MOTIFSIM - MOTIF SIMilarity Detection Tool

Version 2.2

INPUT

Input Parameters
Number of files: 4
Number of top significant motifs: 10
Number of best matches: 5
Similarity cutoff >= 0.75
Matching motif database: UniProbe Mus Musculus
Motif tree: Yes
Combined similar motifs: Yes
Output file type: All
Output file format: All

Input files and motif counts
File name Count of motifs Dataset number
DREME_DM254.txt 45 1
MEME-CHIP_DM254.txt 24 2
PScanChIP_DM254.txt 63 3
RSAT_peak-motifs_DM254.txt 39 4

RESULTS

Top 10 Significant Motifs - Global Matching (Highest to Lowest)

Dataset #: 2 Motif ID: 46 Motif name: Motif 46

Original motif     Consensus sequence: AGRKGGCR Reverse complement motif     Consensus sequence: KGCCYKCT

Best Matches for Top Significant Motif ID 46 (Highest to Lowest)

Dataset #: 1
Motif ID: 1
Motif name: Motif 1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0

Alignment:
AGRKGGCR
AGRKGGCR

Original motif     Consensus sequence: AGRKGGCR Reverse complement motif     Consensus sequence: KGCCYKCT


Dataset #: 4
Motif ID: 147
Motif name: asCAGrkGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.00651548

Alignment:
ASCAGRGGGCRSB
---AGRKGGCR--

Original motif     Consensus sequence: ASCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCMCTGST


Dataset #: 4
Motif ID: 165
Motif name: wgGCCAshAGrGGGCrsy
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 9
Number of overlap: 8
Similarity score: 0.0102443

Alignment:
KBKGCCCKCTHGTGGCHH
--KGCCYKCT--------

Original motif     Consensus sequence: HDGCCACHAGRGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCKCTHGTGGCHH


Dataset #: 4
Motif ID: 166
Motif name: CasCAGrGGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.0104954

Alignment:
CACCAGRGGGCRSB
----AGRKGGCR--

Original motif     Consensus sequence: CACCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCKCTGGTG


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0165822

Alignment:
KBKGCCCTCTYCTGGCCHV
--KGCCYKCT---------

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 1 Motif ID: 8 Motif name: Motif 8

Original motif     Consensus sequence: AAATAH Reverse complement motif     Consensus sequence: DTATTT

Best Matches for Top Significant Motif ID 8 (Highest to Lowest)

Dataset #: 4
Motif ID: 150
Motif name: waATwAAAATAww
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.00224204

Alignment:
DHATWAAAATAHD
------AAATAH-

Original motif     Consensus sequence: DHATWAAAATAHD Reverse complement motif     Consensus sequence: DHTATTTTWATHD


Dataset #: 4
Motif ID: 157
Motif name: wtATTTTTAww
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.00556446

Alignment:
WWTAAAAATAD
-----AAATAH

Original motif     Consensus sequence: DTATTTTTAWW Reverse complement motif     Consensus sequence: WWTAAAAATAD


Dataset #: 2
Motif ID: 68
Motif name: Motif 68
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 6
Similarity score: 0.0128826

Alignment:
WAAWAAAWAWWWAA
----AAATAH----

Original motif     Consensus sequence: WAAWAAAWAWWWAA Reverse complement motif     Consensus sequence: TTWWWTWTTTWTTW


Dataset #: 2
Motif ID: 52
Motif name: Motif 52
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0.0167304

Alignment:
AAATAAAW
AAATAH--

Original motif     Consensus sequence: AAATAAAW Reverse complement motif     Consensus sequence: WTTTATTT


Dataset #: 3
Motif ID: 118
Motif name: SRF
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.0210491

Alignment:
GCCCATATATGG
----AAATAH--

Original motif     Consensus sequence: GCCCATATATGG Reverse complement motif     Consensus sequence: CCATATATGGGC


Dataset #: 1 Motif ID: 20 Motif name: Motif 20

Original motif     Consensus sequence: CACGTR Reverse complement motif     Consensus sequence: MACGTG

Best Matches for Top Significant Motif ID 20 (Highest to Lowest)

Dataset #: 3
Motif ID: 71
Motif name: Arnt
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0

Alignment:
CACGTG
CACGTR

Original motif     Consensus sequence: CACGTG Reverse complement motif     Consensus sequence: CACGTG


Dataset #: 3
Motif ID: 95
Motif name: MYCMAX
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 6
Similarity score: 0.0102183

Alignment:
RASCACGTGGT
---MACGTG--

Original motif     Consensus sequence: RASCACGTGGT Reverse complement motif     Consensus sequence: ACCACGTGSTM


Dataset #: 3
Motif ID: 91
Motif name: MAX
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 6
Similarity score: 0.011152

Alignment:
DAHCACGTGD
---CACGTR-

Original motif     Consensus sequence: DAHCACGTGD Reverse complement motif     Consensus sequence: BCACGTGDTD


Dataset #: 3
Motif ID: 126
Motif name: USF1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.0131944

Alignment:
MCACGTG
-CACGTR

Original motif     Consensus sequence: CACGTGR Reverse complement motif     Consensus sequence: MCACGTG


Dataset #: 3
Motif ID: 94
Motif name: Myc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.0253396

Alignment:
DCCACGTGCV
--CACGTR--

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV


Dataset #: 1 Motif ID: 1 Motif name: Motif 1

Original motif     Consensus sequence: AGRKGGCR Reverse complement motif     Consensus sequence: KGCCYKCT

Best Matches for Top Significant Motif ID 1 (Highest to Lowest)

Dataset #: 2
Motif ID: 46
Motif name: Motif 46
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0

Alignment:
AGRKGGCR
AGRKGGCR

Original motif     Consensus sequence: AGRKGGCR Reverse complement motif     Consensus sequence: KGCCYKCT


Dataset #: 4
Motif ID: 147
Motif name: asCAGrkGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.00628523

Alignment:
ASCAGRGGGCRSB
---AGRKGGCR--

Original motif     Consensus sequence: ASCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCMCTGST


Dataset #: 4
Motif ID: 165
Motif name: wgGCCAshAGrGGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0102152

Alignment:
HDGCCACHAGRGGGCRBY
--------AGRKGGCR--

Original motif     Consensus sequence: HDGCCACHAGRGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCKCTHGTGGCHH


Dataset #: 4
Motif ID: 166
Motif name: CasCAGrGGGCrsy
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0106761

Alignment:
BSKGCCCKCTGGTG
--KGCCYKCT----

Original motif     Consensus sequence: CACCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCKCTGGTG


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.016658

Alignment:
KBKGCCCTCTYCTGGCCHV
--KGCCYKCT---------

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 4
Motif ID: 164
Motif name: asyAGrkGGCRGCAga
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0201849

Alignment:
ASYAGRKGGCAGCABH
---AGRKGGCR-----

Original motif     Consensus sequence: ASYAGRKGGCAGCABH Reverse complement motif     Consensus sequence: HBTGCTGCCYMCTKST


Dataset #: 3 Motif ID: 127 Motif name: YY1

Original motif     Consensus sequence: RCCATB Reverse complement motif     Consensus sequence: BATGGM

Best Matches for Top Significant Motif ID 127 (Highest to Lowest)

Dataset #: 2
Motif ID: 61
Motif name: Motif 61
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.00122549

Alignment:
AGATGGY
BATGGM-

Original motif     Consensus sequence: AGATGGY Reverse complement motif     Consensus sequence: KCCATCT


Dataset #: 1
Motif ID: 12
Motif name: Motif 12
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.00857843

Alignment:
GATGGCTC
--BATGGM

Original motif     Consensus sequence: GATGGCTC Reverse complement motif     Consensus sequence: GAGCCATC


Dataset #: 4
Motif ID: 145
Motif name: grCCACyAGAkG
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.022036

Alignment:
CYTCTKGTGGHH
-----BATGGM-

Original motif     Consensus sequence: DDCCACYAGAKG Reverse complement motif     Consensus sequence: CYTCTKGTGGHH


Dataset #: 4
Motif ID: 138
Motif name: grCCACyAGAkG
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.0223679

Alignment:
DDCCACYAGAKG
-RCCATB-----

Original motif     Consensus sequence: DDCCACYAGAKG Reverse complement motif     Consensus sequence: CYTCTMGTGGHH


Dataset #: 4
Motif ID: 156
Motif name: rgyGCCMyCTksTGGccd
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 6
Similarity score: 0.0275501

Alignment:
DDGCCASYAGMGGGCKVM
--RCCATB----------

Original motif     Consensus sequence: RVYGCCCYCTKSTGGCHD Reverse complement motif     Consensus sequence: DDGCCASYAGMGGGCKVM


Dataset #: 2 Motif ID: 48 Motif name: Motif 48

Original motif     Consensus sequence: CCACYAGR Reverse complement motif     Consensus sequence: MCTKGTGG

Best Matches for Top Significant Motif ID 48 (Highest to Lowest)

Dataset #: 1
Motif ID: 21
Motif name: Motif 21
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.00903109

Alignment:
CCACYAGG
CCACYAGR

Original motif     Consensus sequence: CCACYAGG Reverse complement motif     Consensus sequence: CCTKGTGG


Dataset #: 4
Motif ID: 145
Motif name: grCCACyAGAkG
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0155354

Alignment:
DDCCACYAGAKG
--CCACYAGR--

Original motif     Consensus sequence: DDCCACYAGAKG Reverse complement motif     Consensus sequence: CYTCTKGTGGHH


Dataset #: 4
Motif ID: 158
Motif name: grCCACwAGrk
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0192652

Alignment:
DDCCACWAGRK
--CCACYAGR-

Original motif     Consensus sequence: DDCCACWAGRK Reverse complement motif     Consensus sequence: YMCTWGTGGHH


Dataset #: 4
Motif ID: 138
Motif name: grCCACyAGAkG
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0244381

Alignment:
DDCCACYAGAKG
--CCACYAGR--

Original motif     Consensus sequence: DDCCACYAGAKG Reverse complement motif     Consensus sequence: CYTCTMGTGGHH


Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 9
Number of overlap: 8
Similarity score: 0.0284404

Alignment:
BMSMGCCYMCTKSTGGMHM
--------MCTKGTGG---

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 2 Motif ID: 65 Motif name: Motif 65

Original motif     Consensus sequence: ARAACA Reverse complement motif     Consensus sequence: TGTTMT

Best Matches for Top Significant Motif ID 65 (Highest to Lowest)

Dataset #: 4
Motif ID: 141
Motif name: raCAAAACam
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 6
Similarity score: 0.00122368

Alignment:
DACAAAACAH
---ARAACA-

Original motif     Consensus sequence: DACAAAACAH Reverse complement motif     Consensus sequence: HTGTTTTGTD


Dataset #: 1
Motif ID: 44
Motif name: Motif 44
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.0101983

Alignment:
GDAAACA
-ARAACA

Original motif     Consensus sequence: GDAAACA Reverse complement motif     Consensus sequence: TGTTTDC


Dataset #: 4
Motif ID: 159
Motif name: kkAAGAGCAsy
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 6
Similarity score: 0.0232212

Alignment:
HVTGCTCTTBH
--TGTTMT---

Original motif     Consensus sequence: DBAAGAGCAVH Reverse complement motif     Consensus sequence: HVTGCTCTTBH


Dataset #: 3
Motif ID: 121
Motif name: TAL1TCF3
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 7
Number of overlap: 6
Similarity score: 0.0330056

Alignment:
HVAMCATCTGKT
ARAACA------

Original motif     Consensus sequence: HVAMCATCTGKT Reverse complement motif     Consensus sequence: ARCAGATGRTVD


Dataset #: 1
Motif ID: 2
Motif name: Motif 2
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.0333069

Alignment:
AAAAHAAA
ARAACA--

Original motif     Consensus sequence: AAAAHAAA Reverse complement motif     Consensus sequence: TTTDTTTT


Dataset #: 1 Motif ID: 5 Motif name: Motif 5

Original motif     Consensus sequence: CCCCDCCC Reverse complement motif     Consensus sequence: GGGDGGGG

Best Matches for Top Significant Motif ID 5 (Highest to Lowest)

Dataset #: 2
Motif ID: 59
Motif name: Motif 59
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.00363191

Alignment:
CCCCRCCC
CCCCDCCC

Original motif     Consensus sequence: CCCCRCCC Reverse complement motif     Consensus sequence: GGGKGGGG


Dataset #: 4
Motif ID: 155
Motif name: csCSCCdCCCcs
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.00464015

Alignment:
VDGGGDGGGGBV
--GGGDGGGG--

Original motif     Consensus sequence: VBCCCCDCCCHV Reverse complement motif     Consensus sequence: VDGGGDGGGGBV


Dataset #: 3
Motif ID: 89
Motif name: Klf4
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0352587

Alignment:
GCCYCMCCCD
-CCCCDCCC-

Original motif     Consensus sequence: DGGGYGKGGC Reverse complement motif     Consensus sequence: GCCYCMCCCD


Dataset #: 4
Motif ID: 154
Motif name: csCsCCTCCcc
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0361349

Alignment:
BDGGAGGGGBV
-GGGDGGGG--

Original motif     Consensus sequence: VBCCCCTCCHB Reverse complement motif     Consensus sequence: BDGGAGGGGBV


Dataset #: 3
Motif ID: 116
Motif name: SP1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0368066

Alignment:
CCCCKCCCCC
CCCCDCCC--

Original motif     Consensus sequence: CCCCKCCCCC Reverse complement motif     Consensus sequence: GGGGGYGGGG


Dataset #: 3 Motif ID: 72 Motif name: ArntAhr

Original motif     Consensus sequence: YGCGTG Reverse complement motif     Consensus sequence: CACGCM

Best Matches for Top Significant Motif ID 72 (Highest to Lowest)

Dataset #: 4
Motif ID: 134
Motif name: ssCGwGCGss
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 6
Similarity score: 0.0128947

Alignment:
BSCGWGCGBV
YGCGTG----

Original motif     Consensus sequence: BSCGWGCGBV Reverse complement motif     Consensus sequence: VBCGCWCGSB


Dataset #: 1
Motif ID: 20
Motif name: Motif 20
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0.0206428

Alignment:
MACGTG
YGCGTG

Original motif     Consensus sequence: CACGTR Reverse complement motif     Consensus sequence: MACGTG


Dataset #: 1
Motif ID: 42
Motif name: Motif 42
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.0259081

Alignment:
CSGCGCG
YGCGTG-

Original motif     Consensus sequence: CGCGCSG Reverse complement motif     Consensus sequence: CSGCGCG


Dataset #: 4
Motif ID: 152
Motif name: yrCATGCAyr
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 6
Similarity score: 0.0279287

Alignment:
BRCATGCABD
--CACGCM--

Original motif     Consensus sequence: BRCATGCABD Reverse complement motif     Consensus sequence: HVTGCATGKV


Dataset #: 2
Motif ID: 57
Motif name: Motif 57
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.0315171

Alignment:
ACACACAY
-CACGCM-

Original motif     Consensus sequence: ACACACAY Reverse complement motif     Consensus sequence: KTGTGTGT


Dataset #: 3 Motif ID: 101 Motif name: NFIC

Original motif     Consensus sequence: TTGGCD Reverse complement motif     Consensus sequence: DGCCAA

Best Matches for Top Significant Motif ID 101 (Highest to Lowest)

Dataset #: 4
Motif ID: 165
Motif name: wgGCCAshAGrGGGCrsy
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 12
Number of overlap: 6
Similarity score: 0.0215379

Alignment:
HDGCCACHAGRGGGCRBY
-DGCCAA-----------

Original motif     Consensus sequence: HDGCCACHAGRGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCKCTHGTGGCHH


Dataset #: 4
Motif ID: 156
Motif name: rgyGCCMyCTksTGGccd
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 12
Number of overlap: 6
Similarity score: 0.026631

Alignment:
DDGCCASYAGMGGGCKVM
-DGCCAA-----------

Original motif     Consensus sequence: RVYGCCCYCTKSTGGCHD Reverse complement motif     Consensus sequence: DDGCCASYAGMGGGCKVM


Dataset #: 4
Motif ID: 151
Motif name: agrCCAGmAGrg
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.0273632

Alignment:
CKCTRCTGGCVH
-----TTGGCD-

Original motif     Consensus sequence: HVGCCAGMAGRG Reverse complement motif     Consensus sequence: CKCTRCTGGCVH


Dataset #: 1
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.0280507

Alignment:
SWGCCACC
-DGCCAA-

Original motif     Consensus sequence: GGTGGCWS Reverse complement motif     Consensus sequence: SWGCCACC


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 12
Number of overlap: 6
Similarity score: 0.0280858

Alignment:
KBKGCCCTCTYCTGGCCHV
-----------TTGGCD--

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV



Significant Motifs - Global and Local Matching (Highest to Lowest)

Dataset #: 3 Motif ID: 71 Motif name: Arnt

Original motif     Consensus sequence: CACGTG Reverse complement motif     Consensus sequence: CACGTG

Best Matches for Significant Motif ID 71 (Highest to Lowest)

Dataset #: 1
Motif ID: 20
Motif name: Motif 20
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0

Alignment:
MACGTG
CACGTG

Original motif     Consensus sequence: CACGTR Reverse complement motif     Consensus sequence: MACGTG


Dataset #: 3
Motif ID: 91
Motif name: MAX
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.00380329

Alignment:
BCACGTGDTD
-CACGTG---

Original motif     Consensus sequence: DAHCACGTGD Reverse complement motif     Consensus sequence: BCACGTGDTD


Dataset #: 3
Motif ID: 126
Motif name: USF1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.00445689

Alignment:
MCACGTG
-CACGTG

Original motif     Consensus sequence: CACGTGR Reverse complement motif     Consensus sequence: MCACGTG


Dataset #: 3
Motif ID: 95
Motif name: MYCMAX
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.00495292

Alignment:
RASCACGTGGT
---CACGTG--

Original motif     Consensus sequence: RASCACGTGGT Reverse complement motif     Consensus sequence: ACCACGTGSTM


Dataset #: 3
Motif ID: 94
Motif name: Myc
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.0173209

Alignment:
DCCACGTGCV
--CACGTG--

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV


Dataset #: 2 Motif ID: 46 Motif name: Motif 46

Original motif     Consensus sequence: AGRKGGCR Reverse complement motif     Consensus sequence: KGCCYKCT

Best Matches for Significant Motif ID 46 (Highest to Lowest)

Dataset #: 1
Motif ID: 1
Motif name: Motif 1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0

Alignment:
AGRKGGCR
AGRKGGCR

Original motif     Consensus sequence: AGRKGGCR Reverse complement motif     Consensus sequence: KGCCYKCT


Dataset #: 4
Motif ID: 147
Motif name: asCAGrkGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.00651548

Alignment:
ASCAGRGGGCRSB
---AGRKGGCR--

Original motif     Consensus sequence: ASCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCMCTGST


Dataset #: 4
Motif ID: 165
Motif name: wgGCCAshAGrGGGCrsy
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 9
Number of overlap: 8
Similarity score: 0.0102443

Alignment:
KBKGCCCKCTHGTGGCHH
--KGCCYKCT--------

Original motif     Consensus sequence: HDGCCACHAGRGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCKCTHGTGGCHH


Dataset #: 4
Motif ID: 166
Motif name: CasCAGrGGGCrsy
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 5
Number of overlap: 8
Similarity score: 0.0104954

Alignment:
BSKGCCCKCTGGTG
--KGCCYKCT----

Original motif     Consensus sequence: CACCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCKCTGGTG


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0165822

Alignment:
KBKGCCCTCTYCTGGCCHV
--KGCCYKCT---------

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 4 Motif ID: 133 Motif name: shAGrGGGCAgy

Original motif     Consensus sequence: SHAGRGGGCABH Reverse complement motif     Consensus sequence: DBTGCCCKCTDS

Best Matches for Significant Motif ID 133 (Highest to Lowest)

Dataset #: 4
Motif ID: 165
Motif name: wgGCCAshAGrGGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 7
Number of overlap: 12
Similarity score: 0.00159897

Alignment:
HDGCCACHAGRGGGCRBY
------SHAGRGGGCABH

Original motif     Consensus sequence: HDGCCACHAGRGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCKCTHGTGGCHH


Dataset #: 4
Motif ID: 143
Motif name: AgmAGAGGGCrscAGak
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 12
Similarity score: 0.00815796

Alignment:
AGMAGAGGGCASCAGAK
-SHAGRGGGCABH----

Original motif     Consensus sequence: AGMAGAGGGCASCAGAK Reverse complement motif     Consensus sequence: RTCTGSTGCCCTCTYCT


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 8
Number of overlap: 12
Similarity score: 0.0109424

Alignment:
VHGGCCAGMAGAGGGCRBY
-------SHAGRGGGCABH

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 4
Motif ID: 166
Motif name: CasCAGrGGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.0124424

Alignment:
CACCAGRGGGCRSB
--SHAGRGGGCABH

Original motif     Consensus sequence: CACCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCKCTGGTG


Dataset #: 4
Motif ID: 147
Motif name: asCAGrkGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 12
Similarity score: 0.0128393

Alignment:
ASCAGRGGGCRSB
-SHAGRGGGCABH

Original motif     Consensus sequence: ASCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCMCTGST


Dataset #: 1 Motif ID: 8 Motif name: Motif 8

Original motif     Consensus sequence: AAATAH Reverse complement motif     Consensus sequence: DTATTT

Best Matches for Significant Motif ID 8 (Highest to Lowest)

Dataset #: 4
Motif ID: 150
Motif name: waATwAAAATAww
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.00224204

Alignment:
DHATWAAAATAHD
------AAATAH-

Original motif     Consensus sequence: DHATWAAAATAHD Reverse complement motif     Consensus sequence: DHTATTTTWATHD


Dataset #: 4
Motif ID: 157
Motif name: wtATTTTTAww
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 6
Number of overlap: 6
Similarity score: 0.00556446

Alignment:
WWTAAAAATAD
-----AAATAH

Original motif     Consensus sequence: DTATTTTTAWW Reverse complement motif     Consensus sequence: WWTAAAAATAD


Dataset #: 2
Motif ID: 68
Motif name: Motif 68
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 6
Similarity score: 0.0128826

Alignment:
WAAWAAAWAWWWAA
----AAATAH----

Original motif     Consensus sequence: WAAWAAAWAWWWAA Reverse complement motif     Consensus sequence: TTWWWTWTTTWTTW


Dataset #: 2
Motif ID: 52
Motif name: Motif 52
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0.0167304

Alignment:
AAATAAAW
AAATAH--

Original motif     Consensus sequence: AAATAAAW Reverse complement motif     Consensus sequence: WTTTATTT


Dataset #: 3
Motif ID: 118
Motif name: SRF
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.0210491

Alignment:
GCCCATATATGG
----AAATAH--

Original motif     Consensus sequence: GCCCATATATGG Reverse complement motif     Consensus sequence: CCATATATGGGC


Dataset #: 4 Motif ID: 153 Motif name: scAGrkGGCGcy

Original motif     Consensus sequence: SHAGRGGGCGCB Reverse complement motif     Consensus sequence: VGCGCCCMCTDS

Best Matches for Significant Motif ID 153 (Highest to Lowest)

Dataset #: 4
Motif ID: 137
Motif name: rgCGCCmyCTgs
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0

Alignment:
VGCGCCCYCTDS
VGCGCCCMCTDS

Original motif     Consensus sequence: VGCGCCCYCTDS Reverse complement motif     Consensus sequence: SHAGKGGGCGCB


Dataset #: 4
Motif ID: 147
Motif name: asCAGrkGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 12
Similarity score: 0.0112071

Alignment:
ASCAGRGGGCRSB
-SHAGRGGGCGCB

Original motif     Consensus sequence: ASCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCMCTGST


Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 7
Number of overlap: 12
Similarity score: 0.0133899

Alignment:
BMSMGCCYMCTKSTGGMHM
-VGCGCCCMCTDS------

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 4
Motif ID: 165
Motif name: wgGCCAshAGrGGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.0146442

Alignment:
HDGCCACHAGRGGGCRBY
------SHAGRGGGCGCB

Original motif     Consensus sequence: HDGCCACHAGRGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCKCTHGTGGCHH


Dataset #: 4
Motif ID: 166
Motif name: CasCAGrGGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 12
Similarity score: 0.0200811

Alignment:
CACCAGRGGGCRSB
--SHAGRGGGCGCB

Original motif     Consensus sequence: CACCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCKCTGGTG


Dataset #: 1 Motif ID: 20 Motif name: Motif 20

Original motif     Consensus sequence: CACGTR Reverse complement motif     Consensus sequence: MACGTG

Best Matches for Significant Motif ID 20 (Highest to Lowest)

Dataset #: 3
Motif ID: 71
Motif name: Arnt
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0

Alignment:
CACGTG
CACGTR

Original motif     Consensus sequence: CACGTG Reverse complement motif     Consensus sequence: CACGTG


Dataset #: 3
Motif ID: 95
Motif name: MYCMAX
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 6
Similarity score: 0.0102183

Alignment:
RASCACGTGGT
---MACGTG--

Original motif     Consensus sequence: RASCACGTGGT Reverse complement motif     Consensus sequence: ACCACGTGSTM


Dataset #: 3
Motif ID: 91
Motif name: MAX
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.011152

Alignment:
DAHCACGTGD
---MACGTG-

Original motif     Consensus sequence: DAHCACGTGD Reverse complement motif     Consensus sequence: BCACGTGDTD


Dataset #: 3
Motif ID: 126
Motif name: USF1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.0131944

Alignment:
CACGTGR
MACGTG-

Original motif     Consensus sequence: CACGTGR Reverse complement motif     Consensus sequence: MCACGTG


Dataset #: 3
Motif ID: 94
Motif name: Myc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.0253396

Alignment:
DCCACGTGCV
--CACGTR--

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV


Dataset #: 1 Motif ID: 1 Motif name: Motif 1

Original motif     Consensus sequence: AGRKGGCR Reverse complement motif     Consensus sequence: KGCCYKCT

Best Matches for Significant Motif ID 1 (Highest to Lowest)

Dataset #: 2
Motif ID: 46
Motif name: Motif 46
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0

Alignment:
AGRKGGCR
AGRKGGCR

Original motif     Consensus sequence: AGRKGGCR Reverse complement motif     Consensus sequence: KGCCYKCT


Dataset #: 4
Motif ID: 147
Motif name: asCAGrkGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.00628523

Alignment:
ASCAGRGGGCRSB
---AGRKGGCR--

Original motif     Consensus sequence: ASCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCMCTGST


Dataset #: 4
Motif ID: 165
Motif name: wgGCCAshAGrGGGCrsy
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0102152

Alignment:
KBKGCCCKCTHGTGGCHH
--KGCCYKCT--------

Original motif     Consensus sequence: HDGCCACHAGRGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCKCTHGTGGCHH


Dataset #: 4
Motif ID: 166
Motif name: CasCAGrGGGCrsy
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0106761

Alignment:
BSKGCCCKCTGGTG
--KGCCYKCT----

Original motif     Consensus sequence: CACCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCKCTGGTG


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.016658

Alignment:
KBKGCCCTCTYCTGGCCHV
--KGCCYKCT---------

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 4
Motif ID: 164
Motif name: asyAGrkGGCRGCAga
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0201849

Alignment:
ASYAGRKGGCAGCABH
---AGRKGGCR-----

Original motif     Consensus sequence: ASYAGRKGGCAGCABH Reverse complement motif     Consensus sequence: HBTGCTGCCYMCTKST


Dataset #: 4 Motif ID: 136 Motif name: dwCAGAAGwh

Original motif     Consensus sequence: DHCAGAAGDH Reverse complement motif     Consensus sequence: HDCTTCTGHD

Best Matches for Significant Motif ID 136 (Highest to Lowest)

Dataset #: 4
Motif ID: 151
Motif name: agrCCAGmAGrg
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 10
Similarity score: 0.00562474

Alignment:
HVGCCAGMAGRG
--DHCAGAAGDH

Original motif     Consensus sequence: HVGCCAGMAGRG Reverse complement motif     Consensus sequence: CKCTRCTGGCVH


Dataset #: 4
Motif ID: 141
Motif name: raCAAAACam
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0107169

Alignment:
DACAAAACAH
DHCAGAAGDH

Original motif     Consensus sequence: DACAAAACAH Reverse complement motif     Consensus sequence: HTGTTTTGTD


Dataset #: 4
Motif ID: 158
Motif name: grCCACwAGrk
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0167426

Alignment:
DDCCACWAGRK
-DHCAGAAGDH

Original motif     Consensus sequence: DDCCACWAGRK Reverse complement motif     Consensus sequence: YMCTWGTGGHH


Dataset #: 4
Motif ID: 139
Motif name: mkCTyTTCsg
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0207259

Alignment:
HBCTTTTCBD
HDCTTCTGHD

Original motif     Consensus sequence: HBCTTTTCBD Reverse complement motif     Consensus sequence: HBGAAAAGBD


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 10
Similarity score: 0.0212719

Alignment:
VHGGCCAGMAGAGGGCRBY
---DHCAGAAGDH------

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 3 Motif ID: 127 Motif name: YY1

Original motif     Consensus sequence: RCCATB Reverse complement motif     Consensus sequence: BATGGM

Best Matches for Significant Motif ID 127 (Highest to Lowest)

Dataset #: 2
Motif ID: 61
Motif name: Motif 61
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.00122549

Alignment:
KCCATCT
-RCCATB

Original motif     Consensus sequence: AGATGGY Reverse complement motif     Consensus sequence: KCCATCT


Dataset #: 1
Motif ID: 12
Motif name: Motif 12
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.00857843

Alignment:
GAGCCATC
RCCATB--

Original motif     Consensus sequence: GATGGCTC Reverse complement motif     Consensus sequence: GAGCCATC


Dataset #: 4
Motif ID: 145
Motif name: grCCACyAGAkG
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.022036

Alignment:
CYTCTKGTGGHH
-----BATGGM-

Original motif     Consensus sequence: DDCCACYAGAKG Reverse complement motif     Consensus sequence: CYTCTKGTGGHH


Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.0220417

Alignment:
BMSMGCCYMCTKSTGGMHM
-----------BATGGM--

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 4
Motif ID: 138
Motif name: grCCACyAGAkG
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.0223679

Alignment:
DDCCACYAGAKG
-RCCATB-----

Original motif     Consensus sequence: DDCCACYAGAKG Reverse complement motif     Consensus sequence: CYTCTMGTGGHH


Dataset #: 3 Motif ID: 72 Motif name: ArntAhr

Original motif     Consensus sequence: YGCGTG Reverse complement motif     Consensus sequence: CACGCM

Best Matches for Significant Motif ID 72 (Highest to Lowest)

Dataset #: 3
Motif ID: 86
Motif name: HIF1AARNT
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0

Alignment:
VBACGTGV
-YGCGTG-

Original motif     Consensus sequence: VBACGTGV Reverse complement motif     Consensus sequence: VCACGTBV


Dataset #: 4
Motif ID: 134
Motif name: ssCGwGCGss
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 6
Similarity score: 0.0128947

Alignment:
BSCGWGCGBV
YGCGTG----

Original motif     Consensus sequence: BSCGWGCGBV Reverse complement motif     Consensus sequence: VBCGCWCGSB


Dataset #: 3
Motif ID: 71
Motif name: Arnt
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.0203526

Alignment:
CACGTG
YGCGTG

Original motif     Consensus sequence: CACGTG Reverse complement motif     Consensus sequence: CACGTG


Dataset #: 1
Motif ID: 20
Motif name: Motif 20
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0.0206428

Alignment:
MACGTG
YGCGTG

Original motif     Consensus sequence: CACGTR Reverse complement motif     Consensus sequence: MACGTG


Dataset #: 3
Motif ID: 126
Motif name: USF1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.0255609

Alignment:
MCACGTG
-YGCGTG

Original motif     Consensus sequence: CACGTGR Reverse complement motif     Consensus sequence: MCACGTG



Best Matches for Each Motif (Highest to Lowest)

Dataset #: 1 Motif ID: 1 Motif name: Motif 1

Original motif     Consensus sequence: AGRKGGCR Reverse complement motif     Consensus sequence: KGCCYKCT

Best Matches for Motif ID 1 (Highest to Lowest)

Dataset #: 2
Motif ID: 46
Motif name: Motif 46
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0

Alignment:
AGRKGGCR
AGRKGGCR

Original motif     Consensus sequence: AGRKGGCR Reverse complement motif     Consensus sequence: KGCCYKCT


Dataset #: 4
Motif ID: 147
Motif name: asCAGrkGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.00628523

Alignment:
ASCAGRGGGCRSB
---AGRKGGCR--

Original motif     Consensus sequence: ASCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCMCTGST


Dataset #: 4
Motif ID: 165
Motif name: wgGCCAshAGrGGGCrsy
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0102152

Alignment:
KBKGCCCKCTHGTGGCHH
--KGCCYKCT--------

Original motif     Consensus sequence: HDGCCACHAGRGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCKCTHGTGGCHH


Dataset #: 4
Motif ID: 166
Motif name: CasCAGrGGGCrsy
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0106761

Alignment:
BSKGCCCKCTGGTG
--KGCCYKCT----

Original motif     Consensus sequence: CACCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCKCTGGTG


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.016658

Alignment:
KBKGCCCTCTYCTGGCCHV
--KGCCYKCT---------

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 4
Motif ID: 164
Motif name: asyAGrkGGCRGCAga
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0201849

Alignment:
ASYAGRKGGCAGCABH
---AGRKGGCR-----

Original motif     Consensus sequence: ASYAGRKGGCAGCABH Reverse complement motif     Consensus sequence: HBTGCTGCCYMCTKST


Dataset #: 1 Motif ID: 2 Motif name: Motif 2

Original motif     Consensus sequence: AAAAHAAA Reverse complement motif     Consensus sequence: TTTDTTTT

Best Matches for Motif ID 2 (Highest to Lowest)

Dataset #: 2
Motif ID: 68
Motif name: Motif 68
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.034263

Alignment:
WAAWAAAWAWWWAA
---AAAAHAAA---

Original motif     Consensus sequence: WAAWAAAWAWWWAA Reverse complement motif     Consensus sequence: TTWWWTWTTTWTTW


Dataset #: 4
Motif ID: 150
Motif name: waATwAAAATAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 6
Number of overlap: 8
Similarity score: 0.061025

Alignment:
DHTATTTTWATHD
TTTDTTTT-----

Original motif     Consensus sequence: DHATWAAAATAHD Reverse complement motif     Consensus sequence: DHTATTTTWATHD


Dataset #: 2
Motif ID: 52
Motif name: Motif 52
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0613251

Alignment:
AAATAAAW
AAAAHAAA

Original motif     Consensus sequence: AAATAAAW Reverse complement motif     Consensus sequence: WTTTATTT


Dataset #: 4
Motif ID: 157
Motif name: wtATTTTTAww
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0669479

Alignment:
WWTAAAAATAD
AAAAHAAA---

Original motif     Consensus sequence: DTATTTTTAWW Reverse complement motif     Consensus sequence: WWTAAAAATAD


Dataset #: 4
Motif ID: 148
Motif name: wwTwAAAAww
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0808845

Alignment:
DDTWAAAAHH
AAAAHAAA--

Original motif     Consensus sequence: DDTWAAAAHH Reverse complement motif     Consensus sequence: HHTTTTWADD


Dataset #: 1 Motif ID: 3 Motif name: Motif 3

Original motif     Consensus sequence: CACACACA Reverse complement motif     Consensus sequence: TGTGTGTG

Best Matches for Motif ID 3 (Highest to Lowest)

Dataset #: 1
Motif ID: 24
Motif name: Motif 24
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0443933

Alignment:
TGTGGGTG
TGTGTGTG

Original motif     Consensus sequence: TGTGGGTG Reverse complement motif     Consensus sequence: CACCCACA


Dataset #: 1
Motif ID: 31
Motif name: Motif 31
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0599548

Alignment:
CATGYACA
CACACACA

Original motif     Consensus sequence: CATGYACA Reverse complement motif     Consensus sequence: TGTKCATG


Dataset #: 3
Motif ID: 120
Motif name: T
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.065511

Alignment:
TTCACACCTAG
--CACACACA-

Original motif     Consensus sequence: CTAGGTGTGAA Reverse complement motif     Consensus sequence: TTCACACCTAG


Dataset #: 2
Motif ID: 64
Motif name: Motif 64
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0681512

Alignment:
CATATRCA
CACACACA

Original motif     Consensus sequence: CATATRCA Reverse complement motif     Consensus sequence: TGMATATG


Dataset #: 3
Motif ID: 114
Motif name: RUNX1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0795385

Alignment:
BBYTGTGGTTT
---TGTGTGTG

Original motif     Consensus sequence: BBYTGTGGTTT Reverse complement motif     Consensus sequence: AAACCACAKVB


Dataset #: 1 Motif ID: 4 Motif name: Motif 4

Original motif     Consensus sequence: TTTWWAW Reverse complement motif     Consensus sequence: WTWWAAA

Best Matches for Motif ID 4 (Highest to Lowest)

Dataset #: 4
Motif ID: 148
Motif name: wwTwAAAAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 7
Similarity score: 0.0204013

Alignment:
DDTWAAAAHH
-WTWWAAA--

Original motif     Consensus sequence: DDTWAAAAHH Reverse complement motif     Consensus sequence: HHTTTTWADD


Dataset #: 4
Motif ID: 150
Motif name: waATwAAAATAww
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 7
Similarity score: 0.0245609

Alignment:
DHTATTTTWATHD
----TTTWWAW--

Original motif     Consensus sequence: DHATWAAAATAHD Reverse complement motif     Consensus sequence: DHTATTTTWATHD


Dataset #: 4
Motif ID: 157
Motif name: wtATTTTTAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 7
Similarity score: 0.028753

Alignment:
WWTAAAAATAD
-WTWWAAA---

Original motif     Consensus sequence: DTATTTTTAWW Reverse complement motif     Consensus sequence: WWTAAAAATAD


Dataset #: 2
Motif ID: 68
Motif name: Motif 68
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 7
Similarity score: 0.048084

Alignment:
WAAWAAAWAWWWAA
WTWWAAA-------

Original motif     Consensus sequence: WAAWAAAWAWWWAA Reverse complement motif     Consensus sequence: TTWWWTWTTTWTTW


Dataset #: 2
Motif ID: 52
Motif name: Motif 52
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 7
Similarity score: 0.0637767

Alignment:
AAATAAAW
WTWWAAA-

Original motif     Consensus sequence: AAATAAAW Reverse complement motif     Consensus sequence: WTTTATTT


Dataset #: 1 Motif ID: 5 Motif name: Motif 5

Original motif     Consensus sequence: CCCCDCCC Reverse complement motif     Consensus sequence: GGGDGGGG

Best Matches for Motif ID 5 (Highest to Lowest)

Dataset #: 2
Motif ID: 59
Motif name: Motif 59
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.00363191

Alignment:
CCCCRCCC
CCCCDCCC

Original motif     Consensus sequence: CCCCRCCC Reverse complement motif     Consensus sequence: GGGKGGGG


Dataset #: 4
Motif ID: 155
Motif name: csCSCCdCCCcs
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.00464015

Alignment:
VBCCCCDCCCHV
--CCCCDCCC--

Original motif     Consensus sequence: VBCCCCDCCCHV Reverse complement motif     Consensus sequence: VDGGGDGGGGBV


Dataset #: 3
Motif ID: 89
Motif name: Klf4
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0352587

Alignment:
GCCYCMCCCD
-CCCCDCCC-

Original motif     Consensus sequence: DGGGYGKGGC Reverse complement motif     Consensus sequence: GCCYCMCCCD


Dataset #: 4
Motif ID: 154
Motif name: csCsCCTCCcc
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0361349

Alignment:
BDGGAGGGGBV
-GGGDGGGG--

Original motif     Consensus sequence: VBCCCCTCCHB Reverse complement motif     Consensus sequence: BDGGAGGGGBV


Dataset #: 3
Motif ID: 116
Motif name: SP1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0368066

Alignment:
CCCCKCCCCC
CCCCDCCC--

Original motif     Consensus sequence: CCCCKCCCCC Reverse complement motif     Consensus sequence: GGGGGYGGGG


Dataset #: 1 Motif ID: 6 Motif name: Motif 6

Original motif     Consensus sequence: CTGGRRA Reverse complement motif     Consensus sequence: TMMCCAG

Best Matches for Motif ID 6 (Highest to Lowest)

Dataset #: 1
Motif ID: 40
Motif name: Motif 40
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 7
Similarity score: 0.0326828

Alignment:
CTGGGAMT
CTGGRRA-

Original motif     Consensus sequence: ARTCCCAG Reverse complement motif     Consensus sequence: CTGGGAMT


Dataset #: 2
Motif ID: 69
Motif name: Motif 69
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 7
Number of overlap: 7
Similarity score: 0.0472643

Alignment:
CCTGGARCTGGAGT
-CTGGRRA------

Original motif     Consensus sequence: CCTGGARCTGGAGT Reverse complement motif     Consensus sequence: ACTCCAGMTCCAGG


Dataset #: 3
Motif ID: 85
Motif name: Hand1Tcfe2a
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 7
Similarity score: 0.0513687

Alignment:
BRTCTGGMWT
---CTGGRRA

Original motif     Consensus sequence: BRTCTGGMWT Reverse complement motif     Consensus sequence: AWRCCAGAMB


