MOTIFSIM - MOTIF SIMilarity Detection Tool

Version 2.2

INPUT

Input Parameters
Number of files: 5
Number of top significant motifs: 10
Number of best matches: 10
Similarity cutoff >= 0.75
Matching motif database: UniProbe Mus Musculus
Motif tree: Yes
Combined similar motifs: Yes
Output file type: All
Output file format: All

Input files and motif counts
File name Count of motifs Dataset number
DREME_DM230.txt 1 1
MEME_DM230.txt 20 2
PScanChIP_DM230.txt 14 3
RSAT_peak-motifs_DM230.txt 10 4
PScanChIP_DM230.txt 14 5

RESULTS

Top 10 Significant Motifs - Global Matching (Highest to Lowest)

Dataset #: 4 Motif ID: 45 Motif name: wbgTAAATAww

Original motif     Consensus sequence: DBGTAAATAHD Reverse complement motif     Consensus sequence: DHTATTTACBD

Best Matches for Top Significant Motif ID 45 (Highest to Lowest)

Dataset #: 2
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 11
Similarity score: 0.0177412

Alignment:
AATHATATWTHAAA
DHTATTTACBD---

Original motif     Consensus sequence: AATHATATWTHAAA Reverse complement motif     Consensus sequence: TTTDAWATATHATT


Dataset #: 2
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0205821

Alignment:
AATTYDGAARTAWW
---DBGTAAATAHD

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT


Dataset #: 2
Motif ID: 4
Motif name: Motif 4
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0288058

Alignment:
AWGKAAWTTTT
DBGTAAATAHD

Original motif     Consensus sequence: AAAAWTTRCWT Reverse complement motif     Consensus sequence: AWGKAAWTTTT


Dataset #: 2
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.0337252

Alignment:
AWAAAWTWAAASWA
--DHTATTTACBD-

Original motif     Consensus sequence: AWAAAWTWAAASWA Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT


Dataset #: 2
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0404685

Alignment:
AWTAAATAYAATTT
---DHTATTTACBD

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT


Dataset #: 5
Motif ID: 55
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 10
Number of overlap: 11
Similarity score: 0.0439858

Alignment:
DGVBCABTGDWGCGKRRCSR
DBGTAAATAHD---------

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0439858

Alignment:
DGVBCABTGDWGCGKRRCSR
DBGTAAATAHD---------

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 5
Motif ID: 59
Motif name: GABPA
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0439962

Alignment:
CCGGAAGTGVV
DBGTAAATAHD

Original motif     Consensus sequence: CCGGAAGTGVV Reverse complement motif     Consensus sequence: VVCACTTCCGG


Dataset #: 3
Motif ID: 35
Motif name: GABPA
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0439962

Alignment:
CCGGAAGTGVV
DBGTAAATAHD

Original motif     Consensus sequence: CCGGAAGTGVV Reverse complement motif     Consensus sequence: VVCACTTCCGG


Dataset #: 2
Motif ID: 19
Motif name: Motif 19
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.0477737

Alignment:
TWTAATCTAWGAA
-DHTATTTACBD-

Original motif     Consensus sequence: TTCWTAGATTAWA Reverse complement motif     Consensus sequence: TWTAATCTAWGAA


Dataset #: 1 Motif ID: 1 Motif name: Motif 1

Original motif     Consensus sequence: GGCGGGGC Reverse complement motif     Consensus sequence: GCCCCGCC

Best Matches for Top Significant Motif ID 1 (Highest to Lowest)

Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 8
Similarity score: 0

Alignment:
HVGCCCCGCCCCBB
--GCCCCGCC----

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD


Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 8
Similarity score: 0.00250079

Alignment:
BCCGCCCCGCCCCBB
---GCCCCGCC----

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB


Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.0149958

Alignment:
MSGGGGCGGGGYSG
----GGCGGGGC--

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG


Dataset #: 5
Motif ID: 51
Motif name: Klf4
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0349983

Alignment:
DGGGYGKGGC
--GGCGGGGC

Original motif     Consensus sequence: DGGGYGKGGC Reverse complement motif     Consensus sequence: GCCYCMCCCD


Dataset #: 3
Motif ID: 27
Motif name: Klf4
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0349983

Alignment:
DGGGYGKGGC
--GGCGGGGC

Original motif     Consensus sequence: DGGGYGKGGC Reverse complement motif     Consensus sequence: GCCYCMCCCD


Dataset #: 3
Motif ID: 22
Motif name: Zfx
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0708224

Alignment:
VAGGCCBBGGCVBB
---GCCCCGCC---

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB


Dataset #: 5
Motif ID: 46
Motif name: Zfx
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0708224

Alignment:
VAGGCCBBGGCVBB
---GCCCCGCC---

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB


Dataset #: 5
Motif ID: 55
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0853847

Alignment:
DGVBCABTGDWGCGKRRCSR
----------GGCGGGGC--

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0853847

Alignment:
DGVBCABTGDWGCGKRRCSR
----------GGCGGGGC--

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 3
Motif ID: 23
Motif name: Egr1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0878731

Alignment:
HGCGTGGGCGK
GGCGGGGC---

Original motif     Consensus sequence: HGCGTGGGCGK Reverse complement motif     Consensus sequence: YCGCCCACGCH


Dataset #: 5
Motif ID: 47
Motif name: Egr1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0878731

Alignment:
HGCGTGGGCGK
GGCGGGGC---

Original motif     Consensus sequence: HGCGTGGGCGK Reverse complement motif     Consensus sequence: YCGCCCACGCH


Dataset #: 3 Motif ID: 32 Motif name: ArntAhr

Original motif     Consensus sequence: YGCGTG Reverse complement motif     Consensus sequence: CACGCM

Best Matches for Top Significant Motif ID 32 (Highest to Lowest)

Dataset #: 5
Motif ID: 56
Motif name: ArntAhr
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0

Alignment:
YGCGTG
YGCGTG

Original motif     Consensus sequence: YGCGTG Reverse complement motif     Consensus sequence: CACGCM


Dataset #: 5
Motif ID: 47
Motif name: Egr1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0.0340278

Alignment:
HGCGTGGGCGK
YGCGTG-----

Original motif     Consensus sequence: HGCGTGGGCGK Reverse complement motif     Consensus sequence: YCGCCCACGCH


Dataset #: 5
Motif ID: 53
Motif name: HIF1AARNT
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.0452724

Alignment:
VBACGTGV
-YGCGTG-

Original motif     Consensus sequence: VBACGTGV Reverse complement motif     Consensus sequence: VCACGTBV


Dataset #: 5
Motif ID: 57
Motif name: Mycn
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 6
Similarity score: 0.0718227

Alignment:
GCCACGTGSD
--YGCGTG--

Original motif     Consensus sequence: HSCACGTGGC Reverse complement motif     Consensus sequence: GCCACGTGSD


Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 6
Similarity score: 0.0736681

Alignment:
HVGCCCCGCCCCBB
----CACGCM----

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD


Dataset #: 5
Motif ID: 58
Motif name: Myc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.0739492

Alignment:
DCCACGTGCV
--YGCGTG--

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV


Dataset #: 1
Motif ID: 1
Motif name: Motif 1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 6
Similarity score: 0.0746528

Alignment:
GCCCCGCC
--CACGCM

Original motif     Consensus sequence: GGCGGGGC Reverse complement motif     Consensus sequence: GCCCCGCC


Dataset #: 4
Motif ID: 42
Motif name: sSGTCACGTGACSs
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 6
Similarity score: 0.0752315

Alignment:
SGGTCACGTGACCS
----YGCGTG----

Original motif     Consensus sequence: SGGTCACGTGACCS Reverse complement motif     Consensus sequence: SGGTCACGTGACCS


Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 6
Number of overlap: 6
Similarity score: 0.0765366

Alignment:
BCCGCCCCGCCCCBB
-----CACGCM----

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB


Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 6
Similarity score: 0.0806145

Alignment:
MSGGGGCGGGGYSG
----YGCGTG----

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG


Dataset #: 5 Motif ID: 56 Motif name: ArntAhr

Original motif     Consensus sequence: YGCGTG Reverse complement motif     Consensus sequence: CACGCM

Best Matches for Top Significant Motif ID 56 (Highest to Lowest)

Dataset #: 3
Motif ID: 32
Motif name: ArntAhr
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0

Alignment:
YGCGTG
YGCGTG

Original motif     Consensus sequence: YGCGTG Reverse complement motif     Consensus sequence: CACGCM


Dataset #: 3
Motif ID: 23
Motif name: Egr1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.0340278

Alignment:
YCGCCCACGCH
-----CACGCM

Original motif     Consensus sequence: HGCGTGGGCGK Reverse complement motif     Consensus sequence: YCGCCCACGCH


Dataset #: 3
Motif ID: 29
Motif name: HIF1AARNT
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.0452724

Alignment:
VBACGTGV
-YGCGTG-

Original motif     Consensus sequence: VBACGTGV Reverse complement motif     Consensus sequence: VCACGTBV


Dataset #: 3
Motif ID: 33
Motif name: Mycn
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 6
Similarity score: 0.0718227

Alignment:
HSCACGTGGC
--CACGCM--

Original motif     Consensus sequence: HSCACGTGGC Reverse complement motif     Consensus sequence: GCCACGTGSD


Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 6
Similarity score: 0.0736681

Alignment:
BBGGGGCGGGGCVD
----YGCGTG----

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD


Dataset #: 3
Motif ID: 34
Motif name: Myc
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 6
Similarity score: 0.0739492

Alignment:
VGCACGTGGH
--CACGCM--

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV


Dataset #: 1
Motif ID: 1
Motif name: Motif 1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 6
Similarity score: 0.0746528

Alignment:
GCCCCGCC
--CACGCM

Original motif     Consensus sequence: GGCGGGGC Reverse complement motif     Consensus sequence: GCCCCGCC


Dataset #: 4
Motif ID: 42
Motif name: sSGTCACGTGACSs
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 6
Similarity score: 0.0752315

Alignment:
SGGTCACGTGACCS
----YGCGTG----

Original motif     Consensus sequence: SGGTCACGTGACCS Reverse complement motif     Consensus sequence: SGGTCACGTGACCS


Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 6
Number of overlap: 6
Similarity score: 0.0765366

Alignment:
BBGGGGCGGGGCGGB
-----YGCGTG----

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB


Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 6
Similarity score: 0.0806145

Alignment:
MSGGGGCGGGGYSG
----YGCGTG----

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG


Dataset #: 3 Motif ID: 24 Motif name: SP1

Original motif     Consensus sequence: CCCCKCCCCC Reverse complement motif     Consensus sequence: GGGGGYGGGG

Best Matches for Top Significant Motif ID 24 (Highest to Lowest)

Dataset #: 5
Motif ID: 48
Motif name: SP1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0

Alignment:
CCCCKCCCCC
CCCCKCCCCC

Original motif     Consensus sequence: CCCCKCCCCC Reverse complement motif     Consensus sequence: GGGGGYGGGG


Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 10
Similarity score: 0.043504

Alignment:
CSKCCCCGCCCCSY
---CCCCKCCCCC-

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG


Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 10
Similarity score: 0.0486461

Alignment:
BBGGGGCGGGGCVD
-GGGGGYGGGG---

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD


Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.0517173

Alignment:
BCCGCCCCGCCCCBB
----CCCCKCCCCC-

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB


Dataset #: 5
Motif ID: 46
Motif name: Zfx
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0930706

Alignment:
VAGGCCBBGGCVBB
----CCCCKCCCCC

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB


Dataset #: 5
Motif ID: 54
Motif name: PLAG1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.0990873

Alignment:
CCCCCTTGGGCCCC
-CCCCKCCCCC---

Original motif     Consensus sequence: GGGGCCCAAGGGGG Reverse complement motif     Consensus sequence: CCCCCTTGGGCCCC


Dataset #: 5
Motif ID: 51
Motif name: Klf4
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.102706

Alignment:
GCCYCMCCCD
CCCCKCCCCC

Original motif     Consensus sequence: DGGGYGKGGC Reverse complement motif     Consensus sequence: GCCYCMCCCD


Dataset #: 2
Motif ID: 2
Motif name: Motif 2
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.103809

Alignment:
MTMMTCMMTCTKCK
----CCCCKCCCCC

Original motif     Consensus sequence: RGRAGARRGARRAR Reverse complement motif     Consensus sequence: MTMMTCMMTCTKCK


Dataset #: 5
Motif ID: 47
Motif name: Egr1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.106429

Alignment:
HGCGTGGGCGK
GGGGGYGGGG-

Original motif     Consensus sequence: HGCGTGGGCGK Reverse complement motif     Consensus sequence: YCGCCCACGCH


Dataset #: 5
Motif ID: 55
Motif name: Pax5
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 8
Number of overlap: 10
Similarity score: 0.11125

Alignment:
DGVBCABTGDWGCGKRRCSR
-------GGGGGYGGGG---

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 5 Motif ID: 48 Motif name: SP1

Original motif     Consensus sequence: CCCCKCCCCC Reverse complement motif     Consensus sequence: GGGGGYGGGG

Best Matches for Top Significant Motif ID 48 (Highest to Lowest)

Dataset #: 3
Motif ID: 24
Motif name: SP1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0

Alignment:
CCCCKCCCCC
CCCCKCCCCC

Original motif     Consensus sequence: CCCCKCCCCC Reverse complement motif     Consensus sequence: GGGGGYGGGG


Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 10
Similarity score: 0.043504

Alignment:
CSKCCCCGCCCCSY
---CCCCKCCCCC-

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG


Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 10
Similarity score: 0.0486461

Alignment:
BBGGGGCGGGGCVD
-GGGGGYGGGG---

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD


Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.0517173

Alignment:
BCCGCCCCGCCCCBB
----CCCCKCCCCC-

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB


Dataset #: 3
Motif ID: 22
Motif name: Zfx
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0930706

Alignment:
BBVGCCBVGGCCTV
----GGGGGYGGGG

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB


Dataset #: 3
Motif ID: 30
Motif name: PLAG1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.0990873

Alignment:
GGGGCCCAAGGGGG
-GGGGGYGGGG---

Original motif     Consensus sequence: GGGGCCCAAGGGGG Reverse complement motif     Consensus sequence: CCCCCTTGGGCCCC


Dataset #: 3
Motif ID: 27
Motif name: Klf4
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.102706

Alignment:
DGGGYGKGGC
GGGGGYGGGG

Original motif     Consensus sequence: DGGGYGKGGC Reverse complement motif     Consensus sequence: GCCYCMCCCD


Dataset #: 2
Motif ID: 2
Motif name: Motif 2
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.103809

Alignment:
MTMMTCMMTCTKCK
----CCCCKCCCCC

Original motif     Consensus sequence: RGRAGARRGARRAR Reverse complement motif     Consensus sequence: MTMMTCMMTCTKCK


Dataset #: 3
Motif ID: 23
Motif name: Egr1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.106429

Alignment:
YCGCCCACGCH
CCCCKCCCCC-

Original motif     Consensus sequence: HGCGTGGGCGK Reverse complement motif     Consensus sequence: YCGCCCACGCH


Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 8
Number of overlap: 10
Similarity score: 0.11125

Alignment:
MSGKKRCGCWDCABTGBBCD
-------CCCCKCCCCC---

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 5 Motif ID: 53 Motif name: HIF1AARNT

Original motif     Consensus sequence: VBACGTGV Reverse complement motif     Consensus sequence: VCACGTBV

Best Matches for Top Significant Motif ID 53 (Highest to Lowest)

Dataset #: 3
Motif ID: 29
Motif name: HIF1AARNT
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0

Alignment:
VBACGTGV
VBACGTGV

Original motif     Consensus sequence: VBACGTGV Reverse complement motif     Consensus sequence: VCACGTBV


Dataset #: 3
Motif ID: 33
Motif name: Mycn
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0575825

Alignment:
GCCACGTGSD
-VBACGTGV-

Original motif     Consensus sequence: HSCACGTGGC Reverse complement motif     Consensus sequence: GCCACGTGSD


Dataset #: 3
Motif ID: 34
Motif name: Myc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0597215

Alignment:
DCCACGTGCV
-VBACGTGV-

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV


Dataset #: 4
Motif ID: 40
Motif name: kcACCTGCAgc
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0748197

