**************************************************************************************************************************************************************************************************** MOTIFSIM - Motif Similarity Detection Tool Version 2.2 **************************************************************************************************************************************************************************************************** INPUT **************************************************************************************************************************************************************************************************** Input Parameters Number of files: 5 Number of top significant motifs: 10 Number of best matches: 10 Similarity cutoff: >= 0.75 Matching motif database: UniProbe Mus Musculus Motif tree: Yes Combined similar motifs: Yes Output file type: All Output file format: All Input files and motif counts File name Count of motifs Dataset # DREME_DM230.txt 1 1 MEME_DM230.txt 20 2 PScanChIP_DM230.txt 14 3 RSAT_peak-motifs_DM230.txt 10 4 PScanChIP_DM230.txt 14 5 **************************************************************************************************************************************************************************************************** RESULTS **************************************************************************************************************************************************************************************************** ****************************************************************** Top 10 Significant Motifs - Global Matching (Highest to Lowest) ****************************************************************** Dataset #: 4 Motif ID: 45 Motif name: wbgTAAATAww Consensus sequence (original motif): DBGTAAATAHD Consensus sequence (reverse complement motif): DHTATTTACBD *************************************************************** Best Matches for Top Significant Motif ID 45 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 9 Motif 9 Reverse Complement Original Motif Backward 4 11 0.0177412 Consensus sequence (original motif): AATHATATWTHAAA Consensus sequence (reverse complement motif): TTTDAWATATHATT Alignment: AATHATATWTHAAA DHTATTTACBD--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 6 Motif 6 Original Motif Original Motif Backward 1 11 0.0205821 Consensus sequence (original motif): AATTYDGAARTAWW Consensus sequence (reverse complement motif): WWTAKTTCDKAATT Alignment: AATTYDGAARTAWW ---DBGTAAATAHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 4 Motif 4 Original Motif Reverse Complement Backward 1 11 0.0288058 Consensus sequence (original motif): AAAAWTTRCWT Consensus sequence (reverse complement motif): AWGKAAWTTTT Alignment: AWGKAAWTTTT DBGTAAATAHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 3 Motif 3 Reverse Complement Original Motif Backward 2 11 0.0337252 Consensus sequence (original motif): AWAAAWTWAAASWA Consensus sequence (reverse complement motif): TWSTTTWAWTTTWT Alignment: AWAAAWTWAAASWA --DHTATTTACBD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 5 Motif 5 Reverse Complement Original Motif Backward 1 11 0.0404685 Consensus sequence (original motif): AWTAAATAYAATTT Consensus sequence (reverse complement motif): AAATTKTATTTAWT Alignment: AWTAAATAYAATTT ---DHTATTTACBD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 55 Pax5 Original Motif Original Motif Backward 10 11 0.0439858 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR DBGTAAATAHD--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 31 Pax5 Original Motif Original Motif Forward 1 11 0.0439858 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR DBGTAAATAHD--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 59 GABPA Original Motif Original Motif Backward 1 11 0.0439962 Consensus sequence (original motif): CCGGAAGTGVV Consensus sequence (reverse complement motif): VVCACTTCCGG Alignment: CCGGAAGTGVV DBGTAAATAHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 GABPA Original Motif Original Motif Backward 1 11 0.0439962 Consensus sequence (original motif): CCGGAAGTGVV Consensus sequence (reverse complement motif): VVCACTTCCGG Alignment: CCGGAAGTGVV DBGTAAATAHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 Motif 19 Reverse Complement Reverse Complement Backward 2 11 0.0477737 Consensus sequence (original motif): TTCWTAGATTAWA Consensus sequence (reverse complement motif): TWTAATCTAWGAA Alignment: TWTAATCTAWGAA -DHTATTTACBD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 1 Motif name: Motif 1 Consensus sequence (original motif): GGCGGGGC Consensus sequence (reverse complement motif): GCCCCGCC *************************************************************** Best Matches for Top Significant Motif ID 1 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 36 csGCCCCGCCCCsc Reverse Complement Original Motif Backward 5 8 0 Consensus sequence (original motif): HVGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCVD Alignment: HVGCCCCGCCCCBB --GCCCCGCC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 38 cccGCCCCGCCCCsb Reverse Complement Original Motif Backward 5 8 0.00250079 Consensus sequence (original motif): BCCGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCGGB Alignment: BCCGCCCCGCCCCBB ---GCCCCGCC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 7 Motif 7 Original Motif Reverse Complement Forward 5 8 0.0149958 Consensus sequence (original motif): CSKCCCCGCCCCSY Consensus sequence (reverse complement motif): MSGGGGCGGGGYSG Alignment: MSGGGGCGGGGYSG ----GGCGGGGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 51 Klf4 Original Motif Original Motif Forward 3 8 0.0349983 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: DGGGYGKGGC --GGCGGGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 27 Klf4 Original Motif Original Motif Forward 3 8 0.0349983 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: DGGGYGKGGC --GGCGGGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 22 Zfx Reverse Complement Reverse Complement Forward 4 8 0.0708224 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: VAGGCCBBGGCVBB ---GCCCCGCC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 46 Zfx Reverse Complement Reverse Complement Forward 4 8 0.0708224 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: VAGGCCBBGGCVBB ---GCCCCGCC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 55 Pax5 Original Motif Original Motif Backward 3 8 0.0853847 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR ----------GGCGGGGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 31 Pax5 Original Motif Original Motif Backward 3 8 0.0853847 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR ----------GGCGGGGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 23 Egr1 Original Motif Original Motif Backward 4 8 0.0878731 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: HGCGTGGGCGK GGCGGGGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 47 Egr1 Original Motif Original Motif Backward 4 8 0.0878731 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: HGCGTGGGCGK GGCGGGGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 32 Motif name: ArntAhr Consensus sequence (original motif): YGCGTG Consensus sequence (reverse complement motif): CACGCM *************************************************************** Best Matches for Top Significant Motif ID 32 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 56 ArntAhr Original Motif Original Motif Forward 1 6 0 Consensus sequence (original motif): YGCGTG Consensus sequence (reverse complement motif): CACGCM Alignment: YGCGTG YGCGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 47 Egr1 Original Motif Original Motif Forward 1 6 0.0340278 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: HGCGTGGGCGK YGCGTG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 53 HIF1AARNT Original Motif Original Motif Backward 2 6 0.0452724 Consensus sequence (original motif): VBACGTGV Consensus sequence (reverse complement motif): VCACGTBV Alignment: VBACGTGV -YGCGTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 57 Mycn Original Motif Reverse Complement Forward 3 6 0.0718227 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: GCCACGTGSD --YGCGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 36 csGCCCCGCCCCsc Reverse Complement Original Motif Backward 5 6 0.0736681 Consensus sequence (original motif): HVGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCVD Alignment: HVGCCCCGCCCCBB ----CACGCM---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 58 Myc Original Motif Reverse Complement Backward 3 6 0.0739492 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: DCCACGTGCV --YGCGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 1 Motif 1 Reverse Complement Reverse Complement Forward 3 6 0.0746528 Consensus sequence (original motif): GGCGGGGC Consensus sequence (reverse complement motif): GCCCCGCC Alignment: GCCCCGCC --CACGCM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 42 sSGTCACGTGACSs Original Motif Original Motif Backward 5 6 0.0752315 Consensus sequence (original motif): SGGTCACGTGACCS Consensus sequence (reverse complement motif): SGGTCACGTGACCS Alignment: SGGTCACGTGACCS ----YGCGTG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 38 cccGCCCCGCCCCsb Reverse Complement Original Motif Forward 6 6 0.0765366 Consensus sequence (original motif): BCCGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCGGB Alignment: BCCGCCCCGCCCCBB -----CACGCM---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 7 Motif 7 Original Motif Reverse Complement Forward 5 6 0.0806145 Consensus sequence (original motif): CSKCCCCGCCCCSY Consensus sequence (reverse complement motif): MSGGGGCGGGGYSG Alignment: MSGGGGCGGGGYSG ----YGCGTG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 56 Motif name: ArntAhr Consensus sequence (original motif): YGCGTG Consensus sequence (reverse complement motif): CACGCM *************************************************************** Best Matches for Top Significant Motif ID 56 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 32 ArntAhr Original Motif Original Motif Forward 1 6 0 Consensus sequence (original motif): YGCGTG Consensus sequence (reverse complement motif): CACGCM Alignment: YGCGTG YGCGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 23 Egr1 Reverse Complement Reverse Complement Backward 1 6 0.0340278 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: YCGCCCACGCH -----CACGCM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 29 HIF1AARNT Original Motif Original Motif Backward 2 6 0.0452724 Consensus sequence (original motif): VBACGTGV Consensus sequence (reverse complement motif): VCACGTBV Alignment: VBACGTGV -YGCGTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 33 Mycn Reverse Complement Original Motif Forward 3 6 0.0718227 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: HSCACGTGGC --CACGCM-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 36 csGCCCCGCCCCsc Original Motif Reverse Complement Forward 5 6 0.0736681 Consensus sequence (original motif): HVGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCVD Alignment: BBGGGGCGGGGCVD ----YGCGTG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 Myc Reverse Complement Original Motif Forward 3 6 0.0739492 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: VGCACGTGGH --CACGCM-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 1 Motif 1 Reverse Complement Reverse Complement Forward 3 6 0.0746528 Consensus sequence (original motif): GGCGGGGC Consensus sequence (reverse complement motif): GCCCCGCC Alignment: GCCCCGCC --CACGCM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 42 sSGTCACGTGACSs Original Motif Original Motif Backward 5 6 0.0752315 Consensus sequence (original motif): SGGTCACGTGACCS Consensus sequence (reverse complement motif): SGGTCACGTGACCS Alignment: SGGTCACGTGACCS ----YGCGTG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 38 cccGCCCCGCCCCsb Original Motif Reverse Complement Forward 6 6 0.0765366 Consensus sequence (original motif): BCCGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCGGB Alignment: BBGGGGCGGGGCGGB -----YGCGTG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 7 Motif 7 Original Motif Reverse Complement Forward 5 6 0.0806145 Consensus sequence (original motif): CSKCCCCGCCCCSY Consensus sequence (reverse complement motif): MSGGGGCGGGGYSG Alignment: MSGGGGCGGGGYSG ----YGCGTG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 24 Motif name: SP1 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG *************************************************************** Best Matches for Top Significant Motif ID 24 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 48 SP1 Original Motif Original Motif Backward 1 10 0 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: CCCCKCCCCC CCCCKCCCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 7 Motif 7 Original Motif Original Motif Forward 4 10 0.043504 Consensus sequence (original motif): CSKCCCCGCCCCSY Consensus sequence (reverse complement motif): MSGGGGCGGGGYSG Alignment: CSKCCCCGCCCCSY ---CCCCKCCCCC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 36 csGCCCCGCCCCsc Reverse Complement Reverse Complement Backward 4 10 0.0486461 Consensus sequence (original motif): HVGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCVD Alignment: BBGGGGCGGGGCVD -GGGGGYGGGG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 38 cccGCCCCGCCCCsb Original Motif Original Motif Backward 2 10 0.0517173 Consensus sequence (original motif): BCCGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCGGB Alignment: BCCGCCCCGCCCCBB ----CCCCKCCCCC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 46 Zfx Original Motif Reverse Complement Backward 1 10 0.0930706 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: VAGGCCBBGGCVBB ----CCCCKCCCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 54 PLAG1 Original Motif Reverse Complement Forward 2 10 0.0990873 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: CCCCCTTGGGCCCC -CCCCKCCCCC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 51 Klf4 Original Motif Reverse Complement Backward 1 10 0.102706 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: GCCYCMCCCD CCCCKCCCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 2 Motif 2 Original Motif Reverse Complement Backward 1 10 0.103809 Consensus sequence (original motif): RGRAGARRGARRAR Consensus sequence (reverse complement motif): MTMMTCMMTCTKCK Alignment: MTMMTCMMTCTKCK ----CCCCKCCCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 47 Egr1 Reverse Complement Original Motif Forward 1 10 0.106429 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: HGCGTGGGCGK GGGGGYGGGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 55 Pax5 Reverse Complement Original Motif Forward 8 10 0.11125 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR -------GGGGGYGGGG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 48 Motif name: SP1 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG *************************************************************** Best Matches for Top Significant Motif ID 48 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 24 SP1 Original Motif Original Motif Forward 1 10 0 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: CCCCKCCCCC CCCCKCCCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 7 Motif 7 Original Motif Original Motif Forward 4 10 0.043504 Consensus sequence (original motif): CSKCCCCGCCCCSY Consensus sequence (reverse complement motif): MSGGGGCGGGGYSG Alignment: CSKCCCCGCCCCSY ---CCCCKCCCCC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 36 csGCCCCGCCCCsc Reverse Complement Reverse Complement Backward 4 10 0.0486461 Consensus sequence (original motif): HVGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCVD Alignment: BBGGGGCGGGGCVD -GGGGGYGGGG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 38 cccGCCCCGCCCCsb Original Motif Original Motif Backward 2 10 0.0517173 Consensus sequence (original motif): BCCGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCGGB Alignment: BCCGCCCCGCCCCBB ----CCCCKCCCCC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 22 Zfx Reverse Complement Original Motif Backward 1 10 0.0930706 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV ----GGGGGYGGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 30 PLAG1 Reverse Complement Original Motif Forward 2 10 0.0990873 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: GGGGCCCAAGGGGG -GGGGGYGGGG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 27 Klf4 Reverse Complement Original Motif Backward 1 10 0.102706 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: DGGGYGKGGC GGGGGYGGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 2 Motif 2 Original Motif Reverse Complement Backward 1 10 0.103809 Consensus sequence (original motif): RGRAGARRGARRAR Consensus sequence (reverse complement motif): MTMMTCMMTCTKCK Alignment: MTMMTCMMTCTKCK ----CCCCKCCCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 23 Egr1 Original Motif Reverse Complement Forward 1 10 0.106429 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: YCGCCCACGCH CCCCKCCCCC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 31 Pax5 Original Motif Reverse Complement Forward 8 10 0.11125 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD -------CCCCKCCCCC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 53 Motif name: HIF1AARNT Consensus sequence (original motif): VBACGTGV Consensus sequence (reverse complement motif): VCACGTBV *************************************************************** Best Matches for Top Significant Motif ID 53 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 29 HIF1AARNT Original Motif Original Motif Forward 1 8 0 Consensus sequence (original motif): VBACGTGV Consensus sequence (reverse complement motif): VCACGTBV Alignment: VBACGTGV VBACGTGV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 33 Mycn Original Motif Reverse Complement Backward 2 8 0.0575825 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: GCCACGTGSD -VBACGTGV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 Myc Original Motif Reverse Complement Backward 2 8 0.0597215 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: DCCACGTGCV -VBACGTGV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 40 kcACCTGCAgc Reverse Complement Reverse Complement Backward 1 8 0.0748197 Consensus sequence (original motif): BCACCTGCABC Consensus sequence (reverse complement motif): GBTGCAGGTGB Alignment: GBTGCAGGTGB ---VCACGTBV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 42 sSGTCACGTGACSs Original Motif Reverse Complement Forward 4 8 0.0767561 Consensus sequence (original motif): SGGTCACGTGACCS Consensus sequence (reverse complement motif): SGGTCACGTGACCS Alignment: SGGTCACGTGACCS ---VBACGTGV--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 26 MIZF Reverse Complement Reverse Complement Forward 3 8 0.0829928 Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV Alignment: GCGGACGTTV --VCACGTBV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 31 Pax5 Reverse Complement Reverse Complement Backward 8 8 0.100962 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD -----VCACGTBV------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 44 dhACATTCTkh Original Motif Reverse Complement Forward 1 8 0.109275 Consensus sequence (original motif): DHACATTCTGH Consensus sequence (reverse complement motif): HCAGAATGTHD Alignment: HCAGAATGTHD VBACGTGV--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 GABPA Original Motif Reverse Complement Backward 2 8 0.110088 Consensus sequence (original motif): CCGGAAGTGVV Consensus sequence (reverse complement motif): VVCACTTCCGG Alignment: VVCACTTCCGG --VBACGTGV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 36 csGCCCCGCCCCsc Reverse Complement Original Motif Backward 4 8 0.116389 Consensus sequence (original motif): HVGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCVD Alignment: HVGCCCCGCCCCBB ---VCACGTBV--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 29 Motif name: HIF1AARNT Consensus sequence (original motif): VBACGTGV Consensus sequence (reverse complement motif): VCACGTBV *************************************************************** Best Matches for Top Significant Motif ID 29 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 53 HIF1AARNT Original Motif Original Motif Forward 1 8 0 Consensus sequence (original motif): VBACGTGV Consensus sequence (reverse complement motif): VCACGTBV Alignment: VBACGTGV VBACGTGV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 57 Mycn Original Motif Reverse Complement Backward 2 8 0.0575825 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: GCCACGTGSD -VBACGTGV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 58 Myc Original Motif Reverse Complement Backward 2 8 0.0597215 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: DCCACGTGCV -VBACGTGV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 40 kcACCTGCAgc Reverse Complement Reverse Complement Backward 1 8 0.0748197 Consensus sequence (original motif): BCACCTGCABC Consensus sequence (reverse complement motif): GBTGCAGGTGB Alignment: GBTGCAGGTGB ---VCACGTBV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 42 sSGTCACGTGACSs Reverse Complement Original Motif Forward 4 8 0.0767561 Consensus sequence (original motif): SGGTCACGTGACCS Consensus sequence (reverse complement motif): SGGTCACGTGACCS Alignment: SGGTCACGTGACCS ---VCACGTBV--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 50 MIZF Reverse Complement Reverse Complement Forward 3 8 0.0829928 Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV Alignment: GCGGACGTTV --VCACGTBV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 55 Pax5 Reverse Complement Reverse Complement Backward 8 8 0.100962 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD -----VCACGTBV------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 44 dhACATTCTkh Reverse Complement Original Motif Backward 4 8 0.109275 Consensus sequence (original motif): DHACATTCTGH Consensus sequence (reverse complement motif): HCAGAATGTHD Alignment: DHACATTCTGH VCACGTBV--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 59 GABPA Reverse Complement Original Motif Backward 2 8 0.110088 Consensus sequence (original motif): CCGGAAGTGVV Consensus sequence (reverse complement motif): VVCACTTCCGG Alignment: CCGGAAGTGVV --VCACGTBV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 36 csGCCCCGCCCCsc Original Motif Reverse Complement Backward 4 8 0.116389 Consensus sequence (original motif): HVGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCVD Alignment: BBGGGGCGGGGCVD ---VBACGTGV--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 51 Motif name: Klf4 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD *************************************************************** Best Matches for Top Significant Motif ID 51 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 27 Klf4 Original Motif Original Motif Backward 1 10 0 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: DGGGYGKGGC DGGGYGKGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 7 Motif 7 Reverse Complement Original Motif Forward 3 10 0.0516385 Consensus sequence (original motif): CSKCCCCGCCCCSY Consensus sequence (reverse complement motif): MSGGGGCGGGGYSG Alignment: CSKCCCCGCCCCSY --GCCYCMCCCD-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 36 csGCCCCGCCCCsc Reverse Complement Original Motif Forward 3 10 0.0524114 Consensus sequence (original motif): HVGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCVD Alignment: HVGCCCCGCCCCBB --GCCYCMCCCD-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 38 cccGCCCCGCCCCsb Reverse Complement Original Motif Forward 3 10 0.0558821 Consensus sequence (original motif): BCCGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCGGB Alignment: BCCGCCCCGCCCCBB --GCCYCMCCCD--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 22 Zfx Reverse Complement Original Motif Backward 4 10 0.0987519 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV -GCCYCMCCCD--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 24 SP1 Original Motif Reverse Complement Backward 1 10 0.102706 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: GGGGGYGGGG DGGGYGKGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 Myc Original Motif Original Motif Backward 1 10 0.105078 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: VGCACGTGGH DGGGYGKGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 31 Pax5 Original Motif Original Motif Forward 9 10 0.105953 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR --------DGGGYGKGGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 33 Mycn Original Motif Original Motif Forward 1 10 0.10603 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: HSCACGTGGC DGGGYGKGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 2 Motif 2 Reverse Complement Reverse Complement Backward 4 10 0.110488 Consensus sequence (original motif): RGRAGARRGARRAR Consensus sequence (reverse complement motif): MTMMTCMMTCTKCK Alignment: MTMMTCMMTCTKCK -GCCYCMCCCD--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 27 Motif name: Klf4 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD *************************************************************** Best Matches for Top Significant Motif ID 27 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 51 Klf4 Original Motif Original Motif Forward 1 10 0 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: DGGGYGKGGC DGGGYGKGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 7 Motif 7 Reverse Complement Original Motif Forward 3 10 0.0516385 Consensus sequence (original motif): CSKCCCCGCCCCSY Consensus sequence (reverse complement motif): MSGGGGCGGGGYSG Alignment: CSKCCCCGCCCCSY --GCCYCMCCCD-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 36 csGCCCCGCCCCsc Original Motif Reverse Complement Backward 3 10 0.0524114 Consensus sequence (original motif): HVGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCVD Alignment: BBGGGGCGGGGCVD --DGGGYGKGGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 38 cccGCCCCGCCCCsb Original Motif Reverse Complement Forward 3 10 0.0558821 Consensus sequence (original motif): BCCGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCGGB Alignment: BBGGGGCGGGGCGGB --DGGGYGKGGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 46 Zfx Original Motif Reverse Complement Backward 4 10 0.0987519 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: VAGGCCBBGGCVBB -DGGGYGKGGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 48 SP1 Reverse Complement Original Motif Backward 1 10 0.102706 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: CCCCKCCCCC GCCYCMCCCD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 58 Myc Original Motif Original Motif Backward 1 10 0.105078 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: VGCACGTGGH DGGGYGKGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 55 Pax5 Original Motif Original Motif Forward 9 10 0.105953 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR --------DGGGYGKGGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 57 Mycn Original Motif Original Motif Forward 1 10 0.10603 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: HSCACGTGGC DGGGYGKGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 2 Motif 2 Reverse Complement Reverse Complement Backward 4 10 0.110488 Consensus sequence (original motif): RGRAGARRGARRAR Consensus sequence (reverse complement motif): MTMMTCMMTCTKCK Alignment: MTMMTCMMTCTKCK -GCCYCMCCCD--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- **************************************************************************************************************************************************************************************************** **************************************************************** Significant Motifs - Global and Local Matching (Highest to Lowest) **************************************************************** Dataset #: 4 Motif ID: 45 Motif name: wbgTAAATAww Consensus sequence (original motif): DBGTAAATAHD Consensus sequence (reverse complement motif): DHTATTTACBD ************************************************************** Best Matches for Significant Motif ID 45 (Highest to Lowest) ************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 37 tkAAATAATAtw Original Motif Original Motif Backward 1 11 0.00892084 Consensus sequence (original motif): HDAAATAATAHW Consensus sequence (reverse complement motif): WHTATTATTTDH Alignment: HDAAATAATAHW -DBGTAAATAHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 41 wwAAATAATAtw Reverse Complement Reverse Complement Backward 2 11 0.00917337 Consensus sequence (original motif): HDAAATAATADD Consensus sequence (reverse complement motif): DDTATTATTTDH Alignment: DDTATTATTTDH DHTATTTACBD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 9 Motif 9 Reverse Complement Original Motif Backward 4 11 0.0177412 Consensus sequence (original motif): AATHATATWTHAAA Consensus sequence (reverse complement motif): TTTDAWATATHATT Alignment: AATHATATWTHAAA DHTATTTACBD--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 6 Motif 6 Original Motif Original Motif Backward 1 11 0.0205821 Consensus sequence (original motif): AATTYDGAARTAWW Consensus sequence (reverse complement motif): WWTAKTTCDKAATT Alignment: AATTYDGAARTAWW ---DBGTAAATAHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 4 Motif 4 Reverse Complement Original Motif Forward 1 11 0.0288058 Consensus sequence (original motif): AAAAWTTRCWT Consensus sequence (reverse complement motif): AWGKAAWTTTT Alignment: AAAAWTTRCWT DHTATTTACBD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 3 Motif 3 Reverse Complement Original Motif Backward 2 11 0.0337252 Consensus sequence (original motif): AWAAAWTWAAASWA Consensus sequence (reverse complement motif): TWSTTTWAWTTTWT Alignment: AWAAAWTWAAASWA --DHTATTTACBD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 43 wsTACwGTAsw Reverse Complement Original Motif Backward 1 11 0.0399273 Consensus sequence (original motif): HVTACWGTABD Consensus sequence (reverse complement motif): DBTACWGTAVH Alignment: HVTACWGTABD DHTATTTACBD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 5 Motif 5 Reverse Complement Original Motif Backward 1 11 0.0404685 Consensus sequence (original motif): AWTAAATAYAATTT Consensus sequence (reverse complement motif): AAATTKTATTTAWT Alignment: AWTAAATAYAATTT ---DHTATTTACBD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 31 Pax5 Original Motif Original Motif Backward 10 11 0.0439858 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR DBGTAAATAHD--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 55 Pax5 Original Motif Original Motif Forward 1 11 0.0439858 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR DBGTAAATAHD--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 44 Motif name: dhACATTCTkh Consensus sequence (original motif): DHACATTCTGH Consensus sequence (reverse complement motif): HCAGAATGTHD ************************************************************** Best Matches for Significant Motif ID 44 (Highest to Lowest) ************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 40 kcACCTGCAgc Original Motif Original Motif Backward 1 11 0.0238442 Consensus sequence (original motif): BCACCTGCABC Consensus sequence (reverse complement motif): GBTGCAGGTGB Alignment: BCACCTGCABC DHACATTCTGH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 16 Motif 16 Reverse Complement Reverse Complement Backward 4 11 0.0258838 Consensus sequence (original motif): ACAAWTRATTTTGA Consensus sequence (reverse complement motif): TCAAAATKAWTTGT Alignment: TCAAAATKAWTTGT HCAGAATGTHD--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 41 wwAAATAATAtw Reverse Complement Reverse Complement Forward 2 11 0.0292508 Consensus sequence (original motif): HDAAATAATADD Consensus sequence (reverse complement motif): DDTATTATTTDH Alignment: DDTATTATTTDH -HCAGAATGTHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 37 tkAAATAATAtw Reverse Complement Reverse Complement Backward 1 11 0.0364899 Consensus sequence (original motif): HDAAATAATAHW Consensus sequence (reverse complement motif): WHTATTATTTDH Alignment: WHTATTATTTDH -HCAGAATGTHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 6 Motif 6 Reverse Complement Original Motif Backward 4 11 0.0400884 Consensus sequence (original motif): AATTYDGAARTAWW Consensus sequence (reverse complement motif): WWTAKTTCDKAATT Alignment: AATTYDGAARTAWW HCAGAATGTHD--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 39 kCAGCCAATmr Original Motif Reverse Complement Forward 1 11 0.0412582 Consensus sequence (original motif): DCAGCCAATVR Consensus sequence (reverse complement motif): MBATTGGCTGH Alignment: MBATTGGCTGH DHACATTCTGH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 59 GABPA Original Motif Reverse Complement Forward 1 11 0.0418896 Consensus sequence (original motif): CCGGAAGTGVV Consensus sequence (reverse complement motif): VVCACTTCCGG Alignment: VVCACTTCCGG DHACATTCTGH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 GABPA Reverse Complement Original Motif Forward 1 11 0.0418896 Consensus sequence (original motif): CCGGAAGTGVV Consensus sequence (reverse complement motif): VVCACTTCCGG Alignment: CCGGAAGTGVV HCAGAATGTHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 15 Motif 15 Reverse Complement Reverse Complement Backward 2 11 0.0448232 Consensus sequence (original motif): ATMACAATAAAA Consensus sequence (reverse complement motif): TTTTATTGTYAT Alignment: TTTTATTGTYAT HCAGAATGTHD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 2 Motif 2 Reverse Complement Original Motif Forward 3 11 0.045689 Consensus sequence (original motif): RGRAGARRGARRAR Consensus sequence (reverse complement motif): MTMMTCMMTCTKCK Alignment: RGRAGARRGARRAR --HCAGAATGTHD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 40 Motif name: kcACCTGCAgc Consensus sequence (original motif): BCACCTGCABC Consensus sequence (reverse complement motif): GBTGCAGGTGB ************************************************************** Best Matches for Significant Motif ID 40 (Highest to Lowest) ************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 43 wsTACwGTAsw Original Motif Reverse Complement Backward 1 11 0.0215284 Consensus sequence (original motif): HVTACWGTABD Consensus sequence (reverse complement motif): DBTACWGTAVH Alignment: DBTACWGTAVH BCACCTGCABC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 44 dhACATTCTkh Original Motif Original Motif Backward 1 11 0.0254134 Consensus sequence (original motif): DHACATTCTGH Consensus sequence (reverse complement motif): HCAGAATGTHD Alignment: DHACATTCTGH BCACCTGCABC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 42 sSGTCACGTGACSs Original Motif Original Motif Forward 4 11 0.031338 Consensus sequence (original motif): SGGTCACGTGACCS Consensus sequence (reverse complement motif): SGGTCACGTGACCS Alignment: SGGTCACGTGACCS ---BCACCTGCABC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 36 csGCCCCGCCCCsc Original Motif Original Motif Backward 3 11 0.0402518 Consensus sequence (original motif): HVGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCVD Alignment: HVGCCCCGCCCCBB -BCACCTGCABC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 7 Motif 7 Original Motif Original Motif Forward 2 11 0.0411257 Consensus sequence (original motif): CSKCCCCGCCCCSY Consensus sequence (reverse complement motif): MSGGGGCGGGGYSG Alignment: CSKCCCCGCCCCSY -BCACCTGCABC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 55 Pax5 Original Motif Reverse Complement Backward 6 11 0.0420218 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD ----BCACCTGCABC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 31 Pax5 Reverse Complement Original Motif Forward 5 11 0.0420218 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR ----GBTGCAGGTGB----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 GABPA Reverse Complement Original Motif Backward 1 11 0.0423275 Consensus sequence (original motif): CCGGAAGTGVV Consensus sequence (reverse complement motif): VVCACTTCCGG Alignment: CCGGAAGTGVV GBTGCAGGTGB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 59 GABPA Original Motif Reverse Complement Backward 1 11 0.0423275 Consensus sequence (original motif): CCGGAAGTGVV Consensus sequence (reverse complement motif): VVCACTTCCGG Alignment: VVCACTTCCGG BCACCTGCABC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 39 kCAGCCAATmr Reverse Complement Original Motif Forward 1 11 0.0439586 Consensus sequence (original motif): DCAGCCAATVR Consensus sequence (reverse complement motif): MBATTGGCTGH Alignment: DCAGCCAATVR GBTGCAGGTGB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 21 Motif name: Motif 21 Consensus sequence (original motif): ATAAAA Consensus sequence (reverse complement motif): TTTTAT ************************************************************** Best Matches for Significant Motif ID 21 (Highest to Lowest) ************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 15 Motif 15 Reverse Complement Reverse Complement Forward 1 6 0 Consensus sequence (original motif): ATMACAATAAAA Consensus sequence (reverse complement motif): TTTTATTGTYAT Alignment: TTTTATTGTYAT TTTTAT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 5 Motif 5 Reverse Complement Reverse Complement Forward 4 6 0.0208333 Consensus sequence (original motif): AWTAAATAYAATTT Consensus sequence (reverse complement motif): AAATTKTATTTAWT Alignment: AAATTKTATTTAWT ---TTTTAT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 11 Motif 11 Original Motif Reverse Complement Backward 5 6 0.0208333 Consensus sequence (original motif): ATTTWATGAAA Consensus sequence (reverse complement motif): TTTCATWAAAT Alignment: TTTCATWAAAT -ATAAAA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 8 Motif 8 Reverse Complement Reverse Complement Forward 4 6 0.0208333 Consensus sequence (original motif): AAATRWTAAAATCA Consensus sequence (reverse complement motif): TGATTTTAWKATTT Alignment: TGATTTTAWKATTT ---TTTTAT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 10 Motif 10 Reverse Complement Original Motif Forward 5 6 0.0416667 Consensus sequence (original motif): TTTCATAAWT Consensus sequence (reverse complement motif): AWTTATGAAA Alignment: TTTCATAAWT ----TTTTAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 Motif 19 Reverse Complement Reverse Complement Forward 1 6 0.0625 Consensus sequence (original motif): TTCWTAGATTAWA Consensus sequence (reverse complement motif): TWTAATCTAWGAA Alignment: TWTAATCTAWGAA TTTTAT------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 14 Motif 14 Reverse Complement Reverse Complement Backward 1 6 0.0625 Consensus sequence (original motif): AWAAATAA Consensus sequence (reverse complement motif): TTATTTWT Alignment: TTATTTWT --TTTTAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 Motif 20 Reverse Complement Reverse Complement Backward 1 6 0.0625 Consensus sequence (original motif): TTMAAAGATTT Consensus sequence (reverse complement motif): AAATCTTTYAA Alignment: AAATCTTTYAA -----TTTTAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 41 wwAAATAATAtw Reverse Complement Reverse Complement Forward 3 6 0.0632716 Consensus sequence (original motif): HDAAATAATADD Consensus sequence (reverse complement motif): DDTATTATTTDH Alignment: DDTATTATTTDH --TTTTAT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 3 Motif 3 Reverse Complement Reverse Complement Forward 4 6 0.0689103 Consensus sequence (original motif): AWAAAWTWAAASWA Consensus sequence (reverse complement motif): TWSTTTWAWTTTWT Alignment: TWSTTTWAWTTTWT ---TTTTAT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 32 Motif name: ArntAhr Consensus sequence (original motif): YGCGTG Consensus sequence (reverse complement motif): CACGCM ************************************************************** Best Matches for Significant Motif ID 32 (Highest to Lowest) ************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 56 ArntAhr Original Motif Original Motif Backward 1 6 0 Consensus sequence (original motif): YGCGTG Consensus sequence (reverse complement motif): CACGCM Alignment: YGCGTG YGCGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 47 Egr1 Reverse Complement Reverse Complement Backward 1 6 0.0340278 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: YCGCCCACGCH -----CACGCM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 23 Egr1 Original Motif Original Motif Forward 1 6 0.0340278 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: HGCGTGGGCGK YGCGTG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 29 HIF1AARNT Original Motif Original Motif Forward 2 6 0.0452724 Consensus sequence (original motif): VBACGTGV Consensus sequence (reverse complement motif): VCACGTBV Alignment: VBACGTGV -YGCGTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 53 HIF1AARNT Original Motif Original Motif Backward 2 6 0.0452724 Consensus sequence (original motif): VBACGTGV Consensus sequence (reverse complement motif): VCACGTBV Alignment: VBACGTGV -YGCGTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 57 Mycn Original Motif Reverse Complement Forward 3 6 0.0718227 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: GCCACGTGSD --YGCGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 33 Mycn Original Motif Reverse Complement Forward 3 6 0.0718227 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: GCCACGTGSD --YGCGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 36 csGCCCCGCCCCsc Reverse Complement Original Motif Forward 5 6 0.0736681 Consensus sequence (original motif): HVGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCVD Alignment: HVGCCCCGCCCCBB ----CACGCM---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 Myc Original Motif Reverse Complement Forward 3 6 0.0739492 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: DCCACGTGCV --YGCGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 58 Myc Original Motif Reverse Complement Forward 3 6 0.0739492 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: DCCACGTGCV --YGCGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 56 Motif name: ArntAhr Consensus sequence (original motif): YGCGTG Consensus sequence (reverse complement motif): CACGCM ************************************************************** Best Matches for Significant Motif ID 56 (Highest to Lowest) ************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 32 ArntAhr Original Motif Original Motif Backward 1 6 0 Consensus sequence (original motif): YGCGTG Consensus sequence (reverse complement motif): CACGCM Alignment: YGCGTG YGCGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 47 Egr1 Reverse Complement Reverse Complement Backward 1 6 0.0340278 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: YCGCCCACGCH -----CACGCM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 23 Egr1 Original Motif Original Motif Forward 1 6 0.0340278 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: HGCGTGGGCGK YGCGTG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 53 HIF1AARNT Original Motif Original Motif Forward 2 6 0.0452724 Consensus sequence (original motif): VBACGTGV Consensus sequence (reverse complement motif): VCACGTBV Alignment: VBACGTGV -YGCGTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 29 HIF1AARNT Original Motif Original Motif Forward 2 6 0.0452724 Consensus sequence (original motif): VBACGTGV Consensus sequence (reverse complement motif): VCACGTBV Alignment: VBACGTGV -YGCGTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 33 Mycn Reverse Complement Original Motif Forward 3 6 0.0718227 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: HSCACGTGGC --CACGCM-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 57 Mycn Original Motif Reverse Complement Forward 3 6 0.0718227 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: GCCACGTGSD --YGCGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 36 csGCCCCGCCCCsc Original Motif Reverse Complement Forward 5 6 0.0736681 Consensus sequence (original motif): HVGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCVD Alignment: BBGGGGCGGGGCVD ----YGCGTG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 58 Myc Original Motif Reverse Complement Forward 3 6 0.0739492 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: DCCACGTGCV --YGCGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 Myc Reverse Complement Original Motif Backward 3 6 0.0739492 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: VGCACGTGGH --CACGCM-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 10 Motif name: Motif 10 Consensus sequence (original motif): TTTCATAAWT Consensus sequence (reverse complement motif): AWTTATGAAA ************************************************************** Best Matches for Significant Motif ID 10 (Highest to Lowest) ************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 11 Motif 11 Reverse Complement Original Motif Forward 2 10 0.01875 Consensus sequence (original motif): ATTTWATGAAA Consensus sequence (reverse complement motif): TTTCATWAAAT Alignment: ATTTWATGAAA -AWTTATGAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 6 Motif 6 Reverse Complement Original Motif Forward 5 10 0.0375 Consensus sequence (original motif): AATTYDGAARTAWW Consensus sequence (reverse complement motif): WWTAKTTCDKAATT Alignment: AATTYDGAARTAWW ----AWTTATGAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 8 Motif 8 Original Motif Reverse Complement Forward 2 10 0.04375 Consensus sequence (original motif): AAATRWTAAAATCA Consensus sequence (reverse complement motif): TGATTTTAWKATTT Alignment: TGATTTTAWKATTT -TTTCATAAWT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 5 Motif 5 Reverse Complement Original Motif Backward 1 10 0.05625 Consensus sequence (original motif): AWTAAATAYAATTT Consensus sequence (reverse complement motif): AAATTKTATTTAWT Alignment: AWTAAATAYAATTT ----AWTTATGAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 17 Motif 17 Original Motif Reverse Complement Backward 1 10 0.05625 Consensus sequence (original motif): AAAAATGAAT Consensus sequence (reverse complement motif): ATTCATTTTT Alignment: ATTCATTTTT TTTCATAAWT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 9 Motif 9 Original Motif Reverse Complement Forward 5 10 0.0604166 Consensus sequence (original motif): AATHATATWTHAAA Consensus sequence (reverse complement motif): TTTDAWATATHATT Alignment: TTTDAWATATHATT ----TTTCATAAWT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 15 Motif 15 Original Motif Reverse Complement Forward 1 10 0.06875 Consensus sequence (original motif): ATMACAATAAAA Consensus sequence (reverse complement motif): TTTTATTGTYAT Alignment: TTTTATTGTYAT TTTCATAAWT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 3 Motif 3 Reverse Complement Original Motif Backward 1 10 0.0706731 Consensus sequence (original motif): AWAAAWTWAAASWA Consensus sequence (reverse complement motif): TWSTTTWAWTTTWT Alignment: AWAAAWTWAAASWA ----AWTTATGAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 Motif 18 Original Motif Original Motif Forward 1 10 0.08125 Consensus sequence (original motif): TTAGWTWATAA Consensus sequence (reverse complement motif): TTATWAWCTAA Alignment: TTAGWTWATAA TTTCATAAWT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 Motif 19 Original Motif Reverse Complement Backward 4 10 0.08125 Consensus sequence (original motif): TTCWTAGATTAWA Consensus sequence (reverse complement motif): TWTAATCTAWGAA Alignment: TWTAATCTAWGAA TTTCATAAWT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 1 Motif name: Motif 1 Consensus sequence (original motif): GGCGGGGC Consensus sequence (reverse complement motif): GCCCCGCC ************************************************************** Best Matches for Significant Motif ID 1 (Highest to Lowest) ************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 36 csGCCCCGCCCCsc Reverse Complement Original Motif Backward 5 8 0 Consensus sequence (original motif): HVGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCVD Alignment: HVGCCCCGCCCCBB --GCCCCGCC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 38 cccGCCCCGCCCCsb Reverse Complement Original Motif Backward 5 8 0.00250079 Consensus sequence (original motif): BCCGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCGGB Alignment: BCCGCCCCGCCCCBB ---GCCCCGCC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 7 Motif 7 Original Motif Reverse Complement Forward 5 8 0.0149958 Consensus sequence (original motif): CSKCCCCGCCCCSY Consensus sequence (reverse complement motif): MSGGGGCGGGGYSG Alignment: MSGGGGCGGGGYSG ----GGCGGGGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 51 Klf4 Original Motif Original Motif Forward 3 8 0.0349983 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: DGGGYGKGGC --GGCGGGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 27 Klf4 Original Motif Original Motif Forward 3 8 0.0349983 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: DGGGYGKGGC --GGCGGGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 22 Zfx Reverse Complement Reverse Complement Forward 4 8 0.0708224 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: VAGGCCBBGGCVBB ---GCCCCGCC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 46 Zfx Reverse Complement Reverse Complement Forward 4 8 0.0708224 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: VAGGCCBBGGCVBB ---GCCCCGCC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 55 Pax5 Original Motif Original Motif Backward 3 8 0.0853847 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR ----------GGCGGGGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 31 Pax5 Original Motif Original Motif Backward 3 8 0.0853847 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR ----------GGCGGGGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 23 Egr1 Original Motif Original Motif Backward 4 8 0.0878731 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: HGCGTGGGCGK GGCGGGGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 47 Egr1 Original Motif Original Motif Backward 4 8 0.0878731 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: HGCGTGGGCGK GGCGGGGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 29 Motif name: HIF1AARNT Consensus sequence (original motif): VBACGTGV Consensus sequence (reverse complement motif): VCACGTBV ************************************************************** Best Matches for Significant Motif ID 29 (Highest to Lowest) ************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 53 HIF1AARNT Original Motif Original Motif Backward 1 8 0 Consensus sequence (original motif): VBACGTGV Consensus sequence (reverse complement motif): VCACGTBV Alignment: VBACGTGV VBACGTGV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 57 Mycn Original Motif Reverse Complement Backward 2 8 0.0575825 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: GCCACGTGSD -VBACGTGV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 33 Mycn Original Motif Reverse Complement Backward 2 8 0.0575825 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: GCCACGTGSD -VBACGTGV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 58 Myc Original Motif Reverse Complement Forward 2 8 0.0597215 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: DCCACGTGCV -VBACGTGV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 Myc Original Motif Reverse Complement Forward 2 8 0.0597215 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: DCCACGTGCV -VBACGTGV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 40 kcACCTGCAgc Original Motif Original Motif Backward 4 8 0.0748197 Consensus sequence (original motif): BCACCTGCABC Consensus sequence (reverse complement motif): GBTGCAGGTGB Alignment: BCACCTGCABC VBACGTGV--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 42 sSGTCACGTGACSs Reverse Complement Original Motif Forward 4 8 0.0767561 Consensus sequence (original motif): SGGTCACGTGACCS Consensus sequence (reverse complement motif): SGGTCACGTGACCS Alignment: SGGTCACGTGACCS ---VCACGTBV--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 50 MIZF Reverse Complement Reverse Complement Forward 3 8 0.0829928 Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV Alignment: GCGGACGTTV --VCACGTBV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 26 MIZF Reverse Complement Reverse Complement Forward 3 8 0.0829928 Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV Alignment: GCGGACGTTV --VCACGTBV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 31 Pax5 Reverse Complement Reverse Complement Backward 8 8 0.100962 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD -----VCACGTBV------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 53 Motif name: HIF1AARNT Consensus sequence (original motif): VBACGTGV Consensus sequence (reverse complement motif): VCACGTBV ************************************************************** Best Matches for Significant Motif ID 53 (Highest to Lowest) ************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 29 HIF1AARNT Original Motif Original Motif Forward 1 8 0 Consensus sequence (original motif): VBACGTGV Consensus sequence (reverse complement motif): VCACGTBV Alignment: VBACGTGV VBACGTGV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 57 Mycn Original Motif Reverse Complement Backward 2 8 0.0575825 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: GCCACGTGSD -VBACGTGV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 