWAAAAWWHAAAVWWWVAAAAAAAAWW ---WYAAAAAMAAAAAAAAWAM------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 57 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C057 C001 Original Motif Original Motif WRMARYAAMARYAAMAWH WWWAAAAAWWAAAAAWAAAAAWWAAAAHWW WWWAAAAWAAAAAWAAAAAHWWWAAAAAWW Direction: Backward Position #: 3 Overlap #: 18 Alignment: ----------WRMARYAAMARYAAMAWH-- WWWAAAAAWWAAAAAWAAAAAWWAAAAHWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C010 Combined Motif Original Motif Original Motif WWWAAAAWAAAAAWAAAAAHWWWAAAAAWW WWWAAAAWWAAAAAAAAAAWW WWWAAAAWAAAAAAAAAAAWWWWAAAAAWW Direction: Forward Position #: 1 Overlap #: 21 Alignment: WWWAAAAWAAAAAWAAAAAHWWWAAAAAWW WWWAAAAWWAAAAAAAAAAWW--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C030 Original Motif Original Motif WWWAAAAWAAAAAAAAAAAWWWWAAAAAWW WYAAAAAMAAAAAAAAWAM WHAAAAAHAAAAAAAAWAAWWWWAAAAAWW Direction: Forward Position #: 1 Overlap #: 19 Alignment: WWWAAAAWAAAAAAAAAAAWWWWAAAAAWW WYAAAAAMAAAAAAAAWAM----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C016 Combined Motif Original Motif Original Motif WHAAAAAHAAAAAAAAWAAWWWWAAAAAWW HWAAWAAAHWAAMAWAMAAWW WWAAAAAAMAAAMAAAMAAWWWWAAAAAWW Direction: Forward Position #: 1 Overlap #: 21 Alignment: WHAAAAAHAAAAAAAAWAAWWWWAAAAAWW HWAAWAAAHWAAMAWAMAAWW--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C032 Reverse Complement Reverse Complement WWTTTTTWWWWTTYTTTYTTTYTTTTTTWW KWYTWKWYTTTDMWTTWH KWTTWTTTTTTWHWTTWWYTTTYTTTTTTWW Direction: Forward Position #: 2 Overlap #: 17 Alignment: -WWTTTTTWWWWTTYTTTYTTTYTTTTTTWW KWYTWKWYTTTDMWTTWH------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 58 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C058 C112 Original Motif Original Motif CYCCBCSGVCYCCBC CCBCYSSSGCCCCSS CCCCBSSSRCCCCBS Direction: Backward Position #: 1 Overlap #: 15 Alignment: CYCCBCSGVCYCCBC CCBCYSSSGCCCCSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C037 Reverse Complement Reverse Complement SBGGGGMSSSBGGGG BVGGYGKSGGYGBCGGVS SVGGBGBSGGBGGVGGVS Direction: Forward Position #: 1 Overlap #: 15 Alignment: SBGGGGMSSSBGGGG--- BVGGYGKSGGYGBCGGVS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C140 Combined Motif Reverse Complement Original Motif SVCCVCCVCCSBCVCCVS BSCCBCVSSSBCCYHVG SBCCBCCSSSSCCHHCVS Direction: Forward Position #: 1 Overlap #: 17 Alignment: SVCCVCCVCCSBCVCCVS BSCCBCVSSSBCCYHVG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Reverse Complement Reverse Complement SVGDHGGSSSSGGBGGBS GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC GSGVDGGGSSGGGGGGBGGVMGGSHGKGSC Direction: Forward Position #: 1 Overlap #: 18 Alignment: SVGDHGGSSSSGGBGGBS------------ GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C004 Combined Motif Original Motif Reverse Complement GSGVDGGGSSGGGGGGBGGVMGGSHGKGSC SSSSSSGSGGSSSSGGSSSSSGSSSSS SSSSSGGSGGSGGSGGSGGSVGGSVGBGSC Direction: Forward Position #: 1 Overlap #: 27 Alignment: GSGVDGGGSSGGGGGGBGGVMGGSHGKGSC SSSSSSGSGGSSSSGGSSSSSGSSSSS--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 59 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C059 C008 Original Motif Original Motif SYCCDCCCCCRG SSCCSSCCCCSSCCSS SCCCBSCCCCVSCCSS Direction: Forward Position #: 1 Overlap #: 12 Alignment: SYCCDCCCCCRG---- SSCCSSCCCCSSCCSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Reverse Complement Reverse Complement SSGGSVGGGGSBGGGS GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC SSGGSSGGGGGVGGGGGGGKGGVMGGSHGKGSC Direction: Forward Position #: 4 Overlap #: 13 Alignment: SSGGSVGGGGSBGGGS----------------- ---GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C081 Combined Motif Reverse Complement Original Motif GSCYCHSCCYVCCYCCCCCCCVCCCCCSSCCSS BCCSHCCCSCMG GSCYCHSCCCVHCCCSCHSCCVCCCCCSSCCSS Direction: Forward Position #: 8 Overlap #: 12 Alignment: GSCYCHSCCYVCCYCCCCCCCVCCCCCSSCCSS -------BCCSHCCCSCMG-------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C054 Combined Motif Original Motif Original Motif GSCYCHSCCCVHCCCSCHSCCVCCCCCSSCCSS SSCCDCCCCCCCSS GSCYCHSSCCVCCCCCCCSCCVCCCCCSSCCSS Direction: Forward Position #: 7 Overlap #: 14 Alignment: GSCYCHSCCCVHCCCSCHSCCVCCCCCSSCCSS ------SSCCDCCCCCCCSS------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C037 Combined Motif Original Motif Original Motif GSCYCHSSCCVCCCCCCCSCCVCCCCCSSCCSS SVCCGBCMCCSYCMCCVB GSVCCBSCCCVVCCCCCVSCCVCCCCCSSCCSS Direction: Forward Position #: 2 Overlap #: 18 Alignment: GSCYCHSSCCVCCCCCCCSCCVCCCCCSSCCSS -SVCCGBCMCCSYCMCCVB-------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 60 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C060 C041 Original Motif Original Motif SMGGCAKMGGCAKS CSGAGGCMKAGGCASS CSGAGGCAKAGGCAGS Direction: Forward Position #: 3 Overlap #: 14 Alignment: --SMGGCAKMGGCAKS CSGAGGCMKAGGCASS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C048 Original Motif Reverse Complement CSGAGGCAKAGGCAGS GSCTGCCWSWGCCTCS SSSDGSCWSAGSCWSS Direction: Forward Position #: 1 Overlap #: 16 Alignment: CSGAGGCAKAGGCAGS GSCTGCCWSWGCCTCS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C118 Combined Motif Reverse Complement Original Motif SSWGSCTSWGSCDSSS GMCTGCSWSTGCCKC SSWGVCTSYGDSTGCCKC Direction: Forward Position #: 4 Overlap #: 13 Alignment: SSWGSCTSWGSCDSSS-- ---GMCTGCSWSTGCCKC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C086 Combined Motif Reverse Complement Reverse Complement GRGGCASHCKSAGVCWSS CSTSCCYCWGRCTCCSG GRGSSDSCCBCWGRCTSCSG Direction: Forward Position #: 4 Overlap #: 15 Alignment: GRGGCASHCKSAGVCWSS-- ---CSTSCCYCWGRCTCCSG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C028 Combined Motif Original Motif Original Motif GRGSSDSCCBCWGRCTSCSG BVGASSCASAGVSABV GRGSSVGMSBCAGASHSMSG Direction: Forward Position #: 5 Overlap #: 16 Alignment: GRGSSDSCCBCWGRCTSCSG ----BVGASSCASAGVSABV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 61 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C061 C073 Reverse Complement Reverse Complement RGGCCDGCCTBRRCMY KAGYSYKGGCTKRSCWYK KRGBCCKGSCTBRVCHYK Direction: Forward Position #: 2 Overlap #: 16 Alignment: -RGGCCDGCCTBRRCMY- KAGYSYKGGCTKRSCWYK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C122 Original Motif Original Motif KRGBCCKGSCTBRVCHYK YAGCCCWGSCWSBCCTR BAGCCCDGSCTBBCCTBK Direction: Forward Position #: 1 Overlap #: 17 Alignment: KRGBCCKGSCTBRVCHYK YAGCCCWGSCWSBCCTR- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C005 Combined Motif Original Motif Reverse Complement BAGCCCDGSCTBBCCTBK WCKAGGCCAGCCTGGYCTACAGA BAGHCBAGGCYAGCCTGGYCTACAGA Direction: Forward Position #: 4 Overlap #: 15 Alignment: BAGCCCDGSCTBBCCTBK-------- ---WCKAGGCCAGCCTGGYCTACAGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C096 Original Motif Reverse Complement BAGHCBAGGCYAGCCTGGYCTACAGA RKGGCMMGSCKRGRKY DDGVCHAGSCBRGVBTGGYCTACAGA Direction: Forward Position #: 1 Overlap #: 16 Alignment: BAGHCBAGGCYAGCCTGGYCTACAGA RKGGCMMGSCKRGRKY---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C093 Combined Motif Reverse Complement Original Motif TCTGTAGMCCABVCKVGSCTDGVCHH AKCCASMBSCCKSTGCMT TCTGTAGVCVVVVSCCGSYBCVBCHH Direction: Forward Position #: 6 Overlap #: 18 Alignment: TCTGTAGMCCABVCKVGSCTDGVCHH -----AKCCASMBSCCKSTGCMT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 62 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C062 C016 Original Motif Original Motif WWAMAWRMAMAYWAAHWW HWAAWAAAHWAAMAWAMAAWW AWAAAHAMAMAWAAAAWWHWA Direction: Backward Position #: 1 Overlap #: 18 Alignment: ---WWAMAWRMAMAYWAAHWW HWAAWAAAHWAAMAWAMAAWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C001 Combined Motif Original Motif Original Motif AWAAAHAMAMAWAAAAWWHWA WWWAAAAAWWAAAAAWAAAAAWWAAAAHWW AWAAAWAAAAAWWWAAAAWWAAAAAWWAAAAHWW Direction: Forward Position #: 5 Overlap #: 17 Alignment: AWAAAHAMAMAWAAAAWWHWA------------- ----WWWAAAAAWWAAAAAWAAAAAWWAAAAHWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C030 Combined Motif Reverse Complement Reverse Complement WWHTTTTWWTTTTTWWTTTTWWWTTTTTWTTTWT YTWTTTTTTTTYTTTTTMW WWHTTTTTWWTTTTWTTTTTTTTTHTTTWTTTWT Direction: Forward Position #: 8 Overlap #: 19 Alignment: WWHTTTTWWTTTTTWWTTTTWWWTTTTTWTTTWT -------YTWTTTTTTTTYTTTTTMW-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C010 Combined Motif Original Motif Reverse Complement WWHTTTTTWWTTTTWTTTTTTTTTHTTTWTTTWT WWTTTTTTTTTTWWTTTTWWW WWWTTTTTTTTTTTWWTTTTWWWTHTTTWTTTWT Direction: Forward Position #: 3 Overlap #: 21 Alignment: WWHTTTTTWWTTTTWTTTTTTTTTHTTTWTTTWT --WWTTTTTTTTTTWWTTTTWWW----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C032 Combined Motif Reverse Complement Original Motif AWAAAWAAAHAWWWAAAAWWAAAAAAAAAAAWWW HWAAWYDAAAMWRWAMWR WWAAWHWAAAAWDWAAAAWWAAAAAAAAAAAWWW Direction: Forward Position #: 1 Overlap #: 18 Alignment: AWAAAWAAAHAWWWAAAAWWAAAAAAAAAAAWWW HWAAWYDAAAMWRWAMWR---------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 63 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C063 C024 Reverse Complement Reverse Complement TTHRWTTTTWYRTTY THTTDMWTTTTWKMTTDA THTTHVWTTTTWTVTTHA Direction: Forward Position #: 3 Overlap #: 15 Alignment: --TTHRWTTTTWYRTTY- THTTDMWTTTTWKMTTDA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C016 Combined Motif Reverse Complement Original Motif THAABAWAAAAWBHAAHA HWAAWAAAHWAAMAWAMAAWW THAHWAAAAAAHWAAAAWAMAAWW Direction: Forward Position #: 4 Overlap #: 15 Alignment: THAABAWAAAAWBHAAHA------ ---HWAAWAAAHWAAMAWAMAAWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C079 Combined Motif Original Motif Original Motif THAHWAAAAAAHWAAAAWAMAAWW ADAAAKWAAAAWAKARW THAHWAWAAAWWAAAAWADAAAWW Direction: Forward Position #: 6 Overlap #: 17 Alignment: THAHWAAAAAAHWAAAAWAMAAWW -----ADAAAKWAAAAWAKARW-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C097 Combined Motif Original Motif Original Motif THAHWAWAAAWWAAAAWADAAAWW WBAASWWAAAAWWSAAVW THAHWWHAAVWWAAAAWWVAADWW Direction: Forward Position #: 6 Overlap #: 18 Alignment: THAHWAWAAAWWAAAAWADAAAWW -----WBAASWWAAAAWWSAAVW- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C001 Combined Motif Reverse Complement Reverse Complement WWDTTVWWTTTTWWBTTHWWHTHA WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW WWDTTHWWTTTTWWHTTTTWTTTTTWWTTTTTWWW Direction: Forward Position #: 6 Overlap #: 19 Alignment: WWDTTVWWTTTTWWBTTHWWHTHA----------- -----WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 64 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C064 C131 Reverse Complement Reverse Complement RTTYTTTTRTTTD WWTTHBKTTDTTWW WWTTHTTTTDTTWW Direction: Forward Position #: 2 Overlap #: 13 Alignment: -RTTYTTTTRTTTD WWTTHBKTTDTTWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C010 Combined Motif Reverse Complement Original Motif WWAADAAAAHAAWW WWWAAAAWWAAAAAAAAAAWW WWWADAAAAWAAAAAAAAAAAWW Direction: Forward Position #: 3 Overlap #: 12 Alignment: WWAADAAAAHAAWW--------- --WWWAAAAWWAAAAAAAAAAWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C079 Reverse Complement Reverse Complement WWTTTTTTTTTTTWTTTTDTWWW WKTRTWTTTTWRTTTDT WTTDTTTTTTWTTTTTTTDTWWW Direction: Forward Position #: 1 Overlap #: 17 Alignment: WWTTTTTTTTTTTWTTTTDTWWW WKTRTWTTTTWRTTTDT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C152 Combined Motif Original Motif Reverse Complement WTTDTTTTTTWTTTTTTTDTWWW YWTKYWTKTKWYKKWR WTTDYWTTTTTTTTTYTTWDWWW Direction: Forward Position #: 5 Overlap #: 16 Alignment: WTTDTTTTTTWTTTTTTTDTWWW ----YWTKYWTKTKWYKKWR--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C024 Reverse Complement Original Motif WWWDWAAMAAAAAAAAAWMDAAW TDAAYRWAAAAWYDAAHA WWAAHAAAAAAWWAAAAAMDAAW Direction: Forward Position #: 1 Overlap #: 18 Alignment: WWWDWAAMAAAAAAAAAWMDAAW TDAAYRWAAAAWYDAAHA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 65 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C065 C007 Reverse Complement Reverse Complement YSTRGAWCTCASR SAGGCTGYCCTVGAACTCASAAY SAGGCTGYCCTRGAACTCASRAY Direction: Forward Position #: 9 Overlap #: 13 Alignment: --------YSTRGAWCTCASR-- SAGGCTGYCCTVGAACTCASAAY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C040 Original Motif Reverse Complement SAGGCTGYCCTRGAACTCASRAY KCTGMSKTYGAMSTCASM KCTGAGGYTGHMCTCRRMCTCASRAY Direction: Forward Position #: 4 Overlap #: 15 Alignment: ---SAGGCTGYCCTRGAACTCASRAY KCTGMSKTYGAMSTCASM-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C013 Reverse Complement Reverse Complement KTKSTGAGYKKGAGRHCAMCCTCAGY YCCTGGTCTACADAGTGAGTTCCAGVW YCCTGGTYYWSAGWGTGAGKTCMASSWCAGY Direction: Forward Position #: 6 Overlap #: 22 Alignment: -----KTKSTGAGYKKGAGRHCAMCCTCAGY YCCTGGTCTACADAGTGAGTTCCAGVW---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C036 Combined Motif Reverse Complement Original Motif KCTGWSSTRGARCTCACWCTSWMKACCAGGM MKAGMKMGAGAKMKAGMK KCTGWSVTRGMDCKMRHTMTVDMKACCAGGM Direction: Forward Position #: 7 Overlap #: 18 Alignment: KCTGWSSTRGARCTCACWCTSWMKACCAGGM ------MKAGMKMGAGAKMKAGMK------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C132 Original Motif Original Motif KCTGWSVTRGMDCKMRHTMTVDMKACCAGGM WCAGRGWGAGAWCYAGGW DCWGDGHKAGADCBAGVDMTVDMKACCAGGM Direction: Forward Position #: 1 Overlap #: 18 Alignment: KCTGWSVTRGMDCKMRHTMTVDMKACCAGGM WCAGRGWGAGAWCYAGGW------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 66 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C066 C141 Original Motif Original Motif MAMTCCCMSKGCCTCTK YMATCCYRSYRCTTGKR HAMTCCYVSTRCYTSTD Direction: Backward Position #: 1 Overlap #: 17 Alignment: MAMTCCCMSKGCCTCTK YMATCCYRSYRCTTGKR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Original Motif Original Motif HAMTCCYVSTRCYTSTD GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC HAMKCCYCBBVCYBCYBCCCCCCSSCCCCCSSC Direction: Forward Position #: 4 Overlap #: 14 Alignment: HAMTCCYVSTRCYTSTD---------------- ---GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C012 Original Motif Reverse Complement HAMKCCYCBBVCYBCYBCCCCCCSSCCCCCSSC YRTCTCTCTCTRYCTCTRR YVHMTCYCHCTVCCTCYVVCCCCCSSCCCCCSSC Direction: Forward Position #: 2 Overlap #: 18 Alignment: -HAMKCCYCBBVCYBCYBCCCCCCSSCCCCCSSC YRTCTCTCTCTRYCTCTRR--------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C140 Combined Motif Reverse Complement Reverse Complement GSSGGGGGSSGGGGGVVMGAGGVAGHGKGARHBM CVDMGGBSSSVGBGGSB GSVVGGGGSSGGGGGBBMGAGGVAGHGKGARHBM Direction: Forward Position #: 1 Overlap #: 17 Alignment: GSSGGGGGSSGGGGGVVMGAGGVAGHGKGARHBM CVDMGGBSSSVGBGGSB----------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C017 Original Motif Original Motif GSVVGGGGSSGGGGGBBMGAGGVAGHGKGARHBM WSWGAGASWSAGAGASWS DSDSRGRGVSRGRGRSDVGAGGVAGHGKGARHBM Direction: Forward Position #: 1 Overlap #: 18 Alignment: GSVVGGGGSSGGGGGBBMGAGGVAGHGKGARHBM WSWGAGASWSAGAGASWS---------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 67 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C067 C010 Original Motif Original Motif WDAAAAAARKAAAD WWWAAAAWWAAAAAAAAAAWW WWWAAAAWWAAAAAAADAAWW Direction: Forward Position #: 8 Overlap #: 14 Alignment: -------WDAAAAAARKAAAD WWWAAAAWWAAAAAAAAAAWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C043 Reverse Complement Reverse Complement WWTTDTTTTTTTWWTTTTWWW WATTMTTTTTTWTTWW WWTTHTTTTTTTTTTTTTWWW Direction: Forward Position #: 1 Overlap #: 16 Alignment: WWTTDTTTTTTTWWTTTTWWW WATTMTTTTTTWTTWW----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C131 Original Motif Reverse Complement WWTTHTTTTTTTTTTTTTWWW WWTTHBKTTDTTWW WWTTHBTTTTTTWWTTTTTWWW Direction: Forward Position #: 2 Overlap #: 13 Alignment: -WWTTHTTTTTTTTTTTTTWWW WWTTHBKTTDTTWW-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C079 Combined Motif Reverse Complement Original Motif WWWAAAAAWWAAAAAAVHAAWW ADAAAKWAAAAWAKARW WWWAHAAADWAAAAAADAAAWW Direction: Forward Position #: 4 Overlap #: 17 Alignment: WWWAAAAAWWAAAAAAVHAAWW ---ADAAAKWAAAAWAKARW-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C080 Combined Motif Original Motif Original Motif WWWAHAAADWAAAAAADAAAWW WWAAVAAMMHAAWW WWWAWAAADAAAMAAADWAAWW Direction: Forward Position #: 5 Overlap #: 14 Alignment: WWWAHAAADWAAAAAADAAAWW ----WWAAVAAMMHAAWW---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 68 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C068 C050 Original Motif Original Motif BGCYKCTGCMTCCM CBGCCKCYSCCTCYMG GBGCCKCTGCMTCCMC Direction: Backward Position #: 2 Overlap #: 14 Alignment: -BGCYKCTGCMTCCM- CBGCCKCYSCCTCYMG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C014 Original Motif Reverse Complement GBGCCKCTGCMTCCMC SYGCCTCTGCCTCCSK SYGCCKCTGCCTCCVB Direction: Forward Position #: 1 Overlap #: 16 Alignment: GBGCCKCTGCMTCCMC SYGCCTCTGCCTCCSK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C022 Original Motif Original Motif SYGCCKCTGCCTCCVB BGCCYCBGSCYCCCSVS BBSCYYCBSCCYCCVVS Direction: Forward Position #: 1 Overlap #: 16 Alignment: SYGCCKCTGCCTCCVB- BGCCYCBGSCYCCCSVS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C041 Original Motif Reverse Complement BBSCYYCBSCCYCCVVS SSTGCCTYRGCCTCSG SSBSCCYBVSCCYCSSS Direction: Forward Position #: 1 Overlap #: 16 Alignment: BBSCYYCBSCCYCCVVS SSTGCCTYRGCCTCSG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C086 Reverse Complement Original Motif SSSGMGGSVBMGGSVSS CSGGAGKCWGMGGSASG CSGGAGKCHGMGGSVSG Direction: Forward Position #: 1 Overlap #: 17 Alignment: SSSGMGGSVBMGGSVSS CSGGAGKCWGMGGSASG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 