Alignment:
GBTGCAGGTGB
---VCACGTBV

Original motif     Consensus sequence: BCACCTGCABC Reverse complement motif     Consensus sequence: GBTGCAGGTGB


Dataset #: 4
Motif ID: 42
Motif name: sSGTCACGTGACSs
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0767561

Alignment:
SGGTCACGTGACCS
---VBACGTGV---

Original motif     Consensus sequence: SGGTCACGTGACCS Reverse complement motif     Consensus sequence: SGGTCACGTGACCS


Dataset #: 3
Motif ID: 26
Motif name: MIZF
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0829928

Alignment:
GCGGACGTTV
--VCACGTBV

Original motif     Consensus sequence: BAACGTCCGC Reverse complement motif     Consensus sequence: GCGGACGTTV


Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 8
Number of overlap: 8
Similarity score: 0.100962

Alignment:
MSGKKRCGCWDCABTGBBCD
-----VCACGTBV-------

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 4
Motif ID: 44
Motif name: dhACATTCTkh
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.109275

Alignment:
HCAGAATGTHD
VBACGTGV---

Original motif     Consensus sequence: DHACATTCTGH Reverse complement motif     Consensus sequence: HCAGAATGTHD


Dataset #: 3
Motif ID: 35
Motif name: GABPA
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.110088

Alignment:
VVCACTTCCGG
--VBACGTGV-

Original motif     Consensus sequence: CCGGAAGTGVV Reverse complement motif     Consensus sequence: VVCACTTCCGG


Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.116389

Alignment:
HVGCCCCGCCCCBB
---VCACGTBV---

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD


Dataset #: 3 Motif ID: 29 Motif name: HIF1AARNT

Original motif     Consensus sequence: VBACGTGV Reverse complement motif     Consensus sequence: VCACGTBV

Best Matches for Top Significant Motif ID 29 (Highest to Lowest)

Dataset #: 5
Motif ID: 53
Motif name: HIF1AARNT
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0

Alignment:
VBACGTGV
VBACGTGV

Original motif     Consensus sequence: VBACGTGV Reverse complement motif     Consensus sequence: VCACGTBV


Dataset #: 5
Motif ID: 57
Motif name: Mycn
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0575825

Alignment:
GCCACGTGSD
-VBACGTGV-

Original motif     Consensus sequence: HSCACGTGGC Reverse complement motif     Consensus sequence: GCCACGTGSD


Dataset #: 5
Motif ID: 58
Motif name: Myc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0597215

Alignment:
DCCACGTGCV
-VBACGTGV-

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV


Dataset #: 4
Motif ID: 40
Motif name: kcACCTGCAgc
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0748197

Alignment:
GBTGCAGGTGB
---VCACGTBV

Original motif     Consensus sequence: BCACCTGCABC Reverse complement motif     Consensus sequence: GBTGCAGGTGB


Dataset #: 4
Motif ID: 42
Motif name: sSGTCACGTGACSs
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0767561

Alignment:
SGGTCACGTGACCS
---VCACGTBV---

Original motif     Consensus sequence: SGGTCACGTGACCS Reverse complement motif     Consensus sequence: SGGTCACGTGACCS


Dataset #: 5
Motif ID: 50
Motif name: MIZF
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0829928

Alignment:
GCGGACGTTV
--VCACGTBV

Original motif     Consensus sequence: BAACGTCCGC Reverse complement motif     Consensus sequence: GCGGACGTTV


Dataset #: 5
Motif ID: 55
Motif name: Pax5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 8
Number of overlap: 8
Similarity score: 0.100962

Alignment:
MSGKKRCGCWDCABTGBBCD
-----VCACGTBV-------

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 4
Motif ID: 44
Motif name: dhACATTCTkh
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.109275

Alignment:
DHACATTCTGH
VCACGTBV---

Original motif     Consensus sequence: DHACATTCTGH Reverse complement motif     Consensus sequence: HCAGAATGTHD


Dataset #: 5
Motif ID: 59
Motif name: GABPA
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.110088

Alignment:
CCGGAAGTGVV
--VCACGTBV-

Original motif     Consensus sequence: CCGGAAGTGVV Reverse complement motif     Consensus sequence: VVCACTTCCGG


Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.116389

Alignment:
BBGGGGCGGGGCVD
---VBACGTGV---

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD


Dataset #: 5 Motif ID: 51 Motif name: Klf4

Original motif     Consensus sequence: DGGGYGKGGC Reverse complement motif     Consensus sequence: GCCYCMCCCD

Best Matches for Top Significant Motif ID 51 (Highest to Lowest)

Dataset #: 3
Motif ID: 27
Motif name: Klf4
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0

Alignment:
DGGGYGKGGC
DGGGYGKGGC

Original motif     Consensus sequence: DGGGYGKGGC Reverse complement motif     Consensus sequence: GCCYCMCCCD


Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 10
Similarity score: 0.0516385

Alignment:
CSKCCCCGCCCCSY
--GCCYCMCCCD--

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG


Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 10
Similarity score: 0.0524114

Alignment:
HVGCCCCGCCCCBB
--GCCYCMCCCD--

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD


Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 10
Similarity score: 0.0558821

Alignment:
BCCGCCCCGCCCCBB
--GCCYCMCCCD---

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB


Dataset #: 3
Motif ID: 22
Motif name: Zfx
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 10
Similarity score: 0.0987519

Alignment:
BBVGCCBVGGCCTV
-GCCYCMCCCD---

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB


Dataset #: 3
Motif ID: 24
Motif name: SP1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.102706

Alignment:
GGGGGYGGGG
DGGGYGKGGC

Original motif     Consensus sequence: CCCCKCCCCC Reverse complement motif     Consensus sequence: GGGGGYGGGG


Dataset #: 3
Motif ID: 34
Motif name: Myc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.105078

Alignment:
VGCACGTGGH
DGGGYGKGGC

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV


Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 9
Number of overlap: 10
Similarity score: 0.105953

Alignment:
DGVBCABTGDWGCGKRRCSR
--------DGGGYGKGGC--

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 3
Motif ID: 33
Motif name: Mycn
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.10603

Alignment:
HSCACGTGGC
DGGGYGKGGC

Original motif     Consensus sequence: HSCACGTGGC Reverse complement motif     Consensus sequence: GCCACGTGSD


Dataset #: 2
Motif ID: 2
Motif name: Motif 2
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 10
Similarity score: 0.110488

Alignment:
MTMMTCMMTCTKCK
-GCCYCMCCCD---

Original motif     Consensus sequence: RGRAGARRGARRAR Reverse complement motif     Consensus sequence: MTMMTCMMTCTKCK


Dataset #: 3 Motif ID: 27 Motif name: Klf4

Original motif     Consensus sequence: DGGGYGKGGC Reverse complement motif     Consensus sequence: GCCYCMCCCD

Best Matches for Top Significant Motif ID 27 (Highest to Lowest)

Dataset #: 5
Motif ID: 51
Motif name: Klf4
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0

Alignment:
DGGGYGKGGC
DGGGYGKGGC

Original motif     Consensus sequence: DGGGYGKGGC Reverse complement motif     Consensus sequence: GCCYCMCCCD


Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 10
Similarity score: 0.0516385

Alignment:
CSKCCCCGCCCCSY
--GCCYCMCCCD--

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG


Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 10
Similarity score: 0.0524114

Alignment:
BBGGGGCGGGGCVD
--DGGGYGKGGC--

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD


Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 10
Similarity score: 0.0558821

Alignment:
BBGGGGCGGGGCGGB
--DGGGYGKGGC---

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB


Dataset #: 5
Motif ID: 46
Motif name: Zfx
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 10
Similarity score: 0.0987519

Alignment:
VAGGCCBBGGCVBB
-DGGGYGKGGC---

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB


Dataset #: 5
Motif ID: 48
Motif name: SP1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.102706

Alignment:
CCCCKCCCCC
GCCYCMCCCD

Original motif     Consensus sequence: CCCCKCCCCC Reverse complement motif     Consensus sequence: GGGGGYGGGG


Dataset #: 5
Motif ID: 58
Motif name: Myc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.105078

Alignment:
VGCACGTGGH
DGGGYGKGGC

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV


Dataset #: 5
Motif ID: 55
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 9
Number of overlap: 10
Similarity score: 0.105953

Alignment:
DGVBCABTGDWGCGKRRCSR
--------DGGGYGKGGC--

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 5
Motif ID: 57
Motif name: Mycn
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.10603

Alignment:
HSCACGTGGC
DGGGYGKGGC

Original motif     Consensus sequence: HSCACGTGGC Reverse complement motif     Consensus sequence: GCCACGTGSD


Dataset #: 2
Motif ID: 2
Motif name: Motif 2
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 10
Similarity score: 0.110488

Alignment:
MTMMTCMMTCTKCK
-GCCYCMCCCD---

Original motif     Consensus sequence: RGRAGARRGARRAR Reverse complement motif     Consensus sequence: MTMMTCMMTCTKCK



Significant Motifs - Global and Local Matching (Highest to Lowest)

Dataset #: 4 Motif ID: 45 Motif name: wbgTAAATAww

Original motif     Consensus sequence: DBGTAAATAHD Reverse complement motif     Consensus sequence: DHTATTTACBD

Best Matches for Significant Motif ID 45 (Highest to Lowest)

Dataset #: 4
Motif ID: 37
Motif name: tkAAATAATAtw
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.00892084

Alignment:
HDAAATAATAHW
-DBGTAAATAHD

Original motif     Consensus sequence: HDAAATAATAHW Reverse complement motif     Consensus sequence: WHTATTATTTDH


Dataset #: 4
Motif ID: 41
Motif name: wwAAATAATAtw
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.00917337

Alignment:
DDTATTATTTDH
DHTATTTACBD-

Original motif     Consensus sequence: HDAAATAATADD Reverse complement motif     Consensus sequence: DDTATTATTTDH


Dataset #: 2
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 11
Similarity score: 0.0177412

Alignment:
AATHATATWTHAAA
DHTATTTACBD---

Original motif     Consensus sequence: AATHATATWTHAAA Reverse complement motif     Consensus sequence: TTTDAWATATHATT


Dataset #: 2
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0205821

Alignment:
AATTYDGAARTAWW
---DBGTAAATAHD

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT


Dataset #: 2
Motif ID: 4
Motif name: Motif 4
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0288058

Alignment:
AAAAWTTRCWT
DHTATTTACBD

Original motif     Consensus sequence: AAAAWTTRCWT Reverse complement motif     Consensus sequence: AWGKAAWTTTT


Dataset #: 2
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.0337252

Alignment:
AWAAAWTWAAASWA
--DHTATTTACBD-

Original motif     Consensus sequence: AWAAAWTWAAASWA Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT


Dataset #: 4
Motif ID: 43
Motif name: wsTACwGTAsw
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0399273

Alignment:
HVTACWGTABD
DHTATTTACBD

Original motif     Consensus sequence: HVTACWGTABD Reverse complement motif     Consensus sequence: DBTACWGTAVH


Dataset #: 2
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0404685

Alignment:
AWTAAATAYAATTT
---DHTATTTACBD

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT


Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 10
Number of overlap: 11
Similarity score: 0.0439858

Alignment:
DGVBCABTGDWGCGKRRCSR
DBGTAAATAHD---------

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 5
Motif ID: 55
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0439858

Alignment:
DGVBCABTGDWGCGKRRCSR
DBGTAAATAHD---------

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 4 Motif ID: 44 Motif name: dhACATTCTkh

Original motif     Consensus sequence: DHACATTCTGH Reverse complement motif     Consensus sequence: HCAGAATGTHD

Best Matches for Significant Motif ID 44 (Highest to Lowest)

Dataset #: 4
Motif ID: 40
Motif name: kcACCTGCAgc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0238442

Alignment:
BCACCTGCABC
DHACATTCTGH

Original motif     Consensus sequence: BCACCTGCABC Reverse complement motif     Consensus sequence: GBTGCAGGTGB


Dataset #: 2
Motif ID: 16
Motif name: Motif 16
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 11
Similarity score: 0.0258838

Alignment:
TCAAAATKAWTTGT
HCAGAATGTHD---

Original motif     Consensus sequence: ACAAWTRATTTTGA Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT


Dataset #: 4
Motif ID: 41
Motif name: wwAAATAATAtw
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.0292508

Alignment:
DDTATTATTTDH
-HCAGAATGTHD

Original motif     Consensus sequence: HDAAATAATADD Reverse complement motif     Consensus sequence: DDTATTATTTDH


Dataset #: 4
Motif ID: 37
Motif name: tkAAATAATAtw
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0364899

Alignment:
WHTATTATTTDH
-HCAGAATGTHD

Original motif     Consensus sequence: HDAAATAATAHW Reverse complement motif     Consensus sequence: WHTATTATTTDH


Dataset #: 2
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 11
Similarity score: 0.0400884

Alignment:
AATTYDGAARTAWW
HCAGAATGTHD---

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT


Dataset #: 4
Motif ID: 39
Motif name: kCAGCCAATmr
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0412582

Alignment:
MBATTGGCTGH
DHACATTCTGH

Original motif     Consensus sequence: DCAGCCAATVR Reverse complement motif     Consensus sequence: MBATTGGCTGH


Dataset #: 5
Motif ID: 59
Motif name: GABPA
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0418896

Alignment:
VVCACTTCCGG
DHACATTCTGH

Original motif     Consensus sequence: CCGGAAGTGVV Reverse complement motif     Consensus sequence: VVCACTTCCGG


Dataset #: 3
Motif ID: 35
Motif name: GABPA
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0418896

Alignment:
CCGGAAGTGVV
HCAGAATGTHD

Original motif     Consensus sequence: CCGGAAGTGVV Reverse complement motif     Consensus sequence: VVCACTTCCGG


Dataset #: 2
Motif ID: 15
Motif name: Motif 15
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.0448232

Alignment:
TTTTATTGTYAT
HCAGAATGTHD-

Original motif     Consensus sequence: ATMACAATAAAA Reverse complement motif     Consensus sequence: TTTTATTGTYAT


Dataset #: 2
Motif ID: 2
Motif name: Motif 2
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 11
Similarity score: 0.045689

Alignment:
RGRAGARRGARRAR
--HCAGAATGTHD-

Original motif     Consensus sequence: RGRAGARRGARRAR Reverse complement motif     Consensus sequence: MTMMTCMMTCTKCK


Dataset #: 4 Motif ID: 40 Motif name: kcACCTGCAgc

Original motif     Consensus sequence: BCACCTGCABC Reverse complement motif     Consensus sequence: GBTGCAGGTGB

Best Matches for Significant Motif ID 40 (Highest to Lowest)

Dataset #: 4
Motif ID: 43
Motif name: wsTACwGTAsw
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0215284

Alignment:
DBTACWGTAVH
BCACCTGCABC

Original motif     Consensus sequence: HVTACWGTABD Reverse complement motif     Consensus sequence: DBTACWGTAVH


Dataset #: 4
Motif ID: 44
Motif name: dhACATTCTkh
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0254134

Alignment:
DHACATTCTGH
BCACCTGCABC

Original motif     Consensus sequence: DHACATTCTGH Reverse complement motif     Consensus sequence: HCAGAATGTHD


Dataset #: 4
Motif ID: 42
Motif name: sSGTCACGTGACSs
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 11
Similarity score: 0.031338

Alignment:
SGGTCACGTGACCS
---BCACCTGCABC

Original motif     Consensus sequence: SGGTCACGTGACCS Reverse complement motif     Consensus sequence: SGGTCACGTGACCS


Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 11
Similarity score: 0.0402518

Alignment:
HVGCCCCGCCCCBB
-BCACCTGCABC--

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD


Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.0411257

Alignment:
CSKCCCCGCCCCSY
-BCACCTGCABC--

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG


Dataset #: 5
Motif ID: 55
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 6
Number of overlap: 11
Similarity score: 0.0420218

Alignment:
MSGKKRCGCWDCABTGBBCD
----BCACCTGCABC-----

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 11
Similarity score: 0.0420218

Alignment:
DGVBCABTGDWGCGKRRCSR
----GBTGCAGGTGB-----

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 3
Motif ID: 35
Motif name: GABPA
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0423275

Alignment:
CCGGAAGTGVV
GBTGCAGGTGB

Original motif     Consensus sequence: CCGGAAGTGVV Reverse complement motif     Consensus sequence: VVCACTTCCGG