33 Mycn Original Motif Reverse Complement Forward 2 8 0.0575825 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: GCCACGTGSD -VBACGTGV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 58 Myc Original Motif Reverse Complement Backward 2 8 0.0597215 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: DCCACGTGCV -VBACGTGV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 Myc Reverse Complement Original Motif Forward 2 8 0.0597215 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: VGCACGTGGH -VCACGTBV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 40 kcACCTGCAgc Reverse Complement Reverse Complement Forward 4 8 0.0748197 Consensus sequence (original motif): BCACCTGCABC Consensus sequence (reverse complement motif): GBTGCAGGTGB Alignment: GBTGCAGGTGB ---VCACGTBV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 42 sSGTCACGTGACSs Original Motif Reverse Complement Forward 4 8 0.0767561 Consensus sequence (original motif): SGGTCACGTGACCS Consensus sequence (reverse complement motif): SGGTCACGTGACCS Alignment: SGGTCACGTGACCS ---VBACGTGV--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 26 MIZF Reverse Complement Reverse Complement Forward 3 8 0.0829928 Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV Alignment: GCGGACGTTV --VCACGTBV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 50 MIZF Reverse Complement Reverse Complement Forward 3 8 0.0829928 Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV Alignment: GCGGACGTTV --VCACGTBV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 55 Pax5 Reverse Complement Reverse Complement Backward 8 8 0.100962 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD -----VCACGTBV------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- **************************************************************************************************************************************************************************************************** ********************************************************************** Best Matches for Each Motif (Highest to Lowest) ***************************************************************************** Dataset #: 1 Motif ID: 1 Motif name: Motif 1 Consensus sequence (original motif): GGCGGGGC Consensus sequence (reverse complement motif): GCCCCGCC ************************************************************************ Best Matches for Motif ID 1 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 36 csGCCCCGCCCCsc Reverse Complement Original Motif Backward 5 8 0 Consensus sequence (original motif): HVGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCVD Alignment: HVGCCCCGCCCCBB --GCCCCGCC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 38 cccGCCCCGCCCCsb Reverse Complement Original Motif Backward 5 8 0.00250079 Consensus sequence (original motif): BCCGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCGGB Alignment: BCCGCCCCGCCCCBB ---GCCCCGCC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 7 Motif 7 Original Motif Reverse Complement Forward 5 8 0.0149958 Consensus sequence (original motif): CSKCCCCGCCCCSY Consensus sequence (reverse complement motif): MSGGGGCGGGGYSG Alignment: MSGGGGCGGGGYSG ----GGCGGGGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 51 Klf4 Original Motif Original Motif Forward 3 8 0.0349983 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: DGGGYGKGGC --GGCGGGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 27 Klf4 Original Motif Original Motif Forward 3 8 0.0349983 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: DGGGYGKGGC --GGCGGGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 22 Zfx Reverse Complement Reverse Complement Forward 4 8 0.0708224 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: VAGGCCBBGGCVBB ---GCCCCGCC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 46 Zfx Reverse Complement Reverse Complement Forward 4 8 0.0708224 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: VAGGCCBBGGCVBB ---GCCCCGCC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 55 Pax5 Original Motif Original Motif Backward 3 8 0.0853847 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR ----------GGCGGGGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 31 Pax5 Original Motif Original Motif Backward 3 8 0.0853847 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR ----------GGCGGGGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 23 Egr1 Original Motif Original Motif Backward 4 8 0.0878731 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: HGCGTGGGCGK GGCGGGGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 47 Egr1 Original Motif Original Motif Backward 4 8 0.0878731 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: HGCGTGGGCGK GGCGGGGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 2 Motif name: Motif 2 Consensus sequence (original motif): RGRAGARRGARRAR Consensus sequence (reverse complement motif): MTMMTCMMTCTKCK ************************************************************************ Best Matches for Motif ID 2 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 55 Pax5 Reverse Complement Reverse Complement Forward 7 14 0.0197704 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD ------MTMMTCMMTCTKCK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 31 Pax5 Reverse Complement Reverse Complement Forward 7 14 0.0197704 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD ------MTMMTCMMTCTKCK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 3 Motif 3 Original Motif Original Motif Forward 2 13 0.547476 Consensus sequence (original motif): AWAAAWTWAAASWA Consensus sequence (reverse complement motif): TWSTTTWAWTTTWT Alignment: AWAAAWTWAAASWA- -RGRAGARRGARRAR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 7 Motif 7 Original Motif Reverse Complement Backward 4 11 1.54373 Consensus sequence (original motif): CSKCCCCGCCCCSY Consensus sequence (reverse complement motif): MSGGGGCGGGGYSG Alignment: ---MSGGGGCGGGGYSG RGRAGARRGARRAR--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 36 csGCCCCGCCCCsc Original Motif Reverse Complement Forward 4 11 1.54718 Consensus sequence (original motif): HVGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCVD Alignment: BBGGGGCGGGGCVD--- ---RGRAGARRGARRAR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 24 SP1 Original Motif Reverse Complement Backward 1 10 2.0297 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: ----GGGGGYGGGG RGRAGARRGARRAR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 48 SP1 Original Motif Reverse Complement Backward 1 10 2.0297 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: ----GGGGGYGGGG RGRAGARRGARRAR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 45 wbgTAAATAww Reverse Complement Reverse Complement Backward 2 10 2.03935 Consensus sequence (original motif): DBGTAAATAHD Consensus sequence (reverse complement motif): DHTATTTACBD Alignment: ----DHTATTTACBD MTMMTCMMTCTKCK- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 30 PLAG1 Original Motif Original Motif Backward 5 10 2.04042 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: ----GGGGCCCAAGGGGG RGRAGARRGARRAR---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 54 PLAG1 Original Motif Original Motif Backward 5 10 2.04042 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: ----GGGGCCCAAGGGGG RGRAGARRGARRAR---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 3 Motif name: Motif 3 Consensus sequence (original motif): AWAAAWTWAAASWA Consensus sequence (reverse complement motif): TWSTTTWAWTTTWT ************************************************************************ Best Matches for Motif ID 3 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 8 Motif 8 Reverse Complement Reverse Complement Backward 1 14 0.0394231 Consensus sequence (original motif): AAATRWTAAAATCA Consensus sequence (reverse complement motif): TGATTTTAWKATTT Alignment: TGATTTTAWKATTT TWSTTTWAWTTTWT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 5 Motif 5 Reverse Complement Reverse Complement Backward 1 14 0.0449176 Consensus sequence (original motif): AWTAAATAYAATTT Consensus sequence (reverse complement motif): AAATTKTATTTAWT Alignment: AAATTKTATTTAWT TWSTTTWAWTTTWT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 9 Motif 9 Original Motif Reverse Complement Backward 1 14 0.0594551 Consensus sequence (original motif): AATHATATWTHAAA Consensus sequence (reverse complement motif): TTTDAWATATHATT Alignment: TTTDAWATATHATT AWAAAWTWAAASWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 6 Motif 6 Reverse Complement Reverse Complement Backward 1 14 0.067239 Consensus sequence (original motif): AATTYDGAARTAWW Consensus sequence (reverse complement motif): WWTAKTTCDKAATT Alignment: WWTAKTTCDKAATT TWSTTTWAWTTTWT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 2 Motif 2 Original Motif Original Motif Backward 2 13 0.564853 Consensus sequence (original motif): RGRAGARRGARRAR Consensus sequence (reverse complement motif): MTMMTCMMTCTKCK Alignment: -RGRAGARRGARRAR AWAAAWTWAAASWA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 41 wwAAATAATAtw Original Motif Original Motif Forward 1 12 1.04022 Consensus sequence (original motif): HDAAATAATADD Consensus sequence (reverse complement motif): DDTATTATTTDH Alignment: HDAAATAATADD-- AWAAAWTWAAASWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 37 tkAAATAATAtw Original Motif Original Motif Backward 1 12 1.04989 Consensus sequence (original motif): HDAAATAATAHW Consensus sequence (reverse complement motif): WHTATTATTTDH Alignment: --HDAAATAATAHW AWAAAWTWAAASWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 15 Motif 15 Original Motif Original Motif Forward 1 12 1.05785 Consensus sequence (original motif): ATMACAATAAAA Consensus sequence (reverse complement motif): TTTTATTGTYAT Alignment: ATMACAATAAAA-- AWAAAWTWAAASWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 45 wbgTAAATAww Original Motif Original Motif Backward 1 11 1.55185 Consensus sequence (original motif): DBGTAAATAHD Consensus sequence (reverse complement motif): DHTATTTACBD Alignment: ---DBGTAAATAHD AWAAAWTWAAASWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 4 Motif 4 Reverse Complement Reverse Complement Backward 1 11 1.55323 Consensus sequence (original motif): AAAAWTTRCWT Consensus sequence (reverse complement motif): AWGKAAWTTTT Alignment: ---AWGKAAWTTTT TWSTTTWAWTTTWT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 4 Motif name: Motif 4 Consensus sequence (original motif): AAAAWTTRCWT Consensus sequence (reverse complement motif): AWGKAAWTTTT ************************************************************************ Best Matches for Motif ID 4 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 5 Motif 5 Original Motif Reverse Complement Forward 1 11 0.0786484 Consensus sequence (original motif): AWTAAATAYAATTT Consensus sequence (reverse complement motif): AAATTKTATTTAWT Alignment: AAATTKTATTTAWT AAAAWTTRCWT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 9 Motif 9 Reverse Complement Original Motif Backward 4 11 0.0820375 Consensus sequence (original motif): AATHATATWTHAAA Consensus sequence (reverse complement motif): TTTDAWATATHATT Alignment: AATHATATWTHAAA AWGKAAWTTTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 8 Motif 8 Reverse Complement Reverse Complement Forward 4 11 0.083433 Consensus sequence (original motif): AAATRWTAAAATCA Consensus sequence (reverse complement motif): TGATTTTAWKATTT Alignment: TGATTTTAWKATTT ---AWGKAAWTTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 16 Motif 16 Original Motif Original Motif Forward 1 11 0.0852273 Consensus sequence (original motif): ACAAWTRATTTTGA Consensus sequence (reverse complement motif): TCAAAATKAWTTGT Alignment: ACAAWTRATTTTGA AAAAWTTRCWT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 45 wbgTAAATAww Original Motif Reverse Complement Backward 1 11 0.086338 Consensus sequence (original motif): DBGTAAATAHD Consensus sequence (reverse complement motif): DHTATTTACBD Alignment: DHTATTTACBD AAAAWTTRCWT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 3 Motif 3 Reverse Complement Reverse Complement Backward 2 11 0.0867914 Consensus sequence (original motif): AWAAAWTWAAASWA Consensus sequence (reverse complement motif): TWSTTTWAWTTTWT Alignment: TWSTTTWAWTTTWT --AWGKAAWTTTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 Motif 20 Original Motif Reverse Complement Backward 1 11 0.0941986 Consensus sequence (original motif): TTMAAAGATTT Consensus sequence (reverse complement motif): AAATCTTTYAA Alignment: AAATCTTTYAA AAAAWTTRCWT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 41 wwAAATAATAtw Original Motif Original Motif Backward 2 11 0.097632 Consensus sequence (original motif): HDAAATAATADD Consensus sequence (reverse complement motif): DDTATTATTTDH Alignment: HDAAATAATADD AAAAWTTRCWT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 37 tkAAATAATAtw Original Motif Original Motif Backward 2 11 0.102771 Consensus sequence (original motif): HDAAATAATAHW Consensus sequence (reverse complement motif): WHTATTATTTDH Alignment: HDAAATAATAHW AAAAWTTRCWT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 6 Motif 6 Reverse Complement Original Motif Backward 1 11 0.103618 Consensus sequence (original motif): AATTYDGAARTAWW Consensus sequence (reverse complement motif): WWTAKTTCDKAATT Alignment: AATTYDGAARTAWW ---AWGKAAWTTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 5 Motif name: Motif 5 Consensus sequence (original motif): AWTAAATAYAATTT Consensus sequence (reverse complement motif): AAATTKTATTTAWT ************************************************************************ Best Matches for Motif ID 5 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 3 Motif 3 Reverse Complement Reverse Complement Backward 1 14 0.101648 Consensus sequence (original motif): AWAAAWTWAAASWA Consensus sequence (reverse complement motif): TWSTTTWAWTTTWT Alignment: TWSTTTWAWTTTWT AAATTKTATTTAWT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 8 Motif 8 Reverse Complement Reverse Complement Forward 1 14 0.107143 Consensus sequence (original motif): AAATRWTAAAATCA Consensus sequence (reverse complement motif): TGATTTTAWKATTT Alignment: TGATTTTAWKATTT AAATTKTATTTAWT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 6 Motif 6 Reverse Complement Original Motif Backward 1 14 0.111607 Consensus sequence (original motif): AATTYDGAARTAWW Consensus sequence (reverse complement motif): WWTAKTTCDKAATT Alignment: AATTYDGAARTAWW AAATTKTATTTAWT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 16 Motif 16 Reverse Complement Original Motif Forward 1 14 0.125 Consensus sequence (original motif): ACAAWTRATTTTGA Consensus sequence (reverse complement motif): TCAAAATKAWTTGT Alignment: ACAAWTRATTTTGA AAATTKTATTTAWT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 9 Motif 9 Original Motif Reverse Complement Forward 2 13 0.596154 Consensus sequence (original motif): AATHATATWTHAAA Consensus sequence (reverse complement motif): TTTDAWATATHATT Alignment: TTTDAWATATHATT- -AWTAAATAYAATTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 Motif 19 Original Motif Original Motif Backward 2 12 1.125 Consensus sequence (original motif): TTCWTAGATTAWA Consensus sequence (reverse complement motif): TWTAATCTAWGAA Alignment: --TTCWTAGATTAWA AWTAAATAYAATTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 15 Motif 15 Reverse Complement Reverse Complement Backward 1 12 1.125 Consensus sequence (original motif): ATMACAATAAAA Consensus sequence (reverse complement motif): TTTTATTGTYAT Alignment: --TTTTATTGTYAT AAATTKTATTTAWT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 11 Motif 11 Reverse Complement Reverse Complement Backward 1 11 1.57955 Consensus sequence (original motif): ATTTWATGAAA Consensus sequence (reverse complement motif): TTTCATWAAAT Alignment: ---TTTCATWAAAT AAATTKTATTTAWT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 4 Motif 4 Original Motif Reverse Complement Forward 1 11 1.5951 Consensus sequence (original motif): AAAAWTTRCWT Consensus sequence (reverse complement motif): AWGKAAWTTTT Alignment: AWGKAAWTTTT--- AWTAAATAYAATTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 Motif 20 Reverse Complement Reverse Complement Forward 1 11 1.61364 Consensus sequence (original motif): TTMAAAGATTT Consensus sequence (reverse complement motif): AAATCTTTYAA Alignment: AAATCTTTYAA--- AAATTKTATTTAWT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 6 Motif name: Motif 6 Consensus sequence (original motif): AATTYDGAARTAWW Consensus sequence (reverse complement motif): WWTAKTTCDKAATT ************************************************************************ Best Matches for Motif ID 6 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 5 Motif 5 Reverse Complement Original Motif Forward 1 14 0.0741071 Consensus sequence (original motif): AWTAAATAYAATTT Consensus sequence (reverse complement motif): AAATTKTATTTAWT Alignment: AWTAAATAYAATTT WWTAKTTCDKAATT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 8 Motif 8 Reverse Complement Reverse Complement Backward 1 14 0.0763393 Consensus sequence (original motif): AAATRWTAAAATCA Consensus sequence (reverse complement motif): TGATTTTAWKATTT Alignment: TGATTTTAWKATTT WWTAKTTCDKAATT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 9 Motif 9 Reverse Complement Reverse Complement Backward 1 14 0.0852679 Consensus sequence (original motif): AATHATATWTHAAA Consensus sequence (reverse complement motif): TTTDAWATATHATT Alignment: TTTDAWATATHATT WWTAKTTCDKAATT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 3 Motif 3 Reverse Complement Reverse Complement Forward 1 14 0.0864698 Consensus sequence (original motif): AWAAAWTWAAASWA Consensus sequence (reverse complement motif): TWSTTTWAWTTTWT Alignment: TWSTTTWAWTTTWT WWTAKTTCDKAATT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 Motif 19 Original Motif Original Motif Backward 2 12 1.06667 Consensus sequence (original motif): TTCWTAGATTAWA Consensus sequence (reverse complement motif): TWTAATCTAWGAA Alignment: --TTCWTAGATTAWA AATTYDGAARTAWW- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 37 tkAAATAATAtw Reverse Complement Reverse Complement Forward 1 12 1.07587 Consensus sequence (original motif): HDAAATAATAHW Consensus sequence (reverse complement motif): WHTATTATTTDH Alignment: WHTATTATTTDH-- WWTAKTTCDKAATT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 41 wwAAATAATAtw Reverse Complement Reverse Complement Forward 1 12 1.07757 Consensus sequence (original motif): HDAAATAATADD Consensus sequence (reverse complement motif): DDTATTATTTDH Alignment: DDTATTATTTDH-- WWTAKTTCDKAATT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 15 Motif 15 Reverse Complement Reverse Complement Forward 1 12 1.08229 Consensus sequence (original motif): ATMACAATAAAA Consensus sequence (reverse complement motif): TTTTATTGTYAT Alignment: TTTTATTGTYAT-- WWTAKTTCDKAATT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 16 Motif 16 Reverse Complement Original Motif Forward 4 11 1.55625 Consensus sequence (original motif): ACAAWTRATTTTGA Consensus sequence (reverse complement motif): TCAAAATKAWTTGT Alignment: ACAAWTRATTTTGA--- ---WWTAKTTCDKAATT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 45 wbgTAAATAww Original Motif Original Motif Backward 1 11 1.55706 Consensus sequence (original motif): DBGTAAATAHD Consensus sequence (reverse complement motif): DHTATTTACBD Alignment: ---DBGTAAATAHD AATTYDGAARTAWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 7 Motif name: Motif 7 Consensus sequence (original motif): CSKCCCCGCCCCSY Consensus sequence (reverse complement motif): MSGGGGCGGGGYSG ************************************************************************ Best Matches for Motif ID 7 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 36 csGCCCCGCCCCsc Original Motif Original Motif Forward 1 14 0 Consensus sequence (original motif): HVGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCVD Alignment: HVGCCCCGCCCCBB CSKCCCCGCCCCSY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 38 cccGCCCCGCCCCsb Original Motif Original Motif Backward 1 14 0.0012818 Consensus sequence (original motif): BCCGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCGGB Alignment: BCCGCCCCGCCCCBB -CSKCCCCGCCCCSY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 55 Pax5 Reverse Complement Original Motif Forward 7 14 0.0662825 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR ------MSGGGGCGGGGYSG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 31 Pax5 Reverse Complement Original Motif Forward 7 14 0.0662825 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR ------MSGGGGCGGGGYSG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 22 Zfx Original Motif Reverse Complement Forward 1 14 0.0912118 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: VAGGCCBBGGCVBB CSKCCCCGCCCCSY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 46 Zfx Original Motif Reverse Complement Forward 1 14 0.0912118 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: VAGGCCBBGGCVBB CSKCCCCGCCCCSY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 42 sSGTCACGTGACSs Reverse Complement Reverse Complement Backward 1 14 0.0948838 Consensus sequence (original motif): SGGTCACGTGACCS Consensus sequence (reverse complement motif): SGGTCACGTGACCS Alignment: SGGTCACGTGACCS MSGGGGCGGGGYSG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 30 PLAG1 Original Motif Reverse Complement Forward 2 13 0.590412 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: CCCCCTTGGGCCCC- -CSKCCCCGCCCCSY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 54 PLAG1 Original Motif Reverse Complement Forward 2 13 0.590412 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: CCCCCTTGGGCCCC- -CSKCCCCGCCCCSY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 23 Egr1 Original Motif Reverse Complement Forward 1 11 1.58474 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: YCGCCCACGCH--- CSKCCCCGCCCCSY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 8 Motif name: Motif 8 Consensus sequence (original motif): AAATRWTAAAATCA Consensus sequence (reverse complement motif): TGATTTTAWKATTT ************************************************************************ Best Matches for Motif ID 8 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 3 Motif 3 Reverse Complement Reverse Complement Backward 1 14 0.0961539 Consensus sequence (original motif): AWAAAWTWAAASWA Consensus sequence (reverse complement motif): TWSTTTWAWTTTWT Alignment: TWSTTTWAWTTTWT TGATTTTAWKATTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 5 Motif 5 Reverse Complement Reverse Complement Backward 1 14 0.107143 Consensus sequence (original motif): AWTAAATAYAATTT Consensus sequence (reverse complement motif): AAATTKTATTTAWT Alignment: AAATTKTATTTAWT TGATTTTAWKATTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 6 Motif 6 Reverse Complement Reverse Complement Backward 1 14 0.113839 Consensus sequence (original motif): AATTYDGAARTAWW Consensus sequence (reverse complement motif): WWTAKTTCDKAATT Alignment: WWTAKTTCDKAATT TGATTTTAWKATTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 9 Motif 9 Original Motif Original Motif Backward 2 13 0.625 Consensus sequence (original motif): AATHATATWTHAAA Consensus sequence (reverse complement motif): TTTDAWATATHATT Alignment: -AATHATATWTHAAA AAATRWTAAAATCA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 15 Motif 15 Original Motif Original Motif Backward 1 12 1.10417 Consensus sequence (original motif): ATMACAATAAAA Consensus sequence (reverse complement motif): TTTTATTGTYAT Alignment: --ATMACAATAAAA AAATRWTAAAATCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 Motif 19 Reverse Complement Reverse Complement Forward 2 12 1.10417 Consensus sequence (original motif): TTCWTAGATTAWA Consensus sequence (reverse complement motif): TWTAATCTAWGAA Alignment: TWTAATCTAWGAA-- -TGATTTTAWKATTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 16 Motif 16 Reverse Complement Reverse Complement Backward 3 12 1.125 Consensus sequence (original motif): ACAAWTRATTTTGA Consensus sequence (reverse complement motif): TCAAAATKAWTTGT Alignment: --TCAAAATKAWTTGT TGATTTTAWKATTT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 Motif 20 Reverse Complement Original Motif Backward 1 11 1.56818 Consensus sequence (original motif): TTMAAAGATTT Consensus sequence (reverse complement motif): AAATCTTTYAA Alignment: ---TTMAAAGATTT TGATTTTAWKATTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 11 Motif 11 Reverse Complement Reverse Complement Backward 1 11 1.59091 Consensus sequence (original motif): ATTTWATGAAA Consensus sequence (reverse complement motif): TTTCATWAAAT Alignment: ---TTTCATWAAAT TGATTTTAWKATTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 4 Motif 4 Reverse Complement Reverse Complement Backward 1 11 1.59988 Consensus sequence (original motif): AAAAWTTRCWT Consensus sequence (reverse complement motif): AWGKAAWTTTT Alignment: ---AWGKAAWTTTT TGATTTTAWKATTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 9 Motif name: Motif 9 Consensus sequence (original motif): AATHATATWTHAAA Consensus sequence (reverse complement motif): TTTDAWATATHATT ************************************************************************ Best Matches for Motif ID 9 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 3 Motif 3 Original Motif Reverse Complement Backward 1 14 0.0675748 Consensus sequence (original motif): AWAAAWTWAAASWA Consensus sequence (reverse complement motif): TWSTTTWAWTTTWT Alignment: TWSTTTWAWTTTWT AATHATATWTHAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 6 Motif 6 Reverse Complement Reverse Complement Backward 1 14 0.0741568 Consensus sequence (original motif): AATTYDGAARTAWW Consensus sequence (reverse complement motif): WWTAKTTCDKAATT Alignment: WWTAKTTCDKAATT TTTDAWATATHATT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 5 Motif 5 Original Motif Reverse Complement Backward 2 13 0.547543 Consensus sequence (original motif): AWTAAATAYAATTT Consensus sequence (reverse complement motif): AAATTKTATTTAWT Alignment: -AAATTKTATTTAWT AATHATATWTHAAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 Motif 19 Original Motif Original Motif Backward 1 13 0.557158 Consensus sequence (original motif): TTCWTAGATTAWA Consensus sequence (reverse complement motif): TWTAATCTAWGAA Alignment: -TTCWTAGATTAWA AATHATATWTHAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 8 Motif 8 Original Motif Original Motif Forward 2 13 0.576389 Consensus sequence (original motif): AAATRWTAAAATCA Consensus sequence (reverse complement motif): TGATTTTAWKATTT Alignment: AAATRWTAAAATCA- -AATHATATWTHAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 41 wwAAATAATAtw Reverse Complement Original Motif Backward 1 12 1.03318 Consensus sequence (original