69 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C069 C030 Reverse Complement Reverse Complement DHTTYTTMDWMTTYTTHT YTWTTTTTTTTYTTTTTMW YHWTTYTTHTTHTTTTTHW Direction: Forward Position #: 2 Overlap #: 18 Alignment: -DHTTYTTMDWMTTYTTHT YTWTTTTTTTTYTTTTTMW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C010 Combined Motif Reverse Complement Original Motif WHAAAAAHAAHAAMAAWHM WWWAAAAWWAAAAAAAAAAWW WHAAWAAMAAWWAAAAAAAAAAWW Direction: Forward Position #: 4 Overlap #: 16 Alignment: WHAAAAAHAAHAAMAAWHM----- ---WWWAAAAWWAAAAAAAAAAWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C001 Original Motif Original Motif WHAAWAAMAAWWAAAAAAAAAAWW WWWAAAAAWWAAAAAWAAAAAWWAAAAHWW WWWAAAAWAWWAAAAAAAAAAAAAAAAAWW Direction: Forward Position #: 7 Overlap #: 24 Alignment: ------WHAAWAAMAAWWAAAAAAAAAAWW WWWAAAAAWWAAAAAWAAAAAWWAAAAHWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C016 Combined Motif Original Motif Original Motif WWWAAAAWAWWAAAAAAAAAAAAAAAAAWW HWAAWAAAHWAAMAWAMAAWW WWWAAAWWAAWAAAMWAAAAWAAAAAAAWW Direction: Forward Position #: 7 Overlap #: 21 Alignment: WWWAAAAWAWWAAAAAAAAAAAAAAAAAWW ------HWAAWAAAHWAAMAWAMAAWW--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C032 Combined Motif Original Motif Original Motif WWWAAAWWAAWAAAMWAAAAWAAAAAAAWW HWAAWYDAAAMWRWAMWR WWAAWWDAAAMAAAAAWAAAWAAAAAAAWW Direction: Forward Position #: 1 Overlap #: 18 Alignment: WWWAAAWWAAWAAAMWAAAAWAAAAAAAWW HWAAWYDAAAMWRWAMWR------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 70 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C070 C017 Original Motif Original Motif GVGABAGAVAGASVK WSWGAGASWSAGAGASWS WSWGRGASASAGAGASDB Direction: Forward Position #: 4 Overlap #: 15 Alignment: ---GVGABAGAVAGASVK WSWGAGASWSAGAGASWS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C012 Combined Motif Reverse Complement Reverse Complement BDSTCTCTSTSTCKCWSW YRTCTCTCTCTRYCTCTRR BDSTVTCTCTCTCTVTCTCTRR Direction: Forward Position #: 4 Overlap #: 15 Alignment: BDSTCTCTSTSTCKCWSW---- ---YRTCTCTCTCTRYCTCTRR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C028 Combined Motif Reverse Complement Reverse Complement MKAGAGAVAGAGAGAGAVASDB VBTSVCTSTGSSTCVB MKAGVSWSRSWSWGRSWSVSDB Direction: Forward Position #: 5 Overlap #: 16 Alignment: MKAGAGAVAGAGAGAGAVASDB ----VBTSVCTSTGSSTCVB-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C011 Reverse Complement Original Motif BDSBSWSKCWSWSKSWSBCTRR KMGAGAKMGAGAGAGAKM BHSDGABHSASASDSABHCTRR Direction: Forward Position #: 1 Overlap #: 18 Alignment: BDSBSWSKCWSWSKSWSBCTRR KMGAGAKMGAGAGAGAKM---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C055 Combined Motif Original Motif Original Motif BHSDGABHSASASDSABHCTRR MKAGAGMKMKAGAGMK BHSHGAGDGAKAKAGAGMBTRR Direction: Forward Position #: 4 Overlap #: 16 Alignment: BHSDGABHSASASDSABHCTRR ---MKAGAGMKMKAGAGMK--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 71 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C071 C037 Original Motif Original Motif SVCCACSVSCACCBS SVCCGBCMCCSYCMCCVB SVCCVCCMCCVSCACCVS Direction: Forward Position #: 4 Overlap #: 15 Alignment: ---SVCCACSVSCACCBS SVCCGBCMCCSYCMCCVB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C140 Original Motif Original Motif SVCCVCCMCCVSCACCVS BSCCBCVSSSBCCYHVG SBCCBCCVCSBCCHCCVS Direction: Forward Position #: 1 Overlap #: 17 Alignment: SVCCVCCMCCVSCACCVS BSCCBCVSSSBCCYHVG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C058 Combined Motif Original Motif Original Motif SBCCBCCVCSBCCHCCVS CYCCBCSGVCYCCBC SBCCBCCVCSSSCYCCBS Direction: Forward Position #: 4 Overlap #: 15 Alignment: SBCCBCCVCSBCCHCCVS ---CYCCBCSGVCYCCBC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C003 Original Motif Original Motif SBCCBCCVCSSSCYCCBS GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC GSCYCHSBCYBCCBCSSCCCBCCCCCCSSC Direction: Forward Position #: 7 Overlap #: 18 Alignment: ------SBCCBCCVCSSSCYCCBS------ GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C077 Combined Motif Reverse Complement Reverse Complement GSSGGGGGGBGGGSSGBGGBKGBSHGKGSC BGGGGGSSCCGGGGBS GSGGGGGGSSVGGGGBVGGBKGBSHGKGSC Direction: Forward Position #: 2 Overlap #: 16 Alignment: GSSGGGGGGBGGGSSGBGGBKGBSHGKGSC -BGGGGGSSCCGGGGBS------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 72 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C072 C015 Reverse Complement Original Motif WGCCHVGGCTWS DVAGCCWKGGCTACAVAGCK DVAGCCWGSSCBRSMBAGCK Direction: Forward Position #: 7 Overlap #: 12 Alignment: ------WGCCHVGGCTWS-- DVAGCCWKGGCTACAVAGCK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C073 Reverse Complement Original Motif RGCTVRSKVGSSCWGGCTVD YMWGSMYAGCCRKSKCTR YMWGGCTAGSBRGSGCTGGCTVD Direction: Forward Position #: 4 Overlap #: 15 Alignment: ---RGCTVRSKVGSSCWGGCTVD YMWGSMYAGCCRKSKCTR----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C045 Reverse Complement Reverse Complement DVAGCCAGCSCKBSCTAGCCWYK MKAGYCYRGRCTKK HBAGCCHGBVCKKBCTAGCCWYK Direction: Forward Position #: 1 Overlap #: 14 Alignment: DVAGCCAGCSCKBSCTAGCCWYK MKAGYCYRGRCTKK--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C041 Original Motif Reverse Complement HBAGCCHGBVCKKBCTAGCCWYK SSTGCCTYRGCCTCSG VSHGCCDBDGCBKCCBAGCCWYK Direction: Forward Position #: 1 Overlap #: 16 Alignment: HBAGCCHGBVCKKBCTAGCCWYK SSTGCCTYRGCCTCSG------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C114 Original Motif Reverse Complement VSHGCCDBDGCBKCCBAGCCWYK SMAGACRRGGMTKS VVAGMCDDGGCTKSCBAGCCWYK Direction: Forward Position #: 1 Overlap #: 14 Alignment: VSHGCCDBDGCBKCCBAGCCWYK SMAGACRRGGMTKS--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 73 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C073 C005 Original Motif Reverse Complement YMWGSMYAGCCRKSKCTR WCKAGGCCAGCCTGGYCTACAGA ABVHSVSCMKSSDSBRCWRWCKA Direction: Backward Position #: 2 Overlap #: 18 Alignment: ----YMWGSMYAGCCRKSKCTR- WCKAGGCCAGCCTGGYCTACAGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C035 Reverse Complement Reverse Complement TYGWMWGKVSDSSYRGSBSDVBT WWTTTMYAGACRKGGTWW WWTTKHHAGACVDGGTDDSBSDVBT Direction: Forward Position #: 3 Overlap #: 16 Alignment: --TYGWMWGKVSDSSYRGSBSDVBT WWTTTMYAGACRKGGTWW------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C015 Reverse Complement Reverse Complement ABVHSVSHDACCHVGTCTDHRAAWW RGCTVTGTAGCCYWGGCTVD AGCTSHGTARCCYHGKCTDHRAAWW Direction: Forward Position #: 1 Overlap #: 20 Alignment: ABVHSVSHDACCHVGTCTDHRAAWW RGCTVTGTAGCCYWGGCTVD----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C012 Original Motif Reverse Complement AGCTSHGTARCCYHGKCTDHRAAWW YRTCTCTCTCTRYCTCTRR YRTMKCTCTSTRBCYCHRRCTDHRAAWW Direction: Forward Position #: 4 Overlap #: 16 Alignment: ---AGCTSHGTARCCYHGKCTDHRAAWW YRTCTCTCTCTRYCTCTRR--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Reverse Complement Reverse Complement WWTTKHHAGMMHGMGBKASAGAGRRAKM GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC WWTTGVVRGBSDGVGGKRSDGDGVVRKVHGKGSC Direction: Forward Position #: 5 Overlap #: 24 Alignment: WWTTKHHAGMMHGMGBKASAGAGRRAKM------ ----GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 74 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C074 C005 Reverse Complement Reverse Complement SRSGCCWGCCTGG WCKAGGCCAGCCTGGYCTACAGA YCTACAGABAGGCCAGCCTGGWC Direction: Backward Position #: 9 Overlap #: 13 Alignment: --SRSGCCWGCCTGG-------- WCKAGGCCAGCCTGGYCTACAGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C122 Original Motif Original Motif YCTACAGABAGGCCAGCCTGGWC YAGCCCWGSCWSBCCTR YHSYMCAGVCASGCCWGCCTGGWC Direction: Forward Position #: 2 Overlap #: 16 Alignment: -YCTACAGABAGGCCAGCCTGGWC YAGCCCWGSCWSBCCTR------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C109 Original Motif Reverse Complement YHSYMCAGVCASGCCWGCCTGGWC MRGGSCAGCSWGRK HDGBSCAGCSWGRYCWGCCTGGWC Direction: Forward Position #: 1 Overlap #: 14 Alignment: YHSYMCAGVCASGCCWGCCTGGWC MRGGSCAGCSWGRK---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C126 Combined Motif Reverse Complement Reverse Complement GWCCAGGCWGKMCWSGCTGSBCDD SMCCAGSYYSGMCWBS GWCCAGGCHRGSCTSGCYKBSCDD Direction: Forward Position #: 6 Overlap #: 16 Alignment: GWCCAGGCWGKMCWSGCTGSBCDD -----SMCCAGSYYSGMCWBS--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C096 Reverse Complement Original Motif HDGSBYKGCSAGSCKDGCCTGGWC MRMCMYGSCYRGCCYK MRVCHYKGCYDGVCBKGCCTGGWC Direction: Forward Position #: 1 Overlap #: 16 Alignment: HDGSBYKGCSAGSCKDGCCTGGWC MRMCMYGSCYRGCCYK-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 75 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C075 C061 Original Motif Original Motif MGGCAGMSGCAGSCK MRGMMBAGGCHGGCCK MGGCMGAGGCAGGCBK Direction: Forward Position #: 1 Overlap #: 15 Alignment: MGGCAGMSGCAGSCK- MRGMMBAGGCHGGCCK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C101 Reverse Complement Original Motif RVGCCTGCCTCYGCCY YTSCCTSKSVSTCCCAR HHGCCTGBSHSTSCCHR Direction: Forward Position #: 1 Overlap #: 16 Alignment: RVGCCTGCCTCYGCCY- YTSCCTSKSVSTCCCAR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C105 Combined Motif Reverse Complement Original Motif MHGGSASHSBCAGGCHH TGCCKMBSCCKMCCVA MHKGCMKMSSCMGVCHHA Direction: Forward Position #: 3 Overlap #: 15 Alignment: MHGGSASHSBCAGGCHH- --TGCCKMBSCCKMCCVA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C093 Reverse Complement Reverse Complement TDDGVCRGSSRYRGCRHR ARGCASYGGSVYSTGGYT WDGSVSBGGSVYGBSVHD Direction: Forward Position #: 1 Overlap #: 18 Alignment: TDDGVCRGSSRYRGCRHR ARGCASYGGSVYSTGGYT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C012 Combined Motif Reverse Complement Reverse Complement DHVSBCKVSCCBSBSCHW YRTCTCTCTCTRYCTCTRR DHVBVBBHSYCTSTVYCTCTRR Direction: Forward Position #: 4 Overlap #: 15 Alignment: DHVSBCKVSCCBSBSCHW---- ---YRTCTCTCTCTRYCTCTRR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 76 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C076 C093 Original Motif Original Motif ASCTRCCTCYBCSB AKCCASMBSCCKSTGCMT ASCBGCCKCYGCVTAKCC Direction: Backward Position #: 1 Overlap #: 14 Alignment: ----ASCTRCCTCYBCSB AKCCASMBSCCKSTGCMT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C048 Combined Motif Reverse Complement Original Motif GGYTAVGCMGRGGCVGST SGAGGCWSWGGCAGSC GGBKAGGCWSAGGCAGSB Direction: Forward Position #: 3 Overlap #: 16 Alignment: GGYTAVGCMGRGGCVGST --SGAGGCWSWGGCAGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C054 Reverse Complement Original Motif VSCTGCCTSWGCCTYBCC SSCCDCCCCCCCSS SSCYGCCHCHSCSBYBCC Direction: Forward Position #: 1 Overlap #: 14 Alignment: VSCTGCCTSWGCCTYBCC SSCCDCCCCCCCSS---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C075 Combined Motif Original Motif Reverse Complement SSCYGCCHCHSCSBYBCC YGSCTGCSYCTGCCY SSCYGCCTSCSYCTSSCY Direction: Forward Position #: 4 Overlap #: 15 Alignment: SSCYGCCHCHSCSBYBCC ---YGSCTGCSYCTGCCY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C085 Original Motif Reverse Complement SSCYGCCTSCSYCTSSCY SKCSVHMTCTDBSKCSV SBCBGCCTSYVYSKCSSY Direction: Forward Position #: 1 Overlap #: 17 Alignment: SSCYGCCTSCSYCTSSCY SKCSVHMTCTDBSKCSV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 77 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C077 C022 Original Motif Original Motif SBCCCCGGSSCCCCCB BGCCYCBGSCYCCCSVS SBGCCYCVGSCYCCCCV Direction: Backward Position #: 2 Overlap #: 16 Alignment: SBCCCCGGSSCCCCCB- BGCCYCBGSCYCCCSVS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C140 Combined Motif Original Motif Original Motif SBGCCYCVGSCYCCCCV BSCCBCVSSSBCCYHVG SBGYBCCBSSSSCCCCHHVG Direction: Forward Position #: 4 Overlap #: 14 Alignment: SBGCCYCVGSCYCCCCV--- ---BSCCBCVSSSBCCYHVG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C004 Combined Motif Original Motif Original Motif SBGYBCCBSSSSCCCCHHVG SSSSSCSSSSSCCSSSSCCSCSSSSSS SSSSSCCSSSSCCSCCBCCSCSSSSSS Direction: Forward Position #: 1 Overlap #: 20 Alignment: SBGYBCCBSSSSCCCCHHVG------- SSSSSCSSSSSCCSSSSCCSCSSSSSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C003 Original Motif Original Motif SSSSSCCSSSSCCSCCBCCSCSSSSSS GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC GSCYCHSSCYBCCBCCCCCCSCCCCCCSSCSSS Direction: Forward Position #: 7 Overlap #: 24 Alignment: ------SSSSSCCSSSSCCSCCBCCSCSSSSSS GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C020 Combined Motif Reverse Complement Reverse Complement SSSGSSGGGGGGSGGGGGGBGGBKGSSHGKGSC SGTGGGSGVGGSGGVGSB SSBGGGSGGGGSGGGGSSGBGGBKGSSHGKGSC Direction: Forward Position #: 1 Overlap #: 18 Alignment: SSSGSSGGGGGGSGGGGGGBGGBKGSSHGKGSC SGTGGGSGVGGSGGVGSB--------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 78 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C078 C025 Original Motif Original Motif YRGAYAGAGRGAYR KMGAKAGAGMGAKM KMGAKAGAGMGAKM Direction: Backward Position #: 1 Overlap #: 14 Alignment: YRGAYAGAGRGAYR KMGAKAGAGMGAKM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C012 Combined Motif Reverse Complement Reverse Complement YRTCYCTCTRTCYR YRTCTCTCTCTRYCTCTRR YRTVTCTCTMTCTRYCTCTRR Direction: Forward Position #: 3 Overlap #: 12 Alignment: YRTCYCTCTRTCYR------- --YRTCTCTCTCTRYCTCTRR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C070 Combined Motif Reverse Complement Original Motif MKAGAGMKAGARAGAGAVAKM GVGABAGAVAGASVK MKAGRGMBAGAVAGAGVBAKM Direction: Forward Position #: 4 Overlap #: 15 Alignment: MKAGAGMKAGARAGAGAVAKM ---GVGABAGAVAGASVK--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C017 Combined Motif Reverse Complement Reverse Complement YRTBBCTCTVTCTVYCKCTRR SWSTCTCTSWSTCTCWSW YVTSTCTCTSTCTCTCTSTRR Direction: Forward Position #: 2 Overlap #: 18 Alignment: YRTBBCTCTVTCTVYCKCTRR -SWSTCTCTSWSTCTCWSW-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C011 Combined Motif Original Motif Reverse Complement YVTSTCTCTSTCTCTCTSTRR RRTCTCTCTCRRTCTCRR DRTCTCTCTCDVTCTCDVTRR Direction: Forward Position #: 1 Overlap #: 18 Alignment: YVTSTCTCTSTCTCTCTSTRR RRTCTCTCTCRRTCTCRR--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 79 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C079 C024 Reverse Complement Reverse Complement WKTRTWTTTTWRTTTDT THTTDMWTTTTWKMTTDA WTTDHWTTTTWDHTTDHT Direction: Backward Position #: 1 Overlap #: 17 Alignment: -WKTRTWTTTTWRTTTDT THTTDMWTTTTWKMTTDA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C016 Combined Motif Reverse Complement Original Motif AHDAAHDWAAAAWHDAAW HWAAWAAAHWAAMAWAMAAWW AHDHAAAWAAAAWAAAAWAMAAWW Direction: Forward Position #: 4 Overlap #: 15 Alignment: AHDAAHDWAAAAWHDAAW------ ---HWAAWAAAHWAAMAWAMAAWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C097 Reverse Complement Reverse Complement WWTTYTWTTTTWTTTTWTTTHDHT WVTTSWWTTTTWWSTTBW WDTTBTWTTTTWWBTTDWTTHDHT Direction: Forward Position #: 1 Overlap #: 18 Alignment: WWTTYTWTTTTWTTTTWTTTHDHT WVTTSWWTTTTWWSTTBW------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C001 Combined Motif Original Motif Reverse Complement WDTTBTWTTTTWWBTTDWTTHDHT WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW WDTTBWWTTTTTWHTTTTTWTTTTTWWTTTTTWWW Direction: Forward Position #: 6 Overlap #: 19 Alignment: WDTTBTWTTTTWWBTTDWTTHDHT----------- -----WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C030 Combined Motif Reverse Complement Original Motif WWWAAAAAWWAAAAAWAAAAAHWAAAAAWWBAADW WYAAAAAMAAAAAAAAWAM WWAAAAAAAAAAAAAAWAAAAHWAAAAAWWBAADW Direction: Forward Position #: 1 Overlap #: 19 Alignment: WWWAAAAAWWAAAAAWAAAAAHWAAAAAWWBAADW WYAAAAAMAAAAAAAAWAM---------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 80 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C080 C131 Original Motif Original Motif WWAAVAAMMHAAWW WWAADAARVHAAWW WWAADAAAVHAAWW Direction: Forward Position #: 1 Overlap #: 14 Alignment: WWAAVAAMMHAAWW WWAADAARVHAAWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C016 Combined Motif Reverse Complement Reverse Complement WWTTHBTTTDTTWW WWTTYTWTYTTWDTTTWTTWH WWTTHTYTTTTTTWDTTTWTTWH Direction: Forward Position #: 3 Overlap #: 12 Alignment: WWTTHBTTTDTTWW--------- --WWTTYTWTYTTWDTTTWTTWH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C030 Combined Motif Original Motif Reverse Complement WWTTHTYTTTTTTWDTTTWTTWH YTWTTTTTTTTYTTTTTMW WWTTWTTTTTTTTTKTTTTHTWH Direction: Forward Position #: 3 Overlap #: 19 Alignment: WWTTHTYTTTTTTWDTTTWTTWH --YTWTTTTTTTTYTTTTTMW-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C098 Original Motif Reverse Complement WWTTWTTTTTTTTTKTTTTHTWH HWTTWWTTYTWWTTTT WWTTWTTTTTTTTTTTTTTHTWH Direction: Forward Position #: 1 Overlap #: 16 Alignment: WWTTWTTTTTTTTTKTTTTHTWH HWTTWWTTYTWWTTTT------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C001 Reverse Complement Original Motif HWAHAAAAAAAAAAAAAAWAAWW WWWAAAAAWWAAAAAWAAAAAWWAAAAHWW WWWAAAWWAWAAAAAAAAAAAAAAAAAWWW Direction: Forward Position #: 7 Overlap #: 23 Alignment: ------HWAHAAAAAAAAAAAAAAWAAWW- WWWAAAAAWWAAAAAWAAAAAWWAAAAHWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 81 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C081 C054 Original Motif Original Motif BCCSHCCCSCMG SSCCDCCCCCCCSS SSCCVHCCCCCMSS Direction: Forward Position #: 2 Overlap #: 12 Alignment: -BCCSHCCCSCMG- SSCCDCCCCCCCSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Reverse Complement Reverse Complement SSRGGGGGDVGGSS GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC SSGGSGGGGSGGGGGGGGKGGVMGGSHGKGSC Direction: Forward Position #: 3 Overlap #: 12 Alignment: SSRGGGGGDVGGSS------------------ --GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C059 Combined Motif Original Motif Reverse Complement SSGGSGGGGSGGGGGGGGKGGVMGGSHGKGSC CMGGGGGDGGKS SSSSGGGGGBGGGGGGGGKGGVMGGSHGKGSC Direction: Forward Position #: 3 Overlap #: 12 Alignment: SSGGSGGGGSGGGGGGGGKGGVMGGSHGKGSC --CMGGGGGDGGKS------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C023 Original Motif Reverse Complement SSSSGGGGGBGGGGGGGGKGGVMGGSHGKGSC SSGGSGDBGSGGSS SSSGSGGGGSDGGSGGGGGKGGVMGGSHGKGSC Direction: Forward Position #: 2 Overlap #: 13 Alignment: -SSSSGGGGGBGGGGGGGGKGGVMGGSHGKGSC SSGGSGDBGSGGSS------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C008 Combined Motif Original Motif Reverse Complement SSSGSGGGGSDGGSGGGGGKGGVMGGSHGKGSC SSGGSSGGGGSSGGSS SSSGSGGSSGGGSGGGGSGGGGVMGGSHGKGSC Direction: Forward Position #: 8 Overlap #: 16 Alignment: SSSGSGGGGSDGGSGGGGGKGGVMGGSHGKGSC -------SSGGSSGGGGSSGGSS---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 82 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C082 C056 Reverse Complement Reverse Complement WTTKTTTMTTTYW HWTTYTKWMTTTYWT HWTTTTTTMTTTYWT Direction: Forward Position #: 2 Overlap #: 13 Alignment: -WTTKTTTMTTTYW- HWTTYTKWMTTTYWT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C030 Combined Motif Reverse Complement Original Motif AWMAAARAAAAAAWH WYAAAAAMAAAAAAAAWAM AWHAAARAAAAAAWHAAAWAM Direction: Forward Position #: 3 Overlap #: 13 Alignment: AWMAAARAAAAAAWH------ --WYAAAAAMAAAAAAAAWAM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C010 Original Motif Original Motif AWHAAARAAAAAAWHAAAWAM WWWAAAAWWAAAAAAAAAAWW WWWAAAAWWAAAAAAAAAWWH Direction: Forward Position #: 1 Overlap #: 21 Alignment: AWHAAARAAAAAAWHAAAWAM WWWAAAAWWAAAAAAAAAAWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C001 Reverse Complement Reverse Complement HWWTTTTTTTTTWWTTTTWWW WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW WWHTTTTWWTTTTTTTTTTWTTTTTTTWWW Direction: Forward Position #: 7 Overlap #: 21 Alignment: ------HWWTTTTTTTTTWWTTTTWWW--- WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C152 Reverse Complement Original Motif WWWAAAAAAAWAAAAAAAAAAWWAAAAHWW KWRRKWRARAWMRAWM KWWADWAAAAAADAAAAAAAAAAWWAAAAHWW Direction: Forward Position #: 3 Overlap #: 14 Alignment: --WWWAAAAAAAWAAAAAAAAAAWWAAAAHWW KWRRKWRARAWMRAWM---------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 83 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C083 C050 Original Motif Original Motif CKBCCTSYRSCTCMMG CBGCCKCYSCCTCYMG CDGCCTCYGCCTCCMG Direction: Backward Position #: 1 Overlap #: 16 Alignment: CKBCCTSYRSCTCMMG CBGCCKCYSCCTCYMG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C101 Combined Motif Reverse Complement Reverse Complement CYGGAGGCMGAGGCDG MTGGGASVSYSAGGSAK CYGVWGGSASRGBSAGGSAK Direction: Forward Position #: 4 Overlap #: 13 Alignment: CYGGAGGCMGAGGCDG---- ---MTGGGASVSYSAGGSAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C086 Original Motif Original Motif CYGVWGGSASRGBSAGGSAK CSGGAGKCWGMGGSASG CBGSAGKCAGMGGSAGGSAK Direction: Forward Position #: 1 Overlap #: 17 Alignment: CYGVWGGSASRGBSAGGSAK CSGGAGKCWGMGGSASG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C014 Combined Motif Reverse Complement Reverse Complement YTSCCTSCCYCTGYCTSCBG SYGCCTCTGCCTCCSK YTSCCYGCCTCTGCCTCCBG Direction: Forward Position #: 5 Overlap #: 16 Alignment: YTSCCTSCCYCTGYCTSCBG ----SYGCCTCTGCCTCCSK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C012 Combined Motif Reverse Complement Original Motif CBGGAGGCAGAGGCMGGSAK MKAGAGMKAGAGAGAGAKM CBGGAGRSAGMGRSAGRSAGAKM Direction: Forward Position #: 5 Overlap #: 16 Alignment: CBGGAGGCAGAGGCMGGSAK--- ----MKAGAGMKAGAGAGAGAKM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 84 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C084 C076 Original Motif Original Motif SCTGCMKCTGCVB ASCTRCCTCYBCSB SCTGCCKCYGCSBA Direction: Backward Position #: 1 Overlap #: 13 Alignment: -SCTGCMKCTGCVB ASCTRCCTCYBCSB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C075 Original Motif Reverse Complement SCTGCCKCYGCSBA YGSCTGCSYCTGCCY YGSCTGCCTCTGCCHA Direction: Forward Position #: 3 Overlap #: 13 Alignment: --SCTGCCKCYGCSBA YGSCTGCSYCTGCCY- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C118 Reverse Complement Reverse Complement THGGCAGAGGCAGSCK GRGGCASWSGCAGYC KVGGCAGASGCAGBCK Direction: Forward Position #: 1 Overlap #: 15 Alignment: THGGCAGAGGCAGSCK GRGGCASWSGCAGYC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C106 Reverse Complement Original Motif YGBCTGCSTCTGCCBY MSGCAGWGGCASK MSGCWGHGDCWGBCBY Direction: Forward Position #: 1 Overlap #: 13 Alignment: YGBCTGCSTCTGCCBY MSGCAGWGGCASK--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C060 Reverse Complement Original Motif KVGBCWGHCDCWGCSR SMGGCAKMGGCAKS SMGGCAGMSGCAGCSR Direction: Forward Position #: 1 Overlap #: 14 Alignment: KVGBCWGHCDCWGCSR SMGGCAKMGGCAKS-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 85 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C085 C012 Reverse Complement Reverse Complement SKCSVHMTCTDBSKCSV YRTCTCTCTCTRYCTCTRR RVTCBBYCTCTRYCTCBRY Direction: Backward Position #: 2 Overlap #: 17 Alignment: -SKCSVHMTCTDBSKCSV- YRTCTCTCTCTRYCTCTRR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C037 Reverse Complement Reverse Complement MMBGAGKMAGAGMBVGAVM BVGGYGKSGGYGBCGGVS VVGGHGKMRGHGVVRGVSM Direction: Forward Position #: 1 Overlap #: 18 Alignment: MMBGAGKMAGAGMBVGAVM BVGGYGKSGGYGBCGGVS- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C004 Combined Motif Reverse Complement Original Motif RSBCMVVCHCKRYCHCCVV SSSSSCSSSSSCCSSSSCCSCSSSSSS RSBCSSSCBCBSCCBCSSSSCCSCSSSSSS Direction: Forward Position #: 4 Overlap #: 16 Alignment: RSBCMVVCHCKRYCHCCVV----------- ---SSSSSCSSSSSCCSSSSCCSCSSSSSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C034 Combined Motif Original Motif Reverse Complement RSBCSSSCBCBSCCBCSSSSCCSCSSSSSS SCTCTRSCTCCSCAGTGS VCTCBSSCTCBSCMSHGSSSCCSCSSSSSS Direction: Forward Position #: 1 Overlap #: 18 Alignment: RSBCSSSCBCBSCCBCSSSSCCSCSSSSSS SCTCTRSCTCCSCAGTGS------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C011 Combined Motif Original Motif Reverse Complement VCTCBSSCTCBSCMSHGSSSCCSCSSSSSS RRTCTCTCTCRRTCTCRR VCTCBSVVTCYSBCKCGVBSYCVVSSSSSS Direction: Forward Position #: 7 Overlap #: 18 Alignment: VCTCBSSCTCBSCMSHGSSSCCSCSSSSSS ------RRTCTCTCTCRRTCTCRR------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 86 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C086 C037 Reverse Complement Original Motif CSTSCCYCWGRCTCCSG SVCCGBCMCCSYCMCCVB SVYCSCCCCSRCYMCCGB Direction: Forward Position #: 1 Overlap #: 17 Alignment: CSTSCCYCWGRCTCCSG- SVCCGBCMCCSYCMCCVB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C107 Original Motif Original Motif SVYCSCCCCSRCYMCCGB CHBBCCTYBAABCCCDG CVYBCCYBHVRCCCCVGB Direction: Forward Position #: 1 Overlap #: 17 Alignment: SVYCSCCCCSRCYMCCGB CHBBCCTYBAABCCCDG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Reverse Complement Reverse Complement BCVGGGGKBDBKGGBKVG GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC BCVGGGGKGGGBGGGGGGGKGGVMGGSHGKGSC Direction: Forward Position #: 4 Overlap #: 15 Alignment: BCVGGGGKBDBKGGBKVG--------------- ---GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C004 Combined Motif Reverse Complement Original Motif GSCYCHSCCYVCCYCCCCCCCBCCCYCCCCVGB SSSSSCSSSSSCCSSSSCCSCSSSSSS GSCYCHSSCBSCCCSCCCCCSSCCCCSCCCSSSS Direction: Forward Position #: 8 Overlap #: 26 Alignment: GSCYCHSCCYVCCYCCCCCCCBCCCYCCCCVGB- -------SSSSSCSSSSSCCSSSSCCSCSSSSSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C017 Combined Motif Original Motif Reverse Complement GSCYCHSSCBSCCCSCCCCCSSCCCCSCCCSSSS SWSTCTCTSWSTCTCWSW GSCYCHSSHSBCYCBCHSYCBCHSHCSCCCSSSS Direction: Forward Position #: 8 Overlap #: 18 Alignment: GSCYCHSSCBSCCCSCCCCCSSCCCCSCCCSSSS -------SWSTCTCTSWSTCTCWSW--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 87 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C087 C005 Original Motif Original Motif WRGACCRSSYTGGCYW TCTGTAGMCCAGGCTGGCCTYGW TCTGTAGMCCAGGCTGGCCTYGW Direction: Forward Position #: 5 Overlap #: 16 Alignment: ----WRGACCRSSYTGGCYW--- TCTGTAGMCCAGGCTGGCCTYGW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C122 Original Motif Reverse Complement TCTGTAGMCCAGGCTGGCCTYGW MAGGVSWGSCWGGGCTK MWSKGBAGVCHRGGCTGGCCTYGW Direction: Forward Position #: 2 Overlap #: 16 Alignment: -TCTGTAGMCCAGGCTGGCCTYGW MAGGVSWGSCWGGGCTK------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C061 Combined Motif Original Motif Original Motif MWSKGBAGVCHRGGCTGGCCTYGW MRGMMBAGGCHGGCCK MWSKGHRGMCBRGGCTGGCCTYGW Direction: Forward Position #: 6 Overlap #: 16 Alignment: MWSKGBAGVCHRGGCTGGCCTYGW -----MRGMMBAGGCHGGCCK--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C073 Combined Motif Original Motif Original Motif MWSKGHRGMCBRGGCTGGCCTYGW YMWGSMYAGCCRKSKCTR MWSKBMDGVCHAGSCDGGBCTVGW Direction: Forward Position #: 5 Overlap #: 18 Alignment: MWSKGHRGMCBRGGCTGGCCTYGW ----YMWGSMYAGCCRKSKCTR-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C124 Combined Motif Reverse Complement Reverse Complement WCVAGBCCDGSCTDGVCDYBYSWR WSGASKSCAGCSMSGTSW WCVAGDSBAGKCYAGSCHBGYSWR Direction: Forward Position #: 6 Overlap #: 18 Alignment: WCVAGBCCDGSCTDGVCDYBYSWR -----WSGASKSCAGCSMSGTSW- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 88 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C088 C013 Original Motif Original Motif SKCACTCWGTAGAMS WVCTGGAACTCACTHTGTAGACCAGGM WVCTGGAACTCACTCTGTAGACCAGGM Direction: Forward Position #: 9 Overlap #: 15 Alignment: --------SKCACTCWGTAGAMS---- WVCTGGAACTCACTHTGTAGACCAGGM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C089 Combined Motif Reverse Complement Reverse Complement YCCTGGTCTACAGAGTGAGTTCCAGVW MRGKCTDMKYAGTGRK YCCTRGTCTACDBAGTGRGTTCCAGVW Direction: Forward Position #: 4 Overlap #: 16 Alignment: YCCTGGTCTACAGAGTGAGTTCCAGVW ---MRGKCTDMKYAGTGRK-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C017 Reverse Complement Reverse Complement WVCTGGAACKCACTVDGTAGACMAGGM SWSTCTCTSWSTCTCWSW VHCTSKMWCTCWCTVWGWAGACMAGGM Direction: Forward Position #: 1 Overlap #: 18 Alignment: WVCTGGAACKCACTVDGTAGACMAGGM SWSTCTCTSWSTCTCWSW--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C019 Original Motif Reverse Complement VHCTSKMWCTCWCTVWGWAGACMAGGM CTGCCTCCCAAGTGCTGGGMWR CTBCCTCBMDMKYDCTSKGHAGACMAGGM Direction: Forward Position #: 3 Overlap #: 20 Alignment: --VHCTSKMWCTCWCTVWGWAGACMAGGM CTGCCTCCCAAGTGCTGGGMWR------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C086 Original Motif Reverse Complement CTBCCTCBMDMKYDCTSKGHAGACMAGGM CSTSCCYCWGRCTCCSG CBBVCYYCHGRBTSCKGKGHAGACMAGGM Direction: Forward Position #: 1 Overlap #: 17 Alignment: CTBCCTCBMDMKYDCTSKGHAGACMAGGM CSTSCCYCWGRCTCCSG------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 89 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C089 C013 Original Motif Original Motif YKCACTMYRDAGRCMR WVCTGGAACTCACTHTGTAGACCAGGM WVCTGGAACTCACTHTGTAGACCAGGM Direction: Forward Position #: 9 Overlap #: 16 Alignment: --------YKCACTMYRDAGRCMR--- WVCTGGAACTCACTHTGTAGACCAGGM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C019 Original Motif Original Motif WVCTGGAACTCACTHTGTAGACCAGGM MWYCCCAGCACTTGGGAGGCAG MWHCCYRGMACTCRSKAKGYAGACCAGGM Direction: Forward Position #: 3 Overlap #: 20 Alignment: --WVCTGGAACTCACTHTGTAGACCAGGM MWYCCCAGCACTTGGGAGGCAG------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C083 Original Motif Original Motif MWHCCYRGMACTCRSKAKGYAGACCAGGM CKBCCTSYRSCTCMMG CWBCCYVGVVCTCVVGAKGYAGACCAGGM Direction: Forward Position #: 1 Overlap #: 16 Alignment: MWHCCYRGMACTCRSKAKGYAGACCAGGM CKBCCTSYRSCTCMMG------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C007 Combined Motif Original Motif Original Motif CWBCCYVGVVCTCVVGAKGYAGACCAGGM KTTSTGAGTTCVAGGMCAGCCTS CWBBYTVKGASTYCVARGVCAGMCHVGGM Direction: Forward Position #: 4 Overlap #: 23 Alignment: CWBCCYVGVVCTCVVGAKGYAGACCAGGM ---KTTSTGAGTTCVAGGMCAGCCTS--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C087 Combined Motif Reverse Complement Reverse Complement YCCVDGRCTGVCMTVGMASTCRVAKBVWG WKGCCAMSSKGGTCKW YCCVWGGCYRMSSKGGHMBTCRVAKBVWG Direction: Forward Position #: 5 Overlap #: 16 Alignment: YCCVDGRCTGVCMTVGMASTCRVAKBVWG ----WKGCCAMSSKGGTCKW--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 90 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C090 C098 Reverse Complement Reverse Complement WTWWWDTTTWWTTW HWTTWWTTYTWWTTTT HWTTWWTTTTWWTTWT Direction: Forward Position #: 2 Overlap #: 14 Alignment: -WTWWWDTTTWWTTW- HWTTWWTTYTWWTTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C043 Combined Motif Original Motif Reverse Complement HWTTWWTTTTWWTTWT WATTMTTTTTTWTTWW HWTWWTTYTTTTTTWTTWW Direction: Forward Position #: 4 Overlap #: 13 Alignment: HWTTWWTTTTWWTTWT--- ---WATTMTTTTTTWTTWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C030 Combined Motif Original Motif Reverse Complement HWTWWTTYTTTTTTWTTWW YTWTTTTTTTTYTTTTTMW HWTHHWTTTTTTTTTTTTTTMW Direction: Forward Position #: 4 Overlap #: 16 Alignment: HWTWWTTYTTTTTTWTTWW--- ---YTWTTTTTTTTYTTTTTMW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C001 Combined Motif Original Motif Reverse Complement HWTHHWTTTTTTTTTTTTTTMW WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW HWTHWWTTTTTTTTTTTTTTTTTTWWTTTTTWWW Direction: Forward Position #: 5 Overlap #: 18 Alignment: HWTHHWTTTTTTTTTTTTTTMW------------ ----WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C152 Combined Motif Original Motif Reverse Complement HWTHWWTTTTTTTTTTTTTTTTTTWWTTTTTWWW YWTKYWTKTKWYKKWR HWTBTWTTTTTYTTTDTTTTTTTTWWTTTTTWWW Direction: Forward Position #: 1 Overlap #: 16 Alignment: HWTHWWTTTTTTTTTTTTTTTTTTWWTTTTTWWW YWTKYWTKTKWYKKWR------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 91 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C091 C013 Original Motif Original Motif KMACTCAMKYTGTAKM WVCTGGAACTCACTHTGTAGACCAGGM WVCTGGAACTCACTYTGTAGACCAGGM Direction: Forward Position #: 6 Overlap #: 16 Alignment: -----KMACTCAMKYTGTAKM------ WVCTGGAACTCACTHTGTAGACCAGGM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C047 Combined Motif Original Motif Original Motif WVCTGGAACTCACTYTGTAGACCAGGM TSGAAMTCACTMKGTASA WVCTGGAACTCACTHTGTAGACCAGGM Direction: Forward Position #: 4 Overlap #: 18 Alignment: WVCTGGAACTCACTYTGTAGACCAGGM ---TSGAAMTCACTMKGTASA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C012 Original Motif Reverse Complement WVCTGGAACTCACTHTGTAGACCAGGM YRTCTCTCTCTRYCTCTRR YDBCTSKMWCTVHCTCTGDAGACCAGGM Direction: Forward Position #: 2 Overlap #: 18 Alignment: -WVCTGGAACTCACTHTGTAGACCAGGM YRTCTCTCTCTRYCTCTRR--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C016 Combined Motif Reverse Complement Original Motif YCCTGGTCTDCAGAGHVAGWRYSAGVDM HWAAWAAAHWAAMAWAMAAWW YCCTGGTHWAMADAVWVAVADHVARVWM Direction: Forward Position #: 7 Overlap #: 21 Alignment: YCCTGGTCTDCAGAGHVAGWRYSAGVDM ------HWAAWAAAHWAAMAWAMAAWW- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C129 Combined Motif Original Motif Original Motif YCCTGGTHWAMADAVWVAVADHVARVWM KKGCTAYRYRGAGAMM YCBTGSTAYRYAGAGAMAVADHVARVWM Direction: Forward Position #: 3 Overlap #: 16 Alignment: YCCTGGTHWAMADAVWVAVADHVARVWM --KKGCTAYRYRGAGAMM---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 92 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C092 C128 Reverse Complement Reverse Complement KKTCGMSGCCASKCTGMM SKTCSMSGACASKSAGMS BKTCGMSGMCASKCWGMM Direction: Backward Position #: 1 Overlap #: 18 Alignment: KKTCGMSGCCASKCTGMM SKTCSMSGACASKSAGMS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C095 Reverse Complement Original Motif RYCWGRSTGYCSYCGARB KCCAKMSTGGTSKMCAGM DYCAGASTGBYSBCSARH Direction: Forward Position #: 1 Overlap #: 18 Alignment: RYCWGRSTGYCSYCGARB KCCAKMSTGGTSKMCAGM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C005 Reverse Complement Original Motif DMTSGVSKBCASTCTGKH TCTGTAGMCCAGGCTGGCCTYGW BCTGKAGVCCAGGCTGGCCTYGW Direction: Forward Position #: 1 Overlap #: 18 Alignment: DMTSGVSKBCASTCTGKH----- TCTGTAGMCCAGGCTGGCCTYGW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C124 Reverse Complement Reverse Complement WCKAGGCCAGCCTGGVCTRCAGV WSGASKSCAGCSMSGTSW WCGAGKCCAGCSHGGHSTRCAGV Direction: Forward Position #: 1 Overlap #: 18 Alignment: WCKAGGCCAGCCTGGVCTRCAGV WSGASKSCAGCSMSGTSW----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C013 Reverse Complement Original Motif BCTGKASHCCHSGCTGGYCTCGW WVCTGGAACTCACTHTGTAGACCAGGM WBCTGGARCYCASKCTGKMSWCSAGGM Direction: Forward Position #: 2 Overlap #: 23 Alignment: -BCTGKASHCCHSGCTGGYCTCGW--- WVCTGGAACTCACTHTGTAGACCAGGM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 93 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C093 C004 Original Motif Original Motif AKCCASMBSCCKSTGCMT SSSSSCSSSSSCCSSSSCCSCSSSSSS CSSSSSSVBSCVSCBSCCGSBSCCBSS Direction: Backward Position #: 8 Overlap #: 18 Alignment: --AKCCASMBSCCKSTGCMT------- SSSSSCSSSSSCCSSSSCCSCSSSSSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Original Motif Original Motif CSSSSSSVBSCVSCBSCCGSBSCCBSS GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC CSSSSGSMYCCVSCBSCCBCBSCCYSSCCCCCSSC Direction: Forward Position #: 6 Overlap #: 22 Alignment: CSSSSSSVBSCVSCBSCCGSBSCCBSS-------- -----GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C036 Original Motif Reverse Complement CSSSSGSMYCCVSCBSCCBCBSCCYSSCCCCCSSC RRCTRRRTCTCRRRCTRY RSCBVVRBCTCVVVCTRCCBCBSCCYSSCCCCCSSC Direction: Forward Position #: 2 Overlap #: 17 Alignment: -CSSSSGSMYCCVSCBSCCBCBSCCYSSCCCCCSSC RRCTRRRTCTCRRRCTRY------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C037 Reverse Complement Reverse Complement GSSGGGGGSSKGGSBGBGGMAGVVVGAGBMVVVGSK BVGGYGKSGGYGBCGGVS GSGGBGGSGGBGGSGGBSGMAGVVVGAGBMVVVGSK Direction: Forward Position #: 1 Overlap #: 18 Alignment: GSSGGGGGSSKGGSBGBGGMAGVVVGAGBMVVVGSK BVGGYGKSGGYGBCGGVS------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C073 Combined Motif Original Motif Reverse Complement GSGGBGGSGGBGGSGGBSGMAGVVVGAGBMVVVGSK KAGYSYKGGCTKRSCWYK GSGGBGGBRGYGBBGGCKKVVSDHBGAGBMVVVGSK Direction: Forward Position #: 8 Overlap #: 18 Alignment: GSGGBGGSGGBGGSGGBSGMAGVVVGAGBMVVVGSK -------KAGYSYKGGCTKRSCWYK----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 94 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C094 C102 Original Motif Original Motif SSHCCCSGCCCCSG SCMCCSSSVCCMSS SCMCCCSSMCCCSS Direction: Forward Position #: 1 Overlap #: 14 Alignment: SSHCCCSGCCCCSG SCMCCSSSVCCMSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Reverse Complement Reverse Complement SSGGGRSSGGGRGS GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC SSGGGVGGGGGVGGGGGGKGGVMGGSHGKGSC Direction: Forward Position #: 3 Overlap #: 12 Alignment: SSGGGRSSGGGRGS------------------ --GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C004 Combined Motif Reverse Complement Original Motif GSCYCHSCCYVCCYCCCCCCVCCCCCVCCCSS SSSSSCSSSSSCCSSSSCCSCSSSSSS GSCBCBSCCYSCCSCCCCCSCCCCCSSCSCSS Direction: Forward Position #: 4 Overlap #: 27 Alignment: GSCYCHSCCYVCCYCCCCCCVCCCCCVCCCSS ---SSSSSCSSSSSCCSSSSCCSCSSSSSS-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C023 Combined Motif Reverse Complement Reverse Complement SSGSGSSGGGGGSGGGGGSGGSKGGSBGBGSC SSGGSGDBGSGGSS SSGGSGVSGSGGSSGGGGSGGSKGGSBGBGSC Direction: Forward Position #: 1 Overlap #: 14 Alignment: SSGSGSSGGGGGSGGGGGSGGSKGGSBGBGSC SSGGSGDBGSGGSS------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C077 Combined Motif Original Motif Reverse Complement SSGGSGVSGSGGSSGGGGSGGSKGGSBGBGSC BGGGGGSSCCGGGGBS SSGGSGVGGSGGGSSSSGGGGBBGGSBGBGSC Direction: Forward Position #: 8 Overlap #: 16 Alignment: SSGGSGVSGSGGSSGGGGSGGSKGGSBGBGSC -------BGGGGGSSCCGGGGBS--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 95 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C095 C005 Reverse Complement Original Motif RCTGYYSACCASYYTGGY TCTGTAGMCCAGGCTGGCCTYGW ASTSCHGRCYRGCCTSGHTCTGT Direction: Backward Position #: 1 Overlap #: 18 Alignment: -----RCTGYYSACCASYYTGGY TCTGTAGMCCAGGCTGGCCTYGW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C092 Original Motif Reverse Complement ASTSCHGRCYRGCCTSGHTCTGT KKTCGMSGCCASKCTGMM DBTSBMSGCCASBCTGVHTCTGT Direction: Forward Position #: 1 Overlap #: 18 Alignment: ASTSCHGRCYRGCCTSGHTCTGT KKTCGMSGCCASKCTGMM----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C013 Original Motif Original Motif DBTSBMSGCCASBCTGVHTCTGT WVCTGGAACTCACTHTGTAGACCAGGM WVCTGGAACTCACTHTGTAGWCCAGGCCASBCTGVHTCTGT Direction: Forward Position #: 19 Overlap #: 9 Alignment: ------------------DBTSBMSGCCASBCTGVHTCTGT WVCTGGAACTCACTHTGTAGACCAGGM-------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C128 Reverse Complement Reverse Complement ACAGADVCAGVSTGGCCTGGWCTACADAGTGAGTTCCAGVW SKTCSMSGACASKSAGMS SKWCVVVGACAGDSWGVCCTGGWCTACADAGTGAGTTCCAGVW Direction: Forward Position #: 3 Overlap #: 16 Alignment: --ACAGADVCAGVSTGGCCTGGWCTACADAGTGAGTTCCAGVW SKTCSMSGACASKSAGMS------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C040 Combined Motif Original Motif Original Motif SKWCVVVGACAGDSWGVCCTGGWCTACADAGTGAGTTCCAGVW RSTGASYTCMARSYCAGY SKWCRVHGACHKCVAGVYCWGBWCTACADAGTGAGTTCCAGVW Direction: Forward Position #: 5 Overlap #: 18 Alignment: SKWCVVVGACAGDSWGVCCTGGWCTACADAGTGAGTTCCAGVW ----RSTGASYTCMARSYCAGY--------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 96 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C096 C121 Original Motif Original Motif MRMCMYGSCYRGCCYK MRCCCTRGCYSTCCYK MRCCCTRGCYVKCCYK Direction: Backward Position #: 1 Overlap #: 16 Alignment: MRMCMYGSCYRGCCYK MRCCCTRGCYSTCCYK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C073 Original Motif Reverse Complement MRCCCTRGCYVKCCYK KAGYSYKGGCTKRSCWYK BRSCCYKGSCBKVCCKYK Direction: Forward Position #: 1 Overlap #: 16 Alignment: MRCCCTRGCYVKCCYK-- KAGYSYKGGCTKRSCWYK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C005 Reverse Complement Reverse Complement YMRGGVRVGSCYMGGSKB WCKAGGCCAGCCTGGYCTACAGA WCVAGGCVAGCCTVGKCTACAGA Direction: Forward Position #: 2 Overlap #: 18 Alignment: -YMRGGVRVGSCYMGGSKB---- WCKAGGCCAGCCTGGYCTACAGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C061 Reverse Complement Reverse Complement TCTGTAGYCVAGGCTVGCCTBGW RGGCCDGCCTBRRCMY DBKSYRGCCBHGGCHBGCCTBGW Direction: Forward Position #: 1 Overlap #: 16 Alignment: TCTGTAGYCVAGGCTVGCCTBGW RGGCCDGCCTBRRCMY------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Reverse Complement Reverse Complement WCVAGGCVHGCCHVGGCKKSRBD GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC WCVAGGSVVGSSBVGGSKKSDGDVMGGSHGKGSC Direction: Forward Position #: 5 Overlap #: 19 Alignment: WCVAGGCVHGCCHVGGCKKSRBD----------- ----GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 97 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C097 C024 Reverse Complement Reverse Complement WVTTSWWTTTTWWSTTBW THTTDMWTTTTWKMTTDA WHTTBWWTTTTWWVTTDW Direction: Backward Position #: 1 Overlap #: 18 Alignment: WVTTSWWTTTTWWSTTBW THTTDMWTTTTWKMTTDA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C001 Original Motif Reverse Complement WHTTBWWTTTTWWVTTDW WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW WWHTTTTWTTTTTTHTTTTTWWTTTTTWWW Direction: Forward Position #: 2 Overlap #: 18 Alignment: -WHTTBWWTTTTWWVTTDW----------- WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C030 Combined Motif Original Motif Reverse Complement WWHTTTTWTTTTTTHTTTTTWWTTTTTWWW YTWTTTTTTTTYTTTTTMW WWHTTTYTWTTTTTHTTTTTWTTWTTTWWW Direction: Forward Position #: 7 Overlap #: 19 Alignment: WWHTTTTWTTTTTTHTTTTTWWTTTTTWWW ------YTWTTTTTTTTYTTTTTMW----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C016 Reverse Complement Original Motif WWWAAAWAAWAAAAAHAAAAAWAMAAAHWW HWAAWAAAHWAAMAWAMAAWW HWAAWAAAAWAAAAWAMAADWAAAAWAMAAAHWW Direction: Forward Position #: 5 Overlap #: 17 Alignment: ----WWWAAAWAAWAAAAAHAAAAAWAMAAAHWW HWAAWAAAHWAAMAWAMAAWW------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C010 Combined Motif Original Motif Original Motif HWAAWAAAAWAAAAWAMAADWAAAAWAMAAAHWW WWWAAAAWWAAAAAAAAAAWW WWAAAAAWWAAAAAAAMAAWWAAAAWAMAAAHWW Direction: Forward Position #: 1 Overlap #: 21 Alignment: HWAAWAAAAWAAAAWAMAADWAAAAWAMAAAHWW WWWAAAAWWAAAAAAAAAAWW------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 98 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C098 C030 Reverse Complement Reverse Complement HWTTWWTTYTWWTTTT YTWTTTTTTTTYTTTTTMW YTWTTTTWHTTYTTWTTHW Direction: Forward Position #: 4 Overlap #: 16 Alignment: ---HWTTWWTTYTWWTTTT YTWTTTTTTTTYTTTTTMW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C001 Combined Motif Original Motif Reverse Complement YTWTTTTWHTTYTTWTTHW WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW YTWWWYTTTTTTTTTTTWTTTTTWWTTTTTWWW Direction: Forward Position #: 4 Overlap #: 16 Alignment: YTWTTTTWHTTYTTWTTHW-------------- ---WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C043 Combined Motif Original Motif Reverse Complement YTWWWYTTTTTTTTTTTWTTTTTWWTTTTTWWW WATTMTTTTTTWTTWW YTWWWYTWWTTHTTTTTWTTTTWWWTTTTTWWW Direction: Forward Position #: 8 Overlap #: 16 Alignment: YTWWWYTTTTTTTTTTTWTTTTTWWTTTTTWWW -------WATTMTTTTTTWTTWW---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C033 Reverse Complement Original Motif WWWAAAAAWWWAAAAWAAAAADAAWWAMWWWAM WWAAWYAAAMRWAAAW WWAAWHAAAAAWAAAAAAWAAAAADAAWWAMWWWAM Direction: Forward Position #: 4 Overlap #: 13 Alignment: ---WWWAAAAAWWWAAAAWAAAAADAAWWAMWWWAM WWAAWYAAAMRWAAAW-------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C057 Combined Motif Original Motif Original Motif WWAAWHAAAAAWAAAAAAWAAAAADAAWWAMWWWAM WRMARYAAMARYAAMAWH WWAAWHAAAAAAWAAAAAHAAAAADAAWWAMWWWAM Direction: Forward Position #: 8 Overlap #: 18 Alignment: WWAAWHAAAAAWAAAAAAWAAAAADAAWWAMWWWAM -------WRMARYAAMARYAAMAWH----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 99 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C099 C019 Original Motif Original Motif MYCCCMGCACTCKGGARK MWYCCCAGCACTTGGGAGGCAG MHYCCCAGCACTYKGGAGGCAG Direction: Forward Position #: 2 Overlap #: 18 Alignment: -MYCCCMGCACTCKGGARK--- MWYCCCAGCACTTGGGAGGCAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C015 Original Motif Original Motif MHYCCCAGCACTYKGGAGGCAG DVAGCCWKGGCTACAVAGCK HHHSCCAGSRCTHBRGAGBBAG Direction: Forward Position #: 1 Overlap #: 20 Alignment: MHYCCCAGCACTYKGGAGGCAG DVAGCCWKGGCTACAVAGCK-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C047 Combined Motif Original Motif Original Motif HHHSCCAGSRCTHBRGAGBBAG TSGAAMTCACTMKGTASA HTVGMMMKCACTMBGKAGABAG Direction: Forward Position #: 2 Overlap #: 18 Alignment: HHHSCCAGSRCTHBRGAGBBAG -TSGAAMTCACTMKGTASA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C035 Reverse Complement Reverse Complement CTBTCTRCBYAGTGYYRYCVAH WWTTTMYAGACRKGGTWW WCTTTCTASHCAGKGHHDYCVAH Direction: Forward Position #: 2 Overlap #: 17 Alignment: -CTBTCTRCBYAGTGYYRYCVAH WWTTTMYAGACRKGGTWW----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C128 Reverse Complement Reverse Complement HTVGMDHHCRCTGHSTAGAAAGW SKTCSMSGACASKSAGMS SBTCSMBGACACTGWGHVGAAAGW Direction: Forward Position #: 2 Overlap #: 17 Alignment: -HTVGMDHHCRCTGHSTAGAAAGW SKTCSMSGACASKSAGMS------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 100 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C100 C027 Reverse Complement Reverse Complement WHGASACAGSGWDW WHKAGACAGGGTTTCMCTGKY WHGAGACAGGGTTTCMCTGKY Direction: Forward Position #: 1 Overlap #: 14 Alignment: WHGASACAGSGWDW------- WHKAGACAGGGTTTCMCTGKY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C035 Combined Motif Original Motif Reverse Complement WHGAGACAGGGTTTCMCTGKY WWTTTMYAGACRKGGTWW WHGAGACAGGGTTTCMHTKTHYAGACRKGGTWW Direction: Forward Position #: 16 Overlap #: 6 Alignment: WHGAGACAGGGTTTCMCTGKY------------ ---------------WWTTTMYAGACRKGGTWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C078 Combined Motif Original Motif Reverse Complement WHGAGACAGGGTTTCMHTKTHYAGACRKGGTWW KMTCKCTCTMTCKM WHGAGACDRKSTHTCTMTBKMYAGACRKGGTWW Direction: Forward Position #: 8 Overlap #: 14 Alignment: WHGAGACAGGGTTTCMHTKTHYAGACRKGGTWW -------KMTCKCTCTMTCKM------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C012 Reverse Complement Reverse Complement WWACCYKGTCTMRRBAYAGADASRMDGTCTCHW YRTCTCTCTCTRYCTCTRR HRDCYCTSTCTVBMKMTAGADASRMDGTCTCHW Direction: Forward Position #: 1 Overlap #: 19 Alignment: WWACCYKGTCTMRRBAYAGADASRMDGTCTCHW YRTCTCTCTCTRYCTCTRR-------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C025 Original Motif Reverse Complement HRDCYCTSTCTVBMKMTAGADASRMDGTCTCHW RRTCRCTCTRTCRR DRTCDCTSTVTMDVKMTAGADASRMDGTCTCHW Direction: Forward Position #: 1 Overlap #: 14 Alignment: HRDCYCTSTCTVBMKMTAGADASRMDGTCTCHW RRTCRCTCTRTCRR------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 101 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C101 C003 Original Motif Original Motif YTSCCTSKSVSTCCCAR GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC GSCYCTSCCTSBCHSYCCCMVSCCCCCSSC Direction: Forward Position #: 5 Overlap #: 17 Alignment: ----YTSCCTSKSVSTCCCAR--------- GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C017 Combined Motif Reverse Complement Original Motif GSSGGGGGSVRGGGMSDGBSAGGSAGKGSC WSWGAGASWSAGAGASWS GSSGGGDGDSRGRGASRGDSAGDSAGKGSC Direction: Forward Position #: 7 Overlap #: 18 Alignment: GSSGGGGGSVRGGGMSDGBSAGGSAGKGSC ------WSWGAGASWSAGAGASWS------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C107 Combined Motif Original Motif Reverse Complement GSSGGGDGDSRGRGASRGDSAGDSAGKGSC CDGGGBTTVMAGGVBHG SBGGGGBBDVAGGVDBGGDSAGDSAGKGSC Direction: Forward Position #: 1 Overlap #: 17 Alignment: GSSGGGDGDSRGRGASRGDSAGDSAGKGSC CDGGGBTTVMAGGVBHG------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C004 Combined Motif Original Motif Reverse Complement SBGGGGBBDVAGGVDBGGDSAGDSAGKGSC SSSSSSGSGGSSSSGGSSSSSGSSSSS SBGSGGBSVSVGGSVSSGGSVGBSVGGGSC Direction: Forward Position #: 4 Overlap #: 27 Alignment: SBGGGGBBDVAGGVDBGGDSAGDSAGKGSC ---SSSSSSGSGGSSSSGGSSSSSGSSSSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C140 Combined Motif Reverse Complement Original Motif GSCCCVSBCBSCCSSVSCCVSVSBCCSCBS BSCCBCVSSSBCCYHVG GSCCCVSBCCSCSSSSBCCHVVSBCCSCBS Direction: Forward Position #: 7 Overlap #: 17 Alignment: GSCCCVSBCBSCCSSVSCCVSVSBCCSCBS ------BSCCBCVSSSBCCYHVG------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 102 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C102 C112 Original Motif Original Motif SCMCCSSSVCCMSS CCBCYSSSGCCCCSS SCCHCCSSSRCCCSS Direction: Backward Position #: 2 Overlap #: 14 Alignment: SCMCCSSSVCCMSS- CCBCYSSSGCCCCSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C140 Combined Motif Original Motif Original Motif SCCHCCSSSRCCCSS BSCCBCVSSSBCCYHVG SCCBCCSCSSCCBCCYHVG Direction: Forward Position #: 3 Overlap #: 13 Alignment: SCCHCCSSSRCCCSS---- --BSCCBCVSSSBCCYHVG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C094 Original Motif Original Motif SCCBCCSCSSCCBCCYHVG SSHCCCSGCCCCSG SSCCCCCSCSSCSBCCYHVG Direction: Forward Position #: 2 Overlap #: 13 Alignment: -SCCBCCSCSSCCBCCYHVG SSHCCCSGCCCCSG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C003 Original Motif Original Motif SSCCCCCSCSSCSBCCYHVG GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC GSCYCHSSCYVCCBCCCCCCSSCCCSCSSC Direction: Forward Position #: 7 Overlap #: 20 Alignment: ------SSCCCCCSCSSCSBCCYHVG---- GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C077 Combined Motif Original Motif Original Motif GSCYCHSSCYVCCBCCCCCCSSCCCSCSSC SBCCCCGGSSCCCCCB GBCYCCSSSCBCCSCCCCCCSSCCCSCSSC Direction: Forward Position #: 1 Overlap #: 16 Alignment: GSCYCHSSCYVCCBCCCCCCSSCCCSCSSC SBCCCCGGSSCCCCCB-------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 103 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C103 C053 Original Motif Original Motif RRAGRAACCYTGYY RMACRGAGAAAYCCTGKY RMACRGAGAAACCYTGBY Direction: Forward Position #: 5 Overlap #: 14 Alignment: ----RRAGRAACCYTGYY RMACRGAGAAAYCCTGKY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C027 Reverse Complement Original Motif MVCAKGGTTTCTCKGTYK MRCAGRGAAACCCTGTCTYDW MRCAGGGWWWCYCTGTCTYDW Direction: Forward Position #: 1 Overlap #: 18 Alignment: MVCAKGGTTTCTCKGTYK--- MRCAGRGAAACCCTGTCTYDW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C117 Original Motif Original Motif MRCAGGGWWWCYCTGTCTYDW CMCWRSCTGYCCKG CMCARGSTDHCYBKGTCTYDW Direction: Forward Position #: 1 Overlap #: 14 Alignment: MRCAGGGWWWCYCTGTCTYDW CMCWRSCTGYCCKG------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C109 Combined Motif Original Motif Original Motif CMCARGSTDHCYBKGTCTYDW RMCWSGCTGSCCKY CMCARVCWBBCTGBSYBTYDW Direction: Forward Position #: 5 Overlap #: 14 Alignment: CMCARGSTDHCYBKGTCTYDW ----RMCWSGCTGSCCKY--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C132 Original Motif Reverse Complement CMCARVCWBBCTGBSYBTYDW WCCTKGWTCTCWCMCTGW HMCWDGHWCKCTSVSTGDYDW Direction: Forward Position #: 1 Overlap #: 18 Alignment: CMCARVCWBBCTGBSYBTYDW WCCTKGWTCTCWCMCTGW--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 104 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C104 C023 Reverse Complement Reverse Complement SSGGHGGGGKGGSS SSGGSGDBGSGGSS SSGGSGGGGGGGSS Direction: Forward Position #: 1 Overlap #: 14 Alignment: SSGGHGGGGKGGSS SSGGSGDBGSGGSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C008 Original Motif Reverse Complement SSGGSGGGGGGGSS SSGGSSGGGGSSGGSS SSGGSBGGGGBGGGSS Direction: Forward Position #: 1 Overlap #: 14 Alignment: SSGGSGGGGGGGSS-- SSGGSSGGGGSSGGSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C054 Combined Motif Original Motif Reverse Complement SSGGSBGGGGBGGGSS SSGGGGGGGHGGSS SSGSSGGGGGGGVGGSS Direction: Forward Position #: 4 Overlap #: 13 Alignment: SSGGSBGGGGBGGGSS- ---SSGGGGGGGHGGSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C004 Combined Motif Original Motif Reverse Complement SSGSSGGGGGGGVGGSS SSSSSSGSGGSSSSGGSSSSSGSSSSS SSGSSGGGGGSGGSGSSGGSSSSSGSSSSS Direction: Forward Position #: 4 Overlap #: 14 Alignment: SSGSSGGGGGGGVGGSS------------- ---SSSSSSGSGGSSSSGGSSSSSGSSSSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C037 Combined Motif Reverse Complement Original Motif SSSSSCSSSSSCCSSCSCCSCCCCCSSCSS SVCCGBCMCCSYCMCCVB SSSSSCSSCCSCCVCCSCCVCCSCCSSCSS Direction: Forward Position #: 7 Overlap #: 18 Alignment: SSSSSCSSSSSCCSSCSCCSCCCCCSSCSS ------SVCCGBCMCCSYCMCCVB------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 105 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C105 C101 Original Motif Original Motif TGCCKMBSCCKMCCVA YTSCCTSKSVSTCCCAR TGCCTSBSCCTCCCMAY