Dataset #: 5
Motif ID: 59
Motif name: GABPA
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0423275

Alignment:
VVCACTTCCGG
BCACCTGCABC

Original motif     Consensus sequence: CCGGAAGTGVV Reverse complement motif     Consensus sequence: VVCACTTCCGG


Dataset #: 4
Motif ID: 39
Motif name: kCAGCCAATmr
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0439586

Alignment:
DCAGCCAATVR
GBTGCAGGTGB

Original motif     Consensus sequence: DCAGCCAATVR Reverse complement motif     Consensus sequence: MBATTGGCTGH


Dataset #: 2 Motif ID: 21 Motif name: Motif 21

Original motif     Consensus sequence: ATAAAA Reverse complement motif     Consensus sequence: TTTTAT

Best Matches for Significant Motif ID 21 (Highest to Lowest)

Dataset #: 2
Motif ID: 15
Motif name: Motif 15
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0

Alignment:
TTTTATTGTYAT
TTTTAT------

Original motif     Consensus sequence: ATMACAATAAAA Reverse complement motif     Consensus sequence: TTTTATTGTYAT


Dataset #: 2
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 6
Similarity score: 0.0208333

Alignment:
AAATTKTATTTAWT
---TTTTAT-----

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT


Dataset #: 2
Motif ID: 11
Motif name: Motif 11
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 5
Number of overlap: 6
Similarity score: 0.0208333

Alignment:
TTTCATWAAAT
-ATAAAA----

Original motif     Consensus sequence: ATTTWATGAAA Reverse complement motif     Consensus sequence: TTTCATWAAAT


Dataset #: 2
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 6
Similarity score: 0.0208333

Alignment:
TGATTTTAWKATTT
---TTTTAT-----

Original motif     Consensus sequence: AAATRWTAAAATCA Reverse complement motif     Consensus sequence: TGATTTTAWKATTT


Dataset #: 2
Motif ID: 10
Motif name: Motif 10
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 6
Similarity score: 0.0416667

Alignment:
TTTCATAAWT
----TTTTAT

Original motif     Consensus sequence: TTTCATAAWT Reverse complement motif     Consensus sequence: AWTTATGAAA


Dataset #: 2
Motif ID: 19
Motif name: Motif 19
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0.0625

Alignment:
TWTAATCTAWGAA
TTTTAT-------

Original motif     Consensus sequence: TTCWTAGATTAWA Reverse complement motif     Consensus sequence: TWTAATCTAWGAA


Dataset #: 2
Motif ID: 14
Motif name: Motif 14
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.0625

Alignment:
TTATTTWT
--TTTTAT

Original motif     Consensus sequence: AWAAATAA Reverse complement motif     Consensus sequence: TTATTTWT


Dataset #: 2
Motif ID: 20
Motif name: Motif 20
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.0625

Alignment:
AAATCTTTYAA
-----TTTTAT

Original motif     Consensus sequence: TTMAAAGATTT Reverse complement motif     Consensus sequence: AAATCTTTYAA


Dataset #: 4
Motif ID: 41
Motif name: wwAAATAATAtw
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 6
Similarity score: 0.0632716

Alignment:
DDTATTATTTDH
--TTTTAT----

Original motif     Consensus sequence: HDAAATAATADD Reverse complement motif     Consensus sequence: DDTATTATTTDH


Dataset #: 2
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 6
Similarity score: 0.0689103

Alignment:
TWSTTTWAWTTTWT
---TTTTAT-----

Original motif     Consensus sequence: AWAAAWTWAAASWA Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT


Dataset #: 3 Motif ID: 32 Motif name: ArntAhr

Original motif     Consensus sequence: YGCGTG Reverse complement motif     Consensus sequence: CACGCM

Best Matches for Significant Motif ID 32 (Highest to Lowest)

Dataset #: 5
Motif ID: 56
Motif name: ArntAhr
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0

Alignment:
YGCGTG
YGCGTG

Original motif     Consensus sequence: YGCGTG Reverse complement motif     Consensus sequence: CACGCM


Dataset #: 5
Motif ID: 47
Motif name: Egr1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.0340278

Alignment:
YCGCCCACGCH
-----CACGCM

Original motif     Consensus sequence: HGCGTGGGCGK Reverse complement motif     Consensus sequence: YCGCCCACGCH


Dataset #: 3
Motif ID: 23
Motif name: Egr1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0.0340278

Alignment:
HGCGTGGGCGK
YGCGTG-----

Original motif     Consensus sequence: HGCGTGGGCGK Reverse complement motif     Consensus sequence: YCGCCCACGCH


Dataset #: 3
Motif ID: 29
Motif name: HIF1AARNT
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.0452724

Alignment:
VBACGTGV
-YGCGTG-

Original motif     Consensus sequence: VBACGTGV Reverse complement motif     Consensus sequence: VCACGTBV


Dataset #: 5
Motif ID: 53
Motif name: HIF1AARNT
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.0452724

Alignment:
VBACGTGV
-YGCGTG-

Original motif     Consensus sequence: VBACGTGV Reverse complement motif     Consensus sequence: VCACGTBV


Dataset #: 5
Motif ID: 57
Motif name: Mycn
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 6
Similarity score: 0.0718227

Alignment:
GCCACGTGSD
--YGCGTG--

Original motif     Consensus sequence: HSCACGTGGC Reverse complement motif     Consensus sequence: GCCACGTGSD


Dataset #: 3
Motif ID: 33
Motif name: Mycn
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 6
Similarity score: 0.0718227

Alignment:
GCCACGTGSD
--YGCGTG--

Original motif     Consensus sequence: HSCACGTGGC Reverse complement motif     Consensus sequence: GCCACGTGSD


Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 6
Similarity score: 0.0736681

Alignment:
HVGCCCCGCCCCBB
----CACGCM----

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD


Dataset #: 3
Motif ID: 34
Motif name: Myc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 6
Similarity score: 0.0739492

Alignment:
DCCACGTGCV
--YGCGTG--

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV


Dataset #: 5
Motif ID: 58
Motif name: Myc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 6
Similarity score: 0.0739492

Alignment:
DCCACGTGCV
--YGCGTG--

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV


Dataset #: 5 Motif ID: 56 Motif name: ArntAhr

Original motif     Consensus sequence: YGCGTG Reverse complement motif     Consensus sequence: CACGCM

Best Matches for Significant Motif ID 56 (Highest to Lowest)

Dataset #: 3
Motif ID: 32
Motif name: ArntAhr
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0

Alignment:
YGCGTG
YGCGTG

Original motif     Consensus sequence: YGCGTG Reverse complement motif     Consensus sequence: CACGCM


Dataset #: 5
Motif ID: 47
Motif name: Egr1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.0340278

Alignment:
YCGCCCACGCH
-----CACGCM

Original motif     Consensus sequence: HGCGTGGGCGK Reverse complement motif     Consensus sequence: YCGCCCACGCH


Dataset #: 3
Motif ID: 23
Motif name: Egr1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0.0340278

Alignment:
HGCGTGGGCGK
YGCGTG-----

Original motif     Consensus sequence: HGCGTGGGCGK Reverse complement motif     Consensus sequence: YCGCCCACGCH


Dataset #: 5
Motif ID: 53
Motif name: HIF1AARNT
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.0452724

Alignment:
VBACGTGV
-YGCGTG-

Original motif     Consensus sequence: VBACGTGV Reverse complement motif     Consensus sequence: VCACGTBV


Dataset #: 3
Motif ID: 29
Motif name: HIF1AARNT
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.0452724

Alignment:
VBACGTGV
-YGCGTG-

Original motif     Consensus sequence: VBACGTGV Reverse complement motif     Consensus sequence: VCACGTBV


Dataset #: 3
Motif ID: 33
Motif name: Mycn
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 6
Similarity score: 0.0718227

Alignment:
HSCACGTGGC
--CACGCM--

Original motif     Consensus sequence: HSCACGTGGC Reverse complement motif     Consensus sequence: GCCACGTGSD


Dataset #: 5
Motif ID: 57
Motif name: Mycn
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 6
Similarity score: 0.0718227

Alignment:
GCCACGTGSD
--YGCGTG--

Original motif     Consensus sequence: HSCACGTGGC Reverse complement motif     Consensus sequence: GCCACGTGSD


Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 6
Similarity score: 0.0736681

Alignment:
BBGGGGCGGGGCVD
----YGCGTG----

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD


Dataset #: 5
Motif ID: 58
Motif name: Myc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 6
Similarity score: 0.0739492

Alignment:
DCCACGTGCV
--YGCGTG--

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV


Dataset #: 3
Motif ID: 34
Motif name: Myc
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.0739492

Alignment:
VGCACGTGGH
--CACGCM--

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV


Dataset #: 2 Motif ID: 10 Motif name: Motif 10

Original motif     Consensus sequence: TTTCATAAWT Reverse complement motif     Consensus sequence: AWTTATGAAA

Best Matches for Significant Motif ID 10 (Highest to Lowest)

Dataset #: 2
Motif ID: 11
Motif name: Motif 11
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.01875

Alignment:
ATTTWATGAAA
-AWTTATGAAA

Original motif     Consensus sequence: ATTTWATGAAA Reverse complement motif     Consensus sequence: TTTCATWAAAT


Dataset #: 2
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 10
Similarity score: 0.0375

Alignment:
AATTYDGAARTAWW
----AWTTATGAAA

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT


Dataset #: 2
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.04375

Alignment:
TGATTTTAWKATTT
-TTTCATAAWT---

Original motif     Consensus sequence: AAATRWTAAAATCA Reverse complement motif     Consensus sequence: TGATTTTAWKATTT


Dataset #: 2
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.05625

Alignment:
AWTAAATAYAATTT
----AWTTATGAAA

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT


Dataset #: 2
Motif ID: 17
Motif name: Motif 17
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.05625

Alignment:
ATTCATTTTT
TTTCATAAWT

Original motif     Consensus sequence: AAAAATGAAT Reverse complement motif     Consensus sequence: ATTCATTTTT


Dataset #: 2
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 10
Similarity score: 0.0604166

Alignment:
TTTDAWATATHATT
----TTTCATAAWT

Original motif     Consensus sequence: AATHATATWTHAAA Reverse complement motif     Consensus sequence: TTTDAWATATHATT


Dataset #: 2
Motif ID: 15
Motif name: Motif 15
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.06875

Alignment:
TTTTATTGTYAT
TTTCATAAWT--

Original motif     Consensus sequence: ATMACAATAAAA Reverse complement motif     Consensus sequence: TTTTATTGTYAT


Dataset #: 2
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0706731

Alignment:
AWAAAWTWAAASWA
----AWTTATGAAA

Original motif     Consensus sequence: AWAAAWTWAAASWA Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT


Dataset #: 2
Motif ID: 18
Motif name: Motif 18
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.08125

Alignment:
TTAGWTWATAA
TTTCATAAWT-

Original motif     Consensus sequence: TTAGWTWATAA Reverse complement motif     Consensus sequence: TTATWAWCTAA


Dataset #: 2
Motif ID: 19
Motif name: Motif 19
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 10
Similarity score: 0.08125

Alignment:
TWTAATCTAWGAA
TTTCATAAWT---

Original motif     Consensus sequence: TTCWTAGATTAWA Reverse complement motif     Consensus sequence: TWTAATCTAWGAA


Dataset #: 1 Motif ID: 1 Motif name: Motif 1

Original motif     Consensus sequence: GGCGGGGC Reverse complement motif     Consensus sequence: GCCCCGCC

Best Matches for Significant Motif ID 1 (Highest to Lowest)

Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 8
Similarity score: 0

Alignment:
HVGCCCCGCCCCBB
--GCCCCGCC----

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD


Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 8
Similarity score: 0.00250079

Alignment:
BCCGCCCCGCCCCBB
---GCCCCGCC----

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB


Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.0149958

Alignment:
MSGGGGCGGGGYSG
----GGCGGGGC--

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG


Dataset #: 5
Motif ID: 51
Motif name: Klf4
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0349983

Alignment:
DGGGYGKGGC
--GGCGGGGC

Original motif     Consensus sequence: DGGGYGKGGC Reverse complement motif     Consensus sequence: GCCYCMCCCD


Dataset #: 3
Motif ID: 27
Motif name: Klf4
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0349983

Alignment:
DGGGYGKGGC
--GGCGGGGC

Original motif     Consensus sequence: DGGGYGKGGC Reverse complement motif     Consensus sequence: GCCYCMCCCD


Dataset #: 3
Motif ID: 22
Motif name: Zfx
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0708224

Alignment:
VAGGCCBBGGCVBB
---GCCCCGCC---

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB


Dataset #: 5
Motif ID: 46
Motif name: Zfx
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0708224

Alignment:
VAGGCCBBGGCVBB
---GCCCCGCC---

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB


Dataset #: 5
Motif ID: 55
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0853847

Alignment:
DGVBCABTGDWGCGKRRCSR
----------GGCGGGGC--

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0853847

Alignment:
DGVBCABTGDWGCGKRRCSR
----------GGCGGGGC--

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 3
Motif ID: 23
Motif name: Egr1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0878731

Alignment:
HGCGTGGGCGK
GGCGGGGC---

Original motif     Consensus sequence: HGCGTGGGCGK Reverse complement motif     Consensus sequence: YCGCCCACGCH


Dataset #: 5
Motif ID: 47
Motif name: Egr1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0878731

Alignment:
HGCGTGGGCGK
GGCGGGGC---

Original motif     Consensus sequence: HGCGTGGGCGK Reverse complement motif     Consensus sequence: YCGCCCACGCH


Dataset #: 3 Motif ID: 29 Motif name: HIF1AARNT

Original motif     Consensus sequence: VBACGTGV Reverse complement motif     Consensus sequence: VCACGTBV

Best Matches for Significant Motif ID 29 (Highest to Lowest)

Dataset #: 5
Motif ID: 53
Motif name: HIF1AARNT
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0

Alignment:
VBACGTGV
VBACGTGV

Original motif     Consensus sequence: VBACGTGV Reverse complement motif     Consensus sequence: VCACGTBV


Dataset #: 5
Motif ID: 57
Motif name: Mycn
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0575825

Alignment:
GCCACGTGSD
-VBACGTGV-

Original motif     Consensus sequence: HSCACGTGGC Reverse complement motif     Consensus sequence: GCCACGTGSD


Dataset #: 3
Motif ID: 33
Motif name: Mycn
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0575825

Alignment:
GCCACGTGSD
-VBACGTGV-

Original motif     Consensus sequence: HSCACGTGGC Reverse complement motif     Consensus sequence: GCCACGTGSD


Dataset #: 5
Motif ID: 58
Motif name: Myc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0597215

Alignment:
DCCACGTGCV
-VBACGTGV-

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV


Dataset #: 3
Motif ID: 34
Motif name: Myc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0597215

Alignment:
DCCACGTGCV
-VBACGTGV-

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV


Dataset #: 4
Motif ID: 40
Motif name: kcACCTGCAgc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0748197

Alignment:
BCACCTGCABC
VBACGTGV---

Original motif     Consensus sequence: BCACCTGCABC Reverse complement motif     Consensus sequence: GBTGCAGGTGB


Dataset #: 4
Motif ID: 42
Motif name: sSGTCACGTGACSs
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0767561

Alignment:
SGGTCACGTGACCS
---VCACGTBV---

Original motif     Consensus sequence: SGGTCACGTGACCS Reverse complement motif     Consensus sequence: SGGTCACGTGACCS


Dataset #: 5
Motif ID: 50
Motif name: MIZF
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0829928

Alignment:
GCGGACGTTV
--VCACGTBV

Original motif     Consensus sequence: BAACGTCCGC Reverse complement motif     Consensus sequence: GCGGACGTTV


Dataset #: 3
Motif ID: 26
Motif name: MIZF
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0829928

Alignment:
GCGGACGTTV
--VCACGTBV

Original motif     Consensus sequence: BAACGTCCGC Reverse complement motif     Consensus sequence: GCGGACGTTV


Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 8
Number of overlap: 8
Similarity score: 0.100962

Alignment:
MSGKKRCGCWDCABTGBBCD
-----VCACGTBV-------

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 5 Motif ID: 53 Motif name: HIF1AARNT

Original motif     Consensus sequence: VBACGTGV Reverse complement motif     Consensus sequence: VCACGTBV