motif): HDAAATAATADD Consensus sequence (reverse complement motif): DDTATTATTTDH Alignment: --HDAAATAATADD TTTDAWATATHATT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 37 tkAAATAATAtw Reverse Complement Original Motif Backward 1 12 1.03819 Consensus sequence (original motif): HDAAATAATAHW Consensus sequence (reverse complement motif): WHTATTATTTDH Alignment: --HDAAATAATAHW TTTDAWATATHATT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 16 Motif 16 Reverse Complement Reverse Complement Backward 3 12 1.05903 Consensus sequence (original motif): ACAAWTRATTTTGA Consensus sequence (reverse complement motif): TCAAAATKAWTTGT Alignment: --TCAAAATKAWTTGT TTTDAWATATHATT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 45 wbgTAAATAww Original Motif Reverse Complement Backward 1 11 1.54311 Consensus sequence (original motif): DBGTAAATAHD Consensus sequence (reverse complement motif): DHTATTTACBD Alignment: ---DHTATTTACBD AATHATATWTHAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 4 Motif 4 Reverse Complement Original Motif Forward 1 11 1.54987 Consensus sequence (original motif): AAAAWTTRCWT Consensus sequence (reverse complement motif): AWGKAAWTTTT Alignment: AAAAWTTRCWT--- TTTDAWATATHATT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 10 Motif name: Motif 10 Consensus sequence (original motif): TTTCATAAWT Consensus sequence (reverse complement motif): AWTTATGAAA ************************************************************************ Best Matches for Motif ID 10 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 11 Motif 11 Reverse Complement Original Motif Forward 2 10 0.01875 Consensus sequence (original motif): ATTTWATGAAA Consensus sequence (reverse complement motif): TTTCATWAAAT Alignment: ATTTWATGAAA -AWTTATGAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 6 Motif 6 Reverse Complement Original Motif Forward 5 10 0.0375 Consensus sequence (original motif): AATTYDGAARTAWW Consensus sequence (reverse complement motif): WWTAKTTCDKAATT Alignment: AATTYDGAARTAWW ----AWTTATGAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 8 Motif 8 Original Motif Reverse Complement Forward 2 10 0.04375 Consensus sequence (original motif): AAATRWTAAAATCA Consensus sequence (reverse complement motif): TGATTTTAWKATTT Alignment: TGATTTTAWKATTT -TTTCATAAWT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 5 Motif 5 Reverse Complement Original Motif Backward 1 10 0.05625 Consensus sequence (original motif): AWTAAATAYAATTT Consensus sequence (reverse complement motif): AAATTKTATTTAWT Alignment: AWTAAATAYAATTT ----AWTTATGAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 17 Motif 17 Original Motif Reverse Complement Backward 1 10 0.05625 Consensus sequence (original motif): AAAAATGAAT Consensus sequence (reverse complement motif): ATTCATTTTT Alignment: ATTCATTTTT TTTCATAAWT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 9 Motif 9 Original Motif Reverse Complement Forward 5 10 0.0604166 Consensus sequence (original motif): AATHATATWTHAAA Consensus sequence (reverse complement motif): TTTDAWATATHATT Alignment: TTTDAWATATHATT ----TTTCATAAWT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 15 Motif 15 Original Motif Reverse Complement Forward 1 10 0.06875 Consensus sequence (original motif): ATMACAATAAAA Consensus sequence (reverse complement motif): TTTTATTGTYAT Alignment: TTTTATTGTYAT TTTCATAAWT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 3 Motif 3 Reverse Complement Original Motif Backward 1 10 0.0706731 Consensus sequence (original motif): AWAAAWTWAAASWA Consensus sequence (reverse complement motif): TWSTTTWAWTTTWT Alignment: AWAAAWTWAAASWA ----AWTTATGAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 Motif 18 Original Motif Original Motif Forward 1 10 0.08125 Consensus sequence (original motif): TTAGWTWATAA Consensus sequence (reverse complement motif): TTATWAWCTAA Alignment: TTAGWTWATAA TTTCATAAWT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 Motif 19 Original Motif Reverse Complement Backward 4 10 0.08125 Consensus sequence (original motif): TTCWTAGATTAWA Consensus sequence (reverse complement motif): TWTAATCTAWGAA Alignment: TWTAATCTAWGAA TTTCATAAWT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 11 Motif name: Motif 11 Consensus sequence (original motif): ATTTWATGAAA Consensus sequence (reverse complement motif): TTTCATWAAAT ************************************************************************ Best Matches for Motif ID 11 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 5 Motif 5 Reverse Complement Original Motif Forward 3 11 0.0795455 Consensus sequence (original motif): AWTAAATAYAATTT Consensus sequence (reverse complement motif): AAATTKTATTTAWT Alignment: AWTAAATAYAATTT --TTTCATWAAAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 8 Motif 8 Reverse Complement Original Motif Backward 2 11 0.0795455 Consensus sequence (original motif): AAATRWTAAAATCA Consensus sequence (reverse complement motif): TGATTTTAWKATTT Alignment: AAATRWTAAAATCA --TTTCATWAAAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 Motif 18 Original Motif Reverse Complement Backward 1 11 0.102273 Consensus sequence (original motif): TTAGWTWATAA Consensus sequence (reverse complement motif): TTATWAWCTAA Alignment: TTATWAWCTAA ATTTWATGAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 15 Motif 15 Original Motif Reverse Complement Forward 1 11 0.102273 Consensus sequence (original motif): ATMACAATAAAA Consensus sequence (reverse complement motif): TTTTATTGTYAT Alignment: TTTTATTGTYAT ATTTWATGAAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 9 Motif 9 Original Motif Original Motif Backward 1 11 0.109848 Consensus sequence (original motif): AATHATATWTHAAA Consensus sequence (reverse complement motif): TTTDAWATATHATT Alignment: AATHATATWTHAAA ---ATTTWATGAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 Motif 19 Original Motif Original Motif Backward 1 11 0.113636 Consensus sequence (original motif): TTCWTAGATTAWA Consensus sequence (reverse complement motif): TWTAATCTAWGAA Alignment: TTCWTAGATTAWA --ATTTWATGAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 6 Motif 6 Original Motif Original Motif Forward 2 11 0.113636 Consensus sequence (original motif): AATTYDGAARTAWW Consensus sequence (reverse complement motif): WWTAKTTCDKAATT Alignment: AATTYDGAARTAWW -ATTTWATGAAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 3 Motif 3 Reverse Complement Reverse Complement Backward 1 11 0.113636 Consensus sequence (original motif): AWAAAWTWAAASWA Consensus sequence (reverse complement motif): TWSTTTWAWTTTWT Alignment: TWSTTTWAWTTTWT ---TTTCATWAAAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 41 wwAAATAATAtw Reverse Complement Original Motif Backward 2 11 0.123737 Consensus sequence (original motif): HDAAATAATADD Consensus sequence (reverse complement motif): DDTATTATTTDH Alignment: HDAAATAATADD TTTCATWAAAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 10 Motif 10 Reverse Complement Original Motif Backward 1 10 0.55 Consensus sequence (original motif): TTTCATAAWT Consensus sequence (reverse complement motif): AWTTATGAAA Alignment: -TTTCATAAWT TTTCATWAAAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 12 Motif name: Motif 12 Consensus sequence (original motif): AAAACAAA Consensus sequence (reverse complement motif): TTTGTTTT ************************************************************************ Best Matches for Motif ID 12 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 15 Motif 15 Original Motif Original Motif Forward 4 8 0.0625 Consensus sequence (original motif): ATMACAATAAAA Consensus sequence (reverse complement motif): TTTTATTGTYAT Alignment: ATMACAATAAAA ---AAAACAAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 17 Motif 17 Original Motif Original Motif Forward 2 8 0.0625 Consensus sequence (original motif): AAAAATGAAT Consensus sequence (reverse complement motif): ATTCATTTTT Alignment: AAAAATGAAT -AAAACAAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 5 Motif 5 Reverse Complement Reverse Complement Forward 3 8 0.078125 Consensus sequence (original motif): AWTAAATAYAATTT Consensus sequence (reverse complement motif): AAATTKTATTTAWT Alignment: AAATTKTATTTAWT --TTTGTTTT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 16 Motif 16 Reverse Complement Original Motif Forward 5 8 0.078125 Consensus sequence (original motif): ACAAWTRATTTTGA Consensus sequence (reverse complement motif): TCAAAATKAWTTGT Alignment: ACAAWTRATTTTGA ----TTTGTTTT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 14 Motif 14 Original Motif Original Motif Forward 1 8 0.078125 Consensus sequence (original motif): AWAAATAA Consensus sequence (reverse complement motif): TTATTTWT Alignment: AWAAATAA AAAACAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 3 Motif 3 Original Motif Original Motif Forward 3 8 0.0805288 Consensus sequence (original motif): AWAAAWTWAAASWA Consensus sequence (reverse complement motif): TWSTTTWAWTTTWT Alignment: AWAAAWTWAAASWA --AAAACAAA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 Motif 18 Reverse Complement Original Motif Backward 4 8 0.09375 Consensus sequence (original motif): TTAGWTWATAA Consensus sequence (reverse complement motif): TTATWAWCTAA Alignment: TTAGWTWATAA TTTGTTTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 8 Motif 8 Original Motif Original Motif Forward 3 8 0.09375 Consensus sequence (original motif): AAATRWTAAAATCA Consensus sequence (reverse complement motif): TGATTTTAWKATTT Alignment: AAATRWTAAAATCA --AAAACAAA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 6 Motif 6 Reverse Complement Reverse Complement Forward 2 8 0.101562 Consensus sequence (original motif): AATTYDGAARTAWW Consensus sequence (reverse complement motif): WWTAKTTCDKAATT Alignment: WWTAKTTCDKAATT -TTTGTTTT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 4 Motif 4 Original Motif Original Motif Backward 4 8 0.103618 Consensus sequence (original motif): AAAAWTTRCWT Consensus sequence (reverse complement motif): AWGKAAWTTTT Alignment: AAAAWTTRCWT AAAACAAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 13 Motif name: Motif 13 Consensus sequence (original motif): AAAGATTT Consensus sequence (reverse complement motif): AAATCTTT ************************************************************************ Best Matches for Motif ID 13 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 Motif 20 Original Motif Original Motif Forward 4 8 0 Consensus sequence (original motif): TTMAAAGATTT Consensus sequence (reverse complement motif): AAATCTTTYAA Alignment: TTMAAAGATTT ---AAAGATTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 16 Motif 16 Original Motif Original Motif Backward 4 8 0.0625 Consensus sequence (original motif): ACAAWTRATTTTGA Consensus sequence (reverse complement motif): TCAAAATKAWTTGT Alignment: ACAAWTRATTTTGA ---AAAGATTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 8 Motif 8 Reverse Complement Original Motif Forward 7 8 0.0625 Consensus sequence (original motif): AAATRWTAAAATCA Consensus sequence (reverse complement motif): TGATTTTAWKATTT Alignment: AAATRWTAAAATCA ------AAATCTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 Motif 19 Original Motif Original Motif Backward 3 8 0.078125 Consensus sequence (original motif): TTCWTAGATTAWA Consensus sequence (reverse complement motif): TWTAATCTAWGAA Alignment: TTCWTAGATTAWA ---AAAGATTT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 5 Motif 5 Reverse Complement Reverse Complement Backward 7 8 0.078125 Consensus sequence (original motif): AWTAAATAYAATTT Consensus sequence (reverse complement motif): AAATTKTATTTAWT Alignment: AAATTKTATTTAWT AAATCTTT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 4 Motif 4 Reverse Complement Reverse Complement Forward 4 8 0.0822369 Consensus sequence (original motif): AAAAWTTRCWT Consensus sequence (reverse complement motif): AWGKAAWTTTT Alignment: AWGKAAWTTTT ---AAATCTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 17 Motif 17 Original Motif Original Motif Forward 1 8 0.09375 Consensus sequence (original motif): AAAAATGAAT Consensus sequence (reverse complement motif): ATTCATTTTT Alignment: AAAAATGAAT AAAGATTT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 44 dhACATTCTkh Reverse Complement Reverse Complement Forward 4 8 0.104167 Consensus sequence (original motif): DHACATTCTGH Consensus sequence (reverse complement motif): HCAGAATGTHD Alignment: HCAGAATGTHD ---AAATCTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 14 Motif 14 Original Motif Original Motif Backward 1 8 0.109375 Consensus sequence (original motif): AWAAATAA Consensus sequence (reverse complement motif): TTATTTWT Alignment: AWAAATAA AAAGATTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 37 tkAAATAATAtw Reverse Complement Original Motif Forward 3 8 0.110417 Consensus sequence (original motif): HDAAATAATAHW Consensus sequence (reverse complement motif): WHTATTATTTDH Alignment: HDAAATAATAHW --AAATCTTT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 14 Motif name: Motif 14 Consensus sequence (original motif): AWAAATAA Consensus sequence (reverse complement motif): TTATTTWT ************************************************************************ Best Matches for Motif ID 14 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 17 Motif 17 Reverse Complement Reverse Complement Forward 3 8 0.046875 Consensus sequence (original motif): AAAAATGAAT Consensus sequence (reverse complement motif): ATTCATTTTT Alignment: ATTCATTTTT --TTATTTWT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 5 Motif 5 Reverse Complement Reverse Complement Backward 2 8 0.046875 Consensus sequence (original motif): AWTAAATAYAATTT Consensus sequence (reverse complement motif): AAATTKTATTTAWT Alignment: AAATTKTATTTAWT -----TTATTTWT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 15 Motif 15 Original Motif Original Motif Forward 3 8 0.0625 Consensus sequence (original motif): ATMACAATAAAA Consensus sequence (reverse complement motif): TTTTATTGTYAT Alignment: ATMACAATAAAA --AWAAATAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 16 Motif 16 Reverse Complement Reverse Complement Backward 1 8 0.0625 Consensus sequence (original motif): ACAAWTRATTTTGA Consensus sequence (reverse complement motif): TCAAAATKAWTTGT Alignment: TCAAAATKAWTTGT ------TTATTTWT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 41 wwAAATAATAtw Reverse Complement Reverse Complement Forward 5 8 0.0636574 Consensus sequence (original motif): HDAAATAATADD Consensus sequence (reverse complement motif): DDTATTATTTDH Alignment: DDTATTATTTDH ----TTATTTWT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 37 tkAAATAATAtw Reverse Complement Reverse Complement Forward 5 8 0.0697917 Consensus sequence (original motif): HDAAATAATAHW Consensus sequence (reverse complement motif): WHTATTATTTDH Alignment: WHTATTATTTDH ----TTATTTWT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 8 Motif 8 Reverse Complement Reverse Complement Forward 1 8 0.078125 Consensus sequence (original motif): AAATRWTAAAATCA Consensus sequence (reverse complement motif): TGATTTTAWKATTT Alignment: TGATTTTAWKATTT TTATTTWT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 Motif 18 Reverse Complement Original Motif Forward 1 8 0.078125 Consensus sequence (original motif): TTAGWTWATAA Consensus sequence (reverse complement motif): TTATWAWCTAA Alignment: TTAGWTWATAA TTATTTWT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 12 Motif 12 Original Motif Original Motif Forward 1 8 0.078125 Consensus sequence (original motif): AAAACAAA Consensus sequence (reverse complement motif): TTTGTTTT Alignment: AAAACAAA AWAAATAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 45 wbgTAAATAww Original Motif Original Motif Backward 2 8 0.0825893 Consensus sequence (original motif): DBGTAAATAHD Consensus sequence (reverse complement motif): DHTATTTACBD Alignment: DBGTAAATAHD --AWAAATAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 15 Motif name: Motif 15 Consensus sequence (original motif): ATMACAATAAAA Consensus sequence (reverse complement motif): TTTTATTGTYAT ************************************************************************ Best Matches for Motif ID 15 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 8 Motif 8 Reverse Complement Reverse Complement Backward 3 12 0.104167 Consensus sequence (original motif): AAATRWTAAAATCA Consensus sequence (reverse complement motif): TGATTTTAWKATTT Alignment: TGATTTTAWKATTT TTTTATTGTYAT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 5 Motif 5 Original Motif Original Motif Backward 2 12 0.114583 Consensus sequence (original motif): AWTAAATAYAATTT Consensus sequence (reverse complement motif): AAATTKTATTTAWT Alignment: AWTAAATAYAATTT -ATMACAATAAAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 3 Motif 3 Original Motif Original Motif Forward 1 12 0.114583 Consensus sequence (original motif): AWAAAWTWAAASWA Consensus sequence (reverse complement motif): TWSTTTWAWTTTWT Alignment: AWAAAWTWAAASWA ATMACAATAAAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 6 Motif 6 Original Motif Original Motif Backward 1 12 0.119792 Consensus sequence (original motif): AATTYDGAARTAWW Consensus sequence (reverse complement motif): WWTAKTTCDKAATT Alignment: AATTYDGAARTAWW --ATMACAATAAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 9 Motif 9 Original Motif Original Motif Forward 2 12 0.121528 Consensus sequence (original motif): AATHATATWTHAAA Consensus sequence (reverse complement motif): TTTDAWATATHATT Alignment: AATHATATWTHAAA -ATMACAATAAAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 16 Motif 16 Original Motif Reverse Complement Backward 4 11 0.590909 Consensus sequence (original motif): ACAAWTRATTTTGA Consensus sequence (reverse complement motif): TCAAAATKAWTTGT Alignment: -TCAAAATKAWTTGT ATMACAATAAAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 11 Motif 11 Reverse Complement Original Motif Backward 1 11 0.602273 Consensus sequence (original motif): ATTTWATGAAA Consensus sequence (reverse complement motif): TTTCATWAAAT Alignment: -ATTTWATGAAA TTTTATTGTYAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 Motif 19 Reverse Complement Reverse Complement Backward 3 11 0.613636 Consensus sequence (original motif): TTCWTAGATTAWA Consensus sequence (reverse complement motif): TWTAATCTAWGAA Alignment: -TWTAATCTAWGAA TTTTATTGTYAT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 Motif 18 Reverse Complement Original Motif Forward 1 11 0.613636 Consensus sequence (original motif): TTAGWTWATAA Consensus sequence (reverse complement motif): TTATWAWCTAA Alignment: TTAGWTWATAA- TTTTATTGTYAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 37 tkAAATAATAtw Reverse Complement Reverse Complement Backward 2 11 0.613636 Consensus sequence (original motif): HDAAATAATAHW Consensus sequence (reverse complement motif): WHTATTATTTDH Alignment: -WHTATTATTTDH TTTTATTGTYAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 16 Motif name: Motif 16 Consensus sequence (original motif): ACAAWTRATTTTGA Consensus sequence (reverse complement motif): TCAAAATKAWTTGT ************************************************************************ Best Matches for Motif ID 16 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 5 Motif 5 Reverse Complement Original Motif Forward 1 14 0.1 Consensus sequence (original motif): AWTAAATAYAATTT Consensus sequence (reverse complement motif): AAATTKTATTTAWT Alignment: AWTAAATAYAATTT TCAAAATKAWTTGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 9 Motif 9 Original Motif Original Motif Backward 3 12 1.08264 Consensus sequence (original motif): AATHATATWTHAAA Consensus sequence (reverse complement motif): TTTDAWATATHATT Alignment: --AATHATATWTHAAA ACAAWTRATTTTGA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 37 tkAAATAATAtw Reverse Complement Reverse Complement Backward 1 12 1.08403 Consensus sequence (original motif): HDAAATAATAHW Consensus sequence (reverse complement motif): WHTATTATTTDH Alignment: --WHTATTATTTDH TCAAAATKAWTTGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 41 wwAAATAATAtw Reverse Complement Reverse Complement Backward 1 12 1.08881 Consensus sequence (original motif): HDAAATAATADD Consensus sequence (reverse complement motif): DDTATTATTTDH Alignment: --DDTATTATTTDH TCAAAATKAWTTGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 8 Motif 8 Original Motif Original Motif Backward 3 12 1.1 Consensus sequence (original motif): AAATRWTAAAATCA Consensus sequence (reverse complement motif): TGATTTTAWKATTT Alignment: --AAATRWTAAAATCA ACAAWTRATTTTGA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 15 Motif 15 Original Motif Reverse Complement Forward 2 11 1.56591 Consensus sequence (original motif): ATMACAATAAAA Consensus sequence (reverse complement motif): TTTTATTGTYAT Alignment: TTTTATTGTYAT--- -ACAAWTRATTTTGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 6 Motif 6 Reverse Complement Original Motif Backward 4 11 1.56875 Consensus sequence (original motif): AATTYDGAARTAWW Consensus sequence (reverse complement motif): WWTAKTTCDKAATT Alignment: ---AATTYDGAARTAWW TCAAAATKAWTTGT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 4 Motif 4 Original Motif Original Motif Forward 1 11 1.57667 Consensus sequence (original motif): AAAAWTTRCWT Consensus sequence (reverse complement motif): AWGKAAWTTTT Alignment: AAAAWTTRCWT--- ACAAWTRATTTTGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 Motif 20 Original Motif Original Motif Forward 1 11 1.57727 Consensus sequence (original motif): TTMAAAGATTT Consensus sequence (reverse complement motif): AAATCTTTYAA Alignment: TTMAAAGATTT--- ACAAWTRATTTTGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 44 dhACATTCTkh Reverse Complement Reverse Complement Forward 1 11 1.57727 Consensus sequence (original motif): DHACATTCTGH Consensus sequence (reverse complement motif): HCAGAATGTHD Alignment: HCAGAATGTHD--- TCAAAATKAWTTGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 17 Motif name: Motif 17 Consensus sequence (original motif): AAAAATGAAT Consensus sequence (reverse complement motif): ATTCATTTTT ************************************************************************ Best Matches for Motif ID 17 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 16 Motif 16 Reverse Complement Original Motif Forward 2 10 0.05 Consensus sequence (original motif): ACAAWTRATTTTGA Consensus sequence (reverse complement motif): TCAAAATKAWTTGT Alignment: ACAAWTRATTTTGA -ATTCATTTTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 15 Motif 15 Original Motif Original Motif Backward 1 10 0.0875 Consensus sequence (original motif): ATMACAATAAAA Consensus sequence (reverse complement motif): TTTTATTGTYAT Alignment: ATMACAATAAAA --AAAAATGAAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 10 Motif 10 Original Motif Reverse Complement Forward 1 10 0.0875 Consensus sequence (original motif): TTTCATAAWT Consensus sequence (reverse complement motif): AWTTATGAAA Alignment: AWTTATGAAA AAAAATGAAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 5 Motif 5 Original Motif Original Motif Backward 2 10 0.0875 Consensus sequence (original motif): AWTAAATAYAATTT Consensus sequence (reverse complement motif): AAATTKTATTTAWT Alignment: AWTAAATAYAATTT ---AAAAATGAAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 4 Motif 4 Reverse Complement Reverse Complement Forward 2 10 0.0947369 Consensus sequence (original motif): AAAAWTTRCWT Consensus sequence (reverse complement motif): AWGKAAWTTTT Alignment: AWGKAAWTTTT -ATTCATTTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 44 dhACATTCTkh Reverse Complement Original Motif Forward 1 10 0.1 Consensus sequence (original motif): DHACATTCTGH Consensus sequence (reverse complement motif): HCAGAATGTHD Alignment: DHACATTCTGH ATTCATTTTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 8 Motif 8 Reverse Complement Reverse Complement Forward 4 10 0.1 Consensus sequence (original motif): AAATRWTAAAATCA Consensus sequence (reverse complement motif): TGATTTTAWKATTT Alignment: TGATTTTAWKATTT ---ATTCATTTTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 3 Motif 3 Reverse Complement Reverse Complement Backward 1 10 0.104808 Consensus sequence (original motif): AWAAAWTWAAASWA Consensus sequence (reverse complement motif): TWSTTTWAWTTTWT Alignment: TWSTTTWAWTTTWT ----ATTCATTTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 9 Motif 9 Original Motif Reverse Complement Forward 1 10 0.10625 Consensus sequence (original motif): AATHATATWTHAAA Consensus sequence (reverse complement motif): TTTDAWATATHATT Alignment: TTTDAWATATHATT AAAAATGAAT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 Motif 20 Reverse Complement Reverse Complement Backward 1 10 0.1125 Consensus sequence (original motif): TTMAAAGATTT Consensus sequence (reverse complement motif): AAATCTTTYAA Alignment: AAATCTTTYAA -ATTCATTTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 18 Motif name: Motif 18 Consensus sequence (original motif): TTAGWTWATAA Consensus sequence (reverse complement motif): TTATWAWCTAA ************************************************************************ Best Matches for Motif ID 18 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 6 Motif 6 Reverse Complement Original Motif Forward 2 11 0.09375 Consensus sequence (original motif): AATTYDGAARTAWW Consensus sequence (reverse complement motif): WWTAKTTCDKAATT Alignment: AATTYDGAARTAWW -TTATWAWCTAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 8 Motif 8 Reverse Complement Original Motif Forward 1 11 0.102273 Consensus sequence (original motif): AAATRWTAAAATCA Consensus sequence (reverse complement motif): TGATTTTAWKATTT Alignment: AAATRWTAAAATCA TTATWAWCTAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 11 Motif 11 Original Motif Reverse Complement Backward 1 11 0.102273 Consensus sequence (original motif): ATTTWATGAAA Consensus sequence (reverse complement motif): TTTCATWAAAT Alignment: TTTCATWAAAT TTAGWTWATAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 37 tkAAATAATAtw Reverse Complement Reverse Complement Forward 2 11 0.102273 Consensus sequence (original motif): HDAAATAATAHW Consensus sequence (reverse complement motif): WHTATTATTTDH Alignment: WHTATTATTTDH -TTATWAWCTAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 41 wwAAATAATAtw Reverse Complement Reverse Complement Forward 2 11 0.104798 Consensus sequence (original motif): HDAAATAATADD Consensus sequence (reverse complement motif): DDTATTATTTDH Alignment: DDTATTATTTDH -TTATWAWCTAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 9 Motif 9 Original Motif Reverse Complement Forward 2 11 0.109848 Consensus sequence (original motif): AATHATATWTHAAA Consensus sequence (reverse complement motif): TTTDAWATATHATT Alignment: TTTDAWATATHATT -TTAGWTWATAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 Motif 19 Original Motif Reverse Complement Backward 1 11 0.113636 Consensus sequence (original motif): TTCWTAGATTAWA Consensus sequence (reverse complement motif): TWTAATCTAWGAA Alignment: TWTAATCTAWGAA --TTAGWTWATAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 15 Motif 15 Original Motif Original Motif Backward 1 11 0.113636 Consensus sequence (original motif): ATMACAATAAAA Consensus sequence (reverse complement motif): TTTTATTGTYAT Alignment: ATMACAATAAAA -TTAGWTWATAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 5 Motif 5 Reverse Complement Reverse Complement Backward 2 11 0.113636 Consensus sequence (original motif): AWTAAATAYAATTT Consensus sequence (reverse complement motif): AAATTKTATTTAWT Alignment: AAATTKTATTTAWT --TTATWAWCTAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 3 Motif 3 Original Motif Original Motif Backward 3 11 0.118881 Consensus sequence (original motif): AWAAAWTWAAASWA Consensus sequence (reverse complement motif): TWSTTTWAWTTTWT Alignment: AWAAAWTWAAASWA -TTAGWTWATAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 19 Motif name: Motif 19 Consensus sequence (original motif): TTCWTAGATTAWA Consensus sequence (reverse complement motif): TWTAATCTAWGAA ************************************************************************ Best Matches for Motif ID 19 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 9 Motif 9 Original Motif Original Motif Forward 2 13 0.0641025 Consensus sequence (original motif): AATHATATWTHAAA Consensus sequence (reverse complement motif): TTTDAWATATHATT Alignment: AATHATATWTHAAA -TTCWTAGATTAWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 6 Motif 6 Original Motif Original Motif Forward 3 12 0.5625 Consensus sequence (original motif): AATTYDGAARTAWW Consensus sequence (reverse complement motif): WWTAKTTCDKAATT Alignment: AATTYDGAARTAWW- --TTCWTAGATTAWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 8 Motif 8 Reverse Complement Reverse Complement Backward 3 12 0.5625 Consensus sequence (original motif): AAATRWTAAAATCA Consensus sequence (reverse complement motif): TGATTTTAWKATTT Alignment: -TGATTTTAWKATTT TWTAATCTAWGAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 37 tkAAATAATAtw Reverse Complement Reverse Complement Forward 1 12 0.577083 Consensus sequence (original motif): HDAAATAATAHW Consensus sequence (reverse complement motif): WHTATTATTTDH Alignment: WHTATTATTTDH- TWTAATCTAWGAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 41 wwAAATAATAtw Reverse Complement Reverse Complement Forward 1 12 0.58179 Consensus sequence (original motif): HDAAATAATADD Consensus sequence (reverse complement motif): DDTATTATTTDH Alignment: DDTATTATTTDH- TWTAATCTAWGAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 5 Motif 5 Original Motif Original Motif Forward 3 12 0.583333 Consensus sequence (original motif): AWTAAATAYAATTT Consensus sequence (reverse complement motif): AAATTKTATTTAWT Alignment: AWTAAATAYAATTT- --TTCWTAGATTAWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 Motif 20 Original Motif Original Motif Forward 1 11 1.02652 Consensus sequence (original motif): TTMAAAGATTT Consensus sequence (reverse complement motif): AAATCTTTYAA Alignment: TTMAAAGATTT-- TTCWTAGATTAWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 11 Motif 11 Reverse Complement Reverse Complement Forward 1 11 1.07197 Consensus sequence (original motif): ATTTWATGAAA Consensus sequence (reverse complement motif): TTTCATWAAAT Alignment: TTTCATWAAAT-- TWTAATCTAWGAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 Motif 18 Original Motif Reverse Complement Backward 1 11 1.07197 Consensus sequence (original motif): TTAGWTWATAA Consensus sequence (reverse complement motif): TTATWAWCTAA Alignment: --TTATWAWCTAA TTCWTAGATTAWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 15 Motif 15 Original Motif Original Motif Backward 2 11 1.07197 Consensus sequence (original motif): ATMACAATAAAA Consensus sequence (reverse complement motif): TTTTATTGTYAT Alignment: --ATMACAATAAAA TTCWTAGATTAWA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 20 Motif name: Motif 20 Consensus sequence (original motif): TTMAAAGATTT Consensus sequence (reverse complement motif): AAATCTTTYAA ************************************************************************ Best Matches for Motif ID 20 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 Motif 19 Original Motif Original Motif Backward 3 11 0.0681818 Consensus sequence (original motif): TTCWTAGATTAWA Consensus sequence (reverse complement motif): TWTAATCTAWGAA Alignment: TTCWTAGATTAWA TTMAAAGATTT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 8 Motif 8 Reverse Complement Original Motif Forward 4 11 0.0681818 Consensus sequence (original motif): AAATRWTAAAATCA Consensus sequence (reverse complement motif): TGATTTTAWKATTT Alignment: AAATRWTAAAATCA ---AAATCTTTYAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 16 Motif 16 Reverse Complement Original Motif Forward 2 11 0.102273 Consensus sequence (original motif): ACAAWTRATTTTGA Consensus sequence (reverse complement motif): TCAAAATKAWTTGT Alignment: ACAAWTRATTTTGA -AAATCTTTYAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 5 Motif 5 Reverse Complement Reverse Complement Backward 3 11 0.102273 Consensus sequence (original motif): AWTAAATAYAATTT Consensus sequence (reverse complement motif): AAATTKTATTTAWT Alignment: AAATTKTATTTAWT -AAATCTTTYAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 9 Motif 9 Original Motif Reverse Complement Backward 2 11 0.106061 Consensus sequence (original motif): AATHATATWTHAAA Consensus sequence (reverse complement motif): TTTDAWATATHATT Alignment: TTTDAWATATHATT --TTMAAAGATTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 4 Motif 4 Original Motif Reverse Complement Backward 1 11 0.110646 Consensus sequence (original motif): AAAAWTTRCWT Consensus sequence (reverse complement motif): AWGKAAWTTTT Alignment: AWGKAAWTTTT TTMAAAGATTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 37 tkAAATAATAtw Reverse Complement Reverse Complement Backward 1 11 0.124242 Consensus sequence (original motif): HDAAATAATAHW Consensus sequence (reverse complement motif): WHTATTATTTDH Alignment: WHTATTATTTDH -AAATCTTTYAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 15 Motif 15 Reverse Complement Original Motif Backward 1 11 0.125 Consensus sequence (original motif): ATMACAATAAAA Consensus sequence (reverse complement motif): TTTTATTGTYAT Alignment: ATMACAATAAAA -AAATCTTTYAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 6 Motif 6 Reverse Complement Reverse Complement Backward 3 11 0.125 Consensus sequence (original motif): AATTYDGAARTAWW Consensus sequence (reverse complement motif): WWTAKTTCDKAATT Alignment: WWTAKTTCDKAATT -AAATCTTTYAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 11 Motif 11 Reverse Complement Original Motif Forward 2 10 0.6 Consensus sequence (original motif): ATTTWATGAAA Consensus sequence (reverse complement motif): TTTCATWAAAT Alignment: ATTTWATGAAA- -AAATCTTTYAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 21 Motif name: Motif 21 Consensus sequence (original motif): ATAAAA Consensus sequence (reverse complement motif): TTTTAT ************************************************************************ Best Matches for Motif ID 21 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 15 Motif 15 Reverse Complement Reverse Complement Forward 1 6 0 Consensus sequence (original motif): ATMACAATAAAA Consensus sequence (reverse complement motif): TTTTATTGTYAT Alignment: TTTTATTGTYAT TTTTAT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 5 Motif 5 Reverse Complement Reverse Complement Forward 4 6 0.0208333 Consensus sequence (original motif): AWTAAATAYAATTT Consensus sequence (reverse complement motif): AAATTKTATTTAWT Alignment: AAATTKTATTTAWT ---TTTTAT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 11 Motif 11 Original Motif Reverse Complement Backward 5 6 0.0208333 Consensus sequence (original motif): ATTTWATGAAA Consensus sequence (reverse complement motif): TTTCATWAAAT Alignment: TTTCATWAAAT -ATAAAA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 8 Motif 8 Reverse Complement Reverse Complement Forward 4 6 0.0208333 Consensus sequence (original motif): AAATRWTAAAATCA Consensus sequence (reverse complement motif): TGATTTTAWKATTT Alignment: TGATTTTAWKATTT ---TTTTAT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 10 Motif 10 Reverse Complement Original Motif Forward 5 6 0.0416667 Consensus sequence (original motif): TTTCATAAWT Consensus sequence (reverse complement motif): AWTTATGAAA Alignment: TTTCATAAWT ----TTTTAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 Motif 19 Reverse Complement Reverse Complement Forward 1 6 0.0625 Consensus sequence (original motif): TTCWTAGATTAWA Consensus sequence (reverse complement motif): TWTAATCTAWGAA Alignment: TWTAATCTAWGAA TTTTAT------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 14 Motif 14 Reverse Complement Reverse Complement Backward 1 6 0.0625 Consensus sequence (original motif): AWAAATAA Consensus sequence (reverse complement motif): TTATTTWT Alignment: TTATTTWT --TTTTAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 Motif 20 Reverse Complement Reverse Complement Backward 1 6 0.0625 Consensus sequence (original motif): TTMAAAGATTT Consensus sequence (reverse complement motif): AAATCTTTYAA Alignment: AAATCTTTYAA -----TTTTAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 41 wwAAATAATAtw Reverse Complement Reverse Complement Forward 3 6 0.0632716 Consensus sequence (original motif): HDAAATAATADD Consensus sequence (reverse complement motif): DDTATTATTTDH Alignment: DDTATTATTTDH --TTTTAT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 3 Motif 3 Reverse Complement Reverse Complement Forward 4 6 0.0689103 Consensus sequence (original motif): AWAAAWTWAAASWA Consensus sequence (reverse complement motif): TWSTTTWAWTTTWT Alignment: TWSTTTWAWTTTWT ---TTTTAT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 22 Motif name: Zfx Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB ************************************************************************ Best Matches for Motif ID 22 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 46 Zfx Original Motif Original Motif Forward 1 14 0 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV BBVGCCBVGGCCTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 38 cccGCCCCGCCCCsb Original Motif Original Motif Forward 1 14 0.089972 Consensus sequence (original motif): BCCGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCGGB Alignment: BCCGCCCCGCCCCBB BBVGCCBVGGCCTV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 55 Pax5 Original Motif Original Motif Backward 5 14 0.0996894 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR --BBVGCCBVGGCCTV---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 31 Pax5 Original Motif Original Motif Backward 5 14 0.0996894 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR --BBVGCCBVGGCCTV---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 36 csGCCCCGCCCCsc Reverse Complement Original Motif Forward 1 14 0.104023 Consensus sequence (original motif): HVGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCVD Alignment: HVGCCCCGCCCCBB VAGGCCBBGGCVBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 30 PLAG1 Original Motif Reverse Complement Forward 1 14 0.118259 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: CCCCCTTGGGCCCC BBVGCCBVGGCCTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 54 PLAG1 Original Motif Reverse Complement Forward 1 14 0.118259 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: CCCCCTTGGGCCCC BBVGCCBVGGCCTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 7 Motif 7 Original Motif Reverse Complement Forward 1 14 0.118483 Consensus sequence (original motif): CSKCCCCGCCCCSY Consensus sequence (reverse complement motif): MSGGGGCGGGGYSG Alignment: MSGGGGCGGGGYSG BBVGCCBVGGCCTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 59 GABPA Reverse Complement Original Motif Forward 1 11 1.6145 Consensus sequence (original motif): CCGGAAGTGVV Consensus sequence (reverse complement motif): VVCACTTCCGG Alignment: CCGGAAGTGVV--- VAGGCCBBGGCVBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 GABPA Reverse Complement Original Motif Forward 1 11 1.6145 Consensus sequence (original motif): CCGGAAGTGVV Consensus sequence (reverse complement motif): VVCACTTCCGG Alignment: CCGGAAGTGVV--- VAGGCCBBGGCVBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 23 Motif name: Egr1 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH ************************************************************************ Best Matches for Motif ID 23 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 47 Egr1 Original Motif Original Motif Forward 1 11 0 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: HGCGTGGGCGK HGCGTGGGCGK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 38 cccGCCCCGCCCCsb Reverse Complement Original Motif Backward 5 11 0.107124 Consensus sequence (original motif): BCCGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCGGB Alignment: BCCGCCCCGCCCCBB YCGCCCACGCH---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 22 Zfx Original Motif Original Motif Backward 2 11 0.110516 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV --HGCGTGGGCGK- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 46 Zfx Original Motif Original Motif Backward 2 11 0.110516 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV --HGCGTGGGCGK- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 55 Pax5 Original Motif Original Motif Backward 6 11 0.110606 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR ----HGCGTGGGCGK----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 31 Pax5 Original Motif Original Motif Forward 5 11 0.110606 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR ----HGCGTGGGCGK----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 7 Motif 7 Reverse Complement Original Motif Forward 2 11 0.111149 Consensus sequence (original motif): CSKCCCCGCCCCSY Consensus sequence (reverse complement motif): MSGGGGCGGGGYSG Alignment: CSKCCCCGCCCCSY -YCGCCCACGCH-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 36 csGCCCCGCCCCsc Reverse Complement Original Motif Forward 2 11 0.116531 Consensus sequence (original motif): HVGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCVD Alignment: HVGCCCCGCCCCBB -YCGCCCACGCH-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 24 SP1 Original Motif Reverse Complement Forward 1 10 0.606429 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: GGGGGYGGGG- HGCGTGGGCGK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 48 SP1 Original Motif Reverse Complement Forward 1 10 0.606429 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: GGGGGYGGGG- HGCGTGGGCGK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 24 Motif name: SP1 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG ************************************************************************ Best Matches for Motif ID 24 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 48 SP1 Original Motif Original Motif Forward 1 10 0 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: CCCCKCCCCC CCCCKCCCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 7 Motif 7 Original Motif Original Motif Forward 4 10 0.043504 Consensus sequence (original motif): CSKCCCCGCCCCSY Consensus sequence (reverse complement motif): MSGGGGCGGGGYSG Alignment: CSKCCCCGCCCCSY ---CCCCKCCCCC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 36 csGCCCCGCCCCsc Original Motif Original Motif Forward 4 10 0.0486461 Consensus sequence (original motif): HVGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCVD Alignment: HVGCCCCGCCCCBB ---CCCCKCCCCC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 38 cccGCCCCGCCCCsb Original Motif Original Motif Backward 2 10 0.0517173 Consensus sequence (original motif): BCCGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCGGB Alignment: BCCGCCCCGCCCCBB ----CCCCKCCCCC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 22 Zfx Reverse Complement Original Motif Forward 5 10 0.0930706 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV ----GGGGGYGGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 46 Zfx Original Motif Reverse Complement Backward 1 10 0.0930706 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: VAGGCCBBGGCVBB ----CCCCKCCCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 54 PLAG1 Original Motif Reverse Complement Forward 2 10 0.0990873 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: CCCCCTTGGGCCCC -CCCCKCCCCC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 30 PLAG1 Original Motif Reverse Complement Forward 2 10 0.0990873 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: CCCCCTTGGGCCCC -CCCCKCCCCC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 51 Klf4 Original Motif Reverse Complement Backward 1 10 0.102706 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: GCCYCMCCCD CCCCKCCCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 27 Klf4 Original Motif Reverse Complement Backward 1 10 0.102706 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: GCCYCMCCCD CCCCKCCCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 25 Motif name: TFAP2A Consensus sequence (original motif): GCCBBVRGS Consensus sequence (reverse complement motif): SCMVBBGGC ************************************************************************ Best Matches for Motif ID 25 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 49 TFAP2A Original Motif Original Motif Backward 1 9 0 Consensus sequence (original motif): GCCBBVRGS Consensus sequence (reverse complement motif): SCMVBBGGC Alignment: GCCBBVRGS GCCBBVRGS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 22 Zfx Reverse Complement Original Motif Backward 3 9 0.0516959 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV ---SCMVBBGGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 46 Zfx Original Motif Reverse Complement Backward 3 9 0.0516959 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: VAGGCCBBGGCVBB ---GCCBBVRGS-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 54 PLAG1 Original Motif Original Motif Forward 4 9 0.08003 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: GGGGCCCAAGGGGG ---GCCBBVRGS-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 30 PLAG1 Original Motif Original Motif Forward 4 9 0.08003 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: GGGGCCCAAGGGGG ---GCCBBVRGS-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 57 Mycn Reverse Complement Original Motif Forward 2 9 0.0936515 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: HSCACGTGGC -SCMVBBGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 33 Mycn Reverse Complement Original Motif Forward 2 9 0.0936515 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: HSCACGTGGC -SCMVBBGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 55 Pax5 Original Motif Reverse Complement Forward 8 9 0.0966967 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD -------GCCBBVRGS---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 31 Pax5 Original Motif Reverse Complement Forward 8 9 0.0966967 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD -------GCCBBVRGS---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 58 Myc Reverse Complement Original Motif Forward 2 9 0.0999167 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: VGCACGTGGH -SCMVBBGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 26 Motif name: MIZF Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV ************************************************************************ Best Matches for Motif ID 26 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 50 MIZF Original Motif Original Motif Forward 1 10 0 Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV Alignment: BAACGTCCGC BAACGTCCGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 59 GABPA Reverse Complement Original Motif Backward 2 10 0.0810799 Consensus sequence (original motif): CCGGAAGTGVV Consensus sequence (reverse complement motif): VVCACTTCCGG Alignment: CCGGAAGTGVV GCGGACGTTV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 GABPA Reverse Complement Original Motif Backward 2 10 0.0810799 Consensus sequence (original motif): CCGGAAGTGVV Consensus sequence (reverse complement motif): VVCACTTCCGG Alignment: CCGGAAGTGVV GCGGACGTTV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 40 kcACCTGCAgc Original Motif Original Motif Forward 1 10 0.112981 Consensus sequence (original motif): BCACCTGCABC Consensus sequence (reverse complement motif): GBTGCAGGTGB Alignment: BCACCTGCABC BAACGTCCGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 44 dhACATTCTkh Original Motif Original Motif Backward 2 10 0.114583 Consensus sequence (original motif): DHACATTCTGH Consensus sequence (reverse complement motif): HCAGAATGTHD Alignment: DHACATTCTGH BAACGTCCGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 42 sSGTCACGTGACSs Reverse Complement Reverse Complement Backward 4 10 0.115556 Consensus sequence (original motif): SGGTCACGTGACCS Consensus sequence (reverse complement motif): SGGTCACGTGACCS Alignment: SGGTCACGTGACCS -GCGGACGTTV--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 38 cccGCCCCGCCCCsb Original Motif Original Motif Forward 1 10 0.122872 Consensus sequence (original motif): BCCGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCGGB Alignment: BCCGCCCCGCCCCBB BAACGTCCGC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 31 Pax5 Reverse Complement Reverse Complement Backward 10 10 0.122917 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD -GCGGACGTTV--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 55 Pax5 Reverse Complement Reverse Complement Forward 2 10 0.122917 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD -GCGGACGTTV--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 36 csGCCCCGCCCCsc Original Motif Original Motif Forward 4 10 0.123601 Consensus sequence (original motif): HVGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCVD Alignment: HVGCCCCGCCCCBB ---BAACGTCCGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 27 Motif name: Klf4 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD ************************************************************************ Best Matches for Motif ID 27 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 51 Klf4 Original Motif Original Motif Forward 1 10 0 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: DGGGYGKGGC DGGGYGKGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 7 Motif 7 Reverse Complement Original Motif Forward 3 10 0.0516385 Consensus sequence (original motif): CSKCCCCGCCCCSY Consensus sequence (reverse complement motif): MSGGGGCGGGGYSG Alignment: CSKCCCCGCCCCSY --GCCYCMCCCD-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 36 csGCCCCGCCCCsc Original Motif Reverse Complement Backward 3 10 0.0524114 Consensus sequence (original motif): HVGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCVD Alignment: BBGGGGCGGGGCVD --DGGGYGKGGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 38 cccGCCCCGCCCCsb Original Motif Reverse Complement Forward 3 10 0.0558821 Consensus sequence (original motif): BCCGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCGGB Alignment: BBGGGGCGGGGCGGB --DGGGYGKGGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 46 Zfx Original Motif Reverse Complement Backward 4 10 0.0987519 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: VAGGCCBBGGCVBB -DGGGYGKGGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 22 Zfx Reverse Complement Original Motif Backward 4 10 0.0987519 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV -GCCYCMCCCD--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 24 SP1 Original Motif Reverse Complement Backward 1 10 0.102706 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: GGGGGYGGGG DGGGYGKGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 48 SP1 Reverse Complement Original Motif Backward 1 10 0.102706 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: CCCCKCCCCC GCCYCMCCCD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 Myc Original Motif Original Motif Forward 1 10 0.105078 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: VGCACGTGGH DGGGYGKGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 58 Myc Original Motif Original Motif Forward 1 10 0.105078 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: VGCACGTGGH DGGGYGKGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 28 Motif name: E2F1 Consensus sequence (original motif): TTTSGCGC Consensus sequence (reverse complement motif): GCGCSAAA ************************************************************************ Best Matches for Motif ID 28 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 52 E2F1 Original Motif Original Motif Forward 1 8 0 Consensus sequence (original motif): TTTSGCGC Consensus sequence (reverse complement motif): GCGCSAAA Alignment: TTTSGCGC TTTSGCGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 30 PLAG1 Reverse Complement Original Motif Forward 2 8 0.0982639 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: GGGGCCCAAGGGGG -GCGCSAAA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 54 PLAG1 Reverse Complement Original Motif Forward 2 8 0.0982639 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: GGGGCCCAAGGGGG -GCGCSAAA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 39 kCAGCCAATmr Reverse Complement Original Motif Backward 3 8 0.10386 Consensus sequence (original motif): DCAGCCAATVR Consensus sequence (reverse complement motif): MBATTGGCTGH Alignment: DCAGCCAATVR -GCGCSAAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 47 Egr1 Reverse Complement Reverse Complement Backward 4 8 0.119792 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: YCGCCCACGCH GCGCSAAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 23 Egr1 Reverse Complement Reverse Complement Backward 4 8 0.119792 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: YCGCCCACGCH GCGCSAAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 15 Motif 15 Reverse Complement Original Motif Forward 2 8 0.125 Consensus sequence (original motif): ATMACAATAAAA Consensus sequence (reverse complement motif): TTTTATTGTYAT Alignment: ATMACAATAAAA -GCGCSAAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 11 Motif 11 Original Motif Original Motif Forward 2 8 0.125 Consensus sequence (original motif): ATTTWATGAAA Consensus sequence (reverse complement motif): TTTCATWAAAT Alignment: ATTTWATGAAA -TTTSGCGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 38 cccGCCCCGCCCCsb Original Motif Reverse Complement Backward 9 7 0.612386 Consensus sequence (original motif): BCCGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCGGB Alignment: -BBGGGGCGGGGCGGB TTTSGCGC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 36 csGCCCCGCCCCsc Original Motif Reverse Complement Backward 8 7 0.616684 Consensus sequence (original motif): HVGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCVD Alignment: -BBGGGGCGGGGCVD TTTSGCGC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 29 Motif name: HIF1AARNT Consensus sequence (original motif): VBACGTGV Consensus sequence (reverse complement motif): VCACGTBV ************************************************************************ Best Matches for Motif ID 29 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 53 HIF1AARNT Original Motif Original Motif Backward 1 8 0 Consensus sequence (original motif): VBACGTGV Consensus sequence (reverse complement motif): VCACGTBV Alignment: VBACGTGV VBACGTGV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 57 Mycn Original Motif Reverse Complement Backward 2 8 0.0575825 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: GCCACGTGSD -VBACGTGV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 33 Mycn Original Motif Reverse Complement Backward 2 8 0.0575825 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: GCCACGTGSD -VBACGTGV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 58 Myc Original Motif Reverse Complement Forward 2 8 0.0597215 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: DCCACGTGCV -VBACGTGV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 Myc Original Motif Reverse Complement Forward 2 8 0.0597215 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: DCCACGTGCV -VBACGTGV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 40 kcACCTGCAgc Original Motif Original Motif Backward 4 8 0.0748197 Consensus sequence (original motif): BCACCTGCABC Consensus sequence (reverse complement motif): GBTGCAGGTGB Alignment: BCACCTGCABC VBACGTGV--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 42 sSGTCACGTGACSs Reverse Complement Original Motif Forward 4 8 0.0767561 Consensus sequence (original motif): SGGTCACGTGACCS Consensus sequence (reverse complement motif): SGGTCACGTGACCS Alignment: SGGTCACGTGACCS ---VCACGTBV--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 50 MIZF Reverse Complement Reverse Complement Forward 3 8 0.0829928 Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV Alignment: GCGGACGTTV --VCACGTBV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 26 MIZF Reverse Complement Reverse Complement Forward 3 8 0.0829928 Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV Alignment: GCGGACGTTV --VCACGTBV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 31 Pax5 Reverse Complement Reverse Complement Backward 8 8 0.100962 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD -----VCACGTBV------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 30 Motif name: PLAG1 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC ************************************************************************ Best Matches for Motif ID 30 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 54 PLAG1 Original Motif Original Motif Forward 1 14 0 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: GGGGCCCAAGGGGG GGGGCCCAAGGGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 22 Zfx Original Motif Reverse Complement Forward 1 14 0.118259 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: VAGGCCBBGGCVBB GGGGCCCAAGGGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 46 Zfx Reverse Complement Original Motif Forward 1 14 0.118259 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV CCCCCTTGGGCCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 38 cccGCCCCGCCCCsb Reverse Complement Original Motif Backward 2 14 0.120124 Consensus sequence (original motif): BCCGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCGGB Alignment: BCCGCCCCGCCCCBB CCCCCTTGGGCCCC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 31 Pax5 Original Motif Original Motif Forward 1 14 0.124008 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR GGGGCCCAAGGGGG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 55 Pax5 Original Motif Original Motif Forward 1 14 0.124008 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR GGGGCCCAAGGGGG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 7 Motif 7 Original Motif Reverse Complement Backward 2 13 0.617683 Consensus sequence (original motif): CSKCCCCGCCCCSY Consensus sequence (reverse complement motif): MSGGGGCGGGGYSG Alignment: -MSGGGGCGGGGYSG GGGGCCCAAGGGGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 36 csGCCCCGCCCCsc Reverse Complement Original Motif Backward 2 13 0.624856 Consensus sequence (original motif): HVGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCVD Alignment: -HVGCCCCGCCCCBB CCCCCTTGGGCCCC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 48 SP1 Reverse Complement Original Motif Backward 1 10 2.1077 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: ----CCCCKCCCCC CCCCCTTGGGCCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 24 SP1 Original Motif Reverse Complement Backward 1 10 2.1077 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: ----GGGGGYGGGG GGGGCCCAAGGGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 31 Motif name: Pax5 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD ************************************************************************ Best Matches for Motif ID 31 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 55 Pax5 Original Motif Original Motif Backward 1 20 0 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR DGVBCABTGDWGCGKRRCSR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 38 cccGCCCCGCCCCsb Reverse Complement Reverse Complement Forward 1 15 2.61478 Consensus sequence (original motif): BCCGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCGGB Alignment: BBGGGGCGGGGCGGB----- MSGKKRCGCWDCABTGBBCD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 36 csGCCCCGCCCCsc Original Motif Reverse Complement Backward 1 14 3.09024 Consensus sequence (original motif): HVGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCVD Alignment: ------BBGGGGCGGGGCVD DGVBCABTGDWGCGKRRCSR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 7 Motif 7 Reverse Complement Original Motif Backward 1 14 3.09355 Consensus sequence (original motif): CSKCCCCGCCCCSY Consensus sequence (reverse complement motif): MSGGGGCGGGGYSG Alignment: ------CSKCCCCGCCCCSY MSGKKRCGCWDCABTGBBCD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 2 Motif 2 Reverse Complement Reverse Complement Backward 1 14 3.09388 Consensus sequence (original motif): RGRAGARRGARRAR Consensus sequence (reverse complement motif): MTMMTCMMTCTKCK Alignment: ------MTMMTCMMTCTKCK MSGKKRCGCWDCABTGBBCD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 42 sSGTCACGTGACSs Original Motif Original Motif Backward 1 14 3.11062 Consensus sequence (original motif): SGGTCACGTGACCS Consensus sequence (reverse complement motif): SGGTCACGTGACCS Alignment: ------SGGTCACGTGACCS DGVBCABTGDWGCGKRRCSR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 30 PLAG1 Original Motif Original Motif Forward 1 14 3.12401 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: GGGGCCCAAGGGGG------ DGVBCABTGDWGCGKRRCSR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 54 PLAG1 Original Motif Original Motif Forward 1 14 3.12401 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: GGGGCCCAAGGGGG------ DGVBCABTGDWGCGKRRCSR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 22 Zfx Original Motif Reverse Complement Backward 2 13 3.6245 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: -------VAGGCCBBGGCVBB DGVBCABTGDWGCGKRRCSR- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 46 Zfx Reverse Complement Original Motif Backward 2 13 3.6245 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: -------BBVGCCBVGGCCTV MSGKKRCGCWDCABTGBBCD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 32 Motif name: ArntAhr Consensus sequence (original motif): YGCGTG Consensus sequence (reverse complement motif): CACGCM ************************************************************************ Best Matches for Motif ID 32 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 56 ArntAhr Original Motif Original Motif Backward 1 6 0 Consensus sequence (original motif): YGCGTG Consensus sequence (reverse complement motif): CACGCM Alignment: YGCGTG YGCGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 47 Egr1 Reverse Complement Reverse Complement Backward 1 6 0.0340278 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: YCGCCCACGCH -----CACGCM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 23 Egr1 Original Motif Original Motif Forward 1 6 0.0340278 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: HGCGTGGGCGK YGCGTG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 29 HIF1AARNT Original Motif Original Motif Forward 2 6 0.0452724 Consensus sequence (original motif): VBACGTGV Consensus sequence (reverse complement motif): VCACGTBV Alignment: VBACGTGV -YGCGTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 53 HIF1AARNT Original Motif Original Motif Backward 2 6 0.0452724 Consensus sequence (original motif): VBACGTGV Consensus sequence (reverse complement motif): VCACGTBV Alignment: VBACGTGV -YGCGTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 57 Mycn Original Motif Reverse Complement Forward 3 6 0.0718227 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: GCCACGTGSD --YGCGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 33 Mycn Original Motif Reverse Complement Forward 3 6 0.0718227 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: GCCACGTGSD --YGCGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 36 csGCCCCGCCCCsc Reverse Complement Original Motif Forward 5 6 0.0736681 Consensus sequence (original motif): HVGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCVD Alignment: HVGCCCCGCCCCBB ----CACGCM---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 Myc Original Motif Reverse Complement Forward 3 6 0.0739492 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: DCCACGTGCV --YGCGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 58 Myc Original Motif Reverse Complement Forward 3 6 0.0739492 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: DCCACGTGCV --YGCGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 33 Motif name: Mycn Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD ************************************************************************ Best Matches for Motif ID 33 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 57 Mycn Original Motif Original Motif Forward 1 10 0 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: HSCACGTGGC HSCACGTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 58 Myc Original Motif Original Motif Backward 1 10 0.0167031 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: VGCACGTGGH HSCACGTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 Myc Original Motif Original Motif Backward 1 10 0.0167031 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: VGCACGTGGH HSCACGTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 42 sSGTCACGTGACSs Original Motif Original Motif Backward 3 10 0.0795472 Consensus sequence (original motif): SGGTCACGTGACCS Consensus sequence (reverse complement motif): SGGTCACGTGACCS Alignment: SGGTCACGTGACCS --HSCACGTGGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 59 GABPA Reverse Complement Reverse Complement Forward 1 10 0.105143 Consensus sequence (original motif): CCGGAAGTGVV Consensus sequence (reverse complement motif): VVCACTTCCGG Alignment: VVCACTTCCGG GCCACGTGSD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 GABPA Reverse Complement Reverse Complement Forward 1 10 0.105143 Consensus sequence (original motif): CCGGAAGTGVV Consensus sequence (reverse complement motif): VVCACTTCCGG Alignment: VVCACTTCCGG GCCACGTGSD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 27 Klf4 Original Motif Original Motif Forward 1 10 0.10603 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: DGGGYGKGGC HSCACGTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 51 Klf4 Original Motif Original Motif Forward 1 10 0.10603 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: DGGGYGKGGC HSCACGTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 46 Zfx Reverse Complement Reverse Complement Forward 4 10 0.106697 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: VAGGCCBBGGCVBB ---GCCACGTGSD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 22 Zfx Reverse Complement Reverse Complement Forward 4 10 0.106697 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: VAGGCCBBGGCVBB ---GCCACGTGSD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 34 Motif name: Myc Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV ************************************************************************ Best Matches for Motif ID 34 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 58 Myc Original Motif Original Motif Backward 1 10 0 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: VGCACGTGGH VGCACGTGGH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 57 Mycn Reverse Complement Reverse Complement Forward 1 10 0.0167031 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: GCCACGTGSD DCCACGTGCV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 33 Mycn Reverse Complement Reverse Complement Forward 1 10 0.0167031 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: GCCACGTGSD DCCACGTGCV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 42 sSGTCACGTGACSs Reverse Complement Original Motif Backward 3 10 0.0813632 Consensus sequence (original motif): SGGTCACGTGACCS Consensus sequence (reverse complement motif): SGGTCACGTGACCS Alignment: SGGTCACGTGACCS --DCCACGTGCV-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 59 GABPA Reverse Complement Reverse Complement Backward 2 10 0.100737 Consensus sequence (original motif): CCGGAAGTGVV Consensus sequence (reverse complement motif): VVCACTTCCGG Alignment: VVCACTTCCGG DCCACGTGCV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 GABPA Reverse Complement Reverse Complement Backward 2 10 0.100737 Consensus sequence (original motif): CCGGAAGTGVV Consensus sequence (reverse complement motif): VVCACTTCCGG Alignment: VVCACTTCCGG DCCACGTGCV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 51 Klf4 Original Motif Original Motif Backward 1 10 0.105078 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: DGGGYGKGGC VGCACGTGGH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 27 Klf4 Original Motif Original Motif Backward 1 10 0.105078 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: DGGGYGKGGC VGCACGTGGH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 46 Zfx Reverse Complement Reverse Complement Backward 2 10 0.109248 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: VAGGCCBBGGCVBB ---DCCACGTGCV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 22 Zfx Reverse Complement Reverse Complement Backward 2 10 0.109248 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: VAGGCCBBGGCVBB ---DCCACGTGCV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 35 Motif name: GABPA Consensus sequence (original motif): CCGGAAGTGVV Consensus sequence (reverse complement motif): VVCACTTCCGG ************************************************************************ Best Matches for Motif ID 35 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 59 GABPA Original Motif Original Motif Backward 1 11 0 Consensus sequence (original motif): CCGGAAGTGVV Consensus sequence (reverse complement motif): VVCACTTCCGG Alignment: CCGGAAGTGVV CCGGAAGTGVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 31 Pax5 Reverse Complement Original Motif Backward 3 11 0.113389 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR -------VVCACTTCCGG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 55 Pax5 Original Motif Reverse Complement Backward 3 11 0.113389 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD -------CCGGAAGTGVV-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 22 Zfx Reverse Complement Original Motif Forward 1 11 0.114496 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV VVCACTTCCGG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 46 Zfx Original Motif Reverse Complement Forward 1 11 0.114496 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: VAGGCCBBGGCVBB CCGGAAGTGVV--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 40 kcACCTGCAgc Reverse Complement Original Motif Forward 1 11 0.117147 Consensus sequence (original motif): BCACCTGCABC Consensus sequence (reverse complement motif): GBTGCAGGTGB Alignment: BCACCTGCABC VVCACTTCCGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 45 wbgTAAATAww Original Motif Original Motif Backward 1 11 0.117976 Consensus sequence (original motif): DBGTAAATAHD Consensus sequence (reverse complement motif): DHTATTTACBD Alignment: DBGTAAATAHD CCGGAAGTGVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 44 dhACATTCTkh Reverse Complement Original Motif Forward 1 11 0.118278 Consensus sequence (original motif): DHACATTCTGH Consensus sequence (reverse complement motif): HCAGAATGTHD Alignment: DHACATTCTGH VVCACTTCCGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 6 Motif 6 Original Motif Original Motif Backward 1 11 0.120605 Consensus sequence (original motif): AATTYDGAARTAWW Consensus sequence (reverse complement motif): WWTAKTTCDKAATT Alignment: AATTYDGAARTAWW ---CCGGAAGTGVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 38 cccGCCCCGCCCCsb Reverse Complement Original Motif Backward 2 11 0.124188 Consensus sequence (original motif): BCCGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCGGB Alignment: BCCGCCCCGCCCCBB ---VVCACTTCCGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 36 Motif name: csGCCCCGCCCCsc Consensus sequence (original motif): HVGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCVD ************************************************************************ Best Matches for Motif ID 36 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 38 cccGCCCCGCCCCsb Reverse Complement Reverse Complement Forward 1 14 0 Consensus sequence (original motif): BCCGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCGGB Alignment: BBGGGGCGGGGCGGB BBGGGGCGGGGCVD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 7 Motif 7 Original Motif Original Motif Forward 1 14 0.0117332 Consensus sequence (original motif): CSKCCCCGCCCCSY Consensus sequence (reverse complement motif): MSGGGGCGGGGYSG Alignment: CSKCCCCGCCCCSY HVGCCCCGCCCCBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 55 Pax5 Reverse Complement Original Motif Backward 1 14 0.0747029 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR ------BBGGGGCGGGGCVD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 31 Pax5 Original Motif Reverse Complement Backward 1 14 0.0747029 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD ------HVGCCCCGCCCCBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 22 Zfx Reverse Complement Original Motif Forward 1 14 0.0884848 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV BBGGGGCGGGGCVD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 46 Zfx Original Motif Reverse Complement Forward 1 14 0.0884848 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: VAGGCCBBGGCVBB HVGCCCCGCCCCBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 42 sSGTCACGTGACSs Original Motif Reverse Complement Forward 1 14 0.0971132 Consensus sequence (original motif): SGGTCACGTGACCS Consensus sequence (reverse complement motif): SGGTCACGTGACCS Alignment: SGGTCACGTGACCS HVGCCCCGCCCCBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 30 PLAG1 Reverse Complement Original Motif Forward 2 13 0.609319 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: GGGGCCCAAGGGGG- -BBGGGGCGGGGCVD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 54 PLAG1 Original Motif Reverse Complement Forward 2 13 0.609319 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: CCCCCTTGGGCCCC- -HVGCCCCGCCCCBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 47 Egr1 Original Motif Reverse Complement Forward 1 11 1.60337 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: YCGCCCACGCH--- HVGCCCCGCCCCBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 37 Motif name: tkAAATAATAtw Consensus sequence (original motif): HDAAATAATAHW Consensus sequence (reverse complement motif): WHTATTATTTDH ************************************************************************ Best Matches for Motif ID 37 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 41 wwAAATAATAtw Original Motif Original Motif Forward 1 12 0 Consensus sequence (original motif): HDAAATAATADD Consensus sequence (reverse complement motif): DDTATTATTTDH Alignment: HDAAATAATADD HDAAATAATAHW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 3 Motif 3 Reverse Complement Reverse Complement Backward 2 12 0.0522317 Consensus sequence (original motif): AWAAAWTWAAASWA Consensus sequence (reverse complement motif): TWSTTTWAWTTTWT Alignment: TWSTTTWAWTTTWT -WHTATTATTTDH- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 9 Motif 9 Reverse Complement Original Motif Backward 1 12 0.0641975 Consensus sequence (original motif): AATHATATWTHAAA Consensus sequence (reverse complement motif): TTTDAWATATHATT Alignment: AATHATATWTHAAA --WHTATTATTTDH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 5 Motif 5 Reverse Complement Reverse Complement Backward 2 12 0.0704475 Consensus sequence (original motif): AWTAAATAYAATTT Consensus sequence (reverse complement motif): AAATTKTATTTAWT Alignment: AAATTKTATTTAWT -WHTATTATTTDH- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 16 Motif 16 Reverse Complement Reverse Complement Backward 1 12 0.0864198 Consensus sequence (original motif): ACAAWTRATTTTGA Consensus sequence (reverse complement motif): TCAAAATKAWTTGT Alignment: TCAAAATKAWTTGT --WHTATTATTTDH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 6 Motif 6 Reverse Complement Reverse Complement Forward 1 12 0.09076 Consensus sequence (original motif): AATTYDGAARTAWW Consensus sequence (reverse complement motif): WWTAKTTCDKAATT Alignment: WWTAKTTCDKAATT WHTATTATTTDH-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 Motif 19 Reverse Complement Reverse Complement Backward 2 12 0.096142 Consensus sequence (original motif): TTCWTAGATTAWA Consensus sequence (reverse complement motif): TWTAATCTAWGAA Alignment: TWTAATCTAWGAA WHTATTATTTDH- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 45 wbgTAAATAww Reverse Complement Reverse Complement Forward 1 11 0.560292 Consensus sequence (original motif): DBGTAAATAHD Consensus sequence (reverse complement motif): DHTATTTACBD Alignment: DHTATTTACBD- WHTATTATTTDH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 Motif 18 Reverse Complement Reverse Complement Backward 1 11 0.579665 Consensus sequence (original motif): TTAGWTWATAA Consensus sequence (reverse complement motif): TTATWAWCTAA Alignment: -TTATWAWCTAA WHTATTATTTDH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 43 wsTACwGTAsw Original Motif Reverse Complement Backward 1 11 0.587493 Consensus sequence (original motif): HVTACWGTABD Consensus sequence (reverse complement motif): DBTACWGTAVH Alignment: -DBTACWGTAVH HDAAATAATAHW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 38 Motif name: cccGCCCCGCCCCsb Consensus sequence (original motif): BCCGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCGGB ************************************************************************ Best Matches for Motif ID 38 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 55 Pax5 Reverse Complement Reverse Complement Forward 1 15 0.0992376 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD BBGGGGCGGGGCGGB----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 31 Pax5 Reverse Complement Reverse Complement Forward 1 15 0.0992376 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD BBGGGGCGGGGCGGB----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 36 csGCCCCGCCCCsc Reverse Complement Reverse Complement Forward 1 14 0.5 Consensus sequence (original motif): HVGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCVD Alignment: BBGGGGCGGGGCVD- BBGGGGCGGGGCGGB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 7 Motif 7 Original Motif Original Motif Backward 1 14 0.513015 Consensus sequence (original motif): CSKCCCCGCCCCSY Consensus sequence (reverse complement motif): MSGGGGCGGGGYSG Alignment: -CSKCCCCGCCCCSY BCCGCCCCGCCCCBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 46 Zfx Original Motif Original Motif Forward 1 14 0.574434 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV- BCCGCCCCGCCCCBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 22 Zfx Original Motif Original Motif Forward 1 14 0.574434 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV- BCCGCCCCGCCCCBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 42 sSGTCACGTGACSs Reverse Complement Original Motif Forward 1 14 0.601399 Consensus sequence (original motif): SGGTCACGTGACCS Consensus sequence (reverse complement motif): SGGTCACGTGACCS Alignment: SGGTCACGTGACCS- BBGGGGCGGGGCGGB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 30 PLAG1 Reverse Complement Original Motif Forward 1 14 0.604586 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: GGGGCCCAAGGGGG- BBGGGGCGGGGCGGB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 54 PLAG1 Original Motif Reverse Complement Forward 1 14 0.604586 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: CCCCCTTGGGCCCC- BCCGCCCCGCCCCBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 47 Egr1 Original Motif Reverse Complement Forward 1 11 2.09159 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: YCGCCCACGCH---- BCCGCCCCGCCCCBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 39 Motif name: kCAGCCAATmr Consensus sequence (original motif): DCAGCCAATVR Consensus sequence (reverse complement motif): MBATTGGCTGH ************************************************************************ Best Matches for Motif ID 39 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 37 tkAAATAATAtw Reverse Complement Reverse Complement Forward 2 11 0.0559269 Consensus sequence (original motif): HDAAATAATAHW Consensus sequence (reverse complement motif): WHTATTATTTDH Alignment: WHTATTATTTDH -MBATTGGCTGH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 44 dhACATTCTkh Original Motif Reverse Complement Forward 1 11 0.0588235 Consensus sequence (original motif): DHACATTCTGH Consensus sequence (reverse complement motif): HCAGAATGTHD Alignment: HCAGAATGTHD DCAGCCAATVR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 41 wwAAATAATAtw Reverse Complement Reverse Complement Forward 2 11 0.0597643 Consensus sequence (original motif): HDAAATAATADD Consensus sequence (reverse complement motif): DDTATTATTTDH Alignment: DDTATTATTTDH -MBATTGGCTGH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 40 kcACCTGCAgc Reverse Complement Original Motif Backward 1 11 0.0599548 Consensus sequence (original motif): BCACCTGCABC Consensus sequence (reverse complement motif): GBTGCAGGTGB Alignment: BCACCTGCABC MBATTGGCTGH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 Motif 18 Original Motif Original Motif Backward 1 11 0.0661765 Consensus sequence (original motif): TTAGWTWATAA Consensus sequence (reverse complement motif): TTATWAWCTAA Alignment: TTAGWTWATAA DCAGCCAATVR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 59 GABPA Original Motif Original Motif Backward 2 10 0.56089 Consensus sequence (original motif): CCGGAAGTGVV Consensus sequence (reverse complement motif): VVCACTTCCGG Alignment: -CCGGAAGTGVV DCAGCCAATVR- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 GABPA Original Motif Original Motif Backward 2 10 0.56089 Consensus sequence (original motif): CCGGAAGTGVV Consensus sequence (reverse complement motif): VVCACTTCCGG Alignment: -CCGGAAGTGVV DCAGCCAATVR- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 45 wbgTAAATAww Reverse Complement Reverse Complement Forward 2 10 0.561975 Consensus sequence (original motif): DBGTAAATAHD Consensus sequence (reverse complement motif): DHTATTTACBD Alignment: DHTATTTACBD- -MBATTGGCTGH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 46 Zfx Reverse Complement Original Motif Forward 5 10 0.563709 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV- ----MBATTGGCTGH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 22 Zfx Original Motif Reverse Complement Forward 5 10 0.563709 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: VAGGCCBBGGCVBB- ----DCAGCCAATVR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 40 Motif name: kcACCTGCAgc Consensus sequence (original motif): BCACCTGCABC Consensus sequence (reverse complement motif): GBTGCAGGTGB ************************************************************************ Best Matches for Motif ID 40 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 43 wsTACwGTAsw Original Motif Reverse Complement Backward 1 11 0.0215284 Consensus sequence (original motif): HVTACWGTABD Consensus sequence (reverse complement motif): DBTACWGTAVH Alignment: DBTACWGTAVH BCACCTGCABC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 44 dhACATTCTkh Original Motif Original Motif Backward 1 11 0.0254134 Consensus sequence (original motif): DHACATTCTGH Consensus sequence (reverse complement motif): HCAGAATGTHD Alignment: DHACATTCTGH BCACCTGCABC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 42 sSGTCACGTGACSs Original Motif Original Motif Forward 4 11 0.031338 Consensus sequence (original motif): SGGTCACGTGACCS Consensus sequence (reverse complement motif): SGGTCACGTGACCS Alignment: SGGTCACGTGACCS ---BCACCTGCABC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 36 csGCCCCGCCCCsc Original Motif Original Motif Backward 3 11 0.0402518 Consensus sequence (original motif): HVGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCVD Alignment: HVGCCCCGCCCCBB -BCACCTGCABC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 7 Motif 7 Original Motif Original Motif Forward 2 11 0.0411257 Consensus sequence (original motif): CSKCCCCGCCCCSY Consensus sequence (reverse complement motif): MSGGGGCGGGGYSG Alignment: CSKCCCCGCCCCSY -BCACCTGCABC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 55 Pax5 Original Motif Reverse Complement Backward 6 11 0.0420218 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD ----BCACCTGCABC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 31 Pax5 Reverse Complement Original Motif Forward 5 11 0.0420218 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR ----GBTGCAGGTGB----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 GABPA Reverse Complement Original Motif Backward 1 11 0.0423275 Consensus sequence (original motif): CCGGAAGTGVV Consensus sequence (reverse complement motif): VVCACTTCCGG Alignment: CCGGAAGTGVV GBTGCAGGTGB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 59 GABPA Original Motif Reverse Complement Backward 1 11 0.0423275 Consensus sequence (original motif): CCGGAAGTGVV Consensus sequence (reverse complement motif): VVCACTTCCGG Alignment: VVCACTTCCGG BCACCTGCABC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 39 kCAGCCAATmr Reverse Complement Original Motif Forward 1 11 0.0439586 Consensus sequence (original motif): DCAGCCAATVR Consensus sequence (reverse complement motif): MBATTGGCTGH Alignment: DCAGCCAATVR GBTGCAGGTGB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 41 Motif name: wwAAATAATAtw Consensus sequence (original motif): HDAAATAATADD Consensus sequence (reverse complement motif): DDTATTATTTDH ************************************************************************ Best Matches for Motif ID 41 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 37 tkAAATAATAtw Original Motif Original Motif Forward 1 12 0 Consensus sequence (original motif): HDAAATAATAHW Consensus sequence (reverse complement motif): WHTATTATTTDH Alignment: HDAAATAATAHW HDAAATAATADD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 3 Motif 3 Original Motif Original Motif Backward 2 12 0.0536028 Consensus sequence (original motif): AWAAAWTWAAASWA Consensus sequence (reverse complement motif): TWSTTTWAWTTTWT Alignment: AWAAAWTWAAASWA -HDAAATAATADD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 9 Motif 9 Reverse Complement Original Motif Forward 3 12 0.0591821 Consensus sequence (original motif): AATHATATWTHAAA Consensus sequence (reverse complement motif): TTTDAWATATHATT Alignment: AATHATATWTHAAA --DDTATTATTTDH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 5 Motif 5 Reverse Complement Reverse Complement Forward 2 12 0.0715278 Consensus sequence (original motif): AWTAAATAYAATTT Consensus sequence (reverse complement motif): AAATTKTATTTAWT Alignment: AAATTKTATTTAWT -DDTATTATTTDH- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 16 Motif 16 Reverse Complement Reverse Complement Backward 1 12 0.0912037 Consensus sequence (original motif): ACAAWTRATTTTGA Consensus sequence (reverse complement motif): TCAAAATKAWTTGT Alignment: TCAAAATKAWTTGT --DDTATTATTTDH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 6 Motif 6 Reverse Complement Reverse Complement Backward 3 12 0.0924576 Consensus sequence (original motif): AATTYDGAARTAWW Consensus sequence (reverse complement motif): WWTAKTTCDKAATT Alignment: WWTAKTTCDKAATT DDTATTATTTDH-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 8 Motif 8 Reverse Complement Reverse Complement Forward 2 12 0.0989198 Consensus sequence (original motif): AAATRWTAAAATCA Consensus sequence (reverse complement motif): TGATTTTAWKATTT Alignment: TGATTTTAWKATTT -DDTATTATTTDH- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 Motif 19 Reverse Complement Reverse Complement Forward 1 12 0.100849 Consensus sequence (original motif): TTCWTAGATTAWA Consensus sequence (reverse complement motif): TWTAATCTAWGAA Alignment: TWTAATCTAWGAA DDTATTATTTDH- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 45 wbgTAAATAww Reverse Complement Reverse Complement Forward 1 11 0.560545 Consensus sequence (original motif): DBGTAAATAHD Consensus sequence (reverse complement motif): DHTATTTACBD Alignment: DHTATTTACBD- DDTATTATTTDH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 Motif 18 Reverse Complement Reverse Complement Backward 1 11 0.58219 Consensus sequence (original motif): TTAGWTWATAA Consensus sequence (reverse complement motif): TTATWAWCTAA Alignment: -TTATWAWCTAA DDTATTATTTDH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 42 Motif name: sSGTCACGTGACSs Consensus sequence (original motif): SGGTCACGTGACCS Consensus sequence (reverse complement motif): SGGTCACGTGACCS ************************************************************************ Best Matches for Motif ID 42 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 31 Pax5 Original Motif Original Motif Forward 7 14 0.0353836 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR ------SGGTCACGTGACCS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 55 Pax5 Original Motif Original Motif Forward 7 14 0.0353836 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR ------SGGTCACGTGACCS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 36 csGCCCCGCCCCsc Original Motif Reverse Complement Forward 1 14 0.0374195 Consensus sequence (original motif): HVGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCVD Alignment: BBGGGGCGGGGCVD SGGTCACGTGACCS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 38 cccGCCCCGCCCCsb Reverse Complement Original Motif Forward 1 14 0.0417054 Consensus sequence (original motif): BCCGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCGGB Alignment: BCCGCCCCGCCCCBB SGGTCACGTGACCS- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 7 Motif 7 Reverse Complement Reverse Complement Backward 1 14 0.0469233 Consensus sequence (original motif): CSKCCCCGCCCCSY Consensus sequence (reverse complement motif): MSGGGGCGGGGYSG Alignment: MSGGGGCGGGGYSG SGGTCACGTGACCS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 40 kcACCTGCAgc Original Motif Original Motif Backward 1 11 1.53093 Consensus sequence (original motif): BCACCTGCABC Consensus sequence (reverse complement motif): GBTGCAGGTGB Alignment: ---BCACCTGCABC SGGTCACGTGACCS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 23 Egr1 Original Motif Reverse Complement Backward 2 10 2.0456 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: ----YCGCCCACGCH SGGTCACGTGACCS- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 47 Egr1 Reverse Complement Original Motif Backward 2 10 2.0456 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: ----HGCGTGGGCGK SGGTCACGTGACCS- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 54 PLAG1 Reverse Complement Reverse Complement Forward 8 7 3.51604 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: CCCCCTTGGGCCCC------- -------SGGTCACGTGACCS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 30 PLAG1 Reverse Complement Reverse Complement Forward 8 7 3.51604 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: CCCCCTTGGGCCCC------- -------SGGTCACGTGACCS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 43 Motif name: wsTACwGTAsw Consensus sequence (original motif): HVTACWGTABD Consensus sequence (reverse complement motif): DBTACWGTAVH ************************************************************************ Best Matches for Motif ID 43 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 40 kcACCTGCAgc Original Motif Reverse Complement Forward 1 11 0.00144069 Consensus sequence (original motif): BCACCTGCABC Consensus sequence (reverse complement motif): GBTGCAGGTGB Alignment: GBTGCAGGTGB HVTACWGTABD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 41 wwAAATAATAtw Original Motif Reverse Complement Forward 2 11 0.0124158 Consensus sequence (original motif): HDAAATAATADD Consensus sequence (reverse complement motif): DDTATTATTTDH Alignment: DDTATTATTTDH -HVTACWGTABD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 37 tkAAATAATAtw Original Motif Reverse Complement Forward 2 11 0.0151936 Consensus sequence (original motif): HDAAATAATAHW Consensus sequence (reverse complement motif): WHTATTATTTDH Alignment: WHTATTATTTDH -HVTACWGTABD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 6 Motif 6 Original Motif Original Motif Backward 4 11 0.016835 Consensus sequence (original motif): AATTYDGAARTAWW Consensus sequence (reverse complement motif): WWTAKTTCDKAATT Alignment: AATTYDGAARTAWW HVTACWGTABD--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 45 wbgTAAATAww Reverse Complement Original Motif Backward 1 11 0.0189995 Consensus sequence (original motif): DBGTAAATAHD Consensus sequence (reverse complement motif): DHTATTTACBD Alignment: DBGTAAATAHD DBTACWGTAVH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 9 Motif 9 Reverse Complement Reverse Complement Backward 4 11 0.0212542 Consensus sequence (original motif): AATHATATWTHAAA Consensus sequence (reverse complement motif): TTTDAWATATHATT Alignment: TTTDAWATATHATT DBTACWGTAVH--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 55 Pax5 Original Motif Original Motif Forward 6 11 0.0237795 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR -----HVTACWGTABD---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 31 Pax5 Original Motif Original Motif Forward 6 11 0.0237795 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR -----HVTACWGTABD---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 Motif 19 Reverse Complement Original Motif Backward 3 11 0.0275673 Consensus sequence (original motif): TTCWTAGATTAWA Consensus sequence (reverse complement motif): TWTAATCTAWGAA Alignment: TTCWTAGATTAWA DBTACWGTAVH-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 4 Motif 4 Original Motif Original Motif Backward 2 10 0.525634 Consensus sequence (original motif): AAAAWTTRCWT Consensus sequence (reverse complement motif): AWGKAAWTTTT Alignment: -AAAAWTTRCWT HVTACWGTABD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 44 Motif name: dhACATTCTkh Consensus sequence (original motif): DHACATTCTGH Consensus sequence (reverse complement motif): HCAGAATGTHD ************************************************************************ Best Matches for Motif ID 44 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 40 kcACCTGCAgc Original Motif Original Motif Backward 1 11 0.0238442 Consensus sequence (original motif): BCACCTGCABC Consensus sequence (reverse complement motif): GBTGCAGGTGB Alignment: BCACCTGCABC DHACATTCTGH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 16 Motif 16 Reverse Complement Reverse Complement Backward 4 11 0.0258838 Consensus sequence (original motif): ACAAWTRATTTTGA Consensus sequence (reverse complement motif): TCAAAATKAWTTGT Alignment: TCAAAATKAWTTGT HCAGAATGTHD--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 41 wwAAATAATAtw Reverse Complement Reverse Complement Forward 2 11 0.0292508 Consensus sequence (original motif): HDAAATAATADD Consensus sequence (reverse complement motif): DDTATTATTTDH Alignment: DDTATTATTTDH -HCAGAATGTHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 37 tkAAATAATAtw Reverse Complement Reverse Complement Backward 1 11 0.0364899 Consensus sequence (original motif): HDAAATAATAHW Consensus sequence (reverse complement motif): WHTATTATTTDH Alignment: WHTATTATTTDH -HCAGAATGTHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 6 Motif 6 Reverse Complement Original Motif Backward 4 11 0.0400884 Consensus sequence (original motif): AATTYDGAARTAWW Consensus sequence (reverse complement motif): WWTAKTTCDKAATT Alignment: AATTYDGAARTAWW HCAGAATGTHD--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 39 kCAGCCAATmr Original Motif Reverse Complement Forward 1 11 0.0412582 Consensus sequence (original motif): DCAGCCAATVR Consensus sequence (reverse complement motif): MBATTGGCTGH Alignment: MBATTGGCTGH DHACATTCTGH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 59 GABPA Original Motif Reverse Complement Forward 1 11 0.0418896 Consensus sequence (original motif): CCGGAAGTGVV Consensus sequence (reverse complement motif): VVCACTTCCGG Alignment: VVCACTTCCGG DHACATTCTGH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 GABPA Reverse Complement Original Motif Forward 1 11 0.0418896 Consensus sequence (original motif): CCGGAAGTGVV Consensus sequence (reverse complement motif): VVCACTTCCGG Alignment: CCGGAAGTGVV HCAGAATGTHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 15 Motif 15 Reverse Complement Reverse Complement Backward 2 11 0.0448232 Consensus sequence (original motif): ATMACAATAAAA Consensus sequence (reverse complement motif): TTTTATTGTYAT Alignment: TTTTATTGTYAT HCAGAATGTHD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 2 Motif 2 Reverse Complement Original Motif Forward 3 11 0.045689 Consensus sequence (original motif): RGRAGARRGARRAR Consensus sequence (reverse complement motif): MTMMTCMMTCTKCK Alignment: RGRAGARRGARRAR --HCAGAATGTHD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 45 Motif name: wbgTAAATAww Consensus sequence (original motif): DBGTAAATAHD Consensus sequence (reverse complement motif): DHTATTTACBD ************************************************************************ Best Matches for Motif ID 45 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 37 tkAAATAATAtw Original Motif Original Motif Backward 1 11 0.00892084 Consensus sequence (original motif): HDAAATAATAHW Consensus sequence (reverse complement motif): WHTATTATTTDH Alignment: HDAAATAATAHW -DBGTAAATAHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 41 wwAAATAATAtw Reverse Complement Reverse Complement Backward 2 11 0.00917337 Consensus sequence (original motif): HDAAATAATADD Consensus sequence (reverse complement motif): DDTATTATTTDH Alignment: DDTATTATTTDH DHTATTTACBD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 9 Motif 9 Reverse Complement Original Motif Backward 4 11 0.0177412 Consensus sequence (original motif): AATHATATWTHAAA Consensus sequence (reverse complement motif): TTTDAWATATHATT Alignment: AATHATATWTHAAA DHTATTTACBD--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 6 Motif 6 Original Motif Original Motif Backward 1 11 0.0205821 Consensus sequence (original motif): AATTYDGAARTAWW Consensus sequence (reverse complement motif): WWTAKTTCDKAATT Alignment: AATTYDGAARTAWW ---DBGTAAATAHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 4 Motif 4 Reverse Complement Original Motif Forward 1 11 0.0288058 Consensus sequence (original motif): AAAAWTTRCWT Consensus sequence (reverse complement motif): AWGKAAWTTTT Alignment: AAAAWTTRCWT DHTATTTACBD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 3 Motif 3 Reverse Complement Original Motif Backward 2 11 0.0337252 Consensus sequence (original motif): AWAAAWTWAAASWA Consensus sequence (reverse complement motif): TWSTTTWAWTTTWT Alignment: AWAAAWTWAAASWA --DHTATTTACBD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 43 wsTACwGTAsw Reverse Complement Original Motif Backward 1 11 0.0399273 Consensus sequence (original motif): HVTACWGTABD Consensus sequence (reverse complement motif): DBTACWGTAVH Alignment: HVTACWGTABD DHTATTTACBD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 5 Motif 5 Reverse Complement Original Motif Backward 1 11 0.0404685 Consensus sequence (original motif): AWTAAATAYAATTT Consensus sequence (reverse complement motif): AAATTKTATTTAWT Alignment: AWTAAATAYAATTT ---DHTATTTACBD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 31 Pax5 Original Motif Original Motif Backward 10 11 0.0439858 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR DBGTAAATAHD--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 55 Pax5 Original Motif Original Motif Forward 1 11 0.0439858 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR DBGTAAATAHD--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 46 Motif name: Zfx Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB ************************************************************************ Best Matches for Motif ID 46 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 22 Zfx Original Motif Original Motif Backward 1 14 0 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV BBVGCCBVGGCCTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 38 cccGCCCCGCCCCsb Original Motif Original Motif Forward 1 14 0.089972 Consensus sequence (original motif): BCCGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCGGB Alignment: BCCGCCCCGCCCCBB BBVGCCBVGGCCTV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 31 Pax5 Original Motif Original Motif Backward 5 14 0.0996894 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR --BBVGCCBVGGCCTV---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 55 Pax5 Original Motif Original Motif Backward 5 14 0.0996894 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR --BBVGCCBVGGCCTV---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 36 csGCCCCGCCCCsc Original Motif Reverse Complement Forward 1 14 0.104023 Consensus sequence (original motif): HVGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCVD Alignment: BBGGGGCGGGGCVD BBVGCCBVGGCCTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 30 PLAG1 Reverse Complement Original Motif Forward 1 14 0.118259 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: GGGGCCCAAGGGGG VAGGCCBBGGCVBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 54 PLAG1 Original Motif Reverse Complement Forward 1 14 0.118259 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: CCCCCTTGGGCCCC BBVGCCBVGGCCTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 7 Motif 7 Original Motif Reverse Complement Forward 1 14 0.118483 Consensus sequence (original motif): CSKCCCCGCCCCSY Consensus sequence (reverse complement motif): MSGGGGCGGGGYSG Alignment: MSGGGGCGGGGYSG BBVGCCBVGGCCTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 GABPA Original Motif Reverse Complement Forward 1 11 1.6145 Consensus sequence (original motif): CCGGAAGTGVV Consensus sequence (reverse complement motif): VVCACTTCCGG Alignment: VVCACTTCCGG--- BBVGCCBVGGCCTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 59 GABPA Reverse Complement Original Motif Forward 1 11 1.6145 Consensus sequence (original motif): CCGGAAGTGVV Consensus sequence (reverse complement motif): VVCACTTCCGG Alignment: CCGGAAGTGVV--- VAGGCCBBGGCVBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 47 Motif name: Egr1 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH ************************************************************************ Best Matches for Motif ID 47 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 23 Egr1 Original Motif Original Motif Backward 1 11 0 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: HGCGTGGGCGK HGCGTGGGCGK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 38 cccGCCCCGCCCCsb Original Motif Reverse Complement Backward 5 11 0.107124 Consensus sequence (original motif): BCCGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCGGB Alignment: BBGGGGCGGGGCGGB HGCGTGGGCGK---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 46 Zfx Original Motif Original Motif Backward 2 11 0.110516 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV --HGCGTGGGCGK- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 22 Zfx Original Motif Original Motif Backward 2 11 0.110516 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV --HGCGTGGGCGK- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 55 Pax5 Original Motif Original Motif Backward 6 11 0.110606 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR ----HGCGTGGGCGK----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 31 Pax5 Original Motif Original Motif Forward 5 11 0.110606 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR ----HGCGTGGGCGK----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 7 Motif 7 Reverse Complement Original Motif Forward 2 11 0.111149 Consensus sequence (original motif): CSKCCCCGCCCCSY Consensus sequence (reverse complement motif): MSGGGGCGGGGYSG Alignment: CSKCCCCGCCCCSY -YCGCCCACGCH-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 36 csGCCCCGCCCCsc Original Motif Reverse Complement Forward 2 11 0.116531 Consensus sequence (original motif): HVGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCVD Alignment: BBGGGGCGGGGCVD -HGCGTGGGCGK-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 24 SP1 Reverse Complement Original Motif Forward 1 10 0.606429 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: CCCCKCCCCC- YCGCCCACGCH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 48 SP1 Original Motif Reverse Complement Forward 1 10 0.606429 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: GGGGGYGGGG- HGCGTGGGCGK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 48 Motif name: SP1 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG ************************************************************************ Best Matches for Motif ID 48 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 24 SP1 Original Motif Original Motif Forward 1 10 0 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: CCCCKCCCCC CCCCKCCCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 7 Motif 7 Reverse Complement Reverse Complement Forward 2 10 0.043504 Consensus sequence (original motif): CSKCCCCGCCCCSY Consensus sequence (reverse complement motif): MSGGGGCGGGGYSG Alignment: MSGGGGCGGGGYSG -GGGGGYGGGG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 36 csGCCCCGCCCCsc Original Motif Original Motif Forward 4 10 0.0486461 Consensus sequence (original motif): HVGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCVD Alignment: HVGCCCCGCCCCBB ---CCCCKCCCCC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 38 cccGCCCCGCCCCsb Reverse Complement Reverse Complement Backward 5 10 0.0517173 Consensus sequence (original motif): BCCGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCGGB Alignment: BBGGGGCGGGGCGGB -GGGGGYGGGG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 22 Zfx Reverse Complement Original Motif Forward 5 10 0.0930706 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV ----GGGGGYGGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 46 Zfx Reverse Complement Original Motif Backward 1 10 0.0930706 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV ----GGGGGYGGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 30 PLAG1 Reverse Complement Original Motif Forward 2 10 0.0990873 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: GGGGCCCAAGGGGG -GGGGGYGGGG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 54 PLAG1 Original Motif Reverse Complement Backward 4 10 0.0990873 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: CCCCCTTGGGCCCC -CCCCKCCCCC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 51 Klf4 Original Motif Reverse Complement Backward 1 10 0.102706 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: GCCYCMCCCD CCCCKCCCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 27 Klf4 Reverse Complement Original Motif Backward 1 10 0.102706 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: DGGGYGKGGC GGGGGYGGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 49 Motif name: TFAP2A Consensus sequence (original motif): GCCBBVRGS Consensus sequence (reverse complement motif): SCMVBBGGC ************************************************************************ Best Matches for Motif ID 49 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 25 TFAP2A Original Motif Original Motif Forward 1 9 0 Consensus sequence (original motif): GCCBBVRGS Consensus sequence (reverse complement motif): SCMVBBGGC Alignment: GCCBBVRGS GCCBBVRGS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 46 Zfx Reverse Complement Original Motif Backward 3 9 0.0516959 