Direction: Backward Position #: 1 Overlap #: 16 Alignment: -TGCCKMBSCCKMCCVA YTSCCTSKSVSTCCCAR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C022 Combined Motif Original Motif Original Motif TGCCTSBSCCTCCCMAY BGCCYCBGSCYCCCSVS TBSCYBYSSCBCCCMVHS Direction: Forward Position #: 2 Overlap #: 16 Alignment: TGCCTSBSCCTCCCMAY- -BGCCYCBGSCYCCCSVS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Reverse Complement Reverse Complement SDBRGGGVGSSKBMGSBA GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC GSBGGGGGSSGGGVGGBRGVMGGSHGKGSC Direction: Forward Position #: 1 Overlap #: 18 Alignment: SDBRGGGVGSSKBMGSBA------------ GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C140 Combined Motif Original Motif Reverse Complement GSBGGGGGSSGGGVGGBRGVMGGSHGKGSC CVDMGGBSSSVGBGGSB SVBVGGBGSSVGGGGSBRGVMGGSHGKGSC Direction: Forward Position #: 1 Overlap #: 17 Alignment: GSBGGGGGSSGGGVGGBRGVMGGSHGKGSC CVDMGGBSSSVGBGGSB------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C008 Combined Motif Reverse Complement Original Motif GSCYCHSCCYVCKBSCCCCVSSCBCCBBVS SSCCSSCCCCSSCCSS GSCYCHSCCCVCBCCCCSCCSSCBCCBBVS Direction: Forward Position #: 7 Overlap #: 16 Alignment: GSCYCHSCCYVCKBSCCCCVSSCBCCBBVS ------SSCCSSCCCCSSCCSS-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 106 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C106 C060 Reverse Complement Reverse Complement RSTGCCWCTGCSY SYTGCCYYTGCCYS SVCTGCCYCTGCCY Direction: Backward Position #: 2 Overlap #: 13 Alignment: RSTGCCWCTGCSY- SYTGCCYYTGCCYS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C084 Combined Motif Reverse Complement Original Motif MGGCAGMGGCAGVS SCTGCMKCTGCVB MGGCWGHVGCWGCSB Direction: Forward Position #: 3 Overlap #: 12 Alignment: MGGCAGMGGCAGVS- --SCTGCMKCTGCVB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C075 Original Motif Original Motif MGGCWGHVGCWGCSB MGGCAGMSGCAGSCK MGGCAGMSGCAGSCK Direction: Forward Position #: 1 Overlap #: 15 Alignment: MGGCWGHVGCWGCSB MGGCAGMSGCAGSCK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C048 Original Motif Original Motif MGGCAGMSGCAGSCK SGAGGCWSWGGCAGSC SGAGGCWGWGGCAGSCK Direction: Forward Position #: 3 Overlap #: 14 Alignment: --MGGCAGMSGCAGSCK SGAGGCWSWGGCAGSC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C118 Reverse Complement Reverse Complement RGSCTGCCWCWGCCTCS GRGGCASWSGCAGYC GRGGCWSHSKCWGCCTCS Direction: Forward Position #: 2 Overlap #: 14 Alignment: -RGSCTGCCWCWGCCTCS GRGGCASWSGCAGYC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 107 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C107 C003 Original Motif Original Motif CHBBCCTYBAABCCCDG GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC SCCCCCSSCCHBYCCBYCHVBCCCVSGSCY Direction: Backward Position #: 10 Overlap #: 17 Alignment: ----CHBBCCTYBAABCCCDG--------- GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C020 Combined Motif Original Motif Original Motif SCCCCCSSCCHBYCCBYCHVBCCCVSGSCY BSCVCCSCCVCSCCCACS SCCCCCSCCCCSCCCDCCHVBCCCVSGSCY Direction: Forward Position #: 1 Overlap #: 18 Alignment: SCCCCCSSCCHBYCCBYCHVBCCCVSGSCY BSCVCCSCCVCSCCCACS------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C086 Combined Motif Original Motif Reverse Complement SCCCCCSCCCCSCCCDCCHVBCCCVSGSCY CSTSCCYCWGRCTCCSG CSYSCCBCCSVCBCCVSCHVBCCCVSGSCY Direction: Forward Position #: 1 Overlap #: 17 Alignment: SCCCCCSCCCCSCCCDCCHVBCCCVSGSCY CSTSCCYCWGRCTCCSG------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C122 Combined Motif Original Motif Original Motif CSYSCCBCCSVCBCCVSCHVBCCCVSGSCY YAGCCCWGSCWSBCCTR BVBCCCHSBSHSBCCBVCHVBCCCVSGSCY Direction: Forward Position #: 1 Overlap #: 17 Alignment: CSYSCCBCCSVCBCCVSCHVBCCCVSGSCY YAGCCCWGSCWSBCCTR------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C004 Original Motif Original Motif BVBCCCHSBSHSBCCBVCHVBCCCVSGSCY SSSSSCSSSSSCCSSSSCCSCSSSSSS SSSSSSSSCCBSCSVSSCCBSCVSSSCCVSGSCY Direction: Forward Position #: 5 Overlap #: 23 Alignment: ----BVBCCCHSBSHSBCCBVCHVBCCCVSGSCY SSSSSCSSSSSCCSSSSCCSCSSSSSS------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 108 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C108 C125 Original Motif Original Motif RBACWGASAWASVY SKASWYASAGRWASMS ASACAGASAWASMBSK Direction: Backward Position #: 1 Overlap #: 14 Alignment: --RBACWGASAWASVY SKASWYASAGRWASMS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C021 Original Motif Original Motif ASACAGASAWASMBSK MKAGMVAGAKAGMK AKASASAGATASMKSK Direction: Forward Position #: 1 Overlap #: 14 Alignment: ASACAGASAWASMBSK MKAGMVAGAKAGMK-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C053 Original Motif Original Motif AKASASAGATASMKSK RMACRGAGAAAYCCTGKY RHACAGAGAAABCBBKKY Direction: Forward Position #: 1 Overlap #: 16 Alignment: AKASASAGATASMKSK-- RMACRGAGAAAYCCTGKY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C017 Combined Motif Reverse Complement Reverse Complement MRYVBGBTTTCTCTGTHK SWSTCTCTSWSTCTCWSW MRCWSKSTHTCTCTSTVTSW Direction: Forward Position #: 3 Overlap #: 16 Alignment: MRYVBGBTTTCTCTGTHK-- --SWSTCTCTSWSTCTCWSW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C070 Original Motif Reverse Complement MRCWSKSTHTCTCTSTVTSW RBSTCTVTCTBTCVC VDSTSTSTBTSTCBSTVTSW Direction: Forward Position #: 1 Overlap #: 15 Alignment: MRCWSKSTHTCTCTSTVTSW RBSTCTVTCTBTCVC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 109 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C109 C117 Original Motif Original Motif RMCWSGCTGSCCKY CMCWRSCTGYCCKG MMCWVGCTGSCCKB Direction: Backward Position #: 1 Overlap #: 14 Alignment: RMCWSGCTGSCCKY CMCWRSCTGYCCKG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C039 Combined Motif Reverse Complement Reverse Complement BRGGSCAGCVWGYR SBCCKSSCTGSMCTRS BRGSCCAGSCTGBVCTRS Direction: Forward Position #: 3 Overlap #: 12 Alignment: BRGGSCAGCVWGYR---- --SBCCKSSCTGSMCTRS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C005 Reverse Complement Reverse Complement SMAGVBCAGSCTGGSCKB WCKAGGCCAGCCTGGYCTACAGA WCVAGGBCAGCCTGGYCTDCAGA Direction: Forward Position #: 2 Overlap #: 18 Alignment: -SMAGVBCAGSCTGGSCKB---- WCKAGGCCAGCCTGGYCTACAGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C124 Original Motif Reverse Complement WCVAGGBCAGCCTGGYCTDCAGA WSGASKSCAGCSMSGTSW WSGAGKSCAGCCHGGYCTDCAGA Direction: Forward Position #: 1 Overlap #: 18 Alignment: WCVAGGBCAGCCTGGYCTDCAGA WSGASKSCAGCSMSGTSW----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C122 Reverse Complement Reverse Complement TCTGDAGMCCHGGCTGSYCTCSW MAGGVSWGSCWGGGCTK MWSKGBWGVCHDGGCTGSYCTCSW Direction: Forward Position #: 2 Overlap #: 16 Alignment: -TCTGDAGMCCHGGCTGSYCTCSW MAGGVSWGSCWGGGCTK------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 110 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C110 C035 Original Motif Original Motif YYCTKTCTCMAARR WWACCYKGTCTMRAAAWW WCYCTGTCTCVAAADWWA Direction: Backward Position #: 2 Overlap #: 14 Alignment: ---YYCTKTCTCMAARR- WWACCYKGTCTMRAAAWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C021 Original Motif Reverse Complement WCYCTGTCTCVAAADWWA RYCTRTCTVYCTRY RYCTVTSTCTCDAHADWWA Direction: Forward Position #: 2 Overlap #: 13 Alignment: -WCYCTGTCTCVAAADWWA RYCTRTCTVYCTRY----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C034 Reverse Complement Original Motif TWWDTHTDGAGASAVAGMK SCACTGSGGAGSMAGAGS BHWBTBBRGAGVSAGAGVK Direction: Forward Position #: 1 Overlap #: 18 Alignment: TWWDTHTDGAGASAVAGMK SCACTGSGGAGSMAGAGS- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C128 Reverse Complement Original Motif RVCTCTSBCTCMVVABWDV SYCTSRSTGTCSYSGARS VBCTSDSTSTCSBVRDDBV Direction: Forward Position #: 1 Overlap #: 18 Alignment: RVCTCTSBCTCMVVABWDV SYCTSRSTGTCSYSGARS- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Reverse Complement Reverse Complement BBDDMVBSGASASDSAGBV GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC BBDGVSVGGRGVSGGRGBVKGGVMGGSHGKGSC Direction: Forward Position #: 4 Overlap #: 16 Alignment: BBDDMVBSGASASDSAGBV-------------- ---GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 111 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C111 C124 Reverse Complement Reverse Complement YSGAWKTCAGMWATBA WSGASKSCAGCSMSGTSW WSGADKBCAGMBMBGDSW Direction: Forward Position #: 1 Overlap #: 16 Alignment: YSGAWKTCAGMWATBA-- WSGASKSCAGCSMSGTSW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C032 Original Motif Original Motif WSGADKBCAGMBMBGDSW HWAAWYDAAAMWRWAMWR HDRADTDMARMHRDRHBW Direction: Forward Position #: 1 Overlap #: 18 Alignment: WSGADKBCAGMBMBGDSW HWAAWYDAAAMWRWAMWR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C079 Combined Motif Original Motif Original Motif HDRADTDMARMHRDRHBW ADAAAKWAAAAWAKARW HDAAHKWMAAAWADAAHW Direction: Forward Position #: 1 Overlap #: 17 Alignment: HDRADTDMARMHRDRHBW ADAAAKWAAAAWAKARW- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C097 Reverse Complement Reverse Complement WHTTDTWTTTYWRHTTDH WVTTSWWTTTTWWSTTBW WHTTVWWTTTTWWBTTDW Direction: Forward Position #: 1 Overlap #: 18 Alignment: WHTTDTWTTTYWRHTTDH WVTTSWWTTTTWWSTTBW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C016 Combined Motif Reverse Complement Original Motif WHAABWWAAAAWWVAADW HWAAWAAAHWAAMAWAMAAWW WHAADWAAAAAHWMAAAWAMAAWW Direction: Forward Position #: 4 Overlap #: 15 Alignment: WHAABWWAAAAWWVAADW------ ---HWAAWAAAHWAAMAWAMAAWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 112 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C112 C140 Original Motif Original Motif CCBCYSSSGCCCCSS BSCCBCVSSSBCCYHVG CCBCBSSSGCCHMSGBS Direction: Backward Position #: 1 Overlap #: 15 Alignment: --CCBCYSSSGCCCCSS BSCCBCVSSSBCCYHVG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C058 Original Motif Original Motif CCBCBSSSGCCHMSGBS CYCCBCSGVCYCCBC CCCCBSSSVCCCCBSBS Direction: Forward Position #: 1 Overlap #: 15 Alignment: CCBCBSSSGCCHMSGBS CYCCBCSGVCYCCBC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C004 Reverse Complement Reverse Complement SBSBGGGGVSSSBGGGG SSSSSSGSGGSSSSGGSSSSSGSSSSS SSSSSSGSSGSGGSSSSSGSGGSSSSS Direction: Forward Position #: 6 Overlap #: 17 Alignment: -----SBSBGGGGVSSSBGGGG----- SSSSSSGSGGSSSSGGSSSSSGSSSSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Original Motif Reverse Complement SSSSSSGSSGSGGSSSSSGSGGSSSSS GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC SSSSSGSSSGGGGSSGGGGGGGGGSVGGSHGKGSC Direction: Forward Position #: 6 Overlap #: 22 Alignment: SSSSSSGSSGSGGSSSSSGSGGSSSSS-------- -----GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C022 Combined Motif Reverse Complement Original Motif GSCYCHSCCVSCCCCCCCCCSSCCCCSSSCSSSSS BGCCYCBGSCYCCCSVS GSCYCCBSCVBCCCCVCCCCSSCCCCSSSCSSSSS Direction: Forward Position #: 1 Overlap #: 17 Alignment: GSCYCHSCCVSCCCCCCCCCSSCCCCSSSCSSSSS BGCCYCBGSCYCCCSVS------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 113 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C113 C058 Original Motif Original Motif CHCCSCSVSCCCC CYCCBCSGVCYCCBC BCCYCCSCSSSCYCC Direction: Backward Position #: 3 Overlap #: 13 Alignment: CHCCSCSVSCCCC-- CYCCBCSGVCYCCBC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C112 Reverse Complement Reverse Complement GGKGSSSGSGGKGGV SSGGGGCSSSKGBGG VSGGGSCSSGGGGGG Direction: Forward Position #: 1 Overlap #: 15 Alignment: GGKGSSSGSGGKGGV SSGGGGCSSSKGBGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C003 Original Motif Reverse Complement VSGGGSCSSGGGGGG GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC GSGGGGSGSSGGGGGGKGGVMGGSHGKGSC Direction: Forward Position #: 1 Overlap #: 15 Alignment: VSGGGSCSSGGGGGG--------------- GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C020 Combined Motif Original Motif Reverse Complement GSGGGGSGSSGGGGGGKGGVMGGSHGKGSC SGTGGGSGVGGSGGVGSB GSGGGGSGBGGGGGGGGGGGMGSSHGKGSC Direction: Forward Position #: 7 Overlap #: 18 Alignment: GSGGGGSGSSGGGGGGKGGVMGGSHGKGSC ------SGTGGGSGVGGSGGVGSB------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C071 Original Motif Reverse Complement GSGGGGSGBGGGGGGGGGGGMGSSHGKGSC SBGGTGSVSGTGGVS SSGGDGSGSGKGGGSGGGGGMGSSHGKGSC Direction: Forward Position #: 1 Overlap #: 15 Alignment: GSGGGGSGBGGGGGGGGGGGMGSSHGKGSC SBGGTGSVSGTGGVS--------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 114 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C114 C027 Original Motif Original Motif SRARCCMKGTCTYS MRCAGRGAAACCCTGTCTYDW WGAAACCCTGTCTYVMRCAGR Direction: Backward Position #: 2 Overlap #: 14 Alignment: ------SRARCCMKGTCTYS- MRCAGRGAAACCCTGTCTYDW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C015 Reverse Complement Reverse Complement MCTGKYVKAGACAGGGTTTCW RGCTVTGTAGCCYWGGCTVD VVYKBTGTAGMCHDGGYTDHW Direction: Forward Position #: 1 Overlap #: 20 Alignment: MCTGKYVKAGACAGGGTTTCW RGCTVTGTAGCCYWGGCTVD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C120 Reverse Complement Original Motif WDDAKCCHHGRCTACABRMVB TGARACMSKGTYTCA WGAADCCBDGDYTVVABRMVB Direction: Forward Position #: 1 Overlap #: 15 Alignment: WDDAKCCHHGRCTACABRMVB TGARACMSKGTYTCA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C005 Reverse Complement Reverse Complement VVYKBTBVAKDCDBGGDTTCW WCKAGGCCAGCCTGGYCTACAGA DVBWGBCVAGVCWGGKCTWCAGA Direction: Forward Position #: 1 Overlap #: 21 Alignment: VVYKBTBVAKDCDBGGDTTCW-- WCKAGGCCAGCCTGGYCTACAGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C045 Original Motif Original Motif DVBWGBCVAGVCWGGKCTWCAGA RYAGMCMKGKCTRY VYDDVBHBRGCYDBGKCTWCAGA Direction: Forward Position #: 1 Overlap #: 14 Alignment: DVBWGBCVAGVCWGGKCTWCAGA RYAGMCMKGKCTRY--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 115 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C115 C009 Reverse Complement Original Motif RHCCCASCRCKDY ABGCCTTTAATCCCAGCACTHR CAGCACTHRRBSCCWBYAMTCC Direction: Backward Position #: 10 Overlap #: 13 Alignment: RHCCCASCRCKDY--------- ABGCCTTTAATCCCAGCACTHR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C019 Combined Motif Reverse Complement Original Motif GGARTKVWGGSVKMHAGTGCTG MWYCCCAGCACTTGGGAGGCAG GGARTKVWGVHHBCMAGYRCTKGGGAGGCAG Direction: Forward Position #: 10 Overlap #: 13 Alignment: GGARTKVWGGSVKMHAGTGCTG--------- ---------MWYCCCAGCACTTGGGAGGCAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C099 Combined Motif Reverse Complement Reverse Complement CTGCCTCCCYAGKMCTRGBHHVCWBYAMTCC RKTCCRGAGTGCYGGGKR CTGVBTCCVBAGTVCTGGGDDVCWBYAMTCC Direction: Forward Position #: 4 Overlap #: 18 Alignment: CTGCCTCCCYAGKMCTRGBHHVCWBYAMTCC ---RKTCCRGAGTGCYGGGKR---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C141 Combined Motif Original Motif Reverse Complement CTGVBTCCVBAGTVCTGGGDDVCWBYAMTCC KYCAAGKMSKMGGATRK CTGVBTBCCVAGKVCTVGGDDVBWBYAMTCC Direction: Forward Position #: 7 Overlap #: 17 Alignment: CTGVBTCCVBAGTVCTGGGDDVCWBYAMTCC ------KYCAAGKMSKMGGATRK-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C003 Reverse Complement Reverse Complement GGARTKVWBVDDCCVAGBRCTBGGBABVCAG GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC GSGGRGKGVHGGGKSSVRGBASKBVGKRSSCAG Direction: Forward Position #: 3 Overlap #: 28 Alignment: --GGARTKVWBVDDCCVAGBRCTBGGBABVCAG GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 116 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C116 C080 Original Motif Original Motif WWMAWACACWMAWW WWAAVAAMMHAAWW WWAADAMACHMAWW Direction: Forward Position #: 1 Overlap #: 14 Alignment: WWMAWACACWMAWW WWAAVAAMMHAAWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C016 Original Motif Original Motif WWAADAMACHMAWW HWAAWAAAHWAAMAWAMAAWW HWAAWAAAHAMAMAHAHAAWW Direction: Forward Position #: 5 Overlap #: 14 Alignment: ----WWAADAMACHMAWW--- HWAAWAAAHWAAMAWAMAAWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C062 Reverse Complement Reverse Complement WWTTHTHTRTYTHTTTWTTWH WWDTTWMTRTRKWTYTWW WWWTTTHTRTBTWTTTWTTWH Direction: Forward Position #: 1 Overlap #: 18 Alignment: WWTTHTHTRTYTHTTTWTTWH WWDTTWMTRTRKWTYTWW--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C133 Combined Motif Reverse Complement Original Motif HWAAWAAAWAVAMAHAAAWWW AWMAWHDACACHRWMAW HWAWMAAADACACHHAMAWWW Direction: Forward Position #: 3 Overlap #: 17 Alignment: HWAAWAAAWAVAMAHAAAWWW --AWMAWHDACACHRWMAW-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C139 Combined Motif Reverse Complement Reverse Complement WWWTYTHHGTGTDTTTYWTWH WWTTTTVWWWBTTTYWW WWWTWWHTKTVWWWHTTTTWW Direction: Forward Position #: 5 Overlap #: 17 Alignment: WWWTYTHHGTGTDTTTYWTWH ----WWTTTTVWWWBTTTYWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 117 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C117 C109 Original Motif Original Motif CMCWRSCTGYCCKG RMCWSGCTGSCCKY MMCWVGCTGSCCKB Direction: Backward Position #: 1 Overlap #: 14 Alignment: CMCWRSCTGYCCKG RMCWSGCTGSCCKY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C122 Reverse Complement Original Motif BRGGSCAGCVWGYR YAGCCCWGSCWSBCCTR YAGSCCAGSCWGYCCTR Direction: Forward Position #: 1 Overlap #: 14 Alignment: BRGGSCAGCVWGYR--- YAGCCCWGSCWSBCCTR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C039 Combined Motif Reverse Complement Original Motif MAGGMCWGSCTGGSCTK SMAGRSCAGSSYGGBS MAGSMMGGSCWGSSCKGBS Direction: Forward Position #: 4 Overlap #: 14 Alignment: MAGGMCWGSCTGGSCTK-- ---SMAGRSCAGSSYGGBS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C121 Original Motif Reverse Complement