Best Matches for Significant Motif ID 53 (Highest to Lowest)

Dataset #: 3
Motif ID: 29
Motif name: HIF1AARNT
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0

Alignment:
VBACGTGV
VBACGTGV

Original motif     Consensus sequence: VBACGTGV Reverse complement motif     Consensus sequence: VCACGTBV


Dataset #: 5
Motif ID: 57
Motif name: Mycn
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0575825

Alignment:
GCCACGTGSD
-VBACGTGV-

Original motif     Consensus sequence: HSCACGTGGC Reverse complement motif     Consensus sequence: GCCACGTGSD


Dataset #: 3
Motif ID: 33
Motif name: Mycn
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0575825

Alignment:
GCCACGTGSD
-VBACGTGV-

Original motif     Consensus sequence: HSCACGTGGC Reverse complement motif     Consensus sequence: GCCACGTGSD


Dataset #: 5
Motif ID: 58
Motif name: Myc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0597215

Alignment:
DCCACGTGCV
-VBACGTGV-

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV


Dataset #: 3
Motif ID: 34
Motif name: Myc
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0597215

Alignment:
VGCACGTGGH
-VCACGTBV-

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV


Dataset #: 4
Motif ID: 40
Motif name: kcACCTGCAgc
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0748197

Alignment:
GBTGCAGGTGB
---VCACGTBV

Original motif     Consensus sequence: BCACCTGCABC Reverse complement motif     Consensus sequence: GBTGCAGGTGB


Dataset #: 4
Motif ID: 42
Motif name: sSGTCACGTGACSs
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0767561

Alignment:
SGGTCACGTGACCS
---VBACGTGV---

Original motif     Consensus sequence: SGGTCACGTGACCS Reverse complement motif     Consensus sequence: SGGTCACGTGACCS


Dataset #: 3
Motif ID: 26
Motif name: MIZF
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0829928

Alignment:
GCGGACGTTV
--VCACGTBV

Original motif     Consensus sequence: BAACGTCCGC Reverse complement motif     Consensus sequence: GCGGACGTTV


Dataset #: 5
Motif ID: 50
Motif name: MIZF
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0829928

Alignment:
GCGGACGTTV
--VCACGTBV

Original motif     Consensus sequence: BAACGTCCGC Reverse complement motif     Consensus sequence: GCGGACGTTV


Dataset #: 5
Motif ID: 55
Motif name: Pax5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 8
Number of overlap: 8
Similarity score: 0.100962

Alignment:
MSGKKRCGCWDCABTGBBCD
-----VCACGTBV-------

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD



Best Matches for Each Motif (Highest to Lowest)

Dataset #: 1 Motif ID: 1 Motif name: Motif 1

Original motif     Consensus sequence: GGCGGGGC Reverse complement motif     Consensus sequence: GCCCCGCC

Best Matches for Motif ID 1 (Highest to Lowest)

Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 8
Similarity score: 0

Alignment:
HVGCCCCGCCCCBB
--GCCCCGCC----

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD


Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 8
Similarity score: 0.00250079

Alignment:
BCCGCCCCGCCCCBB
---GCCCCGCC----

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB


Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.0149958

Alignment:
MSGGGGCGGGGYSG
----GGCGGGGC--

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG


Dataset #: 5
Motif ID: 51
Motif name: Klf4
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0349983

Alignment:
DGGGYGKGGC
--GGCGGGGC

Original motif     Consensus sequence: DGGGYGKGGC Reverse complement motif     Consensus sequence: GCCYCMCCCD


Dataset #: 3
Motif ID: 27
Motif name: Klf4
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0349983

Alignment:
DGGGYGKGGC
--GGCGGGGC

Original motif     Consensus sequence: DGGGYGKGGC Reverse complement motif     Consensus sequence: GCCYCMCCCD


Dataset #: 3
Motif ID: 22
Motif name: Zfx
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0708224

Alignment:
VAGGCCBBGGCVBB
---GCCCCGCC---

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB


Dataset #: 5
Motif ID: 46
Motif name: Zfx
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0708224

Alignment:
VAGGCCBBGGCVBB
---GCCCCGCC---

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB


Dataset #: 5
Motif ID: 55
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0853847

Alignment:
DGVBCABTGDWGCGKRRCSR
----------GGCGGGGC--

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0853847

Alignment:
DGVBCABTGDWGCGKRRCSR
----------GGCGGGGC--

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 3
Motif ID: 23
Motif name: Egr1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0878731

Alignment:
HGCGTGGGCGK
GGCGGGGC---

Original motif     Consensus sequence: HGCGTGGGCGK Reverse complement motif     Consensus sequence: YCGCCCACGCH


Dataset #: 5
Motif ID: 47
Motif name: Egr1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0878731

Alignment:
HGCGTGGGCGK
GGCGGGGC---

Original motif     Consensus sequence: HGCGTGGGCGK Reverse complement motif     Consensus sequence: YCGCCCACGCH


Dataset #: 2 Motif ID: 2 Motif name: Motif 2

Original motif     Consensus sequence: RGRAGARRGARRAR Reverse complement motif     Consensus sequence: MTMMTCMMTCTKCK

Best Matches for Motif ID 2 (Highest to Lowest)

Dataset #: 5
Motif ID: 55
Motif name: Pax5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 7
Number of overlap: 14
Similarity score: 0.0197704

Alignment:
MSGKKRCGCWDCABTGBBCD
------MTMMTCMMTCTKCK

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 7
Number of overlap: 14
Similarity score: 0.0197704

Alignment:
MSGKKRCGCWDCABTGBBCD
------MTMMTCMMTCTKCK

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 2
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 13
Similarity score: 0.547476

Alignment:
AWAAAWTWAAASWA-
-RGRAGARRGARRAR

Original motif     Consensus sequence: AWAAAWTWAAASWA Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT


Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 11
Similarity score: 1.54373

Alignment:
---MSGGGGCGGGGYSG
RGRAGARRGARRAR---

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG


Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 11
Similarity score: 1.54718

Alignment:
BBGGGGCGGGGCVD---
---RGRAGARRGARRAR

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD


Dataset #: 3
Motif ID: 24
Motif name: SP1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 2.0297

Alignment:
----GGGGGYGGGG
RGRAGARRGARRAR

Original motif     Consensus sequence: CCCCKCCCCC Reverse complement motif     Consensus sequence: GGGGGYGGGG


Dataset #: 5
Motif ID: 48
Motif name: SP1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 2.0297

Alignment:
----GGGGGYGGGG
RGRAGARRGARRAR

Original motif     Consensus sequence: CCCCKCCCCC Reverse complement motif     Consensus sequence: GGGGGYGGGG


Dataset #: 4
Motif ID: 45
Motif name: wbgTAAATAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 2.03935

Alignment:
----DHTATTTACBD
MTMMTCMMTCTKCK-

Original motif     Consensus sequence: DBGTAAATAHD Reverse complement motif     Consensus sequence: DHTATTTACBD


Dataset #: 3
Motif ID: 30
Motif name: PLAG1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 10
Similarity score: 2.04042

Alignment:
----GGGGCCCAAGGGGG
RGRAGARRGARRAR----

Original motif     Consensus sequence: GGGGCCCAAGGGGG Reverse complement motif     Consensus sequence: CCCCCTTGGGCCCC


Dataset #: 5
Motif ID: 54
Motif name: PLAG1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 10
Similarity score: 2.04042

Alignment:
----GGGGCCCAAGGGGG
RGRAGARRGARRAR----

Original motif     Consensus sequence: GGGGCCCAAGGGGG Reverse complement motif     Consensus sequence: CCCCCTTGGGCCCC


Dataset #: 2 Motif ID: 3 Motif name: Motif 3

Original motif     Consensus sequence: AWAAAWTWAAASWA Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

Best Matches for Motif ID 3 (Highest to Lowest)

Dataset #: 2
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0394231

Alignment:
TGATTTTAWKATTT
TWSTTTWAWTTTWT

Original motif     Consensus sequence: AAATRWTAAAATCA Reverse complement motif     Consensus sequence: TGATTTTAWKATTT


Dataset #: 2
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0449176

Alignment:
AAATTKTATTTAWT
TWSTTTWAWTTTWT

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT


Dataset #: 2
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0594551

Alignment:
TTTDAWATATHATT
AWAAAWTWAAASWA

Original motif     Consensus sequence: AATHATATWTHAAA Reverse complement motif     Consensus sequence: TTTDAWATATHATT


Dataset #: 2
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.067239

Alignment:
WWTAKTTCDKAATT
TWSTTTWAWTTTWT

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT


Dataset #: 2
Motif ID: 2
Motif name: Motif 2
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 13
Similarity score: 0.564853

Alignment:
-RGRAGARRGARRAR
AWAAAWTWAAASWA-

Original motif     Consensus sequence: RGRAGARRGARRAR Reverse complement motif     Consensus sequence: MTMMTCMMTCTKCK


Dataset #: 4
Motif ID: 41
Motif name: wwAAATAATAtw
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 1.04022

Alignment:
HDAAATAATADD--
AWAAAWTWAAASWA

Original motif     Consensus sequence: HDAAATAATADD Reverse complement motif     Consensus sequence: DDTATTATTTDH


Dataset #: 4
Motif ID: 37
Motif name: tkAAATAATAtw
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 1.04989

Alignment:
--HDAAATAATAHW
AWAAAWTWAAASWA

Original motif     Consensus sequence: HDAAATAATAHW Reverse complement motif     Consensus sequence: WHTATTATTTDH


Dataset #: 2
Motif ID: 15
Motif name: Motif 15
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 1.05785

Alignment:
ATMACAATAAAA--
AWAAAWTWAAASWA

Original motif     Consensus sequence: ATMACAATAAAA Reverse complement motif     Consensus sequence: TTTTATTGTYAT


Dataset #: 4
Motif ID: 45
Motif name: wbgTAAATAww
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 1.55185

Alignment:
---DBGTAAATAHD
AWAAAWTWAAASWA

Original motif     Consensus sequence: DBGTAAATAHD Reverse complement motif     Consensus sequence: DHTATTTACBD


Dataset #: 2
Motif ID: 4
Motif name: Motif 4
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 1.55323

Alignment:
---AWGKAAWTTTT
TWSTTTWAWTTTWT

Original motif     Consensus sequence: AAAAWTTRCWT Reverse complement motif     Consensus sequence: AWGKAAWTTTT


Dataset #: 2 Motif ID: 4 Motif name: Motif 4

Original motif     Consensus sequence: AAAAWTTRCWT Reverse complement motif     Consensus sequence: AWGKAAWTTTT

Best Matches for Motif ID 4 (Highest to Lowest)

Dataset #: 2
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0786484

Alignment:
AAATTKTATTTAWT
AAAAWTTRCWT---

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT


Dataset #: 2
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 11
Similarity score: 0.0820375

Alignment:
AATHATATWTHAAA
AWGKAAWTTTT---

Original motif     Consensus sequence: AATHATATWTHAAA Reverse complement motif     Consensus sequence: TTTDAWATATHATT


Dataset #: 2
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 11
Similarity score: 0.083433

Alignment:
TGATTTTAWKATTT
---AWGKAAWTTTT

Original motif     Consensus sequence: AAATRWTAAAATCA Reverse complement motif     Consensus sequence: TGATTTTAWKATTT


Dataset #: 2
Motif ID: 16
Motif name: Motif 16
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0852273

Alignment:
ACAAWTRATTTTGA
AAAAWTTRCWT---

Original motif     Consensus sequence: ACAAWTRATTTTGA Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT


Dataset #: 4
Motif ID: 45
Motif name: wbgTAAATAww
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.086338

Alignment:
DHTATTTACBD
AAAAWTTRCWT

Original motif     Consensus sequence: DBGTAAATAHD Reverse complement motif     Consensus sequence: DHTATTTACBD


Dataset #: 2
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.0867914

Alignment:
TWSTTTWAWTTTWT
--AWGKAAWTTTT-

Original motif     Consensus sequence: AWAAAWTWAAASWA Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT


Dataset #: 2
Motif ID: 20
Motif name: Motif 20
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0941986

Alignment:
AAATCTTTYAA
AAAAWTTRCWT

Original motif     Consensus sequence: TTMAAAGATTT Reverse complement motif     Consensus sequence: AAATCTTTYAA


Dataset #: 4
Motif ID: 41
Motif name: wwAAATAATAtw
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.097632

Alignment:
HDAAATAATADD
AAAAWTTRCWT-

Original motif     Consensus sequence: HDAAATAATADD Reverse complement motif     Consensus sequence: DDTATTATTTDH


Dataset #: 4
Motif ID: 37
Motif name: tkAAATAATAtw
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.102771

Alignment:
HDAAATAATAHW
AAAAWTTRCWT-

Original motif     Consensus sequence: HDAAATAATAHW Reverse complement motif     Consensus sequence: WHTATTATTTDH


Dataset #: 2
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.103618

Alignment:
AATTYDGAARTAWW
---AWGKAAWTTTT

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT


Dataset #: 2 Motif ID: 5 Motif name: Motif 5

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

Best Matches for Motif ID 5 (Highest to Lowest)

Dataset #: 2
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.101648

Alignment:
TWSTTTWAWTTTWT
AAATTKTATTTAWT

Original motif     Consensus sequence: AWAAAWTWAAASWA Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT


Dataset #: 2
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.107143

Alignment:
TGATTTTAWKATTT
AAATTKTATTTAWT

Original motif     Consensus sequence: AAATRWTAAAATCA Reverse complement motif     Consensus sequence: TGATTTTAWKATTT


Dataset #: 2
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.111607

Alignment:
AATTYDGAARTAWW
AAATTKTATTTAWT

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT


Dataset #: 2
Motif ID: 16
Motif name: Motif 16
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.125

Alignment:
ACAAWTRATTTTGA
AAATTKTATTTAWT

Original motif     Consensus sequence: ACAAWTRATTTTGA Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT


Dataset #: 2
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 13
Similarity score: 0.596154

Alignment:
TTTDAWATATHATT-
-AWTAAATAYAATTT

Original motif     Consensus sequence: AATHATATWTHAAA Reverse complement motif     Consensus sequence: TTTDAWATATHATT


Dataset #: 2
Motif ID: 19
Motif name: Motif 19
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 12
Similarity score: 1.125

Alignment:
--TTCWTAGATTAWA
AWTAAATAYAATTT-

Original motif     Consensus sequence: TTCWTAGATTAWA Reverse complement motif     Consensus sequence: TWTAATCTAWGAA


Dataset #: 2
Motif ID: 15
Motif name: Motif 15
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 1.125

Alignment:
--TTTTATTGTYAT
AAATTKTATTTAWT

Original motif     Consensus sequence: ATMACAATAAAA Reverse complement motif     Consensus sequence: TTTTATTGTYAT


Dataset #: 2
Motif ID: 11
Motif name: Motif 11
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 1.57955

Alignment:
---TTTCATWAAAT
AAATTKTATTTAWT

Original motif     Consensus sequence: ATTTWATGAAA Reverse complement motif     Consensus sequence: TTTCATWAAAT


Dataset #: 2
Motif ID: 4
Motif name: Motif 4
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 1.5951

Alignment:
AWGKAAWTTTT---
AWTAAATAYAATTT

Original motif     Consensus sequence: AAAAWTTRCWT Reverse complement motif     Consensus sequence: AWGKAAWTTTT


Dataset #: 2
Motif ID: 20
Motif name: Motif 20
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 1.61364

Alignment:
AAATCTTTYAA---
AAATTKTATTTAWT

Original motif     Consensus sequence: TTMAAAGATTT Reverse complement motif     Consensus sequence: AAATCTTTYAA


Dataset #: 2 Motif ID: 6 Motif name: Motif 6

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

Best Matches for Motif ID 6 (Highest to Lowest)

Dataset #: 2
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0741071

Alignment:
AWTAAATAYAATTT
WWTAKTTCDKAATT

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT


Dataset #: 2
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0763393

Alignment:
TGATTTTAWKATTT
WWTAKTTCDKAATT

Original motif     Consensus sequence: AAATRWTAAAATCA Reverse complement motif     Consensus sequence: TGATTTTAWKATTT