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV ---SCMVBBGGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 22 Zfx Reverse Complement Original Motif Backward 3 9 0.0516959 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV ---SCMVBBGGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 30 PLAG1 Original Motif Original Motif Forward 4 9 0.08003 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: GGGGCCCAAGGGGG ---GCCBBVRGS-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 54 PLAG1 Original Motif Original Motif Forward 4 9 0.08003 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: GGGGCCCAAGGGGG ---GCCBBVRGS-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 57 Mycn Reverse Complement Original Motif Forward 2 9 0.0936515 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: HSCACGTGGC -SCMVBBGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 33 Mycn Original Motif Reverse Complement Forward 2 9 0.0936515 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: GCCACGTGSD -GCCBBVRGS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 55 Pax5 Original Motif Reverse Complement Forward 8 9 0.0966967 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD -------GCCBBVRGS---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 31 Pax5 Reverse Complement Original Motif Forward 8 9 0.0966967 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR -------SCMVBBGGC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 Myc Original Motif Reverse Complement Forward 2 9 0.0999167 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: DCCACGTGCV -GCCBBVRGS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 50 Motif name: MIZF Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV ************************************************************************ Best Matches for Motif ID 50 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 26 MIZF Original Motif Original Motif Backward 1 10 0 Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV Alignment: BAACGTCCGC BAACGTCCGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 59 GABPA Reverse Complement Original Motif Backward 2 10 0.0810799 Consensus sequence (original motif): CCGGAAGTGVV Consensus sequence (reverse complement motif): VVCACTTCCGG Alignment: CCGGAAGTGVV GCGGACGTTV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 GABPA Original Motif Reverse Complement Backward 2 10 0.0810799 Consensus sequence (original motif): CCGGAAGTGVV Consensus sequence (reverse complement motif): VVCACTTCCGG Alignment: VVCACTTCCGG BAACGTCCGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 40 kcACCTGCAgc Original Motif Original Motif Forward 1 10 0.112981 Consensus sequence (original motif): BCACCTGCABC Consensus sequence (reverse complement motif): GBTGCAGGTGB Alignment: BCACCTGCABC BAACGTCCGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 44 dhACATTCTkh Original Motif Original Motif Backward 2 10 0.114583 Consensus sequence (original motif): DHACATTCTGH Consensus sequence (reverse complement motif): HCAGAATGTHD Alignment: DHACATTCTGH BAACGTCCGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 42 sSGTCACGTGACSs Reverse Complement Reverse Complement Backward 4 10 0.115556 Consensus sequence (original motif): SGGTCACGTGACCS Consensus sequence (reverse complement motif): SGGTCACGTGACCS Alignment: SGGTCACGTGACCS -GCGGACGTTV--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 38 cccGCCCCGCCCCsb Original Motif Original Motif Forward 1 10 0.122872 Consensus sequence (original motif): BCCGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCGGB Alignment: BCCGCCCCGCCCCBB BAACGTCCGC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 55 Pax5 Reverse Complement Reverse Complement Forward 2 10 0.122917 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD -GCGGACGTTV--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 31 Pax5 Reverse Complement Reverse Complement Forward 2 10 0.122917 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD -GCGGACGTTV--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 36 csGCCCCGCCCCsc Original Motif Original Motif Forward 4 10 0.123601 Consensus sequence (original motif): HVGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCVD Alignment: HVGCCCCGCCCCBB ---BAACGTCCGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 51 Motif name: Klf4 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD ************************************************************************ Best Matches for Motif ID 51 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 27 Klf4 Original Motif Original Motif Backward 1 10 0 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: DGGGYGKGGC DGGGYGKGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 7 Motif 7 Reverse Complement Original Motif Forward 3 10 0.0516385 Consensus sequence (original motif): CSKCCCCGCCCCSY Consensus sequence (reverse complement motif): MSGGGGCGGGGYSG Alignment: CSKCCCCGCCCCSY --GCCYCMCCCD-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 36 csGCCCCGCCCCsc Reverse Complement Original Motif Forward 3 10 0.0524114 Consensus sequence (original motif): HVGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCVD Alignment: HVGCCCCGCCCCBB --GCCYCMCCCD-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 38 cccGCCCCGCCCCsb Reverse Complement Original Motif Forward 3 10 0.0558821 Consensus sequence (original motif): BCCGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCGGB Alignment: BCCGCCCCGCCCCBB --GCCYCMCCCD--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 22 Zfx Reverse Complement Original Motif Backward 4 10 0.0987519 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV -GCCYCMCCCD--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 46 Zfx Reverse Complement Original Motif Backward 4 10 0.0987519 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV -GCCYCMCCCD--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 48 SP1 Original Motif Reverse Complement Backward 1 10 0.102706 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: GGGGGYGGGG DGGGYGKGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 24 SP1 Original Motif Reverse Complement Backward 1 10 0.102706 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: GGGGGYGGGG DGGGYGKGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 58 Myc Original Motif Original Motif Backward 1 10 0.105078 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: VGCACGTGGH DGGGYGKGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 Myc Original Motif Original Motif Forward 1 10 0.105078 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: VGCACGTGGH DGGGYGKGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 52 Motif name: E2F1 Consensus sequence (original motif): TTTSGCGC Consensus sequence (reverse complement motif): GCGCSAAA ************************************************************************ Best Matches for Motif ID 52 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 28 E2F1 Original Motif Original Motif Forward 1 8 0 Consensus sequence (original motif): TTTSGCGC Consensus sequence (reverse complement motif): GCGCSAAA Alignment: TTTSGCGC TTTSGCGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 30 PLAG1 Original Motif Reverse Complement Forward 2 8 0.0982639 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: CCCCCTTGGGCCCC -TTTSGCGC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 54 PLAG1 Reverse Complement Original Motif Forward 2 8 0.0982639 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: GGGGCCCAAGGGGG -GCGCSAAA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 39 kCAGCCAATmr Reverse Complement Original Motif Forward 3 8 0.10386 Consensus sequence (original motif): DCAGCCAATVR Consensus sequence (reverse complement motif): MBATTGGCTGH Alignment: DCAGCCAATVR --GCGCSAAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 23 Egr1 Reverse Complement Reverse Complement Backward 4 8 0.119792 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: YCGCCCACGCH GCGCSAAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 47 Egr1 Reverse Complement Reverse Complement Backward 4 8 0.119792 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: YCGCCCACGCH GCGCSAAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 11 Motif 11 Original Motif Original Motif Backward 3 8 0.125 Consensus sequence (original motif): ATTTWATGAAA Consensus sequence (reverse complement motif): TTTCATWAAAT Alignment: ATTTWATGAAA -TTTSGCGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 15 Motif 15 Reverse Complement Original Motif Backward 4 8 0.125 Consensus sequence (original motif): ATMACAATAAAA Consensus sequence (reverse complement motif): TTTTATTGTYAT Alignment: ATMACAATAAAA -GCGCSAAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 38 cccGCCCCGCCCCsb Reverse Complement Original Motif Backward 9 7 0.612386 Consensus sequence (original motif): BCCGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCGGB Alignment: -BCCGCCCCGCCCCBB GCGCSAAA-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 36 csGCCCCGCCCCsc Reverse Complement Original Motif Backward 8 7 0.616684 Consensus sequence (original motif): HVGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCVD Alignment: -HVGCCCCGCCCCBB GCGCSAAA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 53 Motif name: HIF1AARNT Consensus sequence (original motif): VBACGTGV Consensus sequence (reverse complement motif): VCACGTBV ************************************************************************ Best Matches for Motif ID 53 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 29 HIF1AARNT Original Motif Original Motif Forward 1 8 0 Consensus sequence (original motif): VBACGTGV Consensus sequence (reverse complement motif): VCACGTBV Alignment: VBACGTGV VBACGTGV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 57 Mycn Original Motif Reverse Complement Backward 2 8 0.0575825 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: GCCACGTGSD -VBACGTGV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 33 Mycn Original Motif Reverse Complement Forward 2 8 0.0575825 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: GCCACGTGSD -VBACGTGV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 58 Myc Original Motif Reverse Complement Backward 2 8 0.0597215 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: DCCACGTGCV -VBACGTGV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 Myc Reverse Complement Original Motif Forward 2 8 0.0597215 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: VGCACGTGGH -VCACGTBV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 40 kcACCTGCAgc Reverse Complement Reverse Complement Forward 4 8 0.0748197 Consensus sequence (original motif): BCACCTGCABC Consensus sequence (reverse complement motif): GBTGCAGGTGB Alignment: GBTGCAGGTGB ---VCACGTBV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 42 sSGTCACGTGACSs Original Motif Reverse Complement Forward 4 8 0.0767561 Consensus sequence (original motif): SGGTCACGTGACCS Consensus sequence (reverse complement motif): SGGTCACGTGACCS Alignment: SGGTCACGTGACCS ---VBACGTGV--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 26 MIZF Reverse Complement Reverse Complement Forward 3 8 0.0829928 Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV Alignment: GCGGACGTTV --VCACGTBV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 50 MIZF Reverse Complement Reverse Complement Forward 3 8 0.0829928 Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV Alignment: GCGGACGTTV --VCACGTBV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 55 Pax5 Reverse Complement Reverse Complement Backward 8 8 0.100962 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD -----VCACGTBV------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 54 Motif name: PLAG1 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC ************************************************************************ Best Matches for Motif ID 54 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 30 PLAG1 Original Motif Original Motif Forward 1 14 0 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: GGGGCCCAAGGGGG GGGGCCCAAGGGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 22 Zfx Original Motif Reverse Complement Forward 1 14 0.118259 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: VAGGCCBBGGCVBB GGGGCCCAAGGGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 46 Zfx Original Motif Reverse Complement Forward 1 14 0.118259 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: VAGGCCBBGGCVBB GGGGCCCAAGGGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 38 cccGCCCCGCCCCsb Original Motif Reverse Complement Backward 2 14 0.120124 Consensus sequence (original motif): BCCGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCGGB Alignment: BBGGGGCGGGGCGGB GGGGCCCAAGGGGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 55 Pax5 Original Motif Original Motif Forward 1 14 0.124008 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR GGGGCCCAAGGGGG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 31 Pax5 Original Motif Original Motif Forward 1 14 0.124008 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR GGGGCCCAAGGGGG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 7 Motif 7 Original Motif Reverse Complement Backward 2 13 0.617683 Consensus sequence (original motif): CSKCCCCGCCCCSY Consensus sequence (reverse complement motif): MSGGGGCGGGGYSG Alignment: -MSGGGGCGGGGYSG GGGGCCCAAGGGGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 36 csGCCCCGCCCCsc Original Motif Reverse Complement Backward 2 13 0.624856 Consensus sequence (original motif): HVGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCVD Alignment: -BBGGGGCGGGGCVD GGGGCCCAAGGGGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 48 SP1 Original Motif Reverse Complement Backward 1 10 2.1077 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: ----GGGGGYGGGG GGGGCCCAAGGGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 24 SP1 Original Motif Reverse Complement Backward 1 10 2.1077 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: ----GGGGGYGGGG GGGGCCCAAGGGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 55 Motif name: Pax5 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD ************************************************************************ Best Matches for Motif ID 55 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 31 Pax5 Original Motif Original Motif Backward 1 20 0 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR DGVBCABTGDWGCGKRRCSR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 38 cccGCCCCGCCCCsb Reverse Complement Reverse Complement Forward 1 15 2.61478 Consensus sequence (original motif): BCCGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCGGB Alignment: BBGGGGCGGGGCGGB----- MSGKKRCGCWDCABTGBBCD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 36 csGCCCCGCCCCsc Reverse Complement Original Motif Backward 1 14 3.09024 Consensus sequence (original motif): HVGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCVD Alignment: ------HVGCCCCGCCCCBB MSGKKRCGCWDCABTGBBCD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 7 Motif 7 Reverse Complement Original Motif Backward 1 14 3.09355 Consensus sequence (original motif): CSKCCCCGCCCCSY Consensus sequence (reverse complement motif): MSGGGGCGGGGYSG Alignment: ------CSKCCCCGCCCCSY MSGKKRCGCWDCABTGBBCD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 2 Motif 2 Reverse Complement Reverse Complement Backward 1 14 3.09388 Consensus sequence (original motif): RGRAGARRGARRAR Consensus sequence (reverse complement motif): MTMMTCMMTCTKCK Alignment: ------MTMMTCMMTCTKCK MSGKKRCGCWDCABTGBBCD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 42 sSGTCACGTGACSs Original Motif Original Motif Backward 1 14 3.11062 Consensus sequence (original motif): SGGTCACGTGACCS Consensus sequence (reverse complement motif): SGGTCACGTGACCS Alignment: ------SGGTCACGTGACCS DGVBCABTGDWGCGKRRCSR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 54 PLAG1 Original Motif Original Motif Forward 1 14 3.12401 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: GGGGCCCAAGGGGG------ DGVBCABTGDWGCGKRRCSR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 30 PLAG1 Original Motif Original Motif Forward 1 14 3.12401 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: GGGGCCCAAGGGGG------ DGVBCABTGDWGCGKRRCSR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 22 Zfx Original Motif Reverse Complement Backward 2 13 3.6245 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: -------VAGGCCBBGGCVBB DGVBCABTGDWGCGKRRCSR- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 46 Zfx Original Motif Reverse Complement Backward 2 13 3.6245 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: -------VAGGCCBBGGCVBB DGVBCABTGDWGCGKRRCSR- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 56 Motif name: ArntAhr Consensus sequence (original motif): YGCGTG Consensus sequence (reverse complement motif): CACGCM ************************************************************************ Best Matches for Motif ID 56 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 32 ArntAhr Original Motif Original Motif Backward 1 6 0 Consensus sequence (original motif): YGCGTG Consensus sequence (reverse complement motif): CACGCM Alignment: YGCGTG YGCGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 47 Egr1 Reverse Complement Reverse Complement Backward 1 6 0.0340278 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: YCGCCCACGCH -----CACGCM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 23 Egr1 Original Motif Original Motif Forward 1 6 0.0340278 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: HGCGTGGGCGK YGCGTG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 53 HIF1AARNT Original Motif Original Motif Forward 2 6 0.0452724 Consensus sequence (original motif): VBACGTGV Consensus sequence (reverse complement motif): VCACGTBV Alignment: VBACGTGV -YGCGTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 29 HIF1AARNT Original Motif Original Motif Forward 2 6 0.0452724 Consensus sequence (original motif): VBACGTGV Consensus sequence (reverse complement motif): VCACGTBV Alignment: VBACGTGV -YGCGTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 33 Mycn Reverse Complement Original Motif Forward 3 6 0.0718227 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: HSCACGTGGC --CACGCM-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 57 Mycn Original Motif Reverse Complement Forward 3 6 0.0718227 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: GCCACGTGSD --YGCGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 36 csGCCCCGCCCCsc Original Motif Reverse Complement Forward 5 6 0.0736681 Consensus sequence (original motif): HVGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCVD Alignment: BBGGGGCGGGGCVD ----YGCGTG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 58 Myc Original Motif Reverse Complement Forward 3 6 0.0739492 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: DCCACGTGCV --YGCGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 Myc Reverse Complement Original Motif Backward 3 6 0.0739492 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: VGCACGTGGH --CACGCM-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 57 Motif name: Mycn Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD ************************************************************************ Best Matches for Motif ID 57 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 33 Mycn Original Motif Original Motif Forward 1 10 0 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: HSCACGTGGC HSCACGTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 58 Myc Original Motif Original Motif Backward 1 10 0.0167031 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: VGCACGTGGH HSCACGTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 Myc Reverse Complement Reverse Complement Forward 1 10 0.0167031 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: DCCACGTGCV GCCACGTGSD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 42 sSGTCACGTGACSs Original Motif Reverse Complement Forward 3 10 0.0795472 Consensus sequence (original motif): SGGTCACGTGACCS Consensus sequence (reverse complement motif): SGGTCACGTGACCS Alignment: SGGTCACGTGACCS --HSCACGTGGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 GABPA Reverse Complement Reverse Complement Forward 1 10 0.105143 Consensus sequence (original motif): CCGGAAGTGVV Consensus sequence (reverse complement motif): VVCACTTCCGG Alignment: VVCACTTCCGG GCCACGTGSD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 59 GABPA Reverse Complement Reverse Complement Forward 1 10 0.105143 Consensus sequence (original motif): CCGGAAGTGVV Consensus sequence (reverse complement motif): VVCACTTCCGG Alignment: VVCACTTCCGG GCCACGTGSD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 51 Klf4 Original Motif Original Motif Forward 1 10 0.10603 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: DGGGYGKGGC HSCACGTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 27 Klf4 Original Motif Original Motif Forward 1 10 0.10603 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: DGGGYGKGGC HSCACGTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 46 Zfx Reverse Complement Reverse Complement Forward 4 10 0.106697 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: VAGGCCBBGGCVBB ---GCCACGTGSD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 22 Zfx Reverse Complement Reverse Complement Forward 4 10 0.106697 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: VAGGCCBBGGCVBB ---GCCACGTGSD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 58 Motif name: Myc Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV ************************************************************************ Best Matches for Motif ID 58 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 Myc Original Motif Original Motif Forward 1 10 0 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: VGCACGTGGH VGCACGTGGH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 57 Mycn Original Motif Original Motif Backward 1 10 0.0167031 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: HSCACGTGGC VGCACGTGGH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 33 Mycn Reverse Complement Reverse Complement Forward 1 10 0.0167031 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: GCCACGTGSD DCCACGTGCV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 42 sSGTCACGTGACSs Original Motif Reverse Complement Backward 3 10 0.0813632 Consensus sequence (original motif): SGGTCACGTGACCS Consensus sequence (reverse complement motif): SGGTCACGTGACCS Alignment: SGGTCACGTGACCS --VGCACGTGGH-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 59 GABPA Reverse Complement Reverse Complement Backward 2 10 0.100737 Consensus sequence (original motif): CCGGAAGTGVV Consensus sequence (reverse complement motif): VVCACTTCCGG Alignment: VVCACTTCCGG DCCACGTGCV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 GABPA Reverse Complement Reverse Complement Backward 2 10 0.100737 Consensus sequence (original motif): CCGGAAGTGVV Consensus sequence (reverse complement motif): VVCACTTCCGG Alignment: VVCACTTCCGG DCCACGTGCV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 51 Klf4 Original Motif Original Motif Forward 1 10 0.105078 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: DGGGYGKGGC VGCACGTGGH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 27 Klf4 Original Motif Original Motif Backward 1 10 0.105078 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: DGGGYGKGGC VGCACGTGGH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 46 Zfx Reverse Complement Reverse Complement Backward 2 10 0.109248 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: VAGGCCBBGGCVBB ---DCCACGTGCV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 22 Zfx Reverse Complement Reverse Complement Backward 2 10 0.109248 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: VAGGCCBBGGCVBB ---DCCACGTGCV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 59 Motif name: GABPA Consensus sequence (original motif): CCGGAAGTGVV Consensus sequence (reverse complement motif): VVCACTTCCGG ************************************************************************ Best Matches for Motif ID 59 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 GABPA Original Motif Original Motif Forward 1 11 0 Consensus sequence (original motif): CCGGAAGTGVV Consensus sequence (reverse complement motif): VVCACTTCCGG Alignment: CCGGAAGTGVV CCGGAAGTGVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 55 Pax5 Reverse Complement Original Motif Forward 8 11 0.113389 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR -------VVCACTTCCGG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 31 Pax5 Reverse Complement Original Motif Backward 3 11 0.113389 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR -------VVCACTTCCGG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 22 Zfx Reverse Complement Original Motif Backward 4 11 0.114496 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV VVCACTTCCGG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 46 Zfx Reverse Complement Original Motif Backward 4 11 0.114496 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV VVCACTTCCGG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 40 kcACCTGCAgc Original Motif Reverse Complement Forward 1 11 0.117147 Consensus sequence (original motif): BCACCTGCABC Consensus sequence (reverse complement motif): GBTGCAGGTGB Alignment: GBTGCAGGTGB CCGGAAGTGVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 45 wbgTAAATAww Original Motif Original Motif Forward 1 11 0.117976 Consensus sequence (original motif): DBGTAAATAHD Consensus sequence (reverse complement motif): DHTATTTACBD Alignment: DBGTAAATAHD CCGGAAGTGVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 44 dhACATTCTkh Original Motif Reverse Complement Backward 1 11 0.118278 Consensus sequence (original motif): DHACATTCTGH Consensus sequence (reverse complement motif): HCAGAATGTHD Alignment: HCAGAATGTHD CCGGAAGTGVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 6 Motif 6 Original Motif Original Motif Backward 1 11 0.120605 Consensus sequence (original motif): AATTYDGAARTAWW Consensus sequence (reverse complement motif): WWTAKTTCDKAATT Alignment: AATTYDGAARTAWW ---CCGGAAGTGVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 38 cccGCCCCGCCCCsb Original Motif Reverse Complement Forward 4 11 0.124188 Consensus sequence (original motif): BCCGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCGGB Alignment: BBGGGGCGGGGCGGB ---CCGGAAGTGVV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Results created by MOTIFSIM on 06-18-2018 14:32:36 Runtime: 695.758 seconds MOTIFSIM is written by Ngoc Tam L. 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