MAGSMMGGSCWGSSCKGBS RKGGASMGCKAGGGMY VDGGMVVGCBAGGSMBGBS Direction: Forward Position #: 1 Overlap #: 16 Alignment: MAGSMMGGSCWGSSCKGBS RKGGASMGCKAGGGMY--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Reverse Complement Original Motif SBCVRSCCTBGCBVYCCDB GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC SBCGVCCCTBSCBVYCCBBCCCCSSCCCCCSSC Direction: Forward Position #: 4 Overlap #: 16 Alignment: SBCVRSCCTBGCBVYCCDB-------------- ---GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 118 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C118 C048 Reverse Complement Original Motif GRGGCASWSGCAGYC SGAGGCWSWGGCAGSC SGRGSMBBVGSMRGCC Direction: Forward Position #: 1 Overlap #: 15 Alignment: GRGGCASWSGCAGYC- SGAGGCWSWGGCAGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C066 Combined Motif Reverse Complement Original Motif GGCMYSCBBVRSCMCS MAMTCCCMSKGCCTCTK GGCMDSYCBVVSBVCCTCTK Direction: Forward Position #: 4 Overlap #: 13 Alignment: GGCMYSCBBVRSCMCS---- ---MAMTCCCMSKGCCTCTK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C101 Reverse Complement Reverse Complement YAGAGGVBSBVBGKSDRGCC MTGGGASVSYSAGGSAK MTBRGASGSBSHGGSDGDRGCC Direction: Forward Position #: 3 Overlap #: 15 Alignment: --YAGAGGVBSBVBGKSDRGCC MTGGGASVSYSAGGSAK----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Original Motif Reverse Complement MTBRGASGSBSHGGSDGDRGCC GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC MTBRGVSGGGGDGGGGGDGGBSGVMGGSHGKGSC Direction: Forward Position #: 5 Overlap #: 18 Alignment: MTBRGASGSBSHGGSDGDRGCC------------ ----GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C012 Combined Motif Original Motif Original Motif MTBRGVSGGGGDGGGGGDGGBSGVMGGSHGKGSC MKAGAGMKAGAGAGAGAKM MTVGRGVKRGRGVGRGRKVGBSGVMGGSHGKGSC Direction: Forward Position #: 1 Overlap #: 19 Alignment: MTBRGVSGGGGDGGGGGDGGBSGVMGGSHGKGSC MKAGAGMKAGAGAGAGAKM--------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 119 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C119 C046 Original Motif Original Motif SWRTYCCAGRACWS KSTGKCCTRGAACWSM KSTGTCCYAGAACWSM Direction: Forward Position #: 2 Overlap #: 14 Alignment: -SWRTYCCAGRACWS- KSTGKCCTRGAACWSM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C007 Original Motif Reverse Complement KSTGTCCYAGAACWSM SAGGCTGYCCTVGAACTCASAAY SAGGCTGTCCYRGAACTCASAAY Direction: Forward Position #: 4 Overlap #: 16 Alignment: ---KSTGTCCYAGAACWSM---- SAGGCTGYCCTVGAACTCASAAY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C009 Original Motif Original Motif SAGGCTGTCCYRGAACTCASAAY ABGCCTTTAATCCCAGCACTHR ABGCMKKYWRTCCYAGMACTBASAAY Direction: Forward Position #: 4 Overlap #: 19 Alignment: ---SAGGCTGTCCYRGAACTCASAAY ABGCCTTTAATCCCAGCACTHR---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C111 Original Motif Original Motif ABGCMKKYWRTCCYAGMACTBASAAY TBATWYCTGARWTCSM TBABDYCTGHRDTCCHAGMACTBASAAY Direction: Forward Position #: 3 Overlap #: 14 Alignment: --ABGCMKKYWRTCCYAGMACTBASAAY TBATWYCTGARWTCSM------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C040 Original Motif Original Motif TBABDYCTGHRDTCCHAGMACTBASAAY RSTGASYTCMARSYCAGY DSWGRSYTSHARBYCMRSMACTBASAAY Direction: Forward Position #: 1 Overlap #: 18 Alignment: TBABDYCTGHRDTCCHAGMACTBASAAY RSTGASYTCMARSYCAGY---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 120 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C120 C027 Original Motif Original Motif TGARACMSKGTYTCA MRCAGRGAAACCCTGTCTYDW WDGAAACCCTGTYTCDMRCAG Direction: Backward Position #: 2 Overlap #: 15 Alignment: -----TGARACMSKGTYTCA- MRCAGRGAAACCCTGTCTYDW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C101 Reverse Complement Reverse Complement CTGKYDGAKACAGGGTTTCDW MTGGGASVSYSAGGSAK MTGGBAGAGHCAGGSWKTCDW Direction: Forward Position #: 1 Overlap #: 17 Alignment: CTGKYDGAKACAGGGTTTCDW MTGGGASVSYSAGGSAK---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C015 Original Motif Reverse Complement MTGGBAGAGHCAGGSWKTCDW RGCTVTGTAGCCYWGGCTVD RGCTVKGWVGBMCWGGSTDTCDW Direction: Forward Position #: 3 Overlap #: 18 Alignment: --MTGGBAGAGHCAGGSWKTCDW RGCTVTGTAGCCYWGGCTVD--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C036 Combined Motif Original Motif Reverse Complement RGCTVKGWVGBMCWGGSTDTCDW RRCTRRRTCTCRRRCTRY RGVDVTRDRDCHCRGGCTRYCDW Direction: Forward Position #: 3 Overlap #: 18 Alignment: RGCTVKGWVGBMCWGGSTDTCDW --RRCTRRRTCTCRRRCTRY--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C125 Original Motif Reverse Complement RGVDVTRDRDCHCRGGCTRYCDW SYSTWKCTSTMWSTRS VBSTHKVTVTMHSTRGCTRYCDW Direction: Forward Position #: 1 Overlap #: 16 Alignment: RGVDVTRDRDCHCRGGCTRYCDW SYSTWKCTSTMWSTRS------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 121 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C121 C122 Original Motif Original Motif MRCCCTRGCYSTCCYK YAGCCCWGSCWSBCCTR YAGCCCTGGCHSYCCYD Direction: Forward Position #: 2 Overlap #: 16 Alignment: -MRCCCTRGCYSTCCYK YAGCCCWGSCWSBCCTR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C096 Reverse Complement Reverse Complement HMGGMSHGCCAGGGCTK RKGGCMMGSCKRGRKY VDGGHVMGCCDGGGBYK Direction: Forward Position #: 1 Overlap #: 16 Alignment: HMGGMSHGCCAGGGCTK RKGGCMMGSCKRGRKY- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C055 Original Motif Original Motif VDGGHVMGCCDGGGBYK MKAGAGMKMKAGAGMK MDRGVSMGCBAGRGHTK Direction: Forward Position #: 1 Overlap #: 16 Alignment: VDGGHVMGCCDGGGBYK MKAGAGMKMKAGAGMK- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C101 Combined Motif Reverse Complement Reverse Complement YADCMCTBGCYSBCMDY MTGGGASVSYSAGGSAK YADMHBKSRCBSYSMGBSAK Direction: Forward Position #: 4 Overlap #: 14 Alignment: YADCMCTBGCYSBCMDY--- ---MTGGGASVSYSAGGSAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Reverse Complement Original Motif YTSBCYSMSVGKSYBHRHTK GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC YTSBSBSHCHSYCYVCVHBBCCCCSSCCCCCSSC Direction: Forward Position #: 5 Overlap #: 16 Alignment: YTSBCYSMSVGKSYBHRHTK-------------- ----GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 122 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C122 C005 Original Motif Original Motif YAGCCCWGSCWSBCCTR TCTGTAGMCCAGGCTGGCCTYGW TCTGTAGCCCAGGCTGGCCTVGW Direction: Forward Position #: 5 Overlap #: 17 Alignment: ----YAGCCCWGSCWSBCCTR-- TCTGTAGMCCAGGCTGGCCTYGW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C073 Original Motif Reverse Complement TCTGTAGCCCAGGCTGGCCTVGW KAGYSYKGGCTKRSCWYK KDBYGYDGBCYDGSCTBKCCTVGW Direction: Forward Position #: 2 Overlap #: 17 Alignment: -TCTGTAGCCCAGGCTGGCCTVGW KAGYSYKGGCTKRSCWYK------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C107 Original Motif Original Motif KDBYGYDGBCYDGSCTBKCCTVGW CHBBCCTYBAABCCCDG BHBYSCDGBCHBSCCDGKCCTVGW Direction: Forward Position #: 1 Overlap #: 17 Alignment: KDBYGYDGBCYDGSCTBKCCTVGW CHBBCCTYBAABCCCDG------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C003 Original Motif Original Motif BHBYSCDGBCHBSCCDGKCCTVGW GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC GSCYCHSHCYSCHBBCCCCCCBSBCCBVGH Direction: Forward Position #: 7 Overlap #: 24 Alignment: ------BHBYSCDGBCHBSCCDGKCCTVGW GSCYCHSCCYVCCYCCCCCCSSCCCCCSSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C022 Combined Motif Reverse Complement Reverse Complement DCVVGGBSBGGGGGGBBDGSMGDSHGKGSC SVSGGGKGSCBGMGGCV VVSVGGKGBSGGVGGBVDGSMGDSHGKGSC Direction: Forward Position #: 1 Overlap #: 17 Alignment: DCVVGGBSBGGGGGGBBDGSMGDSHGKGSC SVSGGGKGSCBGMGGCV------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 123 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C123 C111 Original Motif Reverse Complement GAAMTCWGAAATC YSGAWKTCAGMWATBA BAGRAHTYHRRAAWYY Direction: Backward Position #: 3 Overlap #: 13 Alignment: -GAAMTCWGAAATC-- YSGAWKTCAGMWATBA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C053 Original Motif Reverse Complement BAGRAHTYHRRAAWYY MRCAGGMTTTCTCKGTYK MRCAGGATTTCDVDRTYB Direction: Forward Position #: 3 Overlap #: 16 Alignment: --BAGRAHTYHRRAAWYY MRCAGGMTTTCTCKGTYK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C139 Original Motif Original Motif MRCAGGATTTCDVDRTYB WWMAAABWWWVAAAAWW WWHARRVWTTCAAAVWWB Direction: Forward Position #: 1 Overlap #: 17 Alignment: MRCAGGATTTCDVDRTYB WWMAAABWWWVAAAAWW- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C032 Combined Motif Reverse Complement Reverse Complement VWWBTTTGAAWBKKTDWW KWYTWKWYTTTDMWTTWH VWWDHYTDDWHTTTTVWTTWH Direction: Forward Position #: 4 Overlap #: 15 Alignment: VWWBTTTGAAWBKKTDWW--- ---KWYTWKWYTTTDMWTTWH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C001 Original Motif Reverse Complement VWWDHYTDDWHTTTTVWTTWH WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW WWHTTTHWWTTTTTWWTTTTWWTTTTWWWW Direction: Forward Position #: 7 Overlap #: 21 Alignment: ------VWWDHYTDDWHTTTTVWTTWH--- WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 124 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C124 C005 Original Motif Original Motif WSACSRSGCTGSYSTCSW TCTGTAGMCCAGGCTGGCCTYGW TCTGTAGMCCAGGCTGGCCTCGW Direction: Forward Position #: 6 Overlap #: 18 Alignment: -----WSACSRSGCTGSYSTCSW TCTGTAGMCCAGGCTGGCCTYGW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C004 Combined Motif Original Motif Original Motif TCTGTAGMCCAGGCTGGCCTCGW SSSSSCSSSSSCCSSSSCCSCSSSSSS TCTGBVSVCCVSSCYSSCCBCSDCSSSSSS Direction: Forward Position #: 4 Overlap #: 20 Alignment: TCTGTAGMCCAGGCTGGCCTCGW------- ---SSSSSCSSSSSCCSSSSCCSCSSSSSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C047 Combined Motif Reverse Complement Reverse Complement SSSSSSGDSGVGGSSMGSSVGGVSBVCAGA TSTACRYAGTGAYTTCSA SSSSSSGDSGVGGSSMGSSVGGDSTACABAGTGAYTTCSA Direction: Forward Position #: 23 Overlap #: 8 Alignment: SSSSSSGDSGVGGSSMGSSVGGVSBVCAGA---------- ----------------------TSTACRYAGTGAYTTCSA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C042 Combined Motif Original Motif Original Motif SSSSSSGDSGVGGSSMGSSVGGDSTACABAGTGAYTTCSA WGTCCKRGAACYMACTCW SSSSSSGDSGVGGSSMGSSVGGDSTACABAGTGWCYTVGAACYMACTCW Direction: Forward Position #: 32 Overlap #: 9 Alignment: SSSSSSGDSGVGGSSMGSSVGGDSTACABAGTGAYTTCSA--------- -------------------------------WGTCCKRGAACYMACTCW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C092 Combined Motif Original Motif Reverse Complement SSSSSSGDSGVGGSSMGSSVGGDSTACABAGTGWCYTVGAACYMACTCW KKTCGMSGCCASKCTGMM SSSSSSGDSGDGKSSMSSCCRSKCTRCABAGTGWCYTVGAACYMACTCW Direction: Forward Position #: 11 Overlap #: 18 Alignment: SSSSSSGDSGVGGSSMGSSVGGDSTACABAGTGWCYTVGAACYMACTCW ----------KKTCGMSGCCASKCTGMM--------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 125 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C125 C012 Original Motif Original Motif SKASWYASAGRWASMS MKAGAGMKAGAGAGAGAKM MVGASMBAGAGRDASABMK Direction: Backward Position #: 2 Overlap #: 16 Alignment: --SKASWYASAGRWASMS- MKAGAGMKAGAGAGAGAKM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C011 Combined Motif Reverse Complement Reverse Complement RRBTSTDKCTCTVYSTCBY RRTCTCTCTCRRTCTCRR RRVTCTVTCTCDRTCTCDD Direction: Forward Position #: 2 Overlap #: 18 Alignment: RRBTSTDKCTCTVYSTCBY -RRTCTCTCTCRRTCTCRR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C036 Combined Motif Original Motif Reverse Complement RRVTCTVTCTCDRTCTCDD RRCTRRRTCTCRRRCTRY RRVTVDVTCTCDRDCTVBD Direction: Forward Position #: 1 Overlap #: 18 Alignment: RRVTCTVTCTCDRTCTCDD RRCTRRRTCTCRRRCTRY- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C085 Reverse Complement Original Motif HVVAGDKHGAGABDVAVMK VSGRSBHAGARDVSGRS VVGASDBAGAGDBVGASMK Direction: Forward Position #: 1 Overlap #: 17 Alignment: HVVAGDKHGAGABDVAVMK VSGRSBHAGARDVSGRS-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C017 Original Motif Original Motif VVGASDBAGAGDBVGASMK WSWGAGASWSAGAGASWS WSWSVGASDSAGAGASHSASMK Direction: Forward Position #: 4 Overlap #: 15 Alignment: ---VVGASDBAGAGDBVGASMK WSWGAGASWSAGAGASWS---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 126 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C126 C039 Original Motif Original Motif SVWGRCSMKSCTGGYS SMAGRSCAGSSYGGBS SVAGRSCAGSCTGGBS Direction: Backward Position #: 1 Overlap #: 16 Alignment: SVWGRCSMKSCTGGYS SMAGRSCAGSSYGGBS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C005 Combined Motif Reverse Complement Reverse Complement SVCCAGSCTGSMCTBS WCKAGGCCAGCCTGGYCTACAGA SDCBAGGCYRGCCTGGYCTACAGA Direction: Forward Position #: 2 Overlap #: 15 Alignment: SVCCAGSCTGSMCTBS-------- -WCKAGGCCAGCCTGGYCTACAGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C073 Reverse Complement Original Motif TCTGTAGMCCAGGCKKGCCTBGDS YMWGSMYAGCCRKSKCTR YMTGBABASCMGGSKBKVCTBGDS Direction: Forward Position #: 1 Overlap #: 18 Alignment: TCTGTAGMCCAGGCKKGCCTBGDS YMWGSMYAGCCRKSKCTR------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C140 Combined Motif Original Motif Original Motif YMTGBABASCMGGSKBKVCTBGDS BSCCBCVSSSBCCYHVG YMTGBVSMSCVGGSKCSHCHVGDS Direction: Forward Position #: 5 Overlap #: 17 Alignment: YMTGBABASCMGGSKBKVCTBGDS ----BSCCBCVSSSBCCYHVG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C124 Combined Motif Original Motif Original Motif YMTGBVSMSCVGGSKCSHCHVGDS WSACSRSGCTGSYSTCSW YMTGBHSMCCVSGCTSSYSTBGWS Direction: Forward Position #: 6 Overlap #: 18 Alignment: YMTGBVSMSCVGGSKCSHCHVGDS -----WSACSRSGCTGSYSTCSW- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 127 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C127 C107 Original Motif Original Motif CKCCYYTHATCCCMG CHBBCCTYBAABCCCDG CBCCYYTVAYCCCHGCH Direction: Backward Position #: 1 Overlap #: 15 Alignment: --CKCCYYTHATCCCMG CHBBCCTYBAABCCCDG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C009 Original Motif Original Motif CBCCYYTVAYCCCHGCH ABGCCTTTAATCCCAGCACTHR ABDCCTTTAATCCCAGCACTHR Direction: Forward Position #: 2 Overlap #: 17 Alignment: -CBCCYYTVAYCCCHGCH---- ABGCCTTTAATCCCAGCACTHR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C083 Original Motif Original Motif ABDCCTTTAATCCCAGCACTHR CKBCCTSYRSCTCMMG HBBCCTBYRVYYCCAGCACTHR Direction: Forward Position #: 1 Overlap #: 16 Alignment: ABDCCTTTAATCCCAGCACTHR CKBCCTSYRSCTCMMG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C058 Combined Motif Original Motif Original Motif HBBCCTBYRVYYCCAGCACTHR CYCCBCSGVCYCCBC HBBCCYCYVVBBCCHSCDCTHR Direction: Forward Position #: 5 Overlap #: 15 Alignment: HBBCCTBYRVYYCCAGCACTHR ----CYCCBCSGVCYCCBC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C022 Combined Motif Original Motif Original Motif HBBCCYCYVVBBCCHSCDCTHR BGCCYCBGSCYCCCSVS HBBCSYCYBVSSCCCCCVCBHR Direction: Forward Position #: 4 Overlap #: 17 Alignment: HBBCCYCYVVBBCCHSCDCTHR ---BGCCYCBGSCYCCCSVS-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 128 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C128 C092 Reverse Complement Reverse Complement SKTCSMSGACASKSAGMS KKTCGMSGCCASKCTGMM BKTCGMSGMCASKCWGMM Direction: Backward Position #: 1 Overlap #: 18 Alignment: SKTCSMSGACASKSAGMS KKTCGMSGCCASKCTGMM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C095 Reverse Complement Original Motif RYCWGRSTGYCSYCGARB KCCAKMSTGGTSKMCAGM DYCAGASTGBYSBCSARH Direction: Forward Position #: 1 Overlap #: 18 Alignment: RYCWGRSTGYCSYCGARB KCCAKMSTGGTSKMCAGM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C004 Combined Motif Reverse Complement Original Motif DMTSGVSKBCASTCTGKH SSSSSCSSSSSCCSSSSCCSCSSSSSS DMTSSVSSCCVSBSYSGCSSCCSCSSSSSS Direction: Forward Position #: 4 Overlap #: 15 Alignment: DMTSGVSKBCASTCTGKH------------ ---SSSSSCSSSSSCCSSSSCCSCSSSSSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C012 Combined Motif Original Motif Reverse Complement DMTSSVSSCCVSBSYSGCSSCCSCSSSSSS YRTCTCTCTCTRYCTCTRR DMTSSVBVYCDSYCTSKVCCYCBVVSSSSS Direction: Forward Position #: 7 Overlap #: 19 Alignment: DMTSSVSSCCVSBSYSGCSSCCSCSSSSSS ------YRTCTCTCTCTRYCTCTRR----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C020 Combined Motif Reverse Complement Reverse Complement SSSSSVVVGKGGVRSAGMSDGMVBVSSARH SGTGGGSGVGGSGGVGSB SSBGGSSGGGGSGGSRSVSDGMVBVSSARH Direction: Forward Position #: 1 Overlap #: 18 Alignment: SSSSSVVVGKGGVRSAGMSDGMVBVSSARH SGTGGGSGVGGSGGVGSB------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 129 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C129 C026 Reverse Complement Reverse Complement RRTCTCKKMMTAGCRY RRTCTCRRRRTCTCRR RRTCTCDDVATMKCRH Direction: Backward Position #: 1 Overlap #: 16 Alignment: RRTCTCKKMMTAGCRY RRTCTCRRRRTCTCRR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C012 Combined Motif Reverse Complement Original Motif HKGYYATBHHGAGAMM MKAGAGMKAGAGAGAGAKM HKGCBAKDVMGAGAVMGAGAKM Direction: Forward Position #: 4 Overlap #: 13 Alignment: HKGYYATBHHGAGAMM------ ---MKAGAGMKAGAGAGAGAKM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C036 Original Motif Original Motif HKGCBAKDVMGAGAVMGAGAKM MKAGMKMGAGAKMKAGMK MBDGMKAGAGHKAGAGMKAGAKM Direction: Forward Position #: 2 Overlap #: 17 Alignment: -HKGCBAKDVMGAGAVMGAGAKM MKAGMKMGAGAKMKAGMK----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C017 Combined Motif Original Motif Original Motif MBDGMKAGAGHKAGAGMKAGAKM WSWGAGASWSAGAGASWS HBWGAGAGAGAGAGASHSAGAKM Direction: Forward Position #: 1 Overlap #: 18 Alignment: MBDGMKAGAGHKAGAGMKAGAKM WSWGAGASWSAGAGASWS----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C013 Original Motif Reverse Complement