Dataset #: 4
Motif ID: 151
Motif name: agrCCAGmAGrg
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 6
Number of overlap: 7
Similarity score: 0.0514331

Alignment:
HVGCCAGMAGRG
TMMCCAG-----

Original motif     Consensus sequence: HVGCCAGMAGRG Reverse complement motif     Consensus sequence: CKCTRCTGGCVH


Dataset #: 1
Motif ID: 33
Motif name: Motif 33
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 7
Similarity score: 0.0553656

Alignment:
GWAGCCAG
-TMMCCAG

Original motif     Consensus sequence: CTGGCTWC Reverse complement motif     Consensus sequence: GWAGCCAG


Dataset #: 1 Motif ID: 7 Motif name: Motif 7

Original motif     Consensus sequence: AGRAAA Reverse complement motif     Consensus sequence: TTTMCT

Best Matches for Motif ID 7 (Highest to Lowest)

Dataset #: 1
Motif ID: 2
Motif name: Motif 2
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0.0617932

Alignment:
TTTDTTTT
TTTMCT--

Original motif     Consensus sequence: AAAAHAAA Reverse complement motif     Consensus sequence: TTTDTTTT


Dataset #: 2
Motif ID: 52
Motif name: Motif 52
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.0627423

Alignment:
WTTTATTT
-TTTMCT-

Original motif     Consensus sequence: AAATAAAW Reverse complement motif     Consensus sequence: WTTTATTT


Dataset #: 2
Motif ID: 68
Motif name: Motif 68
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.0627423

Alignment:
WAAWAAAWAWWWAA
-AGRAAA-------

Original motif     Consensus sequence: WAAWAAAWAWWWAA Reverse complement motif     Consensus sequence: TTWWWTWTTTWTTW


Dataset #: 1
Motif ID: 32
Motif name: Motif 32
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0.0627423

Alignment:
TTTATTY
TTTMCT-

Original motif     Consensus sequence: KAATAAA Reverse complement motif     Consensus sequence: TTTATTY


Dataset #: 3
Motif ID: 119
Motif name: Stat3
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.069443

Alignment:
TTCCAGGAAG
----AGRAAA

Original motif     Consensus sequence: TTCCAGGAAG Reverse complement motif     Consensus sequence: CTTCCTGGAA


Dataset #: 1 Motif ID: 8 Motif name: Motif 8

Original motif     Consensus sequence: AAATAH Reverse complement motif     Consensus sequence: DTATTT

Best Matches for Motif ID 8 (Highest to Lowest)

Dataset #: 4
Motif ID: 150
Motif name: waATwAAAATAww
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.00224204

Alignment:
DHATWAAAATAHD
------AAATAH-

Original motif     Consensus sequence: DHATWAAAATAHD Reverse complement motif     Consensus sequence: DHTATTTTWATHD


Dataset #: 4
Motif ID: 157
Motif name: wtATTTTTAww
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 6
Number of overlap: 6
Similarity score: 0.00556446

Alignment:
WWTAAAAATAD
-----AAATAH

Original motif     Consensus sequence: DTATTTTTAWW Reverse complement motif     Consensus sequence: WWTAAAAATAD


Dataset #: 2
Motif ID: 68
Motif name: Motif 68
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 6
Similarity score: 0.0128826

Alignment:
WAAWAAAWAWWWAA
----AAATAH----

Original motif     Consensus sequence: WAAWAAAWAWWWAA Reverse complement motif     Consensus sequence: TTWWWTWTTTWTTW


Dataset #: 2
Motif ID: 52
Motif name: Motif 52
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0.0167304

Alignment:
AAATAAAW
AAATAH--

Original motif     Consensus sequence: AAATAAAW Reverse complement motif     Consensus sequence: WTTTATTT


Dataset #: 3
Motif ID: 118
Motif name: SRF
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.0210491

Alignment:
GCCCATATATGG
----AAATAH--

Original motif     Consensus sequence: GCCCATATATGG Reverse complement motif     Consensus sequence: CCATATATGGGC


Dataset #: 1 Motif ID: 9 Motif name: Motif 9

Original motif     Consensus sequence: GGTGGCWS Reverse complement motif     Consensus sequence: SWGCCACC

Best Matches for Motif ID 9 (Highest to Lowest)

Dataset #: 4
Motif ID: 144
Motif name: ctCTrsyGCCmCCTast
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.0240374

Alignment:
ASTAGGYGGCMSCAGDD
----GGTGGCWS-----

Original motif     Consensus sequence: HDCTGSYGCCMCCTAST Reverse complement motif     Consensus sequence: ASTAGGYGGCMSCAGDD


Dataset #: 4
Motif ID: 146
Motif name: myrGYGCCmCCTast
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.0280157

Alignment:
ASTAGGYGGCGCTBB
----GGTGGCWS---

Original motif     Consensus sequence: VBAGCGCCMCCTAST Reverse complement motif     Consensus sequence: ASTAGGYGGCGCTBB


Dataset #: 4
Motif ID: 164
Motif name: asyAGrkGGCRGCAga
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 8
Similarity score: 0.0360935

Alignment:
ASYAGRKGGCAGCABH
----GGTGGCWS----

Original motif     Consensus sequence: ASYAGRKGGCAGCABH Reverse complement motif     Consensus sequence: HBTGCTGCCYMCTKST


Dataset #: 4
Motif ID: 147
Motif name: asCAGrkGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.0392839

Alignment:
ASCAGRGGGCRSB
----GGTGGCWS-

Original motif     Consensus sequence: ASCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCMCTGST


Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 10
Number of overlap: 8
Similarity score: 0.0429881

Alignment:
YDRCCASYAGRKGGCRSYV
---------GGTGGCWS--

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 1 Motif ID: 10 Motif name: Motif 10

Original motif     Consensus sequence: CTGGCCTC Reverse complement motif     Consensus sequence: GAGGCCAG

Best Matches for Motif ID 10 (Highest to Lowest)

Dataset #: 2
Motif ID: 49
Motif name: Motif 49
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0

Alignment:
GAGGCCAG
GAGGCCAG

Original motif     Consensus sequence: CTGGCCTC Reverse complement motif     Consensus sequence: GAGGCCAG


Dataset #: 1
Motif ID: 33
Motif name: Motif 33
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0326888

Alignment:
CTGGCTWC
CTGGCCTC

Original motif     Consensus sequence: CTGGCTWC Reverse complement motif     Consensus sequence: GWAGCCAG


Dataset #: 4
Motif ID: 143
Motif name: AgmAGAGGGCrscAGak
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.047812

Alignment:
AGMAGAGGGCASCAGAK
----GAGGCCAG-----

Original motif     Consensus sequence: AGMAGAGGGCASCAGAK Reverse complement motif     Consensus sequence: RTCTGSTGCCCTCTYCT


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0506629

Alignment:
VHGGCCAGMAGAGGGCRBY
GAGGCCAG-----------

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 4
Motif ID: 133
Motif name: shAGrGGGCAgy
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0509007

Alignment:
DBTGCCCKCTDS
-CTGGCCTC---

Original motif     Consensus sequence: SHAGRGGGCABH Reverse complement motif     Consensus sequence: DBTGCCCKCTDS


Dataset #: 1 Motif ID: 11 Motif name: Motif 11

Original motif     Consensus sequence: CTBCCTCY Reverse complement motif     Consensus sequence: MGAGGBAG

Best Matches for Motif ID 11 (Highest to Lowest)

Dataset #: 2
Motif ID: 63
Motif name: Motif 63
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0297241

Alignment:
CWCCCTCT
CTBCCTCY

Original motif     Consensus sequence: AGAGGGWG Reverse complement motif     Consensus sequence: CWCCCTCT


Dataset #: 1
Motif ID: 17
Motif name: Motif 17
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0448422

Alignment:
CCDCCTCC
CTBCCTCY

Original motif     Consensus sequence: CCDCCTCC Reverse complement motif     Consensus sequence: GGAGGDGG


Dataset #: 4
Motif ID: 169
Motif name: yvTGCyGCCmCCwGgtG
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.0620322

Alignment:
BVTGCTGCCACCWGGDG
----CTBCCTCY-----

Original motif     Consensus sequence: BVTGCTGCCACCWGGDG Reverse complement motif     Consensus sequence: CDCCWGGTGGCAGCAVV


Dataset #: 4
Motif ID: 164
Motif name: asyAGrkGGCRGCAga
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.0623054

Alignment:
HBTGCTGCCYMCTKST
----CTBCCTCY----

Original motif     Consensus sequence: ASYAGRKGGCAGCABH Reverse complement motif     Consensus sequence: HBTGCTGCCYMCTKST


Dataset #: 4
Motif ID: 154
Motif name: csCsCCTCCcc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.067516

Alignment:
VBCCCCTCCHB
-CTBCCTCY--

Original motif     Consensus sequence: VBCCCCTCCHB Reverse complement motif     Consensus sequence: BDGGAGGGGBV


Dataset #: 1 Motif ID: 12 Motif name: Motif 12

Original motif     Consensus sequence: GATGGCTC Reverse complement motif     Consensus sequence: GAGCCATC

Best Matches for Motif ID 12 (Highest to Lowest)

Dataset #: 1
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0446318

Alignment:
GGTGGCWS
GATGGCTC

Original motif     Consensus sequence: GGTGGCWS Reverse complement motif     Consensus sequence: SWGCCACC


Dataset #: 4
Motif ID: 149
Motif name: asmAGRGGGCrCTGsmkc
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 5
Number of overlap: 8
Similarity score: 0.053856

Alignment:
DBTSCAGMGCCCTCTRST
------GAGCCATC----

Original motif     Consensus sequence: ASMAGAGGGCRCTGSABH Reverse complement motif     Consensus sequence: DBTSCAGMGCCCTCTRST


Dataset #: 4
Motif ID: 146
Motif name: myrGYGCCmCCTast
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.0558657

Alignment:
ASTAGGYGGCGCTBB
----GATGGCTC---

Original motif     Consensus sequence: VBAGCGCCMCCTAST Reverse complement motif     Consensus sequence: ASTAGGYGGCGCTBB


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 11
Number of overlap: 8
Similarity score: 0.0592323

Alignment:
VHGGCCAGMAGAGGGCRBY
----------GATGGCTC-

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 4
Motif ID: 165
Motif name: wgGCCAshAGrGGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0607886

Alignment:
HDGCCACHAGRGGGCRBY
---------GATGGCTC-

Original motif     Consensus sequence: HDGCCACHAGRGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCKCTHGTGGCHH


Dataset #: 1 Motif ID: 13 Motif name: Motif 13

Original motif     Consensus sequence: CAGYDCC Reverse complement motif     Consensus sequence: GGDKCTG

Best Matches for Motif ID 13 (Highest to Lowest)

Dataset #: 2
Motif ID: 47
Motif name: Motif 47
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 7
Similarity score: 0

Alignment:
CAGYDCC
CAGYDCC

Original motif     Consensus sequence: CAGYDCC Reverse complement motif     Consensus sequence: GGDKCTG


Dataset #: 2
Motif ID: 53
Motif name: Motif 53
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 7
Similarity score: 0.0294104

Alignment:
GGGATCTG
-GGDKCTG

Original motif     Consensus sequence: CAGATCCC Reverse complement motif     Consensus sequence: GGGATCTG


Dataset #: 3
Motif ID: 113
Motif name: REST
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 13
Number of overlap: 7
Similarity score: 0.0500473

Alignment:
TTCAGCACCATGGACAGCKCC
--CAGYDCC------------

Original motif     Consensus sequence: TTCAGCACCATGGACAGCKCC Reverse complement motif     Consensus sequence: GGYGCTGTCCATGGTGCTGAA


Dataset #: 1
Motif ID: 22
Motif name: Motif 22
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 7
Similarity score: 0.0533516

Alignment:
GGKATCTG
-GGDKCTG

Original motif     Consensus sequence: CAGATYCC Reverse complement motif     Consensus sequence: GGKATCTG


Dataset #: 4
Motif ID: 149
Motif name: asmAGRGGGCrCTGsmkc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 8
Number of overlap: 7
Similarity score: 0.0558573

Alignment:
DBTSCAGMGCCCTCTRST
----CAGYDCC-------

Original motif     Consensus sequence: ASMAGAGGGCRCTGSABH Reverse complement motif     Consensus sequence: DBTSCAGMGCCCTCTRST


Dataset #: 1 Motif ID: 14 Motif name: Motif 14

Original motif     Consensus sequence: TSTGTR Reverse complement motif     Consensus sequence: MACASA

Best Matches for Motif ID 14 (Highest to Lowest)

Dataset #: 2
Motif ID: 57
Motif name: Motif 57
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.0165773

Alignment:
KTGTGTGT
-TSTGTR-

Original motif     Consensus sequence: ACACACAY Reverse complement motif     Consensus sequence: KTGTGTGT


Dataset #: 1
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.0165773

Alignment:
CACACACA
MACASA--

Original motif     Consensus sequence: CACACACA Reverse complement motif     Consensus sequence: TGTGTGTG


Dataset #: 4
Motif ID: 136
Motif name: dwCAGAAGwh
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.0401476

Alignment:
HDCTTCTGHD
----TSTGTR

Original motif     Consensus sequence: DHCAGAAGDH Reverse complement motif     Consensus sequence: HDCTTCTGHD


Dataset #: 3
Motif ID: 114
Motif name: RUNX1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.0445836

Alignment:
BBYTGTGGTTT
-TSTGTR----

Original motif     Consensus sequence: BBYTGTGGTTT Reverse complement motif     Consensus sequence: AAACCACAKVB


Dataset #: 1
Motif ID: 24
Motif name: Motif 24
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.0456841

Alignment:
TGTGGGTG
--TSTGTR

Original motif     Consensus sequence: TGTGGGTG Reverse complement motif     Consensus sequence: CACCCACA


Dataset #: 1 Motif ID: 15 Motif name: Motif 15

Original motif     Consensus sequence: GCTCTTAA Reverse complement motif     Consensus sequence: TTAAGAGC

Best Matches for Motif ID 15 (Highest to Lowest)

Dataset #: 4
Motif ID: 159
Motif name: kkAAGAGCAsy
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0216416

Alignment:
DBAAGAGCAVH
TTAAGAGC---

Original motif     Consensus sequence: DBAAGAGCAVH Reverse complement motif     Consensus sequence: HVTGCTCTTBH


Dataset #: 2
Motif ID: 55
Motif name: Motif 55
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0390835

Alignment:
GCTCACAA
GCTCTTAA

Original motif     Consensus sequence: GCTCACAA Reverse complement motif     Consensus sequence: TTGTGAGC


Dataset #: 4
Motif ID: 148
Motif name: wwTwAAAAww
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0584188

Alignment:
HHTTTTWADD
GCTCTTAA--

Original motif     Consensus sequence: DDTWAAAAHH Reverse complement motif     Consensus sequence: HHTTTTWADD


Dataset #: 3
Motif ID: 120
Motif name: T
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0666592

Alignment:
CTAGGTGTGAA
---GCTCTTAA

Original motif     Consensus sequence: CTAGGTGTGAA Reverse complement motif     Consensus sequence: TTCACACCTAG


Dataset #: 3
Motif ID: 118
Motif name: SRF
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.0676161

Alignment:
CCATATATGGGC
----TTAAGAGC

Original motif     Consensus sequence: GCCCATATATGG Reverse complement motif     Consensus sequence: CCATATATGGGC


Dataset #: 1 Motif ID: 16 Motif name: Motif 16

Original motif     Consensus sequence: GGAAGRR Reverse complement motif     Consensus sequence: MMCTTCC

Best Matches for Motif ID 16 (Highest to Lowest)

Dataset #: 3
Motif ID: 84
Motif name: GABPA
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 7
Similarity score: 0.0238137

Alignment:
VVCACTTCCGG
--MMCTTCC--

Original motif     Consensus sequence: CCGGAAGTGVV Reverse complement motif     Consensus sequence: VVCACTTCCGG


Dataset #: 1
Motif ID: 17
Motif name: Motif 17
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 7
Similarity score: 0.0632856

Alignment:
GGAGGDGG
GGAAGRR-

Original motif     Consensus sequence: CCDCCTCC Reverse complement motif     Consensus sequence: GGAGGDGG


Dataset #: 4
Motif ID: 136
Motif name: dwCAGAAGwh
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 7
Similarity score: 0.0705782

Alignment:
HDCTTCTGHD
MMCTTCC---

Original motif     Consensus sequence: DHCAGAAGDH Reverse complement motif     Consensus sequence: HDCTTCTGHD


Dataset #: 3
Motif ID: 112
Motif name: RELA
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 7
Similarity score: 0.0712379

Alignment:
GGGRATTTCC
---MMCTTCC

Original motif     Consensus sequence: GGGRATTTCC Reverse complement motif     Consensus sequence: GGAAATKCCC


Dataset #: 4
Motif ID: 154
Motif name: csCsCCTCCcc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 7
Similarity score: 0.0768131

Alignment:
BDGGAGGGGBV
--GGAAGRR--

Original motif     Consensus sequence: VBCCCCTCCHB Reverse complement motif     Consensus sequence: BDGGAGGGGBV


Dataset #: 1 Motif ID: 17 Motif name: Motif 17

Original motif     Consensus sequence: CCDCCTCC Reverse complement motif     Consensus sequence: GGAGGDGG

Best Matches for Motif ID 17 (Highest to Lowest)

Dataset #: 4
Motif ID: 154
Motif name: csCsCCTCCcc
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0325807

Alignment:
BDGGAGGGGBV
--GGAGGDGG-

Original motif     Consensus sequence: VBCCCCTCCHB Reverse complement motif     Consensus sequence: BDGGAGGGGBV


Dataset #: 1
Motif ID: 11
Motif name: Motif 11
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0441606

Alignment:
CTBCCTCY
CCDCCTCC

Original motif     Consensus sequence: CTBCCTCY Reverse complement motif     Consensus sequence: MGAGGBAG


Dataset #: 4
Motif ID: 155
Motif name: csCSCCdCCCcs
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0485525

Alignment:
VDGGGDGGGGBV
---GGAGGDGG-

Original motif     Consensus sequence: VBCCCCDCCCHV Reverse complement motif     Consensus sequence: VDGGGDGGGGBV


Dataset #: 1
Motif ID: 27
Motif name: Motif 27
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0499486

Alignment:
CSGCCGCC
CCDCCTCC

Original motif     Consensus sequence: CSGCCGCC Reverse complement motif     Consensus sequence: GGCGGCSG


Dataset #: 3
Motif ID: 116
Motif name: SP1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0500496

Alignment:
CCCCKCCCCC
--CCDCCTCC

Original motif     Consensus sequence: CCCCKCCCCC Reverse complement motif     Consensus sequence: GGGGGYGGGG


Dataset #: 1 Motif ID: 18 Motif name: Motif 18

Original motif     Consensus sequence: CATGYATG Reverse complement motif     Consensus sequence: CATKCATG

Best Matches for Motif ID 18 (Highest to Lowest)

Dataset #: 4
Motif ID: 152
Motif name: yrCATGCAyr
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.058327

Alignment:
BRCATGCABD
--CATKCATG

Original motif     Consensus sequence: BRCATGCABD Reverse complement motif     Consensus sequence: HVTGCATGKV


Dataset #: 1
Motif ID: 31
Motif name: Motif 31
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0666244

Alignment:
CATGYACA
CATGYATG

Original motif     Consensus sequence: CATGYACA Reverse complement motif     Consensus sequence: TGTKCATG


Dataset #: 3
Motif ID: 125
Motif name: TP53
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 8
Number of overlap: 8
Similarity score: 0.068413

Alignment:
ACATGCCCGGKCATGTCCSR
-------CATKCATG-----

Original motif     Consensus sequence: MSGGACATGYCCGGGCATGT Reverse complement motif     Consensus sequence: ACATGCCCGGKCATGTCCSR


Dataset #: 3
Motif ID: 118
Motif name: SRF
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0745698

Alignment:
CCATATATGGGC
-CATGYATG---

Original motif     Consensus sequence: GCCCATATATGG Reverse complement motif     Consensus sequence: CCATATATGGGC


Dataset #: 3
Motif ID: 131
Motif name: znf143
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.105729

Alignment:
BAHYTCCCAKMATGCMWYGC
----------CATKCATG--

Original motif     Consensus sequence: BAHYTCCCAKMATGCMWYGC Reverse complement motif     Consensus sequence: GCMWRGCATYRTGGGAMHTB


Dataset #: 1 Motif ID: 19 Motif name: Motif 19

Original motif     Consensus sequence: CAGSCAG Reverse complement motif     Consensus sequence: CTGSCTG

Best Matches for Motif ID 19 (Highest to Lowest)

Dataset #: 1
Motif ID: 33
Motif name: Motif 33
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 7
Similarity score: 0.0196488

Alignment:
CTGGCTWC
CTGSCTG-

Original motif     Consensus sequence: CTGGCTWC Reverse complement motif     Consensus sequence: GWAGCCAG


Dataset #: 1
Motif ID: 28
Motif name: Motif 28
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 7
Similarity score: 0.0338273

Alignment:
CTTCCTG
CTGSCTG

Original motif     Consensus sequence: CTTCCTG Reverse complement motif     Consensus sequence: CAGGAAG


Dataset #: 1
Motif ID: 11
Motif name: Motif 11
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 7
Similarity score: 0.0430055

Alignment:
MGAGGBAG
CAGSCAG-

Original motif     Consensus sequence: CTBCCTCY Reverse complement motif     Consensus sequence: MGAGGBAG


Dataset #: 1
Motif ID: 10
Motif name: Motif 10
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 7
Similarity score: 0.0473229

Alignment:
CTGGCCTC
-CTGSCTG

Original motif     Consensus sequence: CTGGCCTC Reverse complement motif     Consensus sequence: GAGGCCAG


Dataset #: 1
Motif ID: 25
Motif name: Motif 25
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 7
Similarity score: 0.0479304

Alignment:
CTGRGTTC
CTGSCTG-

Original motif     Consensus sequence: CTGRGTTC Reverse complement motif     Consensus sequence: GAACKCAG


Dataset #: 1 Motif ID: 20 Motif name: Motif 20

Original motif     Consensus sequence: CACGTR Reverse complement motif     Consensus sequence: MACGTG

Best Matches for Motif ID 20 (Highest to Lowest)

Dataset #: 3
Motif ID: 71
Motif name: Arnt
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0

Alignment:
CACGTG
CACGTR

Original motif     Consensus sequence: CACGTG Reverse complement motif     Consensus sequence: CACGTG


Dataset #: 3
Motif ID: 95
Motif name: MYCMAX
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 6
Similarity score: 0.0102183

Alignment:
RASCACGTGGT
---MACGTG--

Original motif     Consensus sequence: RASCACGTGGT Reverse complement motif     Consensus sequence: ACCACGTGSTM


Dataset #: 3
Motif ID: 91
Motif name: MAX
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.011152

Alignment:
DAHCACGTGD
---MACGTG-

Original motif     Consensus sequence: DAHCACGTGD Reverse complement motif     Consensus sequence: BCACGTGDTD


Dataset #: 3
Motif ID: 126
Motif name: USF1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.0131944

Alignment:
CACGTGR
MACGTG-

Original motif     Consensus sequence: CACGTGR Reverse complement motif     Consensus sequence: MCACGTG


Dataset #: 3
Motif ID: 94
Motif name: Myc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.0253396

Alignment:
DCCACGTGCV
--CACGTR--

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV


Dataset #: 1 Motif ID: 21 Motif name: Motif 21

Original motif     Consensus sequence: CCACYAGG Reverse complement motif     Consensus sequence: CCTKGTGG

Best Matches for Motif ID 21 (Highest to Lowest)

Dataset #: 2
Motif ID: 48
Motif name: Motif 48
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.00903109

Alignment:
CCACYAGR
CCACYAGG

Original motif     Consensus sequence: CCACYAGR Reverse complement motif     Consensus sequence: MCTKGTGG


Dataset #: 4
Motif ID: 145
Motif name: grCCACyAGAkG
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.028408

Alignment:
CYTCTKGTGGHH
--CCTKGTGG--

Original motif     Consensus sequence: DDCCACYAGAKG Reverse complement motif     Consensus sequence: CYTCTKGTGGHH


Dataset #: 4
Motif ID: 158
Motif name: grCCACwAGrk
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0314791

Alignment:
DDCCACWAGRK
--CCACYAGG-

Original motif     Consensus sequence: DDCCACWAGRK Reverse complement motif     Consensus sequence: YMCTWGTGGHH


Dataset #: 4
Motif ID: 138
Motif name: grCCACyAGAkG
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0373754

Alignment:
DDCCACYAGAKG
--CCACYAGG--

Original motif     Consensus sequence: DDCCACYAGAKG Reverse complement motif     Consensus sequence: CYTCTMGTGGHH


Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 9
Number of overlap: 8
Similarity score: 0.0387762

Alignment:
BMSMGCCYMCTKSTGGMHM
--------CCTKGTGG---

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 1 Motif ID: 22 Motif name: Motif 22

Original motif     Consensus sequence: CAGATYCC Reverse complement motif     Consensus sequence: GGKATCTG

Best Matches for Motif ID 22 (Highest to Lowest)

Dataset #: 2
Motif ID: 53
Motif name: Motif 53
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0

Alignment:
GGGATCTG
GGKATCTG

Original motif     Consensus sequence: CAGATCCC Reverse complement motif     Consensus sequence: GGGATCTG


Dataset #: 2
Motif ID: 69
Motif name: Motif 69
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.060058

Alignment:
ACTCCAGMTCCAGG
----CAGATYCC--

Original motif     Consensus sequence: CCTGGARCTGGAGT Reverse complement motif     Consensus sequence: ACTCCAGMTCCAGG


Dataset #: 4
Motif ID: 149
Motif name: asmAGRGGGCrCTGsmkc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 7
Number of overlap: 8
Similarity score: 0.0603056

Alignment:
DBTSCAGMGCCCTCTRST
----CAGATYCC------

Original motif     Consensus sequence: ASMAGAGGGCRCTGSABH Reverse complement motif     Consensus sequence: DBTSCAGMGCCCTCTRST


Dataset #: 2
Motif ID: 64
Motif name: Motif 64
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0721296

Alignment:
CATATRCA
CAGATYCC

Original motif     Consensus sequence: CATATRCA Reverse complement motif     Consensus sequence: TGMATATG


Dataset #: 4
Motif ID: 160
Motif name: brCAGGGCCrs
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0730966

Alignment:
BBGGCCCTGBB
-GGKATCTG--

Original motif     Consensus sequence: BVCAGGGCCVB Reverse complement motif     Consensus sequence: BBGGCCCTGBB


Dataset #: 1 Motif ID: 23 Motif name: Motif 23

Original motif     Consensus sequence: GASAGAGA Reverse complement motif     Consensus sequence: TCTCTSTC

Best Matches for Motif ID 23 (Highest to Lowest)

Dataset #: 3
Motif ID: 113
Motif name: REST
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 13
Number of overlap: 8
Similarity score: 0.0614501

Alignment:
TTCAGCACCATGGACAGCKCC
------------GASAGAGA-

Original motif     Consensus sequence: TTCAGCACCATGGACAGCKCC Reverse complement motif     Consensus sequence: GGYGCTGTCCATGGTGCTGAA


Dataset #: 1
Motif ID: 2
Motif name: Motif 2
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0761109

Alignment:
AAAAHAAA
GASAGAGA

Original motif     Consensus sequence: AAAAHAAA Reverse complement motif     Consensus sequence: TTTDTTTT


Dataset #: 1
Motif ID: 38
Motif name: Motif 38
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.081673

Alignment:
GAGTTACA
GASAGAGA

Original motif     Consensus sequence: GAGTTACA Reverse complement motif     Consensus sequence: TGTAACTC


Dataset #: 2
Motif ID: 51
Motif name: Motif 51
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.081673

Alignment:
GAGTTACA
GASAGAGA

Original motif     Consensus sequence: GAGTTACA Reverse complement motif     Consensus sequence: TGTAACTC


Dataset #: 1
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0826138

Alignment:
CACACACA
GASAGAGA

Original motif     Consensus sequence: CACACACA Reverse complement motif     Consensus sequence: TGTGTGTG


Dataset #: 1 Motif ID: 24 Motif name: Motif 24

Original motif     Consensus sequence: TGTGGGTG Reverse complement motif     Consensus sequence: CACCCACA

Best Matches for Motif ID 24 (Highest to Lowest)

Dataset #: 1
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0589779

Alignment:
TGTGTGTG
TGTGGGTG

Original motif     Consensus sequence: CACACACA Reverse complement motif     Consensus sequence: TGTGTGTG


Dataset #: 4
Motif ID: 162
Motif name: ccAsCCCCAcc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.060611

Alignment:
DBTGGGGSTVD
--TGTGGGTG-

Original motif     Consensus sequence: HVASCCCCABH Reverse complement motif     Consensus sequence: DBTGGGGSTVD


Dataset #: 3
Motif ID: 114
Motif name: RUNX1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0649239

Alignment:
AAACCACAKVB
CACCCACA---

Original motif     Consensus sequence: BBYTGTGGTTT Reverse complement motif     Consensus sequence: AAACCACAKVB


Dataset #: 1
Motif ID: 31
Motif name: Motif 31
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0828996

Alignment:
CATGYACA
CACCCACA

Original motif     Consensus sequence: CATGYACA Reverse complement motif     Consensus sequence: TGTKCATG


Dataset #: 1
Motif ID: 34
Motif name: Motif 34
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0843302

Alignment:
TGTGGYCA
TGTGGGTG

Original motif     Consensus sequence: TGKCCACA Reverse complement motif     Consensus sequence: TGTGGYCA


Dataset #: 1 Motif ID: 25 Motif name: Motif 25

Original motif     Consensus sequence: CTGRGTTC Reverse complement motif     Consensus sequence: GAACKCAG

Best Matches for Motif ID 25 (Highest to Lowest)

Dataset #: 1
Motif ID: 33
Motif name: Motif 33
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0224867

Alignment:
CTGGCTWC
CTGRGTTC

Original motif     Consensus sequence: CTGGCTWC Reverse complement motif     Consensus sequence: GWAGCCAG


Dataset #: 1
Motif ID: 10
Motif name: Motif 10
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.034485

Alignment:
CTGGCCTC
CTGRGTTC

Original motif     Consensus sequence: CTGGCCTC Reverse complement motif     Consensus sequence: GAGGCCAG


Dataset #: 2
Motif ID: 49
Motif name: Motif 49
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.052298

Alignment:
CTGGCCTC
CTGRGTTC

Original motif     Consensus sequence: CTGGCCTC Reverse complement motif     Consensus sequence: GAGGCCAG


Dataset #: 3
Motif ID: 107
Motif name: NR2F1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 6
Number of overlap: 8
Similarity score: 0.0551569

Alignment:
TGAMCTTTGMMCYT
-GAACKCAG-----

Original motif     Consensus sequence: TGAMCTTTGMMCYT Reverse complement motif     Consensus sequence: AKGYYCAAAGRTCA


Dataset #: 1
Motif ID: 37
Motif name: Motif 37
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0560348

Alignment:
CTGAGCYA
CTGRGTTC

Original motif     Consensus sequence: CTGAGCYA Reverse complement motif     Consensus sequence: TKGCTCAG


Dataset #: 1 Motif ID: 26 Motif name: Motif 26

Original motif     Consensus sequence: CAGAGGAY Reverse complement motif     Consensus sequence: KTCCTCTG

Best Matches for Motif ID 26 (Highest to Lowest)

Dataset #: 4
Motif ID: 136
Motif name: dwCAGAAGwh
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0359628

Alignment:
DHCAGAAGDH
--CAGAGGAY

Original motif     Consensus sequence: DHCAGAAGDH Reverse complement motif     Consensus sequence: HDCTTCTGHD


Dataset #: 4
Motif ID: 166
Motif name: CasCAGrGGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.036576

Alignment:
CACCAGRGGGCRSB
---CAGAGGAY---

Original motif     Consensus sequence: CACCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCKCTGGTG


Dataset #: 4
Motif ID: 143
Motif name: AgmAGAGGGCrscAGak
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 8
Number of overlap: 8
Similarity score: 0.0438271

Alignment:
AGMAGAGGGCASCAGAK
--CAGAGGAY-------

Original motif     Consensus sequence: AGMAGAGGGCASCAGAK Reverse complement motif     Consensus sequence: RTCTGSTGCCCTCTYCT


Dataset #: 4
Motif ID: 168
Motif name: yrcrGYGCCMyCTGGtG
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 7
Number of overlap: 8
Similarity score: 0.0450811

Alignment:
CACCAGMGGGCGCTGBD
---CAGAGGAY------

Original motif     Consensus sequence: HVCAGCGCCCYCTGGTG Reverse complement motif     Consensus sequence: CACCAGMGGGCGCTGBD


Dataset #: 4
Motif ID: 149
Motif name: asmAGRGGGCrCTGsmkc
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 9
Number of overlap: 8
Similarity score: 0.0460269

Alignment:
DBTSCAGMGCCCTCTRST
--------KTCCTCTG--

Original motif     Consensus sequence: ASMAGAGGGCRCTGSABH Reverse complement motif     Consensus sequence: DBTSCAGMGCCCTCTRST


Dataset #: 1 Motif ID: 27 Motif name: Motif 27

Original motif     Consensus sequence: CSGCCGCC Reverse complement motif     Consensus sequence: GGCGGCSG

Best Matches for Motif ID 27 (Highest to Lowest)

Dataset #: 4
Motif ID: 144
Motif name: ctCTrsyGCCmCCTast
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.0594103

Alignment:
ASTAGGYGGCMSCAGDD
----GGCGGCSG-----

Original motif     Consensus sequence: HDCTGSYGCCMCCTAST Reverse complement motif     Consensus sequence: ASTAGGYGGCMSCAGDD


Dataset #: 4
Motif ID: 169
Motif name: yvTGCyGCCmCCwGgtG
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 5
Number of overlap: 8
Similarity score: 0.0661709

Alignment:
CDCCWGGTGGCAGCAVV
-----GGCGGCSG----

Original motif     Consensus sequence: BVTGCTGCCACCWGGDG Reverse complement motif     Consensus sequence: CDCCWGGTGGCAGCAVV


Dataset #: 1
Motif ID: 17
Motif name: Motif 17
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0678225

Alignment:
CCDCCTCC
CSGCCGCC

Original motif     Consensus sequence: CCDCCTCC Reverse complement motif     Consensus sequence: GGAGGDGG


Dataset #: 4
Motif ID: 146
Motif name: myrGYGCCmCCTast
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0682918

Alignment:
ASTAGGYGGCGCTBB
----GGCGGCSG---

Original motif     Consensus sequence: VBAGCGCCMCCTAST Reverse complement motif     Consensus sequence: ASTAGGYGGCGCTBB


Dataset #: 4
Motif ID: 135
Motif name: ssCGGCCGss
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0688339

Alignment:
BSCGGCCGSV
GGCGGCSG--

Original motif     Consensus sequence: BSCGGCCGSV Reverse complement motif     Consensus sequence: VSCGGCCGSB


Dataset #: 1 Motif ID: 28 Motif name: Motif 28

Original motif     Consensus sequence: CTTCCTG Reverse complement motif     Consensus sequence: CAGGAAG

Best Matches for Motif ID 28 (Highest to Lowest)

Dataset #: 3
Motif ID: 119
Motif name: Stat3
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 7
Similarity score: 0.0301014

Alignment:
CTTCCTGGAA
CTTCCTG---

Original motif     Consensus sequence: TTCCAGGAAG Reverse complement motif     Consensus sequence: CTTCCTGGAA


Dataset #: 3
Motif ID: 84
Motif name: GABPA
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 7
Similarity score: 0.0389741

Alignment:
CCGGAAGTGVV
CAGGAAG----

Original motif     Consensus sequence: CCGGAAGTGVV Reverse complement motif     Consensus sequence: VVCACTTCCGG


Dataset #: 3
Motif ID: 80
Motif name: ELK4
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 7
Similarity score: 0.044949

Alignment:
ACCGGAAGT
-CAGGAAG-

Original motif     Consensus sequence: ACCGGAAGT Reverse complement motif     Consensus sequence: ACTTCCGGT


Dataset #: 3
Motif ID: 79
Motif name: ELK1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 7
Similarity score: 0.0709694

Alignment:
VDDCCGGAAR
---CAGGAAG

Original motif     Consensus sequence: VDDCCGGAAR Reverse complement motif     Consensus sequence: MTTCCGGHBV


Dataset #: 1
Motif ID: 19
Motif name: Motif 19
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 7
Similarity score: 0.0713134

Alignment:
CAGSCAG
CAGGAAG

Original motif     Consensus sequence: CAGSCAG Reverse complement motif     Consensus sequence: CTGSCTG


Dataset #: 1 Motif ID: 29 Motif name: Motif 29

Original motif     Consensus sequence: CATTTCY Reverse complement motif     Consensus sequence: MGAAATG

Best Matches for Motif ID 29 (Highest to Lowest)

Dataset #: 4
Motif ID: 139
Motif name: mkCTyTTCsg
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 7
Similarity score: 0.0479916

Alignment:
HBGAAAAGBD
-MGAAATG--

Original motif     Consensus sequence: HBCTTTTCBD Reverse complement motif     Consensus sequence: HBGAAAAGBD


Dataset #: 2
Motif ID: 66
Motif name: Motif 66
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 7
Similarity score: 0.050303

Alignment:
TATAAATR
-MGAAATG

Original motif     Consensus sequence: TATAAATR Reverse complement motif     Consensus sequence: KATTTATA


Dataset #: 3
Motif ID: 125
Motif name: TP53
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 12
Number of overlap: 7
Similarity score: 0.058821

Alignment:
ACATGCCCGGKCATGTCCSR
-----------CATTTCY--

Original motif     Consensus sequence: MSGGACATGYCCGGGCATGT Reverse complement motif     Consensus sequence: ACATGCCCGGKCATGTCCSR


Dataset #: 3
Motif ID: 112
Motif name: RELA
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 7
Similarity score: 0.0629654

Alignment:
GGAAATKCCC
MGAAATG---

Original motif     Consensus sequence: GGGRATTTCC Reverse complement motif     Consensus sequence: GGAAATKCCC


Dataset #: 3
Motif ID: 84
Motif name: GABPA
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 7
Similarity score: 0.0668119

Alignment:
VVCACTTCCGG
--CATTTCY--

Original motif     Consensus sequence: CCGGAAGTGVV Reverse complement motif     Consensus sequence: VVCACTTCCGG


Dataset #: 1 Motif ID: 30 Motif name: Motif 30

Original motif     Consensus sequence: CWGCAGC Reverse complement motif     Consensus sequence: GCTGCWG

Best Matches for Motif ID 30 (Highest to Lowest)

Dataset #: 3
Motif ID: 97
Motif name: Myf
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 7
Similarity score: 0.0232337

Alignment:
MRGCARCWGSWG
-----GCTGCWG

Original motif     Consensus sequence: MRGCARCWGSWG Reverse complement motif     Consensus sequence: CWSCWGMTGCKR


Dataset #: 1
Motif ID: 41
Motif name: Motif 41
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 7
Similarity score: 0.027698

Alignment:
YCAGCAGG
-CWGCAGC

Original motif     Consensus sequence: CCTGCTGK Reverse complement motif     Consensus sequence: YCAGCAGG


Dataset #: 3
Motif ID: 105
Motif name: NHLH1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 7
Similarity score: 0.032311

Alignment:
VCGCAGCTGCGV
CWGCAGC-----

Original motif     Consensus sequence: VCGCAGCTGCGB Reverse complement motif     Consensus sequence: VCGCAGCTGCGV


Dataset #: 1
Motif ID: 27
Motif name: Motif 27
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 7
Similarity score: 0.037602

Alignment:
GGCGGCSG
-GCTGCWG

Original motif     Consensus sequence: CSGCCGCC Reverse complement motif     Consensus sequence: GGCGGCSG


Dataset #: 4
Motif ID: 151
Motif name: agrCCAGmAGrg
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 5
Number of overlap: 7
Similarity score: 0.0377961

Alignment:
CKCTRCTGGCVH
-GCTGCWG----

Original motif     Consensus sequence: HVGCCAGMAGRG Reverse complement motif     Consensus sequence: CKCTRCTGGCVH


Dataset #: 1 Motif ID: 31 Motif name: Motif 31

Original motif     Consensus sequence: CATGYACA Reverse complement motif     Consensus sequence: TGTKCATG

Best Matches for Motif ID 31 (Highest to Lowest)

Dataset #: 3
Motif ID: 125
Motif name: TP53
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 8
Number of overlap: 8
Similarity score: 0.0607115

Alignment:
ACATGCCCGGKCATGTCCSR
-------TGTKCATG-----

Original motif     Consensus sequence: MSGGACATGYCCGGGCATGT Reverse complement motif     Consensus sequence: ACATGCCCGGKCATGTCCSR


Dataset #: 4
Motif ID: 152
Motif name: yrCATGCAyr
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0609044

Alignment:
BRCATGCABD
--CATGYACA

Original motif     Consensus sequence: BRCATGCABD Reverse complement motif     Consensus sequence: HVTGCATGKV


Dataset #: 1
Motif ID: 18
Motif name: Motif 18
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0666244