Dataset #: 2
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0852679

Alignment:
TTTDAWATATHATT
WWTAKTTCDKAATT

Original motif     Consensus sequence: AATHATATWTHAAA Reverse complement motif     Consensus sequence: TTTDAWATATHATT


Dataset #: 2
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0864698

Alignment:
TWSTTTWAWTTTWT
WWTAKTTCDKAATT

Original motif     Consensus sequence: AWAAAWTWAAASWA Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT


Dataset #: 2
Motif ID: 19
Motif name: Motif 19
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 12
Similarity score: 1.06667

Alignment:
--TTCWTAGATTAWA
AATTYDGAARTAWW-

Original motif     Consensus sequence: TTCWTAGATTAWA Reverse complement motif     Consensus sequence: TWTAATCTAWGAA


Dataset #: 4
Motif ID: 37
Motif name: tkAAATAATAtw
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 1.07587

Alignment:
WHTATTATTTDH--
WWTAKTTCDKAATT

Original motif     Consensus sequence: HDAAATAATAHW Reverse complement motif     Consensus sequence: WHTATTATTTDH


Dataset #: 4
Motif ID: 41
Motif name: wwAAATAATAtw
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 1.07757

Alignment:
DDTATTATTTDH--
WWTAKTTCDKAATT

Original motif     Consensus sequence: HDAAATAATADD Reverse complement motif     Consensus sequence: DDTATTATTTDH


Dataset #: 2
Motif ID: 15
Motif name: Motif 15
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 1.08229

Alignment:
TTTTATTGTYAT--
WWTAKTTCDKAATT

Original motif     Consensus sequence: ATMACAATAAAA Reverse complement motif     Consensus sequence: TTTTATTGTYAT


Dataset #: 2
Motif ID: 16
Motif name: Motif 16
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 11
Similarity score: 1.55625

Alignment:
ACAAWTRATTTTGA---
---WWTAKTTCDKAATT

Original motif     Consensus sequence: ACAAWTRATTTTGA Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT


Dataset #: 4
Motif ID: 45
Motif name: wbgTAAATAww
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 1.55706

Alignment:
---DBGTAAATAHD
AATTYDGAARTAWW

Original motif     Consensus sequence: DBGTAAATAHD Reverse complement motif     Consensus sequence: DHTATTTACBD


Dataset #: 2 Motif ID: 7 Motif name: Motif 7

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG

Best Matches for Motif ID 7 (Highest to Lowest)

Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0

Alignment:
HVGCCCCGCCCCBB
CSKCCCCGCCCCSY

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD


Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0012818

Alignment:
BCCGCCCCGCCCCBB
-CSKCCCCGCCCCSY

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB


Dataset #: 5
Motif ID: 55
Motif name: Pax5
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 7
Number of overlap: 14
Similarity score: 0.0662825

Alignment:
DGVBCABTGDWGCGKRRCSR
------MSGGGGCGGGGYSG

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 7
Number of overlap: 14
Similarity score: 0.0662825

Alignment:
DGVBCABTGDWGCGKRRCSR
------MSGGGGCGGGGYSG

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 3
Motif ID: 22
Motif name: Zfx
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0912118

Alignment:
VAGGCCBBGGCVBB
CSKCCCCGCCCCSY

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB


Dataset #: 5
Motif ID: 46
Motif name: Zfx
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0912118

Alignment:
VAGGCCBBGGCVBB
CSKCCCCGCCCCSY

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB


Dataset #: 4
Motif ID: 42
Motif name: sSGTCACGTGACSs
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0948838

Alignment:
SGGTCACGTGACCS
MSGGGGCGGGGYSG

Original motif     Consensus sequence: SGGTCACGTGACCS Reverse complement motif     Consensus sequence: SGGTCACGTGACCS


Dataset #: 3
Motif ID: 30
Motif name: PLAG1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 13
Similarity score: 0.590412

Alignment:
CCCCCTTGGGCCCC-
-CSKCCCCGCCCCSY

Original motif     Consensus sequence: GGGGCCCAAGGGGG Reverse complement motif     Consensus sequence: CCCCCTTGGGCCCC


Dataset #: 5
Motif ID: 54
Motif name: PLAG1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 13
Similarity score: 0.590412

Alignment:
CCCCCTTGGGCCCC-
-CSKCCCCGCCCCSY

Original motif     Consensus sequence: GGGGCCCAAGGGGG Reverse complement motif     Consensus sequence: CCCCCTTGGGCCCC


Dataset #: 3
Motif ID: 23
Motif name: Egr1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 1.58474

Alignment:
YCGCCCACGCH---
CSKCCCCGCCCCSY

Original motif     Consensus sequence: HGCGTGGGCGK Reverse complement motif     Consensus sequence: YCGCCCACGCH


Dataset #: 2 Motif ID: 8 Motif name: Motif 8

Original motif     Consensus sequence: AAATRWTAAAATCA Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

Best Matches for Motif ID 8 (Highest to Lowest)

Dataset #: 2
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0961539

Alignment:
TWSTTTWAWTTTWT
TGATTTTAWKATTT

Original motif     Consensus sequence: AWAAAWTWAAASWA Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT


Dataset #: 2
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.107143

Alignment:
AAATTKTATTTAWT
TGATTTTAWKATTT

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT


Dataset #: 2
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.113839

Alignment:
WWTAKTTCDKAATT
TGATTTTAWKATTT

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT


Dataset #: 2
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 13
Similarity score: 0.625

Alignment:
-AATHATATWTHAAA
AAATRWTAAAATCA-

Original motif     Consensus sequence: AATHATATWTHAAA Reverse complement motif     Consensus sequence: TTTDAWATATHATT


Dataset #: 2
Motif ID: 15
Motif name: Motif 15
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 1.10417

Alignment:
--ATMACAATAAAA
AAATRWTAAAATCA

Original motif     Consensus sequence: ATMACAATAAAA Reverse complement motif     Consensus sequence: TTTTATTGTYAT


Dataset #: 2
Motif ID: 19
Motif name: Motif 19
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 12
Similarity score: 1.10417

Alignment:
TWTAATCTAWGAA--
-TGATTTTAWKATTT

Original motif     Consensus sequence: TTCWTAGATTAWA Reverse complement motif     Consensus sequence: TWTAATCTAWGAA


Dataset #: 2
Motif ID: 16
Motif name: Motif 16
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 12
Similarity score: 1.125

Alignment:
--TCAAAATKAWTTGT
TGATTTTAWKATTT--

Original motif     Consensus sequence: ACAAWTRATTTTGA Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT


Dataset #: 2
Motif ID: 20
Motif name: Motif 20
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 1.56818

Alignment:
---TTMAAAGATTT
TGATTTTAWKATTT

Original motif     Consensus sequence: TTMAAAGATTT Reverse complement motif     Consensus sequence: AAATCTTTYAA


Dataset #: 2
Motif ID: 11
Motif name: Motif 11
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 1.59091

Alignment:
---TTTCATWAAAT
TGATTTTAWKATTT

Original motif     Consensus sequence: ATTTWATGAAA Reverse complement motif     Consensus sequence: TTTCATWAAAT


Dataset #: 2
Motif ID: 4
Motif name: Motif 4
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 1.59988

Alignment:
---AWGKAAWTTTT
TGATTTTAWKATTT

Original motif     Consensus sequence: AAAAWTTRCWT Reverse complement motif     Consensus sequence: AWGKAAWTTTT


Dataset #: 2 Motif ID: 9 Motif name: Motif 9

Original motif     Consensus sequence: AATHATATWTHAAA Reverse complement motif     Consensus sequence: TTTDAWATATHATT

Best Matches for Motif ID 9 (Highest to Lowest)

Dataset #: 2
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0675748

Alignment:
TWSTTTWAWTTTWT
AATHATATWTHAAA

Original motif     Consensus sequence: AWAAAWTWAAASWA Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT


Dataset #: 2
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0741568

Alignment:
WWTAKTTCDKAATT
TTTDAWATATHATT

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT


Dataset #: 2
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 13
Similarity score: 0.547543

Alignment:
-AAATTKTATTTAWT
AATHATATWTHAAA-

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT


Dataset #: 2
Motif ID: 19
Motif name: Motif 19
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 13
Similarity score: 0.557158

Alignment:
-TTCWTAGATTAWA
AATHATATWTHAAA

Original motif     Consensus sequence: TTCWTAGATTAWA Reverse complement motif     Consensus sequence: TWTAATCTAWGAA


Dataset #: 2
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 13
Similarity score: 0.576389

Alignment:
AAATRWTAAAATCA-
-AATHATATWTHAAA

Original motif     Consensus sequence: AAATRWTAAAATCA Reverse complement motif     Consensus sequence: TGATTTTAWKATTT


Dataset #: 4
Motif ID: 41
Motif name: wwAAATAATAtw
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 1.03318

Alignment:
--HDAAATAATADD
TTTDAWATATHATT

Original motif     Consensus sequence: HDAAATAATADD Reverse complement motif     Consensus sequence: DDTATTATTTDH


Dataset #: 4
Motif ID: 37
Motif name: tkAAATAATAtw
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 1.03819

Alignment:
--HDAAATAATAHW
TTTDAWATATHATT

Original motif     Consensus sequence: HDAAATAATAHW Reverse complement motif     Consensus sequence: WHTATTATTTDH


Dataset #: 2
Motif ID: 16
Motif name: Motif 16
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 12
Similarity score: 1.05903

Alignment:
--TCAAAATKAWTTGT
TTTDAWATATHATT--

Original motif     Consensus sequence: ACAAWTRATTTTGA Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT


Dataset #: 4
Motif ID: 45
Motif name: wbgTAAATAww
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 1.54311

Alignment:
---DHTATTTACBD
AATHATATWTHAAA

Original motif     Consensus sequence: DBGTAAATAHD Reverse complement motif     Consensus sequence: DHTATTTACBD


Dataset #: 2
Motif ID: 4
Motif name: Motif 4
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 1.54987

Alignment:
AAAAWTTRCWT---
TTTDAWATATHATT

Original motif     Consensus sequence: AAAAWTTRCWT Reverse complement motif     Consensus sequence: AWGKAAWTTTT


Dataset #: 2 Motif ID: 10 Motif name: Motif 10

Original motif     Consensus sequence: TTTCATAAWT Reverse complement motif     Consensus sequence: AWTTATGAAA

Best Matches for Motif ID 10 (Highest to Lowest)

Dataset #: 2
Motif ID: 11
Motif name: Motif 11
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.01875

Alignment:
ATTTWATGAAA
-AWTTATGAAA

Original motif     Consensus sequence: ATTTWATGAAA Reverse complement motif     Consensus sequence: TTTCATWAAAT


Dataset #: 2
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 10
Similarity score: 0.0375

Alignment:
AATTYDGAARTAWW
----AWTTATGAAA

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT


Dataset #: 2
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.04375

Alignment:
TGATTTTAWKATTT
-TTTCATAAWT---

Original motif     Consensus sequence: AAATRWTAAAATCA Reverse complement motif     Consensus sequence: TGATTTTAWKATTT


Dataset #: 2
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.05625

Alignment:
AWTAAATAYAATTT
----AWTTATGAAA

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT


Dataset #: 2
Motif ID: 17
Motif name: Motif 17
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.05625

Alignment:
ATTCATTTTT
TTTCATAAWT

Original motif     Consensus sequence: AAAAATGAAT Reverse complement motif     Consensus sequence: ATTCATTTTT


Dataset #: 2
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 10
Similarity score: 0.0604166

Alignment:
TTTDAWATATHATT
----TTTCATAAWT

Original motif     Consensus sequence: AATHATATWTHAAA Reverse complement motif     Consensus sequence: TTTDAWATATHATT


Dataset #: 2
Motif ID: 15
Motif name: Motif 15
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.06875

Alignment:
TTTTATTGTYAT
TTTCATAAWT--

Original motif     Consensus sequence: ATMACAATAAAA Reverse complement motif     Consensus sequence: TTTTATTGTYAT


Dataset #: 2
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0706731

Alignment:
AWAAAWTWAAASWA
----AWTTATGAAA

Original motif     Consensus sequence: AWAAAWTWAAASWA Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT


Dataset #: 2
Motif ID: 18
Motif name: Motif 18
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.08125

Alignment:
TTAGWTWATAA
TTTCATAAWT-

Original motif     Consensus sequence: TTAGWTWATAA Reverse complement motif     Consensus sequence: TTATWAWCTAA


Dataset #: 2
Motif ID: 19
Motif name: Motif 19
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 10
Similarity score: 0.08125

Alignment:
TWTAATCTAWGAA
TTTCATAAWT---

Original motif     Consensus sequence: TTCWTAGATTAWA Reverse complement motif     Consensus sequence: TWTAATCTAWGAA


Dataset #: 2 Motif ID: 11 Motif name: Motif 11

Original motif     Consensus sequence: ATTTWATGAAA Reverse complement motif     Consensus sequence: TTTCATWAAAT

Best Matches for Motif ID 11 (Highest to Lowest)

Dataset #: 2
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 11
Similarity score: 0.0795455

Alignment:
AWTAAATAYAATTT
--TTTCATWAAAT-

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT


Dataset #: 2
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.0795455

Alignment:
AAATRWTAAAATCA
--TTTCATWAAAT-

Original motif     Consensus sequence: AAATRWTAAAATCA Reverse complement motif     Consensus sequence: TGATTTTAWKATTT


Dataset #: 2
Motif ID: 18
Motif name: Motif 18
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.102273

Alignment:
TTATWAWCTAA
ATTTWATGAAA

Original motif     Consensus sequence: TTAGWTWATAA Reverse complement motif     Consensus sequence: TTATWAWCTAA


Dataset #: 2
Motif ID: 15
Motif name: Motif 15
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.102273

Alignment:
TTTTATTGTYAT
ATTTWATGAAA-

Original motif     Consensus sequence: ATMACAATAAAA Reverse complement motif     Consensus sequence: TTTTATTGTYAT


Dataset #: 2
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.109848

Alignment:
AATHATATWTHAAA
---ATTTWATGAAA

Original motif     Consensus sequence: AATHATATWTHAAA Reverse complement motif     Consensus sequence: TTTDAWATATHATT


Dataset #: 2
Motif ID: 19
Motif name: Motif 19
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.113636

Alignment:
TTCWTAGATTAWA
--ATTTWATGAAA

Original motif     Consensus sequence: TTCWTAGATTAWA Reverse complement motif     Consensus sequence: TWTAATCTAWGAA


Dataset #: 2
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.113636

Alignment:
AATTYDGAARTAWW
-ATTTWATGAAA--

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT


Dataset #: 2
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.113636

Alignment:
TWSTTTWAWTTTWT
---TTTCATWAAAT

Original motif     Consensus sequence: AWAAAWTWAAASWA Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT


Dataset #: 4
Motif ID: 41
Motif name: wwAAATAATAtw
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.123737

Alignment:
HDAAATAATADD
TTTCATWAAAT-

Original motif     Consensus sequence: HDAAATAATADD Reverse complement motif     Consensus sequence: DDTATTATTTDH


Dataset #: 2
Motif ID: 10
Motif name: Motif 10
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.55

Alignment:
-TTTCATAAWT
TTTCATWAAAT

Original motif     Consensus sequence: TTTCATAAWT Reverse complement motif     Consensus sequence: AWTTATGAAA


Dataset #: 2 Motif ID: 12 Motif name: Motif 12

Original motif     Consensus sequence: AAAACAAA Reverse complement motif     Consensus sequence: TTTGTTTT

Best Matches for Motif ID 12 (Highest to Lowest)

Dataset #: 2
Motif ID: 15
Motif name: Motif 15
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0625

Alignment:
ATMACAATAAAA
---AAAACAAA-

Original motif     Consensus sequence: ATMACAATAAAA Reverse complement motif     Consensus sequence: TTTTATTGTYAT


Dataset #: 2
Motif ID: 17
Motif name: Motif 17
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0625

Alignment:
AAAAATGAAT
-AAAACAAA-

Original motif     Consensus sequence: AAAAATGAAT Reverse complement motif     Consensus sequence: ATTCATTTTT


Dataset #: 2
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.078125

Alignment:
AAATTKTATTTAWT
--TTTGTTTT----

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT


Dataset #: 2
Motif ID: 16
Motif name: Motif 16
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.078125

Alignment:
ACAAWTRATTTTGA
----TTTGTTTT--

Original motif     Consensus sequence: ACAAWTRATTTTGA Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT


Dataset #: 2
Motif ID: 14
Motif name: Motif 14
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.078125

Alignment:
AWAAATAA
AAAACAAA

Original motif     Consensus sequence: AWAAATAA Reverse complement motif     Consensus sequence: TTATTTWT


Dataset #: 2
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0805288

Alignment:
AWAAAWTWAAASWA
--AAAACAAA----

Original motif     Consensus sequence: AWAAAWTWAAASWA Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT


Dataset #: 2
Motif ID: 18
Motif name: Motif 18
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.09375

Alignment:
TTAGWTWATAA
TTTGTTTT---

Original motif     Consensus sequence: TTAGWTWATAA Reverse complement motif     Consensus sequence: TTATWAWCTAA


Dataset #: 2
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.09375

Alignment:
AAATRWTAAAATCA
--AAAACAAA----

Original motif     Consensus sequence: AAATRWTAAAATCA Reverse complement motif     Consensus sequence: TGATTTTAWKATTT


Dataset #: 2
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.101562

Alignment:
WWTAKTTCDKAATT
-TTTGTTTT-----

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT


Dataset #: 2
Motif ID: 4
Motif name: Motif 4
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.103618

Alignment:
AAAAWTTRCWT
AAAACAAA---

Original motif     Consensus sequence: AAAAWTTRCWT Reverse complement motif     Consensus sequence: AWGKAAWTTTT


Dataset #: 2 Motif ID: 13 Motif name: Motif 13

Original motif     Consensus sequence: AAAGATTT Reverse complement motif     Consensus sequence: AAATCTTT

Best Matches for Motif ID 13 (Highest to Lowest)

Dataset #: 2
Motif ID: 20
Motif name: Motif 20
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0

Alignment:
TTMAAAGATTT
---AAAGATTT

Original motif     Consensus sequence: TTMAAAGATTT Reverse complement motif     Consensus sequence: AAATCTTTYAA


Dataset #: 2
Motif ID: 16
Motif name: Motif 16
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0625

Alignment:
ACAAWTRATTTTGA
---AAAGATTT---

Original motif     Consensus sequence: ACAAWTRATTTTGA Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT


Dataset #: 2
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 7
Number of overlap: 8
Similarity score: 0.0625

Alignment:
AAATRWTAAAATCA
------AAATCTTT

Original motif     Consensus sequence: AAATRWTAAAATCA Reverse complement motif     Consensus sequence: TGATTTTAWKATTT


Dataset #: 2
Motif ID: 19
Motif name: Motif 19
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.078125

Alignment:
TTCWTAGATTAWA
---AAAGATTT--

Original motif     Consensus sequence: TTCWTAGATTAWA Reverse complement motif     Consensus sequence: TWTAATCTAWGAA


Dataset #: 2
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 7
Number of overlap: 8
Similarity score: 0.078125

Alignment:
AAATTKTATTTAWT
AAATCTTT------

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT


Dataset #: 2
Motif ID: 4
Motif name: Motif 4
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0822369

Alignment:
AWGKAAWTTTT
---AAATCTTT

Original motif     Consensus sequence: AAAAWTTRCWT Reverse complement motif     Consensus sequence: AWGKAAWTTTT


Dataset #: 2
Motif ID: 17
Motif name: Motif 17
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.09375

Alignment:
AAAAATGAAT
AAAGATTT--

Original motif     Consensus sequence: AAAAATGAAT Reverse complement motif     Consensus sequence: ATTCATTTTT


Dataset #: 4
Motif ID: 44
Motif name: dhACATTCTkh
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.104167

Alignment:
HCAGAATGTHD
---AAATCTTT

Original motif     Consensus sequence: DHACATTCTGH Reverse complement motif     Consensus sequence: HCAGAATGTHD


Dataset #: 2
Motif ID: 14
Motif name: Motif 14
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.109375

Alignment:
AWAAATAA
AAAGATTT

Original motif     Consensus sequence: AWAAATAA Reverse complement motif     Consensus sequence: TTATTTWT


Dataset #: 4
Motif ID: 37
Motif name: tkAAATAATAtw
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.110417

Alignment:
HDAAATAATAHW
--AAATCTTT--

Original motif     Consensus sequence: HDAAATAATAHW Reverse complement motif     Consensus sequence: WHTATTATTTDH


Dataset #: 2 Motif ID: 14 Motif name: Motif 14

Original motif     Consensus sequence: AWAAATAA Reverse complement motif     Consensus sequence: TTATTTWT

Best Matches for Motif ID 14 (Highest to Lowest)

Dataset #: 2
Motif ID: 17
Motif name: Motif 17
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.046875

Alignment:
ATTCATTTTT
--TTATTTWT

Original motif     Consensus sequence: AAAAATGAAT Reverse complement motif     Consensus sequence: ATTCATTTTT


Dataset #: 2
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.046875

Alignment:
AAATTKTATTTAWT
-----TTATTTWT-

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT


Dataset #: 2
Motif ID: 15
Motif name: Motif 15
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0625

Alignment:
ATMACAATAAAA
--AWAAATAA--

Original motif     Consensus sequence: ATMACAATAAAA Reverse complement motif     Consensus sequence: TTTTATTGTYAT


Dataset #: 2
Motif ID: 16
Motif name: Motif 16
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0625

Alignment:
TCAAAATKAWTTGT
------TTATTTWT

Original motif     Consensus sequence: ACAAWTRATTTTGA Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT


Dataset #: 4
Motif ID: 41
Motif name: wwAAATAATAtw
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.0636574

Alignment:
DDTATTATTTDH
----TTATTTWT

Original motif     Consensus sequence: HDAAATAATADD Reverse complement motif     Consensus sequence: DDTATTATTTDH


Dataset #: 4
Motif ID: 37
Motif name: tkAAATAATAtw
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.0697917

Alignment:
WHTATTATTTDH
----TTATTTWT

Original motif     Consensus sequence: HDAAATAATAHW Reverse complement motif     Consensus sequence: WHTATTATTTDH


Dataset #: 2
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.078125

Alignment:
TGATTTTAWKATTT
TTATTTWT------

Original motif     Consensus sequence: AAATRWTAAAATCA Reverse complement motif     Consensus sequence: TGATTTTAWKATTT


Dataset #: 2
Motif ID: 18
Motif name: Motif 18
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.078125

Alignment:
TTAGWTWATAA
TTATTTWT---

Original motif     Consensus sequence: TTAGWTWATAA Reverse complement motif     Consensus sequence: TTATWAWCTAA


Dataset #: 2
Motif ID: 12
Motif name: Motif 12
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.078125

Alignment:
AAAACAAA
AWAAATAA

Original motif     Consensus sequence: AAAACAAA Reverse complement motif     Consensus sequence: TTTGTTTT


Dataset #: 4
Motif ID: 45
Motif name: wbgTAAATAww
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0825893

Alignment:
DBGTAAATAHD
--AWAAATAA-

Original motif     Consensus sequence: DBGTAAATAHD Reverse complement motif     Consensus sequence: DHTATTTACBD


Dataset #: 2 Motif ID: 15 Motif name: Motif 15

Original motif     Consensus sequence: ATMACAATAAAA Reverse complement motif     Consensus sequence: TTTTATTGTYAT

Best Matches for Motif ID 15 (Highest to Lowest)

Dataset #: 2
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 12
Similarity score: 0.104167

Alignment:
TGATTTTAWKATTT
TTTTATTGTYAT--

Original motif     Consensus sequence: AAATRWTAAAATCA Reverse complement motif     Consensus sequence: TGATTTTAWKATTT


Dataset #: 2
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 12
Similarity score: 0.114583

Alignment:
AWTAAATAYAATTT
-ATMACAATAAAA-

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT


Dataset #: 2
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.114583

Alignment:
AWAAAWTWAAASWA
ATMACAATAAAA--

Original motif     Consensus sequence: AWAAAWTWAAASWA Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT


Dataset #: 2
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.119792

Alignment:
AATTYDGAARTAWW
--ATMACAATAAAA

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT


Dataset #: 2
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 12
Similarity score: 0.121528

Alignment:
AATHATATWTHAAA
-ATMACAATAAAA-

Original motif     Consensus sequence: AATHATATWTHAAA Reverse complement motif     Consensus sequence: TTTDAWATATHATT


Dataset #: 2
Motif ID: 16
Motif name: Motif 16
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 11
Similarity score: 0.590909

Alignment:
-TCAAAATKAWTTGT
ATMACAATAAAA---

Original motif     Consensus sequence: ACAAWTRATTTTGA Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT


Dataset #: 2
Motif ID: 11
Motif name: Motif 11
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.602273

Alignment:
-ATTTWATGAAA
TTTTATTGTYAT

Original motif     Consensus sequence: ATTTWATGAAA Reverse complement motif     Consensus sequence: TTTCATWAAAT


Dataset #: 2
Motif ID: 19
Motif name: Motif 19
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 11
Similarity score: 0.613636

Alignment:
-TWTAATCTAWGAA
TTTTATTGTYAT--

Original motif     Consensus sequence: TTCWTAGATTAWA Reverse complement motif     Consensus sequence: TWTAATCTAWGAA


Dataset #: 2
Motif ID: 18
Motif name: Motif 18
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.613636

Alignment:
TTAGWTWATAA-
TTTTATTGTYAT

Original motif     Consensus sequence: TTAGWTWATAA Reverse complement motif     Consensus sequence: TTATWAWCTAA


Dataset #: 4
Motif ID: 37
Motif name: tkAAATAATAtw
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.613636

Alignment:
-WHTATTATTTDH
TTTTATTGTYAT-

Original motif     Consensus sequence: HDAAATAATAHW Reverse complement motif     Consensus sequence: WHTATTATTTDH


Dataset #: 2 Motif ID: 16 Motif name: Motif 16

Original motif     Consensus sequence: ACAAWTRATTTTGA Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT

Best Matches for Motif ID 16 (Highest to Lowest)

Dataset #: 2
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.1

Alignment:
AWTAAATAYAATTT
TCAAAATKAWTTGT

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT


Dataset #: 2
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 12
Similarity score: 1.08264

Alignment:
--AATHATATWTHAAA
ACAAWTRATTTTGA--

Original motif     Consensus sequence: AATHATATWTHAAA Reverse complement motif     Consensus sequence: TTTDAWATATHATT


Dataset #: 4
Motif ID: 37
Motif name: tkAAATAATAtw
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 1.08403

Alignment:
--WHTATTATTTDH
TCAAAATKAWTTGT

Original motif     Consensus sequence: HDAAATAATAHW Reverse complement motif     Consensus sequence: WHTATTATTTDH


Dataset #: 4
Motif ID: 41
Motif name: wwAAATAATAtw
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 1.08881

Alignment:
--DDTATTATTTDH
TCAAAATKAWTTGT

Original motif     Consensus sequence: HDAAATAATADD Reverse complement motif     Consensus sequence: DDTATTATTTDH


Dataset #: 2
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 12
Similarity score: 1.1

Alignment:
--AAATRWTAAAATCA
ACAAWTRATTTTGA--

Original motif     Consensus sequence: AAATRWTAAAATCA Reverse complement motif     Consensus sequence: TGATTTTAWKATTT


Dataset #: 2
Motif ID: 15
Motif name: Motif 15
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 1.56591

Alignment:
TTTTATTGTYAT---
-ACAAWTRATTTTGA

Original motif     Consensus sequence: ATMACAATAAAA Reverse complement motif     Consensus sequence: TTTTATTGTYAT


Dataset #: 2
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 11
Similarity score: 1.56875

Alignment:
---AATTYDGAARTAWW
TCAAAATKAWTTGT---

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT


Dataset #: 2
Motif ID: 4
Motif name: Motif 4
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 1.57667

Alignment:
AAAAWTTRCWT---
ACAAWTRATTTTGA

Original motif     Consensus sequence: AAAAWTTRCWT Reverse complement motif     Consensus sequence: AWGKAAWTTTT


Dataset #: 2
Motif ID: 20
Motif name: Motif 20
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 1.57727

Alignment:
TTMAAAGATTT---
ACAAWTRATTTTGA

Original motif     Consensus sequence: TTMAAAGATTT Reverse complement motif     Consensus sequence: AAATCTTTYAA


Dataset #: 4
Motif ID: 44
Motif name: dhACATTCTkh
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 1.57727

Alignment:
HCAGAATGTHD---
TCAAAATKAWTTGT

Original motif     Consensus sequence: DHACATTCTGH Reverse complement motif     Consensus sequence: HCAGAATGTHD


Dataset #: 2 Motif ID: 17 Motif name: Motif 17

Original motif     Consensus sequence: AAAAATGAAT Reverse complement motif     Consensus sequence: ATTCATTTTT

Best Matches for Motif ID 17 (Highest to Lowest)

Dataset #: 2
Motif ID: 16
Motif name: Motif 16
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.05

Alignment:
ACAAWTRATTTTGA
-ATTCATTTTT---

Original motif     Consensus sequence: ACAAWTRATTTTGA Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT


Dataset #: 2
Motif ID: 15
Motif name: Motif 15
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0875

Alignment:
ATMACAATAAAA
--AAAAATGAAT

Original motif     Consensus sequence: ATMACAATAAAA Reverse complement motif     Consensus sequence: TTTTATTGTYAT


Dataset #: 2
Motif ID: 10
Motif name: Motif 10
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0875

Alignment:
AWTTATGAAA
AAAAATGAAT

Original motif     Consensus sequence: TTTCATAAWT Reverse complement motif     Consensus sequence: AWTTATGAAA


Dataset #: 2
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.0875

Alignment:
AWTAAATAYAATTT
---AAAAATGAAT-

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT


Dataset #: 2
Motif ID: 4
Motif name: Motif 4
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.0947369

Alignment:
AWGKAAWTTTT
-ATTCATTTTT

Original motif     Consensus sequence: AAAAWTTRCWT Reverse complement motif     Consensus sequence: AWGKAAWTTTT


Dataset #: 4
Motif ID: 44
Motif name: dhACATTCTkh
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.1

Alignment:
DHACATTCTGH
ATTCATTTTT-

Original motif     Consensus sequence: DHACATTCTGH Reverse complement motif     Consensus sequence: HCAGAATGTHD


Dataset #: 2
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 10
Similarity score: 0.1

Alignment:
TGATTTTAWKATTT
---ATTCATTTTT-

Original motif     Consensus sequence: AAATRWTAAAATCA Reverse complement motif     Consensus sequence: TGATTTTAWKATTT


Dataset #: 2
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.104808

Alignment:
TWSTTTWAWTTTWT
----ATTCATTTTT

Original motif     Consensus sequence: AWAAAWTWAAASWA Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT


Dataset #: 2
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.10625

Alignment:
TTTDAWATATHATT
AAAAATGAAT----

Original motif     Consensus sequence: AATHATATWTHAAA Reverse complement motif     Consensus sequence: TTTDAWATATHATT


Dataset #: 2
Motif ID: 20
Motif name: Motif 20
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.1125

Alignment:
AAATCTTTYAA
-ATTCATTTTT

Original motif     Consensus sequence: TTMAAAGATTT Reverse complement motif     Consensus sequence: AAATCTTTYAA


Dataset #: 2 Motif ID: 18 Motif name: Motif 18

Original motif     Consensus sequence: TTAGWTWATAA Reverse complement motif     Consensus sequence: TTATWAWCTAA

Best Matches for Motif ID 18 (Highest to Lowest)

Dataset #: 2
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.09375

Alignment:
AATTYDGAARTAWW
-TTATWAWCTAA--

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT


Dataset #: 2
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.102273

Alignment:
AAATRWTAAAATCA
TTATWAWCTAA---

Original motif     Consensus sequence: AAATRWTAAAATCA Reverse complement motif     Consensus sequence: TGATTTTAWKATTT


Dataset #: 2
Motif ID: 11
Motif name: Motif 11
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.102273

Alignment:
TTTCATWAAAT
TTAGWTWATAA

Original motif     Consensus sequence: ATTTWATGAAA Reverse complement motif     Consensus sequence: TTTCATWAAAT


Dataset #: 4
Motif ID: 37
Motif name: tkAAATAATAtw
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.102273

Alignment:
WHTATTATTTDH
-TTATWAWCTAA

Original motif     Consensus sequence: HDAAATAATAHW Reverse complement motif     Consensus sequence: WHTATTATTTDH