HBWGAGAGAGAGAGASHSAGAKM YCCTGGTCTACADAGTGAGTTCCAGVW YCCTGDBHKASAGAGWGAGWBCSAGVDM Direction: Forward Position #: 6 Overlap #: 22 Alignment: -----HBWGAGAGAGAGAGASHSAGAKM YCCTGGTCTACADAGTGAGTTCCAGVW- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 130 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C130 C007 Original Motif Original Motif TKCCWGGVCWGCMA KTTSTGAGTTCVAGGMCAGCCTS STTCCAGGMCAGCCWKTTSTGAG Direction: Backward Position #: 2 Overlap #: 14 Alignment: --------TKCCWGGVCWGCMA- KTTSTGAGTTCVAGGMCAGCCTS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C151 Original Motif Reverse Complement STTCCAGGMCAGCCWKTTSTGAG SWBCCWGGYCWGCCWS STKCCWGGHCWGCCWBTTSTGAG Direction: Forward Position #: 1 Overlap #: 16 Alignment: STTCCAGGMCAGCCWKTTSTGAG SWBCCWGGYCWGCCWS------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C128 Original Motif Reverse Complement STKCCWGGHCWGCCWBTTSTGAG SKTCSMSGACASKSAGMS STTCSAGGHCASBCAGHBSTGAG Direction: Forward Position #: 1 Overlap #: 18 Alignment: STKCCWGGHCWGCCWBTTSTGAG SKTCSMSGACASKSAGMS----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C150 Reverse Complement Original Motif CTCASVDCTGBSTGHCCTSGAAS YYCMRSSACASYCARR YCYCASVACWSBCWGDCCTSGAAS Direction: Forward Position #: 2 Overlap #: 15 Alignment: -CTCASVDCTGBSTGHCCTSGAAS YYCMRSSACASYCARR-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C015 Reverse Complement Original Motif STTCSAGGDCWGBSWGTVSTGMGM DVAGCCWKGGCTACAVAGCK DSDKCCAGGDCTRCMHRGVBTGMGM Direction: Forward Position #: 2 Overlap #: 19 Alignment: -STTCSAGGDCWGBSWGTVSTGMGM DVAGCCWKGGCTACAVAGCK----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 131 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C131 C080 Original Motif Original Motif WWAADAARVHAAWW WWAAVAAMMHAAWW WWAADAAAVHAAWW Direction: Forward Position #: 1 Overlap #: 14 Alignment: WWAADAARVHAAWW WWAAVAAMMHAAWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C010 Reverse Complement Reverse Complement WWTTHBTTTDTTWW WWTTTTTTTTTTWWTTTTWWW WWTTWTTTHTTTTDTTTTWWW Direction: Forward Position #: 5 Overlap #: 14 Alignment: ----WWTTHBTTTDTTWW--- WWTTTTTTTTTTWWTTTTWWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C016 Combined Motif Reverse Complement Original Motif WWWAAAADAAAAHAAAWAAWW HWAAWAAAHWAAMAWAMAAWW WWWAWAAAWAAAHAAAMAAAHAAWW Direction: Forward Position #: 5 Overlap #: 17 Alignment: WWWAAAADAAAAHAAAWAAWW---- ----HWAAWAAAHWAAMAWAMAAWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C067 Reverse Complement Reverse Complement WWTTHTTTYTTTDTTTWTTTWTWWW DTTTRKTTTTTTDW WTTTDTTTTTTTDTTTWTTTWTWWW Direction: Forward Position #: 1 Overlap #: 14 Alignment: WWTTHTTTYTTTDTTTWTTTWTWWW DTTTRKTTTTTTDW----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C001 Combined Motif Reverse Complement Original Motif WWWAWAAAWAAADAAAAAAADAAAW WWWAAAAAWWAAAAAWAAAAAWWAAAAHWW WWWAWWAAAAAAWAAAAAAAWAAAAAWWAAAAHWW Direction: Forward Position #: 6 Overlap #: 20 Alignment: WWWAWAAAWAAADAAAAAAADAAAW---------- -----WWWAAAAAWWAAAAAWAAAAAWWAAAAHWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 132 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C132 C013 Reverse Complement Original Motif WCCTKGWTCTCWCMCTGW WVCTGGAACTCACTHTGTAGACCAGGM WVCTGGAACTCMYTBTGYWSACCMKGH Direction: Forward Position #: 10 Overlap #: 18 Alignment: ---------WCCTKGWTCTCWCMCTGW WVCTGGAACTCACTHTGTAGACCAGGM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C036 Combined Motif Reverse Complement Reverse Complement HCYYGGTSWKCABAMRGAGTTCCAGVW RRCTRRRTCTCRRRCTRY HCYYRGHBDDVWCDMRGRSTDCCAGVW Direction: Forward Position #: 5 Overlap #: 18 Alignment: HCYYGGTSWKCABAMRGAGTTCCAGVW ----RRCTRRRTCTCRRRCTRY----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C012 Original Motif Original Motif HCYYRGHBDDVWCDMRGRSTDCCAGVW MKAGAGMKAGAGAGAGAKM HBHBRGMKAGADMDAGRDVTDCCAGVW Direction: Forward Position #: 1 Overlap #: 19 Alignment: HCYYRGHBDDVWCDMRGRSTDCCAGVW MKAGAGMKAGAGAGAGAKM-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C053 Original Motif Original Motif HBHBRGMKAGADMDAGRDVTDCCAGVW RMACRGAGAAAYCCTGKY VHACRGAGARABCBWGDBVTDCCAGVW Direction: Forward Position #: 1 Overlap #: 18 Alignment: HBHBRGMKAGADMDAGRDVTDCCAGVW RMACRGAGAAAYCCTGKY--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C017 Combined Motif Reverse Complement Reverse Complement WVCTGGDAVVHCWBGVTKTCTCKGTDB SWSTCTCTSWSTCTCWSW WVCTGGWVDVTCTSDVTBTCTCWGTDB Direction: Forward Position #: 6 Overlap #: 18 Alignment: WVCTGGDAVVHCWBGVTKTCTCKGTDB -----SWSTCTCTSWSTCTCWSW---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 133 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C133 C057 Original Motif Original Motif AWMAWHDACACHRWMAW WRMARYAAMARYAAMAWH WWMAWHAACAVHAAMAWH Direction: Forward Position #: 1 Overlap #: 17 Alignment: AWMAWHDACACHRWMAW- WRMARYAAMARYAAMAWH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C032 Original Motif Original Motif WWMAWHAACAVHAAMAWH HWAAWYDAAAMWRWAMWR HWAAWYAAAAMHRWAAWD Direction: Forward Position #: 1 Overlap #: 18 Alignment: WWMAWHAACAVHAAMAWH HWAAWYDAAAMWRWAMWR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C062 Reverse Complement Reverse Complement DWTTWKHRTTTTMWTTWH WWDTTWMTRTRKWTYTWW WWDTTTHTDTRTTTTWWTTWH Direction: Forward Position #: 4 Overlap #: 15 Alignment: ---DWTTWKHRTTTTMWTTWH WWDTTWMTRTRKWTYTWW--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C030 Combined Motif Reverse Complement Original Motif HWAAWWAAAAMAHADAAAHWW WYAAAAAMAAAAAAAAWAM HWAAWHAAAAMAMADAAAAAWAM Direction: Forward Position #: 5 Overlap #: 17 Alignment: HWAAWWAAAAMAHADAAAHWW-- ----WYAAAAAMAAAAAAAAWAM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C001 Reverse Complement Reverse Complement YTWTTTTTDTYTYTTTTHWTTWH WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW WWHTTTYTWTTTTTWTTTTTWTTWTTTWWW Direction: Forward Position #: 7 Overlap #: 23 Alignment: ------YTWTTTTTDTYTYTTTTHWTTWH- WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 134 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C134 C003 Reverse Complement Reverse Complement GGGSGGGGBGG GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC KGGVMGGSHGKGSCGGGSBGGGBGGGSSGG Direction: Backward Position #: 15 Overlap #: 11 Alignment: -----GGGSGGGGBGG-------------- GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C008 Combined Motif Reverse Complement Original Motif CCSSCCCBCCCBSCCCGSCYCHSCCYVCCY SSCCSSCCCCSSCCSS CSCCCBCCCCCSCCCCGSCYCHSCCYVCCY Direction: Forward Position #: 1 Overlap #: 16 Alignment: CCSSCCCBCCCBSCCCGSCYCHSCCYVCCY SSCCSSCCCCSSCCSS-------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C104 Combined Motif Original Motif Original Motif CSCCCBCCCCCSCCCCGSCYCHSCCYVCCY SSCCYCCCCDCCSS CSCCCBSSCCCCCCCVSCCCCHSCCYVCCY Direction: Forward Position #: 7 Overlap #: 14 Alignment: CSCCCBCCCCCSCCCCGSCYCHSCCYVCCY ------SSCCYCCCCDCCSS---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C020 Combined Motif Original Motif Original Motif CSCCCBSSCCCCCCCVSCCCCHSCCYVCCY BSCVCCSCCVCSCCCACS SSCSCCSCCCCCCCCVSCCCCHSCCYVCCY Direction: Forward Position #: 1 Overlap #: 18 Alignment: CSCCCBSSCCCCCCCVSCCCCHSCCYVCCY BSCVCCSCCVCSCCCACS------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C023 Original Motif Original Motif SSCSCCSCCCCCCCCVSCCCCHSCCYVCCY SSCCSCBHCSCCSS SSCCCCSCCSCCCCCVSCCCCHSCCYVCCY Direction: Forward Position #: 1 Overlap #: 14 Alignment: SSCSCCSCCCCCCCCVSCCCCHSCCYVCCY SSCCSCBHCSCCSS---------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 135 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C135 C042 Original Motif Original Motif KKCCKAGMACBMASMM WGTCCKRGAACYMACTCW WGTCCKRGAACYMACWCW Direction: Forward Position #: 2 Overlap #: 16 Alignment: -KKCCKAGMACBMASMM- WGTCCKRGAACYMACTCW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C007 Reverse Complement Original Motif WGWGTYMGTTCKYGGACW KTTSTGAGTTCVAGGMCAGCCTS DDWSTBAGTTCBHGGACAGCCTS Direction: Forward Position #: 1 Overlap #: 18 Alignment: WGWGTYMGTTCKYGGACW----- KTTSTGAGTTCVAGGMCAGCCTS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C105 Reverse Complement Reverse Complement SAGGCTGTCCHVGAACTBASWDD TVGGRYGGSBRRGGCA TSDGGCKGBCVDGGMACTBASWDD Direction: Forward Position #: 2 Overlap #: 15 Alignment: -SAGGCTGTCCHVGAACTBASWDD TVGGRYGGSBRRGGCA-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C019 Reverse Complement Original Motif DDWSTBAGTYCCDVGBCRGCCHSA MWYCCCAGCACTTGGGAGGCAG HDYCYBAGYACYBGGGMGGCVVSA Direction: Forward Position #: 1 Overlap #: 22 Alignment: DDWSTBAGTYCCDVGBCRGCCHSA MWYCCCAGCACTTGGGAGGCAG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C077 Combined Motif Reverse Complement Original Motif TSVVGCCYCCCVMGTKCTBMGMDH SBCCCCGGSSCCCCCB TSVVGSVYCCCVVGBBCYSCSMDH Direction: Forward Position #: 6 Overlap #: 16 Alignment: TSVVGCCYCCCVMGTKCTBMGMDH -----SBCCCCGGSSCCCCCB--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 136 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C136 C077 Original Motif Reverse Complement GDGGVKSMHGGGRMT BGGGGGSSCCGGGGBS SGGGGGKSCCSGGRVY Direction: Backward Position #: 2 Overlap #: 15 Alignment: GDGGVKSMHGGGRMT- BGGGGGSSCCGGGGBS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C140 Combined Motif Reverse Complement Reverse Complement MVMCCSGGSYCCCCCS CVDMGGBSSSVGBGGSB MVMCCVVGSYSCCVSSGGSB Direction: Forward Position #: 4 Overlap #: 13 Alignment: MVMCCSGGSYCCCCCS---- ---CVDMGGBSSSVGBGGSB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Reverse Complement Reverse Complement BSCCSSVGGSKSCVVGGRVY GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC BSCCGSVGGGGSSVGGGGBBKGGVMGGSHGKGSC Direction: Forward Position #: 5 Overlap #: 16 Alignment: BSCCSSVGGSKSCVVGGRVY-------------- ----GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C022 Combined Motif Reverse Complement Original Motif GSCYCHSCCYVCCYBBCCCCVSSCCCCVSCGGSB BGCCYCBGSCYCCCSVS GSCYCHSYSYBYCBSSCCCCCSVCCCCVSCGGSB Direction: Forward Position #: 8 Overlap #: 17 Alignment: GSCYCHSCCYVCCYBBCCCCVSSCCCCVSCGGSB -------BGCCYCBGSCYCCCSVS---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C071 Combined Motif Original Motif Original Motif GSCYCHSYSYBYCBSSCCCCCSVCCCCVSCGGSB SVCCACSVSCACCBS GVCCMCSBSCHCCBSSCCCCCSVCCCCVSCGGSB Direction: Forward Position #: 1 Overlap #: 15 Alignment: GSCYCHSYSYBYCBSSCCCCCSVCCCCVSCGGSB SVCCACSVSCACCBS------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 137 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C137 C123 Original Motif Original Motif RAAYTCAGRAAY GAAMTCWGAAATC RAAYTCAGAAATC Direction: Forward Position #: 1 Overlap #: 12 Alignment: RAAYTCAGRAAY- GAAMTCWGAAATC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C053 Original Motif Original Motif RAAYTCAGAAATC RMACRGAGAAAYCCTGKY RAACWSAGAAAYCCTGKY Direction: Forward Position #: 1 Overlap #: 13 Alignment: RAAYTCAGAAATC----- RMACRGAGAAAYCCTGKY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C056 Original Motif Original Motif RAACWSAGAAAYCCTGKY AWMAAAYWRAMAAWH ADMAMABAGAAAHHYTGKY Direction: Forward Position #: 2 Overlap #: 14 Alignment: -RAACWSAGAAAYCCTGKY AWMAAAYWRAMAAWH---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C111 Combined Motif Reverse Complement Reverse Complement MRCAKDHTTTCTBTRTYDT YSGAWKTCAGMWATBA MRCWDGATTTCAGHDWTBD Direction: Forward Position #: 4 Overlap #: 16 Alignment: MRCAKDHTTTCTBTRTYDT ---YSGAWKTCAGMWATBA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C142 Reverse Complement Original Motif DVAWDHCTGAAATCHWGKY WHAAAAAWTAAAAWW WHAAAAHWKAAADHHWGKY Direction: Forward Position #: 1 Overlap #: 15 Alignment: DVAWDHCTGAAATCHWGKY WHAAAAAWTAAAAWW---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 138 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C138 C064 Original Motif Original Motif AAGAAARSAAG DAAAKAAAAMAAK DAAAKAAAAVAAD Direction: Forward Position #: 3 Overlap #: 11 Alignment: --AAGAAARSAAG DAAAKAAAAMAAK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C067 Original Motif Original Motif DAAAKAAAAVAAD WDAAAAAARKAAAD WDAADAAAADAADD Direction: Forward Position #: 1 Overlap #: 13 Alignment: DAAAKAAAAVAAD- WDAAAAAARKAAAD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C043 Combined Motif Original Motif Original Motif WDAADAAAADAADD WWAAWAAAAAARAATW WDAAAAAAADAADDAATW Direction: Forward Position #: 3 Overlap #: 12 Alignment: WDAADAAAADAADD---- --WWAAWAAAAAARAATW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C131 Combined Motif Reverse Complement Reverse Complement WATTHDTTDTTTTTTTDW WWTTHBKTTDTTWW WATTHTTTDTTTTTTWWW Direction: Forward Position #: 4 Overlap #: 14 Alignment: WATTHDTTDTTTTTTTDW ---WWTTHBKTTDTTWW- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C018 Original Motif Reverse Complement WATTHTTTDTTTTTTWWW THTTTTTTTMYTT WWTTDTTTTHTTTTTWWW Direction: Forward Position #: 1 Overlap #: 13 Alignment: WATTHTTTDTTTTTTWWW THTTTTTTTMYTT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 139 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C139 C031 Original Motif Original Motif WWMAAABWWWVAAAAWW WHAAAMRWWYAAAMAWW WWAAAAVWWWVAAAAWW Direction: Backward Position #: 1 Overlap #: 17 Alignment: WWMAAABWWWVAAAAWW WHAAAMRWWYAAAMAWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C001 Combined Motif Reverse Complement Reverse Complement WWTTTTBWWWBTTTTWW WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW WWTTTTTWTTDTTTTTTWTTTTTWWTTTTTWWW Direction: Forward Position #: 4 Overlap #: 14 Alignment: WWTTTTBWWWBTTTTWW---------------- ---WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C010 Combined Motif Reverse Complement Original Motif WWWAAAAAWWAAAAAWAAAAAADAAWAAAAAWW WWWAAAAWWAAAAAAAAAAWW WWWAAAAWWAAAAAAAAAAAWADAAWAAAAAWW Direction: Forward Position #: 1 Overlap #: 21 Alignment: WWWAAAAAWWAAAAAWAAAAAADAAWAAAAAWW WWWAAAAWWAAAAAAAAAAWW------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C069 Combined Motif Original Motif Original Motif WWWAAAAWWAAAAAAAAAAAWADAAWAAAAAWW AHAAMAAYWDYAAMAAHD WWWAAAAAWAAAAAAAAWAAWADAAWAAAAAWW Direction: Forward Position #: 2 Overlap #: 18 Alignment: WWWAAAAWWAAAAAAAAAAAWADAAWAAAAAWW -AHAAMAAYWDYAAMAAHD-------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C016 Combined Motif Original Motif Original Motif WWWAAAAAWAAAAAAAAWAAWADAAWAAAAAWW HWAAWAAAHWAAMAWAMAAWW WWAAAAAAHWAAAAAAAAAAWADAAWAAAAAWW Direction: Forward Position #: 1 Overlap #: 21 Alignment: WWWAAAAAWAAAAAAAAWAAWADAAWAAAAAWW HWAAWAAAHWAAMAWAMAAWW------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 140 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C140 C022 Original Motif Original Motif BSCCBCVSSSBCCYHVG BGCCYCBGSCYCCCSVS BSCCYCVGSSBCCYVVS Direction: Forward Position #: 1 Overlap #: 17 Alignment: BSCCBCVSSSBCCYHVG BGCCYCBGSCYCCCSVS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C004 Combined Motif Original Motif Original Motif BSCCYCVGSSBCCYVVS SSSSSCSSSSSCCSSSSCCSCSSSSSS BSCCBCSSSSSCCCCCSSSSCCSCSSSSSS Direction: Forward Position #: 4 Overlap #: 14 Alignment: BSCCYCVGSSBCCYVVS------------- ---SSSSSCSSSSSCCSSSSCCSCSSSSSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C003 Combined Motif Reverse Complement Reverse Complement SSSSSSGSGGSSSSGGGGGSSSSSGBGGSB GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC SSSSSSGSGGGGGGSSGGGGGGSGGBVGSBHGKGSC Direction: Forward Position #: 7 Overlap #: 24 Alignment: SSSSSSGSGGSSSSGGGGGSSSSSGBGGSB------ ------GSSGGGGGSSGGGGGGKGGVMGGSHGKGSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C037 Combined Motif Original Motif Reverse Complement SSSSSSGSGGGGGGSSGGGGGGSGGBVGSBHGKGSC BVGGYGKSGGYGBCGGVS SSSSSSGSSSGGBGGSGGBGSSGGVSVGSBHGKGSC Direction: Forward Position #: 9 Overlap #: 18 Alignment: SSSSSSGSGGGGGGSSGGGGGGSGGBVGSBHGKGSC --------BVGGYGKSGGYGBCGGVS---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C020 Combined Motif Reverse Complement Original Motif GSCYCHBSCVSVCCSSCBCCSCCBCCSSSCSSSSSS BSCVCCSCCVCSCCCACS GSCBCCSCCVCSCCCVCBCCSCCBCCSSSCSSSSSS Direction: Forward Position #: 1 Overlap #: 18 Alignment: GSCYCHBSCVSVCCSSCBCCSCCBCCSSSCSSSSSS BSCVCCSCCVCSCCCACS------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 141 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C141 C066 Original Motif Original Motif YMATCCYRSYRCTTGKR MAMTCCCMSKGCCTCTK HAMTCCYVSTRCYTSTD Direction: Backward Position #: 1 Overlap #: 17 Alignment: YMATCCYRSYRCTTGKR MAMTCCCMSKGCCTCTK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C086 Original Motif Reverse Complement HAMTCCYVSTRCYTSTD CSTSCCYCWGRCTCCSG CVHBCCYCBKRCYYCBG Direction: Forward Position #: 1 Overlap #: 17 Alignment: HAMTCCYVSTRCYTSTD CSTSCCYCWGRCTCCSG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C019 Combined Motif Original Motif Original Motif CVHBCCYCBKRCYYCBG MWYCCCAGCACTTGGGAGGCAG CVHDCCCCAGSMCTBGGGAGGCAG Direction: Forward Position #: 3 Overlap #: 15 Alignment: CVHBCCYCBKRCYYCBG------- --MWYCCCAGCACTTGGGAGGCAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C011 Reverse Complement Reverse Complement CTGCCTCCCBAGYSCTGGGGDHVG RRTCTCTCTCRRTCTCRR RMTSYCTCYCDAKCBCDRGGGDHVG Direction: Forward Position #: 2 Overlap #: 17 Alignment: -CTGCCTCCCBAGYSCTGGGGDHVG RRTCTCTCTCRRTCTCRR------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C122 Combined Motif Original Motif Original Motif RMTSYCTCYCDAKCBCDRGGGDHVG YAGCCCWGSCWSBCCTR RMTSYMKCCCDGBCDCBSSKGDHVG Direction: Forward Position #: 5 Overlap #: 17 Alignment: RMTSYCTCYCDAKCBCDRGGGDHVG ----YAGCCCWGSCWSBCCTR---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 142 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C142 C001 Original Motif Original Motif WHAAAAAWTAAAAWW WWWAAAAAWWAAAAAWAAAAAWWAAAAHWW WWWAAAAAWWAAAAAWAAAAAWWAAAAHWW Direction: Forward Position #: 15 Overlap #: 15 Alignment: --------------WHAAAAAWTAAAAWW- WWWAAAAAWWAAAAAWAAAAAWWAAAAHWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C139 Combined Motif Reverse Complement Reverse Complement WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW WWTTTTVWWWBTTTYWW WWHTTTBWWWTTTTHWTTTTWWTTTTTWWW Direction: Forward Position #: 1 Overlap #: 17 Alignment: WWHTTTTWWTTTTTWTTTTTWWTTTTTWWW WWTTTTVWWWBTTTYWW------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C010 Combined Motif Reverse Complement Original Motif WWWAAAAAWWAAAAWHAAAAWWWVAAAHWW WWWAAAAWWAAAAAAAAAAWW WWWAAAAWWAAAAAAAAAAAWWWVAAAHWW Direction: Forward Position #: 1 Overlap #: 21 Alignment: WWWAAAAAWWAAAAWHAAAAWWWVAAAHWW WWWAAAAWWAAAAAAAAAAWW--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C016 Combined Motif Reverse Complement Reverse Complement WWHTTTBWWWTTTTTTTTTTTWWTTTTWWW WWTTYTWTYTTWDTTTWTTWH WWHTTTHWWTHTTTTTTTTTTTWTTTHWWW Direction: Forward Position #: 7 Overlap #: 21 Alignment: WWHTTTBWWWTTTTTTTTTTTWWTTTTWWW ------WWTTYTWTYTTWDTTTWTTWH--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C030 Combined Motif Reverse Complement Original Motif WWWHAAAWAAAAAAAAAAAHAWWHAAAHWW WYAAAAAMAAAAAAAAWAM WWWHAAAHAAAAAAAAAAAAAAWHAAAHWW Direction: Forward Position #: 7 Overlap #: 19 Alignment: WWWHAAAWAAAAAAAAAAAHAWWHAAAHWW ------WYAAAAAMAAAAAAAAWAM----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 143 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C143 C009 Reverse Complement Original Motif RRTTAAYSSRAGCARY ABGCCTTTAATCCCAGCACTHR ABRVYTWWHRBVMSMRVHCTHR Direction: Forward Position #: 3 Overlap #: 16 Alignment: --RRTTAAYSSRAGCARY---- ABGCCTTTAATCCCAGCACTHR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C083 Reverse Complement Reverse Complement MHAGHVKYSYVVKHWWAKVMBT CYRGAGSMKSAGGBRG MHAGAGBHBBVGKHWKAKVMBT Direction: Forward Position #: 1 Overlap #: 16 Alignment: MHAGHVKYSYVVKHWWAKVMBT CYRGAGSMKSAGGBRG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C010 Reverse Complement Reverse Complement ABRVYTYWHYCBBBDBCTCTDR WWTTTTTTTTTTWWTTTTWWW WWTTDTKBYTTTHHYTYYDHHTCTDR Direction: Forward Position #: 5 Overlap #: 17 Alignment: ----ABRVYTYWHYCBBBDBCTCTDR WWTTTTTTTTTTWWTTTTWWW----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C057 Original Motif Reverse Complement WWTTDTKBYTTTHHYTYYDHHTCTDR HWTRTTMKTYTTMKTYKW WWTDTTHBTTTTHDTTKHDHHTCTDR Direction: Forward Position #: 1 Overlap #: 18 Alignment: WWTTDTKBYTTTHHYTYYDHHTCTDR HWTRTTMKTYTTMKTYKW-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C007 Reverse Complement Reverse Complement MHAGADHDHRAADHAAAAVHAADAWW SAGGCTGYCCTVGAACTCASAAY SAGSCWGHCCTVGAACTMAVAAHAADAWW Direction: Forward Position #: 4 Overlap #: 20 Alignment: ---MHAGADHDHRAADHAAAAVHAADAWW SAGGCTGYCCTVGAACTCASAAY------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 144 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C144 C005 Original Motif Original Motif GACCAGRSYRGYCTC TCTGTAGMCCAGGCTGGCCTYGW GWGACCAGGCTGGCCTCTCTGTA Direction: Backward Position #: 3 Overlap #: 15 Alignment: ------GACCAGRSYRGYCTC-- TCTGTAGMCCAGGCTGGCCTYGW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C126 Original Motif Original Motif GWGACCAGGCTGGCCTCTCTGTA SVWGRCSMKSCTGGYS SRWGRCCAGGCTGGYCTCTCTGTA Direction: Forward Position #: 2 Overlap #: 15 Alignment: -GWGACCAGGCTGGCCTCTCTGTA SVWGRCSMKSCTGGYS-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C073 Original Motif Original Motif SRWGRCCAGGCTGGYCTCTCTGTA YMWGSMYAGCCRKSKCTR BVWGVCCAGSCDGGBCTVTCTGTA Direction: Forward Position #: 1 Overlap #: 18 Alignment: SRWGRCCAGGCTGGYCTCTCTGTA YMWGSMYAGCCRKSKCTR------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C122 Original Motif Reverse Complement BVWGVCCAGSCDGGBCTVTCTGTA MAGGVSWGSCWGGGCTK VAGGVCHRGCHKGGCYKVTCTGTA Direction: Forward Position #: 1 Overlap #: 17 Alignment: BVWGVCCAGSCDGGBCTVTCTGTA MAGGVSWGSCWGGGCTK------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C124 Combined Motif Reverse Complement Reverse Complement TACAGAVRMGCCYDGCMHGVCCTV WSGASKSCAGCSMSGTSW TACAGAVRASBCCAGCVMSGYBTV Direction: Forward Position #: 6 Overlap #: 18 Alignment: TACAGAVRMGCCYDGCMHGVCCTV -----WSGASKSCAGCSMSGTSW- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 145 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C145 C133 Original Motif Original Motif WWCADCAMCHAMWW AWMAWHDACACHRWMAW MAWWWMAWCAMCAMMDW Direction: Backward Position #: 4 Overlap #: 14 Alignment: WWCADCAMCHAMWW--- AWMAWHDACACHRWMAW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C131 Reverse Complement Reverse Complement WDRYTGYTGWTRWWWTY WWTTHBKTTDTTWW WWTTHKTTKDTKWWWTY Direction: Forward Position #: 1 Overlap #: 14 Alignment: WDRYTGYTGWTRWWWTY WWTTHBKTTDTTWW--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C057 Combined Motif Reverse Complement Original Motif MAWWWRADRAAYHAAWW WRMARYAAMARYAAMAWH MAWWWAADHAAMAAHAAMAWH Direction: Forward Position #: 4 Overlap #: 14 Alignment: MAWWWRADRAAYHAAWW---- ---WRMARYAAMARYAAMAWH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C080 Reverse Complement Reverse Complement HWTRTTHTTRTTHDTTWWWTY WWTTHRYTTBTTWW WWTDHDYTTDTTWWTTWWWTY Direction: Forward Position #: 1 Overlap #: 14 Alignment: HWTRTTHTTRTTHDTTWWWTY WWTTHRYTTBTTWW------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C010 Combined Motif Original Motif Reverse Complement WWTDHDYTTDTTWWTTWWWTY WWTTTTTTTTTTWWTTTTWWW WWTDWWTTTTTTTTTTWWTTYTWWW Direction: Forward Position #: 5 Overlap #: 17 Alignment: WWTDHDYTTDTTWWTTWWWTY---- ----WWTTTTTTTTTTWWTTTTWWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 146 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C146 C015 Original Motif Original Motif YRGCSAGGGSTAYR DVAGCCWKGGCTACAVAGCK VAGCKHAGCCAGGGCTAYAD Direction: Backward Position #: 6 Overlap #: 14 Alignment: -YRGCSAGGGSTAYR----- DVAGCCWKGGCTACAVAGCK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C073 Combined Motif Original Motif Original Motif VAGCKHAGCCAGGGCTAYAD YMWGSMYAGCCRKSKCTR VAGCBMAGCCHRGSCDRCDHTR Direction: Forward Position #: 5 Overlap #: 16 Alignment: VAGCKHAGCCAGGGCTAYAD-- ----YMWGSMYAGCCRKSKCTR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C005 Original Motif Reverse Complement VAGCBMAGCCHRGSCDRCDHTR WCKAGGCCAGCCTGGYCTACAGA WCBAGSYCAGCCTGGBCTACABDR Direction: Forward Position #: 3 Overlap #: 21 Alignment: --VAGCBMAGCCHRGSCDRCDHTR WCKAGGCCAGCCTGGYCTACAGA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C078 Combined Motif Original Motif Reverse Complement WCBAGSYCAGCCTGGBCTACABDR KMTCKCTCTMTCKM RGMYYKSTCTAYVBHWCBAGSYCA Direction: Backward Position #: 2 Overlap #: 14 Alignment: WCBAGSYCAGCCTGGBCTACABDR ---------KMTCKCTCTMTCKM- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 147 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C147 C015 Reverse Complement Reverse Complement CKCTGYGTAGYCCWKG RGCTVTGTAGCCYWGGCTVD VKCTGYGTAGYCCWGGCTVD Direction: Forward Position #: 1 Overlap #: 16 Alignment: CKCTGYGTAGYCCWKG---- RGCTVTGTAGCCYWGGCTVD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C013 Combined Motif Reverse Complement Reverse Complement DVAGCCWGGKCTACMCAGYV YCCTGGTCTACADAGTGAGTTCCAGVW DVABCCTGGTCTACABAGTGAGTTCCAGVW Direction: Forward Position #: 4 Overlap #: 17 Alignment: DVAGCCWGGKCTACMCAGYV---------- ---YCCTGGTCTACADAGTGAGTTCCAGVW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C034 Combined Motif Original Motif Reverse Complement DVABCCTGGTCTACABAGTGAGTTCCAGVW SCTCTRSCTCCSCAGTGS DSMKCYDGSTCYVCAGWGBGAGTTCCAGVW Direction: Forward Position #: 2 Overlap #: 18 Alignment: DVABCCTGGTCTACABAGTGAGTTCCAGVW -SCTCTRSCTCCSCAGTGS----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C019 Original Motif Original Motif DSMKCYDGSTCYVCAGWGBGAGTTCCAGVW MWYCCCAGCACTTGGGAGGCAG HHHYCYAGCWCTDSRGAGGSAGTTCCAGVW Direction: Forward Position #: 1 Overlap #: 22 Alignment: DSMKCYDGSTCYVCAGWGBGAGTTCCAGVW MWYCCCAGCACTTGGGAGGCAG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C012 Combined Motif Original Motif Original Motif HHHYCYAGCWCTDSRGAGGSAGTTCCAGVW MKAGAGMKAGAGAGAGAKM HHHYCYVGVDMKVBRGAGVSAGWTCCAGVW Direction: Forward Position #: 7 Overlap #: 19 Alignment: HHHYCYAGCWCTDSRGAGGSAGTTCCAGVW ------MKAGAGMKAGAGAGAGAKM----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 148 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C148 C020 Original Motif Original Motif SCMSBGACACHGSCAS BSCVCCSCCVCSCCCACS BSCMCCGMCACBSCCASS Direction: Forward Position #: 2 Overlap #: 16 Alignment: -SCMSBGACACHGSCAS- BSCVCCSCCVCSCCCACS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C125 Reverse Complement Reverse Complement SSTGGSBGTGYCGGYGSB SYSTWKCTSTMWSTRS SBSTRGSKSTRYSKGBGSB Direction: Forward Position #: 2 Overlap #: 15 Alignment: -SSTGGSBGTGYCGGYGSB SYSTWKCTSTMWSTRS--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C004 Original Motif Reverse Complement SBSTRGSKSTRYSKGBGSB SSSSSSGSGGSSSSGGSSSSSGSSSSS SSSSSSSSKGSSBSKGBSKSSGSSSSS Direction: Forward Position #: 6 Overlap #: 19 Alignment: -----SBSTRGSKSTRYSKGBGSB--- SSSSSSGSGGSSSSGGSSSSSGSSSSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C128 Combined Motif Original Motif Original Motif SSSSSSSSKGSSBSKGBSKSSGSSSSS SYCTSRSTGTCSYSGARS SSSSSSBCTSRSKGTSSBSGVGSSSSS Direction: Forward Position #: 6 Overlap #: 18 Alignment: SSSSSSSSKGSSBSKGBSKSSGSSSSS -----SYCTSRSTGTCSYSGARS---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C037 Combined Motif Reverse Complement Original Motif SSSSSCBCSBSSACRSMSAGBSSSSSS SVCCGBCMCCSYCMCCVB SSSSSSDCCBSCMCMSBCASCSSSSSS Direction: Forward Position #: 6 Overlap #: 18 Alignment: SSSSSCBCSBSSACRSMSAGBSSSSSS -----SVCCGBCMCCSYCMCCVB---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 149 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C149 C007 Original Motif Reverse Complement TKAACTCAGRMR SAGGCTGYCCTVGAACTCASAAY GAACTCASAAYBDRRCTSWSMHR Direction: Backward Position #: 12 Overlap #: 12 Alignment: TKAACTCAGRMR----------- SAGGCTGYCCTVGAACTCASAAY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C111 Reverse Complement Original Motif KHRSWSAGMMDBKTTSTGAGTTC TBATWYCTGARWTCSM TBADVYCWGMVDTBBHSTGAGTTC Direction: Forward Position #: 2 Overlap #: 15 Alignment: -KHRSWSAGMMDBKTTSTGAGTTC TBATWYCTGARWTCSM-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C013 Reverse Complement Original Motif GAACTCASHBBADBYCWGMBHTBA WVCTGGAACTCACTHTGTAGACCAGGM WVCTGGAACTCACTBTRTHKMHSAGBHBA Direction: Forward Position #: 6 Overlap #: 22 Alignment: -----GAACTCASHBBADBYCWGMBHTBA WVCTGGAACTCACTHTGTAGACCAGGM-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C011 Reverse Complement Reverse Complement TBHBCTSDRYHAMABAGTGAGTTCCAGVW RRTCTCTCTCRRTCTCRR RRTBTHBCTSRRTHWCRDAGTGAGTTCCAGVW Direction: Forward Position #: 4 Overlap #: 15 Alignment: ---TBHBCTSDRYHAMABAGTGAGTTCCAGVW RRTCTCTCTCRRTCTCRR-------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C099 Reverse Complement Original Motif WVCTGGAACTCACTHKGWDAMMSAGVDABAKM MYCCCMGCACTCKGGARK MHCCYVGMACTCWSBADGWDAMMSAGVDABAKM Direction: Forward Position #: 2 Overlap #: 17 Alignment: -WVCTGGAACTCACTHKGWDAMMSAGVDABAKM MYCCCMGCACTCKGGARK--------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 150 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C150 C128 Reverse Complement Original Motif KKTGKSTGTSSKRGMM SYCTSRSTGTCSYSGARS SKBTGDSTGTCSTVGAAS Direction: Forward Position #: 2 Overlap #: 16 Alignment: -KKTGKSTGTSSKRGMM- SYCTSRSTGTCSYSGARS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C028 Reverse Complement Reverse Complement STTCVASGACASHCABRS VBTSVCTSTGSSTCVB SBTSVVBSWSVSTCABRS Direction: Forward Position #: 1 Overlap #: 16 Alignment: STTCVASGACASHCABRS VBTSVCTSTGSSTCVB-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C037 Original Motif Reverse Complement SBTSVVBSWSVSTCABRS BVGGYGKSGGYGBCGGVS SBKSBGBSDSHGBCRGVS Direction: Forward Position #: 1 Overlap #: 18 Alignment: SBTSVVBSWSVSTCABRS BVGGYGKSGGYGBCGGVS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C002 Combined Motif Original Motif Reverse Complement SBKSBGBSDSHGBCRGVS MKKTKKGTGTGTGTGTGTKKKTA SVKGTGKGTGTGTSKGHSTKKKTA Direction: Forward Position #: 2 Overlap #: 17 Alignment: SBKSBGBSDSHGBCRGVS------ -MKKTKKGTGTGTGTGTGTKKKTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C042 Reverse Complement Original Motif TAYRYASHCRSACACACRCACRVS WGTCCKRGAACYMACTCW WGTMYDVRMACHMACWCWCRCACRVS Direction: Forward Position #: 3 Overlap #: 16 Alignment: --TAYRYASHCRSACACACRCACRVS WGTCCKRGAACYMACTCW-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 151 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C151 C007 Original Motif Reverse Complement SWGGCWGKCCWGGVWS SAGGCTGYCCTVGAACTCASAAY SAGGCTGBCSKVDRDCYHVGAAB Direction: Forward Position #: 8 Overlap #: 16 Alignment: -------SWGGCWGKCCWGGVWS SAGGCTGYCCTVGAACTCASAAY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C128 Combined Motif Reverse Complement Reverse Complement BTTCBDMGDKHVRSGBCAGCCTS SKTCSMSGACASKSAGMS BTTSKDCGHBVRCVVKCAGCCTS Direction: Forward Position #: 4 Overlap #: 18 Alignment: BTTCBDMGDKHVRSGBCAGCCTS ---SKTCSMSGACASKSAGMS-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C096 Original Motif Reverse Complement BTTSKDCGHBVRCVVKCAGCCTS RKGGCMMGSCKRGRKY RKGDYCHGCSDGGRBHVKCAGCCTS Direction: Forward Position #: 3 Overlap #: 14 Alignment: --BTTSKDCGHBVRCVVKCAGCCTS RKGGCMMGSCKRGRKY--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C107 Combined Motif Original Motif Reverse Complement RKGDYCHGCSDGGRBHVKCAGCCTS CDGGGBTTVMAGGVBHG VKGGBBBKVVVGGVBHGKCAGCCTS Direction: Forward Position #: 1 Overlap #: 17 Alignment: RKGDYCHGCSDGGRBHVKCAGCCTS CDGGGBTTVMAGGVBHG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C092 Combined Motif Original Motif Reverse Complement VKGGBBBKVVVGGVBHGKCAGCCTS KKTCGMSGCCASKCTGMM VKGGBBKKSVMGGMCASKCWGMCTS Direction: Forward Position #: 6 Overlap #: 18 Alignment: VKGGBBBKVVVGGVBHGKCAGCCTS -----KKTCGMSGCCASKCTGMM-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 152 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C152 C079 Original Motif Original Motif KWRRKWRARAWMRAWM ADAAAKWAAAAWAKARW ADAAAKWAAAAWADAAA Direction: Forward Position #: 2 Overlap #: 16 Alignment: -KWRRKWRARAWMRAWM ADAAAKWAAAAWAKARW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C043 Combined Motif Original Motif Original Motif ADAAAKWAAAAWADAAA WWAAWAAAAAARAATW ADAAARAAAAAAARRAATW Direction: Forward Position #: 4 Overlap #: 14 Alignment: ADAAAKWAAAAWADAAA-- ---WWAAWAAAAAARAATW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C016 Original Motif Original Motif ADAAARAAAAAAARRAATW HWAAWAAAHWAAMAWAMAAWW HWAAWAAAHWAAAAAAAAAAWTW Direction: Forward Position #: 5 Overlap #: 17 Alignment: ----ADAAARAAAAAAARRAATW HWAAWAAAHWAAMAWAMAAWW-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C001 Combined Motif Original Motif Original Motif HWAAWAAAHWAAAAAAAAAAWTW WWWAAAAAWWAAAAAWAAAAAWWAAAAHWW HWAAWWAAAAAAAAAAAAAWAAAAAWWAAAAHWW Direction: Forward Position #: 5 Overlap #: 19 Alignment: HWAAWAAAHWAAAAAAAAAAWTW----------- ----WWWAAAAAWWAAAAAWAAAAAWWAAAAHWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C030 Combined Motif Reverse Complement Reverse Complement WWHTTTTWWTTTTTWTTTTTTTTTTTTTWWTTWH YTWTTTTTTTTYTTTTTMW WWHTWTTTTTTTTTTTTTTWWTTTTTTTWWTTWH Direction: Forward Position #: 3 Overlap #: 19 Alignment: WWHTTTTWWTTTTTWTTTTTTTTTTTTTWWTTWH --YTWTTTTTTTTYTTTTTMW------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *************************************************************** Combined Motifs for Top Best Match Motif ID 153 and Its Best Matches ************************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C153 C092 Original Motif Original Motif YYAGRVTGGCBYTGR RYCAGRSTGGCSYCGARY RYCAGRSTGGCSYYGRRY Direction: Forward Position #: 2 Overlap #: 15 Alignment: -YYAGRVTGGCBYTGR-- RYCAGRSTGGCSYCGARY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C128 Reverse Complement Reverse Complement KKKCMMSGCCASKCTGMM SKTCSMSGACASKSAGMS BKTCVMSGMCASKCWGMM Direction: Forward Position #: 1 Overlap #: 18 Alignment: KKKCMMSGCCASKCTGMM SKTCSMSGACASKSAGMS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- C150 Combined Motif Original Motif Original Motif BKTCVMSGMCASKCWGMM YYCMRSSACASYCARR BYTCMASGACASBCAGVM Direction: Forward Position #: 2 Overlap #: 16 Alignment: BKTCVMSGMCASKCWGMM -YYCMRSSACASYCARR- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C005 Original Motif Original Motif BYTCMASGACASBCAGVM TCTGTAGMCCAGGCTGGCCTYGW BYTSHAGVMCAGGCWGRCCTYGW Direction: Forward Position #: 1 Overlap #: 18 Alignment: BYTCMASGACASBCAGVM----- TCTGTAGMCCAGGCTGGCCTYGW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif C148 Original Motif Original Motif BYTSHAGVMCAGGCWGRCCTYGW SCMSBGACACHGSCAS BCHSBRRCACMGSCWGRCCTYGW Direction: Forward Position #: 1 Overlap #: 16 Alignment: BYTSHAGVMCAGGCWGRCCTYGW SCMSBGACACHGSCAS------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Results created by MOTIFSIM on 06-18-2018 16:00:12 Runtime: 1179.17 seconds MOTIFSIM is written by Ngoc Tam L. 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