Alignment:
CATGYATG
CATGYACA

Original motif     Consensus sequence: CATGYATG Reverse complement motif     Consensus sequence: CATKCATG


Dataset #: 2
Motif ID: 64
Motif name: Motif 64
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0706964

Alignment:
CATATRCA
CATGYACA

Original motif     Consensus sequence: CATATRCA Reverse complement motif     Consensus sequence: TGMATATG


Dataset #: 3
Motif ID: 113
Motif name: REST
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 6
Number of overlap: 8
Similarity score: 0.0726387

Alignment:
TTCAGCACCATGGACAGCKCC
--------CATGYACA-----

Original motif     Consensus sequence: TTCAGCACCATGGACAGCKCC Reverse complement motif     Consensus sequence: GGYGCTGTCCATGGTGCTGAA


Dataset #: 1 Motif ID: 32 Motif name: Motif 32

Original motif     Consensus sequence: KAATAAA Reverse complement motif     Consensus sequence: TTTATTY

Best Matches for Motif ID 32 (Highest to Lowest)

Dataset #: 2
Motif ID: 52
Motif name: Motif 52
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 7
Similarity score: 0.017829

Alignment:
WTTTATTT
-TTTATTY

Original motif     Consensus sequence: AAATAAAW Reverse complement motif     Consensus sequence: WTTTATTT


Dataset #: 1
Motif ID: 2
Motif name: Motif 2
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 7
Similarity score: 0.0445453

Alignment:
TTTDTTTT
TTTATTY-

Original motif     Consensus sequence: AAAAHAAA Reverse complement motif     Consensus sequence: TTTDTTTT


Dataset #: 2
Motif ID: 68
Motif name: Motif 68
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 8
Number of overlap: 7
Similarity score: 0.0470498

Alignment:
TTWWWTWTTTWTTW
-------TTTATTY

Original motif     Consensus sequence: WAAWAAAWAWWWAA Reverse complement motif     Consensus sequence: TTWWWTWTTTWTTW


Dataset #: 4
Motif ID: 150
Motif name: waATwAAAATAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 7
Similarity score: 0.0674341

Alignment:
DHTATTTTWATHD
------TTTATTY

Original motif     Consensus sequence: DHATWAAAATAHD Reverse complement motif     Consensus sequence: DHTATTTTWATHD


Dataset #: 4
Motif ID: 148
Motif name: wwTwAAAAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 7
Similarity score: 0.0811175

Alignment:
HHTTTTWADD
---TTTATTY

Original motif     Consensus sequence: DDTWAAAAHH Reverse complement motif     Consensus sequence: HHTTTTWADD


Dataset #: 1 Motif ID: 33 Motif name: Motif 33

Original motif     Consensus sequence: CTGGCTWC Reverse complement motif     Consensus sequence: GWAGCCAG

Best Matches for Motif ID 33 (Highest to Lowest)

Dataset #: 2
Motif ID: 49
Motif name: Motif 49
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.011666

Alignment:
CTGGCCTC
CTGGCTWC

Original motif     Consensus sequence: CTGGCCTC Reverse complement motif     Consensus sequence: GAGGCCAG


Dataset #: 1
Motif ID: 10
Motif name: Motif 10
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.029479

Alignment:
CTGGCCTC
CTGGCTWC

Original motif     Consensus sequence: CTGGCCTC Reverse complement motif     Consensus sequence: GAGGCCAG


Dataset #: 1
Motif ID: 25
Motif name: Motif 25
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0400133

Alignment:
CTGRGTTC
CTGGCTWC

Original motif     Consensus sequence: CTGRGTTC Reverse complement motif     Consensus sequence: GAACKCAG


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.050611

Alignment:
KBKGCCCTCTYCTGGCCHV
-----------CTGGCTWC

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 4
Motif ID: 133
Motif name: shAGrGGGCAgy
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0636793

Alignment:
DBTGCCCKCTDS
-CTGGCTWC---

Original motif     Consensus sequence: SHAGRGGGCABH Reverse complement motif     Consensus sequence: DBTGCCCKCTDS


Dataset #: 1 Motif ID: 34 Motif name: Motif 34

Original motif     Consensus sequence: TGKCCACA Reverse complement motif     Consensus sequence: TGTGGYCA

Best Matches for Motif ID 34 (Highest to Lowest)

Dataset #: 4
Motif ID: 171
Motif name: ysGTGGCCACsr
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0504663

Alignment:
VBGTGGCCACVB
---TGKCCACA-

Original motif     Consensus sequence: BVGTGGCCACBV Reverse complement motif     Consensus sequence: VBGTGGCCACVB


Dataset #: 3
Motif ID: 114
Motif name: RUNX1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0690177

Alignment:
BBYTGTGGTTT
---TGTGGYCA

Original motif     Consensus sequence: BBYTGTGGTTT Reverse complement motif     Consensus sequence: AAACCACAKVB


Dataset #: 4
Motif ID: 165
Motif name: wgGCCAshAGrGGGCrsy
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 11
Number of overlap: 8
Similarity score: 0.083395

Alignment:
KBKGCCCKCTHGTGGCHH
----------TGTGGYCA

Original motif     Consensus sequence: HDGCCACHAGRGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCKCTHGTGGCHH


Dataset #: 1
Motif ID: 24
Motif name: Motif 24
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0843302

Alignment:
CACCCACA
TGKCCACA

Original motif     Consensus sequence: TGTGGGTG Reverse complement motif     Consensus sequence: CACCCACA


Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 12
Number of overlap: 8
Similarity score: 0.0872346

Alignment:
BMSMGCCYMCTKSTGGMHM
-----------TGTGGYCA

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 1 Motif ID: 35 Motif name: Motif 35

Original motif     Consensus sequence: ACAACCAY Reverse complement motif     Consensus sequence: KTGGTTGT

Best Matches for Motif ID 35 (Highest to Lowest)

Dataset #: 2
Motif ID: 57
Motif name: Motif 57
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0737654

Alignment:
ACACACAY
ACAACCAY

Original motif     Consensus sequence: ACACACAY Reverse complement motif     Consensus sequence: KTGTGTGT


Dataset #: 3
Motif ID: 113
Motif name: REST
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0887654

Alignment:
TTCAGCACCATGGACAGCKCC
---ACAACCAY----------

Original motif     Consensus sequence: TTCAGCACCATGGACAGCKCC Reverse complement motif     Consensus sequence: GGYGCTGTCCATGGTGCTGAA


Dataset #: 3
Motif ID: 120
Motif name: T
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0890625

Alignment:
TTCACACCTAG
---ACAACCAY

Original motif     Consensus sequence: CTAGGTGTGAA Reverse complement motif     Consensus sequence: TTCACACCTAG


Dataset #: 4
Motif ID: 162
Motif name: ccAsCCCCAcc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0921848

Alignment:
HVASCCCCABH
--ACAACCAY-

Original motif     Consensus sequence: HVASCCCCABH Reverse complement motif     Consensus sequence: DBTGGGGSTVD


Dataset #: 4
Motif ID: 152
Motif name: yrCATGCAyr
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0932982

Alignment:
BRCATGCABD
-ACAACCAY-

Original motif     Consensus sequence: BRCATGCABD Reverse complement motif     Consensus sequence: HVTGCATGKV


Dataset #: 1 Motif ID: 36 Motif name: Motif 36

Original motif     Consensus sequence: TCCTGGRA Reverse complement motif     Consensus sequence: TMCCAGGA

Best Matches for Motif ID 36 (Highest to Lowest)

Dataset #: 3
Motif ID: 119
Motif name: Stat3
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0190833

Alignment:
CTTCCTGGAA
--TCCTGGRA

Original motif     Consensus sequence: TTCCAGGAAG Reverse complement motif     Consensus sequence: CTTCCTGGAA


Dataset #: 4
Motif ID: 151
Motif name: agrCCAGmAGrg
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0609014

Alignment:
CKCTRCTGGCVH
---TCCTGGRA-

Original motif     Consensus sequence: HVGCCAGMAGRG Reverse complement motif     Consensus sequence: CKCTRCTGGCVH


Dataset #: 3
Motif ID: 131
Motif name: znf143
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.061907

Alignment:
BAHYTCCCAKMATGCMWYGC
----TMCCAGGA--------

Original motif     Consensus sequence: BAHYTCCCAKMATGCMWYGC Reverse complement motif     Consensus sequence: GCMWRGCATYRTGGGAMHTB


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0667495

Alignment:
KBKGCCCTCTYCTGGCCHV
---------TCCTGGRA--

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 3
Motif ID: 85
Motif name: Hand1Tcfe2a
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0719458

Alignment:
AWRCCAGAMB
-TMCCAGGA-

Original motif     Consensus sequence: BRTCTGGMWT Reverse complement motif     Consensus sequence: AWRCCAGAMB


Dataset #: 1 Motif ID: 37 Motif name: Motif 37

Original motif     Consensus sequence: CTGAGCYA Reverse complement motif     Consensus sequence: TKGCTCAG

Best Matches for Motif ID 37 (Highest to Lowest)

Dataset #: 3
Motif ID: 100
Motif name: NFE2L2
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0542114

Alignment:
TGCTDWGTCAK
--CTGAGCYA-

Original motif     Consensus sequence: RTGACWHAGCA Reverse complement motif     Consensus sequence: TGCTDWGTCAK


Dataset #: 4
Motif ID: 160
Motif name: brCAGGGCCrs
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0573364

Alignment:
BBGGCCCTGBB
-TKGCTCAG--

Original motif     Consensus sequence: BVCAGGGCCVB Reverse complement motif     Consensus sequence: BBGGCCCTGBB


Dataset #: 4
Motif ID: 142
Motif name: ctCTTAACyw
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0660909

Alignment:
DDGTTAAGHD
TKGCTCAG--

Original motif     Consensus sequence: HHCTTAACHD Reverse complement motif     Consensus sequence: DDGTTAAGHD


Dataset #: 1
Motif ID: 25
Motif name: Motif 25
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0673416

Alignment:
CTGRGTTC
CTGAGCYA

Original motif     Consensus sequence: CTGRGTTC Reverse complement motif     Consensus sequence: GAACKCAG


Dataset #: 3
Motif ID: 111
Motif name: PPARG
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0687591

Alignment:
STAGGTCACBGTGACCYABT
----------CTGAGCYA--

Original motif     Consensus sequence: STAGGTCACBGTGACCYABT Reverse complement motif     Consensus sequence: ABTMGGTCACBGTGACCTAS


Dataset #: 1 Motif ID: 38 Motif name: Motif 38

Original motif     Consensus sequence: GAGTTACA Reverse complement motif     Consensus sequence: TGTAACTC

Best Matches for Motif ID 38 (Highest to Lowest)

Dataset #: 2
Motif ID: 51
Motif name: Motif 51
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0

Alignment:
GAGTTACA
GAGTTACA

Original motif     Consensus sequence: GAGTTACA Reverse complement motif     Consensus sequence: TGTAACTC


Dataset #: 2
Motif ID: 66
Motif name: Motif 66
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0742432

Alignment:
KATTTATA
GAGTTACA

Original motif     Consensus sequence: TATAAATR Reverse complement motif     Consensus sequence: KATTTATA


Dataset #: 3
Motif ID: 117
Motif name: Spz1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0855279

Alignment:
AGGGTAWCAGC
-GAGTTACA--

Original motif     Consensus sequence: AGGGTAWCAGC Reverse complement motif     Consensus sequence: GCTGWTACCCT


Dataset #: 2
Motif ID: 69
Motif name: Motif 69
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 8
Similarity score: 0.0901267

Alignment:
CCTGGARCTGGAGT
--TGTAACTC----

Original motif     Consensus sequence: CCTGGARCTGGAGT Reverse complement motif     Consensus sequence: ACTCCAGMTCCAGG


Dataset #: 3
Motif ID: 75
Motif name: Ddit3Cebpa
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0913372

Alignment:
GGRATTGCAKHB
-GAGTTACA---

Original motif     Consensus sequence: VDRTGCAATMCC Reverse complement motif     Consensus sequence: GGRATTGCAKHB


Dataset #: 1 Motif ID: 39 Motif name: Motif 39

Original motif     Consensus sequence: BAGAAA Reverse complement motif     Consensus sequence: TTTCTB

Best Matches for Motif ID 39 (Highest to Lowest)

Dataset #: 1
Motif ID: 23
Motif name: Motif 23
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 6
Similarity score: 0.0215381

Alignment:
GASAGAGA
--BAGAAA

Original motif     Consensus sequence: GASAGAGA Reverse complement motif     Consensus sequence: TCTCTSTC


Dataset #: 1
Motif ID: 45
Motif name: Motif 45
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.0344566

Alignment:
GSAGAGA
-BAGAAA

Original motif     Consensus sequence: GSAGAGA Reverse complement motif     Consensus sequence: TCTCTSC


Dataset #: 4
Motif ID: 139
Motif name: mkCTyTTCsg
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 6
Similarity score: 0.0384118

Alignment:
HBCTTTTCBD
----TTTCTB

Original motif     Consensus sequence: HBCTTTTCBD Reverse complement motif     Consensus sequence: HBGAAAAGBD


Dataset #: 1
Motif ID: 2
Motif name: Motif 2
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0.0438306

Alignment:
TTTDTTTT
TTTCTB--

Original motif     Consensus sequence: AAAAHAAA Reverse complement motif     Consensus sequence: TTTDTTTT


Dataset #: 4
Motif ID: 136
Motif name: dwCAGAAGwh
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.0496185

Alignment:
DHCAGAAGDH
--BAGAAA--

Original motif     Consensus sequence: DHCAGAAGDH Reverse complement motif     Consensus sequence: HDCTTCTGHD


Dataset #: 1 Motif ID: 40 Motif name: Motif 40

Original motif     Consensus sequence: ARTCCCAG Reverse complement motif     Consensus sequence: CTGGGAMT

Best Matches for Motif ID 40 (Highest to Lowest)

Dataset #: 4
Motif ID: 162
Motif name: ccAsCCCCAcc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0511488

Alignment:
HVASCCCCABH
--ARTCCCAG-

Original motif     Consensus sequence: HVASCCCCABH Reverse complement motif     Consensus sequence: DBTGGGGSTVD


Dataset #: 2
Motif ID: 69
Motif name: Motif 69
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0574096

Alignment:
CCTGGARCTGGAGT
-CTGGGAMT-----

Original motif     Consensus sequence: CCTGGARCTGGAGT Reverse complement motif     Consensus sequence: ACTCCAGMTCCAGG


Dataset #: 3
Motif ID: 131
Motif name: znf143
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 11
Number of overlap: 8
Similarity score: 0.0623563

Alignment:
GCMWRGCATYRTGGGAMHTB
----------CTGGGAMT--

Original motif     Consensus sequence: BAHYTCCCAKMATGCMWYGC Reverse complement motif     Consensus sequence: GCMWRGCATYRTGGGAMHTB


Dataset #: 3
Motif ID: 125
Motif name: TP53
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 11
Number of overlap: 8
Similarity score: 0.0776137

Alignment:
MSGGACATGYCCGGGCATGT
----------CTGGGAMT--

Original motif     Consensus sequence: MSGGACATGYCCGGGCATGT Reverse complement motif     Consensus sequence: ACATGCCCGGKCATGTCCSR


Dataset #: 3
Motif ID: 114
Motif name: RUNX1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.080122

Alignment:
AAACCACAKVB
-ARTCCCAG--

Original motif     Consensus sequence: BBYTGTGGTTT Reverse complement motif     Consensus sequence: AAACCACAKVB


Dataset #: 1 Motif ID: 41 Motif name: Motif 41

Original motif     Consensus sequence: CCTGCTGK Reverse complement motif     Consensus sequence: YCAGCAGG

Best Matches for Motif ID 41 (Highest to Lowest)

Dataset #: 4
Motif ID: 151
Motif name: agrCCAGmAGrg
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.028602

Alignment:
HVGCCAGMAGRG
---YCAGCAGG-

Original motif     Consensus sequence: HVGCCAGMAGRG Reverse complement motif     Consensus sequence: CKCTRCTGGCVH


Dataset #: 4
Motif ID: 168
Motif name: yrcrGYGCCMyCTGGtG
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0340048

Alignment:
CACCAGMGGGCGCTGBD
--YCAGCAGG-------

Original motif     Consensus sequence: HVCAGCGCCCYCTGGTG Reverse complement motif     Consensus sequence: CACCAGMGGGCGCTGBD


Dataset #: 1
Motif ID: 21
Motif name: Motif 21
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0342298

Alignment:
CCTKGTGG
CCTGCTGK

Original motif     Consensus sequence: CCACYAGG Reverse complement motif     Consensus sequence: CCTKGTGG


Dataset #: 4
Motif ID: 166
Motif name: CasCAGrGGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.0366705

Alignment:
BSKGCCCKCTGGTG
----CCTGCTGK--

Original motif     Consensus sequence: CACCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCKCTGGTG


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.0407982

Alignment:
VHGGCCAGMAGAGGGCRBY
----YCAGCAGG-------

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 1 Motif ID: 42 Motif name: Motif 42

Original motif     Consensus sequence: CGCGCSG Reverse complement motif     Consensus sequence: CSGCGCG

Best Matches for Motif ID 42 (Highest to Lowest)

Dataset #: 4
Motif ID: 161
Motif name: ssCGCwGCGss
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 7
Similarity score: 0.0226692

Alignment:
VSCGCDGCGSB
----CSGCGCG

Original motif     Consensus sequence: VSCGCDGCGSB Reverse complement motif     Consensus sequence: BSCGCDGCGSV


Dataset #: 4
Motif ID: 134
Motif name: ssCGwGCGss
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 7
Similarity score: 0.0315768

Alignment:
BSCGWGCGBV
-CSGCGCG--

Original motif     Consensus sequence: BSCGWGCGBV Reverse complement motif     Consensus sequence: VBCGCWCGSB


Dataset #: 4
Motif ID: 146
Motif name: myrGYGCCmCCTast
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 7
Similarity score: 0.0331622

Alignment:
ASTAGGYGGCGCTBB
------CSGCGCG--

Original motif     Consensus sequence: VBAGCGCCMCCTAST Reverse complement motif     Consensus sequence: ASTAGGYGGCGCTBB


Dataset #: 4
Motif ID: 168
Motif name: yrcrGYGCCMyCTGGtG
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 7
Similarity score: 0.0399606

Alignment:
HVCAGCGCCCYCTGGTG
--CSGCGCG--------

Original motif     Consensus sequence: HVCAGCGCCCYCTGGTG Reverse complement motif     Consensus sequence: CACCAGMGGGCGCTGBD


Dataset #: 4
Motif ID: 170
Motif name: ssGGCrsTGCrs
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 7
Similarity score: 0.0456255

Alignment:
BVGCASMGCCVV
---CSGCGCG--

Original motif     Consensus sequence: VVGGCRSTGCVB Reverse complement motif     Consensus sequence: BVGCASMGCCVV


Dataset #: 1 Motif ID: 43 Motif name: Motif 43

Original motif     Consensus sequence: ACATYTA Reverse complement motif     Consensus sequence: TAMATGT

Best Matches for Motif ID 43 (Highest to Lowest)

Dataset #: 3
Motif ID: 120
Motif name: T
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 7
Similarity score: 0.0260628

Alignment:
TTCACACCTAG
---ACATYTA-

Original motif     Consensus sequence: CTAGGTGTGAA Reverse complement motif     Consensus sequence: TTCACACCTAG


Dataset #: 2
Motif ID: 58
Motif name: Motif 58
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 7
Similarity score: 0.0342454

Alignment:
TACATGCA
TAMATGT-

Original motif     Consensus sequence: TACATGCA Reverse complement motif     Consensus sequence: TGCATGTA


Dataset #: 2
Motif ID: 64
Motif name: Motif 64
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 7
Similarity score: 0.0444069

Alignment:
TGMATATG
TAMATGT-

Original motif     Consensus sequence: CATATRCA Reverse complement motif     Consensus sequence: TGMATATG


Dataset #: 4
Motif ID: 152
Motif name: yrCATGCAyr
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 7
Similarity score: 0.0458993

Alignment:
HVTGCATGKV
--TAMATGT-

Original motif     Consensus sequence: BRCATGCABD Reverse complement motif     Consensus sequence: HVTGCATGKV


Dataset #: 3
Motif ID: 121
Motif name: TAL1TCF3
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 7
Similarity score: 0.0525238

Alignment:
HVAMCATCTGKT
---ACATYTA--

Original motif     Consensus sequence: HVAMCATCTGKT Reverse complement motif     Consensus sequence: ARCAGATGRTVD


Dataset #: 1 Motif ID: 44 Motif name: Motif 44

Original motif     Consensus sequence: GDAAACA Reverse complement motif     Consensus sequence: TGTTTDC

Best Matches for Motif ID 44 (Highest to Lowest)

Dataset #: 4
Motif ID: 141
Motif name: raCAAAACam
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 7
Similarity score: 0.0588603

Alignment:
DACAAAACAH
--GDAAACA-

Original motif     Consensus sequence: DACAAAACAH Reverse complement motif     Consensus sequence: HTGTTTTGTD


Dataset #: 2
Motif ID: 68
Motif name: Motif 68
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 6
Number of overlap: 7
Similarity score: 0.0651624

Alignment:
WAAWAAAWAWWWAA
--GDAAACA-----

Original motif     Consensus sequence: WAAWAAAWAWWWAA Reverse complement motif     Consensus sequence: TTWWWTWTTTWTTW


Dataset #: 1
Motif ID: 33
Motif name: Motif 33
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 7
Similarity score: 0.0667857

Alignment:
CTGGCTWC
TGTTTDC-

Original motif     Consensus sequence: CTGGCTWC Reverse complement motif     Consensus sequence: GWAGCCAG


Dataset #: 1
Motif ID: 34
Motif name: Motif 34
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 7
Similarity score: 0.066941

Alignment:
TGKCCACA
-GDAAACA

Original motif     Consensus sequence: TGKCCACA Reverse complement motif     Consensus sequence: TGTGGYCA


Dataset #: 2
Motif ID: 57
Motif name: Motif 57
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 7
Similarity score: 0.0694703

Alignment:
KTGTGTGT
-TGTTTDC

Original motif     Consensus sequence: ACACACAY Reverse complement motif     Consensus sequence: KTGTGTGT


Dataset #: 1 Motif ID: 45 Motif name: Motif 45

Original motif     Consensus sequence: GSAGAGA Reverse complement motif     Consensus sequence: TCTCTSC

Best Matches for Motif ID 45 (Highest to Lowest)

Dataset #: 4
Motif ID: 140
Motif name: vkCKCTkCGk
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 7
Similarity score: 0.0315852

Alignment:
BCGYAGAGDV
--GSAGAGA-

Original motif     Consensus sequence: VDCTCTKCGB Reverse complement motif     Consensus sequence: BCGYAGAGDV


Dataset #: 1
Motif ID: 23
Motif name: Motif 23
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 7
Similarity score: 0.0364931

Alignment:
TCTCTSTC
TCTCTSC-

Original motif     Consensus sequence: GASAGAGA Reverse complement motif     Consensus sequence: TCTCTSTC


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 6
Number of overlap: 7
Similarity score: 0.0625376

Alignment:
VHGGCCAGMAGAGGGCRBY
-------GSAGAGA-----

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 4
Motif ID: 143
Motif name: AgmAGAGGGCrscAGak
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 10
Number of overlap: 7
Similarity score: 0.0633827

Alignment:
RTCTGSTGCCCTCTYCT
---------TCTCTSC-

Original motif     Consensus sequence: AGMAGAGGGCASCAGAK Reverse complement motif     Consensus sequence: RTCTGSTGCCCTCTYCT


Dataset #: 4
Motif ID: 139
Motif name: mkCTyTTCsg
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 7
Similarity score: 0.0693299

Alignment:
HBCTTTTCBD
-TCTCTSC--

Original motif     Consensus sequence: HBCTTTTCBD Reverse complement motif     Consensus sequence: HBGAAAAGBD


Dataset #: 2 Motif ID: 46 Motif name: Motif 46

Original motif     Consensus sequence: AGRKGGCR Reverse complement motif     Consensus sequence: KGCCYKCT

Best Matches for Motif ID 46 (Highest to Lowest)

Dataset #: 1
Motif ID: 1
Motif name: Motif 1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0

Alignment:
AGRKGGCR
AGRKGGCR

Original motif     Consensus sequence: AGRKGGCR Reverse complement motif     Consensus sequence: KGCCYKCT


Dataset #: 4
Motif ID: 147
Motif name: asCAGrkGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.00651548

Alignment:
ASCAGRGGGCRSB
---AGRKGGCR--

Original motif     Consensus sequence: ASCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCMCTGST


Dataset #: 4
Motif ID: 165
Motif name: wgGCCAshAGrGGGCrsy
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 9
Number of overlap: 8
Similarity score: 0.0102443

Alignment:
KBKGCCCKCTHGTGGCHH
--KGCCYKCT--------

Original motif     Consensus sequence: HDGCCACHAGRGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCKCTHGTGGCHH


Dataset #: 4
Motif ID: 166
Motif name: CasCAGrGGGCrsy
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 5
Number of overlap: 8
Similarity score: 0.0104954

Alignment:
BSKGCCCKCTGGTG
--KGCCYKCT----

Original motif     Consensus sequence: CACCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCKCTGGTG


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0165822

Alignment:
KBKGCCCTCTYCTGGCCHV
--KGCCYKCT---------

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 2 Motif ID: 47 Motif name: Motif 47

Original motif     Consensus sequence: CAGYDCC Reverse complement motif     Consensus sequence: GGDKCTG

Best Matches for Motif ID 47 (Highest to Lowest)

Dataset #: 1
Motif ID: 13
Motif name: Motif 13
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 7
Similarity score: 0

Alignment:
GGDKCTG
GGDKCTG

Original motif     Consensus sequence: CAGYDCC Reverse complement motif     Consensus sequence: GGDKCTG


Dataset #: 2
Motif ID: 53
Motif name: Motif 53
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 7
Similarity score: 0.0288002

Alignment:
GGGATCTG
-GGDKCTG

Original motif     Consensus sequence: CAGATCCC Reverse complement motif     Consensus sequence: GGGATCTG


Dataset #: 3
Motif ID: 113
Motif name: REST
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 13
Number of overlap: 7
Similarity score: 0.0502666

Alignment:
GGYGCTGTCCATGGTGCTGAA
------------GGDKCTG--

Original motif     Consensus sequence: TTCAGCACCATGGACAGCKCC Reverse complement motif     Consensus sequence: GGYGCTGTCCATGGTGCTGAA


Dataset #: 1
Motif ID: 22
Motif name: Motif 22
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 7
Similarity score: 0.0531399

Alignment:
GGKATCTG
-GGDKCTG

Original motif     Consensus sequence: CAGATYCC Reverse complement motif     Consensus sequence: GGKATCTG


Dataset #: 4
Motif ID: 160
Motif name: brCAGGGCCrs
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 7
Similarity score: 0.0559697

Alignment:
BVCAGGGCCVB
--CAGYDCC--

Original motif     Consensus sequence: BVCAGGGCCVB Reverse complement motif     Consensus sequence: BBGGCCCTGBB


Dataset #: 2 Motif ID: 48 Motif name: Motif 48

Original motif     Consensus sequence: CCACYAGR Reverse complement motif     Consensus sequence: MCTKGTGG

Best Matches for Motif ID 48 (Highest to Lowest)

Dataset #: 1
Motif ID: 21
Motif name: Motif 21
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.00903109

Alignment:
CCACYAGG
CCACYAGR

Original motif     Consensus sequence: CCACYAGG Reverse complement motif     Consensus sequence: CCTKGTGG


Dataset #: 4
Motif ID: 145
Motif name: grCCACyAGAkG
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0155354

Alignment:
DDCCACYAGAKG
--CCACYAGR--

Original motif     Consensus sequence: DDCCACYAGAKG Reverse complement motif     Consensus sequence: CYTCTKGTGGHH


Dataset #: 4
Motif ID: 158
Motif name: grCCACwAGrk
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0192652

Alignment:
DDCCACWAGRK
--CCACYAGR-

Original motif     Consensus sequence: DDCCACWAGRK Reverse complement motif     Consensus sequence: YMCTWGTGGHH


Dataset #: 4
Motif ID: 138
Motif name: grCCACyAGAkG
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0244381

Alignment:
DDCCACYAGAKG
--CCACYAGR--

Original motif     Consensus sequence: DDCCACYAGAKG Reverse complement motif     Consensus sequence: CYTCTMGTGGHH


Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 9
Number of overlap: 8
Similarity score: 0.0284404

Alignment:
BMSMGCCYMCTKSTGGMHM
--------MCTKGTGG---

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 2 Motif ID: 49 Motif name: Motif 49

Original motif     Consensus sequence: CTGGCCTC Reverse complement motif     Consensus sequence: GAGGCCAG

Best Matches for Motif ID 49 (Highest to Lowest)

Dataset #: 1
Motif ID: 10
Motif name: Motif 10
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0

Alignment:
CTGGCCTC
CTGGCCTC

Original motif     Consensus sequence: CTGGCCTC Reverse complement motif     Consensus sequence: GAGGCCAG


Dataset #: 1
Motif ID: 33
Motif name: Motif 33
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0148758

Alignment:
CTGGCTWC
CTGGCCTC

Original motif     Consensus sequence: CTGGCTWC Reverse complement motif     Consensus sequence: GWAGCCAG


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 12
Number of overlap: 8
Similarity score: 0.0362649

Alignment:
VHGGCCAGMAGAGGGCRBY
GAGGCCAG-----------

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 4
Motif ID: 171
Motif name: ysGTGGCCACsr
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0504205

Alignment:
VBGTGGCCACVB
--CTGGCCTC--

Original motif     Consensus sequence: BVGTGGCCACBV Reverse complement motif     Consensus sequence: VBGTGGCCACVB


Dataset #: 4
Motif ID: 133
Motif name: shAGrGGGCAgy
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0509007

Alignment:
SHAGRGGGCABH
---GAGGCCAG-

Original motif     Consensus sequence: SHAGRGGGCABH Reverse complement motif     Consensus sequence: DBTGCCCKCTDS


Dataset #: 2 Motif ID: 50 Motif name: Motif 50

Original motif     Consensus sequence: AGRAA Reverse complement motif     Consensus sequence: TTMCT

Best Matches for Motif ID 50 (Highest to Lowest)

Dataset #: 1
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 5
Similarity score: 0

Alignment:
AGRAAA
AGRAA-

Original motif     Consensus sequence: AGRAAA Reverse complement motif     Consensus sequence: TTTMCT


Dataset #: 1
Motif ID: 39
Motif name: Motif 39
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 5
Similarity score: 0.0244128

Alignment:
BAGAAA
-AGRAA

Original motif     Consensus sequence: BAGAAA Reverse complement motif     Consensus sequence: TTTCTB


Dataset #: 1
Motif ID: 28
Motif name: Motif 28
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 5
Similarity score: 0.0419638

Alignment:
CAGGAAG
-AGRAA-

Original motif     Consensus sequence: CTTCCTG Reverse complement motif     Consensus sequence: CAGGAAG


Dataset #: 1
Motif ID: 29
Motif name: Motif 29
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 5
Similarity score: 0.0427966

Alignment:
CATTTCY
TTMCT--

Original motif     Consensus sequence: CATTTCY Reverse complement motif     Consensus sequence: MGAAATG


Dataset #: 3
Motif ID: 119
Motif name: Stat3
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 5
Similarity score: 0.0502276

Alignment:
TTCCAGGAAG
----AGRAA-

Original motif     Consensus sequence: TTCCAGGAAG Reverse complement motif     Consensus sequence: CTTCCTGGAA


Dataset #: 2 Motif ID: 51 Motif name: Motif 51

Original motif     Consensus sequence: GAGTTACA Reverse complement motif     Consensus sequence: TGTAACTC

Best Matches for Motif ID 51 (Highest to Lowest)

Dataset #: 1
Motif ID: 38
Motif name: Motif 38
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0

Alignment:
GAGTTACA
GAGTTACA

Original motif     Consensus sequence: GAGTTACA Reverse complement motif     Consensus sequence: TGTAACTC


Dataset #: 2
Motif ID: 66
Motif name: Motif 66
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0742432

Alignment:
KATTTATA
GAGTTACA

Original motif     Consensus sequence: TATAAATR Reverse complement motif     Consensus sequence: KATTTATA


Dataset #: 3
Motif ID: 75
Motif name: Ddit3Cebpa
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0857192

Alignment:
GGRATTGCAKHB
-GAGTTACA---

Original motif     Consensus sequence: VDRTGCAATMCC Reverse complement motif     Consensus sequence: GGRATTGCAKHB


Dataset #: 3
Motif ID: 117
Motif name: Spz1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0885417

Alignment:
AGGGTAWCAGC
-GAGTTACA--

Original motif     Consensus sequence: AGGGTAWCAGC Reverse complement motif     Consensus sequence: GCTGWTACCCT


Dataset #: 3
Motif ID: 112
Motif name: RELA
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0911946

Alignment:
GGGRATTTCC
--GAGTTACA

Original motif     Consensus sequence: GGGRATTTCC Reverse complement motif     Consensus sequence: GGAAATKCCC


Dataset #: 2 Motif ID: 52 Motif name: Motif 52

Original motif     Consensus sequence: AAATAAAW Reverse complement motif     Consensus sequence: WTTTATTT

Best Matches for Motif ID 52 (Highest to Lowest)

Dataset #: 2
Motif ID: 68
Motif name: Motif 68
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0178205

Alignment:
TTWWWTWTTTWTTW
------WTTTATTT

Original motif     Consensus sequence: WAAWAAAWAWWWAA Reverse complement motif     Consensus sequence: TTWWWTWTTTWTTW


Dataset #: 4
Motif ID: 150
Motif name: waATwAAAATAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0502803

Alignment:
DHTATTTTWATHD
-----WTTTATTT

Original motif     Consensus sequence: DHATWAAAATAHD Reverse complement motif     Consensus sequence: DHTATTTTWATHD


Dataset #: 1
Motif ID: 2
Motif name: Motif 2
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0573886

Alignment:
AAAAHAAA
AAATAAAW

Original motif     Consensus sequence: AAAAHAAA Reverse complement motif     Consensus sequence: TTTDTTTT


Dataset #: 4
Motif ID: 148
Motif name: wwTwAAAAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0617903

Alignment:
HHTTTTWADD
--WTTTATTT

Original motif     Consensus sequence: DDTWAAAAHH Reverse complement motif     Consensus sequence: HHTTTTWADD


Dataset #: 4
Motif ID: 157
Motif name: wtATTTTTAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0718936

Alignment:
DTATTTTTAWW
--WTTTATTT-

Original motif     Consensus sequence: DTATTTTTAWW Reverse complement motif     Consensus sequence: WWTAAAAATAD


Dataset #: 2 Motif ID: 53 Motif name: Motif 53

Original motif     Consensus sequence: CAGATCCC Reverse complement motif     Consensus sequence: GGGATCTG

Best Matches for Motif ID 53 (Highest to Lowest)

Dataset #: 1
Motif ID: 22
Motif name: Motif 22
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0

Alignment:
CAGATYCC
CAGATCCC

Original motif     Consensus sequence: CAGATYCC Reverse complement motif     Consensus sequence: GGKATCTG


Dataset #: 4
Motif ID: 149
Motif name: asmAGRGGGCrCTGsmkc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 7
Number of overlap: 8
Similarity score: 0.0479917

Alignment:
DBTSCAGMGCCCTCTRST
----CAGATCCC------

Original motif     Consensus sequence: ASMAGAGGGCRCTGSABH Reverse complement motif     Consensus sequence: DBTSCAGMGCCCTCTRST


Dataset #: 4
Motif ID: 160
Motif name: brCAGGGCCrs
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0605671

Alignment:
BBGGCCCTGBB
-GGGATCTG--

Original motif     Consensus sequence: BVCAGGGCCVB Reverse complement motif     Consensus sequence: BBGGCCCTGBB


Dataset #: 2
Motif ID: 69
Motif name: Motif 69
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.0606088

Alignment:
ACTCCAGMTCCAGG
----CAGATCCC--

Original motif     Consensus sequence: CCTGGARCTGGAGT Reverse complement motif     Consensus sequence: ACTCCAGMTCCAGG


Dataset #: 4
Motif ID: 168
Motif name: yrcrGYGCCMyCTGGtG
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.065385

Alignment:
CACCAGMGGGCGCTGBD
-------GGGATCTG--

Original motif     Consensus sequence: HVCAGCGCCCYCTGGTG Reverse complement motif     Consensus sequence: CACCAGMGGGCGCTGBD


Dataset #: 2 Motif ID: 54 Motif name: Motif 54

Original motif     Consensus sequence: ATTYY Reverse complement motif     Consensus sequence: MKAAT

Best Matches for Motif ID 54 (Highest to Lowest)

Dataset #: 4
Motif ID: 157
Motif name: wtATTTTTAww
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 5
Similarity score: 0.0491344

Alignment:
DTATTTTTAWW
--ATTYY----

Original motif     Consensus sequence: DTATTTTTAWW Reverse complement motif     Consensus sequence: WWTAAAAATAD


Dataset #: 1
Motif ID: 29
Motif name: Motif 29
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 5
Similarity score: 0.0551561

Alignment:
CATTTCY
-ATTYY-

Original motif     Consensus sequence: CATTTCY Reverse complement motif     Consensus sequence: MGAAATG


Dataset #: 4
Motif ID: 150
Motif name: waATwAAAATAww
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 6
Number of overlap: 5
Similarity score: 0.0567288

Alignment:
DHTATTTTWATHD
---ATTYY-----

Original motif     Consensus sequence: DHATWAAAATAHD Reverse complement motif     Consensus sequence: DHTATTTTWATHD


Dataset #: 4
Motif ID: 148
Motif name: wwTwAAAAww
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 5
Similarity score: 0.0727457

Alignment:
HHTTTTWADD
-ATTYY----

Original motif     Consensus sequence: DDTWAAAAHH Reverse complement motif     Consensus sequence: HHTTTTWADD


Dataset #: 3
Motif ID: 131
Motif name: znf143
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 9
Number of overlap: 5
Similarity score: 0.0737392

Alignment:
BAHYTCCCAKMATGCMWYGC
--------MKAAT-------

Original motif     Consensus sequence: BAHYTCCCAKMATGCMWYGC Reverse complement motif     Consensus sequence: GCMWRGCATYRTGGGAMHTB


Dataset #: 2 Motif ID: 55 Motif name: Motif 55

Original motif     Consensus sequence: GCTCACAA Reverse complement motif     Consensus sequence: TTGTGAGC

Best Matches for Motif ID 55 (Highest to Lowest)

Dataset #: 1
Motif ID: 15
Motif name: Motif 15
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.071643

Alignment:
GCTCTTAA
GCTCACAA

Original motif     Consensus sequence: GCTCTTAA Reverse complement motif     Consensus sequence: TTAAGAGC


Dataset #: 2
Motif ID: 57
Motif name: Motif 57
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0907452

Alignment:
KTGTGTGT
TTGTGAGC

Original motif     Consensus sequence: ACACACAY Reverse complement motif     Consensus sequence: KTGTGTGT


Dataset #: 4
Motif ID: 145
Motif name: grCCACyAGAkG
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.0949146

Alignment:
CYTCTKGTGGHH
----TTGTGAGC

Original motif     Consensus sequence: DDCCACYAGAKG Reverse complement motif     Consensus sequence: CYTCTKGTGGHH


Dataset #: 4
Motif ID: 158
Motif name: grCCACwAGrk
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0951691

Alignment:
DDCCACWAGRK
GCTCACAA---

Original motif     Consensus sequence: DDCCACWAGRK Reverse complement motif     Consensus sequence: YMCTWGTGGHH


Dataset #: 3
Motif ID: 76
Motif name: E2F1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.103125

Alignment:
GCGCSAAA
GCTCACAA

Original motif     Consensus sequence: TTTSGCGC Reverse complement motif     Consensus sequence: GCGCSAAA


Dataset #: 2 Motif ID: 56 Motif name: Motif 56

Original motif     Consensus sequence: CCACATGG Reverse complement motif     Consensus sequence: CCATGTGG

Best Matches for Motif ID 56 (Highest to Lowest)

Dataset #: 1
Motif ID: 21
Motif name: Motif 21
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0480363

Alignment:
CCTKGTGG
CCATGTGG

Original motif     Consensus sequence: CCACYAGG Reverse complement motif     Consensus sequence: CCTKGTGG


Dataset #: 2
Motif ID: 48
Motif name: Motif 48
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0609421

Alignment:
MCTKGTGG
CCATGTGG

Original motif     Consensus sequence: CCACYAGR Reverse complement motif     Consensus sequence: MCTKGTGG


Dataset #: 3
Motif ID: 95
Motif name: MYCMAX
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0616071

Alignment:
RASCACGTGGT
--CCACATGG-

Original motif     Consensus sequence: RASCACGTGGT Reverse complement motif     Consensus sequence: ACCACGTGSTM


Dataset #: 3
Motif ID: 96
Motif name: Mycn
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0634989

Alignment:
HSCACGTGGC
-CCACATGG-

Original motif     Consensus sequence: HSCACGTGGC Reverse complement motif     Consensus sequence: GCCACGTGSD


Dataset #: 4
Motif ID: 158
Motif name: grCCACwAGrk
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0666667

Alignment:
DDCCACWAGRK
--CCACATGG-

Original motif     Consensus sequence: DDCCACWAGRK Reverse complement motif     Consensus sequence: YMCTWGTGGHH


Dataset #: 2 Motif ID: 57 Motif name: Motif 57

Original motif     Consensus sequence: ACACACAY Reverse complement motif     Consensus sequence: KTGTGTGT

Best Matches for Motif ID 57 (Highest to Lowest)

Dataset #: 1
Motif ID: 35
Motif name: Motif 35
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0591808

Alignment:
ACAACCAY
ACACACAY

Original motif     Consensus sequence: ACAACCAY Reverse complement motif     Consensus sequence: KTGGTTGT


Dataset #: 3
Motif ID: 114
Motif name: RUNX1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0712868

Alignment:
BBYTGTGGTTT
--KTGTGTGT-

Original motif     Consensus sequence: BBYTGTGGTTT Reverse complement motif     Consensus sequence: AAACCACAKVB


Dataset #: 3
Motif ID: 120
Motif name: T
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0758601

Alignment:
TTCACACCTAG
-ACACACAY--

Original motif     Consensus sequence: CTAGGTGTGAA Reverse complement motif     Consensus sequence: TTCACACCTAG


Dataset #: 2
Motif ID: 55
Motif name: Motif 55
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0761605

Alignment:
TTGTGAGC
KTGTGTGT

Original motif     Consensus sequence: GCTCACAA Reverse complement motif     Consensus sequence: TTGTGAGC


Dataset #: 4
Motif ID: 162
Motif name: ccAsCCCCAcc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0776002

Alignment:
HVASCCCCABH
--ACACACAY-

Original motif     Consensus sequence: HVASCCCCABH Reverse complement motif     Consensus sequence: DBTGGGGSTVD


Dataset #: 2 Motif ID: 58 Motif name: Motif 58

Original motif     Consensus sequence: TACATGCA Reverse complement motif     Consensus sequence: TGCATGTA

Best Matches for Motif ID 58 (Highest to Lowest)

Dataset #: 4
Motif ID: 152
Motif name: yrCATGCAyr
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0160706

Alignment:
HVTGCATGKV
--TGCATGTA

Original motif     Consensus sequence: BRCATGCABD Reverse complement motif     Consensus sequence: HVTGCATGKV


Dataset #: 3
Motif ID: 125
Motif name: TP53
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0595681

Alignment:
ACATGCCCGGKCATGTCCSR
---------TGCATGTA---

Original motif     Consensus sequence: MSGGACATGYCCGGGCATGT Reverse complement motif     Consensus sequence: ACATGCCCGGKCATGTCCSR


Dataset #: 2
Motif ID: 64
Motif name: Motif 64
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0642891

Alignment:
CATATRCA
TACATGCA

Original motif     Consensus sequence: CATATRCA Reverse complement motif     Consensus sequence: TGMATATG


Dataset #: 1
Motif ID: 36
Motif name: Motif 36
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0792922

Alignment:
TCCTGGRA
TGCATGTA

Original motif     Consensus sequence: TCCTGGRA Reverse complement motif     Consensus sequence: TMCCAGGA


Dataset #: 3
Motif ID: 95
Motif name: MYCMAX
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0822408

Alignment:
RASCACGTGGT
-TGCATGTA--

Original motif     Consensus sequence: RASCACGTGGT Reverse complement motif     Consensus sequence: ACCACGTGSTM


Dataset #: 2 Motif ID: 59 Motif name: Motif 59

Original motif     Consensus sequence: CCCCRCCC Reverse complement motif     Consensus sequence: GGGKGGGG

Best Matches for Motif ID 59 (Highest to Lowest)

Dataset #: 1
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.00363191

Alignment:
CCCCDCCC
CCCCRCCC

Original motif     Consensus sequence: CCCCDCCC Reverse complement motif     Consensus sequence: GGGDGGGG


Dataset #: 4
Motif ID: 155
Motif name: csCSCCdCCCcs
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0143924

Alignment:
VDGGGDGGGGBV
--GGGKGGGG--

Original motif     Consensus sequence: VBCCCCDCCCHV Reverse complement motif     Consensus sequence: VDGGGDGGGGBV


Dataset #: 3
Motif ID: 89
Motif name: Klf4
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0334874

Alignment:
GCCYCMCCCD
-CCCCRCCC-

Original motif     Consensus sequence: DGGGYGKGGC Reverse complement motif     Consensus sequence: GCCYCMCCCD


Dataset #: 3
Motif ID: 116
Motif name: SP1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0421627

Alignment:
GGGGGYGGGG
--GGGKGGGG

Original motif     Consensus sequence: CCCCKCCCCC Reverse complement motif     Consensus sequence: GGGGGYGGGG


Dataset #: 4
Motif ID: 154
Motif name: csCsCCTCCcc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0467112

Alignment:
VBCCCCTCCHB
--CCCCRCCC-

Original motif     Consensus sequence: VBCCCCTCCHB Reverse complement motif     Consensus sequence: BDGGAGGGGBV


Dataset #: 2 Motif ID: 60 Motif name: Motif 60

Original motif     Consensus sequence: CTGGAR Reverse complement motif     Consensus sequence: MTCCAG

Best Matches for Motif ID 60 (Highest to Lowest)

Dataset #: 1
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.00500479

Alignment:
CTGGRRA
CTGGAR-

Original motif     Consensus sequence: CTGGRRA Reverse complement motif     Consensus sequence: TMMCCAG


Dataset #: 2
Motif ID: 69
Motif name: Motif 69
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 8
Number of overlap: 6
Similarity score: 0.0149252

Alignment:
CCTGGARCTGGAGT
-------CTGGAR-

Original motif     Consensus sequence: CCTGGARCTGGAGT Reverse complement motif     Consensus sequence: ACTCCAGMTCCAGG


Dataset #: 1
Motif ID: 36
Motif name: Motif 36
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.0273394

Alignment:
TCCTGGRA
--CTGGAR

Original motif     Consensus sequence: TCCTGGRA Reverse complement motif     Consensus sequence: TMCCAGGA


Dataset #: 4
Motif ID: 151
Motif name: agrCCAGmAGrg
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 6
Number of overlap: 6
Similarity score: 0.0324331

Alignment:
CKCTRCTGGCVH
-----CTGGAR-

Original motif     Consensus sequence: HVGCCAGMAGRG Reverse complement motif     Consensus sequence: CKCTRCTGGCVH


Dataset #: 3
Motif ID: 85
Motif name: Hand1Tcfe2a
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 6
Similarity score: 0.0370865

Alignment:
BRTCTGGMWT
---CTGGAR-

Original motif     Consensus sequence: BRTCTGGMWT Reverse complement motif     Consensus sequence: AWRCCAGAMB


Dataset #: 2 Motif ID: 61 Motif name: Motif 61

Original motif     Consensus sequence: AGATGGY Reverse complement motif     Consensus sequence: KCCATCT

Best Matches for Motif ID 61 (Highest to Lowest)

Dataset #: 2
Motif ID: 63
Motif name: Motif 63
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 7
Similarity score: 0.0339703

Alignment:
CWCCCTCT
-KCCATCT

Original motif     Consensus sequence: AGAGGGWG Reverse complement motif     Consensus sequence: CWCCCTCT


Dataset #: 3
Motif ID: 121
Motif name: TAL1TCF3
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 7
Similarity score: 0.034782

Alignment:
ARCAGATGRTVD
---AGATGGY--

Original motif     Consensus sequence: HVAMCATCTGKT Reverse complement motif     Consensus sequence: ARCAGATGRTVD


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 7
Similarity score: 0.0365189

Alignment:
VHGGCCAGMAGAGGGCRBY
---------AGATGGY---

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 2
Motif ID: 46
Motif name: Motif 46
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 7
Similarity score: 0.0371728

Alignment:
AGRKGGCR
AGATGGY-

Original motif     Consensus sequence: AGRKGGCR Reverse complement motif     Consensus sequence: KGCCYKCT


Dataset #: 1
Motif ID: 1
Motif name: Motif 1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 7
Similarity score: 0.0375558

Alignment:
AGRKGGCR
AGATGGY-

Original motif     Consensus sequence: AGRKGGCR Reverse complement motif     Consensus sequence: KGCCYKCT


Dataset #: 2 Motif ID: 62 Motif name: Motif 62

Original motif     Consensus sequence: CGCCVCC Reverse complement motif     Consensus sequence: GGVGGCG

Best Matches for Motif ID 62 (Highest to Lowest)

Dataset #: 4
Motif ID: 146
Motif name: myrGYGCCmCCTast
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 7
Similarity score: 0.0315476

Alignment:
VBAGCGCCMCCTAST
----CGCCVCC----

Original motif     Consensus sequence: VBAGCGCCMCCTAST Reverse complement motif     Consensus sequence: ASTAGGYGGCGCTBB


Dataset #: 1
Motif ID: 27
Motif name: Motif 27
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 7
Similarity score: 0.0348335

Alignment:
CSGCCGCC
-CGCCVCC

Original motif     Consensus sequence: CSGCCGCC Reverse complement motif     Consensus sequence: GGCGGCSG


Dataset #: 4
Motif ID: 137
Motif name: rgCGCCmyCTgs
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 7
Similarity score: 0.0357527

Alignment:
SHAGKGGGCGCB
---GGVGGCG--

Original motif     Consensus sequence: VGCGCCCYCTDS Reverse complement motif     Consensus sequence: SHAGKGGGCGCB


Dataset #: 4
Motif ID: 153
Motif name: scAGrkGGCGcy
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 7
Similarity score: 0.0403279

Alignment:
VGCGCCCMCTDS
--CGCCVCC---

Original motif     Consensus sequence: SHAGRGGGCGCB Reverse complement motif     Consensus sequence: VGCGCCCMCTDS


Dataset #: 4
Motif ID: 155
Motif name: csCSCCdCCCcs
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 7
Similarity score: 0.0439081

Alignment:
VBCCCCDCCCHV
--CGCCVCC---

Original motif     Consensus sequence: VBCCCCDCCCHV Reverse complement motif     Consensus sequence: VDGGGDGGGGBV


Dataset #: 2 Motif ID: 63 Motif name: Motif 63

Original motif     Consensus sequence: AGAGGGWG Reverse complement motif     Consensus sequence: CWCCCTCT

Best Matches for Motif ID 63 (Highest to Lowest)

Dataset #: 1
Motif ID: 11
Motif name: Motif 11
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0323316

Alignment:
MGAGGBAG
AGAGGGWG

Original motif     Consensus sequence: CTBCCTCY Reverse complement motif     Consensus sequence: MGAGGBAG


Dataset #: 4
Motif ID: 149
Motif name: asmAGRGGGCrCTGsmkc
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 8
Number of overlap: 8
Similarity score: 0.040911

Alignment:
DBTSCAGMGCCCTCTRST
-------CWCCCTCT---

Original motif     Consensus sequence: ASMAGAGGGCRCTGSABH Reverse complement motif     Consensus sequence: DBTSCAGMGCCCTCTRST


Dataset #: 4
Motif ID: 153
Motif name: scAGrkGGCGcy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0435349

Alignment:
SHAGRGGGCGCB
--AGAGGGWG--

Original motif     Consensus sequence: SHAGRGGGCGCB Reverse complement motif     Consensus sequence: VGCGCCCMCTDS


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0462891

Alignment:
VHGGCCAGMAGAGGGCRBY
---------AGAGGGWG--

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 4
Motif ID: 137
Motif name: rgCGCCmyCTgs
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0481673

Alignment:
VGCGCCCYCTDS
--CWCCCTCT--

Original motif     Consensus sequence: VGCGCCCYCTDS Reverse complement motif     Consensus sequence: SHAGKGGGCGCB


Dataset #: 2 Motif ID: 64 Motif name: Motif 64

Original motif     Consensus sequence: CATATRCA Reverse complement motif     Consensus sequence: TGMATATG

Best Matches for Motif ID 64 (Highest to Lowest)

Dataset #: 1
Motif ID: 31
Motif name: Motif 31
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0465487

Alignment:
CATGYACA
CATATRCA

Original motif     Consensus sequence: CATGYACA Reverse complement motif     Consensus sequence: TGTKCATG


Dataset #: 1
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0585881

Alignment:
CACACACA
CATATRCA

Original motif     Consensus sequence: CACACACA Reverse complement motif     Consensus sequence: TGTGTGTG


Dataset #: 2
Motif ID: 58
Motif name: Motif 58
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0607109

Alignment:
TACATGCA
CATATRCA

Original motif     Consensus sequence: TACATGCA Reverse complement motif     Consensus sequence: TGCATGTA


Dataset #: 4
Motif ID: 152
Motif name: yrCATGCAyr
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0626249

Alignment:
BRCATGCABD
CATATRCA--

Original motif     Consensus sequence: BRCATGCABD Reverse complement motif     Consensus sequence: HVTGCATGKV


Dataset #: 2
Motif ID: 69
Motif name: Motif 69
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.0676075

Alignment:
ACTCCAGMTCCAGG
----CATATRCA--

Original motif     Consensus sequence: CCTGGARCTGGAGT Reverse complement motif     Consensus sequence: ACTCCAGMTCCAGG


Dataset #: 2 Motif ID: 65 Motif name: Motif 65

Original motif     Consensus sequence: ARAACA Reverse complement motif     Consensus sequence: TGTTMT

Best Matches for Motif ID 65 (Highest to Lowest)

Dataset #: 4
Motif ID: 141
Motif name: raCAAAACam
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 6
Similarity score: 0.00122368

Alignment:
DACAAAACAH
---ARAACA-

Original motif     Consensus sequence: DACAAAACAH Reverse complement motif     Consensus sequence: HTGTTTTGTD


Dataset #: 1
Motif ID: 44
Motif name: Motif 44
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.0101983

Alignment:
GDAAACA
-ARAACA

Original motif     Consensus sequence: GDAAACA Reverse complement motif     Consensus sequence: TGTTTDC


Dataset #: 4
Motif ID: 159
Motif name: kkAAGAGCAsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.0232212

Alignment:
DBAAGAGCAVH
---ARAACA--

Original motif     Consensus sequence: DBAAGAGCAVH Reverse complement motif     Consensus sequence: HVTGCTCTTBH


Dataset #: 3
Motif ID: 121
Motif name: TAL1TCF3
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 7
Number of overlap: 6
Similarity score: 0.0330056

Alignment:
HVAMCATCTGKT
ARAACA------

Original motif     Consensus sequence: HVAMCATCTGKT Reverse complement motif     Consensus sequence: ARCAGATGRTVD


Dataset #: 1
Motif ID: 2
Motif name: Motif 2
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.0333069

Alignment:
AAAAHAAA
ARAACA--

Original motif     Consensus sequence: AAAAHAAA Reverse complement motif     Consensus sequence: TTTDTTTT


Dataset #: 2 Motif ID: 66 Motif name: Motif 66

Original motif     Consensus sequence: TATAAATR Reverse complement motif     Consensus sequence: KATTTATA

Best Matches for Motif ID 66 (Highest to Lowest)

Dataset #: 4
Motif ID: 157
Motif name: wtATTTTTAww
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.00950221

Alignment:
WWTAAAAATAD
--TATAAATR-

Original motif     Consensus sequence: DTATTTTTAWW Reverse complement motif     Consensus sequence: WWTAAAAATAD


Dataset #: 4
Motif ID: 150
Motif name: waATwAAAATAww
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0358566

Alignment:
DHATWAAAATAHD
---TATAAATR--

Original motif     Consensus sequence: DHATWAAAATAHD Reverse complement motif     Consensus sequence: DHTATTTTWATHD


Dataset #: 1
Motif ID: 38
Motif name: Motif 38
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0432007

Alignment:
TGTAACTC
TATAAATR

Original motif     Consensus sequence: GAGTTACA Reverse complement motif     Consensus sequence: TGTAACTC


Dataset #: 2
Motif ID: 51
Motif name: Motif 51
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0432007

Alignment:
TGTAACTC
TATAAATR

Original motif     Consensus sequence: GAGTTACA Reverse complement motif     Consensus sequence: TGTAACTC


Dataset #: 2
Motif ID: 68
Motif name: Motif 68
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 6
Number of overlap: 8
Similarity score: 0.0496717

Alignment:
WAAWAAAWAWWWAA
-TATAAATR-----

Original motif     Consensus sequence: WAAWAAAWAWWWAA Reverse complement motif     Consensus sequence: TTWWWTWTTTWTTW


Dataset #: 2 Motif ID: 67 Motif name: Motif 67

Original motif     Consensus sequence: SYGCCCYCTDSTGG Reverse complement motif     Consensus sequence: CCASHAGKGGGCKS

Best Matches for Motif ID 67 (Highest to Lowest)

Dataset #: 4
Motif ID: 156
Motif name: rgyGCCMyCTksTGGccd
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 14
Similarity score: 0

Alignment:
RVYGCCCYCTKSTGGCHD
-SYGCCCYCTDSTGG---

Original motif     Consensus sequence: RVYGCCCYCTKSTGGCHD Reverse complement motif     Consensus sequence: DDGCCASYAGMGGGCKVM


Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 14
Similarity score: 0.0137353

Alignment:
BMSMGCCYMCTKSTGGMHM
--SYGCCCYCTDSTGG---

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 4
Motif ID: 165
Motif name: wgGCCAshAGrGGGCrsy
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 14
Similarity score: 0.0259772

Alignment:
HDGCCACHAGRGGGCRBY
---CCASHAGKGGGCKS-

Original motif     Consensus sequence: HDGCCACHAGRGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCKCTHGTGGCHH


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 14
Similarity score: 0.0316372

Alignment:
VHGGCCAGMAGAGGGCRBY
----CCASHAGKGGGCKS-

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 4
Motif ID: 169
Motif name: yvTGCyGCCmCCwGgtG
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 14
Similarity score: 0.0786902

Alignment:
BVTGCTGCCACCWGGDG
-SYGCCCYCTDSTGG--

Original motif     Consensus sequence: BVTGCTGCCACCWGGDG Reverse complement motif     Consensus sequence: CDCCWGGTGGCAGCAVV


Dataset #: 2 Motif ID: 68 Motif name: Motif 68

Original motif     Consensus sequence: WAAWAAAWAWWWAA Reverse complement motif     Consensus sequence: TTWWWTWTTTWTTW

Best Matches for Motif ID 68 (Highest to Lowest)

Dataset #: 4
Motif ID: 150
Motif name: waATwAAAATAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 13
Similarity score: 0.0423083

Alignment:
-DHTATTTTWATHD
TTWWWTWTTTWTTW

Original motif     Consensus sequence: DHATWAAAATAHD Reverse complement motif     Consensus sequence: DHTATTTTWATHD


Dataset #: 4
Motif ID: 157
Motif name: wtATTTTTAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 1.06057

Alignment:
DTATTTTTAWW---
TTWWWTWTTTWTTW

Original motif     Consensus sequence: DTATTTTTAWW Reverse complement motif     Consensus sequence: WWTAAAAATAD


Dataset #: 4
Motif ID: 148
Motif name: wwTwAAAAww
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 1.54726

Alignment:
DDTWAAAAHH----
WAAWAAAWAWWWAA

Original motif     Consensus sequence: DDTWAAAAHH Reverse complement motif     Consensus sequence: HHTTTTWADD


Dataset #: 4
Motif ID: 141
Motif name: raCAAAACam
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 1.55678

Alignment:
----HTGTTTTGTD
TTWWWTWTTTWTTW

Original motif     Consensus sequence: DACAAAACAH Reverse complement motif     Consensus sequence: HTGTTTTGTD


Dataset #: 2
Motif ID: 52
Motif name: Motif 52
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 2.5

Alignment:
------WTTTATTT
TTWWWTWTTTWTTW

Original motif     Consensus sequence: AAATAAAW Reverse complement motif     Consensus sequence: WTTTATTT


Dataset #: 2 Motif ID: 69 Motif name: Motif 69

Original motif     Consensus sequence: CCTGGARCTGGAGT Reverse complement motif     Consensus sequence: ACTCCAGMTCCAGG

Best Matches for Motif ID 69 (Highest to Lowest)

Dataset #: 4
Motif ID: 156
Motif name: rgyGCCMyCTksTGGccd
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.070946

Alignment:
DDGCCASYAGMGGGCKVM
ACTCCAGMTCCAGG----

Original motif     Consensus sequence: RVYGCCCYCTKSTGGCHD Reverse complement motif     Consensus sequence: DDGCCASYAGMGGGCKVM


Dataset #: 4
Motif ID: 149
Motif name: asmAGRGGGCrCTGsmkc
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 5
Number of overlap: 14
Similarity score: 0.073647

Alignment:
DBTSCAGMGCCCTCTRST
ACTCCAGMTCCAGG----

Original motif     Consensus sequence: ASMAGAGGGCRCTGSABH Reverse complement motif     Consensus sequence: DBTSCAGMGCCCTCTRST


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 14
Similarity score: 0.0761843

Alignment:
VHGGCCAGMAGAGGGCRBY
-ACTCCAGMTCCAGG----

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 3
Motif ID: 115
Motif name: RXRRAR_DR5
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0775577

Alignment:
RGKTCABVVRGAGGTCA
ACTCCAGMTCCAGG---

Original motif     Consensus sequence: RGKTCABVVRGAGGTCA Reverse complement motif     Consensus sequence: TGACCTCKVVBTGAYCK


Dataset #: 2
Motif ID: 67
Motif name: Motif 67
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0806144

Alignment:
CCASHAGKGGGCKS
CCTGGARCTGGAGT

Original motif     Consensus sequence: SYGCCCYCTDSTGG Reverse complement motif     Consensus sequence: CCASHAGKGGGCKS


Dataset #: 3 Motif ID: 70 Motif name: Ar

Original motif     Consensus sequence: HWDAGHACRHHVTGTHCCHVMV Reverse complement motif     Consensus sequence: VRVDGGHACAVDDKGTHCTDWH

Best Matches for Motif ID 70 (Highest to Lowest)

Dataset #: 3
Motif ID: 113
Motif name: REST
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 21
Similarity score: 0.0696331

Alignment:
-GGYGCTGTCCATGGTGCTGAA
VRVDGGHACAVDDKGTHCTDWH

Original motif     Consensus sequence: TTCAGCACCATGGACAGCKCC Reverse complement motif     Consensus sequence: GGYGCTGTCCATGGTGCTGAA


Dataset #: 3
Motif ID: 111
Motif name: PPARG
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.55978

Alignment:
--STAGGTCACBGTGACCYABT
VRVDGGHACAVDDKGTHCTDWH

Original motif     Consensus sequence: STAGGTCACBGTGACCYABT Reverse complement motif     Consensus sequence: ABTMGGTCACBGTGACCTAS


Dataset #: 3
Motif ID: 109
Motif name: Pax5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.564914

Alignment:
--MSGKKRCGCWDCABTGBBCD
VRVDGGHACAVDDKGTHCTDWH

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 3
Motif ID: 131
Motif name: znf143
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.566373

Alignment:
GCMWRGCATYRTGGGAMHTB--
VRVDGGHACAVDDKGTHCTDWH

Original motif     Consensus sequence: BAHYTCCCAKMATGCMWYGC Reverse complement motif     Consensus sequence: GCMWRGCATYRTGGGAMHTB


Dataset #: 3
Motif ID: 81
Motif name: ESR1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 1.05195

Alignment:
VDBHMAGGTCACCCTGACCY---
-VRVDGGHACAVDDKGTHCTDWH

Original motif     Consensus sequence: VDBHMAGGTCACCCTGACCY Reverse complement motif     Consensus sequence: MGGTCAGGGTGACCTRDBHV


Dataset #: 3 Motif ID: 71 Motif name: Arnt

Original motif     Consensus sequence: CACGTG Reverse complement motif     Consensus sequence: CACGTG

Best Matches for Motif ID 71 (Highest to Lowest)

Dataset #: 1
Motif ID: 20
Motif name: Motif 20
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0

Alignment:
MACGTG
CACGTG

Original motif     Consensus sequence: CACGTR Reverse complement motif     Consensus sequence: MACGTG


Dataset #: 3
Motif ID: 91
Motif name: MAX
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.00380329

Alignment:
BCACGTGDTD
-CACGTG---

Original motif     Consensus sequence: DAHCACGTGD Reverse complement motif     Consensus sequence: BCACGTGDTD


Dataset #: 3
Motif ID: 126
Motif name: USF1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.00445689

Alignment:
MCACGTG
-CACGTG

Original motif     Consensus sequence: CACGTGR Reverse complement motif     Consensus sequence: MCACGTG


Dataset #: 3
Motif ID: 95
Motif name: MYCMAX
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.00495292

Alignment:
RASCACGTGGT
---CACGTG--

Original motif     Consensus sequence: RASCACGTGGT Reverse complement motif     Consensus sequence: ACCACGTGSTM


Dataset #: 3
Motif ID: 94
Motif name: Myc
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.0173209

Alignment:
DCCACGTGCV
--CACGTG--

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV


Dataset #: 3 Motif ID: 72 Motif name: ArntAhr

Original motif     Consensus sequence: YGCGTG Reverse complement motif     Consensus sequence: CACGCM

Best Matches for Motif ID 72 (Highest to Lowest)

Dataset #: 3
Motif ID: 86
Motif name: HIF1AARNT
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0

Alignment:
VBACGTGV
-YGCGTG-

Original motif     Consensus sequence: VBACGTGV Reverse complement motif     Consensus sequence: VCACGTBV


Dataset #: 4
Motif ID: 134
Motif name: ssCGwGCGss
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 6
Similarity score: 0.0128947

Alignment:
BSCGWGCGBV
YGCGTG----

Original motif     Consensus sequence: BSCGWGCGBV Reverse complement motif     Consensus sequence: VBCGCWCGSB


Dataset #: 3
Motif ID: 71
Motif name: Arnt
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.0203526

Alignment:
CACGTG
YGCGTG

Original motif     Consensus sequence: CACGTG Reverse complement motif     Consensus sequence: CACGTG


Dataset #: 1
Motif ID: 20
Motif name: Motif 20
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0.0206428

Alignment:
MACGTG
YGCGTG

Original motif     Consensus sequence: CACGTR Reverse complement motif     Consensus sequence: MACGTG


Dataset #: 3
Motif ID: 126
Motif name: USF1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.0255609

Alignment:
MCACGTG
-YGCGTG

Original motif     Consensus sequence: CACGTGR Reverse complement motif     Consensus sequence: MCACGTG


Dataset #: 3 Motif ID: 73 Motif name: CREB1

Original motif     Consensus sequence: TGACGTCA Reverse complement motif     Consensus sequence: TGACGTCA

Best Matches for Motif ID 73 (Highest to Lowest)

Dataset #: 3
Motif ID: 92
Motif name: MIZF
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.00956439

Alignment:
GCGGACGTTV
--TGACGTCA

Original motif     Consensus sequence: BAACGTCCGC Reverse complement motif     Consensus sequence: GCGGACGTTV


Dataset #: 3
Motif ID: 115
Motif name: RXRRAR_DR5
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 10
Number of overlap: 8
Similarity score: 0.0133811

Alignment:
TGACCTCKVVBTGAYCK
TGACGTCA---------

Original motif     Consensus sequence: RGKTCABVVRGAGGTCA Reverse complement motif     Consensus sequence: TGACCTCKVVBTGAYCK


Dataset #: 3
Motif ID: 81
Motif name: ESR1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0197902

Alignment:
VDBHMAGGTCACCCTGACCY
---TGACGTCA---------

Original motif     Consensus sequence: VDBHMAGGTCACCCTGACCY Reverse complement motif     Consensus sequence: MGGTCAGGGTGACCTRDBHV


Dataset #: 3
Motif ID: 82
Motif name: ESR2
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0208174

Alignment:
BAGGYCABHBTGACCKHV
----------TGACGTCA

Original motif     Consensus sequence: VHRGGTCABDBTGMCCTB Reverse complement motif     Consensus sequence: BAGGYCABHBTGACCKHV


Dataset #: 1
Motif ID: 34
Motif name: Motif 34
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0253747

Alignment:
TGKCCACA
TGACGTCA

Original motif     Consensus sequence: TGKCCACA Reverse complement motif     Consensus sequence: TGTGGYCA


Dataset #: 3 Motif ID: 74 Motif name: CTCF

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM

Best Matches for Motif ID 74 (Highest to Lowest)

Dataset #: 3
Motif ID: 70
Motif name: Ar
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 19
Similarity score: 0.0903626

Alignment:
HWDAGHACRHHVTGTHCCHVMV
--BMSMGCCYMCTKSTGGMHM-

Original motif     Consensus sequence: HWDAGHACRHHVTGTHCCHVMV Reverse complement motif     Consensus sequence: VRVDGGHACAVDDKGTHCTDWH


Dataset #: 3
Motif ID: 109
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 19
Similarity score: 0.0909586

Alignment:
DGVBCABTGDWGCGKRRCSR
YDRCCASYAGRKGGCRSYV-

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 3
Motif ID: 81
Motif name: ESR1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 0.0943322

Alignment:
VDBHMAGGTCACCCTGACCY
-BMSMGCCYMCTKSTGGMHM

Original motif     Consensus sequence: VDBHMAGGTCACCCTGACCY Reverse complement motif     Consensus sequence: MGGTCAGGGTGACCTRDBHV


Dataset #: 4
Motif ID: 165
Motif name: wgGCCAshAGrGGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 18
Similarity score: 0.504548

Alignment:
HDGCCACHAGRGGGCRBY-
YDRCCASYAGRKGGCRSYV

Original motif     Consensus sequence: HDGCCACHAGRGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCKCTHGTGGCHH


Dataset #: 4
Motif ID: 156
Motif name: rgyGCCMyCTksTGGccd
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 18
Similarity score: 0.515938

Alignment:
-RVYGCCCYCTKSTGGCHD
BMSMGCCYMCTKSTGGMHM

Original motif     Consensus sequence: RVYGCCCYCTKSTGGCHD Reverse complement motif     Consensus sequence: DDGCCASYAGMGGGCKVM


Dataset #: 3 Motif ID: 75 Motif name: Ddit3Cebpa

Original motif     Consensus sequence: VDRTGCAATMCC Reverse complement motif     Consensus sequence: GGRATTGCAKHB

Best Matches for Motif ID 75 (Highest to Lowest)

Dataset #: 3
Motif ID: 104
Motif name: NFYA
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 12
Similarity score: 0.018401

Alignment:
BHVCKSATTGGMKBVV
---GGRATTGCAKHB-

Original motif     Consensus sequence: VBBRRCCAATSRGVDB Reverse complement motif     Consensus sequence: BHVCKSATTGGMKBVV


Dataset #: 3
Motif ID: 131
Motif name: znf143
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 9
Number of overlap: 12
Similarity score: 0.037862

Alignment:
BAHYTCCCAKMATGCMWYGC
GGRATTGCAKHB--------

Original motif     Consensus sequence: BAHYTCCCAKMATGCMWYGC Reverse complement motif     Consensus sequence: GCMWRGCATYRTGGGAMHTB


Dataset #: 3
Motif ID: 81
Motif name: ESR1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 12
Similarity score: 0.0416577

Alignment:
MGGTCAGGGTGACCTRDBHV
------VDRTGCAATMCC--

Original motif     Consensus sequence: VDBHMAGGTCACCCTGACCY Reverse complement motif     Consensus sequence: MGGTCAGGGTGACCTRDBHV


Dataset #: 3
Motif ID: 70
Motif name: Ar
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.0468764

Alignment:
HWDAGHACRHHVTGTHCCHVMV
----------GGRATTGCAKHB

Original motif     Consensus sequence: HWDAGHACRHHVTGTHCCHVMV Reverse complement motif     Consensus sequence: VRVDGGHACAVDDKGTHCTDWH


Dataset #: 3
Motif ID: 109
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 8
Number of overlap: 12
Similarity score: 0.0480116

Alignment:
DGVBCABTGDWGCGKRRCSR
-------VDRTGCAATMCC-

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 3 Motif ID: 76 Motif name: E2F1

Original motif     Consensus sequence: TTTSGCGC Reverse complement motif     Consensus sequence: GCGCSAAA

Best Matches for Motif ID 76 (Highest to Lowest)

Dataset #: 3
Motif ID: 78
Motif name: Egr1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0

Alignment:
TTTSGCGC
TTTSGCGC

Original motif     Consensus sequence: TTTSGCGC Reverse complement motif     Consensus sequence: GCGCSAAA


Dataset #: 4
Motif ID: 143
Motif name: AgmAGAGGGCrscAGak
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0915396

Alignment:
AGMAGAGGGCASCAGAK
--------GCGCSAAA-

Original motif     Consensus sequence: AGMAGAGGGCASCAGAK Reverse complement motif     Consensus sequence: RTCTGSTGCCCTCTYCT


Dataset #: 4
Motif ID: 144
Motif name: ctCTrsyGCCmCCTast
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0943326

Alignment:
HDCTGSYGCCMCCTAST
-TTTSGCGC--------

Original motif     Consensus sequence: HDCTGSYGCCMCCTAST Reverse complement motif     Consensus sequence: ASTAGGYGGCMSCAGDD


Dataset #: 4
Motif ID: 167
Motif name: rsyAGrkGGCGCCmyCTrsy
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 9
Number of overlap: 8
Similarity score: 0.0955357

Alignment:
HSKAGKYGGCGCCRMCTMSD
--------GCGCSAAA----

Original motif     Consensus sequence: DSYAGRKGGCGCCMYCTRSH Reverse complement motif     Consensus sequence: HSKAGKYGGCGCCRMCTMSD


Dataset #: 4
Motif ID: 146
Motif name: myrGYGCCmCCTast
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0975521

Alignment:
ASTAGGYGGCGCTBB
----TTTSGCGC---

Original motif     Consensus sequence: VBAGCGCCMCCTAST Reverse complement motif     Consensus sequence: ASTAGGYGGCGCTBB


Dataset #: 3 Motif ID: 77 Motif name: EBF1

Original motif     Consensus sequence: MCCCMAGGGA Reverse complement motif     Consensus sequence: TCCCTYGGGY

Best Matches for Motif ID 77 (Highest to Lowest)

Dataset #: 3
Motif ID: 110
Motif name: PLAG1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 10
Similarity score: 0.0581959

Alignment:
CCCCCTTGGGCCCC
-TCCCTYGGGY---

Original motif     Consensus sequence: GGGGCCCAAGGGGG Reverse complement motif     Consensus sequence: CCCCCTTGGGCCCC


Dataset #: 3
Motif ID: 129
Motif name: Zfp423
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 10
Similarity score: 0.05861

Alignment:
GSMMCCYARGGKKKC
---MCCCMAGGGA--

Original motif     Consensus sequence: GSMMCCYARGGKKKC Reverse complement motif     Consensus sequence: GYRYCCMTKGGYRSC


Dataset #: 4
Motif ID: 166
Motif name: CasCAGrGGGCrsy
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 10
Similarity score: 0.0747791

Alignment:
BSKGCCCKCTGGTG
---TCCCTYGGGY-

Original motif     Consensus sequence: CACCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCKCTGGTG


Dataset #: 4
Motif ID: 168
Motif name: yrcrGYGCCMyCTGGtG
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 7
Number of overlap: 10
Similarity score: 0.076024

Alignment:
HVCAGCGCCCYCTGGTG
------TCCCTYGGGY-

Original motif     Consensus sequence: HVCAGCGCCCYCTGGTG Reverse complement motif     Consensus sequence: CACCAGMGGGCGCTGBD


Dataset #: 2
Motif ID: 67
Motif name: Motif 67
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.076343

Alignment:
SYGCCCYCTDSTGG
TCCCTYGGGY----

Original motif     Consensus sequence: SYGCCCYCTDSTGG Reverse complement motif     Consensus sequence: CCASHAGKGGGCKS


Dataset #: 3 Motif ID: 78 Motif name: Egr1

Original motif     Consensus sequence: TTTSGCGC Reverse complement motif     Consensus sequence: GCGCSAAA

Best Matches for Motif ID 78 (Highest to Lowest)

Dataset #: 3
Motif ID: 76
Motif name: E2F1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0

Alignment:
TTTSGCGC
TTTSGCGC

Original motif     Consensus sequence: TTTSGCGC Reverse complement motif     Consensus sequence: GCGCSAAA


Dataset #: 4
Motif ID: 143
Motif name: AgmAGAGGGCrscAGak
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0915396

Alignment:
AGMAGAGGGCASCAGAK
--------GCGCSAAA-

Original motif     Consensus sequence: AGMAGAGGGCASCAGAK Reverse complement motif     Consensus sequence: RTCTGSTGCCCTCTYCT


Dataset #: 4
Motif ID: 144
Motif name: ctCTrsyGCCmCCTast
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0943326

Alignment:
HDCTGSYGCCMCCTAST
-TTTSGCGC--------

Original motif     Consensus sequence: HDCTGSYGCCMCCTAST Reverse complement motif     Consensus sequence: ASTAGGYGGCMSCAGDD


Dataset #: 4
Motif ID: 167
Motif name: rsyAGrkGGCGCCmyCTrsy
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 9
Number of overlap: 8
Similarity score: 0.0955357

Alignment:
HSKAGKYGGCGCCRMCTMSD
--------GCGCSAAA----

Original motif     Consensus sequence: DSYAGRKGGCGCCMYCTRSH Reverse complement motif     Consensus sequence: HSKAGKYGGCGCCRMCTMSD


Dataset #: 4
Motif ID: 146
Motif name: myrGYGCCmCCTast
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0975521

Alignment:
ASTAGGYGGCGCTBB
----TTTSGCGC---

Original motif     Consensus sequence: VBAGCGCCMCCTAST Reverse complement motif     Consensus sequence: ASTAGGYGGCGCTBB


Dataset #: 3 Motif ID: 79 Motif name: ELK1

Original motif     Consensus sequence: VDDCCGGAAR Reverse complement motif     Consensus sequence: MTTCCGGHBV

Best Matches for Motif ID 79 (Highest to Lowest)

Dataset #: 3
Motif ID: 85
Motif name: Hand1Tcfe2a
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0406986

Alignment:
AWRCCAGAMB
VDDCCGGAAR

Original motif     Consensus sequence: BRTCTGGMWT Reverse complement motif     Consensus sequence: AWRCCAGAMB


Dataset #: 3
Motif ID: 119
Motif name: Stat3
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0421921

Alignment:
CTTCCTGGAA
MTTCCGGHBV

Original motif     Consensus sequence: TTCCAGGAAG Reverse complement motif     Consensus sequence: CTTCCTGGAA


Dataset #: 4
Motif ID: 151
Motif name: agrCCAGmAGrg
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0478168

Alignment:
HVGCCAGMAGRG
VDDCCGGAAR--

Original motif     Consensus sequence: HVGCCAGMAGRG Reverse complement motif     Consensus sequence: CKCTRCTGGCVH


Dataset #: 4
Motif ID: 156
Motif name: rgyGCCMyCTksTGGccd
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0493569

Alignment:
RVYGCCCYCTKSTGGCHD
--------MTTCCGGHBV

Original motif     Consensus sequence: RVYGCCCYCTKSTGGCHD Reverse complement motif     Consensus sequence: DDGCCASYAGMGGGCKVM


Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 10
Number of overlap: 10
Similarity score: 0.0506531

Alignment:
BMSMGCCYMCTKSTGGMHM
---------MTTCCGGHBV

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 3 Motif ID: 80 Motif name: ELK4

Original motif     Consensus sequence: ACCGGAAGT Reverse complement motif     Consensus sequence: ACTTCCGGT

Best Matches for Motif ID 80 (Highest to Lowest)

Dataset #: 4
Motif ID: 151
Motif name: agrCCAGmAGrg
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 9
Similarity score: 0.0699758

Alignment:
HVGCCAGMAGRG
--ACCGGAAGT-

Original motif     Consensus sequence: HVGCCAGMAGRG Reverse complement motif     Consensus sequence: CKCTRCTGGCVH


Dataset #: 4
Motif ID: 136
Motif name: dwCAGAAGwh
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 9
Similarity score: 0.0710473

Alignment:
DHCAGAAGDH
ACCGGAAGT-

Original motif     Consensus sequence: DHCAGAAGDH Reverse complement motif     Consensus sequence: HDCTTCTGHD


Dataset #: 3
Motif ID: 121
Motif name: TAL1TCF3
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 9
Similarity score: 0.0754906

Alignment:
HVAMCATCTGKT
---ACTTCCGGT

Original motif     Consensus sequence: HVAMCATCTGKT Reverse complement motif     Consensus sequence: ARCAGATGRTVD


Dataset #: 4
Motif ID: 166
Motif name: CasCAGrGGGCrsy
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 9
Similarity score: 0.0818647

Alignment:
BSKGCCCKCTGGTG
----ACTTCCGGT-

Original motif     Consensus sequence: CACCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCKCTGGTG


Dataset #: 4
Motif ID: 156
Motif name: rgyGCCMyCTksTGGccd
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 8
Number of overlap: 9
Similarity score: 0.0852431

Alignment:
RVYGCCCYCTKSTGGCHD
-------ACTTCCGGT--

Original motif     Consensus sequence: RVYGCCCYCTKSTGGCHD Reverse complement motif     Consensus sequence: DDGCCASYAGMGGGCKVM


Dataset #: 3 Motif ID: 81 Motif name: ESR1

Original motif     Consensus sequence: VDBHMAGGTCACCCTGACCY Reverse complement motif     Consensus sequence: MGGTCAGGGTGACCTRDBHV

Best Matches for Motif ID 81 (Highest to Lowest)

Dataset #: 3
Motif ID: 109
Motif name: Pax5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.0624908

Alignment:
MSGKKRCGCWDCABTGBBCD
MGGTCAGGGTGACCTRDBHV

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 4
Motif ID: 167
Motif name: rsyAGrkGGCGCCmyCTrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.0752066

Alignment:
DSYAGRKGGCGCCMYCTRSH
VDBHMAGGTCACCCTGACCY

Original motif     Consensus sequence: DSYAGRKGGCGCCMYCTRSH Reverse complement motif     Consensus sequence: HSKAGKYGGCGCCRMCTMSD


Dataset #: 3
Motif ID: 70
Motif name: Ar
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 19
Similarity score: 0.556363

Alignment:
-HWDAGHACRHHVTGTHCCHVMV
MGGTCAGGGTGACCTRDBHV---

Original motif     Consensus sequence: HWDAGHACRHHVTGTHCCHVMV Reverse complement motif     Consensus sequence: VRVDGGHACAVDDKGTHCTDWH


Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 19
Similarity score: 0.579928

Alignment:
-YDRCCASYAGRKGGCRSYV
MGGTCAGGGTGACCTRDBHV

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 3
Motif ID: 111
Motif name: PPARG
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 18
Similarity score: 1.01936

Alignment:
STAGGTCACBGTGACCYABT--
--MGGTCAGGGTGACCTRDBHV

Original motif     Consensus sequence: STAGGTCACBGTGACCYABT Reverse complement motif     Consensus sequence: ABTMGGTCACBGTGACCTAS


Dataset #: 3 Motif ID: 82 Motif name: ESR2

Original motif     Consensus sequence: VHRGGTCABDBTGMCCTB Reverse complement motif     Consensus sequence: BAGGYCABHBTGACCKHV

Best Matches for Motif ID 82 (Highest to Lowest)

Dataset #: 3
Motif ID: 111
Motif name: PPARG
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 18
Similarity score: 0.0125377

Alignment:
ABTMGGTCACBGTGACCTAS
--BAGGYCABHBTGACCKHV

Original motif     Consensus sequence: STAGGTCACBGTGACCYABT Reverse complement motif     Consensus sequence: ABTMGGTCACBGTGACCTAS


Dataset #: 3
Motif ID: 70
Motif name: Ar
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 18
Similarity score: 0.0399216

Alignment:
HWDAGHACRHHVTGTHCCHVMV
--BAGGYCABHBTGACCKHV--

Original motif     Consensus sequence: HWDAGHACRHHVTGTHCCHVMV Reverse complement motif     Consensus sequence: VRVDGGHACAVDDKGTHCTDWH


Dataset #: 3
Motif ID: 131
Motif name: znf143
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 18
Similarity score: 0.0692215

Alignment:
GCMWRGCATYRTGGGAMHTB
-BAGGYCABHBTGACCKHV-

Original motif     Consensus sequence: BAHYTCCCAKMATGCMWYGC Reverse complement motif     Consensus sequence: GCMWRGCATYRTGGGAMHTB


Dataset #: 3
Motif ID: 109
Motif name: Pax5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 18
Similarity score: 0.0761757

Alignment:
MSGKKRCGCWDCABTGBBCD
BAGGYCABHBTGACCKHV--

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 4
Motif ID: 167
Motif name: rsyAGrkGGCGCCmyCTrsy
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 18
Similarity score: 0.0808384

Alignment:
HSKAGKYGGCGCCRMCTMSD
VHRGGTCABDBTGMCCTB--

Original motif     Consensus sequence: DSYAGRKGGCGCCMYCTRSH Reverse complement motif     Consensus sequence: HSKAGKYGGCGCCRMCTMSD


Dataset #: 3 Motif ID: 83 Motif name: Esrrb

Original motif     Consensus sequence: VBBYCAAGGTCA Reverse complement motif     Consensus sequence: TGACCTTGMBBB

Best Matches for Motif ID 83 (Highest to Lowest)

Dataset #: 3
Motif ID: 107
Motif name: NR2F1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.0442611

Alignment:
AKGYYCAAAGRTCA
--VBBYCAAGGTCA

Original motif     Consensus sequence: TGAMCTTTGMMCYT Reverse complement motif     Consensus sequence: AKGYYCAAAGRTCA


Dataset #: 3
Motif ID: 115
Motif name: RXRRAR_DR5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.0442659

Alignment:
TGACCTCKVVBTGAYCK
TGACCTTGMBBB-----

Original motif     Consensus sequence: RGKTCABVVRGAGGTCA Reverse complement motif     Consensus sequence: TGACCTCKVVBTGAYCK


Dataset #: 3
Motif ID: 87
Motif name: HNF4A
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.0470808

Alignment:
RGGBCAAAGKYCA
-VBBYCAAGGTCA

Original motif     Consensus sequence: RGGBCAAAGKYCA Reverse complement motif     Consensus sequence: TGMYCTTTGBCCK


Dataset #: 3
Motif ID: 130
Motif name: Zfx
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 12
Similarity score: 0.0625961

Alignment:
VAGGCCBBGGCVBB
-TGACCTTGMBBB-

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB


Dataset #: 3
Motif ID: 81
Motif name: ESR1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 9
Number of overlap: 12
Similarity score: 0.0628484

Alignment:
VDBHMAGGTCACCCTGACCY
TGACCTTGMBBB--------

Original motif     Consensus sequence: VDBHMAGGTCACCCTGACCY Reverse complement motif     Consensus sequence: MGGTCAGGGTGACCTRDBHV


Dataset #: 3 Motif ID: 84 Motif name: GABPA

Original motif     Consensus sequence: CCGGAAGTGVV Reverse complement motif     Consensus sequence: VVCACTTCCGG

Best Matches for Motif ID 84 (Highest to Lowest)

Dataset #: 4
Motif ID: 154
Motif name: csCsCCTCCcc
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0708637

Alignment:
VBCCCCTCCHB
VVCACTTCCGG

Original motif     Consensus sequence: VBCCCCTCCHB Reverse complement motif     Consensus sequence: BDGGAGGGGBV


Dataset #: 4
Motif ID: 169
Motif name: yvTGCyGCCmCCwGgtG
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 7
Number of overlap: 11
Similarity score: 0.0756694

Alignment:
CDCCWGGTGGCAGCAVV
------CCGGAAGTGVV

Original motif     Consensus sequence: BVTGCTGCCACCWGGDG Reverse complement motif     Consensus sequence: CDCCWGGTGGCAGCAVV


Dataset #: 2
Motif ID: 67
Motif name: Motif 67
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 11
Similarity score: 0.0810917

Alignment:
SYGCCCYCTDSTGG
VVCACTTCCGG---

Original motif     Consensus sequence: SYGCCCYCTDSTGG Reverse complement motif     Consensus sequence: CCASHAGKGGGCKS


Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 11
Similarity score: 0.0813947

Alignment:
BMSMGCCYMCTKSTGGMHM
-----VVCACTTCCGG---

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 4
Motif ID: 156
Motif name: rgyGCCMyCTksTGGccd
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 11
Similarity score: 0.0837237

Alignment:
RVYGCCCYCTKSTGGCHD
----VVCACTTCCGG---

Original motif     Consensus sequence: RVYGCCCYCTKSTGGCHD Reverse complement motif     Consensus sequence: DDGCCASYAGMGGGCKVM


Dataset #: 3 Motif ID: 85 Motif name: Hand1Tcfe2a

Original motif     Consensus sequence: BRTCTGGMWT Reverse complement motif     Consensus sequence: AWRCCAGAMB

Best Matches for Motif ID 85 (Highest to Lowest)

Dataset #: 4
Motif ID: 151
Motif name: agrCCAGmAGrg
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 10
Similarity score: 0.0194367

Alignment:
HVGCCAGMAGRG
AWRCCAGAMB--

Original motif     Consensus sequence: HVGCCAGMAGRG Reverse complement motif     Consensus sequence: CKCTRCTGGCVH


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.027647

Alignment:
VHGGCCAGMAGAGGGCRBY
-AWRCCAGAMB--------

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 3
Motif ID: 79
Motif name: ELK1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0297824

Alignment:
MTTCCGGHBV
BRTCTGGMWT

Original motif     Consensus sequence: VDDCCGGAAR Reverse complement motif     Consensus sequence: MTTCCGGHBV


Dataset #: 3
Motif ID: 114
Motif name: RUNX1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.0323511

Alignment:
BBYTGTGGTTT
-BRTCTGGMWT

Original motif     Consensus sequence: BBYTGTGGTTT Reverse complement motif     Consensus sequence: AAACCACAKVB


Dataset #: 4
Motif ID: 156
Motif name: rgyGCCMyCTksTGGccd
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 9
Number of overlap: 10
Similarity score: 0.0371584

Alignment:
RVYGCCCYCTKSTGGCHD
--------BRTCTGGMWT

Original motif     Consensus sequence: RVYGCCCYCTKSTGGCHD Reverse complement motif     Consensus sequence: DDGCCASYAGMGGGCKVM


Dataset #: 3 Motif ID: 86 Motif name: HIF1AARNT

Original motif     Consensus sequence: VBACGTGV Reverse complement motif     Consensus sequence: VCACGTBV

Best Matches for Motif ID 86 (Highest to Lowest)

Dataset #: 3
Motif ID: 91
Motif name: MAX
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0166242

Alignment:
BCACGTGDTD
VCACGTBV--

Original motif     Consensus sequence: DAHCACGTGD Reverse complement motif     Consensus sequence: BCACGTGDTD


Dataset #: 3
Motif ID: 96
Motif name: Mycn
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0228069

Alignment:
GCCACGTGSD
-VBACGTGV-

Original motif     Consensus sequence: HSCACGTGGC Reverse complement motif     Consensus sequence: GCCACGTGSD


Dataset #: 3
Motif ID: 94
Motif name: Myc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0249459

Alignment:
DCCACGTGCV
-VBACGTGV-

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV


Dataset #: 3
Motif ID: 95
Motif name: MYCMAX
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0254922

Alignment:
ACCACGTGSTM
-VCACGTBV--

Original motif     Consensus sequence: RASCACGTGGT Reverse complement motif     Consensus sequence: ACCACGTGSTM


Dataset #: 3
Motif ID: 125
Motif name: TP53
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 11
Number of overlap: 8
Similarity score: 0.0362969

Alignment:
MSGGACATGYCCGGGCATGT
--VBACGTGV----------

Original motif     Consensus sequence: MSGGACATGYCCGGGCATGT Reverse complement motif     Consensus sequence: ACATGCCCGGKCATGTCCSR


Dataset #: 3 Motif ID: 87 Motif name: HNF4A

Original motif     Consensus sequence: RGGBCAAAGKYCA Reverse complement motif     Consensus sequence: TGMYCTTTGBCCK

Best Matches for Motif ID 87 (Highest to Lowest)

Dataset #: 3
Motif ID: 107
Motif name: NR2F1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 13
Similarity score: 0.0127044

Alignment:
AKGYYCAAAGRTCA
-RGGBCAAAGKYCA

Original motif     Consensus sequence: TGAMCTTTGMMCYT Reverse complement motif     Consensus sequence: AKGYYCAAAGRTCA


Dataset #: 3
Motif ID: 115
Motif name: RXRRAR_DR5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 13
Similarity score: 0.0388151

Alignment:
TGACCTCKVVBTGAYCK
TGMYCTTTGBCCK----

Original motif     Consensus sequence: RGKTCABVVRGAGGTCA Reverse complement motif     Consensus sequence: TGACCTCKVVBTGAYCK


Dataset #: 3
Motif ID: 109
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 8
Number of overlap: 13
Similarity score: 0.0538871

Alignment:
MSGKKRCGCWDCABTGBBCD
-------RGGBCAAAGKYCA

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 3
Motif ID: 82
Motif name: ESR2
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 13
Similarity score: 0.0571246

Alignment:
VHRGGTCABDBTGMCCTB
--RGGBCAAAGKYCA---

Original motif     Consensus sequence: VHRGGTCABDBTGMCCTB Reverse complement motif     Consensus sequence: BAGGYCABHBTGACCKHV


Dataset #: 3
Motif ID: 70
Motif name: Ar
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 13
Similarity score: 0.0577381

Alignment:
VRVDGGHACAVDDKGTHCTDWH
------TGMYCTTTGBCCK---

Original motif     Consensus sequence: HWDAGHACRHHVTGTHCCHVMV Reverse complement motif     Consensus sequence: VRVDGGHACAVDDKGTHCTDWH


Dataset #: 3 Motif ID: 88 Motif name: INSM1

Original motif     Consensus sequence: TGYCAGGGGGCR Reverse complement motif     Consensus sequence: MGCCCCCTGMCA

Best Matches for Motif ID 88 (Highest to Lowest)

Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 5
Number of overlap: 12
Similarity score: 0.0323447

Alignment:
BMSMGCCYMCTKSTGGMHM
---MGCCCCCTGMCA----

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 2
Motif ID: 67
Motif name: Motif 67
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 12
Similarity score: 0.0361443

Alignment:
CCASHAGKGGGCKS
-TGYCAGGGGGCR-

Original motif     Consensus sequence: SYGCCCYCTDSTGG Reverse complement motif     Consensus sequence: CCASHAGKGGGCKS


Dataset #: 4
Motif ID: 166
Motif name: CasCAGrGGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 12
Similarity score: 0.0386733

Alignment:
CACCAGRGGGCRSB
TGYCAGGGGGCR--

Original motif     Consensus sequence: CACCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCKCTGGTG


Dataset #: 4
Motif ID: 168
Motif name: yrcrGYGCCMyCTGGtG
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.0393748

Alignment:
HVCAGCGCCCYCTGGTG
-----MGCCCCCTGMCA

Original motif     Consensus sequence: HVCAGCGCCCYCTGGTG Reverse complement motif     Consensus sequence: CACCAGMGGGCGCTGBD


Dataset #: 4
Motif ID: 156
Motif name: rgyGCCMyCTksTGGccd
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 12
Similarity score: 0.0427424

Alignment:
RVYGCCCYCTKSTGGCHD
--MGCCCCCTGMCA----

Original motif     Consensus sequence: RVYGCCCYCTKSTGGCHD Reverse complement motif     Consensus sequence: DDGCCASYAGMGGGCKVM


Dataset #: 3 Motif ID: 89 Motif name: Klf4

Original motif     Consensus sequence: DGGGYGKGGC Reverse complement motif     Consensus sequence: GCCYCMCCCD

Best Matches for Motif ID 89 (Highest to Lowest)

Dataset #: 4
Motif ID: 155
Motif name: csCSCCdCCCcs
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.0234217

Alignment:
VDGGGDGGGGBV
-DGGGYGKGGC-

Original motif     Consensus sequence: VBCCCCDCCCHV Reverse complement motif     Consensus sequence: VDGGGDGGGGBV


Dataset #: 4
Motif ID: 154
Motif name: csCsCCTCCcc
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0429499

Alignment:
VBCCCCTCCHB
-GCCYCMCCCD

Original motif     Consensus sequence: VBCCCCTCCHB Reverse complement motif     Consensus sequence: BDGGAGGGGBV


Dataset #: 4
Motif ID: 149
Motif name: asmAGRGGGCrCTGsmkc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 10
Similarity score: 0.0512984

Alignment:
ASMAGAGGGCRCTGSABH
-----DGGGYGKGGC---

Original motif     Consensus sequence: ASMAGAGGGCRCTGSABH Reverse complement motif     Consensus sequence: DBTSCAGMGCCCTCTRST


Dataset #: 4
Motif ID: 146
Motif name: myrGYGCCmCCTast
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 10
Similarity score: 0.0522764

Alignment:
VBAGCGCCMCCTAST
---GCCYCMCCCD--

Original motif     Consensus sequence: VBAGCGCCMCCTAST Reverse complement motif     Consensus sequence: ASTAGGYGGCGCTBB


Dataset #: 4
Motif ID: 169
Motif name: yvTGCyGCCmCCwGgtG
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 10
Similarity score: 0.0619219

Alignment:
BVTGCTGCCACCWGGDG
---GCCYCMCCCD----

Original motif     Consensus sequence: BVTGCTGCCACCWGGDG Reverse complement motif     Consensus sequence: CDCCWGGTGGCAGCAVV


Dataset #: 3 Motif ID: 90 Motif name: Mafb

Original motif     Consensus sequence: GCTGACDB Reverse complement motif     Consensus sequence: BHGTCAGC

Best Matches for Motif ID 90 (Highest to Lowest)

Dataset #: 4
Motif ID: 149
Motif name: asmAGRGGGCrCTGsmkc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0232655

Alignment:
ASMAGAGGGCRCTGSABH
----------GCTGACDB

Original motif     Consensus sequence: ASMAGAGGGCRCTGSABH Reverse complement motif     Consensus sequence: DBTSCAGMGCCCTCTRST


Dataset #: 3
Motif ID: 111
Motif name: PPARG
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 10
Number of overlap: 8
Similarity score: 0.0322069

Alignment:
STAGGTCACBGTGACCYABT
---GCTGACDB---------

Original motif     Consensus sequence: STAGGTCACBGTGACCYABT Reverse complement motif     Consensus sequence: ABTMGGTCACBGTGACCTAS


Dataset #: 3
Motif ID: 82
Motif name: ESR2
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.035275

Alignment:
BAGGYCABHBTGACCKHV
--------GCTGACDB--

Original motif     Consensus sequence: VHRGGTCABDBTGMCCTB Reverse complement motif     Consensus sequence: BAGGYCABHBTGACCKHV


Dataset #: 4
Motif ID: 169
Motif name: yvTGCyGCCmCCwGgtG
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 7
Number of overlap: 8
Similarity score: 0.0358393

Alignment:
CDCCWGGTGGCAGCAVV
------BHGTCAGC---

Original motif     Consensus sequence: BVTGCTGCCACCWGGDG Reverse complement motif     Consensus sequence: CDCCWGGTGGCAGCAVV


Dataset #: 3
Motif ID: 115
Motif name: RXRRAR_DR5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0388936

Alignment:
RGKTCABVVRGAGGTCA
-GCTGACDB--------

Original motif     Consensus sequence: RGKTCABVVRGAGGTCA Reverse complement motif     Consensus sequence: TGACCTCKVVBTGAYCK


Dataset #: 3 Motif ID: 91 Motif name: MAX

Original motif     Consensus sequence: DAHCACGTGD Reverse complement motif     Consensus sequence: BCACGTGDTD

Best Matches for Motif ID 91 (Highest to Lowest)

Dataset #: 3
Motif ID: 95
Motif name: MYCMAX
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0266106

Alignment:
RASCACGTGGT
DAHCACGTGD-

Original motif     Consensus sequence: RASCACGTGGT Reverse complement motif     Consensus sequence: ACCACGTGSTM


Dataset #: 3
Motif ID: 121
Motif name: TAL1TCF3
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.0735692

Alignment:
ARCAGATGRTVD
-BCACGTGDTD-

Original motif     Consensus sequence: HVAMCATCTGKT Reverse complement motif     Consensus sequence: ARCAGATGRTVD


Dataset #: 4
Motif ID: 158
Motif name: grCCACwAGrk
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.0740659

Alignment:
DDCCACWAGRK
DAHCACGTGD-

Original motif     Consensus sequence: DDCCACWAGRK Reverse complement motif     Consensus sequence: YMCTWGTGGHH


Dataset #: 4
Motif ID: 138
Motif name: grCCACyAGAkG
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0824309

Alignment:
DDCCACYAGAKG
DAHCACGTGD--

Original motif     Consensus sequence: DDCCACYAGAKG Reverse complement motif     Consensus sequence: CYTCTMGTGGHH


Dataset #: 3
Motif ID: 105
Motif name: NHLH1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0853797

Alignment:
VCGCAGCTGCGB
--BCACGTGDTD

Original motif     Consensus sequence: VCGCAGCTGCGB Reverse complement motif     Consensus sequence: VCGCAGCTGCGV


Dataset #: 3 Motif ID: 92 Motif name: MIZF

Original motif     Consensus sequence: BAACGTCCGC Reverse complement motif     Consensus sequence: GCGGACGTTV

Best Matches for Motif ID 92 (Highest to Lowest)

Dataset #: 3
Motif ID: 84
Motif name: GABPA
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0326212

Alignment:
VVCACTTCCGG
BAACGTCCGC-

Original motif     Consensus sequence: CCGGAAGTGVV Reverse complement motif     Consensus sequence: VVCACTTCCGG


Dataset #: 4
Motif ID: 168
Motif name: yrcrGYGCCMyCTGGtG
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 6
Number of overlap: 10
Similarity score: 0.0553693

Alignment:
CACCAGMGGGCGCTGBD
-----GCGGACGTTV--

Original motif     Consensus sequence: HVCAGCGCCCYCTGGTG Reverse complement motif     Consensus sequence: CACCAGMGGGCGCTGBD


Dataset #: 4
Motif ID: 149
Motif name: asmAGRGGGCrCTGsmkc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 10
Similarity score: 0.0554206

Alignment:
DBTSCAGMGCCCTCTRST
----BAACGTCCGC----

Original motif     Consensus sequence: ASMAGAGGGCRCTGSABH Reverse complement motif     Consensus sequence: DBTSCAGMGCCCTCTRST


Dataset #: 3
Motif ID: 95
Motif name: MYCMAX
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.0558866

Alignment:
ACCACGTGSTM
-BAACGTCCGC

Original motif     Consensus sequence: RASCACGTGGT Reverse complement motif     Consensus sequence: ACCACGTGSTM


Dataset #: 3
Motif ID: 82
Motif name: ESR2
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0567619

Alignment:
BAGGYCABHBTGACCKHV
--------GCGGACGTTV

Original motif     Consensus sequence: VHRGGTCABDBTGMCCTB Reverse complement motif     Consensus sequence: BAGGYCABHBTGACCKHV


Dataset #: 3 Motif ID: 93 Motif name: Myb

Original motif     Consensus sequence: GRCVGTTG Reverse complement motif     Consensus sequence: CAACVGMC

Best Matches for Motif ID 93 (Highest to Lowest)

Dataset #: 3
Motif ID: 97
Motif name: Myf
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0229626

Alignment:
MRGCARCWGSWG
---CAACVGMC-

Original motif     Consensus sequence: MRGCARCWGSWG Reverse complement motif     Consensus sequence: CWSCWGMTGCKR


Dataset #: 3
Motif ID: 87
Motif name: HNF4A
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 8
Similarity score: 0.0239903

Alignment:
RGGBCAAAGKYCA
-CAACVGMC----

Original motif     Consensus sequence: RGGBCAAAGKYCA Reverse complement motif     Consensus sequence: TGMYCTTTGBCCK


Dataset #: 3
Motif ID: 121
Motif name: TAL1TCF3
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0259637

Alignment:
ARCAGATGRTVD
GRCVGTTG----

Original motif     Consensus sequence: HVAMCATCTGKT Reverse complement motif     Consensus sequence: ARCAGATGRTVD


Dataset #: 3
Motif ID: 114
Motif name: RUNX1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0297264

Alignment:
AAACCACAKVB
---CAACVGMC

Original motif     Consensus sequence: BBYTGTGGTTT Reverse complement motif     Consensus sequence: AAACCACAKVB


Dataset #: 3
Motif ID: 104
Motif name: NFYA
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0310894

Alignment:
VBBRRCCAATSRGVDB
------CAACVGMC--

Original motif     Consensus sequence: VBBRRCCAATSRGVDB Reverse complement motif     Consensus sequence: BHVCKSATTGGMKBVV


Dataset #: 3 Motif ID: 94 Motif name: Myc

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV

Best Matches for Motif ID 94 (Highest to Lowest)

Dataset #: 3
Motif ID: 96
Motif name: Mycn
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0

Alignment:
HSCACGTGGC
VGCACGTGGH

Original motif     Consensus sequence: HSCACGTGGC Reverse complement motif     Consensus sequence: GCCACGTGSD


Dataset #: 3
Motif ID: 95
Motif name: MYCMAX
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0209359

Alignment:
RASCACGTGGT
-VGCACGTGGH

Original motif     Consensus sequence: RASCACGTGGT Reverse complement motif     Consensus sequence: ACCACGTGSTM


Dataset #: 4
Motif ID: 169
Motif name: yvTGCyGCCmCCwGgtG
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 7
Number of overlap: 10
Similarity score: 0.0628757

Alignment:
CDCCWGGTGGCAGCAVV
-VGCACGTGGH------

Original motif     Consensus sequence: BVTGCTGCCACCWGGDG Reverse complement motif     Consensus sequence: CDCCWGGTGGCAGCAVV


Dataset #: 4
Motif ID: 147
Motif name: asCAGrkGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0675017

Alignment:
ASCAGRGGGCRSB
VGCACGTGGH---

Original motif     Consensus sequence: ASCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCMCTGST


Dataset #: 4
Motif ID: 158
Motif name: grCCACwAGrk
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.0682475

Alignment:
DDCCACWAGRK
-DCCACGTGCV

Original motif     Consensus sequence: DDCCACWAGRK Reverse complement motif     Consensus sequence: YMCTWGTGGHH


Dataset #: 3 Motif ID: 95 Motif name: MYCMAX

Original motif     Consensus sequence: RASCACGTGGT Reverse complement motif     Consensus sequence: ACCACGTGSTM

Best Matches for Motif ID 95 (Highest to Lowest)

Dataset #: 3
Motif ID: 121
Motif name: TAL1TCF3
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0652343

Alignment:
HVAMCATCTGKT
-RASCACGTGGT

Original motif     Consensus sequence: HVAMCATCTGKT Reverse complement motif     Consensus sequence: ARCAGATGRTVD


Dataset #: 4
Motif ID: 158
Motif name: grCCACwAGrk
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0786918

Alignment:
DDCCACWAGRK
RASCACGTGGT

Original motif     Consensus sequence: DDCCACWAGRK Reverse complement motif     Consensus sequence: YMCTWGTGGHH


Dataset #: 4
Motif ID: 169
Motif name: yvTGCyGCCmCCwGgtG
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 7
Number of overlap: 11
Similarity score: 0.0804522

Alignment:
CDCCWGGTGGCAGCAVV
RASCACGTGGT------

Original motif     Consensus sequence: BVTGCTGCCACCWGGDG Reverse complement motif     Consensus sequence: CDCCWGGTGGCAGCAVV


Dataset #: 3
Motif ID: 97
Motif name: Myf
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.0843705

Alignment:
CWSCWGMTGCKR
-ACCACGTGSTM

Original motif     Consensus sequence: MRGCARCWGSWG Reverse complement motif     Consensus sequence: CWSCWGMTGCKR


Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 11
Similarity score: 0.084904

Alignment:
YDRCCASYAGRKGGCRSYV
----RASCACGTGGT----

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 3 Motif ID: 96 Motif name: Mycn

Original motif     Consensus sequence: HSCACGTGGC Reverse complement motif     Consensus sequence: GCCACGTGSD

Best Matches for Motif ID 96 (Highest to Lowest)

Dataset #: 3
Motif ID: 94
Motif name: Myc
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0

Alignment:
DCCACGTGCV
GCCACGTGSD

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV


Dataset #: 3
Motif ID: 95
Motif name: MYCMAX
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.0200467

Alignment:
RASCACGTGGT
-HSCACGTGGC

Original motif     Consensus sequence: RASCACGTGGT Reverse complement motif     Consensus sequence: ACCACGTGSTM


Dataset #: 4
Motif ID: 169
Motif name: yvTGCyGCCmCCwGgtG
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.0581322

Alignment:
CDCCWGGTGGCAGCAVV
-HSCACGTGGC------

Original motif     Consensus sequence: BVTGCTGCCACCWGGDG Reverse complement motif     Consensus sequence: CDCCWGGTGGCAGCAVV


Dataset #: 4
Motif ID: 147
Motif name: asCAGrkGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0621075

Alignment:
ASCAGRGGGCRSB
HSCACGTGGC---

Original motif     Consensus sequence: ASCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCMCTGST


Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 6
Number of overlap: 10
Similarity score: 0.0679017

Alignment:
YDRCCASYAGRKGGCRSYV
-----HSCACGTGGC----

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 3 Motif ID: 97 Motif name: Myf

Original motif     Consensus sequence: MRGCARCWGSWG Reverse complement motif     Consensus sequence: CWSCWGMTGCKR

Best Matches for Motif ID 97 (Highest to Lowest)

Dataset #: 3
Motif ID: 105
Motif name: NHLH1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.0355504

Alignment:
VCGCAGCTGCGV
CWSCWGMTGCKR

Original motif     Consensus sequence: VCGCAGCTGCGB Reverse complement motif     Consensus sequence: VCGCAGCTGCGV


Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 12
Similarity score: 0.0508517

Alignment:
YDRCCASYAGRKGGCRSYV
---CWSCWGMTGCKR----

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 4
Motif ID: 166
Motif name: CasCAGrGGGCrsy
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.055783

Alignment:
CACCAGRGGGCRSB
CWSCWGMTGCKR--

Original motif     Consensus sequence: CACCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCKCTGGTG


Dataset #: 4
Motif ID: 156
Motif name: rgyGCCMyCTksTGGccd
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 12
Similarity score: 0.058463

Alignment:
DDGCCASYAGMGGGCKVM
----CWSCWGMTGCKR--

Original motif     Consensus sequence: RVYGCCCYCTKSTGGCHD Reverse complement motif     Consensus sequence: DDGCCASYAGMGGGCKVM


Dataset #: 2
Motif ID: 69
Motif name: Motif 69
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 12
Similarity score: 0.0591644

Alignment:
CCTGGARCTGGAGT
-MRGCARCWGSWG-

Original motif     Consensus sequence: CCTGGARCTGGAGT Reverse complement motif     Consensus sequence: ACTCCAGMTCCAGG


Dataset #: 3 Motif ID: 98 Motif name: MZF1_1-4

Original motif     Consensus sequence: BGGGGA Reverse complement motif     Consensus sequence: TCCCCV

Best Matches for Motif ID 98 (Highest to Lowest)

Dataset #: 3
Motif ID: 88
Motif name: INSM1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 5
Number of overlap: 6
Similarity score: 0.033712

Alignment:
MGCCCCCTGMCA
--TCCCCV----

Original motif     Consensus sequence: TGYCAGGGGGCR Reverse complement motif     Consensus sequence: MGCCCCCTGMCA


Dataset #: 3
Motif ID: 77
Motif name: EBF1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 6
Similarity score: 0.0339898

Alignment:
MCCCMAGGGA
----BGGGGA

Original motif     Consensus sequence: MCCCMAGGGA Reverse complement motif     Consensus sequence: TCCCTYGGGY


Dataset #: 4
Motif ID: 155
Motif name: csCSCCdCCCcs
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.0344568

Alignment:
VBCCCCDCCCHV
------TCCCCV

Original motif     Consensus sequence: VBCCCCDCCCHV Reverse complement motif     Consensus sequence: VDGGGDGGGGBV


Dataset #: 3
Motif ID: 99
Motif name: MZF1_5-13
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 6
Similarity score: 0.0375315

Alignment:
BKAGGGGDAD
---BGGGGA-

Original motif     Consensus sequence: BKAGGGGDAD Reverse complement motif     Consensus sequence: BTHCCCCTYB


Dataset #: 4
Motif ID: 162
Motif name: ccAsCCCCAcc
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 6
Similarity score: 0.0465466

Alignment:
HVASCCCCABH
---TCCCCV--

Original motif     Consensus sequence: HVASCCCCABH Reverse complement motif     Consensus sequence: DBTGGGGSTVD


Dataset #: 3 Motif ID: 99 Motif name: MZF1_5-13

Original motif     Consensus sequence: BKAGGGGDAD Reverse complement motif     Consensus sequence: BTHCCCCTYB

Best Matches for Motif ID 99 (Highest to Lowest)

Dataset #: 3
Motif ID: 88
Motif name: INSM1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 10
Similarity score: 0.0360532

Alignment:
TGYCAGGGGGCR
--BKAGGGGDAD

Original motif     Consensus sequence: TGYCAGGGGGCR Reverse complement motif     Consensus sequence: MGCCCCCTGMCA


Dataset #: 4
Motif ID: 143
Motif name: AgmAGAGGGCrscAGak
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.0361803

Alignment:
RTCTGSTGCCCTCTYCT
------BTHCCCCTYB-

Original motif     Consensus sequence: AGMAGAGGGCASCAGAK Reverse complement motif     Consensus sequence: RTCTGSTGCCCTCTYCT


Dataset #: 3
Motif ID: 131
Motif name: znf143
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 10
Similarity score: 0.0377199

Alignment:
GCMWRGCATYRTGGGAMHTB
--------BKAGGGGDAD--

Original motif     Consensus sequence: BAHYTCCCAKMATGCMWYGC Reverse complement motif     Consensus sequence: GCMWRGCATYRTGGGAMHTB


Dataset #: 2
Motif ID: 67
Motif name: Motif 67
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.0386182

Alignment:
CCASHAGKGGGCKS
-BKAGGGGDAD---

Original motif     Consensus sequence: SYGCCCYCTDSTGG Reverse complement motif     Consensus sequence: CCASHAGKGGGCKS


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 10
Similarity score: 0.0397537

Alignment:
KBKGCCCTCTYCTGGCCHV
--BTHCCCCTYB-------

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 3 Motif ID: 100 Motif name: NFE2L2

Original motif     Consensus sequence: RTGACWHAGCA Reverse complement motif     Consensus sequence: TGCTDWGTCAK

Best Matches for Motif ID 100 (Highest to Lowest)

Dataset #: 3
Motif ID: 125
Motif name: TP53
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 11
Similarity score: 0.0588881

Alignment:
ACATGCCCGGKCATGTCCSR
---TGCTDWGTCAK------

Original motif     Consensus sequence: MSGGACATGYCCGGGCATGT Reverse complement motif     Consensus sequence: ACATGCCCGGKCATGTCCSR


Dataset #: 3
Motif ID: 81
Motif name: ESR1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.0627853

Alignment:
VDBHMAGGTCACCCTGACCY
--------TGCTDWGTCAK-

Original motif     Consensus sequence: VDBHMAGGTCACCCTGACCY Reverse complement motif     Consensus sequence: MGGTCAGGGTGACCTRDBHV


Dataset #: 4
Motif ID: 170
Motif name: ssGGCrsTGCrs
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0672435

Alignment:
VVGGCRSTGCVB
RTGACWHAGCA-

Original motif     Consensus sequence: VVGGCRSTGCVB Reverse complement motif     Consensus sequence: BVGCASMGCCVV


Dataset #: 4
Motif ID: 149
Motif name: asmAGRGGGCrCTGsmkc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 6
Number of overlap: 11
Similarity score: 0.070397

Alignment:
ASMAGAGGGCRCTGSABH
-----RTGACWHAGCA--

Original motif     Consensus sequence: ASMAGAGGGCRCTGSABH Reverse complement motif     Consensus sequence: DBTSCAGMGCCCTCTRST


Dataset #: 3
Motif ID: 109
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 11
Similarity score: 0.0725913

Alignment:
MSGKKRCGCWDCABTGBBCD
--RTGACWHAGCA-------

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 3 Motif ID: 101 Motif name: NFIC

Original motif     Consensus sequence: TTGGCD Reverse complement motif     Consensus sequence: DGCCAA

Best Matches for Motif ID 101 (Highest to Lowest)

Dataset #: 3
Motif ID: 124
Motif name: TLX1NFIC
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0

Alignment:
TTGGCHDBSTGCCA
TTGGCD--------

Original motif     Consensus sequence: TGGCASBDHGCCAA Reverse complement motif     Consensus sequence: TTGGCHDBSTGCCA


Dataset #: 3
Motif ID: 104
Motif name: NFYA
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 6
Similarity score: 0.020508

Alignment:
VBBRRCCAATSRGVDB
---DGCCAA-------

Original motif     Consensus sequence: VBBRRCCAATSRGVDB Reverse complement motif     Consensus sequence: BHVCKSATTGGMKBVV


Dataset #: 4
Motif ID: 165
Motif name: wgGCCAshAGrGGGCrsy
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 12
Number of overlap: 6
Similarity score: 0.0215379

Alignment:
HDGCCACHAGRGGGCRBY
-DGCCAA-----------

Original motif     Consensus sequence: HDGCCACHAGRGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCKCTHGTGGCHH


Dataset #: 4
Motif ID: 156
Motif name: rgyGCCMyCTksTGGccd
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.026631

Alignment:
DDGCCASYAGMGGGCKVM
-DGCCAA-----------

Original motif     Consensus sequence: RVYGCCCYCTKSTGGCHD Reverse complement motif     Consensus sequence: DDGCCASYAGMGGGCKVM


Dataset #: 4
Motif ID: 151
Motif name: agrCCAGmAGrg
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.0273632

Alignment:
CKCTRCTGGCVH
-----TTGGCD-

Original motif     Consensus sequence: HVGCCAGMAGRG Reverse complement motif     Consensus sequence: CKCTRCTGGCVH


Dataset #: 3 Motif ID: 102 Motif name: NF-kappaB

Original motif     Consensus sequence: GGGRMTTYCC Reverse complement motif     Consensus sequence: GGMAAYKCCC

Best Matches for Motif ID 102 (Highest to Lowest)

Dataset #: 3
Motif ID: 112
Motif name: RELA
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0219591

Alignment:
GGGRATTTCC
GGGRMTTYCC

Original motif     Consensus sequence: GGGRATTTCC Reverse complement motif     Consensus sequence: GGAAATKCCC


Dataset #: 3
Motif ID: 103
Motif name: NFKB1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0264912

Alignment:
GGGGRTTCCCC
GGGRMTTYCC-

Original motif     Consensus sequence: GGGGRTTCCCC Reverse complement motif     Consensus sequence: GGGGAAKCCCC


Dataset #: 3
Motif ID: 125
Motif name: TP53
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 9
Number of overlap: 10
Similarity score: 0.0780263

Alignment:
MSGGACATGYCCGGGCATGT
--GGMAAYKCCC--------

Original motif     Consensus sequence: MSGGACATGYCCGGGCATGT Reverse complement motif     Consensus sequence: ACATGCCCGGKCATGTCCSR


Dataset #: 4
Motif ID: 149
Motif name: asmAGRGGGCrCTGsmkc
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 7
Number of overlap: 10
Similarity score: 0.078539

Alignment:
DBTSCAGMGCCCTCTRST
--GGMAAYKCCC------

Original motif     Consensus sequence: ASMAGAGGGCRCTGSABH Reverse complement motif     Consensus sequence: DBTSCAGMGCCCTCTRST


Dataset #: 3
Motif ID: 124
Motif name: TLX1NFIC
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.0847697

Alignment:
TGGCASBDHGCCAA
-GGMAAYKCCC---

Original motif     Consensus sequence: TGGCASBDHGCCAA Reverse complement motif     Consensus sequence: TTGGCHDBSTGCCA


Dataset #: 3 Motif ID: 103 Motif name: NFKB1

Original motif     Consensus sequence: GGGGRTTCCCC Reverse complement motif     Consensus sequence: GGGGAAKCCCC

Best Matches for Motif ID 103 (Highest to Lowest)

Dataset #: 3
Motif ID: 125
Motif name: TP53
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.100899

Alignment:
MSGGACATGYCCGGGCATGT
-GGGGAAKCCCC--------

Original motif     Consensus sequence: MSGGACATGYCCGGGCATGT Reverse complement motif     Consensus sequence: ACATGCCCGGKCATGTCCSR


Dataset #: 3
Motif ID: 122
Motif name: Tcfcp2l1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 11
Similarity score: 0.103405

Alignment:
CKGGDTBDMMCTGG
GGGGRTTCCCC---

Original motif     Consensus sequence: CCAGYYHVADCCRG Reverse complement motif     Consensus sequence: CKGGDTBDMMCTGG


Dataset #: 4
Motif ID: 167
Motif name: rsyAGrkGGCGCCmyCTrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 11
Similarity score: 0.104275

Alignment:
DSYAGRKGGCGCCMYCTRSH
-----GGGGRTTCCCC----

Original motif     Consensus sequence: DSYAGRKGGCGCCMYCTRSH Reverse complement motif     Consensus sequence: HSKAGKYGGCGCCRMCTMSD


Dataset #: 4
Motif ID: 149
Motif name: asmAGRGGGCrCTGsmkc
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.109809

Alignment:
DBTSCAGMGCCCTCTRST
GGGGAAKCCCC-------

Original motif     Consensus sequence: ASMAGAGGGCRCTGSABH Reverse complement motif     Consensus sequence: DBTSCAGMGCCCTCTRST


Dataset #: 3
Motif ID: 117
Motif name: Spz1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.11048

Alignment:
AGGGTAWCAGC
GGGGAAKCCCC

Original motif     Consensus sequence: AGGGTAWCAGC Reverse complement motif     Consensus sequence: GCTGWTACCCT


Dataset #: 3 Motif ID: 104 Motif name: NFYA

Original motif     Consensus sequence: VBBRRCCAATSRGVDB Reverse complement motif     Consensus sequence: BHVCKSATTGGMKBVV

Best Matches for Motif ID 104 (Highest to Lowest)

Dataset #: 3
Motif ID: 109
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 16
Similarity score: 0.0555608

Alignment:
MSGKKRCGCWDCABTGBBCD
-VBBRRCCAATSRGVDB---

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 3
Motif ID: 131
Motif name: znf143
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 16
Similarity score: 0.0645227

Alignment:
BAHYTCCCAKMATGCMWYGC
-VBBRRCCAATSRGVDB---

Original motif     Consensus sequence: BAHYTCCCAKMATGCMWYGC Reverse complement motif     Consensus sequence: GCMWRGCATYRTGGGAMHTB


Dataset #: 3
Motif ID: 82
Motif name: ESR2
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 16
Similarity score: 0.0658537

Alignment:
BAGGYCABHBTGACCKHV
--BHVCKSATTGGMKBVV

Original motif     Consensus sequence: VHRGGTCABDBTGMCCTB Reverse complement motif     Consensus sequence: BAGGYCABHBTGACCKHV


Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 16
Similarity score: 0.0705004

Alignment:
BMSMGCCYMCTKSTGGMHM
--BHVCKSATTGGMKBVV-

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 3
Motif ID: 70
Motif name: Ar
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 16
Similarity score: 0.0709164

Alignment:
VRVDGGHACAVDDKGTHCTDWH
----VBBRRCCAATSRGVDB--

Original motif     Consensus sequence: HWDAGHACRHHVTGTHCCHVMV Reverse complement motif     Consensus sequence: VRVDGGHACAVDDKGTHCTDWH


Dataset #: 3 Motif ID: 105 Motif name: NHLH1

Original motif     Consensus sequence: VCGCAGCTGCGB Reverse complement motif     Consensus sequence: VCGCAGCTGCGV

Best Matches for Motif ID 105 (Highest to Lowest)

Dataset #: 3
Motif ID: 97
Motif name: Myf
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.0173692

Alignment:
CWSCWGMTGCKR
VCGCAGCTGCGV

Original motif     Consensus sequence: MRGCARCWGSWG Reverse complement motif     Consensus sequence: CWSCWGMTGCKR


Dataset #: 3
Motif ID: 109
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 12
Similarity score: 0.0355984

Alignment:
MSGKKRCGCWDCABTGBBCD
-----VCGCAGCTGCGB---

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 4
Motif ID: 170
Motif name: ssGGCrsTGCrs
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.0376107

Alignment:
VVGGCRSTGCVB
VCGCAGCTGCGB

Original motif     Consensus sequence: VVGGCRSTGCVB Reverse complement motif     Consensus sequence: BVGCASMGCCVV


Dataset #: 4
Motif ID: 156
Motif name: rgyGCCMyCTksTGGccd
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 12
Similarity score: 0.0465866

Alignment:
DDGCCASYAGMGGGCKVM
-VCGCAGCTGCGV-----

Original motif     Consensus sequence: RVYGCCCYCTKSTGGCHD Reverse complement motif     Consensus sequence: DDGCCASYAGMGGGCKVM


Dataset #: 4
Motif ID: 169
Motif name: yvTGCyGCCmCCwGgtG
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 12
Similarity score: 0.0468076

Alignment:
CDCCWGGTGGCAGCAVV
----VCGCAGCTGCGV-

Original motif     Consensus sequence: BVTGCTGCCACCWGGDG Reverse complement motif     Consensus sequence: CDCCWGGTGGCAGCAVV


Dataset #: 3 Motif ID: 106 Motif name: Nkx3-2

Original motif     Consensus sequence: BTRAGTGVV Reverse complement motif     Consensus sequence: BVCACTKAH

Best Matches for Motif ID 106 (Highest to Lowest)

Dataset #: 3
Motif ID: 109
Motif name: Pax5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 8
Number of overlap: 9
Similarity score: 0.0239583

Alignment:
MSGKKRCGCWDCABTGBBCD
----BVCACTKAH-------

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 3
Motif ID: 104
Motif name: NFYA
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 9
Similarity score: 0.0250758

Alignment:
VBBRRCCAATSRGVDB
---BVCACTKAH----

Original motif     Consensus sequence: VBBRRCCAATSRGVDB Reverse complement motif     Consensus sequence: BHVCKSATTGGMKBVV


Dataset #: 3
Motif ID: 84
Motif name: GABPA
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 9
Similarity score: 0.0255754

Alignment:
CCGGAAGTGVV
--BTRAGTGVV

Original motif     Consensus sequence: CCGGAAGTGVV Reverse complement motif     Consensus sequence: VVCACTTCCGG


Dataset #: 3
Motif ID: 114
Motif name: RUNX1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 9
Similarity score: 0.0262083

Alignment:
AAACCACAKVB
--BVCACTKAH

Original motif     Consensus sequence: BBYTGTGGTTT Reverse complement motif     Consensus sequence: AAACCACAKVB


Dataset #: 3
Motif ID: 96
Motif name: Mycn
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 9
Similarity score: 0.0296502

Alignment:
HSCACGTGGC
-BVCACTKAH

Original motif     Consensus sequence: HSCACGTGGC Reverse complement motif     Consensus sequence: GCCACGTGSD


Dataset #: 3 Motif ID: 107 Motif name: NR2F1

Original motif     Consensus sequence: TGAMCTTTGMMCYT Reverse complement motif     Consensus sequence: AKGYYCAAAGRTCA

Best Matches for Motif ID 107 (Highest to Lowest)

Dataset #: 3
Motif ID: 115
Motif name: RXRRAR_DR5
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 14
Similarity score: 0.0610709

Alignment:
RGKTCABVVRGAGGTCA
---AKGYYCAAAGRTCA

Original motif     Consensus sequence: RGKTCABVVRGAGGTCA Reverse complement motif     Consensus sequence: TGACCTCKVVBTGAYCK


Dataset #: 3
Motif ID: 82
Motif name: ESR2
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 14
Similarity score: 0.0695855

Alignment:
VHRGGTCABDBTGMCCTB
---AKGYYCAAAGRTCA-

Original motif     Consensus sequence: VHRGGTCABDBTGMCCTB Reverse complement motif     Consensus sequence: BAGGYCABHBTGACCKHV


Dataset #: 3
Motif ID: 113
Motif name: REST
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 6
Number of overlap: 14
Similarity score: 0.0703341

Alignment:
TTCAGCACCATGGACAGCKCC
--AKGYYCAAAGRTCA-----

Original motif     Consensus sequence: TTCAGCACCATGGACAGCKCC Reverse complement motif     Consensus sequence: GGYGCTGTCCATGGTGCTGAA


Dataset #: 3
Motif ID: 104
Motif name: NFYA
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 14
Similarity score: 0.0715605

Alignment:
VBBRRCCAATSRGVDB
--TGAMCTTTGMMCYT

Original motif     Consensus sequence: VBBRRCCAATSRGVDB Reverse complement motif     Consensus sequence: BHVCKSATTGGMKBVV


Dataset #: 3
Motif ID: 109
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 14
Similarity score: 0.0727368

Alignment:
MSGKKRCGCWDCABTGBBCD
----TGAMCTTTGMMCYT--

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 3 Motif ID: 108 Motif name: NR4A2

Original motif     Consensus sequence: AAGGTCAC Reverse complement motif     Consensus sequence: GTGACCTT

Best Matches for Motif ID 108 (Highest to Lowest)

Dataset #: 3
Motif ID: 81
Motif name: ESR1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.0193781

Alignment:
VDBHMAGGTCACCCTGACCY
----AAGGTCAC--------

Original motif     Consensus sequence: VDBHMAGGTCACCCTGACCY Reverse complement motif     Consensus sequence: MGGTCAGGGTGACCTRDBHV


Dataset #: 3
Motif ID: 82
Motif name: ESR2
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 10
Number of overlap: 8
Similarity score: 0.0196918

Alignment:
BAGGYCABHBTGACCKHV
---------GTGACCTT-

Original motif     Consensus sequence: VHRGGTCABDBTGMCCTB Reverse complement motif     Consensus sequence: BAGGYCABHBTGACCKHV


Dataset #: 3
Motif ID: 111
Motif name: PPARG
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 12
Number of overlap: 8
Similarity score: 0.0275817

Alignment:
ABTMGGTCACBGTGACCTAS
-----------GTGACCTT-

Original motif     Consensus sequence: STAGGTCACBGTGACCYABT Reverse complement motif     Consensus sequence: ABTMGGTCACBGTGACCTAS


Dataset #: 3
Motif ID: 70
Motif name: Ar
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 13
Number of overlap: 8
Similarity score: 0.0486154

Alignment:
VRVDGGHACAVDDKGTHCTDWH
------------GTGACCTT--

Original motif     Consensus sequence: HWDAGHACRHHVTGTHCCHVMV Reverse complement motif     Consensus sequence: VRVDGGHACAVDDKGTHCTDWH


Dataset #: 1
Motif ID: 10
Motif name: Motif 10
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0525645

Alignment:
CTGGCCTC
GTGACCTT

Original motif     Consensus sequence: CTGGCCTC Reverse complement motif     Consensus sequence: GAGGCCAG


Dataset #: 3 Motif ID: 109 Motif name: Pax5

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD

Best Matches for Motif ID 109 (Highest to Lowest)

Dataset #: 3
Motif ID: 81
Motif name: ESR1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.0458242

Alignment:
MGGTCAGGGTGACCTRDBHV
MSGKKRCGCWDCABTGBBCD

Original motif     Consensus sequence: VDBHMAGGTCACCCTGACCY Reverse complement motif     Consensus sequence: MGGTCAGGGTGACCTRDBHV


Dataset #: 3
Motif ID: 70
Motif name: Ar
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.052658

Alignment:
VRVDGGHACAVDDKGTHCTDWH
--MSGKKRCGCWDCABTGBBCD

Original motif     Consensus sequence: HWDAGHACRHHVTGTHCCHVMV Reverse complement motif     Consensus sequence: VRVDGGHACAVDDKGTHCTDWH


Dataset #: 4
Motif ID: 167
Motif name: rsyAGrkGGCGCCmyCTrsy
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.0660509

Alignment:
HSKAGKYGGCGCCRMCTMSD
MSGKKRCGCWDCABTGBBCD

Original motif     Consensus sequence: DSYAGRKGGCGCCMYCTRSH Reverse complement motif     Consensus sequence: HSKAGKYGGCGCCRMCTMSD


Dataset #: 3
Motif ID: 131
Motif name: znf143
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 19
Similarity score: 0.552768

Alignment:
-BAHYTCCCAKMATGCMWYGC
MSGKKRCGCWDCABTGBBCD-

Original motif     Consensus sequence: BAHYTCCCAKMATGCMWYGC Reverse complement motif     Consensus sequence: GCMWRGCATYRTGGGAMHTB


Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 19
Similarity score: 0.559888

Alignment:
YDRCCASYAGRKGGCRSYV-
DGVBCABTGDWGCGKRRCSR

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 3 Motif ID: 110 Motif name: PLAG1

Original motif     Consensus sequence: GGGGCCCAAGGGGG Reverse complement motif     Consensus sequence: CCCCCTTGGGCCCC

Best Matches for Motif ID 110 (Highest to Lowest)

Dataset #: 3
Motif ID: 129
Motif name: Zfp423
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0944264

Alignment:
GSMMCCYARGGKKKC
GGGGCCCAAGGGGG-

Original motif     Consensus sequence: GSMMCCYARGGKKKC Reverse complement motif     Consensus sequence: GYRYCCMTKGGYRSC


Dataset #: 4
Motif ID: 166
Motif name: CasCAGrGGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0955683

Alignment:
BSKGCCCKCTGGTG
GGGGCCCAAGGGGG

Original motif     Consensus sequence: CACCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCKCTGGTG


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 6
Number of overlap: 14
Similarity score: 0.0963962

Alignment:
VHGGCCAGMAGAGGGCRBY
GGGGCCCAAGGGGG-----

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 4
Motif ID: 165
Motif name: wgGCCAshAGrGGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0984905

Alignment:
HDGCCACHAGRGGGCRBY
GGGGCCCAAGGGGG----

Original motif     Consensus sequence: HDGCCACHAGRGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCKCTHGTGGCHH


Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0985427

Alignment:
BMSMGCCYMCTKSTGGMHM
-----CCCCCTTGGGCCCC

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 3 Motif ID: 111 Motif name: PPARG

Original motif     Consensus sequence: STAGGTCACBGTGACCYABT Reverse complement motif     Consensus sequence: ABTMGGTCACBGTGACCTAS

Best Matches for Motif ID 111 (Highest to Lowest)

Dataset #: 3
Motif ID: 70
Motif name: Ar
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 20
Similarity score: 0.0567628

Alignment:
HWDAGHACRHHVTGTHCCHVMV
--ABTMGGTCACBGTGACCTAS

Original motif     Consensus sequence: HWDAGHACRHHVTGTHCCHVMV Reverse complement motif     Consensus sequence: VRVDGGHACAVDDKGTHCTDWH


Dataset #: 4
Motif ID: 167
Motif name: rsyAGrkGGCGCCmyCTrsy
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 0.574193

Alignment:
HSKAGKYGGCGCCRMCTMSD-
-STAGGTCACBGTGACCYABT

Original motif     Consensus sequence: DSYAGRKGGCGCCMYCTRSH Reverse complement motif     Consensus sequence: HSKAGKYGGCGCCRMCTMSD


Dataset #: 3
Motif ID: 82
Motif name: ESR2
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 18
Similarity score: 1.00511

Alignment:
--BAGGYCABHBTGACCKHV
ABTMGGTCACBGTGACCTAS

Original motif     Consensus sequence: VHRGGTCABDBTGMCCTB Reverse complement motif     Consensus sequence: BAGGYCABHBTGACCKHV


Dataset #: 3
Motif ID: 81
Motif name: ESR1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 18
Similarity score: 1.01193

Alignment:
--VDBHMAGGTCACCCTGACCY
ABTMGGTCACBGTGACCTAS--

Original motif     Consensus sequence: VDBHMAGGTCACCCTGACCY Reverse complement motif     Consensus sequence: MGGTCAGGGTGACCTRDBHV


Dataset #: 3
Motif ID: 109
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 18
Similarity score: 1.07268

Alignment:
MSGKKRCGCWDCABTGBBCD--
--STAGGTCACBGTGACCYABT

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 3 Motif ID: 112 Motif name: RELA

Original motif     Consensus sequence: GGGRATTTCC Reverse complement motif     Consensus sequence: GGAAATKCCC

Best Matches for Motif ID 112 (Highest to Lowest)

Dataset #: 3
Motif ID: 102
Motif name: NF-kappaB
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.00719219

Alignment:
GGMAAYKCCC
GGAAATKCCC

Original motif     Consensus sequence: GGGRMTTYCC Reverse complement motif     Consensus sequence: GGMAAYKCCC


Dataset #: 3
Motif ID: 103
Motif name: NFKB1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.0283179

Alignment:
GGGGRTTCCCC
GGGRATTTCC-

Original motif     Consensus sequence: GGGGRTTCCCC Reverse complement motif     Consensus sequence: GGGGAAKCCCC


Dataset #: 3
Motif ID: 125
Motif name: TP53
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 9
Number of overlap: 10
Similarity score: 0.057648

Alignment:
MSGGACATGYCCGGGCATGT
--GGAAATKCCC--------

Original motif     Consensus sequence: MSGGACATGYCCGGGCATGT Reverse complement motif     Consensus sequence: ACATGCCCGGKCATGTCCSR


Dataset #: 3
Motif ID: 113
Motif name: REST
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0666417

Alignment:
GGYGCTGTCCATGGTGCTGAA
GGGRATTTCC-----------

Original motif     Consensus sequence: TTCAGCACCATGGACAGCKCC Reverse complement motif     Consensus sequence: GGYGCTGTCCATGGTGCTGAA


Dataset #: 4
Motif ID: 170
Motif name: ssGGCrsTGCrs
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0784221

Alignment:
VVGGCRSTGCVB
--GGAAATKCCC

Original motif     Consensus sequence: VVGGCRSTGCVB Reverse complement motif     Consensus sequence: BVGCASMGCCVV


Dataset #: 3 Motif ID: 113 Motif name: REST

Original motif     Consensus sequence: TTCAGCACCATGGACAGCKCC Reverse complement motif     Consensus sequence: GGYGCTGTCCATGGTGCTGAA

Best Matches for Motif ID 113 (Highest to Lowest)

Dataset #: 3
Motif ID: 70
Motif name: Ar
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 21
Similarity score: 0.0685835

Alignment:
VRVDGGHACAVDDKGTHCTDWH
-GGYGCTGTCCATGGTGCTGAA

Original motif     Consensus sequence: HWDAGHACRHHVTGTHCCHVMV Reverse complement motif     Consensus sequence: VRVDGGHACAVDDKGTHCTDWH


Dataset #: 3
Motif ID: 131
Motif name: znf143
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 1.0683

Alignment:
GCMWRGCATYRTGGGAMHTB--
-TTCAGCACCATGGACAGCKCC

Original motif     Consensus sequence: BAHYTCCCAKMATGCMWYGC Reverse complement motif     Consensus sequence: GCMWRGCATYRTGGGAMHTB


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 19
Similarity score: 1.07477

Alignment:
--VHGGCCAGMAGAGGGCRBY
TTCAGCACCATGGACAGCKCC

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 4
Motif ID: 156
Motif name: rgyGCCMyCTksTGGccd
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 18
Similarity score: 1.57039

Alignment:
---DDGCCASYAGMGGGCKVM
TTCAGCACCATGGACAGCKCC

Original motif     Consensus sequence: RVYGCCCYCTKSTGGCHD Reverse complement motif     Consensus sequence: DDGCCASYAGMGGGCKVM


Dataset #: 4
Motif ID: 149
Motif name: asmAGRGGGCrCTGsmkc
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 18
Similarity score: 1.57097

Alignment:
DBTSCAGMGCCCTCTRST---
GGYGCTGTCCATGGTGCTGAA

Original motif     Consensus sequence: ASMAGAGGGCRCTGSABH Reverse complement motif     Consensus sequence: DBTSCAGMGCCCTCTRST


Dataset #: 3 Motif ID: 114 Motif name: RUNX1

Original motif     Consensus sequence: BBYTGTGGTTT Reverse complement motif     Consensus sequence: AAACCACAKVB

Best Matches for Motif ID 114 (Highest to Lowest)

Dataset #: 3
Motif ID: 70
Motif name: Ar
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.0360379

Alignment:
VRVDGGHACAVDDKGTHCTDWH
-BBYTGTGGTTT----------

Original motif     Consensus sequence: HWDAGHACRHHVTGTHCCHVMV Reverse complement motif     Consensus sequence: VRVDGGHACAVDDKGTHCTDWH


Dataset #: 3
Motif ID: 87
Motif name: HNF4A
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0433682

Alignment:
RGGBCAAAGKYCA
--AAACCACAKVB

Original motif     Consensus sequence: RGGBCAAAGKYCA Reverse complement motif     Consensus sequence: TGMYCTTTGBCCK


Dataset #: 4
Motif ID: 165
Motif name: wgGCCAshAGrGGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 8
Number of overlap: 11
Similarity score: 0.0447401

Alignment:
KBKGCCCKCTHGTGGCHH
-------BBYTGTGGTTT

Original motif     Consensus sequence: HDGCCACHAGRGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCKCTHGTGGCHH


Dataset #: 3
Motif ID: 88
Motif name: INSM1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.0456894

Alignment:
TGYCAGGGGGCR
-BBYTGTGGTTT

Original motif     Consensus sequence: TGYCAGGGGGCR Reverse complement motif     Consensus sequence: MGCCCCCTGMCA


Dataset #: 4
Motif ID: 156
Motif name: rgyGCCMyCTksTGGccd
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 8
Number of overlap: 11
Similarity score: 0.0459745

Alignment:
RVYGCCCYCTKSTGGCHD
-------BBYTGTGGTTT

Original motif     Consensus sequence: RVYGCCCYCTKSTGGCHD Reverse complement motif     Consensus sequence: DDGCCASYAGMGGGCKVM


Dataset #: 3 Motif ID: 115 Motif name: RXRRAR_DR5

Original motif     Consensus sequence: RGKTCABVVRGAGGTCA Reverse complement motif     Consensus sequence: TGACCTCKVVBTGAYCK

Best Matches for Motif ID 115 (Highest to Lowest)

Dataset #: 3
Motif ID: 111
Motif name: PPARG
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 17
Similarity score: 0.0471437

Alignment:
STAGGTCACBGTGACCYABT
--RGKTCABVVRGAGGTCA-

Original motif     Consensus sequence: STAGGTCACBGTGACCYABT Reverse complement motif     Consensus sequence: ABTMGGTCACBGTGACCTAS


Dataset #: 3
Motif ID: 81
Motif name: ESR1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 17
Similarity score: 0.0543729

Alignment:
MGGTCAGGGTGACCTRDBHV
---RGKTCABVVRGAGGTCA

Original motif     Consensus sequence: VDBHMAGGTCACCCTGACCY Reverse complement motif     Consensus sequence: MGGTCAGGGTGACCTRDBHV


Dataset #: 3
Motif ID: 82
Motif name: ESR2
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 17
Similarity score: 0.058015

Alignment:
VHRGGTCABDBTGMCCTB
-TGACCTCKVVBTGAYCK

Original motif     Consensus sequence: VHRGGTCABDBTGMCCTB Reverse complement motif     Consensus sequence: BAGGYCABHBTGACCKHV


Dataset #: 3
Motif ID: 109
Motif name: Pax5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 17
Similarity score: 0.0584167

Alignment:
MSGKKRCGCWDCABTGBBCD
---TGACCTCKVVBTGAYCK

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 17
Similarity score: 0.0732845

Alignment:
KBKGCCCTCTYCTGGCCHV
--TGACCTCKVVBTGAYCK

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 3 Motif ID: 116 Motif name: SP1

Original motif     Consensus sequence: CCCCKCCCCC Reverse complement motif     Consensus sequence: GGGGGYGGGG

Best Matches for Motif ID 116 (Highest to Lowest)

Dataset #: 4
Motif ID: 155
Motif name: csCSCCdCCCcs
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 10
Similarity score: 0.0226218

Alignment:
VBCCCCDCCCHV
--CCCCKCCCCC

Original motif     Consensus sequence: VBCCCCDCCCHV Reverse complement motif     Consensus sequence: VDGGGDGGGGBV


Dataset #: 4
Motif ID: 167
Motif name: rsyAGrkGGCGCCmyCTrsy
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 10
Number of overlap: 10
Similarity score: 0.0535317

Alignment:
HSKAGKYGGCGCCRMCTMSD
-GGGGGYGGGG---------

Original motif     Consensus sequence: DSYAGRKGGCGCCMYCTRSH Reverse complement motif     Consensus sequence: HSKAGKYGGCGCCRMCTMSD


Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 10
Number of overlap: 10
Similarity score: 0.0604118

Alignment:
YDRCCASYAGRKGGCRSYV
GGGGGYGGGG---------

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 4
Motif ID: 146
Motif name: myrGYGCCmCCTast
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 5
Number of overlap: 10
Similarity score: 0.0650794

Alignment:
ASTAGGYGGCGCTBB
-GGGGGYGGGG----

Original motif     Consensus sequence: VBAGCGCCMCCTAST Reverse complement motif     Consensus sequence: ASTAGGYGGCGCTBB


Dataset #: 3
Motif ID: 130
Motif name: Zfx
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0664832

Alignment:
VAGGCCBBGGCVBB
----CCCCKCCCCC

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB


Dataset #: 3 Motif ID: 117 Motif name: Spz1

Original motif     Consensus sequence: AGGGTAWCAGC Reverse complement motif     Consensus sequence: GCTGWTACCCT

Best Matches for Motif ID 117 (Highest to Lowest)

Dataset #: 4
Motif ID: 143
Motif name: AgmAGAGGGCrscAGak
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 6
Number of overlap: 11
Similarity score: 0.0235542

Alignment:
RTCTGSTGCCCTCTYCT
-GCTGWTACCCT-----

Original motif     Consensus sequence: AGMAGAGGGCASCAGAK Reverse complement motif     Consensus sequence: RTCTGSTGCCCTCTYCT


Dataset #: 4
Motif ID: 164
Motif name: asyAGrkGGCRGCAga
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 6
Number of overlap: 11
Similarity score: 0.0381204

Alignment:
ASYAGRKGGCAGCABH
-----AGGGTAWCAGC

Original motif     Consensus sequence: ASYAGRKGGCAGCABH Reverse complement motif     Consensus sequence: HBTGCTGCCYMCTKST


Dataset #: 3
Motif ID: 70
Motif name: Ar
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.0401654

Alignment:
VRVDGGHACAVDDKGTHCTDWH
-GCTGWTACCCT----------

Original motif     Consensus sequence: HWDAGHACRHHVTGTHCCHVMV Reverse complement motif     Consensus sequence: VRVDGGHACAVDDKGTHCTDWH


Dataset #: 3
Motif ID: 81
Motif name: ESR1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 11
Similarity score: 0.0458949

Alignment:
VDBHMAGGTCACCCTGACCY
-----GCTGWTACCCT----

Original motif     Consensus sequence: VDBHMAGGTCACCCTGACCY Reverse complement motif     Consensus sequence: MGGTCAGGGTGACCTRDBHV


Dataset #: 3
Motif ID: 122
Motif name: Tcfcp2l1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 11
Similarity score: 0.0503934

Alignment:
CCAGYYHVADCCRG
---GCTGWTACCCT

Original motif     Consensus sequence: CCAGYYHVADCCRG Reverse complement motif     Consensus sequence: CKGGDTBDMMCTGG


Dataset #: 3 Motif ID: 118 Motif name: SRF

Original motif     Consensus sequence: GCCCATATATGG Reverse complement motif     Consensus sequence: CCATATATGGGC

Best Matches for Motif ID 118 (Highest to Lowest)

Dataset #: 4
Motif ID: 165
Motif name: wgGCCAshAGrGGGCrsy
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 12
Similarity score: 0.0548555

Alignment:
KBKGCCCKCTHGTGGCHH
----CCATATATGGGC--

Original motif     Consensus sequence: HDGCCACHAGRGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCKCTHGTGGCHH


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 5
Number of overlap: 12
Similarity score: 0.0556649

Alignment:
KBKGCCCTCTYCTGGCCHV
---GCCCATATATGG----

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 4
Motif ID: 156
Motif name: rgyGCCMyCTksTGGccd
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 12
Similarity score: 0.0558448

Alignment:
DDGCCASYAGMGGGCKVM
--GCCCATATATGG----

Original motif     Consensus sequence: RVYGCCCYCTKSTGGCHD Reverse complement motif     Consensus sequence: DDGCCASYAGMGGGCKVM


Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 12
Similarity score: 0.0566321

Alignment:
YDRCCASYAGRKGGCRSYV
----CCATATATGGGC---

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 2
Motif ID: 67
Motif name: Motif 67
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 12
Similarity score: 0.0566949

Alignment:
CCASHAGKGGGCKS
CCATATATGGGC--

Original motif     Consensus sequence: SYGCCCYCTDSTGG Reverse complement motif     Consensus sequence: CCASHAGKGGGCKS


Dataset #: 3 Motif ID: 119 Motif name: Stat3

Original motif     Consensus sequence: TTCCAGGAAG Reverse complement motif     Consensus sequence: CTTCCTGGAA

Best Matches for Motif ID 119 (Highest to Lowest)

Dataset #: 3
Motif ID: 79
Motif name: ELK1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0612721

Alignment:
MTTCCGGHBV
CTTCCTGGAA

Original motif     Consensus sequence: VDDCCGGAAR Reverse complement motif     Consensus sequence: MTTCCGGHBV


Dataset #: 3
Motif ID: 77
Motif name: EBF1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0803002

Alignment:
TCCCTYGGGY
TTCCAGGAAG

Original motif     Consensus sequence: MCCCMAGGGA Reverse complement motif     Consensus sequence: TCCCTYGGGY


Dataset #: 3
Motif ID: 88
Motif name: INSM1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0834676

Alignment:
TGYCAGGGGGCR
TTCCAGGAAG--

Original motif     Consensus sequence: TGYCAGGGGGCR Reverse complement motif     Consensus sequence: MGCCCCCTGMCA


Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.0852106

Alignment:
YDRCCASYAGRKGGCRSYV
-TTCCAGGAAG--------

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 3
Motif ID: 125
Motif name: TP53
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 8
Number of overlap: 10
Similarity score: 0.087969

Alignment:
MSGGACATGYCCGGGCATGT
-------CTTCCTGGAA---

Original motif     Consensus sequence: MSGGACATGYCCGGGCATGT Reverse complement motif     Consensus sequence: ACATGCCCGGKCATGTCCSR


Dataset #: 3 Motif ID: 120 Motif name: T

Original motif     Consensus sequence: CTAGGTGTGAA Reverse complement motif     Consensus sequence: TTCACACCTAG

Best Matches for Motif ID 120 (Highest to Lowest)

Dataset #: 4
Motif ID: 144
Motif name: ctCTrsyGCCmCCTast
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.0559721

Alignment:
HDCTGSYGCCMCCTAST
-----TTCACACCTAG-

Original motif     Consensus sequence: HDCTGSYGCCMCCTAST Reverse complement motif     Consensus sequence: ASTAGGYGGCMSCAGDD


Dataset #: 4
Motif ID: 164
Motif name: asyAGrkGGCRGCAga
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.0641201

Alignment:
ASYAGRKGGCAGCABH
-CTAGGTGTGAA----

Original motif     Consensus sequence: ASYAGRKGGCAGCABH Reverse complement motif     Consensus sequence: HBTGCTGCCYMCTKST


Dataset #: 4
Motif ID: 146
Motif name: myrGYGCCmCCTast
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 11
Similarity score: 0.0654989

Alignment:
VBAGCGCCMCCTAST
---TTCACACCTAG-

Original motif     Consensus sequence: VBAGCGCCMCCTAST Reverse complement motif     Consensus sequence: ASTAGGYGGCGCTBB


Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 7
Number of overlap: 11
Similarity score: 0.0692022

Alignment:
YDRCCASYAGRKGGCRSYV
------CTAGGTGTGAA--

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 3
Motif ID: 111
Motif name: PPARG
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 10
Number of overlap: 11
Similarity score: 0.070764

Alignment:
ABTMGGTCACBGTGACCTAS
---------TTCACACCTAG

Original motif     Consensus sequence: STAGGTCACBGTGACCYABT Reverse complement motif     Consensus sequence: ABTMGGTCACBGTGACCTAS


Dataset #: 3 Motif ID: 121 Motif name: TAL1TCF3

Original motif     Consensus sequence: HVAMCATCTGKT Reverse complement motif     Consensus sequence: ARCAGATGRTVD

Best Matches for Motif ID 121 (Highest to Lowest)

Dataset #: 4
Motif ID: 147
Motif name: asCAGrkGGCrsy
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.0388867

Alignment:
ASCAGRGGGCRSB
ARCAGATGRTVD-

Original motif     Consensus sequence: ASCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCMCTGST


Dataset #: 4
Motif ID: 166
Motif name: CasCAGrGGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 12
Similarity score: 0.0389554

Alignment:
BSKGCCCKCTGGTG
-HVAMCATCTGKT-

Original motif     Consensus sequence: CACCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCKCTGGTG


Dataset #: 3
Motif ID: 104
Motif name: NFYA
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 12
Similarity score: 0.0418463

Alignment:
BHVCKSATTGGMKBVV
---HVAMCATCTGKT-

Original motif     Consensus sequence: VBBRRCCAATSRGVDB Reverse complement motif     Consensus sequence: BHVCKSATTGGMKBVV


Dataset #: 4
Motif ID: 151
Motif name: agrCCAGmAGrg
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.0439721

Alignment:
HVGCCAGMAGRG
HVAMCATCTGKT

Original motif     Consensus sequence: HVGCCAGMAGRG Reverse complement motif     Consensus sequence: CKCTRCTGGCVH


Dataset #: 4
Motif ID: 143
Motif name: AgmAGAGGGCrscAGak
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 6
Number of overlap: 12
Similarity score: 0.0474478

Alignment:
AGMAGAGGGCASCAGAK
ARCAGATGRTVD-----

Original motif     Consensus sequence: AGMAGAGGGCASCAGAK Reverse complement motif     Consensus sequence: RTCTGSTGCCCTCTYCT


Dataset #: 3 Motif ID: 122 Motif name: Tcfcp2l1

Original motif     Consensus sequence: CCAGYYHVADCCRG Reverse complement motif     Consensus sequence: CKGGDTBDMMCTGG

Best Matches for Motif ID 122 (Highest to Lowest)

Dataset #: 4
Motif ID: 167
Motif name: rsyAGrkGGCGCCmyCTrsy
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 6
Number of overlap: 14
Similarity score: 0.0620246

Alignment:
DSYAGRKGGCGCCMYCTRSH
-----CKGGDTBDMMCTGG-

Original motif     Consensus sequence: DSYAGRKGGCGCCMYCTRSH Reverse complement motif     Consensus sequence: HSKAGKYGGCGCCRMCTMSD


Dataset #: 3
Motif ID: 70
Motif name: Ar
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 7
Number of overlap: 14
Similarity score: 0.0642855

Alignment:
HWDAGHACRHHVTGTHCCHVMV
------CCAGYYHVADCCRG--

Original motif     Consensus sequence: HWDAGHACRHHVTGTHCCHVMV Reverse complement motif     Consensus sequence: VRVDGGHACAVDDKGTHCTDWH


Dataset #: 4
Motif ID: 144
Motif name: ctCTrsyGCCmCCTast
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 14
Similarity score: 0.0675705

Alignment:
HDCTGSYGCCMCCTAST
--CKGGDTBDMMCTGG-

Original motif     Consensus sequence: HDCTGSYGCCMCCTAST Reverse complement motif     Consensus sequence: ASTAGGYGGCMSCAGDD


Dataset #: 3
Motif ID: 81
Motif name: ESR1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 14
Similarity score: 0.0676841

Alignment:
MGGTCAGGGTGACCTRDBHV
---CCAGYYHVADCCRG---

Original motif     Consensus sequence: VDBHMAGGTCACCCTGACCY Reverse complement motif     Consensus sequence: MGGTCAGGGTGACCTRDBHV


Dataset #: 3
Motif ID: 130
Motif name: Zfx
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0677766

Alignment:
BBVGCCBVGGCCTV
CCAGYYHVADCCRG

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB


Dataset #: 3 Motif ID: 123 Motif name: TFAP2A

Original motif     Consensus sequence: GCCBBVRGS Reverse complement motif     Consensus sequence: SCMVBBGGC

Best Matches for Motif ID 123 (Highest to Lowest)

Dataset #: 3
Motif ID: 130
Motif name: Zfx
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 9
Similarity score: 0.0365038

Alignment:
VAGGCCBBGGCVBB
---GCCBBVRGS--

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB


Dataset #: 4
Motif ID: 137
Motif name: rgCGCCmyCTgs
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 9
Similarity score: 0.0578475

Alignment:
SHAGKGGGCGCB
SCMVBBGGC---

Original motif     Consensus sequence: VGCGCCCYCTDS Reverse complement motif     Consensus sequence: SHAGKGGGCGCB


Dataset #: 3
Motif ID: 124
Motif name: TLX1NFIC
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 9
Similarity score: 0.0626983

Alignment:
TGGCASBDHGCCAA
--GCCBBVRGS---

Original motif     Consensus sequence: TGGCASBDHGCCAA Reverse complement motif     Consensus sequence: TTGGCHDBSTGCCA


Dataset #: 4
Motif ID: 147
Motif name: asCAGrkGGCrsy
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 9
Similarity score: 0.0631625

Alignment:
ASCAGRGGGCRSB
-SCMVBBGGC---

Original motif     Consensus sequence: ASCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCMCTGST


Dataset #: 4
Motif ID: 153
Motif name: scAGrkGGCGcy
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 9
Similarity score: 0.0640748

Alignment:
SHAGRGGGCGCB
SCMVBBGGC---

Original motif     Consensus sequence: SHAGRGGGCGCB Reverse complement motif     Consensus sequence: VGCGCCCMCTDS


Dataset #: 3 Motif ID: 124 Motif name: TLX1NFIC

Original motif     Consensus sequence: TGGCASBDHGCCAA Reverse complement motif     Consensus sequence: TTGGCHDBSTGCCA

Best Matches for Motif ID 124 (Highest to Lowest)

Dataset #: 3
Motif ID: 81
Motif name: ESR1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 7
Number of overlap: 14
Similarity score: 0.0758334

Alignment:
VDBHMAGGTCACCCTGACCY
------TGGCASBDHGCCAA

Original motif     Consensus sequence: VDBHMAGGTCACCCTGACCY Reverse complement motif     Consensus sequence: MGGTCAGGGTGACCTRDBHV


Dataset #: 3
Motif ID: 131
Motif name: znf143
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 14
Similarity score: 0.0763138

Alignment:
GCMWRGCATYRTGGGAMHTB
---TGGCASBDHGCCAA---

Original motif     Consensus sequence: BAHYTCCCAKMATGCMWYGC Reverse complement motif     Consensus sequence: GCMWRGCATYRTGGGAMHTB


Dataset #: 3
Motif ID: 82
Motif name: ESR2
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 14
Similarity score: 0.0777688

Alignment:
VHRGGTCABDBTGMCCTB
---TGGCASBDHGCCAA-

Original motif     Consensus sequence: VHRGGTCABDBTGMCCTB Reverse complement motif     Consensus sequence: BAGGYCABHBTGACCKHV


Dataset #: 3
Motif ID: 111
Motif name: PPARG
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 14
Similarity score: 0.0838712

Alignment:
STAGGTCACBGTGACCYABT
---TGGCASBDHGCCAA---

Original motif     Consensus sequence: STAGGTCACBGTGACCYABT Reverse complement motif     Consensus sequence: ABTMGGTCACBGTGACCTAS


Dataset #: 3
Motif ID: 113
Motif name: REST
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 14
Similarity score: 0.0916353

Alignment:
TTCAGCACCATGGACAGCKCC
--TGGCASBDHGCCAA-----

Original motif     Consensus sequence: TTCAGCACCATGGACAGCKCC Reverse complement motif     Consensus sequence: GGYGCTGTCCATGGTGCTGAA


Dataset #: 3 Motif ID: 125 Motif name: TP53

Original motif     Consensus sequence: MSGGACATGYCCGGGCATGT Reverse complement motif     Consensus sequence: ACATGCCCGGKCATGTCCSR

Best Matches for Motif ID 125 (Highest to Lowest)

Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 19
Similarity score: 0.0641029

Alignment:
-KBKGCCCTCTYCTGGCCHV
ACATGCCCGGKCATGTCCSR

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 3
Motif ID: 131
Motif name: znf143
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 19
Similarity score: 0.0730057

Alignment:
-BAHYTCCCAKMATGCMWYGC
ACATGCCCGGKCATGTCCSR-

Original motif     Consensus sequence: BAHYTCCCAKMATGCMWYGC Reverse complement motif     Consensus sequence: GCMWRGCATYRTGGGAMHTB


Dataset #: 3
Motif ID: 82
Motif name: ESR2
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 15
Similarity score: 2.07342

Alignment:
-----BAGGYCABHBTGACCKHV
MSGGACATGYCCGGGCATGT---

Original motif     Consensus sequence: VHRGGTCABDBTGMCCTB Reverse complement motif     Consensus sequence: BAGGYCABHBTGACCKHV


Dataset #: 3
Motif ID: 130
Motif name: Zfx
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 2.55908

Alignment:
------VAGGCCBBGGCVBB
ACATGCCCGGKCATGTCCSR

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB


Dataset #: 3
Motif ID: 122
Motif name: Tcfcp2l1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 2.56997

Alignment:
------CKGGDTBDMMCTGG
MSGGACATGYCCGGGCATGT

Original motif     Consensus sequence: CCAGYYHVADCCRG Reverse complement motif     Consensus sequence: CKGGDTBDMMCTGG


Dataset #: 3 Motif ID: 126 Motif name: USF1

Original motif     Consensus sequence: CACGTGR Reverse complement motif     Consensus sequence: MCACGTG

Best Matches for Motif ID 126 (Highest to Lowest)

Dataset #: 3
Motif ID: 91
Motif name: MAX
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 7
Similarity score: 0

Alignment:
DAHCACGTGD
-MCACGTG--

Original motif     Consensus sequence: DAHCACGTGD Reverse complement motif     Consensus sequence: BCACGTGDTD


Dataset #: 3
Motif ID: 95
Motif name: MYCMAX
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 7
Similarity score: 0.0108143

Alignment:
ACCACGTGSTM
-MCACGTG---

Original motif     Consensus sequence: RASCACGTGGT Reverse complement motif     Consensus sequence: ACCACGTGSTM


Dataset #: 3
Motif ID: 94
Motif name: Myc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 7
Similarity score: 0.0198377

Alignment:
VGCACGTGGH
--CACGTGR-

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV


Dataset #: 3
Motif ID: 96
Motif name: Mycn
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 7
Similarity score: 0.0207062

Alignment:
HSCACGTGGC
--CACGTGR-

Original motif     Consensus sequence: HSCACGTGGC Reverse complement motif     Consensus sequence: GCCACGTGSD


Dataset #: 3
Motif ID: 86
Motif name: HIF1AARNT
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 7
Similarity score: 0.0436113

Alignment:
VBACGTGV
-MCACGTG

Original motif     Consensus sequence: VBACGTGV Reverse complement motif     Consensus sequence: VCACGTBV


Dataset #: 3 Motif ID: 127 Motif name: YY1

Original motif     Consensus sequence: RCCATB Reverse complement motif     Consensus sequence: BATGGM

Best Matches for Motif ID 127 (Highest to Lowest)

Dataset #: 2
Motif ID: 61
Motif name: Motif 61
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.00122549

Alignment:
KCCATCT
-RCCATB

Original motif     Consensus sequence: AGATGGY Reverse complement motif     Consensus sequence: KCCATCT


Dataset #: 1
Motif ID: 12
Motif name: Motif 12
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.00857843

Alignment:
GAGCCATC
RCCATB--

Original motif     Consensus sequence: GATGGCTC Reverse complement motif     Consensus sequence: GAGCCATC


Dataset #: 4
Motif ID: 145
Motif name: grCCACyAGAkG
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.022036

Alignment:
CYTCTKGTGGHH
-----BATGGM-

Original motif     Consensus sequence: DDCCACYAGAKG Reverse complement motif     Consensus sequence: CYTCTKGTGGHH


Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.0220417

Alignment:
BMSMGCCYMCTKSTGGMHM
-----------BATGGM--

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 4
Motif ID: 138
Motif name: grCCACyAGAkG
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.0223679

Alignment:
DDCCACYAGAKG
-RCCATB-----

Original motif     Consensus sequence: DDCCACYAGAKG Reverse complement motif     Consensus sequence: CYTCTMGTGGHH


Dataset #: 3 Motif ID: 128 Motif name: ZEB1

Original motif     Consensus sequence: CACCTD Reverse complement motif     Consensus sequence: HAGGTG

Best Matches for Motif ID 128 (Highest to Lowest)

Dataset #: 3
Motif ID: 120
Motif name: T
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.0192581

Alignment:
TTCACACCTAG
-CACCTD----

Original motif     Consensus sequence: CTAGGTGTGAA Reverse complement motif     Consensus sequence: TTCACACCTAG


Dataset #: 4
Motif ID: 146
Motif name: myrGYGCCmCCTast
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.0325288

Alignment:
VBAGCGCCMCCTAST
-------CACCTD--

Original motif     Consensus sequence: VBAGCGCCMCCTAST Reverse complement motif     Consensus sequence: ASTAGGYGGCGCTBB


Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 8
Number of overlap: 6
Similarity score: 0.0341274

Alignment:
BMSMGCCYMCTKSTGGMHM
-------CACCTD------

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 4
Motif ID: 164
Motif name: asyAGrkGGCRGCAga
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 9
Number of overlap: 6
Similarity score: 0.0351031

Alignment:
ASYAGRKGGCAGCABH
--HAGGTG--------

Original motif     Consensus sequence: ASYAGRKGGCAGCABH Reverse complement motif     Consensus sequence: HBTGCTGCCYMCTKST


Dataset #: 4
Motif ID: 144
Motif name: ctCTrsyGCCmCCTast
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.0356696

Alignment:
HDCTGSYGCCMCCTAST
---------CACCTD--

Original motif     Consensus sequence: HDCTGSYGCCMCCTAST Reverse complement motif     Consensus sequence: ASTAGGYGGCMSCAGDD


Dataset #: 3 Motif ID: 129 Motif name: Zfp423

Original motif     Consensus sequence: GSMMCCYARGGKKKC Reverse complement motif     Consensus sequence: GYRYCCMTKGGYRSC

Best Matches for Motif ID 129 (Highest to Lowest)

Dataset #: 3
Motif ID: 104
Motif name: NFYA
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 15
Similarity score: 0.0358106

Alignment:
BHVCKSATTGGMKBVV
GYRYCCMTKGGYRSC-

Original motif     Consensus sequence: VBBRRCCAATSRGVDB Reverse complement motif     Consensus sequence: BHVCKSATTGGMKBVV


Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 15
Similarity score: 0.0359705

Alignment:
BMSMGCCYMCTKSTGGMHM
--GYRYCCMTKGGYRSC--

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 4
Motif ID: 156
Motif name: rgyGCCMyCTksTGGccd
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 15
Similarity score: 0.0382225

Alignment:
RVYGCCCYCTKSTGGCHD
-GYRYCCMTKGGYRSC--

Original motif     Consensus sequence: RVYGCCCYCTKSTGGCHD Reverse complement motif     Consensus sequence: DDGCCASYAGMGGGCKVM


Dataset #: 3
Motif ID: 70
Motif name: Ar
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 15
Similarity score: 0.0429662

Alignment:
HWDAGHACRHHVTGTHCCHVMV
---GSMMCCYARGGKKKC----

Original motif     Consensus sequence: HWDAGHACRHHVTGTHCCHVMV Reverse complement motif     Consensus sequence: VRVDGGHACAVDDKGTHCTDWH


Dataset #: 3
Motif ID: 109
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 15
Similarity score: 0.0430294

Alignment:
DGVBCABTGDWGCGKRRCSR
--GSMMCCYARGGKKKC---

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 3 Motif ID: 130 Motif name: Zfx

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB

Best Matches for Motif ID 130 (Highest to Lowest)

Dataset #: 4
Motif ID: 149
Motif name: asmAGRGGGCrCTGsmkc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0651255

Alignment:
DBTSCAGMGCCCTCTRST
BBVGCCBVGGCCTV----

Original motif     Consensus sequence: ASMAGAGGGCRCTGSABH Reverse complement motif     Consensus sequence: DBTSCAGMGCCCTCTRST


Dataset #: 3
Motif ID: 109
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 14
Similarity score: 0.0724025

Alignment:
DGVBCABTGDWGCGKRRCSR
--BBVGCCBVGGCCTV----

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 3
Motif ID: 82
Motif name: ESR2
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 14
Similarity score: 0.0748557

Alignment:
VHRGGTCABDBTGMCCTB
---VAGGCCBBGGCVBB-

Original motif     Consensus sequence: VHRGGTCABDBTGMCCTB Reverse complement motif     Consensus sequence: BAGGYCABHBTGACCKHV


Dataset #: 3
Motif ID: 125
Motif name: TP53
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 6
Number of overlap: 14
Similarity score: 0.0763693

Alignment:
ACATGCCCGGKCATGTCCSR
-----BBVGCCBVGGCCTV-

Original motif     Consensus sequence: MSGGACATGYCCGGGCATGT Reverse complement motif     Consensus sequence: ACATGCCCGGKCATGTCCSR


Dataset #: 4
Motif ID: 168
Motif name: yrcrGYGCCMyCTGGtG
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0830122

Alignment:
HVCAGCGCCCYCTGGTG
BBVGCCBVGGCCTV---

Original motif     Consensus sequence: HVCAGCGCCCYCTGGTG Reverse complement motif     Consensus sequence: CACCAGMGGGCGCTGBD


Dataset #: 3 Motif ID: 131 Motif name: znf143

Original motif     Consensus sequence: BAHYTCCCAKMATGCMWYGC Reverse complement motif     Consensus sequence: GCMWRGCATYRTGGGAMHTB

Best Matches for Motif ID 131 (Highest to Lowest)

Dataset #: 3
Motif ID: 70
Motif name: Ar
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.0555912

Alignment:
VRVDGGHACAVDDKGTHCTDWH
GCMWRGCATYRTGGGAMHTB--

Original motif     Consensus sequence: HWDAGHACRHHVTGTHCCHVMV Reverse complement motif     Consensus sequence: VRVDGGHACAVDDKGTHCTDWH


Dataset #: 3
Motif ID: 109
Motif name: Pax5
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 0.554242

Alignment:
DGVBCABTGDWGCGKRRCSR-
-GCMWRGCATYRTGGGAMHTB

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 3
Motif ID: 113
Motif name: REST
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 19
Similarity score: 0.558571

Alignment:
-GGYGCTGTCCATGGTGCTGAA
BAHYTCCCAKMATGCMWYGC--

Original motif     Consensus sequence: TTCAGCACCATGGACAGCKCC Reverse complement motif     Consensus sequence: GGYGCTGTCCATGGTGCTGAA


Dataset #: 3
Motif ID: 125
Motif name: TP53
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 0.566085

Alignment:
MSGGACATGYCCGGGCATGT-
-GCMWRGCATYRTGGGAMHTB

Original motif     Consensus sequence: MSGGACATGYCCGGGCATGT Reverse complement motif     Consensus sequence: ACATGCCCGGKCATGTCCSR


Dataset #: 3
Motif ID: 81
Motif name: ESR1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 18
Similarity score: 1.05907

Alignment:
VDBHMAGGTCACCCTGACCY--
--BAHYTCCCAKMATGCMWYGC

Original motif     Consensus sequence: VDBHMAGGTCACCCTGACCY Reverse complement motif     Consensus sequence: MGGTCAGGGTGACCTRDBHV


Dataset #: 3 Motif ID: 132 Motif name: ZNF354C

Original motif     Consensus sequence: MTCCAC Reverse complement motif     Consensus sequence: GTGGAY

Best Matches for Motif ID 132 (Highest to Lowest)

Dataset #: 4
Motif ID: 145
Motif name: grCCACyAGAkG
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 7
Number of overlap: 6
Similarity score: 0.0253111

Alignment:
CYTCTKGTGGHH
------GTGGAY

Original motif     Consensus sequence: DDCCACYAGAKG Reverse complement motif     Consensus sequence: CYTCTKGTGGHH


Dataset #: 4
Motif ID: 158
Motif name: grCCACwAGrk
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.0266594

Alignment:
YMCTWGTGGHH
-----GTGGAY

Original motif     Consensus sequence: DDCCACWAGRK Reverse complement motif     Consensus sequence: YMCTWGTGGHH


Dataset #: 4
Motif ID: 138
Motif name: grCCACyAGAkG
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 7
Number of overlap: 6
Similarity score: 0.0292621

Alignment:
CYTCTMGTGGHH
------GTGGAY

Original motif     Consensus sequence: DDCCACYAGAKG Reverse complement motif     Consensus sequence: CYTCTMGTGGHH


Dataset #: 3
Motif ID: 114
Motif name: RUNX1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 6
Similarity score: 0.0470937

Alignment:
BBYTGTGGTTT
-GTGGAY----

Original motif     Consensus sequence: BBYTGTGGTTT Reverse complement motif     Consensus sequence: AAACCACAKVB


Dataset #: 1
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.0507812

Alignment:
SWGCCACC
-MTCCAC-

Original motif     Consensus sequence: GGTGGCWS Reverse complement motif     Consensus sequence: SWGCCACC


Dataset #: 4 Motif ID: 133 Motif name: shAGrGGGCAgy

Original motif     Consensus sequence: SHAGRGGGCABH Reverse complement motif     Consensus sequence: DBTGCCCKCTDS

Best Matches for Motif ID 133 (Highest to Lowest)

Dataset #: 4
Motif ID: 165
Motif name: wgGCCAshAGrGGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 7
Number of overlap: 12
Similarity score: 0.00159897

Alignment:
HDGCCACHAGRGGGCRBY
------SHAGRGGGCABH

Original motif     Consensus sequence: HDGCCACHAGRGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCKCTHGTGGCHH


Dataset #: 4
Motif ID: 143
Motif name: AgmAGAGGGCrscAGak
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 12
Similarity score: 0.00815796

Alignment:
AGMAGAGGGCASCAGAK
-SHAGRGGGCABH----

Original motif     Consensus sequence: AGMAGAGGGCASCAGAK Reverse complement motif     Consensus sequence: RTCTGSTGCCCTCTYCT


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 8
Number of overlap: 12
Similarity score: 0.0109424

Alignment:
VHGGCCAGMAGAGGGCRBY
-------SHAGRGGGCABH

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 4
Motif ID: 166
Motif name: CasCAGrGGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.0124424

Alignment:
CACCAGRGGGCRSB
--SHAGRGGGCABH

Original motif     Consensus sequence: CACCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCKCTGGTG


Dataset #: 4
Motif ID: 147
Motif name: asCAGrkGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 12
Similarity score: 0.0128393

Alignment:
ASCAGRGGGCRSB
-SHAGRGGGCABH

Original motif     Consensus sequence: ASCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCMCTGST


Dataset #: 4 Motif ID: 134 Motif name: ssCGwGCGss

Original motif     Consensus sequence: BSCGWGCGBV Reverse complement motif     Consensus sequence: VBCGCWCGSB

Best Matches for Motif ID 134 (Highest to Lowest)

Dataset #: 4
Motif ID: 135
Motif name: ssCGGCCGss
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0113669

Alignment:
BSCGGCCGSV
VBCGCWCGSB

Original motif     Consensus sequence: BSCGGCCGSV Reverse complement motif     Consensus sequence: VSCGGCCGSB


Dataset #: 4
Motif ID: 161
Motif name: ssCGCwGCGss
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.0473417

Alignment:
BSCGCDGCGSV
-BSCGWGCGBV

Original motif     Consensus sequence: VSCGCDGCGSB Reverse complement motif     Consensus sequence: BSCGCDGCGSV


Dataset #: 4
Motif ID: 152
Motif name: yrCATGCAyr
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0541916

Alignment:
BRCATGCABD
BSCGWGCGBV

Original motif     Consensus sequence: BRCATGCABD Reverse complement motif     Consensus sequence: HVTGCATGKV


Dataset #: 4
Motif ID: 158
Motif name: grCCACwAGrk
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.0546634

Alignment:
DDCCACWAGRK
-VBCGCWCGSB

Original motif     Consensus sequence: DDCCACWAGRK Reverse complement motif     Consensus sequence: YMCTWGTGGHH


Dataset #: 3
Motif ID: 109
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 7
Number of overlap: 10
Similarity score: 0.0551638

Alignment:
DGVBCABTGDWGCGKRRCSR
------BSCGWGCGBV----

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 4 Motif ID: 135 Motif name: ssCGGCCGss

Original motif     Consensus sequence: BSCGGCCGSV Reverse complement motif     Consensus sequence: VSCGGCCGSB

Best Matches for Motif ID 135 (Highest to Lowest)

Dataset #: 4
Motif ID: 134
Motif name: ssCGwGCGss
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0

Alignment:
BSCGWGCGBV
VSCGGCCGSB

Original motif     Consensus sequence: BSCGWGCGBV Reverse complement motif     Consensus sequence: VBCGCWCGSB


Dataset #: 4
Motif ID: 171
Motif name: ysGTGGCCACsr
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.0413265

Alignment:
BVGTGGCCACBV
-VSCGGCCGSB-

Original motif     Consensus sequence: BVGTGGCCACBV Reverse complement motif     Consensus sequence: VBGTGGCCACVB


Dataset #: 3
Motif ID: 82
Motif name: ESR2
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0424008

Alignment:
BAGGYCABHBTGACCKHV
--------VSCGGCCGSB

Original motif     Consensus sequence: VHRGGTCABDBTGMCCTB Reverse complement motif     Consensus sequence: BAGGYCABHBTGACCKHV


Dataset #: 3
Motif ID: 111
Motif name: PPARG
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.046338

Alignment:
ABTMGGTCACBGTGACCTAS
-VSCGGCCGSB---------

Original motif     Consensus sequence: STAGGTCACBGTGACCYABT Reverse complement motif     Consensus sequence: ABTMGGTCACBGTGACCTAS


Dataset #: 3
Motif ID: 81
Motif name: ESR1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 8
Number of overlap: 10
Similarity score: 0.0468951

Alignment:
MGGTCAGGGTGACCTRDBHV
-------VSCGGCCGSB---

Original motif     Consensus sequence: VDBHMAGGTCACCCTGACCY Reverse complement motif     Consensus sequence: MGGTCAGGGTGACCTRDBHV


Dataset #: 4 Motif ID: 136 Motif name: dwCAGAAGwh

Original motif     Consensus sequence: DHCAGAAGDH Reverse complement motif     Consensus sequence: HDCTTCTGHD

Best Matches for Motif ID 136 (Highest to Lowest)

Dataset #: 4
Motif ID: 151
Motif name: agrCCAGmAGrg
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 10
Similarity score: 0.00562474

Alignment:
HVGCCAGMAGRG
--DHCAGAAGDH

Original motif     Consensus sequence: HVGCCAGMAGRG Reverse complement motif     Consensus sequence: CKCTRCTGGCVH


Dataset #: 4
Motif ID: 141
Motif name: raCAAAACam
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0107169

Alignment:
DACAAAACAH
DHCAGAAGDH

Original motif     Consensus sequence: DACAAAACAH Reverse complement motif     Consensus sequence: HTGTTTTGTD


Dataset #: 4
Motif ID: 158
Motif name: grCCACwAGrk
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0167426

Alignment:
DDCCACWAGRK
-DHCAGAAGDH

Original motif     Consensus sequence: DDCCACWAGRK Reverse complement motif     Consensus sequence: YMCTWGTGGHH


Dataset #: 4
Motif ID: 139
Motif name: mkCTyTTCsg
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0207259

Alignment:
HBCTTTTCBD
HDCTTCTGHD

Original motif     Consensus sequence: HBCTTTTCBD Reverse complement motif     Consensus sequence: HBGAAAAGBD


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 10
Similarity score: 0.0212719

Alignment:
VHGGCCAGMAGAGGGCRBY
---DHCAGAAGDH------

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 4 Motif ID: 137 Motif name: rgCGCCmyCTgs

Original motif     Consensus sequence: VGCGCCCYCTDS Reverse complement motif     Consensus sequence: SHAGKGGGCGCB

Best Matches for Motif ID 137 (Highest to Lowest)

Dataset #: 4
Motif ID: 153
Motif name: scAGrkGGCGcy
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0

Alignment:
VGCGCCCMCTDS
VGCGCCCYCTDS

Original motif     Consensus sequence: SHAGRGGGCGCB Reverse complement motif     Consensus sequence: VGCGCCCMCTDS


Dataset #: 4
Motif ID: 156
Motif name: rgyGCCMyCTksTGGccd
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 7
Number of overlap: 12
Similarity score: 0.00894839

Alignment:
RVYGCCCYCTKSTGGCHD
VGCGCCCYCTDS------

Original motif     Consensus sequence: RVYGCCCYCTKSTGGCHD Reverse complement motif     Consensus sequence: DDGCCASYAGMGGGCKVM


Dataset #: 4
Motif ID: 168
Motif name: yrcrGYGCCMyCTGGtG
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 12
Similarity score: 0.0183868

Alignment:
HVCAGCGCCCYCTGGTG
---VGCGCCCYCTDS--

Original motif     Consensus sequence: HVCAGCGCCCYCTGGTG Reverse complement motif     Consensus sequence: CACCAGMGGGCGCTGBD


Dataset #: 4
Motif ID: 146
Motif name: myrGYGCCmCCTast
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 12
Similarity score: 0.0261893

Alignment:
VBAGCGCCMCCTAST
--VGCGCCCYCTDS-

Original motif     Consensus sequence: VBAGCGCCMCCTAST Reverse complement motif     Consensus sequence: ASTAGGYGGCGCTBB


Dataset #: 4
Motif ID: 147
Motif name: asCAGrkGGCrsy
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.0284224

Alignment:
ASCAGRGGGCRSB
-SHAGKGGGCGCB

Original motif     Consensus sequence: ASCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCMCTGST


Dataset #: 4 Motif ID: 138 Motif name: grCCACyAGAkG

Original motif     Consensus sequence: DDCCACYAGAKG Reverse complement motif     Consensus sequence: CYTCTMGTGGHH

Best Matches for Motif ID 138 (Highest to Lowest)

Dataset #: 4
Motif ID: 145
Motif name: grCCACyAGAkG
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0

Alignment:
DDCCACYAGAKG
DDCCACYAGAKG

Original motif     Consensus sequence: DDCCACYAGAKG Reverse complement motif     Consensus sequence: CYTCTKGTGGHH


Dataset #: 4
Motif ID: 165
Motif name: wgGCCAshAGrGGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 12
Similarity score: 0.0317718

Alignment:
HDGCCACHAGRGGGCRBY
-DDCCACYAGAKG-----

Original motif     Consensus sequence: HDGCCACHAGRGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCKCTHGTGGCHH


Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 7
Number of overlap: 12
Similarity score: 0.0332329

Alignment:
YDRCCASYAGRKGGCRSYV
-DDCCACYAGAKG------

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 4
Motif ID: 156
Motif name: rgyGCCMyCTksTGGccd
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 6
Number of overlap: 12
Similarity score: 0.0390921

Alignment:
DDGCCASYAGMGGGCKVM
-DDCCACYAGAKG-----

Original motif     Consensus sequence: RVYGCCCYCTKSTGGCHD Reverse complement motif     Consensus sequence: DDGCCASYAGMGGGCKVM


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 12
Similarity score: 0.0478776

Alignment:
KBKGCCCTCTYCTGGCCHV
-----CYTCTMGTGGHH--

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 4 Motif ID: 139 Motif name: mkCTyTTCsg

Original motif     Consensus sequence: HBCTTTTCBD Reverse complement motif     Consensus sequence: HBGAAAAGBD

Best Matches for Motif ID 139 (Highest to Lowest)

Dataset #: 4
Motif ID: 140
Motif name: vkCKCTkCGk
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.000582108

Alignment:
VDCTCTKCGB
HBCTTTTCBD

Original motif     Consensus sequence: VDCTCTKCGB Reverse complement motif     Consensus sequence: BCGYAGAGDV


Dataset #: 3
Motif ID: 113
Motif name: REST
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 10
Number of overlap: 10
Similarity score: 0.0260893

Alignment:
GGYGCTGTCCATGGTGCTGAA
---------HBCTTTTCBD--

Original motif     Consensus sequence: TTCAGCACCATGGACAGCKCC Reverse complement motif     Consensus sequence: GGYGCTGTCCATGGTGCTGAA


Dataset #: 4
Motif ID: 136
Motif name: dwCAGAAGwh
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0271307

Alignment:
DHCAGAAGDH
HBGAAAAGBD

Original motif     Consensus sequence: DHCAGAAGDH Reverse complement motif     Consensus sequence: HDCTTCTGHD


Dataset #: 4
Motif ID: 142
Motif name: ctCTTAACyw
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0279851

Alignment:
HHCTTAACHD
HBCTTTTCBD

Original motif     Consensus sequence: HHCTTAACHD Reverse complement motif     Consensus sequence: DDGTTAAGHD


Dataset #: 4
Motif ID: 141
Motif name: raCAAAACam
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0368067

Alignment:
HTGTTTTGTD
HBCTTTTCBD

Original motif     Consensus sequence: DACAAAACAH Reverse complement motif     Consensus sequence: HTGTTTTGTD


Dataset #: 4 Motif ID: 140 Motif name: vkCKCTkCGk

Original motif     Consensus sequence: VDCTCTKCGB Reverse complement motif     Consensus sequence: BCGYAGAGDV

Best Matches for Motif ID 140 (Highest to Lowest)

Dataset #: 4
Motif ID: 139
Motif name: mkCTyTTCsg
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.00351595

Alignment:
HBCTTTTCBD
VDCTCTKCGB

Original motif     Consensus sequence: HBCTTTTCBD Reverse complement motif     Consensus sequence: HBGAAAAGBD


Dataset #: 4
Motif ID: 161
Motif name: ssCGCwGCGss
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.0202536

Alignment:
VSCGCDGCGSB
VDCTCTKCGB-

Original motif     Consensus sequence: VSCGCDGCGSB Reverse complement motif     Consensus sequence: BSCGCDGCGSV


Dataset #: 4
Motif ID: 170
Motif name: ssGGCrsTGCrs
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0403601

Alignment:
VVGGCRSTGCVB
--VDCTCTKCGB

Original motif     Consensus sequence: VVGGCRSTGCVB Reverse complement motif     Consensus sequence: BVGCASMGCCVV


Dataset #: 4
Motif ID: 154
Motif name: csCsCCTCCcc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.0407996

Alignment:
VBCCCCTCCHB
VDCTCTKCGB-

Original motif     Consensus sequence: VBCCCCTCCHB Reverse complement motif     Consensus sequence: BDGGAGGGGBV


Dataset #: 3
Motif ID: 109
Motif name: Pax5
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 7
Number of overlap: 10
Similarity score: 0.0447624

Alignment:
DGVBCABTGDWGCGKRRCSR
----BCGYAGAGDV------

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 4 Motif ID: 141 Motif name: raCAAAACam

Original motif     Consensus sequence: DACAAAACAH Reverse complement motif     Consensus sequence: HTGTTTTGTD

Best Matches for Motif ID 141 (Highest to Lowest)

Dataset #: 4
Motif ID: 136
Motif name: dwCAGAAGwh
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0286451

Alignment:
DHCAGAAGDH
DACAAAACAH

Original motif     Consensus sequence: DHCAGAAGDH Reverse complement motif     Consensus sequence: HDCTTCTGHD


Dataset #: 4
Motif ID: 142
Motif name: ctCTTAACyw
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0383253

Alignment:
DDGTTAAGHD
HTGTTTTGTD

Original motif     Consensus sequence: HHCTTAACHD Reverse complement motif     Consensus sequence: DDGTTAAGHD


Dataset #: 4
Motif ID: 148
Motif name: wwTwAAAAww
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0458158

Alignment:
DDTWAAAAHH
DACAAAACAH

Original motif     Consensus sequence: DDTWAAAAHH Reverse complement motif     Consensus sequence: HHTTTTWADD


Dataset #: 4
Motif ID: 157
Motif name: wtATTTTTAww
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.0464408

Alignment:
WWTAAAAATAD
-DACAAAACAH

Original motif     Consensus sequence: DTATTTTTAWW Reverse complement motif     Consensus sequence: WWTAAAAATAD


Dataset #: 4
Motif ID: 139
Motif name: mkCTyTTCsg
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0483302

Alignment:
HBGAAAAGBD
DACAAAACAH

Original motif     Consensus sequence: HBCTTTTCBD Reverse complement motif     Consensus sequence: HBGAAAAGBD


Dataset #: 4 Motif ID: 142 Motif name: ctCTTAACyw

Original motif     Consensus sequence: HHCTTAACHD Reverse complement motif     Consensus sequence: DDGTTAAGHD

Best Matches for Motif ID 142 (Highest to Lowest)

Dataset #: 4
Motif ID: 141
Motif name: raCAAAACam
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0459536

Alignment:
HTGTTTTGTD
DDGTTAAGHD

Original motif     Consensus sequence: DACAAAACAH Reverse complement motif     Consensus sequence: HTGTTTTGTD


Dataset #: 4
Motif ID: 139
Motif name: mkCTyTTCsg
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0471369

Alignment:
HBCTTTTCBD
HHCTTAACHD

Original motif     Consensus sequence: HBCTTTTCBD Reverse complement motif     Consensus sequence: HBGAAAAGBD


Dataset #: 4
Motif ID: 136
Motif name: dwCAGAAGwh
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0550541

Alignment:
DHCAGAAGDH
DDGTTAAGHD

Original motif     Consensus sequence: DHCAGAAGDH Reverse complement motif     Consensus sequence: HDCTTCTGHD


Dataset #: 3
Motif ID: 83
Motif name: Esrrb
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0663739

Alignment:
VBBYCAAGGTCA
--DDGTTAAGHD

Original motif     Consensus sequence: VBBYCAAGGTCA Reverse complement motif     Consensus sequence: TGACCTTGMBBB


Dataset #: 3
Motif ID: 82
Motif name: ESR2
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.0691225

Alignment:
BAGGYCABHBTGACCKHV
-HHCTTAACHD-------

Original motif     Consensus sequence: VHRGGTCABDBTGMCCTB Reverse complement motif     Consensus sequence: BAGGYCABHBTGACCKHV


Dataset #: 4 Motif ID: 143 Motif name: AgmAGAGGGCrscAGak

Original motif     Consensus sequence: AGMAGAGGGCASCAGAK Reverse complement motif     Consensus sequence: RTCTGSTGCCCTCTYCT

Best Matches for Motif ID 143 (Highest to Lowest)

Dataset #: 4
Motif ID: 149
Motif name: asmAGRGGGCrCTGsmkc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 17
Similarity score: 0.0311468

Alignment:
ASMAGAGGGCRCTGSABH
AGMAGAGGGCASCAGAK-

Original motif     Consensus sequence: ASMAGAGGGCRCTGSABH Reverse complement motif     Consensus sequence: DBTSCAGMGCCCTCTRST


Dataset #: 4
Motif ID: 144
Motif name: ctCTrsyGCCmCCTast
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 17
Similarity score: 0.0415124

Alignment:
HDCTGSYGCCMCCTAST
RTCTGSTGCCCTCTYCT

Original motif     Consensus sequence: HDCTGSYGCCMCCTAST Reverse complement motif     Consensus sequence: ASTAGGYGGCMSCAGDD


Dataset #: 4
Motif ID: 167
Motif name: rsyAGrkGGCGCCmyCTrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 17
Similarity score: 0.0702327

Alignment:
DSYAGRKGGCGCCMYCTRSH
AGMAGAGGGCASCAGAK---

Original motif     Consensus sequence: DSYAGRKGGCGCCMYCTRSH Reverse complement motif     Consensus sequence: HSKAGKYGGCGCCRMCTMSD


Dataset #: 3
Motif ID: 81
Motif name: ESR1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 17
Similarity score: 0.0915393

Alignment:
VDBHMAGGTCACCCTGACCY
AGMAGAGGGCASCAGAK---

Original motif     Consensus sequence: VDBHMAGGTCACCCTGACCY Reverse complement motif     Consensus sequence: MGGTCAGGGTGACCTRDBHV


Dataset #: 4
Motif ID: 164
Motif name: asyAGrkGGCRGCAga
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 16
Similarity score: 0.531077

Alignment:
ASYAGRKGGCAGCABH-
AGMAGAGGGCASCAGAK

Original motif     Consensus sequence: ASYAGRKGGCAGCABH Reverse complement motif     Consensus sequence: HBTGCTGCCYMCTKST


Dataset #: 4 Motif ID: 144 Motif name: ctCTrsyGCCmCCTast

Original motif     Consensus sequence: HDCTGSYGCCMCCTAST Reverse complement motif     Consensus sequence: ASTAGGYGGCMSCAGDD

Best Matches for Motif ID 144 (Highest to Lowest)

Dataset #: 4
Motif ID: 143
Motif name: AgmAGAGGGCrscAGak
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 17
Similarity score: 0.0216483

Alignment:
AGMAGAGGGCASCAGAK
ASTAGGYGGCMSCAGDD

Original motif     Consensus sequence: AGMAGAGGGCASCAGAK Reverse complement motif     Consensus sequence: RTCTGSTGCCCTCTYCT


Dataset #: 4
Motif ID: 167
Motif name: rsyAGrkGGCGCCmyCTrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 17
Similarity score: 0.0316423

Alignment:
DSYAGRKGGCGCCMYCTRSH
---HDCTGSYGCCMCCTAST

Original motif     Consensus sequence: DSYAGRKGGCGCCMYCTRSH Reverse complement motif     Consensus sequence: HSKAGKYGGCGCCRMCTMSD


Dataset #: 4
Motif ID: 149
Motif name: asmAGRGGGCrCTGsmkc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 17
Similarity score: 0.040379

Alignment:
DBTSCAGMGCCCTCTRST
-HDCTGSYGCCMCCTAST

Original motif     Consensus sequence: ASMAGAGGGCRCTGSABH Reverse complement motif     Consensus sequence: DBTSCAGMGCCCTCTRST


Dataset #: 3
Motif ID: 81
Motif name: ESR1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 17
Similarity score: 0.0748345

Alignment:
MGGTCAGGGTGACCTRDBHV
---ASTAGGYGGCMSCAGDD

Original motif     Consensus sequence: VDBHMAGGTCACCCTGACCY Reverse complement motif     Consensus sequence: MGGTCAGGGTGACCTRDBHV


Dataset #: 4
Motif ID: 164
Motif name: asyAGrkGGCRGCAga
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 16
Similarity score: 0.503247

Alignment:
ASYAGRKGGCAGCABH-
ASTAGGYGGCMSCAGDD

Original motif     Consensus sequence: ASYAGRKGGCAGCABH Reverse complement motif     Consensus sequence: HBTGCTGCCYMCTKST


Dataset #: 4 Motif ID: 145 Motif name: grCCACyAGAkG

Original motif     Consensus sequence: DDCCACYAGAKG Reverse complement motif     Consensus sequence: CYTCTKGTGGHH

Best Matches for Motif ID 145 (Highest to Lowest)

Dataset #: 4
Motif ID: 138
Motif name: grCCACyAGAkG
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0

Alignment:
DDCCACYAGAKG
DDCCACYAGAKG

Original motif     Consensus sequence: DDCCACYAGAKG Reverse complement motif     Consensus sequence: CYTCTMGTGGHH


Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 12
Similarity score: 0.0323771

Alignment:
YDRCCASYAGRKGGCRSYV
-DDCCACYAGAKG------

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 4
Motif ID: 165
Motif name: wgGCCAshAGrGGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 6
Number of overlap: 12
Similarity score: 0.0347955

Alignment:
HDGCCACHAGRGGGCRBY
-DDCCACYAGAKG-----

Original motif     Consensus sequence: HDGCCACHAGRGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCKCTHGTGGCHH


Dataset #: 4
Motif ID: 156
Motif name: rgyGCCMyCTksTGGccd
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 6
Number of overlap: 12
Similarity score: 0.0388427

Alignment:
DDGCCASYAGMGGGCKVM
-DDCCACYAGAKG-----

Original motif     Consensus sequence: RVYGCCCYCTKSTGGCHD Reverse complement motif     Consensus sequence: DDGCCASYAGMGGGCKVM


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 12
Similarity score: 0.0502736

Alignment:
VHGGCCAGMAGAGGGCRBY
--DDCCACYAGAKG-----

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 4 Motif ID: 146 Motif name: myrGYGCCmCCTast

Original motif     Consensus sequence: VBAGCGCCMCCTAST Reverse complement motif     Consensus sequence: ASTAGGYGGCGCTBB

Best Matches for Motif ID 146 (Highest to Lowest)

Dataset #: 4
Motif ID: 168
Motif name: yrcrGYGCCMyCTGGtG
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 15
Similarity score: 0.00670638

Alignment:
HVCAGCGCCCYCTGGTG
-VBAGCGCCMCCTAST-

Original motif     Consensus sequence: HVCAGCGCCCYCTGGTG Reverse complement motif     Consensus sequence: CACCAGMGGGCGCTGBD


Dataset #: 4
Motif ID: 144
Motif name: ctCTrsyGCCmCCTast
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 15
Similarity score: 0.0118351

Alignment:
HDCTGSYGCCMCCTAST
--VBAGCGCCMCCTAST

Original motif     Consensus sequence: HDCTGSYGCCMCCTAST Reverse complement motif     Consensus sequence: ASTAGGYGGCMSCAGDD


Dataset #: 4
Motif ID: 167
Motif name: rsyAGrkGGCGCCmyCTrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 6
Number of overlap: 15
Similarity score: 0.0178333

Alignment:
DSYAGRKGGCGCCMYCTRSH
-----VBAGCGCCMCCTAST

Original motif     Consensus sequence: DSYAGRKGGCGCCMYCTRSH Reverse complement motif     Consensus sequence: HSKAGKYGGCGCCRMCTMSD


Dataset #: 4
Motif ID: 149
Motif name: asmAGRGGGCrCTGsmkc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 15
Similarity score: 0.0324399

Alignment:
DBTSCAGMGCCCTCTRST
---VBAGCGCCMCCTAST

Original motif     Consensus sequence: ASMAGAGGGCRCTGSABH Reverse complement motif     Consensus sequence: DBTSCAGMGCCCTCTRST


Dataset #: 4
Motif ID: 169
Motif name: yvTGCyGCCmCCwGgtG
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 15
Similarity score: 0.0457506

Alignment:
BVTGCTGCCACCWGGDG
-VBAGCGCCMCCTAST-

Original motif     Consensus sequence: BVTGCTGCCACCWGGDG Reverse complement motif     Consensus sequence: CDCCWGGTGGCAGCAVV


Dataset #: 4 Motif ID: 147 Motif name: asCAGrkGGCrsy

Original motif     Consensus sequence: ASCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCMCTGST

Best Matches for Motif ID 147 (Highest to Lowest)

Dataset #: 4
Motif ID: 166
Motif name: CasCAGrGGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 13
Similarity score: 0.00871755

Alignment:
CACCAGRGGGCRSB
-ASCAGRGGGCRSB

Original motif     Consensus sequence: CACCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCKCTGGTG


Dataset #: 4
Motif ID: 165
Motif name: wgGCCAshAGrGGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 13
Similarity score: 0.0301924

Alignment:
HDGCCACHAGRGGGCRBY
-----ASCAGRGGGCRSB

Original motif     Consensus sequence: HDGCCACHAGRGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCKCTHGTGGCHH


Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 6
Number of overlap: 13
Similarity score: 0.0305318

Alignment:
YDRCCASYAGRKGGCRSYV
-----ASCAGRGGGCRSB-

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 4
Motif ID: 143
Motif name: AgmAGAGGGCrscAGak
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 13
Similarity score: 0.0348963

Alignment:
AGMAGAGGGCASCAGAK
ASCAGRGGGCRSB----

Original motif     Consensus sequence: AGMAGAGGGCASCAGAK Reverse complement motif     Consensus sequence: RTCTGSTGCCCTCTYCT


Dataset #: 4
Motif ID: 164
Motif name: asyAGrkGGCRGCAga
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 13
Similarity score: 0.0366623

Alignment:
HBTGCTGCCYMCTKST
---BSKGCCCMCTGST

Original motif     Consensus sequence: ASYAGRKGGCAGCABH Reverse complement motif     Consensus sequence: HBTGCTGCCYMCTKST


Dataset #: 4 Motif ID: 148 Motif name: wwTwAAAAww

Original motif     Consensus sequence: DDTWAAAAHH Reverse complement motif     Consensus sequence: HHTTTTWADD

Best Matches for Motif ID 148 (Highest to Lowest)

Dataset #: 4
Motif ID: 157
Motif name: wtATTTTTAww
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.0143677

Alignment:
WWTAAAAATAD
DDTWAAAAHH-

Original motif     Consensus sequence: DTATTTTTAWW Reverse complement motif     Consensus sequence: WWTAAAAATAD


Dataset #: 4
Motif ID: 150
Motif name: waATwAAAATAww
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 10
Similarity score: 0.0146704

Alignment:
DHATWAAAATAHD
-DDTWAAAAHH--

Original motif     Consensus sequence: DHATWAAAATAHD Reverse complement motif     Consensus sequence: DHTATTTTWATHD


Dataset #: 2
Motif ID: 68
Motif name: Motif 68
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 10
Similarity score: 0.0466767

Alignment:
WAAWAAAWAWWWAA
-DDTWAAAAHH---

Original motif     Consensus sequence: WAAWAAAWAWWWAA Reverse complement motif     Consensus sequence: TTWWWTWTTTWTTW


Dataset #: 4
Motif ID: 141
Motif name: raCAAAACam
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0504274

Alignment:
DACAAAACAH
DDTWAAAAHH

Original motif     Consensus sequence: DACAAAACAH Reverse complement motif     Consensus sequence: HTGTTTTGTD


Dataset #: 4
Motif ID: 142
Motif name: ctCTTAACyw
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0669752

Alignment:
HHCTTAACHD
DDTWAAAAHH

Original motif     Consensus sequence: HHCTTAACHD Reverse complement motif     Consensus sequence: DDGTTAAGHD


Dataset #: 4 Motif ID: 149 Motif name: asmAGRGGGCrCTGsmkc

Original motif     Consensus sequence: ASMAGAGGGCRCTGSABH Reverse complement motif     Consensus sequence: DBTSCAGMGCCCTCTRST

Best Matches for Motif ID 149 (Highest to Lowest)

Dataset #: 4
Motif ID: 167
Motif name: rsyAGrkGGCGCCmyCTrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 18
Similarity score: 0.0599593

Alignment:
DSYAGRKGGCGCCMYCTRSH
ASMAGAGGGCRCTGSABH--

Original motif     Consensus sequence: DSYAGRKGGCGCCMYCTRSH Reverse complement motif     Consensus sequence: HSKAGKYGGCGCCRMCTMSD


Dataset #: 3
Motif ID: 81
Motif name: ESR1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 18
Similarity score: 0.0884279

Alignment:
VDBHMAGGTCACCCTGACCY
--DBTSCAGMGCCCTCTRST

Original motif     Consensus sequence: VDBHMAGGTCACCCTGACCY Reverse complement motif     Consensus sequence: MGGTCAGGGTGACCTRDBHV


Dataset #: 3
Motif ID: 113
Motif name: REST
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 18
Similarity score: 0.0932033

Alignment:
GGYGCTGTCCATGGTGCTGAA
DBTSCAGMGCCCTCTRST---

Original motif     Consensus sequence: TTCAGCACCATGGACAGCKCC Reverse complement motif     Consensus sequence: GGYGCTGTCCATGGTGCTGAA


Dataset #: 3
Motif ID: 70
Motif name: Ar
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 18
Similarity score: 0.0976041

Alignment:
HWDAGHACRHHVTGTHCCHVMV
ASMAGAGGGCRCTGSABH----

Original motif     Consensus sequence: HWDAGHACRHHVTGTHCCHVMV Reverse complement motif     Consensus sequence: VRVDGGHACAVDDKGTHCTDWH


Dataset #: 4
Motif ID: 143
Motif name: AgmAGAGGGCrscAGak
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 17
Similarity score: 0.529694

Alignment:
AGMAGAGGGCASCAGAK-
ASMAGAGGGCRCTGSABH

Original motif     Consensus sequence: AGMAGAGGGCASCAGAK Reverse complement motif     Consensus sequence: RTCTGSTGCCCTCTYCT


Dataset #: 4 Motif ID: 150 Motif name: waATwAAAATAww

Original motif     Consensus sequence: DHATWAAAATAHD Reverse complement motif     Consensus sequence: DHTATTTTWATHD

Best Matches for Motif ID 150 (Highest to Lowest)

Dataset #: 2
Motif ID: 68
Motif name: Motif 68
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 13
Similarity score: 0.0403377

Alignment:
TTWWWTWTTTWTTW
-DHTATTTTWATHD

Original motif     Consensus sequence: WAAWAAAWAWWWAA Reverse complement motif     Consensus sequence: TTWWWTWTTTWTTW


Dataset #: 3
Motif ID: 70
Motif name: Ar
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 10
Number of overlap: 13
Similarity score: 0.0805462

Alignment:
HWDAGHACRHHVTGTHCCHVMV
DHATWAAAATAHD---------

Original motif     Consensus sequence: HWDAGHACRHHVTGTHCCHVMV Reverse complement motif     Consensus sequence: VRVDGGHACAVDDKGTHCTDWH


Dataset #: 3
Motif ID: 87
Motif name: HNF4A
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 13
Similarity score: 0.081608

Alignment:
RGGBCAAAGKYCA
DHATWAAAATAHD

Original motif     Consensus sequence: RGGBCAAAGKYCA Reverse complement motif     Consensus sequence: TGMYCTTTGBCCK


Dataset #: 3
Motif ID: 104
Motif name: NFYA
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 13
Similarity score: 0.0831397

Alignment:
BHVCKSATTGGMKBVV
--DHTATTTTWATHD-

Original motif     Consensus sequence: VBBRRCCAATSRGVDB Reverse complement motif     Consensus sequence: BHVCKSATTGGMKBVV


Dataset #: 3
Motif ID: 107
Motif name: NR2F1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 13
Similarity score: 0.0856949

Alignment:
TGAMCTTTGMMCYT
DHTATTTTWATHD-

Original motif     Consensus sequence: TGAMCTTTGMMCYT Reverse complement motif     Consensus sequence: AKGYYCAAAGRTCA


Dataset #: 4 Motif ID: 151 Motif name: agrCCAGmAGrg

Original motif     Consensus sequence: HVGCCAGMAGRG Reverse complement motif     Consensus sequence: CKCTRCTGGCVH

Best Matches for Motif ID 151 (Highest to Lowest)

Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 12
Similarity score: 0.00116274

Alignment:
VHGGCCAGMAGAGGGCRBY
-HVGCCAGMAGRG------

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 4
Motif ID: 165
Motif name: wgGCCAshAGrGGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.0104581

Alignment:
HDGCCACHAGRGGGCRBY
HVGCCAGMAGRG------

Original motif     Consensus sequence: HDGCCACHAGRGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCKCTHGTGGCHH


Dataset #: 4
Motif ID: 156
Motif name: rgyGCCMyCTksTGGccd
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.0140707

Alignment:
RVYGCCCYCTKSTGGCHD
------CKCTRCTGGCVH

Original motif     Consensus sequence: RVYGCCCYCTKSTGGCHD Reverse complement motif     Consensus sequence: DDGCCASYAGMGGGCKVM


Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.0214576

Alignment:
YDRCCASYAGRKGGCRSYV
HVGCCAGMAGRG-------

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 4
Motif ID: 143
Motif name: AgmAGAGGGCrscAGak
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 6
Number of overlap: 12
Similarity score: 0.0481806

Alignment:
AGMAGAGGGCASCAGAK
-----HVGCCAGMAGRG

Original motif     Consensus sequence: AGMAGAGGGCASCAGAK Reverse complement motif     Consensus sequence: RTCTGSTGCCCTCTYCT


Dataset #: 4 Motif ID: 152 Motif name: yrCATGCAyr

Original motif     Consensus sequence: BRCATGCABD Reverse complement motif     Consensus sequence: HVTGCATGKV

Best Matches for Motif ID 152 (Highest to Lowest)

Dataset #: 3
Motif ID: 75
Motif name: Ddit3Cebpa
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.0420406

Alignment:
VDRTGCAATMCC
-HVTGCATGKV-

Original motif     Consensus sequence: VDRTGCAATMCC Reverse complement motif     Consensus sequence: GGRATTGCAKHB


Dataset #: 3
Motif ID: 125
Motif name: TP53
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 10
Similarity score: 0.0472223

Alignment:
ACATGCCCGGKCATGTCCSR
-------HVTGCATGKV---

Original motif     Consensus sequence: MSGGACATGYCCGGGCATGT Reverse complement motif     Consensus sequence: ACATGCCCGGKCATGTCCSR


Dataset #: 4
Motif ID: 134
Motif name: ssCGwGCGss
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.055087

Alignment:
BSCGWGCGBV
BRCATGCABD

Original motif     Consensus sequence: BSCGWGCGBV Reverse complement motif     Consensus sequence: VBCGCWCGSB


Dataset #: 3
Motif ID: 131
Motif name: znf143
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0551971

Alignment:
GCMWRGCATYRTGGGAMHTB
----------BRCATGCABD

Original motif     Consensus sequence: BAHYTCCCAKMATGCMWYGC Reverse complement motif     Consensus sequence: GCMWRGCATYRTGGGAMHTB


Dataset #: 4
Motif ID: 159
Motif name: kkAAGAGCAsy
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0606344

Alignment:
HVTGCTCTTBH
HVTGCATGKV-

Original motif     Consensus sequence: DBAAGAGCAVH Reverse complement motif     Consensus sequence: HVTGCTCTTBH


Dataset #: 4 Motif ID: 153 Motif name: scAGrkGGCGcy

Original motif     Consensus sequence: SHAGRGGGCGCB Reverse complement motif     Consensus sequence: VGCGCCCMCTDS

Best Matches for Motif ID 153 (Highest to Lowest)

Dataset #: 4
Motif ID: 137
Motif name: rgCGCCmyCTgs
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0

Alignment:
VGCGCCCYCTDS
VGCGCCCMCTDS

Original motif     Consensus sequence: VGCGCCCYCTDS Reverse complement motif     Consensus sequence: SHAGKGGGCGCB


Dataset #: 4
Motif ID: 147
Motif name: asCAGrkGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 12
Similarity score: 0.0112071

Alignment:
ASCAGRGGGCRSB
-SHAGRGGGCGCB

Original motif     Consensus sequence: ASCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCMCTGST


Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 7
Number of overlap: 12
Similarity score: 0.0133899

Alignment:
BMSMGCCYMCTKSTGGMHM
-VGCGCCCMCTDS------

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 4
Motif ID: 165
Motif name: wgGCCAshAGrGGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.0146442

Alignment:
HDGCCACHAGRGGGCRBY
------SHAGRGGGCGCB

Original motif     Consensus sequence: HDGCCACHAGRGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCKCTHGTGGCHH


Dataset #: 4
Motif ID: 166
Motif name: CasCAGrGGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 12
Similarity score: 0.0200811

Alignment:
CACCAGRGGGCRSB
--SHAGRGGGCGCB

Original motif     Consensus sequence: CACCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCKCTGGTG


Dataset #: 4 Motif ID: 154 Motif name: csCsCCTCCcc

Original motif     Consensus sequence: VBCCCCTCCHB Reverse complement motif     Consensus sequence: BDGGAGGGGBV

Best Matches for Motif ID 154 (Highest to Lowest)

Dataset #: 4
Motif ID: 155
Motif name: csCSCCdCCCcs
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0

Alignment:
VBCCCCDCCCHV
VBCCCCTCCHB-

Original motif     Consensus sequence: VBCCCCDCCCHV Reverse complement motif     Consensus sequence: VDGGGDGGGGBV


Dataset #: 4
Motif ID: 153
Motif name: scAGrkGGCGcy
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0415573

Alignment:
SHAGRGGGCGCB
BDGGAGGGGBV-

Original motif     Consensus sequence: SHAGRGGGCGCB Reverse complement motif     Consensus sequence: VGCGCCCMCTDS


Dataset #: 4
Motif ID: 137
Motif name: rgCGCCmyCTgs
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0446252

Alignment:
SHAGKGGGCGCB
-BDGGAGGGGBV

Original motif     Consensus sequence: VGCGCCCYCTDS Reverse complement motif     Consensus sequence: SHAGKGGGCGCB


Dataset #: 4
Motif ID: 162
Motif name: ccAsCCCCAcc
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.049712

Alignment:
DBTGGGGSTVD
BDGGAGGGGBV

Original motif     Consensus sequence: HVASCCCCABH Reverse complement motif     Consensus sequence: DBTGGGGSTVD


Dataset #: 4
Motif ID: 143
Motif name: AgmAGAGGGCrscAGak
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.0533559

Alignment:
AGMAGAGGGCASCAGAK
-----BDGGAGGGGBV-

Original motif     Consensus sequence: AGMAGAGGGCASCAGAK Reverse complement motif     Consensus sequence: RTCTGSTGCCCTCTYCT


Dataset #: 4 Motif ID: 155 Motif name: csCSCCdCCCcs

Original motif     Consensus sequence: VBCCCCDCCCHV Reverse complement motif     Consensus sequence: VDGGGDGGGGBV

Best Matches for Motif ID 155 (Highest to Lowest)

Dataset #: 4
Motif ID: 137
Motif name: rgCGCCmyCTgs
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.0604731

Alignment:
SHAGKGGGCGCB
VDGGGDGGGGBV

Original motif     Consensus sequence: VGCGCCCYCTDS Reverse complement motif     Consensus sequence: SHAGKGGGCGCB


Dataset #: 4
Motif ID: 153
Motif name: scAGrkGGCGcy
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.0624586

Alignment:
VGCGCCCMCTDS
VBCCCCDCCCHV

Original motif     Consensus sequence: SHAGRGGGCGCB Reverse complement motif     Consensus sequence: VGCGCCCMCTDS


Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 12
Similarity score: 0.0800509

Alignment:
BMSMGCCYMCTKSTGGMHM
------VBCCCCDCCCHV-

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 4
Motif ID: 168
Motif name: yrcrGYGCCMyCTGGtG
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 6
Number of overlap: 12
Similarity score: 0.0810683

Alignment:
HVCAGCGCCCYCTGGTG
VBCCCCDCCCHV-----

Original motif     Consensus sequence: HVCAGCGCCCYCTGGTG Reverse complement motif     Consensus sequence: CACCAGMGGGCGCTGBD


Dataset #: 4
Motif ID: 147
Motif name: asCAGrkGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.0823049

Alignment:
BSKGCCCMCTGST
-VBCCCCDCCCHV

Original motif     Consensus sequence: ASCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCMCTGST


Dataset #: 4 Motif ID: 156 Motif name: rgyGCCMyCTksTGGccd

Original motif     Consensus sequence: RVYGCCCYCTKSTGGCHD Reverse complement motif     Consensus sequence: DDGCCASYAGMGGGCKVM

Best Matches for Motif ID 156 (Highest to Lowest)

Dataset #: 4
Motif ID: 165
Motif name: wgGCCAshAGrGGGCrsy
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 18
Similarity score: 0.0156448

Alignment:
HDGCCACHAGRGGGCRBY
DDGCCASYAGMGGGCKVM

Original motif     Consensus sequence: HDGCCACHAGRGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCKCTHGTGGCHH


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 18
Similarity score: 0.0201276

Alignment:
VHGGCCAGMAGAGGGCRBY
-DDGCCASYAGMGGGCKVM

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 18
Similarity score: 0.0207204

Alignment:
YDRCCASYAGRKGGCRSYV
-DDGCCASYAGMGGGCKVM

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 3
Motif ID: 113
Motif name: REST
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 18
Similarity score: 0.0950319

Alignment:
GGYGCTGTCCATGGTGCTGAA
---RVYGCCCYCTKSTGGCHD

Original motif     Consensus sequence: TTCAGCACCATGGACAGCKCC Reverse complement motif     Consensus sequence: GGYGCTGTCCATGGTGCTGAA


Dataset #: 3
Motif ID: 109
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 18
Similarity score: 0.09559

Alignment:
MSGKKRCGCWDCABTGBBCD
--RVYGCCCYCTKSTGGCHD

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 4 Motif ID: 157 Motif name: wtATTTTTAww

Original motif     Consensus sequence: DTATTTTTAWW Reverse complement motif     Consensus sequence: WWTAAAAATAD

Best Matches for Motif ID 157 (Highest to Lowest)

Dataset #: 4
Motif ID: 150
Motif name: waATwAAAATAww
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0

Alignment:
DHTATTTTWATHD
-DTATTTTTAWW-

Original motif     Consensus sequence: DHATWAAAATAHD Reverse complement motif     Consensus sequence: DHTATTTTWATHD


Dataset #: 2
Motif ID: 68
Motif name: Motif 68
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.0323073

Alignment:
WAAWAAAWAWWWAA
--WWTAAAAATAD-

Original motif     Consensus sequence: WAAWAAAWAWWWAA Reverse complement motif     Consensus sequence: TTWWWTWTTTWTTW


Dataset #: 3
Motif ID: 87
Motif name: HNF4A
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0727314

Alignment:
RGGBCAAAGKYCA
WWTAAAAATAD--

Original motif     Consensus sequence: RGGBCAAAGKYCA Reverse complement motif     Consensus sequence: TGMYCTTTGBCCK


Dataset #: 3
Motif ID: 107
Motif name: NR2F1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0739182

Alignment:
AKGYYCAAAGRTCA
---WWTAAAAATAD

Original motif     Consensus sequence: TGAMCTTTGMMCYT Reverse complement motif     Consensus sequence: AKGYYCAAAGRTCA


Dataset #: 3
Motif ID: 104
Motif name: NFYA
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 5
Number of overlap: 11
Similarity score: 0.0755742

Alignment:
BHVCKSATTGGMKBVV
-DTATTTTTAWW----

Original motif     Consensus sequence: VBBRRCCAATSRGVDB Reverse complement motif     Consensus sequence: BHVCKSATTGGMKBVV


Dataset #: 4 Motif ID: 158 Motif name: grCCACwAGrk

Original motif     Consensus sequence: DDCCACWAGRK Reverse complement motif     Consensus sequence: YMCTWGTGGHH

Best Matches for Motif ID 158 (Highest to Lowest)

Dataset #: 4
Motif ID: 138
Motif name: grCCACyAGAkG
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0013909

Alignment:
DDCCACYAGAKG
DDCCACWAGRK-

Original motif     Consensus sequence: DDCCACYAGAKG Reverse complement motif     Consensus sequence: CYTCTMGTGGHH


Dataset #: 4
Motif ID: 145
Motif name: grCCACyAGAkG
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.00619044

Alignment:
DDCCACYAGAKG
DDCCACWAGRK-

Original motif     Consensus sequence: DDCCACYAGAKG Reverse complement motif     Consensus sequence: CYTCTKGTGGHH


Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 8
Number of overlap: 11
Similarity score: 0.0223616

Alignment:
BMSMGCCYMCTKSTGGMHM
-------YMCTWGTGGHH-

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 4
Motif ID: 165
Motif name: wgGCCAshAGrGGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 7
Number of overlap: 11
Similarity score: 0.0228739

Alignment:
HDGCCACHAGRGGGCRBY
-DDCCACWAGRK------

Original motif     Consensus sequence: HDGCCACHAGRGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCKCTHGTGGCHH


Dataset #: 4
Motif ID: 151
Motif name: agrCCAGmAGrg
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0330864

Alignment:
HVGCCAGMAGRG
-DDCCACWAGRK

Original motif     Consensus sequence: HVGCCAGMAGRG Reverse complement motif     Consensus sequence: CKCTRCTGGCVH


Dataset #: 4 Motif ID: 159 Motif name: kkAAGAGCAsy

Original motif     Consensus sequence: DBAAGAGCAVH Reverse complement motif     Consensus sequence: HVTGCTCTTBH

Best Matches for Motif ID 159 (Highest to Lowest)

Dataset #: 4
Motif ID: 160
Motif name: brCAGGGCCrs
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0212428

Alignment:
BBGGCCCTGBB
HVTGCTCTTBH

Original motif     Consensus sequence: BVCAGGGCCVB Reverse complement motif     Consensus sequence: BBGGCCCTGBB


Dataset #: 4
Motif ID: 133
Motif name: shAGrGGGCAgy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0322726

Alignment:
SHAGRGGGCABH
-DBAAGAGCAVH

Original motif     Consensus sequence: SHAGRGGGCABH Reverse complement motif     Consensus sequence: DBTGCCCKCTDS


Dataset #: 3
Motif ID: 70
Motif name: Ar
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 12
Number of overlap: 11
Similarity score: 0.0353029

Alignment:
VRVDGGHACAVDDKGTHCTDWH
-----------HVTGCTCTTBH

Original motif     Consensus sequence: HWDAGHACRHHVTGTHCCHVMV Reverse complement motif     Consensus sequence: VRVDGGHACAVDDKGTHCTDWH


Dataset #: 3
Motif ID: 75
Motif name: Ddit3Cebpa
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0380063

Alignment:
VDRTGCAATMCC
HVTGCTCTTBH-

Original motif     Consensus sequence: VDRTGCAATMCC Reverse complement motif     Consensus sequence: GGRATTGCAKHB


Dataset #: 4
Motif ID: 168
Motif name: yrcrGYGCCMyCTGGtG
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0432631

Alignment:
CACCAGMGGGCGCTGBD
------HVTGCTCTTBH

Original motif     Consensus sequence: HVCAGCGCCCYCTGGTG Reverse complement motif     Consensus sequence: CACCAGMGGGCGCTGBD


Dataset #: 4 Motif ID: 160 Motif name: brCAGGGCCrs

Original motif     Consensus sequence: BVCAGGGCCVB Reverse complement motif     Consensus sequence: BBGGCCCTGBB

Best Matches for Motif ID 160 (Highest to Lowest)

Dataset #: 4
Motif ID: 168
Motif name: yrcrGYGCCMyCTGGtG
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0430085

Alignment:
HVCAGCGCCCYCTGGTG
BVCAGGGCCVB------

Original motif     Consensus sequence: HVCAGCGCCCYCTGGTG Reverse complement motif     Consensus sequence: CACCAGMGGGCGCTGBD


Dataset #: 4
Motif ID: 170
Motif name: ssGGCrsTGCrs
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.0438378

Alignment:
BVGCASMGCCVV
-BVCAGGGCCVB

Original motif     Consensus sequence: VVGGCRSTGCVB Reverse complement motif     Consensus sequence: BVGCASMGCCVV


Dataset #: 4
Motif ID: 159
Motif name: kkAAGAGCAsy
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0567379

Alignment:
HVTGCTCTTBH
BBGGCCCTGBB

Original motif     Consensus sequence: DBAAGAGCAVH Reverse complement motif     Consensus sequence: HVTGCTCTTBH


Dataset #: 4
Motif ID: 149
Motif name: asmAGRGGGCrCTGsmkc
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 6
Number of overlap: 11
Similarity score: 0.0583002

Alignment:
ASMAGAGGGCRCTGSABH
--BBGGCCCTGBB-----

Original motif     Consensus sequence: ASMAGAGGGCRCTGSABH Reverse complement motif     Consensus sequence: DBTSCAGMGCCCTCTRST


Dataset #: 3
Motif ID: 113
Motif name: REST
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 11
Number of overlap: 11
Similarity score: 0.0603368

Alignment:
TTCAGCACCATGGACAGCKCC
BVCAGGGCCVB----------

Original motif     Consensus sequence: TTCAGCACCATGGACAGCKCC Reverse complement motif     Consensus sequence: GGYGCTGTCCATGGTGCTGAA


Dataset #: 4 Motif ID: 161 Motif name: ssCGCwGCGss

Original motif     Consensus sequence: VSCGCDGCGSB Reverse complement motif     Consensus sequence: BSCGCDGCGSV

Best Matches for Motif ID 161 (Highest to Lowest)

Dataset #: 4
Motif ID: 170
Motif name: ssGGCrsTGCrs
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.0546471

Alignment:
VVGGCRSTGCVB
BSCGCDGCGSV-

Original motif     Consensus sequence: VVGGCRSTGCVB Reverse complement motif     Consensus sequence: BVGCASMGCCVV


Dataset #: 4
Motif ID: 169
Motif name: yvTGCyGCCmCCwGgtG
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0565318

Alignment:
CDCCWGGTGGCAGCAVV
------BSCGCDGCGSV

Original motif     Consensus sequence: BVTGCTGCCACCWGGDG Reverse complement motif     Consensus sequence: CDCCWGGTGGCAGCAVV


Dataset #: 4
Motif ID: 149
Motif name: asmAGRGGGCrCTGsmkc
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0580603

Alignment:
DBTSCAGMGCCCTCTRST
BSCGCDGCGSV-------

Original motif     Consensus sequence: ASMAGAGGGCRCTGSABH Reverse complement motif     Consensus sequence: DBTSCAGMGCCCTCTRST


Dataset #: 4
Motif ID: 154
Motif name: csCsCCTCCcc
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0592711

Alignment:
VBCCCCTCCHB
BSCGCDGCGSV

Original motif     Consensus sequence: VBCCCCTCCHB Reverse complement motif     Consensus sequence: BDGGAGGGGBV


Dataset #: 4
Motif ID: 155
Motif name: csCSCCdCCCcs
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.0599572

Alignment:
VDGGGDGGGGBV
VSCGCDGCGSB-

Original motif     Consensus sequence: VBCCCCDCCCHV Reverse complement motif     Consensus sequence: VDGGGDGGGGBV


Dataset #: 4 Motif ID: 162 Motif name: ccAsCCCCAcc

Original motif     Consensus sequence: HVASCCCCABH Reverse complement motif     Consensus sequence: DBTGGGGSTVD

Best Matches for Motif ID 162 (Highest to Lowest)

Dataset #: 4
Motif ID: 154
Motif name: csCsCCTCCcc
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0318935

Alignment:
BDGGAGGGGBV
DBTGGGGSTVD

Original motif     Consensus sequence: VBCCCCTCCHB Reverse complement motif     Consensus sequence: BDGGAGGGGBV


Dataset #: 4
Motif ID: 146
Motif name: myrGYGCCmCCTast
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 11
Similarity score: 0.0360618

Alignment:
VBAGCGCCMCCTAST
HVASCCCCABH----

Original motif     Consensus sequence: VBAGCGCCMCCTAST Reverse complement motif     Consensus sequence: ASTAGGYGGCGCTBB


Dataset #: 3
Motif ID: 131
Motif name: znf143
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 10
Number of overlap: 11
Similarity score: 0.0409371

Alignment:
BAHYTCCCAKMATGCMWYGC
HVASCCCCABH---------

Original motif     Consensus sequence: BAHYTCCCAKMATGCMWYGC Reverse complement motif     Consensus sequence: GCMWRGCATYRTGGGAMHTB


Dataset #: 4
Motif ID: 155
Motif name: csCSCCdCCCcs
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.0412348

Alignment:
VDGGGDGGGGBV
-DBTGGGGSTVD

Original motif     Consensus sequence: VBCCCCDCCCHV Reverse complement motif     Consensus sequence: VDGGGDGGGGBV


Dataset #: 3
Motif ID: 111
Motif name: PPARG
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0446625

Alignment:
STAGGTCACBGTGACCYABT
---------HVASCCCCABH

Original motif     Consensus sequence: STAGGTCACBGTGACCYABT Reverse complement motif     Consensus sequence: ABTMGGTCACBGTGACCTAS


Dataset #: 4 Motif ID: 163 Motif name: gwGGCCAGmAGAGGGCrby

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV

Best Matches for Motif ID 163 (Highest to Lowest)

Dataset #: 3
Motif ID: 125
Motif name: TP53
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 19
Similarity score: 0.0964434

Alignment:
ACATGCCCGGKCATGTCCSR
-KBKGCCCTCTYCTGGCCHV

Original motif     Consensus sequence: MSGGACATGYCCGGGCATGT Reverse complement motif     Consensus sequence: ACATGCCCGGKCATGTCCSR


Dataset #: 3
Motif ID: 113
Motif name: REST
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 19
Similarity score: 0.104301

Alignment:
TTCAGCACCATGGACAGCKCC
--VHGGCCAGMAGAGGGCRBY

Original motif     Consensus sequence: TTCAGCACCATGGACAGCKCC Reverse complement motif     Consensus sequence: GGYGCTGTCCATGGTGCTGAA


Dataset #: 4
Motif ID: 165
Motif name: wgGCCAshAGrGGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 18
Similarity score: 0.502859

Alignment:
-HDGCCACHAGRGGGCRBY
VHGGCCAGMAGAGGGCRBY

Original motif     Consensus sequence: HDGCCACHAGRGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCKCTHGTGGCHH


Dataset #: 4
Motif ID: 156
Motif name: rgyGCCMyCTksTGGccd
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 18
Similarity score: 0.525011

Alignment:
-RVYGCCCYCTKSTGGCHD
KBKGCCCTCTYCTGGCCHV

Original motif     Consensus sequence: RVYGCCCYCTKSTGGCHD Reverse complement motif     Consensus sequence: DDGCCASYAGMGGGCKVM


Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 18
Similarity score: 0.529309

Alignment:
-YDRCCASYAGRKGGCRSYV
VHGGCCAGMAGAGGGCRBY-

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 4 Motif ID: 164 Motif name: asyAGrkGGCRGCAga

Original motif     Consensus sequence: ASYAGRKGGCAGCABH Reverse complement motif     Consensus sequence: HBTGCTGCCYMCTKST

Best Matches for Motif ID 164 (Highest to Lowest)

Dataset #: 4
Motif ID: 144
Motif name: ctCTrsyGCCmCCTast
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 16
Similarity score: 0.0253571

Alignment:
HDCTGSYGCCMCCTAST
HBTGCTGCCYMCTKST-

Original motif     Consensus sequence: HDCTGSYGCCMCCTAST Reverse complement motif     Consensus sequence: ASTAGGYGGCMSCAGDD


Dataset #: 4
Motif ID: 169
Motif name: yvTGCyGCCmCCwGgtG
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 16
Similarity score: 0.0299559

Alignment:
CDCCWGGTGGCAGCAVV
-ASYAGRKGGCAGCABH

Original motif     Consensus sequence: BVTGCTGCCACCWGGDG Reverse complement motif     Consensus sequence: CDCCWGGTGGCAGCAVV


Dataset #: 4
Motif ID: 143
Motif name: AgmAGAGGGCrscAGak
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 16
Similarity score: 0.0333221

Alignment:
AGMAGAGGGCASCAGAK
ASYAGRKGGCAGCABH-

Original motif     Consensus sequence: AGMAGAGGGCASCAGAK Reverse complement motif     Consensus sequence: RTCTGSTGCCCTCTYCT


Dataset #: 4
Motif ID: 167
Motif name: rsyAGrkGGCGCCmyCTrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 16
Similarity score: 0.0458621

Alignment:
DSYAGRKGGCGCCMYCTRSH
ASYAGRKGGCAGCABH----

Original motif     Consensus sequence: DSYAGRKGGCGCCMYCTRSH Reverse complement motif     Consensus sequence: HSKAGKYGGCGCCRMCTMSD


Dataset #: 4
Motif ID: 149
Motif name: asmAGRGGGCrCTGsmkc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 16
Similarity score: 0.0529808

Alignment:
ASMAGAGGGCRCTGSABH
ASYAGRKGGCAGCABH--

Original motif     Consensus sequence: ASMAGAGGGCRCTGSABH Reverse complement motif     Consensus sequence: DBTSCAGMGCCCTCTRST


Dataset #: 4 Motif ID: 165 Motif name: wgGCCAshAGrGGGCrsy

Original motif     Consensus sequence: HDGCCACHAGRGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCKCTHGTGGCHH

Best Matches for Motif ID 165 (Highest to Lowest)

Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 18
Similarity score: 0.00922625

Alignment:
KBKGCCCTCTYCTGGCCHV
KBKGCCCKCTHGTGGCHH-

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 18
Similarity score: 0.0205802

Alignment:
YDRCCASYAGRKGGCRSYV
HDGCCACHAGRGGGCRBY-

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 4
Motif ID: 156
Motif name: rgyGCCMyCTksTGGccd
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 18
Similarity score: 0.0268949

Alignment:
RVYGCCCYCTKSTGGCHD
KBKGCCCKCTHGTGGCHH

Original motif     Consensus sequence: RVYGCCCYCTKSTGGCHD Reverse complement motif     Consensus sequence: DDGCCASYAGMGGGCKVM


Dataset #: 3
Motif ID: 109
Motif name: Pax5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 18
Similarity score: 0.103512

Alignment:
MSGKKRCGCWDCABTGBBCD
--KBKGCCCKCTHGTGGCHH

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 3
Motif ID: 125
Motif name: TP53
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 18
Similarity score: 0.105007

Alignment:
ACATGCCCGGKCATGTCCSR
-KBKGCCCKCTHGTGGCHH-

Original motif     Consensus sequence: MSGGACATGYCCGGGCATGT Reverse complement motif     Consensus sequence: ACATGCCCGGKCATGTCCSR


Dataset #: 4 Motif ID: 166 Motif name: CasCAGrGGGCrsy

Original motif     Consensus sequence: CACCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCKCTGGTG

Best Matches for Motif ID 166 (Highest to Lowest)

Dataset #: 4
Motif ID: 165
Motif name: wgGCCAshAGrGGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 14
Similarity score: 0.015353

Alignment:
HDGCCACHAGRGGGCRBY
----CACCAGRGGGCRSB

Original motif     Consensus sequence: HDGCCACHAGRGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCKCTHGTGGCHH


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 6
Number of overlap: 14
Similarity score: 0.0273616

Alignment:
VHGGCCAGMAGAGGGCRBY
-----CACCAGRGGGCRSB

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 14
Similarity score: 0.0281629

Alignment:
YDRCCASYAGRKGGCRSYV
----CACCAGRGGGCRSB-

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 4
Motif ID: 168
Motif name: yrcrGYGCCMyCTGGtG
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.03743

Alignment:
CACCAGMGGGCGCTGBD
CACCAGRGGGCRSB---

Original motif     Consensus sequence: HVCAGCGCCCYCTGGTG Reverse complement motif     Consensus sequence: CACCAGMGGGCGCTGBD


Dataset #: 4
Motif ID: 156
Motif name: rgyGCCMyCTksTGGccd
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 14
Similarity score: 0.043415

Alignment:
RVYGCCCYCTKSTGGCHD
----BSKGCCCKCTGGTG

Original motif     Consensus sequence: RVYGCCCYCTKSTGGCHD Reverse complement motif     Consensus sequence: DDGCCASYAGMGGGCKVM


Dataset #: 4 Motif ID: 167 Motif name: rsyAGrkGGCGCCmyCTrsy

Original motif     Consensus sequence: DSYAGRKGGCGCCMYCTRSH Reverse complement motif     Consensus sequence: HSKAGKYGGCGCCRMCTMSD

Best Matches for Motif ID 167 (Highest to Lowest)

Dataset #: 3
Motif ID: 81
Motif name: ESR1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.0672057

Alignment:
VDBHMAGGTCACCCTGACCY
DSYAGRKGGCGCCMYCTRSH

Original motif     Consensus sequence: VDBHMAGGTCACCCTGACCY Reverse complement motif     Consensus sequence: MGGTCAGGGTGACCTRDBHV


Dataset #: 3
Motif ID: 109
Motif name: Pax5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.0747165

Alignment:
MSGKKRCGCWDCABTGBBCD
HSKAGKYGGCGCCRMCTMSD

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 3
Motif ID: 70
Motif name: Ar
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 19
Similarity score: 0.57268

Alignment:
HWDAGHACRHHVTGTHCCHVMV-
---DSYAGRKGGCGCCMYCTRSH

Original motif     Consensus sequence: HWDAGHACRHHVTGTHCCHVMV Reverse complement motif     Consensus sequence: VRVDGGHACAVDDKGTHCTDWH


Dataset #: 3
Motif ID: 111
Motif name: PPARG
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 19
Similarity score: 0.57362

Alignment:
-ABTMGGTCACBGTGACCTAS
DSYAGRKGGCGCCMYCTRSH-

Original motif     Consensus sequence: STAGGTCACBGTGACCYABT Reverse complement motif     Consensus sequence: ABTMGGTCACBGTGACCTAS


Dataset #: 4
Motif ID: 149
Motif name: asmAGRGGGCrCTGsmkc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 18
Similarity score: 1.03519

Alignment:
ASMAGAGGGCRCTGSABH--
DSYAGRKGGCGCCMYCTRSH

Original motif     Consensus sequence: ASMAGAGGGCRCTGSABH Reverse complement motif     Consensus sequence: DBTSCAGMGCCCTCTRST


Dataset #: 4 Motif ID: 168 Motif name: yrcrGYGCCMyCTGGtG

Original motif     Consensus sequence: HVCAGCGCCCYCTGGTG Reverse complement motif     Consensus sequence: CACCAGMGGGCGCTGBD

Best Matches for Motif ID 168 (Highest to Lowest)

Dataset #: 4
Motif ID: 169
Motif name: yvTGCyGCCmCCwGgtG
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 17
Similarity score: 0.0386724

Alignment:
BVTGCTGCCACCWGGDG
HVCAGCGCCCYCTGGTG

Original motif     Consensus sequence: BVTGCTGCCACCWGGDG Reverse complement motif     Consensus sequence: CDCCWGGTGGCAGCAVV


Dataset #: 4
Motif ID: 149
Motif name: asmAGRGGGCrCTGsmkc
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 17
Similarity score: 0.0542719

Alignment:
DBTSCAGMGCCCTCTRST
-CACCAGMGGGCGCTGBD

Original motif     Consensus sequence: ASMAGAGGGCRCTGSABH Reverse complement motif     Consensus sequence: DBTSCAGMGCCCTCTRST


Dataset #: 3
Motif ID: 81
Motif name: ESR1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 17
Similarity score: 0.0695994

Alignment:
VDBHMAGGTCACCCTGACCY
--HVCAGCGCCCYCTGGTG-

Original motif     Consensus sequence: VDBHMAGGTCACCCTGACCY Reverse complement motif     Consensus sequence: MGGTCAGGGTGACCTRDBHV


Dataset #: 3
Motif ID: 70
Motif name: Ar
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 17
Similarity score: 0.074879

Alignment:
HWDAGHACRHHVTGTHCCHVMV
HVCAGCGCCCYCTGGTG-----

Original motif     Consensus sequence: HWDAGHACRHHVTGTHCCHVMV Reverse complement motif     Consensus sequence: VRVDGGHACAVDDKGTHCTDWH


Dataset #: 4
Motif ID: 156
Motif name: rgyGCCMyCTksTGGccd
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 17
Similarity score: 0.076934

Alignment:
RVYGCCCYCTKSTGGCHD
HVCAGCGCCCYCTGGTG-

Original motif     Consensus sequence: RVYGCCCYCTKSTGGCHD Reverse complement motif     Consensus sequence: DDGCCASYAGMGGGCKVM


Dataset #: 4 Motif ID: 169 Motif name: yvTGCyGCCmCCwGgtG

Original motif     Consensus sequence: BVTGCTGCCACCWGGDG Reverse complement motif     Consensus sequence: CDCCWGGTGGCAGCAVV

Best Matches for Motif ID 169 (Highest to Lowest)

Dataset #: 4
Motif ID: 168
Motif name: yrcrGYGCCMyCTGGtG
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 17
Similarity score: 0.0263455

Alignment:
HVCAGCGCCCYCTGGTG
BVTGCTGCCACCWGGDG

Original motif     Consensus sequence: HVCAGCGCCCYCTGGTG Reverse complement motif     Consensus sequence: CACCAGMGGGCGCTGBD


Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 17
Similarity score: 0.0578732

Alignment:
BMSMGCCYMCTKSTGGMHM
-BVTGCTGCCACCWGGDG-

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 4
Motif ID: 167
Motif name: rsyAGrkGGCGCCmyCTrsy
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 17
Similarity score: 0.0596753

Alignment:
HSKAGKYGGCGCCRMCTMSD
--BVTGCTGCCACCWGGDG-

Original motif     Consensus sequence: DSYAGRKGGCGCCMYCTRSH Reverse complement motif     Consensus sequence: HSKAGKYGGCGCCRMCTMSD


Dataset #: 4
Motif ID: 156
Motif name: rgyGCCMyCTksTGGccd
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 17
Similarity score: 0.0597938

Alignment:
RVYGCCCYCTKSTGGCHD
BVTGCTGCCACCWGGDG-

Original motif     Consensus sequence: RVYGCCCYCTKSTGGCHD Reverse complement motif     Consensus sequence: DDGCCASYAGMGGGCKVM


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 17
Similarity score: 0.0605716

Alignment:
VHGGCCAGMAGAGGGCRBY
CDCCWGGTGGCAGCAVV--

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 4 Motif ID: 170 Motif name: ssGGCrsTGCrs

Original motif     Consensus sequence: VVGGCRSTGCVB Reverse complement motif     Consensus sequence: BVGCASMGCCVV

Best Matches for Motif ID 170 (Highest to Lowest)

Dataset #: 4
Motif ID: 149
Motif name: asmAGRGGGCrCTGsmkc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 12
Similarity score: 0.038906

Alignment:
ASMAGAGGGCRCTGSABH
-----VVGGCRSTGCVB-

Original motif     Consensus sequence: ASMAGAGGGCRCTGSABH Reverse complement motif     Consensus sequence: DBTSCAGMGCCCTCTRST


Dataset #: 3
Motif ID: 130
Motif name: Zfx
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.0768177

Alignment:
BBVGCCBVGGCCTV
BVGCASMGCCVV--

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB


Dataset #: 4
Motif ID: 155
Motif name: csCSCCdCCCcs
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.0798188

Alignment:
VBCCCCDCCCHV
BVGCASMGCCVV

Original motif     Consensus sequence: VBCCCCDCCCHV Reverse complement motif     Consensus sequence: VDGGGDGGGGBV


Dataset #: 4
Motif ID: 144
Motif name: ctCTrsyGCCmCCTast
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 6
Number of overlap: 12
Similarity score: 0.0800293

Alignment:
ASTAGGYGGCMSCAGDD
VVGGCRSTGCVB-----

Original motif     Consensus sequence: HDCTGSYGCCMCCTAST Reverse complement motif     Consensus sequence: ASTAGGYGGCMSCAGDD


Dataset #: 4
Motif ID: 146
Motif name: myrGYGCCmCCTast
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 12
Similarity score: 0.0817044

Alignment:
VBAGCGCCMCCTAST
--BVGCASMGCCVV-

Original motif     Consensus sequence: VBAGCGCCMCCTAST Reverse complement motif     Consensus sequence: ASTAGGYGGCGCTBB


Dataset #: 4 Motif ID: 171 Motif name: ysGTGGCCACsr

Original motif     Consensus sequence: BVGTGGCCACBV Reverse complement motif     Consensus sequence: VBGTGGCCACVB

Best Matches for Motif ID 171 (Highest to Lowest)

Dataset #: 4
Motif ID: 169
Motif name: yvTGCyGCCmCCwGgtG
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 12
Similarity score: 0.0325062

Alignment:
BVTGCTGCCACCWGGDG
----VBGTGGCCACVB-

Original motif     Consensus sequence: BVTGCTGCCACCWGGDG Reverse complement motif     Consensus sequence: CDCCWGGTGGCAGCAVV


Dataset #: 3
Motif ID: 81
Motif name: ESR1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 12
Similarity score: 0.0344223

Alignment:
MGGTCAGGGTGACCTRDBHV
------VBGTGGCCACVB--

Original motif     Consensus sequence: VDBHMAGGTCACCCTGACCY Reverse complement motif     Consensus sequence: MGGTCAGGGTGACCTRDBHV


Dataset #: 3
Motif ID: 111
Motif name: PPARG
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.0381861

Alignment:
ABTMGGTCACBGTGACCTAS
--------BVGTGGCCACBV

Original motif     Consensus sequence: STAGGTCACBGTGACCYABT Reverse complement motif     Consensus sequence: ABTMGGTCACBGTGACCTAS


Dataset #: 4
Motif ID: 146
Motif name: myrGYGCCmCCTast
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.0484805

Alignment:
ASTAGGYGGCGCTBB
BVGTGGCCACBV---

Original motif     Consensus sequence: VBAGCGCCMCCTAST Reverse complement motif     Consensus sequence: ASTAGGYGGCGCTBB


Dataset #: 4
Motif ID: 170
Motif name: ssGGCrsTGCrs
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.0498451

Alignment:
BVGCASMGCCVV
BVGTGGCCACBV

Original motif     Consensus sequence: VVGGCRSTGCVB Reverse complement motif     Consensus sequence: BVGCASMGCCVV


Results created by MOTIFSIM on 06-18-2018 16:50:38
Runtime: 1017.73 seconds

MOTIFSIM is written by Ngoc Tam L. Tran
Motif logo generated by weblogo