Dataset #: 4
Motif ID: 41
Motif name: wwAAATAATAtw
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.104798

Alignment:
DDTATTATTTDH
-TTATWAWCTAA

Original motif     Consensus sequence: HDAAATAATADD Reverse complement motif     Consensus sequence: DDTATTATTTDH


Dataset #: 2
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.109848

Alignment:
TTTDAWATATHATT
-TTAGWTWATAA--

Original motif     Consensus sequence: AATHATATWTHAAA Reverse complement motif     Consensus sequence: TTTDAWATATHATT


Dataset #: 2
Motif ID: 19
Motif name: Motif 19
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.113636

Alignment:
TWTAATCTAWGAA
--TTAGWTWATAA

Original motif     Consensus sequence: TTCWTAGATTAWA Reverse complement motif     Consensus sequence: TWTAATCTAWGAA


Dataset #: 2
Motif ID: 15
Motif name: Motif 15
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.113636

Alignment:
ATMACAATAAAA
-TTAGWTWATAA

Original motif     Consensus sequence: ATMACAATAAAA Reverse complement motif     Consensus sequence: TTTTATTGTYAT


Dataset #: 2
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.113636

Alignment:
AAATTKTATTTAWT
--TTATWAWCTAA-

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT


Dataset #: 2
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 11
Similarity score: 0.118881

Alignment:
AWAAAWTWAAASWA
-TTAGWTWATAA--

Original motif     Consensus sequence: AWAAAWTWAAASWA Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT


Dataset #: 2 Motif ID: 19 Motif name: Motif 19

Original motif     Consensus sequence: TTCWTAGATTAWA Reverse complement motif     Consensus sequence: TWTAATCTAWGAA

Best Matches for Motif ID 19 (Highest to Lowest)

Dataset #: 2
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 13
Similarity score: 0.0641025

Alignment:
AATHATATWTHAAA
-TTCWTAGATTAWA

Original motif     Consensus sequence: AATHATATWTHAAA Reverse complement motif     Consensus sequence: TTTDAWATATHATT


Dataset #: 2
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 12
Similarity score: 0.5625

Alignment:
AATTYDGAARTAWW-
--TTCWTAGATTAWA

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT


Dataset #: 2
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 12
Similarity score: 0.5625

Alignment:
-TGATTTTAWKATTT
TWTAATCTAWGAA--

Original motif     Consensus sequence: AAATRWTAAAATCA Reverse complement motif     Consensus sequence: TGATTTTAWKATTT


Dataset #: 4
Motif ID: 37
Motif name: tkAAATAATAtw
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.577083

Alignment:
WHTATTATTTDH-
TWTAATCTAWGAA

Original motif     Consensus sequence: HDAAATAATAHW Reverse complement motif     Consensus sequence: WHTATTATTTDH


Dataset #: 4
Motif ID: 41
Motif name: wwAAATAATAtw
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.58179

Alignment:
DDTATTATTTDH-
TWTAATCTAWGAA

Original motif     Consensus sequence: HDAAATAATADD Reverse complement motif     Consensus sequence: DDTATTATTTDH


Dataset #: 2
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 12
Similarity score: 0.583333

Alignment:
AWTAAATAYAATTT-
--TTCWTAGATTAWA

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT


Dataset #: 2
Motif ID: 20
Motif name: Motif 20
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 1.02652

Alignment:
TTMAAAGATTT--
TTCWTAGATTAWA

Original motif     Consensus sequence: TTMAAAGATTT Reverse complement motif     Consensus sequence: AAATCTTTYAA


Dataset #: 2
Motif ID: 11
Motif name: Motif 11
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 1.07197

Alignment:
TTTCATWAAAT--
TWTAATCTAWGAA

Original motif     Consensus sequence: ATTTWATGAAA Reverse complement motif     Consensus sequence: TTTCATWAAAT


Dataset #: 2
Motif ID: 18
Motif name: Motif 18
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 1.07197

Alignment:
--TTATWAWCTAA
TTCWTAGATTAWA

Original motif     Consensus sequence: TTAGWTWATAA Reverse complement motif     Consensus sequence: TTATWAWCTAA


Dataset #: 2
Motif ID: 15
Motif name: Motif 15
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 1.07197

Alignment:
--ATMACAATAAAA
TTCWTAGATTAWA-

Original motif     Consensus sequence: ATMACAATAAAA Reverse complement motif     Consensus sequence: TTTTATTGTYAT


Dataset #: 2 Motif ID: 20 Motif name: Motif 20

Original motif     Consensus sequence: TTMAAAGATTT Reverse complement motif     Consensus sequence: AAATCTTTYAA

Best Matches for Motif ID 20 (Highest to Lowest)

Dataset #: 2
Motif ID: 19
Motif name: Motif 19
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 11
Similarity score: 0.0681818

Alignment:
TTCWTAGATTAWA
TTMAAAGATTT--

Original motif     Consensus sequence: TTCWTAGATTAWA Reverse complement motif     Consensus sequence: TWTAATCTAWGAA


Dataset #: 2
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 11
Similarity score: 0.0681818

Alignment:
AAATRWTAAAATCA
---AAATCTTTYAA

Original motif     Consensus sequence: AAATRWTAAAATCA Reverse complement motif     Consensus sequence: TGATTTTAWKATTT


Dataset #: 2
Motif ID: 16
Motif name: Motif 16
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.102273

Alignment:
ACAAWTRATTTTGA
-AAATCTTTYAA--

Original motif     Consensus sequence: ACAAWTRATTTTGA Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT


Dataset #: 2
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 11
Similarity score: 0.102273

Alignment:
AAATTKTATTTAWT
-AAATCTTTYAA--

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT


Dataset #: 2
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.106061

Alignment:
TTTDAWATATHATT
--TTMAAAGATTT-

Original motif     Consensus sequence: AATHATATWTHAAA Reverse complement motif     Consensus sequence: TTTDAWATATHATT


Dataset #: 2
Motif ID: 4
Motif name: Motif 4
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.110646

Alignment:
AWGKAAWTTTT
TTMAAAGATTT

Original motif     Consensus sequence: AAAAWTTRCWT Reverse complement motif     Consensus sequence: AWGKAAWTTTT


Dataset #: 4
Motif ID: 37
Motif name: tkAAATAATAtw
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.124242

Alignment:
WHTATTATTTDH
-AAATCTTTYAA

Original motif     Consensus sequence: HDAAATAATAHW Reverse complement motif     Consensus sequence: WHTATTATTTDH


Dataset #: 2
Motif ID: 15
Motif name: Motif 15
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.125

Alignment:
ATMACAATAAAA
-AAATCTTTYAA

Original motif     Consensus sequence: ATMACAATAAAA Reverse complement motif     Consensus sequence: TTTTATTGTYAT


Dataset #: 2
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 11
Similarity score: 0.125

Alignment:
WWTAKTTCDKAATT
-AAATCTTTYAA--

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT


Dataset #: 2
Motif ID: 11
Motif name: Motif 11
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.6

Alignment:
ATTTWATGAAA-
-AAATCTTTYAA

Original motif     Consensus sequence: ATTTWATGAAA Reverse complement motif     Consensus sequence: TTTCATWAAAT


Dataset #: 2 Motif ID: 21 Motif name: Motif 21

Original motif     Consensus sequence: ATAAAA Reverse complement motif     Consensus sequence: TTTTAT

Best Matches for Motif ID 21 (Highest to Lowest)

Dataset #: 2
Motif ID: 15
Motif name: Motif 15
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0

Alignment:
TTTTATTGTYAT
TTTTAT------

Original motif     Consensus sequence: ATMACAATAAAA Reverse complement motif     Consensus sequence: TTTTATTGTYAT


Dataset #: 2
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 6
Similarity score: 0.0208333

Alignment:
AAATTKTATTTAWT
---TTTTAT-----

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT


Dataset #: 2
Motif ID: 11
Motif name: Motif 11
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 5
Number of overlap: 6
Similarity score: 0.0208333

Alignment:
TTTCATWAAAT
-ATAAAA----

Original motif     Consensus sequence: ATTTWATGAAA Reverse complement motif     Consensus sequence: TTTCATWAAAT


Dataset #: 2
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 6
Similarity score: 0.0208333

Alignment:
TGATTTTAWKATTT
---TTTTAT-----

Original motif     Consensus sequence: AAATRWTAAAATCA Reverse complement motif     Consensus sequence: TGATTTTAWKATTT


Dataset #: 2
Motif ID: 10
Motif name: Motif 10
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 6
Similarity score: 0.0416667

Alignment:
TTTCATAAWT
----TTTTAT

Original motif     Consensus sequence: TTTCATAAWT Reverse complement motif     Consensus sequence: AWTTATGAAA


Dataset #: 2
Motif ID: 19
Motif name: Motif 19
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0.0625

Alignment:
TWTAATCTAWGAA
TTTTAT-------

Original motif     Consensus sequence: TTCWTAGATTAWA Reverse complement motif     Consensus sequence: TWTAATCTAWGAA


Dataset #: 2
Motif ID: 14
Motif name: Motif 14
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.0625

Alignment:
TTATTTWT
--TTTTAT

Original motif     Consensus sequence: AWAAATAA Reverse complement motif     Consensus sequence: TTATTTWT


Dataset #: 2
Motif ID: 20
Motif name: Motif 20
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.0625

Alignment:
AAATCTTTYAA
-----TTTTAT

Original motif     Consensus sequence: TTMAAAGATTT Reverse complement motif     Consensus sequence: AAATCTTTYAA


Dataset #: 4
Motif ID: 41
Motif name: wwAAATAATAtw
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 6
Similarity score: 0.0632716

Alignment:
DDTATTATTTDH
--TTTTAT----

Original motif     Consensus sequence: HDAAATAATADD Reverse complement motif     Consensus sequence: DDTATTATTTDH


Dataset #: 2
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 6
Similarity score: 0.0689103

Alignment:
TWSTTTWAWTTTWT
---TTTTAT-----

Original motif     Consensus sequence: AWAAAWTWAAASWA Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT


Dataset #: 3 Motif ID: 22 Motif name: Zfx

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB

Best Matches for Motif ID 22 (Highest to Lowest)

Dataset #: 5
Motif ID: 46
Motif name: Zfx
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0

Alignment:
BBVGCCBVGGCCTV
BBVGCCBVGGCCTV

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB


Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.089972

Alignment:
BCCGCCCCGCCCCBB
BBVGCCBVGGCCTV-

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB


Dataset #: 5
Motif ID: 55
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 14
Similarity score: 0.0996894

Alignment:
DGVBCABTGDWGCGKRRCSR
--BBVGCCBVGGCCTV----

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 14
Similarity score: 0.0996894

Alignment:
DGVBCABTGDWGCGKRRCSR
--BBVGCCBVGGCCTV----

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.104023

Alignment:
HVGCCCCGCCCCBB
VAGGCCBBGGCVBB

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD


Dataset #: 3
Motif ID: 30
Motif name: PLAG1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.118259

Alignment:
CCCCCTTGGGCCCC
BBVGCCBVGGCCTV

Original motif     Consensus sequence: GGGGCCCAAGGGGG Reverse complement motif     Consensus sequence: CCCCCTTGGGCCCC


Dataset #: 5
Motif ID: 54
Motif name: PLAG1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.118259

Alignment:
CCCCCTTGGGCCCC
BBVGCCBVGGCCTV

Original motif     Consensus sequence: GGGGCCCAAGGGGG Reverse complement motif     Consensus sequence: CCCCCTTGGGCCCC


Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.118483

Alignment:
MSGGGGCGGGGYSG
BBVGCCBVGGCCTV

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG


Dataset #: 5
Motif ID: 59
Motif name: GABPA
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 1.6145

Alignment:
CCGGAAGTGVV---
VAGGCCBBGGCVBB

Original motif     Consensus sequence: CCGGAAGTGVV Reverse complement motif     Consensus sequence: VVCACTTCCGG


Dataset #: 3
Motif ID: 35
Motif name: GABPA
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 1.6145

Alignment:
CCGGAAGTGVV---
VAGGCCBBGGCVBB

Original motif     Consensus sequence: CCGGAAGTGVV Reverse complement motif     Consensus sequence: VVCACTTCCGG


Dataset #: 3 Motif ID: 23 Motif name: Egr1

Original motif     Consensus sequence: HGCGTGGGCGK Reverse complement motif     Consensus sequence: YCGCCCACGCH

Best Matches for Motif ID 23 (Highest to Lowest)

Dataset #: 5
Motif ID: 47
Motif name: Egr1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0

Alignment:
HGCGTGGGCGK
HGCGTGGGCGK

Original motif     Consensus sequence: HGCGTGGGCGK Reverse complement motif     Consensus sequence: YCGCCCACGCH


Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 11
Similarity score: 0.107124

Alignment:
BCCGCCCCGCCCCBB
YCGCCCACGCH----

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB


Dataset #: 3
Motif ID: 22
Motif name: Zfx
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.110516

Alignment:
BBVGCCBVGGCCTV
--HGCGTGGGCGK-

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB


Dataset #: 5
Motif ID: 46
Motif name: Zfx
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.110516

Alignment:
BBVGCCBVGGCCTV
--HGCGTGGGCGK-

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB


Dataset #: 5
Motif ID: 55
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 6
Number of overlap: 11
Similarity score: 0.110606

Alignment:
DGVBCABTGDWGCGKRRCSR
----HGCGTGGGCGK-----

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 11
Similarity score: 0.110606

Alignment:
DGVBCABTGDWGCGKRRCSR
----HGCGTGGGCGK-----

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.111149

Alignment:
CSKCCCCGCCCCSY
-YCGCCCACGCH--

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG


Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.116531

Alignment:
HVGCCCCGCCCCBB
-YCGCCCACGCH--

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD


Dataset #: 3
Motif ID: 24
Motif name: SP1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.606429

Alignment:
GGGGGYGGGG-
HGCGTGGGCGK

Original motif     Consensus sequence: CCCCKCCCCC Reverse complement motif     Consensus sequence: GGGGGYGGGG


Dataset #: 5
Motif ID: 48
Motif name: SP1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.606429

Alignment:
GGGGGYGGGG-
HGCGTGGGCGK

Original motif     Consensus sequence: CCCCKCCCCC Reverse complement motif     Consensus sequence: GGGGGYGGGG


Dataset #: 3 Motif ID: 24 Motif name: SP1

Original motif     Consensus sequence: CCCCKCCCCC Reverse complement motif     Consensus sequence: GGGGGYGGGG

Best Matches for Motif ID 24 (Highest to Lowest)

Dataset #: 5
Motif ID: 48
Motif name: SP1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0

Alignment:
CCCCKCCCCC
CCCCKCCCCC

Original motif     Consensus sequence: CCCCKCCCCC Reverse complement motif     Consensus sequence: GGGGGYGGGG


Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 10
Similarity score: 0.043504

Alignment:
CSKCCCCGCCCCSY
---CCCCKCCCCC-

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG


Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 10
Similarity score: 0.0486461

Alignment:
HVGCCCCGCCCCBB
---CCCCKCCCCC-

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD


Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.0517173

Alignment:
BCCGCCCCGCCCCBB
----CCCCKCCCCC-

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB


Dataset #: 3
Motif ID: 22
Motif name: Zfx
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 10
Similarity score: 0.0930706

Alignment:
BBVGCCBVGGCCTV
----GGGGGYGGGG

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB


Dataset #: 5
Motif ID: 46
Motif name: Zfx
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0930706

Alignment:
VAGGCCBBGGCVBB
----CCCCKCCCCC

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB


Dataset #: 5
Motif ID: 54
Motif name: PLAG1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.0990873

Alignment:
CCCCCTTGGGCCCC
-CCCCKCCCCC---

Original motif     Consensus sequence: GGGGCCCAAGGGGG Reverse complement motif     Consensus sequence: CCCCCTTGGGCCCC


Dataset #: 3
Motif ID: 30
Motif name: PLAG1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.0990873

Alignment:
CCCCCTTGGGCCCC
-CCCCKCCCCC---

Original motif     Consensus sequence: GGGGCCCAAGGGGG Reverse complement motif     Consensus sequence: CCCCCTTGGGCCCC


Dataset #: 5
Motif ID: 51
Motif name: Klf4
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.102706

Alignment:
GCCYCMCCCD
CCCCKCCCCC

Original motif     Consensus sequence: DGGGYGKGGC Reverse complement motif     Consensus sequence: GCCYCMCCCD


Dataset #: 3
Motif ID: 27
Motif name: Klf4
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.102706

Alignment:
GCCYCMCCCD
CCCCKCCCCC

Original motif     Consensus sequence: DGGGYGKGGC Reverse complement motif     Consensus sequence: GCCYCMCCCD


Dataset #: 3 Motif ID: 25 Motif name: TFAP2A

Original motif     Consensus sequence: GCCBBVRGS Reverse complement motif     Consensus sequence: SCMVBBGGC

Best Matches for Motif ID 25 (Highest to Lowest)

Dataset #: 5
Motif ID: 49
Motif name: TFAP2A
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 9
Similarity score: 0

Alignment:
GCCBBVRGS
GCCBBVRGS

Original motif     Consensus sequence: GCCBBVRGS Reverse complement motif     Consensus sequence: SCMVBBGGC


Dataset #: 3
Motif ID: 22
Motif name: Zfx
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 9
Similarity score: 0.0516959

Alignment:
BBVGCCBVGGCCTV
---SCMVBBGGC--

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB


Dataset #: 5
Motif ID: 46
Motif name: Zfx
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 9
Similarity score: 0.0516959

Alignment:
VAGGCCBBGGCVBB
---GCCBBVRGS--

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB


Dataset #: 5
Motif ID: 54
Motif name: PLAG1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 9
Similarity score: 0.08003

Alignment:
GGGGCCCAAGGGGG
---GCCBBVRGS--

Original motif     Consensus sequence: GGGGCCCAAGGGGG Reverse complement motif     Consensus sequence: CCCCCTTGGGCCCC


Dataset #: 3
Motif ID: 30
Motif name: PLAG1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 9
Similarity score: 0.08003

Alignment:
GGGGCCCAAGGGGG
---GCCBBVRGS--

Original motif     Consensus sequence: GGGGCCCAAGGGGG Reverse complement motif     Consensus sequence: CCCCCTTGGGCCCC


Dataset #: 5
Motif ID: 57
Motif name: Mycn
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 9
Similarity score: 0.0936515

Alignment:
HSCACGTGGC
-SCMVBBGGC

Original motif     Consensus sequence: HSCACGTGGC Reverse complement motif     Consensus sequence: GCCACGTGSD


Dataset #: 3
Motif ID: 33
Motif name: Mycn
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 9
Similarity score: 0.0936515

Alignment:
HSCACGTGGC
-SCMVBBGGC

Original motif     Consensus sequence: HSCACGTGGC Reverse complement motif     Consensus sequence: GCCACGTGSD


Dataset #: 5
Motif ID: 55
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 8
Number of overlap: 9
Similarity score: 0.0966967

Alignment:
MSGKKRCGCWDCABTGBBCD
-------GCCBBVRGS----

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 8
Number of overlap: 9
Similarity score: 0.0966967

Alignment:
MSGKKRCGCWDCABTGBBCD
-------GCCBBVRGS----

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 5
Motif ID: 58
Motif name: Myc
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 9
Similarity score: 0.0999167

Alignment:
VGCACGTGGH
-SCMVBBGGC

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV


Dataset #: 3 Motif ID: 26 Motif name: MIZF

Original motif     Consensus sequence: BAACGTCCGC Reverse complement motif     Consensus sequence: GCGGACGTTV

Best Matches for Motif ID 26 (Highest to Lowest)

Dataset #: 5
Motif ID: 50
Motif name: MIZF
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0

Alignment:
BAACGTCCGC
BAACGTCCGC

Original motif     Consensus sequence: BAACGTCCGC Reverse complement motif     Consensus sequence: GCGGACGTTV


Dataset #: 5
Motif ID: 59
Motif name: GABPA
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.0810799

Alignment:
CCGGAAGTGVV
GCGGACGTTV-

Original motif     Consensus sequence: CCGGAAGTGVV Reverse complement motif     Consensus sequence: VVCACTTCCGG


Dataset #: 3
Motif ID: 35
Motif name: GABPA
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.0810799

Alignment:
CCGGAAGTGVV
GCGGACGTTV-

Original motif     Consensus sequence: CCGGAAGTGVV Reverse complement motif     Consensus sequence: VVCACTTCCGG


Dataset #: 4
Motif ID: 40
Motif name: kcACCTGCAgc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.112981

Alignment:
BCACCTGCABC
BAACGTCCGC-

Original motif     Consensus sequence: BCACCTGCABC Reverse complement motif     Consensus sequence: GBTGCAGGTGB


Dataset #: 4
Motif ID: 44
Motif name: dhACATTCTkh
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.114583

Alignment:
DHACATTCTGH
BAACGTCCGC-

Original motif     Consensus sequence: DHACATTCTGH Reverse complement motif     Consensus sequence: HCAGAATGTHD


Dataset #: 4
Motif ID: 42
Motif name: sSGTCACGTGACSs
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 10
Similarity score: 0.115556

Alignment:
SGGTCACGTGACCS
-GCGGACGTTV---

Original motif     Consensus sequence: SGGTCACGTGACCS Reverse complement motif     Consensus sequence: SGGTCACGTGACCS


Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.122872

Alignment:
BCCGCCCCGCCCCBB
BAACGTCCGC-----

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB


Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 10
Number of overlap: 10
Similarity score: 0.122917

Alignment:
MSGKKRCGCWDCABTGBBCD
-GCGGACGTTV---------

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 5
Motif ID: 55
Motif name: Pax5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.122917

Alignment:
MSGKKRCGCWDCABTGBBCD
-GCGGACGTTV---------

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 10
Similarity score: 0.123601

Alignment:
HVGCCCCGCCCCBB
---BAACGTCCGC-

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD


Dataset #: 3 Motif ID: 27 Motif name: Klf4

Original motif     Consensus sequence: DGGGYGKGGC Reverse complement motif     Consensus sequence: GCCYCMCCCD

Best Matches for Motif ID 27 (Highest to Lowest)

Dataset #: 5
Motif ID: 51
Motif name: Klf4
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0

Alignment:
DGGGYGKGGC
DGGGYGKGGC

Original motif     Consensus sequence: DGGGYGKGGC Reverse complement motif     Consensus sequence: GCCYCMCCCD


Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 10
Similarity score: 0.0516385

Alignment:
CSKCCCCGCCCCSY
--GCCYCMCCCD--

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG


Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 10
Similarity score: 0.0524114

Alignment:
BBGGGGCGGGGCVD
--DGGGYGKGGC--

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD


Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 10
Similarity score: 0.0558821

Alignment:
BBGGGGCGGGGCGGB
--DGGGYGKGGC---

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB


Dataset #: 5
Motif ID: 46
Motif name: Zfx
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 10
Similarity score: 0.0987519

Alignment:
VAGGCCBBGGCVBB
-DGGGYGKGGC---

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB


Dataset #: 3
Motif ID: 22
Motif name: Zfx
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 10
Similarity score: 0.0987519

Alignment:
BBVGCCBVGGCCTV
-GCCYCMCCCD---

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB


Dataset #: 3
Motif ID: 24
Motif name: SP1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.102706

Alignment:
GGGGGYGGGG
DGGGYGKGGC

Original motif     Consensus sequence: CCCCKCCCCC Reverse complement motif     Consensus sequence: GGGGGYGGGG


Dataset #: 5
Motif ID: 48
Motif name: SP1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.102706

Alignment:
CCCCKCCCCC
GCCYCMCCCD

Original motif     Consensus sequence: CCCCKCCCCC Reverse complement motif     Consensus sequence: GGGGGYGGGG


Dataset #: 3
Motif ID: 34
Motif name: Myc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.105078

Alignment:
VGCACGTGGH
DGGGYGKGGC

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV


Dataset #: 5
Motif ID: 58
Motif name: Myc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.105078

Alignment:
VGCACGTGGH
DGGGYGKGGC

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV


Dataset #: 3 Motif ID: 28 Motif name: E2F1

Original motif     Consensus sequence: TTTSGCGC Reverse complement motif     Consensus sequence: GCGCSAAA

Best Matches for Motif ID 28 (Highest to Lowest)

Dataset #: 5
Motif ID: 52
Motif name: E2F1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0

Alignment:
TTTSGCGC
TTTSGCGC

Original motif     Consensus sequence: TTTSGCGC Reverse complement motif     Consensus sequence: GCGCSAAA


Dataset #: 3
Motif ID: 30
Motif name: PLAG1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0982639

Alignment:
GGGGCCCAAGGGGG
-GCGCSAAA-----

Original motif     Consensus sequence: GGGGCCCAAGGGGG Reverse complement motif     Consensus sequence: CCCCCTTGGGCCCC


Dataset #: 5
Motif ID: 54
Motif name: PLAG1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0982639

Alignment:
GGGGCCCAAGGGGG
-GCGCSAAA-----

Original motif     Consensus sequence: GGGGCCCAAGGGGG Reverse complement motif     Consensus sequence: CCCCCTTGGGCCCC


Dataset #: 4
Motif ID: 39
Motif name: kCAGCCAATmr
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.10386

Alignment:
DCAGCCAATVR
-GCGCSAAA--

Original motif     Consensus sequence: DCAGCCAATVR Reverse complement motif     Consensus sequence: MBATTGGCTGH


Dataset #: 5
Motif ID: 47
Motif name: Egr1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.119792

Alignment:
YCGCCCACGCH
GCGCSAAA---

Original motif     Consensus sequence: HGCGTGGGCGK Reverse complement motif     Consensus sequence: YCGCCCACGCH


Dataset #: 3
Motif ID: 23
Motif name: Egr1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.119792

Alignment:
YCGCCCACGCH
GCGCSAAA---

Original motif     Consensus sequence: HGCGTGGGCGK Reverse complement motif     Consensus sequence: YCGCCCACGCH


Dataset #: 2
Motif ID: 15
Motif name: Motif 15
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.125

Alignment:
ATMACAATAAAA
-GCGCSAAA---

Original motif     Consensus sequence: ATMACAATAAAA Reverse complement motif     Consensus sequence: TTTTATTGTYAT


Dataset #: 2
Motif ID: 11
Motif name: Motif 11
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.125

Alignment:
ATTTWATGAAA
-TTTSGCGC--

Original motif     Consensus sequence: ATTTWATGAAA Reverse complement motif     Consensus sequence: TTTCATWAAAT


Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 9
Number of overlap: 7
Similarity score: 0.612386

Alignment:
-BBGGGGCGGGGCGGB
TTTSGCGC--------

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB


Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 8
Number of overlap: 7
Similarity score: 0.616684

Alignment:
-BBGGGGCGGGGCVD
TTTSGCGC-------

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD


Dataset #: 3 Motif ID: 29 Motif name: HIF1AARNT

Original motif     Consensus sequence: VBACGTGV Reverse complement motif     Consensus sequence: VCACGTBV

Best Matches for Motif ID 29 (Highest to Lowest)

Dataset #: 5
Motif ID: 53
Motif name: HIF1AARNT
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0

Alignment:
VBACGTGV
VBACGTGV

Original motif     Consensus sequence: VBACGTGV Reverse complement motif     Consensus sequence: VCACGTBV


Dataset #: 5
Motif ID: 57
Motif name: Mycn
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0575825

Alignment:
GCCACGTGSD
-VBACGTGV-

Original motif     Consensus sequence: HSCACGTGGC Reverse complement motif     Consensus sequence: GCCACGTGSD


Dataset #: 3
Motif ID: 33
Motif name: Mycn
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0575825

Alignment:
GCCACGTGSD
-VBACGTGV-

Original motif     Consensus sequence: HSCACGTGGC Reverse complement motif     Consensus sequence: GCCACGTGSD


Dataset #: 5
Motif ID: 58
Motif name: Myc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0597215

Alignment:
DCCACGTGCV
-VBACGTGV-

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV


Dataset #: 3
Motif ID: 34
Motif name: Myc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0597215

Alignment:
DCCACGTGCV
-VBACGTGV-

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV


Dataset #: 4
Motif ID: 40
Motif name: kcACCTGCAgc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0748197

Alignment:
BCACCTGCABC
VBACGTGV---

Original motif     Consensus sequence: BCACCTGCABC Reverse complement motif     Consensus sequence: GBTGCAGGTGB


Dataset #: 4
Motif ID: 42
Motif name: sSGTCACGTGACSs
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0767561

Alignment:
SGGTCACGTGACCS
---VCACGTBV---

Original motif     Consensus sequence: SGGTCACGTGACCS Reverse complement motif     Consensus sequence: SGGTCACGTGACCS


Dataset #: 5
Motif ID: 50
Motif name: MIZF
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0829928

Alignment:
GCGGACGTTV
--VCACGTBV

Original motif     Consensus sequence: BAACGTCCGC Reverse complement motif     Consensus sequence: GCGGACGTTV


Dataset #: 3
Motif ID: 26
Motif name: MIZF
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0829928

Alignment:
GCGGACGTTV
--VCACGTBV

Original motif     Consensus sequence: BAACGTCCGC Reverse complement motif     Consensus sequence: GCGGACGTTV


Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 8
Number of overlap: 8
Similarity score: 0.100962

Alignment:
MSGKKRCGCWDCABTGBBCD
-----VCACGTBV-------

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 3 Motif ID: 30 Motif name: PLAG1

Original motif     Consensus sequence: GGGGCCCAAGGGGG Reverse complement motif     Consensus sequence: CCCCCTTGGGCCCC

Best Matches for Motif ID 30 (Highest to Lowest)

Dataset #: 5
Motif ID: 54
Motif name: PLAG1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0

Alignment:
GGGGCCCAAGGGGG
GGGGCCCAAGGGGG

Original motif     Consensus sequence: GGGGCCCAAGGGGG Reverse complement motif     Consensus sequence: CCCCCTTGGGCCCC


Dataset #: 3
Motif ID: 22
Motif name: Zfx
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.118259

Alignment:
VAGGCCBBGGCVBB
GGGGCCCAAGGGGG

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB


Dataset #: 5
Motif ID: 46
Motif name: Zfx
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.118259

Alignment:
BBVGCCBVGGCCTV
CCCCCTTGGGCCCC

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB


Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 14
Similarity score: 0.120124

Alignment:
BCCGCCCCGCCCCBB
CCCCCTTGGGCCCC-

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB


Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.124008

Alignment:
DGVBCABTGDWGCGKRRCSR
GGGGCCCAAGGGGG------

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 5
Motif ID: 55
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.124008

Alignment:
DGVBCABTGDWGCGKRRCSR
GGGGCCCAAGGGGG------

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 13
Similarity score: 0.617683

Alignment:
-MSGGGGCGGGGYSG
GGGGCCCAAGGGGG-

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG


Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 13
Similarity score: 0.624856

Alignment:
-HVGCCCCGCCCCBB
CCCCCTTGGGCCCC-

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD


Dataset #: 5
Motif ID: 48
Motif name: SP1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 2.1077

Alignment:
----CCCCKCCCCC
CCCCCTTGGGCCCC

Original motif     Consensus sequence: CCCCKCCCCC Reverse complement motif     Consensus sequence: GGGGGYGGGG


Dataset #: 3
Motif ID: 24
Motif name: SP1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 2.1077

Alignment:
----GGGGGYGGGG
GGGGCCCAAGGGGG

Original motif     Consensus sequence: CCCCKCCCCC Reverse complement motif     Consensus sequence: GGGGGYGGGG


Dataset #: 3 Motif ID: 31 Motif name: Pax5

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD

Best Matches for Motif ID 31 (Highest to Lowest)

Dataset #: 5
Motif ID: 55
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0

Alignment:
DGVBCABTGDWGCGKRRCSR
DGVBCABTGDWGCGKRRCSR

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 15
Similarity score: 2.61478

Alignment:
BBGGGGCGGGGCGGB-----
MSGKKRCGCWDCABTGBBCD

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB


Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 3.09024

Alignment:
------BBGGGGCGGGGCVD
DGVBCABTGDWGCGKRRCSR

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD


Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 3.09355

Alignment:
------CSKCCCCGCCCCSY
MSGKKRCGCWDCABTGBBCD

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG


Dataset #: 2
Motif ID: 2
Motif name: Motif 2
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: