Best Matches in Database for Each Motif (Highest to Lowest)
Dataset #: 1 |
Motif ID: 1 |
Motif name: Motif 1 |
Original motif |
Reverse complement motif |
Consensus sequence: AAAAAMAA |
Consensus sequence: TTYTTTTT |
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Best Matches for Motif ID 1 (Highest to Lowest)
Motif ID: |
UP00037 |
Motif name: |
Zfp105_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.0145772 |
Alignment:
HDYAAAHAAMAADHD
----AAAAAMAA---
Original motif |
Reverse complement motif |
Consensus sequence: HDYAAAHAAMAADHD |
Consensus sequence: HHHTTRTTDTTTKDH |
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Motif ID: |
UP00073 |
Motif name: |
Foxa2_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.0169399 |
Alignment:
HHWAWGTAAAYAAAVDB
-------AAAAAMAA--
Original motif |
Reverse complement motif |
Consensus sequence: HHWAWGTAAAYAAAVDB |
Consensus sequence: BDVTTTKTTTACWTWHH |
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Motif ID: |
UP00180 |
Motif name: |
Hoxd13 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.0190253 |
Alignment:
HDHHTTTTATTKKHDD
----TTYTTTTT----
Original motif |
Reverse complement motif |
Consensus sequence: HDHYYAATAAAAHHHH |
Consensus sequence: HDHHTTTTATTKKHDD |
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Motif ID: |
UP00061 |
Motif name: |
Foxl1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.0193071 |
Alignment:
DWAATRTAAACAAWVVB
-------AAAAAMAA--
Original motif |
Reverse complement motif |
Consensus sequence: DWAATRTAAACAAWVVB |
Consensus sequence: VVVWTTGTTTAMATTWD |
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Motif ID: |
UP00077 |
Motif name: |
Srf_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.0203043 |
Alignment:
HHVBYTTTTTTTTDDVV
----TTYTTTTT-----
Original motif |
Reverse complement motif |
Consensus sequence: VBDDAAAAAAAAMVBHH |
Consensus sequence: HHVBYTTTTTTTTDDVV |
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Dataset #: 1 |
Motif ID: 2 |
Motif name: Motif 2 |
Original motif |
Reverse complement motif |
Consensus sequence: ACACACAC |
Consensus sequence: GTGTGTGT |
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Best Matches for Motif ID 2 (Highest to Lowest)
Motif ID: |
UP00042 |
Motif name: |
Gm397_second |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
DVMVGCACACACKCVH
----ACACACAC----
Original motif |
Reverse complement motif |
Consensus sequence: DVMVGCACACACKCVH |
Consensus sequence: HBGYGTGTGTGCVRVD |
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Motif ID: |
UP00026 |
Motif name: |
Zscan4_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.0334619 |
Alignment:
HVHRGCACACAAHHHV
----ACACACAC----
Original motif |
Reverse complement motif |
Consensus sequence: HVHRGCACACAAHHHV |
Consensus sequence: BHHHTTGTGTGCKHVD |
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Motif ID: |
UP00026 |
Motif name: |
Zscan4_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
10 |
Number of overlap: |
8 |
Similarity score: |
0.0433815 |
Alignment:
DHVDTGTGCACAYAHDH
---------ACACACAC
Original motif |
Reverse complement motif |
Consensus sequence: DHVDTGTGCACAYAHDH |
Consensus sequence: HDHTMTGTGCACADVHD |
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Motif ID: |
UP00540 |
Motif name: |
Gli3_v016060_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
9 |
Number of overlap: |
8 |
Similarity score: |
0.0444986 |
Alignment:
VYWVVHCRCCACMCACGAHSBHH
--------ACACACAC-------
Original motif |
Reverse complement motif |
Consensus sequence: VYWVVHCRCCACMCACGAHSBHH |
Consensus sequence: HHBSHTCGTGRGTGGKGDBVWMV |
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Motif ID: |
UP00042 |
Motif name: |
Gm397_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0.0453671 |
Alignment:
HHDATGTGCACATAMDH
-------ACACACAC--
Original motif |
Reverse complement motif |
Consensus sequence: HHDATGTGCACATAMDH |
Consensus sequence: HHRTATGTGCACATHHD |
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Dataset #: 1 |
Motif ID: 3 |
Motif name: Motif 3 |
Original motif |
Reverse complement motif |
Consensus sequence: AWATAMA |
Consensus sequence: TYTATWT |
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Best Matches for Motif ID 3 (Highest to Lowest)
Motif ID: |
UP00180 |
Motif name: |
Hoxd13 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
7 |
Similarity score: |
0 |
Alignment:
HDHHTTTTATTKKHDD
-----TYTATWT----
Original motif |
Reverse complement motif |
Consensus sequence: HDHYYAATAAAAHHHH |
Consensus sequence: HDHHTTTTATTKKHDD |
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Motif ID: |
UP00134 |
Motif name: |
Hoxb13 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0.0065385 |
Alignment:
VDHWTTTTATTGGDKB
-----TYTATWT----
Original motif |
Reverse complement motif |
Consensus sequence: VRHCCAATAAAAWHHV |
Consensus sequence: VDHWTTTTATTGGDKB |
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Motif ID: |
UP00121 |
Motif name: |
Hoxd10 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
7 |
Similarity score: |
0.0124058 |
Alignment:
HDDDATTTTATTKVRDB
------TYTATWT----
Original motif |
Reverse complement motif |
Consensus sequence: VDKVYAATAAAATDDDH |
Consensus sequence: HDDDATTTTATTKVRDB |
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Motif ID: |
UP00073 |
Motif name: |
Foxa2_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
7 |
Similarity score: |
0.0126252 |
Alignment:
HHWAWGTAAAYAAAVDB
-------AWATAMA---
Original motif |
Reverse complement motif |
Consensus sequence: HHWAWGTAAAYAAAVDB |
Consensus sequence: BDVTTTKTTTACWTWHH |
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Motif ID: |
UP00061 |
Motif name: |
Foxl1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
7 |
Similarity score: |
0.0146887 |
Alignment:
DWAATRTAAACAAWVVB
---AWATAMA-------
Original motif |
Reverse complement motif |
Consensus sequence: DWAATRTAAACAAWVVB |
Consensus sequence: VVVWTTGTTTAMATTWD |
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Dataset #: 1 |
Motif ID: 4 |
Motif name: Motif 4 |
Original motif |
Reverse complement motif |
Consensus sequence: GAGRMAGR |
Consensus sequence: KCTRMCTC |
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Best Matches for Motif ID 4 (Highest to Lowest)
Motif ID: |
UP00103 |
Motif name: |
Jundm2_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.0033755 |
Alignment:
VDKDRTGASTCAYHDH
---KCTRMCTC-----
Original motif |
Reverse complement motif |
Consensus sequence: VDKDRTGASTCAYHDH |
Consensus sequence: HDDKTGASTCAKHRDB |
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Motif ID: |
UP00146 |
Motif name: |
Pou6f1_3733.1 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
10 |
Number of overlap: |
8 |
Similarity score: |
0.00747412 |
Alignment:
DHDASCTCATTATVHHB
KCTRMCTC---------
Original motif |
Reverse complement motif |
Consensus sequence: VHHVATAATGAGSTDDH |
Consensus sequence: DHDASCTCATTATVHHB |
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Motif ID: |
UP00044 |
Motif name: |
Mafk_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0.00896059 |
Alignment:
DWAAAWTGCTGACTH
-------KCTRMCTC
Original motif |
Reverse complement motif |
Consensus sequence: DWAAAWTGCTGACTH |
Consensus sequence: HAGTCAGCAWTTTWD |
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Motif ID: |
UP00045 |
Motif name: |
Mafb_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.0112412 |
Alignment:
HAAWDTGCTGACDWARH
------KCTRMCTC---
Original motif |
Reverse complement motif |
Consensus sequence: HAAWDTGCTGACDWARH |
Consensus sequence: DMTWDGTCAGCADWTTH |
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Motif ID: |
UP00095 |
Motif name: |
Zfp691_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.0122072 |
Alignment:
DABBWGACTCCTHDVHV
--KCTRMCTC-------
Original motif |
Reverse complement motif |
Consensus sequence: DABBWGACTCCTHDVHV |
Consensus sequence: VHBDDAGGAGTCWBBTD |
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Dataset #: 1 |
Motif ID: 5 |
Motif name: Motif 5 |
Original motif |
Reverse complement motif |
Consensus sequence: AAASAAAA |
Consensus sequence: TTTTSTTT |
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Best Matches for Motif ID 5 (Highest to Lowest)
Motif ID: |
UP00025 |
Motif name: |
Foxk1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0.00219483 |
Alignment:
DDAATGTAAACAAAVVB
-------AAASAAAA--
Original motif |
Reverse complement motif |
Consensus sequence: DDAATGTAAACAAAVVB |
Consensus sequence: BBVTTTGTTTACATTDD |
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Motif ID: |
UP00061 |
Motif name: |
Foxl1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.00387372 |
Alignment:
DWAATRTAAACAAWVVB
-------AAASAAAA--
Original motif |
Reverse complement motif |
Consensus sequence: DWAATRTAAACAAWVVB |
Consensus sequence: VVVWTTGTTTAMATTWD |
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Motif ID: |
UP00039 |
Motif name: |
Foxj3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.00467517 |
Alignment:
HDHADGTAAACAAAVVH
-------AAASAAAA--
Original motif |
Reverse complement motif |
Consensus sequence: HDHADGTAAACAAAVVH |
Consensus sequence: DVVTTTGTTTACDTHDH |
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Motif ID: |
UP00074 |
Motif name: |
Isgf3g_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.00612789 |
Alignment:
VDRAAWCGAAACTDA
---AAASAAAA----
Original motif |
Reverse complement motif |
Consensus sequence: VDRAAWCGAAACTDA |
Consensus sequence: TDAGTTTCGWTTKDV |
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Motif ID: |
UP00180 |
Motif name: |
Hoxd13 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.00632029 |
Alignment:
HDHHTTTTATTKKHDD
----TTTTSTTT----
Original motif |
Reverse complement motif |
Consensus sequence: HDHYYAATAAAAHHHH |
Consensus sequence: HDHHTTTTATTKKHDD |
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Dataset #: 1 |
Motif ID: 6 |
Motif name: Motif 6 |
Original motif |
Reverse complement motif |
Consensus sequence: CCCASCMC |
Consensus sequence: GYGSTGGG |
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Best Matches for Motif ID 6 (Highest to Lowest)
Motif ID: |
UP00093 |
Motif name: |
Klf7_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.00921145 |
Alignment:
HBDRCCMCGCCCHHHD
----CCCASCMC----
Original motif |
Reverse complement motif |
Consensus sequence: HBDRCCMCGCCCHHHD |
Consensus sequence: DHHDGGGCGRGGKHBH |
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Motif ID: |
UP00539 |
Motif name: |
Gli2_v016060_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
13 |
Number of overlap: |
8 |
Similarity score: |
0.00924564 |
Alignment:
DBCDWHCTGGGTGGTCMDHBBAH
---GYGSTGGG------------
Original motif |
Reverse complement motif |
Consensus sequence: DTVBDDRGACCACCCAGDWDGBH |
Consensus sequence: DBCDWHCTGGGTGGTCMDHBBAH |
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Motif ID: |
UP00021 |
Motif name: |
Zfp281_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.0121799 |
Alignment:
DBCCCCCCCCCCMYC
--CCCASCMC-----
Original motif |
Reverse complement motif |
Consensus sequence: DBCCCCCCCCCCMYC |
Consensus sequence: GKRGGGGGGGGGGBD |
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Motif ID: |
UP00033 |
Motif name: |
Zfp410_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.014495 |
Alignment:
BDDYYCATCCCATDDBD
---CCCASCMC------
Original motif |
Reverse complement motif |
Consensus sequence: DVDDATGGGATGKMDDV |
Consensus sequence: BDDYYCATCCCATDDBD |
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Motif ID: |
UP00022 |
Motif name: |
Zfp740_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.0175119 |
Alignment:
BHHDYGGGGGGGGBVD
---GYGSTGGG-----
Original motif |
Reverse complement motif |
Consensus sequence: HVBCCCCCCCCMHHHB |
Consensus sequence: BHHDYGGGGGGGGBVD |
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Dataset #: 1 |
Motif ID: 7 |
Motif name: Motif 7 |
Original motif |
Reverse complement motif |
Consensus sequence: CACASASA |
Consensus sequence: TSTSTGTG |
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Best Matches for Motif ID 7 (Highest to Lowest)
Motif ID: |
UP00042 |
Motif name: |
Gm397_second |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
HBGYGTGTGTGCVRVD
---TSTSTGTG-----
Original motif |
Reverse complement motif |
Consensus sequence: DVMVGCACACACKCVH |
Consensus sequence: HBGYGTGTGTGCVRVD |
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Motif ID: |
UP00026 |
Motif name: |
Zscan4_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
8 |
Similarity score: |
0.0113361 |
Alignment:
HDHTMTGTGCACADVHD
-TSTSTGTG--------
Original motif |
Reverse complement motif |
Consensus sequence: DHVDTGTGCACAYAHDH |
Consensus sequence: HDHTMTGTGCACADVHD |
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Motif ID: |
UP00026 |
Motif name: |
Zscan4_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.0137391 |
Alignment:
BHHHTTGTGTGCKHVD
---TSTSTGTG-----
Original motif |
Reverse complement motif |
Consensus sequence: HVHRGCACACAAHHHV |
Consensus sequence: BHHHTTGTGTGCKHVD |
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Motif ID: |
UP00042 |
Motif name: |
Gm397_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
9 |
Number of overlap: |
8 |
Similarity score: |
0.0176592 |
Alignment:
HHRTATGTGCACATHHD
-TSTSTGTG--------
Original motif |
Reverse complement motif |
Consensus sequence: HHDATGTGCACATAMDH |
Consensus sequence: HHRTATGTGCACATHHD |
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Motif ID: |
UP00539 |
Motif name: |
Gli2_v016060_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
11 |
Number of overlap: |
8 |
Similarity score: |
0.0259903 |
Alignment:
DTVBDDRGACCACCCAGDWDGBH
----------CACASASA-----
Original motif |
Reverse complement motif |
Consensus sequence: DTVBDDRGACCACCCAGDWDGBH |
Consensus sequence: DBCDWHCTGGGTGGTCMDHBBAH |
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Dataset #: 1 |
Motif ID: 8 |
Motif name: Motif 8 |
Original motif |
Reverse complement motif |
Consensus sequence: CTGGCYTY |
Consensus sequence: KAKGCCAG |
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Best Matches for Motif ID 8 (Highest to Lowest)
Motif ID: |
UP00035 |
Motif name: |
Hic1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
DBBATGCCAACCHVHH
--KAKGCCAG------
Original motif |
Reverse complement motif |
Consensus sequence: DBBATGCCAACCHVHH |
Consensus sequence: DDBHGGTTGGCATVBD |
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Motif ID: |
UP00045 |
Motif name: |
Mafb_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0.00800487 |
Alignment:
DMTWDGTCAGCADWTTH
--KAKGCCAG-------
Original motif |
Reverse complement motif |
Consensus sequence: HAAWDTGCTGACDWARH |
Consensus sequence: DMTWDGTCAGCADWTTH |
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Motif ID: |
UP00092 |
Motif name: |
Myb_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0.013567 |
Alignment:
DBVKGGCAGTTGGTHB
-KAKGCCAG-------
Original motif |
Reverse complement motif |
Consensus sequence: BDACCAACTGCCRBBH |
Consensus sequence: DBVKGGCAGTTGGTHB |
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Motif ID: |
UP00066 |
Motif name: |
Hnf4a_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.0148191 |
Alignment:
HHAYTGGACTTTHDBV
---CTGGCYTY-----
Original motif |
Reverse complement motif |
Consensus sequence: BBHHAAAGTCCAMTHH |
Consensus sequence: HHAYTGGACTTTHDBV |
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Motif ID: |
UP00046 |
Motif name: |
Tcfe2a_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
10 |
Number of overlap: |
8 |
Similarity score: |
0.0155988 |
Alignment:
VBBDMYCATCTGVHHBH
---------CTGGCYTY
Original motif |
Reverse complement motif |
Consensus sequence: HVDDVCAGATGKYHBBV |
Consensus sequence: VBBDMYCATCTGVHHBH |
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Dataset #: 1 |
Motif ID: 9 |
Motif name: Motif 9 |
Original motif |
Reverse complement motif |
Consensus sequence: TTTWWAAA |
Consensus sequence: TTTWWAAA |
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Best Matches for Motif ID 9 (Highest to Lowest)
Motif ID: |
UP00061 |
Motif name: |
Foxl1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.0127432 |
Alignment:
VVVWTTGTTTAMATTWD
-----TTTWWAAA----
Original motif |
Reverse complement motif |
Consensus sequence: DWAATRTAAACAAWVVB |
Consensus sequence: VVVWTTGTTTAMATTWD |
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Motif ID: |
UP00173 |
Motif name: |
Hoxc13 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.0173675 |
Alignment:
DHWTTTTAMGAGBDHH
---TTTWWAAA-----
Original motif |
Reverse complement motif |
Consensus sequence: HHDBCTCRTAAAAWHD |
Consensus sequence: DHWTTTTAMGAGBDHH |
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Motif ID: |
UP00246 |
Motif name: |
Hoxa11 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.0197493 |
Alignment:
DDDTTTTACGACDTDH
---TTTWWAAA-----
Original motif |
Reverse complement motif |
Consensus sequence: HDADGTCGTAAAAHDD |
Consensus sequence: DDDTTTTACGACDTDH |
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|
Motif ID: |
UP00207 |
Motif name: |
Hoxb9 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.0215252 |
Alignment:
HDHHTTTTATRGCKMV
---TTTWWAAA-----
Original motif |
Reverse complement motif |
Consensus sequence: VRRGCMATAAAAHHHD |
Consensus sequence: HDHHTTTTATRGCKMV |
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Motif ID: |
UP00025 |
Motif name: |
Foxk1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.0221208 |
Alignment:
BBVTTTGTTTACATTDD
-----TTTWWAAA----
Original motif |
Reverse complement motif |
Consensus sequence: DDAATGTAAACAAAVVB |
Consensus sequence: BBVTTTGTTTACATTDD |
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Dataset #: 1 |
Motif ID: 10 |
Motif name: Motif 10 |
Original motif |
Reverse complement motif |
Consensus sequence: HTACATA |
Consensus sequence: TATGTAD |
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Best Matches for Motif ID 10 (Highest to Lowest)
Motif ID: |
UP00150 |
Motif name: |
Irx6 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
7 |
Similarity score: |
0 |
Alignment:
AHWDBTACATGTADHTH
-------TATGTAD---
Original motif |
Reverse complement motif |
Consensus sequence: HAHDTACATGTAVDWHT |
Consensus sequence: AHWDBTACATGTADHTH |
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Motif ID: |
UP00236 |
Motif name: |
Irx2 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
7 |
Similarity score: |
0.00149929 |
Alignment:
WVWDDTACATGTADDDW
-------TATGTAD---
Original motif |
Reverse complement motif |
Consensus sequence: WDDDTACATGTADDWBW |
Consensus sequence: WVWDDTACATGTADDDW |
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Motif ID: |
UP00223 |
Motif name: |
Irx3_2226.1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
8 |
Number of overlap: |
7 |
Similarity score: |
0.00245891 |
Alignment:
DDDHTACATGTAVWDHD
---HTACATA-------
Original motif |
Reverse complement motif |
Consensus sequence: DDDHTACATGTAVWDHD |
Consensus sequence: DHDWBTACATGTAHDDD |
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Motif ID: |
UP00082 |
Motif name: |
Zfp187_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
2 |
Number of overlap: |
7 |
Similarity score: |
0.00347154 |
Alignment:
HWATTAGTACATAV
------HTACATA-
Original motif |
Reverse complement motif |
Consensus sequence: BTATGTACTAATWH |
Consensus sequence: HWATTAGTACATAV |
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Motif ID: |
UP00223 |
Motif name: |
Irx3_0920.1 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
7 |
Similarity score: |
0.00490323 |
Alignment:
DDWWBTACATGTADDDD
-------TATGTAD---
Original motif |
Reverse complement motif |
Consensus sequence: DDDDTACATGTAVWWHD |
Consensus sequence: DDWWBTACATGTADDDD |
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Dataset #: 1 |
Motif ID: 11 |
Motif name: Motif 11 |
Original motif |
Reverse complement motif |
Consensus sequence: CTGDGTTC |
Consensus sequence: GAACDCAG |
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Best Matches for Motif ID 11 (Highest to Lowest)
Motif ID: |
UP00019 |
Motif name: |
Zbtb12_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
8 |
Similarity score: |
0.0140023 |
Alignment:
BDHRBGTTCTAGATCVB
-CTGDGTTC--------
Original motif |
Reverse complement motif |
Consensus sequence: BDHRBGTTCTAGATCVB |
Consensus sequence: BBGATCTAGAACBKHDB |
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Motif ID: |
UP00006 |
Motif name: |
Zic3_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
1 |
Number of overlap: |
8 |
Similarity score: |
0.0184124 |
Alignment:
DVHCYTGCTGTGHDH
GAACDCAG-------
Original motif |
Reverse complement motif |
Consensus sequence: DDDCACAGCAKGHVD |
Consensus sequence: DVHCYTGCTGTGHDH |
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Motif ID: |
UP00102 |
Motif name: |
Zic1_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0.0200294 |
Alignment:
BHDCVCAGCAGGHVD
GAACDCAG-------
Original motif |
Reverse complement motif |
Consensus sequence: BHDCVCAGCAGGHVD |
Consensus sequence: DVHCCTGCTGBGDDB |
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Motif ID: |
UP00057 |
Motif name: |
Zic2_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0.0221415 |
Alignment:
DVBCYTGCTGBGDDD
-------CTGDGTTC
Original motif |
Reverse complement motif |
Consensus sequence: HHDCVCAGCAKGVVD |
Consensus sequence: DVBCYTGCTGBGDDD |
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Motif ID: |
UP00062 |
Motif name: |
Sox4_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.0234104 |
Alignment:
HBDDDAACAAAGRVBHH
----GAACDCAG-----
Original motif |
Reverse complement motif |
Consensus sequence: HBDDDAACAAAGRVBHH |
Consensus sequence: HHBBMCTTTGTTHDDBH |
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Dataset #: 1 |
Motif ID: 12 |
Motif name: Motif 12 |
Original motif |
Reverse complement motif |
Consensus sequence: GCACACAY |
Consensus sequence: MTGTGTGC |
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Best Matches for Motif ID 12 (Highest to Lowest)
Motif ID: |
UP00042 |
Motif name: |
Gm397_second |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
DVMVGCACACACKCVH
----GCACACAY----
Original motif |
Reverse complement motif |
Consensus sequence: DVMVGCACACACKCVH |
Consensus sequence: HBGYGTGTGTGCVRVD |
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Motif ID: |
UP00026 |
Motif name: |
Zscan4_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.0213124 |
Alignment:
DHVDTGTGCACAYAHDH
-------GCACACAY--
Original motif |
Reverse complement motif |
Consensus sequence: DHVDTGTGCACAYAHDH |
Consensus sequence: HDHTMTGTGCACADVHD |
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Motif ID: |
UP00026 |
Motif name: |
Zscan4_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.0223469 |
Alignment:
BHHHTTGTGTGCKHVD
----MTGTGTGC----
Original motif |
Reverse complement motif |
Consensus sequence: HVHRGCACACAAHHHV |
Consensus sequence: BHHHTTGTGTGCKHVD |
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Motif ID: |
UP00097 |
Motif name: |
Mtf1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.0256828 |
Alignment:
HDYTTGCACACGDHBH
-----GCACACAY---
Original motif |
Reverse complement motif |
Consensus sequence: DBDHCGTGTGCAAMDH |
Consensus sequence: HDYTTGCACACGDHBH |
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Motif ID: |
UP00042 |
Motif name: |
Gm397_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.0295995 |
Alignment:
HHDATGTGCACATAMDH
-------GCACACAY--
Original motif |
Reverse complement motif |
Consensus sequence: HHDATGTGCACATAMDH |
Consensus sequence: HHRTATGTGCACATHHD |
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Dataset #: 1 |
Motif ID: 13 |
Motif name: Motif 13 |
Original motif |
Reverse complement motif |
Consensus sequence: GGAAGSAR |
Consensus sequence: MTSCTTCC |
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Best Matches for Motif ID 13 (Highest to Lowest)
Motif ID: |
UP00421 |
Motif name: |
Etv1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
MVHBACCGGAAGTVDVH
-------GGAAGSAR--
Original motif |
Reverse complement motif |
Consensus sequence: MVHBACCGGAAGTVDVH |
Consensus sequence: HBDBACTTCCGGTBHVY |
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Motif ID: |
UP00420 |
Motif name: |
Elk3 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.00132573 |
Alignment:
DVBBACCGGAAGYDVVV
-------GGAAGSAR--
Original motif |
Reverse complement motif |
Consensus sequence: DVBBACCGGAAGYDVVV |
Consensus sequence: VBVDMCTTCCGGTVBVD |
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Motif ID: |
UP00418 |
Motif name: |
Etv6 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
7 |
Number of overlap: |
8 |
Similarity score: |
0.0021068 |
Alignment:
DVHBTACTTCCGGHTHB
---MTSCTTCC------
Original motif |
Reverse complement motif |
Consensus sequence: DVHBTACTTCCGGHTHB |
Consensus sequence: BHAHCCGGAAGTABDVD |
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|
Motif ID: |
UP00419 |
Motif name: |
Spic |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
1 |
Number of overlap: |
8 |
Similarity score: |
0.00211278 |
Alignment:
VAAAGMGGAAGTWD
------GGAAGSAR
Original motif |
Reverse complement motif |
Consensus sequence: VAAAGMGGAAGTWD |
Consensus sequence: DWACTTCCRCTTTB |
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Motif ID: |
UP00409 |
Motif name: |
Elf5 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
1 |
Number of overlap: |
8 |
Similarity score: |
0.00241654 |
Alignment:
BWAHSMGGAAGTWD
------GGAAGSAR
Original motif |
Reverse complement motif |
Consensus sequence: BWAHSMGGAAGTWD |
Consensus sequence: DWACTTCCRSDTWV |
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Dataset #: 1 |
Motif ID: 14 |
Motif name: Motif 14 |
Original motif |
Reverse complement motif |
Consensus sequence: KAAAATR |
Consensus sequence: MATTTTY |
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Best Matches for Motif ID 14 (Highest to Lowest)
Motif ID: |
UP00023 |
Motif name: |
Sox30_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
7 |
Similarity score: |
0 |
Alignment:
HHHHMHATTGTTBDHD
-----MATTTTY----
Original motif |
Reverse complement motif |
Consensus sequence: DHDBAACAATDRHHHH |
Consensus sequence: HHHHMHATTGTTBDHD |
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|
|
Motif ID: |
UP00121 |
Motif name: |
Hoxd10 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
7 |
Similarity score: |
0.00226759 |
Alignment:
VDKVYAATAAAATDDDH
-------KAAAATR---
Original motif |
Reverse complement motif |
Consensus sequence: VDKVYAATAAAATDDDH |
Consensus sequence: HDDDATTTTATTKVRDB |
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|
|
Motif ID: |
UP00064 |
Motif name: |
Sox18_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
7 |
Number of overlap: |
7 |
Similarity score: |
0.00263629 |
Alignment:
BWBHATTGTTBTHDHH
---MATTTTY------
Original motif |
Reverse complement motif |
Consensus sequence: BWBHATTGTTBTHDHH |
Consensus sequence: HHDHABAACAATHBWV |
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|
|
Motif ID: |
UP00044 |
Motif name: |
Mafk_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
7 |
Number of overlap: |
7 |
Similarity score: |
0.00352186 |
Alignment:
MBHTGCADTTTTTHV
------MATTTTY--
Original motif |
Reverse complement motif |
Consensus sequence: VHAAAAADTGCAHBR |
Consensus sequence: MBHTGCADTTTTTHV |
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|
|
|
Motif ID: |
UP00101 |
Motif name: |
Sox12_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
7 |
Similarity score: |
0.00617655 |
Alignment:
THATTGTTVTHAWH
-MATTTTY------
Original motif |
Reverse complement motif |
Consensus sequence: THATTGTTVTHAWH |
Consensus sequence: DWTHAVAACAATHA |
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|
|
Dataset #: 1 |
Motif ID: 15 |
Motif name: Motif 15 |
Original motif |
Reverse complement motif |
Consensus sequence: AGCCCWGG |
Consensus sequence: CCWGGGCT |
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Best Matches for Motif ID 15 (Highest to Lowest)
Motif ID: |
UP00095 |
Motif name: |
Zfp691_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
7 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
DDHBYGAGCACTGBHHB
------AGCCCWGG---
Original motif |
Reverse complement motif |
Consensus sequence: BDHVCAGTGCTCMBHDD |
Consensus sequence: DDHBYGAGCACTGBHHB |
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|
|
|
Motif ID: |
UP00082 |
Motif name: |
Zfp187_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
2 |
Number of overlap: |
8 |
Similarity score: |
0.0100601 |
Alignment:
VHMDGGACVAGGRCDH
-------CCWGGGCT-
Original motif |
Reverse complement motif |
Consensus sequence: DDGMCCTBGTCCHYHV |
Consensus sequence: VHMDGGACVAGGRCDH |
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|
|
|
Motif ID: |
UP00066 |
Motif name: |
Hnf4a_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.0131051 |
Alignment:
BDBVMGGGGTCAABHDV
--CCWGGGCT-------
Original motif |
Reverse complement motif |
Consensus sequence: BDBVMGGGGTCAABHDV |
Consensus sequence: BHHVTTGACCCCYVVDB |
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|
|
|
Motif ID: |
UP00400 |
Motif name: |
Zif268 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
9 |
Number of overlap: |
8 |
Similarity score: |
0.0132772 |
Alignment:
VVVDHHTGCGYGGGCGDHVHHTB
--------CCWGGGCT-------
Original motif |
Reverse complement motif |
Consensus sequence: BADHBDHCGCCCMCGCAHHDBBV |
Consensus sequence: VVVDHHTGCGYGGGCGDHVHHTB |
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|
|
|
Motif ID: |
UP00079 |
Motif name: |
Esrra_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0.0150014 |
Alignment:
DBBHHTGACCCCTBBYV
-------AGCCCWGG--
Original motif |
Reverse complement motif |
Consensus sequence: VKBBAGGGGTCAHDBBH |
Consensus sequence: DBBHHTGACCCCTBBYV |
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|
|
|
Dataset #: 1 |
Motif ID: 16 |
Motif name: Motif 16 |
Original motif |
Reverse complement motif |
Consensus sequence: GAGCCATC |
Consensus sequence: GATGGCTC |
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|
|
|
Best Matches for Motif ID 16 (Highest to Lowest)
Motif ID: |
UP00103 |
Motif name: |
Jundm2_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
HDDKTGASTCAKHRDB
-----GAGCCATC---
Original motif |
Reverse complement motif |
Consensus sequence: VDKDRTGASTCAYHDH |
Consensus sequence: HDDKTGASTCAKHRDB |
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Motif ID: |
UP00046 |
Motif name: |
Tcfe2a_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0.00755596 |
Alignment:
HVDDVCAGATGKYHBBV
-------GATGGCTC--
Original motif |
Reverse complement motif |
Consensus sequence: HVDDVCAGATGKYHBBV |
Consensus sequence: VBBDMYCATCTGVHHBH |
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Motif ID: |
UP00035 |
Motif name: |
Hic1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.00844628 |
Alignment:
DBBATGCCAACCHVHH
---GAGCCATC-----
Original motif |
Reverse complement motif |
Consensus sequence: DBBATGCCAACCHVHH |
Consensus sequence: DDBHGGTTGGCATVBD |
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Motif ID: |
UP00033 |
Motif name: |
Zfp410_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
2 |
Number of overlap: |
8 |
Similarity score: |
0.0101495 |
Alignment:
DVDDATGGGATGKMDDV
--------GATGGCTC-
Original motif |
Reverse complement motif |
Consensus sequence: DVDDATGGGATGKMDDV |
Consensus sequence: BDDYYCATCCCATDDBD |
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Motif ID: |
UP00528 |
Motif name: |
Foxm1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0.0102701 |
Alignment:
VHVRCAYGATGCATCDTVVADTH
-------GATGGCTC--------
Original motif |
Reverse complement motif |
Consensus sequence: HADTBVADGATGCATCMTGMVHB |
Consensus sequence: VHVRCAYGATGCATCDTVVADTH |
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Dataset #: 1 |
Motif ID: 17 |
Motif name: Motif 17 |
Original motif |
Reverse complement motif |
Consensus sequence: GGGAGGRR |
Consensus sequence: MMCCTCCC |
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Best Matches for Motif ID 17 (Highest to Lowest)
Motif ID: |
UP00021 |
Motif name: |
Zfp281_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
DBCCCCCCCCCCMYC
--MMCCTCCC-----
Original motif |
Reverse complement motif |
Consensus sequence: DBCCCCCCCCCCMYC |
Consensus sequence: GKRGGGGGGGGGGBD |
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Motif ID: |
UP00538 |
Motif name: |
Gli1_v015681_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0.00441712 |
Alignment:
MHHHWHYTMCCHCCCACVAABVH
-------MMCCTCCC--------
Original motif |
Reverse complement motif |
Consensus sequence: MHHHWHYTMCCHCCCACVAABVH |
Consensus sequence: DVVTTVGTGGGHGGYAMHWHHHY |
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Motif ID: |
UP00093 |
Motif name: |
Klf7_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.00658839 |
Alignment:
DHHDGGGCGRGGKHBH
----GGGAGGRR----
Original motif |
Reverse complement motif |
Consensus sequence: HBDRCCMCGCCCHHHD |
Consensus sequence: DHHDGGGCGRGGKHBH |
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Motif ID: |
UP00022 |
Motif name: |
Zfp740_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.00819387 |
Alignment:
HVBCCCCCCCCMHHHB
---MMCCTCCC-----
Original motif |
Reverse complement motif |
Consensus sequence: HVBCCCCCCCCMHHHB |
Consensus sequence: BHHDYGGGGGGGGBVD |
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Motif ID: |
UP00033 |
Motif name: |
Zfp410_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.00976538 |
Alignment:
DVDDATGGGATGKMDDV
------GGGAGGRR---
Original motif |
Reverse complement motif |
Consensus sequence: DVDDATGGGATGKMDDV |
Consensus sequence: BDDYYCATCCCATDDBD |
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Dataset #: 1 |
Motif ID: 18 |
Motif name: Motif 18 |
Original motif |
Reverse complement motif |
Consensus sequence: GRRAGAGA |
Consensus sequence: TCTCTMKC |
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Best Matches for Motif ID 18 (Highest to Lowest)
Motif ID: |
UP00040 |
Motif name: |
Irf5_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
VBHAKTCTCGHTHHV
-----TCTCTMKC--
Original motif |
Reverse complement motif |
Consensus sequence: BHDAHCGAGARTHBV |
Consensus sequence: VBHAKTCTCGHTHHV |
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Motif ID: |
UP00032 |
Motif name: |
Gata3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
11 |
Number of overlap: |
8 |
Similarity score: |
0.00591803 |
Alignment:
BDHDDADAGATAAGADHBDHVD
----GRRAGAGA----------
Original motif |
Reverse complement motif |
Consensus sequence: BDHDDADAGATAAGADHBDHVD |
Consensus sequence: HBHDVHDTCTTATCTHTDDHDV |
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Motif ID: |
UP00080 |
Motif name: |
Gata5_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0.0157485 |
Alignment:
VVBHRAGATATCWDHBB
--GRRAGAGA-------
Original motif |
Reverse complement motif |
Consensus sequence: VVBHRAGATATCWDHBB |
Consensus sequence: VVHHWGATATCTMHBBV |
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Motif ID: |
UP00239 |
Motif name: |
Obox2 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
8 |
Similarity score: |
0.0165309 |
Alignment:
DBRGGGGGATTAAMTAH
-GRRAGAGA--------
Original motif |
Reverse complement motif |
Consensus sequence: DBRGGGGGATTAAMTAH |
Consensus sequence: HTARTTAATCCCCCKBD |
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Motif ID: |
UP00153 |
Motif name: |
Pitx1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
8 |
Similarity score: |
0.0181357 |
Alignment:
HBVDRGGGATTAAMDHH
-GRRAGAGA--------
Original motif |
Reverse complement motif |
Consensus sequence: HBVDRGGGATTAAMDHH |
Consensus sequence: HHDRTTAATCCCKHBVH |
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Dataset #: 1 |
Motif ID: 19 |
Motif name: Motif 19 |
Original motif |
Reverse complement motif |
Consensus sequence: CCTGGARC |
Consensus sequence: GKTCCAGG |
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Best Matches for Motif ID 19 (Highest to Lowest)
Motif ID: |
UP00019 |
Motif name: |
Zbtb12_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
BDHRBGTTCTAGATCVB
-----GKTCCAGG----
Original motif |
Reverse complement motif |
Consensus sequence: BDHRBGTTCTAGATCVB |
Consensus sequence: BBGATCTAGAACBKHDB |
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Motif ID: |
UP00082 |
Motif name: |
Zfp187_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.0114365 |
Alignment:
VHMDGGACVAGGRCDH
----GKTCCAGG----
Original motif |
Reverse complement motif |
Consensus sequence: DDGMCCTBGTCCHYHV |
Consensus sequence: VHMDGGACVAGGRCDH |
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Motif ID: |
UP00539 |
Motif name: |
Gli2_v015681_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.0166042 |
Alignment:
CBDMCMGGGTGGTCCHVBVBAH
----------GKTCCAGG----
Original motif |
Reverse complement motif |
Consensus sequence: HTBVVVDGGACCACCCRGRDBG |
Consensus sequence: CBDMCMGGGTGGTCCHVBVBAH |
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Motif ID: |
UP00043 |
Motif name: |
Bcl6b_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
7 |
Number of overlap: |
8 |
Similarity score: |
0.0186859 |
Alignment:
VHHATTCCTYGAAAGD
------CCTGGARC--
Original motif |
Reverse complement motif |
Consensus sequence: DCTTTCKAGGAATHHV |
Consensus sequence: VHHATTCCTYGAAAGD |
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Motif ID: |
UP00079 |
Motif name: |
Esrra_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
2 |
Number of overlap: |
8 |
Similarity score: |
0.0193598 |
Alignment:
HHBVHTGACCTTGVDHD
--------CCTGGARC-
Original motif |
Reverse complement motif |
Consensus sequence: DHDBCAAGGTCAHVBDH |
Consensus sequence: HHBVHTGACCTTGVDHD |
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Dataset #: 1 |
Motif ID: 20 |
Motif name: Motif 20 |
Original motif |
Reverse complement motif |
Consensus sequence: ATTAMAGG |
Consensus sequence: CCTYTAAT |
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Best Matches for Motif ID 20 (Highest to Lowest)
Motif ID: |
UP00067 |
Motif name: |
Lef1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.00264223 |
Alignment:
VDDAGATCAAAGGKDDD
-----ATTAMAGG----
Original motif |
Reverse complement motif |
Consensus sequence: DDDYCCTTTGATCTDDV |
Consensus sequence: VDDAGATCAAAGGKDDD |
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Motif ID: |
UP00083 |
Motif name: |
Tcf7l2_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.00766457 |
Alignment:
BDDASATCAAAGGMDDD
-----ATTAMAGG----
Original motif |
Reverse complement motif |
Consensus sequence: DDDYCCTTTGATSTDDV |
Consensus sequence: BDDASATCAAAGGMDDD |
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Motif ID: |
UP00152 |
Motif name: |
Arx |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.0109266 |
Alignment:
WBHAKTAATTAMKGBAV
-------ATTAMAGG--
Original motif |
Reverse complement motif |
Consensus sequence: VTBCRYTAATTARTDBW |
Consensus sequence: WBHAKTAATTAMKGBAV |
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Motif ID: |
UP00209 |
Motif name: |
Cart1_1275.1 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
9 |
Number of overlap: |
8 |
Similarity score: |
0.0133543 |
Alignment:
BVMDTTAATTAABBDDV
-CCTYTAAT--------
Original motif |
Reverse complement motif |
Consensus sequence: BVMDTTAATTAABBDDV |
Consensus sequence: VHHVVTTAATTAADRVB |
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Motif ID: |
UP00187 |
Motif name: |
Alx4 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
9 |
Number of overlap: |
8 |
Similarity score: |
0.0138063 |
Alignment:
BVHHVKTAATTAMDDCG
--------ATTAMAGG-
Original motif |
Reverse complement motif |
Consensus sequence: CGHDYTAATTARBHHVB |
Consensus sequence: BVHHVKTAATTAMDDCG |
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Dataset #: 1 |
Motif ID: 21 |
Motif name: Motif 21 |
Original motif |
Reverse complement motif |
Consensus sequence: AAACAAAC |
Consensus sequence: GTTTGTTT |
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Best Matches for Motif ID 21 (Highest to Lowest)
Motif ID: |
UP00025 |
Motif name: |
Foxk1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
BBVTTTGTTTACATTDD
--GTTTGTTT-------
Original motif |
Reverse complement motif |
Consensus sequence: DDAATGTAAACAAAVVB |
Consensus sequence: BBVTTTGTTTACATTDD |
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Motif ID: |
UP00039 |
Motif name: |
Foxj3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.00214871 |
Alignment:
HDHADGTAAACAAAVVH
-------AAACAAAC--
Original motif |
Reverse complement motif |
Consensus sequence: HDHADGTAAACAAAVVH |
Consensus sequence: DVVTTTGTTTACDTHDH |
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Motif ID: |
UP00061 |
Motif name: |
Foxl1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.00385351 |
Alignment:
VVVWTTGTTTAMATTWD
--GTTTGTTT-------
Original motif |
Reverse complement motif |
Consensus sequence: DWAATRTAAACAAWVVB |
Consensus sequence: VVVWTTGTTTAMATTWD |
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Motif ID: |
UP00041 |
Motif name: |
Foxj1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.0108706 |
Alignment:
HDHRTAAACAAAHDDD
-----AAACAAAC---
Original motif |
Reverse complement motif |
Consensus sequence: HDHRTAAACAAAHDDD |
Consensus sequence: DDDHTTTGTTTAMHDH |
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Motif ID: |
UP00073 |
Motif name: |
Foxa2_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.0132351 |
Alignment:
BDVTTTKTTTACWTWHH
--GTTTGTTT-------
Original motif |
Reverse complement motif |
Consensus sequence: HHWAWGTAAAYAAAVDB |
Consensus sequence: BDVTTTKTTTACWTWHH |
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Dataset #: 1 |
Motif ID: 22 |
Motif name: Motif 22 |
Original motif |
Reverse complement motif |
Consensus sequence: GTGGTGGY |
Consensus sequence: MCCACCAC |
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Best Matches for Motif ID 22 (Highest to Lowest)
Motif ID: |
UP00047 |
Motif name: |
Zbtb7b_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
BBDVHGGTGGTCBKDDB
---GTGGTGGY------
Original motif |
Reverse complement motif |
Consensus sequence: BDDRVGACCACCHBDVB |
Consensus sequence: BBDVHGGTGGTCBKDDB |
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Motif ID: |
UP00539 |
Motif name: |
Gli2_v015681_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.00961551 |
Alignment:
CBDMCMGGGTGGTCCHVBVBAH
-----GTGGTGGY---------
Original motif |
Reverse complement motif |
Consensus sequence: HTBVVVDGGACCACCCRGRDBG |
Consensus sequence: CBDMCMGGGTGGTCCHVBVBAH |
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Motif ID: |
UP00538 |
Motif name: |
Gli1_v016060_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
9 |
Number of overlap: |
8 |
Similarity score: |
0.0126856 |
Alignment:
HGDHVHKGACCACCCGGBGBGDB
--------MCCACCAC-------
Original motif |
Reverse complement motif |
Consensus sequence: BHCBCBCCGGGTGGTCYHVHDCH |
Consensus sequence: HGDHVHKGACCACCCGGBGBGDB |
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|
Motif ID: |
UP00540 |
Motif name: |
Gli3_v016060_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.015156 |
Alignment:
CVHBSCGGGTGGTCMHVHHCDH
-----GTGGTGGY---------
Original motif |
Reverse complement motif |
Consensus sequence: HDGHHBHRGACCACCCGSVDVG |
Consensus sequence: CVHBSCGGGTGGTCMHVHHCDH |
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|
|
Motif ID: |
UP00538 |
Motif name: |
Gli1_v015681_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
9 |
Number of overlap: |
8 |
Similarity score: |
0.0162913 |
Alignment:
BTBVTCVTGGGTGGTCMVVDVBB
-------GTGGTGGY--------
Original motif |
Reverse complement motif |
Consensus sequence: BBBDVVRGACCACCCAVGABBAB |
Consensus sequence: BTBVTCVTGGGTGGTCMVVDVBB |
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|
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Dataset #: 1 |
Motif ID: 23 |
Motif name: Motif 23 |
Original motif |
Reverse complement motif |
Consensus sequence: MTSTGTA |
Consensus sequence: TACASAR |
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Best Matches for Motif ID 23 (Highest to Lowest)
Motif ID: |
UP00026 |
Motif name: |
Zscan4_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
7 |
Similarity score: |
0 |
Alignment:
HDHTMTGTGCACADVHD
----MTSTGTA------
Original motif |
Reverse complement motif |
Consensus sequence: DHVDTGTGCACAYAHDH |
Consensus sequence: HDHTMTGTGCACADVHD |
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|
|
Motif ID: |
UP00193 |
Motif name: |
Rhox11_2205.1 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
7 |
Similarity score: |
0.000572275 |
Alignment:
WVVHWTWACAGCGHHVT
------TACASAR----
Original motif |
Reverse complement motif |
Consensus sequence: AVDHCGCTGTWAWDVVW |
Consensus sequence: WVVHWTWACAGCGHHVT |
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|
|
|
Motif ID: |
UP00082 |
Motif name: |
Zfp187_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
1 |
Number of overlap: |
7 |
Similarity score: |
0.000715028 |
Alignment:
HWATTAGTACATAV
-------TACASAR
Original motif |
Reverse complement motif |
Consensus sequence: BTATGTACTAATWH |
Consensus sequence: HWATTAGTACATAV |
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|
|
|
Motif ID: |
UP00193 |
Motif name: |
Rhox11_1765.2 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
7 |
Similarity score: |
0.00195524 |
Alignment:
WVVHWTWACAGCGBHBT
------TACASAR----
Original motif |
Reverse complement motif |
Consensus sequence: AVDVCGCTGTWAWDVVW |
Consensus sequence: WVVHWTWACAGCGBHBT |
|
|
|
|
Motif ID: |
UP00073 |
Motif name: |
Foxa2_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
7 |
Similarity score: |
0.0025777 |
Alignment:
HHWAWGTAAAYAAAVDB
------TACASAR----
Original motif |
Reverse complement motif |
Consensus sequence: HHWAWGTAAAYAAAVDB |
Consensus sequence: BDVTTTKTTTACWTWHH |
|
|
|
|
Dataset #: 1 |
Motif ID: 24 |
Motif name: Motif 24 |
Original motif |
Reverse complement motif |
Consensus sequence: CACGB |
Consensus sequence: BCGTG |
|
|
|
|
Best Matches for Motif ID 24 (Highest to Lowest)
Motif ID: |
UP00097 |
Motif name: |
Mtf1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
9 |
Number of overlap: |
5 |
Similarity score: |
0 |
Alignment:
DBDHCGTGTGCAAMDH
---BCGTG--------
Original motif |
Reverse complement motif |
Consensus sequence: DBDHCGTGTGCAAMDH |
Consensus sequence: HDYTTGCACACGDHBH |
|
|
|
|
Motif ID: |
UP00050 |
Motif name: |
Bhlhb2_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
11 |
Number of overlap: |
5 |
Similarity score: |
0.0184689 |
Alignment:
YDYBDHTMCACGTGGADDBMDGT
--------CACGB----------
Original motif |
Reverse complement motif |
Consensus sequence: YDYBDHTMCACGTGGADDBMDGT |
Consensus sequence: ACHRBHDTCCACGTGYAHHBMHM |
|
|
|
|
Motif ID: |
UP00050 |
Motif name: |
Bhlhb2_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
10 |
Number of overlap: |
5 |
Similarity score: |
0.0193222 |
Alignment:
RDHDBVDTCACGTGASBHVHDH
--------CACGB---------
Original motif |
Reverse complement motif |
Consensus sequence: RDHDBVDTCACGTGASBHVHDH |
Consensus sequence: DDHBHBSTCACGTGAHBBDHHM |
|
|
|
|
Motif ID: |
UP00060 |
Motif name: |
Max_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
7 |
Number of overlap: |
5 |
Similarity score: |
0.0231779 |
Alignment:
HHVBABCACGTGSTHD
------CACGB-----
Original motif |
Reverse complement motif |
Consensus sequence: DDASCACGTGBTBVDD |
Consensus sequence: HHVBABCACGTGSTHD |
|
|
|
|
Motif ID: |
UP00060 |
Motif name: |
Max_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
5 |
Similarity score: |
0.02459 |
Alignment:
BBGHCACGCGACDD
----CACGB-----
Original motif |
Reverse complement motif |
Consensus sequence: BBGHCACGCGACDD |
Consensus sequence: HDGTCGCGTGDCVB |
|
|
|
|
Dataset #: 1 |
Motif ID: 25 |
Motif name: Motif 25 |
Original motif |
Reverse complement motif |
Consensus sequence: TTTAWW |
Consensus sequence: WWTAAA |
|
|
|
|
Best Matches for Motif ID 25 (Highest to Lowest)
Motif ID: |
UP00180 |
Motif name: |
Hoxd13 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
6 |
Similarity score: |
0 |
Alignment:
HDHHTTTTATTKKHDD
-----TTTAWW-----
Original motif |
Reverse complement motif |
Consensus sequence: HDHYYAATAAAAHHHH |
Consensus sequence: HDHHTTTTATTKKHDD |
|
|
|
|
Motif ID: |
UP00134 |
Motif name: |
Hoxb13 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
6 |
Similarity score: |
0.00930561 |
Alignment:
VRHCCAATAAAAWHHV
-----WWTAAA-----
Original motif |
Reverse complement motif |
Consensus sequence: VRHCCAATAAAAWHHV |
Consensus sequence: VDHWTTTTATTGGDKB |
|
|
|
|
Motif ID: |
UP00121 |
Motif name: |
Hoxd10 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
6 |
Similarity score: |
0.0106116 |
Alignment:
VDKVYAATAAAATDDDH
-----WWTAAA------
Original motif |
Reverse complement motif |
Consensus sequence: VDKVYAATAAAATDDDH |
Consensus sequence: HDDDATTTTATTKVRDB |
|
|
|
|
Motif ID: |
UP00061 |
Motif name: |
Foxl1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
6 |
Similarity score: |
0.0135319 |
Alignment:
VVVWTTGTTTAMATTWD
-------TTTAWW----
Original motif |
Reverse complement motif |
Consensus sequence: DWAATRTAAACAAWVVB |
Consensus sequence: VVVWTTGTTTAMATTWD |
|
|
|
|
Motif ID: |
UP00133 |
Motif name: |
Cdx2 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
6 |
Similarity score: |
0.0138323 |
Alignment:
HRHTTTTATYMCCVBD
----TTTAWW------
Original motif |
Reverse complement motif |
Consensus sequence: DVVGGYMATAAAAHKH |
Consensus sequence: HRHTTTTATYMCCVBD |
|
|
|
|
Dataset #: 1 |
Motif ID: 26 |
Motif name: Motif 26 |
Original motif |
Reverse complement motif |
Consensus sequence: RGARGAAA |
Consensus sequence: TTTCKTCK |
|
|
|
|
Best Matches for Motif ID 26 (Highest to Lowest)
Motif ID: |
UP00074 |
Motif name: |
Isgf3g_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
TDAGTTTCGWTTKDV
----TTTCKTCK---
Original motif |
Reverse complement motif |
Consensus sequence: VDRAAWCGAAACTDA |
Consensus sequence: TDAGTTTCGWTTKDV |
|
|
|
|
Motif ID: |
UP00040 |
Motif name: |
Irf5_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.000164051 |
Alignment:
BDKGTTTCGKTWDDD
----TTTCKTCK---
Original motif |
Reverse complement motif |
Consensus sequence: DDDWAYCGAAACYDV |
Consensus sequence: BDKGTTTCGKTWDDD |
|
|
|
|
Motif ID: |
UP00062 |
Motif name: |
Sox4_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.00378534 |
Alignment:
HHBBMCTTTGTTHDDBH
------TTTCKTCK---
Original motif |
Reverse complement motif |
Consensus sequence: HBDDDAACAAAGRVBHH |
Consensus sequence: HHBBMCTTTGTTHDDBH |
|
|
|
|
Motif ID: |
UP00067 |
Motif name: |
Lef1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.00434344 |
Alignment:
DDDYCCTTTGATCTDDV
------TTTCKTCK---
Original motif |
Reverse complement motif |
Consensus sequence: DDDYCCTTTGATCTDDV |
Consensus sequence: VDDAGATCAAAGGKDDD |
|
|
|
|
Motif ID: |
UP00030 |
Motif name: |
Sox11_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.00478756 |
Alignment:
HHBTMCTTTGTTMDDVH
------TTTCKTCK---
Original motif |
Reverse complement motif |
Consensus sequence: HBDDRAACAAAGRABHH |
Consensus sequence: HHBTMCTTTGTTMDDVH |
|
|
|
|
Dataset #: 1 |
Motif ID: 27 |
Motif name: Motif 27 |
Original motif |
Reverse complement motif |
Consensus sequence: CTGCCTKY |
Consensus sequence: KRAGGCAG |
|
|
|
|
Best Matches for Motif ID 27 (Highest to Lowest)
Motif ID: |
UP00031 |
Motif name: |
Zbtb3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
DDBBBCACTGCABTBBB
-------CTGCCTKY--
Original motif |
Reverse complement motif |
Consensus sequence: DDBBBCACTGCABTBBB |
Consensus sequence: BBBAVTGCAGTGBBVDD |
|
|
|
|
Motif ID: |
UP00092 |
Motif name: |
Myb_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0.00277335 |
Alignment:
BDACCAACTGCCRBBH
-------CTGCCTKY-
Original motif |
Reverse complement motif |
Consensus sequence: BDACCAACTGCCRBBH |
Consensus sequence: DBVKGGCAGTTGGTHB |
|
|
|
|
Motif ID: |
UP00045 |
Motif name: |
Mafb_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.00419316 |
Alignment:
DMTWDGTCAGCADWTTH
--KRAGGCAG-------
Original motif |
Reverse complement motif |
Consensus sequence: HAAWDTGCTGACDWARH |
Consensus sequence: DMTWDGTCAGCADWTTH |
|
|
|
|
Motif ID: |
UP00081 |
Motif name: |
Mybl1_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
1 |
Number of overlap: |
8 |
Similarity score: |
0.00632134 |
Alignment:
BHCGGCAGTTGGBBB
KRAGGCAG-------
Original motif |
Reverse complement motif |
Consensus sequence: BBVCCAACTGCCGHB |
Consensus sequence: BHCGGCAGTTGGBBB |
|
|
|
|
Motif ID: |
UP00010 |
Motif name: |
Tcfap2b_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
7 |
Number of overlap: |
8 |
Similarity score: |
0.00866202 |
Alignment:
DYGCCYBARGGCAH
------KRAGGCAG
Original motif |
Reverse complement motif |
Consensus sequence: DYGCCYBARGGCAH |
Consensus sequence: HTGCCMTVKGGCMD |
|
|
|
|
Dataset #: 1 |
Motif ID: 28 |
Motif name: Motif 28 |
Original motif |
Reverse complement motif |
Consensus sequence: AVAGAAA |
Consensus sequence: TTTCTVT |
|
|
|
|
Best Matches for Motif ID 28 (Highest to Lowest)
Motif ID: |
UP00074 |
Motif name: |
Isgf3g_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
7 |
Similarity score: |
0 |
Alignment:
TDAGTTTCGWTTKDV
----TTTCTVT----
Original motif |
Reverse complement motif |
Consensus sequence: VDRAAWCGAAACTDA |
Consensus sequence: TDAGTTTCGWTTKDV |
|
|
|
|
Motif ID: |
UP00018 |
Motif name: |
Irf4_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0.0019906 |
Alignment:
TBDKGTTTCGMTDHV
-----TTTCTVT---
Original motif |
Reverse complement motif |
Consensus sequence: VDDAYCGAAACYDVA |
Consensus sequence: TBDKGTTTCGMTDHV |
|
|
|
|
Motif ID: |
UP00040 |
Motif name: |
Irf5_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
7 |
Similarity score: |
0.00322534 |
Alignment:
BDKGTTTCGKTWDDD
----TTTCTVT----
Original motif |
Reverse complement motif |
Consensus sequence: DDDWAYCGAAACYDV |
Consensus sequence: BDKGTTTCGKTWDDD |
|
|
|
|
Motif ID: |
UP00011 |
Motif name: |
Irf6_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
7 |
Similarity score: |
0.00827965 |
Alignment:
DHDBTKGTTTCGHTHDD
-------TTTCTVT---
Original motif |
Reverse complement motif |
Consensus sequence: HDDAHCGAAACYAVDDD |
Consensus sequence: DHDBTKGTTTCGHTHDD |
|
|
|
|
Motif ID: |
UP00086 |
Motif name: |
Irf3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
7 |
Similarity score: |
0.0115602 |
Alignment:
BARAAHSGAAACYV
----AVAGAAA---
Original motif |
Reverse complement motif |
Consensus sequence: BARAAHSGAAACYV |
Consensus sequence: VMGTTTCSDTTMTB |
|
|
|
|
Dataset #: 1 |
Motif ID: 29 |
Motif name: Motif 29 |
Original motif |
Reverse complement motif |
Consensus sequence: CCMGCCCC |
Consensus sequence: GGGGCYGG |
|
|
|
|
Best Matches for Motif ID 29 (Highest to Lowest)
Motif ID: |
UP00002 |
Motif name: |
Sp4_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
7 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
BDHHMCGCCCCCTHVBB
---CCMGCCCC------
Original motif |
Reverse complement motif |
Consensus sequence: BDHHMCGCCCCCTHVBB |
Consensus sequence: BVVHAGGGGGCGRDHHB |
|
|
|
|
Motif ID: |
UP00021 |
Motif name: |
Zfp281_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.000996799 |
Alignment:
DBCCCCCCCCCCMYC
---CCMGCCCC----
Original motif |
Reverse complement motif |
Consensus sequence: DBCCCCCCCCCCMYC |
Consensus sequence: GKRGGGGGGGGGGBD |
|
|
|
|
Motif ID: |
UP00093 |
Motif name: |
Klf7_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.00552479 |
Alignment:
HBDRCCMCGCCCHHHD
-----CCMGCCCC---
Original motif |
Reverse complement motif |
Consensus sequence: HBDRCCMCGCCCHHHD |
Consensus sequence: DHHDGGGCGRGGKHBH |
|
|
|
|
Motif ID: |
UP00007 |
Motif name: |
Egr1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
1 |
Number of overlap: |
8 |
Similarity score: |
0.00785177 |
Alignment:
HCCGCCCCCGCAHB
CCMGCCCC------
Original motif |
Reverse complement motif |
Consensus sequence: HCCGCCCCCGCAHB |
Consensus sequence: VHTGCGGGGGCGGH |
|
|
|
|
Motif ID: |
UP00022 |
Motif name: |
Zfp740_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.0188994 |
Alignment:
HVBCCCCCCCCMHHHB
---CCMGCCCC-----
Original motif |
Reverse complement motif |
Consensus sequence: HVBCCCCCCCCMHHHB |
Consensus sequence: BHHDYGGGGGGGGBVD |
|
|
|
|
Dataset #: 1 |
Motif ID: 30 |
Motif name: Motif 30 |
Original motif |
Reverse complement motif |
Consensus sequence: CAGGARGM |
Consensus sequence: YCMTCCTG |
|
|
|
|
Best Matches for Motif ID 30 (Highest to Lowest)
Motif ID: |
UP00102 |
Motif name: |
Zic1_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
BHDCVCAGCAGGHVD
-----CAGGARGM--
Original motif |
Reverse complement motif |
Consensus sequence: BHDCVCAGCAGGHVD |
Consensus sequence: DVHCCTGCTGBGDDB |
|
|
|
|
Motif ID: |
UP00006 |
Motif name: |
Zic3_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.00147653 |
Alignment:
DDDCACAGCAKGHVD
-----CAGGARGM--
Original motif |
Reverse complement motif |
Consensus sequence: DDDCACAGCAKGHVD |
Consensus sequence: DVHCYTGCTGTGHDH |
|
|
|
|
Motif ID: |
UP00057 |
Motif name: |
Zic2_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.00420108 |
Alignment:
HHDCVCAGCAKGVVD
-----CAGGARGM--
Original motif |
Reverse complement motif |
Consensus sequence: HHDCVCAGCAKGVVD |
Consensus sequence: DVBCYTGCTGBGDDD |
|
|
|
|
Motif ID: |
UP00420 |
Motif name: |
Elk3 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.00964839 |
Alignment:
DVBBACCGGAAGYDVVV
-----CAGGARGM----
Original motif |
Reverse complement motif |
Consensus sequence: DVBBACCGGAAGYDVVV |
Consensus sequence: VBVDMCTTCCGGTVBVD |
|
|
|
|
Motif ID: |
UP00421 |
Motif name: |
Etv1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.0118889 |
Alignment:
MVHBACCGGAAGTVDVH
-----CAGGARGM----
Original motif |
Reverse complement motif |
Consensus sequence: MVHBACCGGAAGTVDVH |
Consensus sequence: HBDBACTTCCGGTBHVY |
|
|
|
|
Dataset #: 1 |
Motif ID: 31 |
Motif name: Motif 31 |
Original motif |
Reverse complement motif |
Consensus sequence: CTGWSCTC |
Consensus sequence: GAGSWCAG |
|
|
|
|
Best Matches for Motif ID 31 (Highest to Lowest)
Motif ID: |
UP00095 |
Motif name: |
Zfp691_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
DDHBYGAGCACTGBHHB
-----GAGSWCAG----
Original motif |
Reverse complement motif |
Consensus sequence: BDHVCAGTGCTCMBHDD |
Consensus sequence: DDHBYGAGCACTGBHHB |
|
|
|
|
Motif ID: |
UP00079 |
Motif name: |
Esrra_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.0111158 |
Alignment:
VKBBAGGGGTCAHDBBH
-----GAGSWCAG----
Original motif |
Reverse complement motif |
Consensus sequence: VKBBAGGGGTCAHDBBH |
Consensus sequence: DBBHHTGACCCCTBBYV |
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Motif ID: |
UP00048 |
Motif name: |
Rara |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.0141173 |
Alignment:
DHBHAAAGGTCACVHD
-----GAGSWCAG---
Original motif |
Reverse complement motif |
Consensus sequence: DHBHAAAGGTCACVHD |
Consensus sequence: HHVGTGACCTTTDVDD |
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Motif ID: |
UP00020 |
Motif name: |
Atf1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.014652 |
Alignment:
DMDMTGACGTCAKHBD
-----GAGSWCAG---
Original motif |
Reverse complement motif |
Consensus sequence: DBDRTGACGTCAYHRD |
Consensus sequence: DMDMTGACGTCAKHBD |
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Motif ID: |
UP00053 |
Motif name: |
Rxra_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.0149745 |
Alignment:
DBHBDTGACCCCDHVHB
----CTGWSCTC-----
Original motif |
Reverse complement motif |
Consensus sequence: DBHBDTGACCCCDHVHB |
Consensus sequence: VHBHDGGGGTCAHBHBD |
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Dataset #: 1 |
Motif ID: 32 |
Motif name: Motif 32 |
Original motif |
Reverse complement motif |
Consensus sequence: AVATGGC |
Consensus sequence: GCCATVT |
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Best Matches for Motif ID 32 (Highest to Lowest)
Motif ID: |
UP00046 |
Motif name: |
Tcfe2a_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
7 |
Number of overlap: |
7 |
Similarity score: |
0 |
Alignment:
HVDDVCAGATGKYHBBV
------AVATGGC----
Original motif |
Reverse complement motif |
Consensus sequence: HVDDVCAGATGKYHBBV |
Consensus sequence: VBBDMYCATCTGVHHBH |
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Motif ID: |
UP00010 |
Motif name: |
Tcfap2b_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0.0136194 |
Alignment:
HTGCCMTVKGGCMD
--GCCATVT-----
Original motif |
Reverse complement motif |
Consensus sequence: DYGCCYBARGGCAH |
Consensus sequence: HTGCCMTVKGGCMD |
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Motif ID: |
UP00035 |
Motif name: |
Hic1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
9 |
Number of overlap: |
7 |
Similarity score: |
0.0137364 |
Alignment:
DDBHGGTTGGCATVBD
--------GCCATVT-
Original motif |
Reverse complement motif |
Consensus sequence: DBBATGCCAACCHVHH |
Consensus sequence: DDBHGGTTGGCATVBD |
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Motif ID: |
UP00186 |
Motif name: |
Meis1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
7 |
Similarity score: |
0.015326 |
Alignment:
WAVBASCTGTCAAWVH
----AVATGGC-----
Original motif |
Reverse complement motif |
Consensus sequence: WAVBASCTGTCAAWVH |
Consensus sequence: DBWTTGACAGSTBVTW |
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Motif ID: |
UP00527 |
Motif name: |
Foxn4_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0.015763 |
Alignment:
TCDAMVBGACGCMAKDDDVBBD
----------GCCATVT-----
Original motif |
Reverse complement motif |
Consensus sequence: DBBVDDDRTRGCGTCBBYTHGA |
Consensus sequence: TCDAMVBGACGCMAKDDDVBBD |
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Dataset #: 1 |
Motif ID: 33 |
Motif name: Motif 33 |
Original motif |
Reverse complement motif |
Consensus sequence: CMTTTCC |
Consensus sequence: GGAAARG |
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Best Matches for Motif ID 33 (Highest to Lowest)
Motif ID: |
UP00424 |
Motif name: |
Gm4881 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
7 |
Similarity score: |
0 |
Alignment:
VBBHAYTTCCGGTDDD
---CMTTTCC------
Original motif |
Reverse complement motif |
Consensus sequence: VBBHAYTTCCGGTDDD |
Consensus sequence: DHDACCGGAAMTHBVB |
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Motif ID: |
UP00411 |
Motif name: |
Erg |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
7 |
Similarity score: |
0.000621119 |
Alignment:
VBBVAYTTCCGGTDDB
---CMTTTCC------
Original motif |
Reverse complement motif |
Consensus sequence: VBBVAYTTCCGGTDDB |
Consensus sequence: BDDACCGGAAKTVBVB |
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Motif ID: |
UP00416 |
Motif name: |
Fli1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
7 |
Similarity score: |
0.00145577 |
Alignment:
VBBVAYTTCCGGTDDH
---CMTTTCC------
Original motif |
Reverse complement motif |
Consensus sequence: VBBVAYTTCCGGTDDH |
Consensus sequence: DHDACCGGAAKTBBVV |
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Motif ID: |
UP00422 |
Motif name: |
Etv3 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
7 |
Similarity score: |
0.00170257 |
Alignment:
VBBHAYTTCCGGTHDH
---CMTTTCC------
Original motif |
Reverse complement motif |
Consensus sequence: VBBHAYTTCCGGTHDH |
Consensus sequence: DHHACCGGAAKTHBBB |
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Motif ID: |
UP00418 |
Motif name: |
Etv6 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
7 |
Number of overlap: |
7 |
Similarity score: |
0.00598804 |
Alignment:
DVHBTACTTCCGGHTHB
----CMTTTCC------
Original motif |
Reverse complement motif |
Consensus sequence: DVHBTACTTCCGGHTHB |
Consensus sequence: BHAHCCGGAAGTABDVD |
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Dataset #: 1 |
Motif ID: 34 |
Motif name: Motif 34 |
Original motif |
Reverse complement motif |
Consensus sequence: ATATTTA |
Consensus sequence: TAAATAT |
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Best Matches for Motif ID 34 (Highest to Lowest)
Motif ID: |
UP00059 |
Motif name: |
Arid5a_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
7 |
Similarity score: |
0 |
Alignment:
VYAATATTGVDADH
---ATATTTA----
Original motif |
Reverse complement motif |
Consensus sequence: VYAATATTGVDADH |
Consensus sequence: HDTDVCAATATTMV |
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Motif ID: |
UP00073 |
Motif name: |
Foxa2_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
7 |
Similarity score: |
0.00064316 |
Alignment:
HHWAWGTAAAYAAAVDB
------TAAATAT----
Original motif |
Reverse complement motif |
Consensus sequence: HHWAWGTAAAYAAAVDB |
Consensus sequence: BDVTTTKTTTACWTWHH |
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Motif ID: |
UP00108 |
Motif name: |
Alx3 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0.00321096 |
Alignment:
VHVAKMTAATTAKTHBW
-----ATATTTA-----
Original motif |
Reverse complement motif |
Consensus sequence: WVHAYTAATTARYTVHV |
Consensus sequence: VHVAKMTAATTAKTHBW |
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Motif ID: |
UP00154 |
Motif name: |
Dlx3 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0.00327881 |
Alignment:
BHVVDATAATTACMVHH
-----ATATTTA-----
Original motif |
Reverse complement motif |
Consensus sequence: BHVVDATAATTACMVHH |
Consensus sequence: DHVRGTAATTATHVVDV |
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Motif ID: |
UP00061 |
Motif name: |
Foxl1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
7 |
Number of overlap: |
7 |
Similarity score: |
0.00408089 |
Alignment:
DWAATRTAAACAAWVVB
------TAAATAT----
Original motif |
Reverse complement motif |
Consensus sequence: DWAATRTAAACAAWVVB |
Consensus sequence: VVVWTTGTTTAMATTWD |
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Dataset #: 1 |
Motif ID: 35 |
Motif name: Motif 35 |
Original motif |
Reverse complement motif |
Consensus sequence: KGCTGGS |
Consensus sequence: SCCAGCR |
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Best Matches for Motif ID 35 (Highest to Lowest)
Motif ID: |
UP00057 |
Motif name: |
Zic2_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
7 |
Similarity score: |
0 |
Alignment:
DVBCYTGCTGBGDDD
-----KGCTGGS---
Original motif |
Reverse complement motif |
Consensus sequence: HHDCVCAGCAKGVVD |
Consensus sequence: DVBCYTGCTGBGDDD |
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Motif ID: |
UP00006 |
Motif name: |
Zic3_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
7 |
Similarity score: |
0.000909168 |
Alignment:
DVHCYTGCTGTGHDH
-----KGCTGGS---
Original motif |
Reverse complement motif |
Consensus sequence: DDDCACAGCAKGHVD |
Consensus sequence: DVHCYTGCTGTGHDH |
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Motif ID: |
UP00102 |
Motif name: |
Zic1_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
7 |
Similarity score: |
0.00192341 |
Alignment:
DVHCCTGCTGBGDDB
-----KGCTGGS---
Original motif |
Reverse complement motif |
Consensus sequence: BHDCVCAGCAGGHVD |
Consensus sequence: DVHCCTGCTGBGDDB |
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Motif ID: |
UP00035 |
Motif name: |
Hic1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0.00396963 |
Alignment:
DDBHGGTTGGCATVBD
----KGCTGGS-----
Original motif |
Reverse complement motif |
Consensus sequence: DBBATGCCAACCHVHH |
Consensus sequence: DDBHGGTTGGCATVBD |
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Motif ID: |
UP00045 |
Motif name: |
Mafb_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0.010167 |
Alignment:
DMTWDGTCAGCADWTTH
-----SCCAGCR-----
Original motif |
Reverse complement motif |
Consensus sequence: HAAWDTGCTGACDWARH |
Consensus sequence: DMTWDGTCAGCADWTTH |
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Dataset #: 1 |
Motif ID: 36 |
Motif name: Motif 36 |
Original motif |
Reverse complement motif |
Consensus sequence: CATGGTGG |
Consensus sequence: CCACCATG |
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Best Matches for Motif ID 36 (Highest to Lowest)
Motif ID: |
UP00539 |
Motif name: |
Gli2_v015681_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
11 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
CBDMCMGGGTGGTCCHVBVBAH
----CATGGTGG----------
Original motif |
Reverse complement motif |
Consensus sequence: HTBVVVDGGACCACCCRGRDBG |
Consensus sequence: CBDMCMGGGTGGTCCHVBVBAH |
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Motif ID: |
UP00538 |
Motif name: |
Gli1_v016060_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
10 |
Number of overlap: |
8 |
Similarity score: |
0.00612072 |
Alignment:
HGDHVHKGACCACCCGGBGBGDB
---------CCACCATG------
Original motif |
Reverse complement motif |
Consensus sequence: BHCBCBCCGGGTGGTCYHVHDCH |
Consensus sequence: HGDHVHKGACCACCCGGBGBGDB |
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Motif ID: |
UP00047 |
Motif name: |
Zbtb7b_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0.0105198 |
Alignment:
BDDRVGACCACCHBDVB
-------CCACCATG--
Original motif |
Reverse complement motif |
Consensus sequence: BDDRVGACCACCHBDVB |
Consensus sequence: BBDVHGGTGGTCBKDDB |
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Motif ID: |
UP00540 |
Motif name: |
Gli3_v016060_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
11 |
Number of overlap: |
8 |
Similarity score: |
0.013412 |
Alignment:
CVHBSCGGGTGGTCMHVHHCDH
----CATGGTGG----------
Original motif |
Reverse complement motif |
Consensus sequence: HDGHHBHRGACCACCCGSVDVG |
Consensus sequence: CVHBSCGGGTGGTCMHVHHCDH |
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Motif ID: |
UP00540 |
Motif name: |
Gli3_v015681_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
7 |
Number of overlap: |
8 |
Similarity score: |
0.0205127 |
Alignment:
DVTTVVCVYGGHGGYCHHDMYB
------CATGGTGG--------
Original motif |
Reverse complement motif |
Consensus sequence: DVTTVVCVYGGHGGYCHHDMYB |
Consensus sequence: VMYDHDGMCCHCCKBGVVAAVH |
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Dataset #: 1 |
Motif ID: 37 |
Motif name: Motif 37 |
Original motif |
Reverse complement motif |
Consensus sequence: GYATGTGY |
Consensus sequence: KCACATKC |
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Best Matches for Motif ID 37 (Highest to Lowest)
Motif ID: |
UP00042 |
Motif name: |
Gm397_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
HHRTATGTGCACATHHD
--GYATGTGY-------
Original motif |
Reverse complement motif |
Consensus sequence: HHDATGTGCACATAMDH |
Consensus sequence: HHRTATGTGCACATHHD |
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Motif ID: |
UP00042 |
Motif name: |
Gm397_second |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.00557849 |
Alignment:
HBGYGTGTGTGCVRVD
----GYATGTGY----
Original motif |
Reverse complement motif |
Consensus sequence: DVMVGCACACACKCVH |
Consensus sequence: HBGYGTGTGTGCVRVD |
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Motif ID: |
UP00050 |
Motif name: |
Bhlhb2_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0.0130509 |
Alignment:
RDHDBVDTCACGTGASBHVHDH
-------KCACATKC-------
Original motif |
Reverse complement motif |
Consensus sequence: RDHDBVDTCACGTGASBHVHDH |
Consensus sequence: DDHBHBSTCACGTGAHBBDHHM |
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Motif ID: |
UP00026 |
Motif name: |
Zscan4_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
2 |
Number of overlap: |
8 |
Similarity score: |
0.0145166 |
Alignment:
HDHTMTGTGCACADVHD
--------KCACATKC-
Original motif |
Reverse complement motif |
Consensus sequence: DHVDTGTGCACAYAHDH |
Consensus sequence: HDHTMTGTGCACADVHD |
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Motif ID: |
UP00046 |
Motif name: |
Tcfe2a_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.0157001 |
Alignment:
DHDBHGCACCTGBDDVB
-----KCACATKC----
Original motif |
Reverse complement motif |
Consensus sequence: VBHHVCAGGTGCDVDHD |
Consensus sequence: DHDBHGCACCTGBDDVB |
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Dataset #: 1 |
Motif ID: 38 |
Motif name: Motif 38 |
Original motif |
Reverse complement motif |
Consensus sequence: CCTYCTCC |
Consensus sequence: GGAGMAGG |
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Best Matches for Motif ID 38 (Highest to Lowest)
Motif ID: |
UP00082 |
Motif name: |
Zfp187_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
DDGMCCTBGTCCHYHV
----CCTYCTCC----
Original motif |
Reverse complement motif |
Consensus sequence: DDGMCCTBGTCCHYHV |
Consensus sequence: VHMDGGACVAGGRCDH |
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|
|
Motif ID: |
UP00021 |
Motif name: |
Zfp281_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.0171216 |
Alignment:
DBCCCCCCCCCCMYC
---CCTYCTCC----
Original motif |
Reverse complement motif |
Consensus sequence: DBCCCCCCCCCCMYC |
Consensus sequence: GKRGGGGGGGGGGBD |
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|
|
Motif ID: |
UP00102 |
Motif name: |
Zic1_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.0279988 |
Alignment:
BHDCVCAGCAGGHVD
----GGAGMAGG---
Original motif |
Reverse complement motif |
Consensus sequence: BHDCVCAGCAGGHVD |
Consensus sequence: DVHCCTGCTGBGDDB |
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|
|
Motif ID: |
UP00539 |
Motif name: |
Gli2_v015681_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.0293564 |
Alignment:
DVMHHDHKGACCCTCCTSVCBH
-----------CCTYCTCC---
Original motif |
Reverse complement motif |
Consensus sequence: HVGVSAGGAGGGTCYHHHHYVH |
Consensus sequence: DVMHHDHKGACCCTCCTSVCBH |
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|
|
|
Motif ID: |
UP00057 |
Motif name: |
Zic2_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.0307412 |
Alignment:
HHDCVCAGCAKGVVD
----GGAGMAGG---
Original motif |
Reverse complement motif |
Consensus sequence: HHDCVCAGCAKGVVD |
Consensus sequence: DVBCYTGCTGBGDDD |
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Dataset #: 1 |
Motif ID: 39 |
Motif name: Motif 39 |
Original motif |
Reverse complement motif |
Consensus sequence: ACAGMCAG |
Consensus sequence: CTGYCTGT |
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Best Matches for Motif ID 39 (Highest to Lowest)
Motif ID: |
UP00000 |
Motif name: |
Smad3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
HDHDDCCAGACABBHVH
-----ACAGMCAG----
Original motif |
Reverse complement motif |
Consensus sequence: HDHDDCCAGACABBHVH |
Consensus sequence: HVHBVTGTCTGGDDHDD |
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Motif ID: |
UP00205 |
Motif name: |
Pknox2 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
7 |
Number of overlap: |
8 |
Similarity score: |
0.0021284 |
Alignment:
VHATTGACAGSKSVTH
--ACAGMCAG------
Original motif |
Reverse complement motif |
Consensus sequence: HAVSRSCTGTCAATHB |
Consensus sequence: VHATTGACAGSKSVTH |
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Motif ID: |
UP00092 |
Motif name: |
Myb_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
7 |
Number of overlap: |
8 |
Similarity score: |
0.00279845 |
Alignment:
BDACCAACTGCCRBBH
------ACAGMCAG--
Original motif |
Reverse complement motif |
Consensus sequence: BDACCAACTGCCRBBH |
Consensus sequence: DBVKGGCAGTTGGTHB |
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Motif ID: |
UP00258 |
Motif name: |
Tgif2 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.00437554 |
Alignment:
VBWTTGACAGCTVBTT
------ACAGMCAG--
Original motif |
Reverse complement motif |
Consensus sequence: AABBAGCTGTCAAWVV |
Consensus sequence: VBWTTGACAGCTVBTT |
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Motif ID: |
UP00122 |
Motif name: |
Tgif1 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.0048776 |
Alignment:
DBVVAGCTGTCAWWVTH
------CTGYCTGT---
Original motif |
Reverse complement motif |
Consensus sequence: DABWWTGACAGCTVVBD |
Consensus sequence: DBVVAGCTGTCAWWVTH |
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Dataset #: 1 |
Motif ID: 40 |
Motif name: Motif 40 |
Original motif |
Reverse complement motif |
Consensus sequence: CCACASC |
Consensus sequence: GSTGTGG |
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Best Matches for Motif ID 40 (Highest to Lowest)
Motif ID: |
UP00068 |
Motif name: |
Eomes_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0 |
Alignment:
BVHDAGGTGTGAAAHHH
-----GSTGTGG-----
Original motif |
Reverse complement motif |
Consensus sequence: BVHDAGGTGTGAAAHHH |
Consensus sequence: HHHTTTCACACCTDHBV |
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Motif ID: |
UP00102 |
Motif name: |
Zic1_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
7 |
Similarity score: |
0.00152086 |
Alignment:
DVHCCTGCTGBGDDB
------GSTGTGG--
Original motif |
Reverse complement motif |
Consensus sequence: BHDCVCAGCAGGHVD |
Consensus sequence: DVHCCTGCTGBGDDB |
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Motif ID: |
UP00093 |
Motif name: |
Klf7_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0.00208498 |
Alignment:
HBDRCCMCGCCCHHHD
----CCACASC-----
Original motif |
Reverse complement motif |
Consensus sequence: HBDRCCMCGCCCHHHD |
Consensus sequence: DHHDGGGCGRGGKHBH |
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Motif ID: |
UP00068 |
Motif name: |
Eomes_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0.00280198 |
Alignment:
VVBVCKACACCTHVBV
----CCACASC-----
Original motif |
Reverse complement motif |
Consensus sequence: VBVDAGGTGTYGVBBV |
Consensus sequence: VVBVCKACACCTHVBV |
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Motif ID: |
UP00057 |
Motif name: |
Zic2_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
7 |
Number of overlap: |
7 |
Similarity score: |
0.00486301 |
Alignment:
DVBCYTGCTGBGDDD
------GSTGTGG--
Original motif |
Reverse complement motif |
Consensus sequence: HHDCVCAGCAKGVVD |
Consensus sequence: DVBCYTGCTGBGDDD |
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Dataset #: 1 |
Motif ID: 41 |
Motif name: Motif 41 |
Original motif |
Reverse complement motif |
Consensus sequence: CTCAGARA |
Consensus sequence: TKTCTGAG |
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Best Matches for Motif ID 41 (Highest to Lowest)
Motif ID: |
UP00173 |
Motif name: |
Hoxc13 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
HHDBCTCRTAAAAWHD
----CTCAGARA----
Original motif |
Reverse complement motif |
Consensus sequence: HHDBCTCRTAAAAWHD |
Consensus sequence: DHWTTTTAMGAGBDHH |
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Motif ID: |
UP00183 |
Motif name: |
Hoxa13 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.00055063 |
Alignment:
HDHBCTCGTAAAAWBD
----CTCAGARA----
Original motif |
Reverse complement motif |
Consensus sequence: HDHBCTCGTAAAAWBD |
Consensus sequence: DVWTTTTACGAGBHDH |
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Motif ID: |
UP00006 |
Motif name: |
Zic3_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.0111384 |
Alignment:
DVHCYTGCTGTGHDH
----TKTCTGAG---
Original motif |
Reverse complement motif |
Consensus sequence: DDDCACAGCAKGHVD |
Consensus sequence: DVHCYTGCTGTGHDH |
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Motif ID: |
UP00000 |
Motif name: |
Smad3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.0116539 |
Alignment:
HVHBVTGTCTGGDDHDD
-----TKTCTGAG----
Original motif |
Reverse complement motif |
Consensus sequence: HDHDDCCAGACABBHVH |
Consensus sequence: HVHBVTGTCTGGDDHDD |
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Motif ID: |
UP00057 |
Motif name: |
Zic2_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.0135011 |
Alignment:
DVBCYTGCTGBGDDD
----TKTCTGAG---
Original motif |
Reverse complement motif |
Consensus sequence: HHDCVCAGCAKGVVD |
Consensus sequence: DVBCYTGCTGBGDDD |
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Dataset #: 1 |
Motif ID: 42 |
Motif name: Motif 42 |
Original motif |
Reverse complement motif |
Consensus sequence: CCYAGAAC |
Consensus sequence: GTTCTKGG |
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Best Matches for Motif ID 42 (Highest to Lowest)
Motif ID: |
UP00019 |
Motif name: |
Zbtb12_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
BBGATCTAGAACBKHDB
----CCYAGAAC-----
Original motif |
Reverse complement motif |
Consensus sequence: BDHRBGTTCTAGATCVB |
Consensus sequence: BBGATCTAGAACBKHDB |
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Motif ID: |
UP00019 |
Motif name: |
Zbtb12_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.0290375 |
Alignment:
HVHCRTTAGAACBYD
----CCYAGAAC---
Original motif |
Reverse complement motif |
Consensus sequence: HVHCRTTAGAACBYD |
Consensus sequence: DKBGTTCTAAKGHBH |
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Motif ID: |
UP00039 |
Motif name: |
Foxj3_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.0420446 |
Alignment:
DVHWDTGTTWTGDTBDH
------GTTCTKGG---
Original motif |
Reverse complement motif |
Consensus sequence: HDBAHCAWAACADWDVD |
Consensus sequence: DVHWDTGTTWTGDTBDH |
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Motif ID: |
UP00000 |
Motif name: |
Smad3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.0435243 |
Alignment:
HVHBVTGTCTGGDDHDD
-----GTTCTKGG----
Original motif |
Reverse complement motif |
Consensus sequence: HDHDDCCAGACABBHVH |
Consensus sequence: HVHBVTGTCTGGDDHDD |
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Motif ID: |
UP00413 |
Motif name: |
Elf4 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.0440977 |
Alignment:
DBBHACTTCCGGKWTH
-----GTTCTKGG---
Original motif |
Reverse complement motif |
Consensus sequence: DBBHACTTCCGGKWTH |
Consensus sequence: HAWYCCGGAAGTHBBD |
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Dataset #: 1 |
Motif ID: 43 |
Motif name: Motif 43 |
Original motif |
Reverse complement motif |
Consensus sequence: CTCTGCCY |
Consensus sequence: KGGCAGAG |
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Best Matches for Motif ID 43 (Highest to Lowest)
Motif ID: |
UP00031 |
Motif name: |
Zbtb3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.00233137 |
Alignment:
DDBBBCACTGCABTBBB
-----CTCTGCCY----
Original motif |
Reverse complement motif |
Consensus sequence: DDBBBCACTGCABTBBB |
Consensus sequence: BBBAVTGCAGTGBBVDD |
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Motif ID: |
UP00035 |
Motif name: |
Hic1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0.010233 |
Alignment:
DDBHGGTTGGCATVBD
-------KGGCAGAG-
Original motif |
Reverse complement motif |
Consensus sequence: DBBATGCCAACCHVHH |
Consensus sequence: DDBHGGTTGGCATVBD |
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Motif ID: |
UP00093 |
Motif name: |
Klf7_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.0136504 |
Alignment:
DHHDGGGCGRGGKHBH
---KGGCAGAG-----
Original motif |
Reverse complement motif |
Consensus sequence: HBDRCCMCGCCCHHHD |
Consensus sequence: DHHDGGGCGRGGKHBH |
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Motif ID: |
UP00092 |
Motif name: |
Myb_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.0179013 |
Alignment:
DBVKGGCAGTTGGTHB
---KGGCAGAG-----
Original motif |
Reverse complement motif |
Consensus sequence: BDACCAACTGCCRBBH |
Consensus sequence: DBVKGGCAGTTGGTHB |
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Motif ID: |
UP00035 |
Motif name: |
Hic1_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.0198349 |
Alignment:
VHHDWTGGGCAMDHBH
------KGGCAGAG--
Original motif |
Reverse complement motif |
Consensus sequence: DBDDRTGCCCAWDHDV |
Consensus sequence: VHHDWTGGGCAMDHBH |
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Dataset #: 1 |
Motif ID: 44 |
Motif name: Motif 44 |
Original motif |
Reverse complement motif |
Consensus sequence: AGAAATG |
Consensus sequence: CATTTCT |
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Best Matches for Motif ID 44 (Highest to Lowest)
Motif ID: |
UP00118 |
Motif name: |
Pou4f3 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
7 |
Similarity score: |
0 |
Alignment:
HVTTATTAATKADKHC
----AGAAATG-----
Original motif |
Reverse complement motif |
Consensus sequence: HVTTATTAATKADKHC |
Consensus sequence: GHYHTYATTAATAAVH |
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Motif ID: |
UP00147 |
Motif name: |
Nkx2-6 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0.0027402 |
Alignment:
AAHVTTAAGTGGHTDD
----AGAAATG-----
Original motif |
Reverse complement motif |
Consensus sequence: DDADCCACTTAAVHTT |
Consensus sequence: AAHVTTAAGTGGHTDD |
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Motif ID: |
UP00044 |
Motif name: |
Mafk_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0.00356175 |
Alignment:
MBHTGCADTTTTTHV
-----CATTTCT---
Original motif |
Reverse complement motif |
Consensus sequence: VHAAAAADTGCAHBR |
Consensus sequence: MBHTGCADTTTTTHV |
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Motif ID: |
UP00055 |
Motif name: |
Hbp1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
7 |
Number of overlap: |
7 |
Similarity score: |
0.00569123 |
Alignment:
HHDWTSAATGAATDDB
---AGAAATG------
Original motif |
Reverse complement motif |
Consensus sequence: HHDWTSAATGAATDDB |
Consensus sequence: VDHATTCATTSAWDDH |
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Motif ID: |
UP00236 |
Motif name: |
Irx2 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
7 |
Similarity score: |
0.00626845 |
Alignment:
WDDDTACATGTADDWBW
---AGAAATG-------
Original motif |
Reverse complement motif |
Consensus sequence: WDDDTACATGTADDWBW |
Consensus sequence: WVWDDTACATGTADDDW |
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Dataset #: 1 |
Motif ID: 45 |
Motif name: Motif 45 |
Original motif |
Reverse complement motif |
Consensus sequence: ATTATTAW |
Consensus sequence: WTAATAAT |
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Best Matches for Motif ID 45 (Highest to Lowest)
Motif ID: |
UP00016 |
Motif name: |
Sry_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.00260392 |
Alignment:
VDDDATTATAATHDHV
----ATTATTAW----
Original motif |
Reverse complement motif |
Consensus sequence: BHDHATTATAATDDDV |
Consensus sequence: VDDDATTATAATHDHV |
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Motif ID: |
UP00146 |
Motif name: |
Pou6f1_1731.2 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.00439717 |
Alignment:
DHDASCTCATTAWVVHV
-----ATTATTAW----
Original motif |
Reverse complement motif |
Consensus sequence: VHVVWTAATGAGSTDDH |
Consensus sequence: DHDASCTCATTAWVVHV |
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Motif ID: |
UP00118 |
Motif name: |
Pou4f3 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
7 |
Number of overlap: |
8 |
Similarity score: |
0.00941819 |
Alignment:
GHYHTYATTAATAAVH
------ATTATTAW--
Original motif |
Reverse complement motif |
Consensus sequence: HVTTATTAATKADKHC |
Consensus sequence: GHYHTYATTAATAAVH |
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Motif ID: |
UP00146 |
Motif name: |
Pou6f1_3733.1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.0131321 |
Alignment:
DHDASCTCATTATVHHB
-----ATTATTAW----
Original motif |
Reverse complement motif |
Consensus sequence: VHHVATAATGAGSTDDH |
Consensus sequence: DHDASCTCATTATVHHB |
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Motif ID: |
UP00200 |
Motif name: |
Nkx6-1_2825.1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.015553 |
Alignment:
CBVMRTAATTAATTHBH
-------ATTATTAW--
Original motif |
Reverse complement motif |
Consensus sequence: DVHAATTAATTAMYBBG |
Consensus sequence: CBVMRTAATTAATTHBH |
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Dataset #: 1 |
Motif ID: 46 |
Motif name: Motif 46 |
Original motif |
Reverse complement motif |
Consensus sequence: GGAAASA |
Consensus sequence: TSTTTCC |
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Best Matches for Motif ID 46 (Highest to Lowest)
Motif ID: |
UP00073 |
Motif name: |
Foxa2_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0 |
Alignment:
BDVTTTKTTTACWTWHH
-----TSTTTCC-----
Original motif |
Reverse complement motif |
Consensus sequence: HHWAWGTAAAYAAAVDB |
Consensus sequence: BDVTTTKTTTACWTWHH |
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Motif ID: |
UP00025 |
Motif name: |
Foxk1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0.00624148 |
Alignment:
BBVTTTGTTTACATTDD
-----TSTTTCC-----
Original motif |
Reverse complement motif |
Consensus sequence: DDAATGTAAACAAAVVB |
Consensus sequence: BBVTTTGTTTACATTDD |
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|
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Motif ID: |
UP00061 |
Motif name: |
Foxl1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0.00652531 |
Alignment:
VVVWTTGTTTAMATTWD
-----TSTTTCC-----
Original motif |
Reverse complement motif |
Consensus sequence: DWAATRTAAACAAWVVB |
Consensus sequence: VVVWTTGTTTAMATTWD |
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Motif ID: |
UP00039 |
Motif name: |
Foxj3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0.00845848 |
Alignment:
DVVTTTGTTTACDTHDH
-----TSTTTCC-----
Original motif |
Reverse complement motif |
Consensus sequence: HDHADGTAAACAAAVVH |
Consensus sequence: DVVTTTGTTTACDTHDH |
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|
|
|
Motif ID: |
UP00424 |
Motif name: |
Gm4881 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
7 |
Similarity score: |
0.0113154 |
Alignment:
DHDACCGGAAMTHBVB
------GGAAASA---
Original motif |
Reverse complement motif |
Consensus sequence: VBBHAYTTCCGGTDDD |
Consensus sequence: DHDACCGGAAMTHBVB |
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|
|
Dataset #: 1 |
Motif ID: 47 |
Motif name: Motif 47 |
Original motif |
Reverse complement motif |
Consensus sequence: KGCTGCTG |
Consensus sequence: CAGCAGCR |
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Best Matches for Motif ID 47 (Highest to Lowest)
Motif ID: |
UP00027 |
Motif name: |
Osr1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
DHBHGCTACKGTHDHH
---KGCTGCTG-----
Original motif |
Reverse complement motif |
Consensus sequence: HHDHACRGTAGCHVHD |
Consensus sequence: DHBHGCTACKGTHDHH |
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|
|
|
Motif ID: |
UP00052 |
Motif name: |
Osr2_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.00109484 |
Alignment:
HHHHGCTACKGTHVHH
---KGCTGCTG-----
Original motif |
Reverse complement motif |
Consensus sequence: HHVHACRGTAGCHHHD |
Consensus sequence: HHHHGCTACKGTHVHH |
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|
|
Motif ID: |
UP00102 |
Motif name: |
Zic1_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.0101682 |
Alignment:
DVHCCTGCTGBGDDB
--KGCTGCTG-----
Original motif |
Reverse complement motif |
Consensus sequence: BHDCVCAGCAGGHVD |
Consensus sequence: DVHCCTGCTGBGDDB |
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|
|
|
Motif ID: |
UP00057 |
Motif name: |
Zic2_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.0142996 |
Alignment:
HHDCVCAGCAKGVVD
-----CAGCAGCR--
Original motif |
Reverse complement motif |
Consensus sequence: HHDCVCAGCAKGVVD |
Consensus sequence: DVBCYTGCTGBGDDD |
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|
|
|
Motif ID: |
UP00006 |
Motif name: |
Zic3_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.01699 |
Alignment:
DVHCYTGCTGTGHDH
--KGCTGCTG-----
Original motif |
Reverse complement motif |
Consensus sequence: DDDCACAGCAKGHVD |
Consensus sequence: DVHCYTGCTGTGHDH |
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|
|
Dataset #: 1 |
Motif ID: 48 |
Motif name: Motif 48 |
Original motif |
Reverse complement motif |
Consensus sequence: ACACWG |
Consensus sequence: CWGTGT |
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Best Matches for Motif ID 48 (Highest to Lowest)
Motif ID: |
UP00030 |
Motif name: |
Sox11_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
6 |
Similarity score: |
0 |
Alignment:
HBDDRAACAAAGRABHH
------ACACWG-----
Original motif |
Reverse complement motif |
Consensus sequence: HBDDRAACAAAGRABHH |
Consensus sequence: HHBTMCTTTGTTMDDVH |
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|
|
Motif ID: |
UP00031 |
Motif name: |
Zbtb3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
6 |
Similarity score: |
0.000107057 |
Alignment:
BBBAVTGCAGTGBBVDD
-------CWGTGT----
Original motif |
Reverse complement motif |
Consensus sequence: DDBBBCACTGCABTBBB |
Consensus sequence: BBBAVTGCAGTGBBVDD |
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|
|
Motif ID: |
UP00062 |
Motif name: |
Sox4_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
6 |
Similarity score: |
0.00451967 |
Alignment:
HBDDDAACAAAGRVBHH
------ACACWG-----
Original motif |
Reverse complement motif |
Consensus sequence: HBDDDAACAAAGRVBHH |
Consensus sequence: HHBBMCTTTGTTHDDBH |
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|
|
|
Motif ID: |
UP00042 |
Motif name: |
Gm397_second |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
6 |
Similarity score: |
0.00474978 |
Alignment:
HBGYGTGTGTGCVRVD
----CWGTGT------
Original motif |
Reverse complement motif |
Consensus sequence: DVMVGCACACACKCVH |
Consensus sequence: HBGYGTGTGTGCVRVD |
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|
|
Motif ID: |
UP00095 |
Motif name: |
Zfp691_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
6 |
Similarity score: |
0.0121829 |
Alignment:
DDHBYGAGCACTGBHHB
-------ACACWG----
Original motif |
Reverse complement motif |
Consensus sequence: BDHVCAGTGCTCMBHDD |
Consensus sequence: DDHBYGAGCACTGBHHB |
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Dataset #: 1 |
Motif ID: 49 |
Motif name: Motif 49 |
Original motif |
Reverse complement motif |
Consensus sequence: AGATAAAR |
Consensus sequence: KTTTATCT |
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Best Matches for Motif ID 49 (Highest to Lowest)
Motif ID: |
UP00032 |
Motif name: |
Gata3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
BDHDDADAGATAAGADHBDHVD
-------AGATAAAR-------
Original motif |
Reverse complement motif |
Consensus sequence: BDHDDADAGATAAGADHBDHVD |
Consensus sequence: HBHDVHDTCTTATCTHTDDHDV |
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|
|
|
Motif ID: |
UP00100 |
Motif name: |
Gata6_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.00785656 |
Alignment:
DHDVDWGATAAGADDHV
-----AGATAAAR----
Original motif |
Reverse complement motif |
Consensus sequence: DHDVDWGATAAGADDHV |
Consensus sequence: VHDDTCTTATCWHBDHD |
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|
|
Motif ID: |
UP00080 |
Motif name: |
Gata5_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.0123861 |
Alignment:
HDDDCTGATAAGRVDDD
-----AGATAAAR----
Original motif |
Reverse complement motif |
Consensus sequence: HDDDCTGATAAGRVDDD |
Consensus sequence: DDHBKCTTATCAGDDDH |
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|
|
Motif ID: |
UP00180 |
Motif name: |
Hoxd13 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.0188096 |
Alignment:
HDHHTTTTATTKKHDD
----KTTTATCT----
Original motif |
Reverse complement motif |
Consensus sequence: HDHYYAATAAAAHHHH |
Consensus sequence: HDHHTTTTATTKKHDD |
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|
|
Motif ID: |
UP00121 |
Motif name: |
Hoxd10 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.0206207 |
Alignment:
HDDDATTTTATTKVRDB
-----KTTTATCT----
Original motif |
Reverse complement motif |
Consensus sequence: VDKVYAATAAAATDDDH |
Consensus sequence: HDDDATTTTATTKVRDB |
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|
|
Dataset #: 1 |
Motif ID: 50 |
Motif name: Motif 50 |
Original motif |
Reverse complement motif |
Consensus sequence: GAAGAGCA |
Consensus sequence: TGCTCTTC |
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Best Matches for Motif ID 50 (Highest to Lowest)
Motif ID: |
UP00095 |
Motif name: |
Zfp691_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
BDHVCAGTGCTCMBHDD
-------TGCTCTTC--
Original motif |
Reverse complement motif |
Consensus sequence: BDHVCAGTGCTCMBHDD |
Consensus sequence: DDHBYGAGCACTGBHHB |
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|
|
|
Motif ID: |
UP00420 |
Motif name: |
Elk3 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
2 |
Number of overlap: |
8 |
Similarity score: |
0.00640383 |
Alignment:
DVBBACCGGAAGYDVVV
--------GAAGAGCA-
Original motif |
Reverse complement motif |
Consensus sequence: DVBBACCGGAAGYDVVV |
Consensus sequence: VBVDMCTTCCGGTVBVD |
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|
|
|
Motif ID: |
UP00013 |
Motif name: |
Gabpa_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
2 |
Number of overlap: |
8 |
Similarity score: |
0.0102626 |
Alignment:
HVHHACCGGAAGTDHHV
--------GAAGAGCA-
Original motif |
Reverse complement motif |
Consensus sequence: HVHHACCGGAAGTDHHV |
Consensus sequence: BHHHACTTCCGGTHHBD |
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|
|
|
Motif ID: |
UP00173 |
Motif name: |
Hoxc13 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
7 |
Number of overlap: |
8 |
Similarity score: |
0.0113649 |
Alignment:
DHWTTTTAMGAGBDHH
------GAAGAGCA--
Original motif |
Reverse complement motif |
Consensus sequence: HHDBCTCRTAAAAWHD |
Consensus sequence: DHWTTTTAMGAGBDHH |
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|
|
|
Motif ID: |
UP00404 |
Motif name: |
Elf2 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
8 |
Similarity score: |
0.0117359 |
Alignment:
DBBHACTTCCGGDWDB
-TGCTCTTC-------
Original motif |
Reverse complement motif |
Consensus sequence: DBBHACTTCCGGDWDB |
Consensus sequence: BDWDCCGGAAGTHBBD |
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|
|
Dataset #: 1 |
Motif ID: 51 |
Motif name: Motif 51 |
Original motif |
Reverse complement motif |
Consensus sequence: AGAGCWGG |
Consensus sequence: CCWGCTCT |
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Best Matches for Motif ID 51 (Highest to Lowest)
Motif ID: |
UP00102 |
Motif name: |
Zic1_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
BHDCVCAGCAGGHVD
----AGAGCWGG---
Original motif |
Reverse complement motif |
Consensus sequence: BHDCVCAGCAGGHVD |
Consensus sequence: DVHCCTGCTGBGDDB |
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|
|
|
Motif ID: |
UP00006 |
Motif name: |
Zic3_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.000488488 |
Alignment:
DVHCYTGCTGTGHDH
---CCWGCTCT----
Original motif |
Reverse complement motif |
Consensus sequence: DDDCACAGCAKGHVD |
Consensus sequence: DVHCYTGCTGTGHDH |
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|
|
|
Motif ID: |
UP00057 |
Motif name: |
Zic2_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
8 |
Similarity score: |
0.00566514 |
Alignment:
HHDCVCAGCAKGVVD
----AGAGCWGG---
Original motif |
Reverse complement motif |
Consensus sequence: HHDCVCAGCAKGVVD |
Consensus sequence: DVBCYTGCTGBGDDD |
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|
|
|
Motif ID: |
UP00007 |
Motif name: |
Egr1_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.0121797 |
Alignment:
BHHDTCCCACTCBDBV
-----CCWGCTCT---
Original motif |
Reverse complement motif |
Consensus sequence: BBHBGAGTGGGAHHDB |
Consensus sequence: BHHDTCCCACTCBDBV |
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|
|
|
Motif ID: |
UP00019 |
Motif name: |
Zbtb12_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0.0132554 |
Alignment:
BBGATCTAGAACBKHDB
-------AGAGCWGG--
Original motif |
Reverse complement motif |
Consensus sequence: BDHRBGTTCTAGATCVB |
Consensus sequence: BBGATCTAGAACBKHDB |
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|
|
Dataset #: 2 |
Motif ID: 52 |
Motif name: Motif 52 |
Original motif |
Reverse complement motif |
Consensus sequence: AGVCAGG |
Consensus sequence: CCTGVCT |
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Best Matches for Motif ID 52 (Highest to Lowest)
Motif ID: |
UP00046 |
Motif name: |
Tcfe2a_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
3 |
Number of overlap: |
7 |
Similarity score: |
0 |
Alignment:
VBHHVCAGGTGCDVDHD
--AGVCAGG--------
Original motif |
Reverse complement motif |
Consensus sequence: VBHHVCAGGTGCDVDHD |
Consensus sequence: DHDBHGCACCTGBDDVB |
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|
|
|
Motif ID: |
UP00203 |
Motif name: |
Pknox1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0.00125989 |
Alignment:
VVWTTGACAGSTSBKD
----AGVCAGG-----
Original motif |
Reverse complement motif |
Consensus sequence: DRVSASCTGTCAAWVV |
Consensus sequence: VVWTTGACAGSTSBKD |
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|
|
|
Motif ID: |
UP00205 |
Motif name: |
Pknox2 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
7 |
Similarity score: |
0.00252122 |
Alignment:
VHATTGACAGSKSVTH
----AGVCAGG-----
Original motif |
Reverse complement motif |
Consensus sequence: HAVSRSCTGTCAATHB |
Consensus sequence: VHATTGACAGSKSVTH |
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|
|
|
Motif ID: |
UP00226 |
Motif name: |
Mrg1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0.00269319 |
Alignment:
BHWTTGACAGSTBBTW
----AGVCAGG-----
Original motif |
Reverse complement motif |
Consensus sequence: WAVBASCTGTCAAWHB |
Consensus sequence: BHWTTGACAGSTBBTW |
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|
|
|
Motif ID: |
UP00186 |
Motif name: |
Meis1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0.00619435 |
Alignment:
DBWTTGACAGSTBVTW
----AGVCAGG-----
Original motif |
Reverse complement motif |
Consensus sequence: WAVBASCTGTCAAWVH |
Consensus sequence: DBWTTGACAGSTBVTW |
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|
|
|
Dataset #: 2 |
Motif ID: 53 |
Motif name: Motif 53 |
Original motif |
Reverse complement motif |
Consensus sequence: TSTGTR |
Consensus sequence: MACASA |
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|
Best Matches for Motif ID 53 (Highest to Lowest)
Motif ID: |
UP00026 |
Motif name: |
Zscan4_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
6 |
Similarity score: |
0 |
Alignment:
BHHHTTGTGTGCKHVD
-----TSTGTR-----
Original motif |
Reverse complement motif |
Consensus sequence: HVHRGCACACAAHHHV |
Consensus sequence: BHHHTTGTGTGCKHVD |
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|
|
|
Motif ID: |
UP00042 |
Motif name: |
Gm397_second |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
6 |
Similarity score: |
0.00423357 |
Alignment:
HBGYGTGTGTGCVRVD
-----TSTGTR-----
Original motif |
Reverse complement motif |
Consensus sequence: DVMVGCACACACKCVH |
Consensus sequence: HBGYGTGTGTGCVRVD |
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|
|
|
Motif ID: |
UP00026 |
Motif name: |
Zscan4_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
6 |
Similarity score: |
0.00980483 |
Alignment:
HDHTMTGTGCACADVHD
---TSTGTR--------
Original motif |
Reverse complement motif |
Consensus sequence: DHVDTGTGCACAYAHDH |
Consensus sequence: HDHTMTGTGCACADVHD |
|
|
|
|
Motif ID: |
UP00042 |
Motif name: |
Gm397_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
9 |
Number of overlap: |
6 |
Similarity score: |
0.0166332 |
Alignment:
HHRTATGTGCACATHHD
---TSTGTR--------
Original motif |
Reverse complement motif |
Consensus sequence: HHDATGTGCACATAMDH |
Consensus sequence: HHRTATGTGCACATHHD |
|
|
|
|
Motif ID: |
UP00041 |
Motif name: |
Foxj1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
7 |
Number of overlap: |
6 |
Similarity score: |
0.0213483 |
Alignment:
HDHRTAAACAAAHDDD
------MACASA----
Original motif |
Reverse complement motif |
Consensus sequence: HDHRTAAACAAAHDDD |
Consensus sequence: DDDHTTTGTTTAMHDH |
|
|
|
|
Dataset #: 2 |
Motif ID: 54 |
Motif name: Motif 54 |
Original motif |
Reverse complement motif |
Consensus sequence: RGAAA |
Consensus sequence: TTTCK |
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|
|
|
Best Matches for Motif ID 54 (Highest to Lowest)
Motif ID: |
UP00018 |
Motif name: |
Irf4_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
5 |
Similarity score: |
0 |
Alignment:
TBDKGTTTCGMTDHV
-----TTTCK-----
Original motif |
Reverse complement motif |
Consensus sequence: VDDAYCGAAACYDVA |
Consensus sequence: TBDKGTTTCGMTDHV |
|
|
|
|
Motif ID: |
UP00074 |
Motif name: |
Isgf3g_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
5 |
Similarity score: |
0.00225908 |
Alignment:
TDAGTTTCGWTTKDV
----TTTCK------
Original motif |
Reverse complement motif |
Consensus sequence: VDRAAWCGAAACTDA |
Consensus sequence: TDAGTTTCGWTTKDV |
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|
|
Motif ID: |
UP00040 |
Motif name: |
Irf5_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
5 |
Similarity score: |
0.00434877 |
Alignment:
BDKGTTTCGKTWDDD
----TTTCK------
Original motif |
Reverse complement motif |
Consensus sequence: DDDWAYCGAAACYDV |
Consensus sequence: BDKGTTTCGKTWDDD |
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|
|
|
Motif ID: |
UP00011 |
Motif name: |
Irf6_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
5 |
Similarity score: |
0.0136873 |
Alignment:
DHDBTKGTTTCGHTHDD
-------TTTCK-----
Original motif |
Reverse complement motif |
Consensus sequence: HDDAHCGAAACYAVDDD |
Consensus sequence: DHDBTKGTTTCGHTHDD |
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|
|
|
Motif ID: |
UP00043 |
Motif name: |
Bcl6b_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
10 |
Number of overlap: |
5 |
Similarity score: |
0.0141224 |
Alignment:
DCTTTCKAGGAATHHV
--TTTCK---------
Original motif |
Reverse complement motif |
Consensus sequence: DCTTTCKAGGAATHHV |
Consensus sequence: VHHATTCCTYGAAAGD |
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|
|
Dataset #: 2 |
Motif ID: 55 |
Motif name: Motif 55 |
Original motif |
Reverse complement motif |
Consensus sequence: TTTAAAA |
Consensus sequence: TTTTAAA |
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Best Matches for Motif ID 55 (Highest to Lowest)
Motif ID: |
UP00173 |
Motif name: |
Hoxc13 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0 |
Alignment:
DHWTTTTAMGAGBDHH
----TTTAAAA-----
Original motif |
Reverse complement motif |
Consensus sequence: HHDBCTCRTAAAAWHD |
Consensus sequence: DHWTTTTAMGAGBDHH |
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|
|
|
Motif ID: |
UP00061 |
Motif name: |
Foxl1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
7 |
Similarity score: |
0.00269372 |
Alignment:
VVVWTTGTTTAMATTWD
-------TTTAAAA---
Original motif |
Reverse complement motif |
Consensus sequence: DWAATRTAAACAAWVVB |
Consensus sequence: VVVWTTGTTTAMATTWD |
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|
|
Motif ID: |
UP00245 |
Motif name: |
Hoxc10 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
7 |
Similarity score: |
0.00395798 |
Alignment:
VBDDTTTACGACDDDH
----TTTAAAA-----
Original motif |
Reverse complement motif |
Consensus sequence: HDDDGTCGTAAADHBB |
Consensus sequence: VBDDTTTACGACDDDH |
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|
|
Motif ID: |
UP00246 |
Motif name: |
Hoxa11 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0.00543955 |
Alignment:
DDDTTTTACGACDTDH
----TTTAAAA-----
Original motif |
Reverse complement motif |
Consensus sequence: HDADGTCGTAAAAHDD |
Consensus sequence: DDDTTTTACGACDTDH |
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|
|
Motif ID: |
UP00183 |
Motif name: |
Hoxa13 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
7 |
Similarity score: |
0.00548253 |
Alignment:
DVWTTTTACGAGBHDH
----TTTAAAA-----
Original motif |
Reverse complement motif |
Consensus sequence: HDHBCTCGTAAAAWBD |
Consensus sequence: DVWTTTTACGAGBHDH |
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|
|
Dataset #: 2 |
Motif ID: 56 |
Motif name: Motif 56 |
Original motif |
Reverse complement motif |
Consensus sequence: CACGGA |
Consensus sequence: TCCGTG |
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Best Matches for Motif ID 56 (Highest to Lowest)
Motif ID: |
UP00097 |
Motif name: |
Mtf1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
9 |
Number of overlap: |
6 |
Similarity score: |
0 |
Alignment:
HDYTTGCACACGDHBH
--------CACGGA--
Original motif |
Reverse complement motif |
Consensus sequence: DBDHCGTGTGCAAMDH |
Consensus sequence: HDYTTGCACACGDHBH |
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|
|
Motif ID: |
UP00413 |
Motif name: |
Elf4 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
6 |
Similarity score: |
0.00585124 |
Alignment:
DBBHACTTCCGGKWTH
-------TCCGTG---
Original motif |
Reverse complement motif |
Consensus sequence: DBBHACTTCCGGKWTH |
Consensus sequence: HAWYCCGGAAGTHBBD |
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|
|
Motif ID: |
UP00015 |
Motif name: |
Ehf_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
6 |
Similarity score: |
0.00729902 |
Alignment:
VBDABCCGGAAGTDD
----CACGGA-----
Original motif |
Reverse complement motif |
Consensus sequence: VBDABCCGGAAGTDD |
Consensus sequence: DDACTTCCGGBTHBB |
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|
|
Motif ID: |
UP00418 |
Motif name: |
Etv6 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
6 |
Similarity score: |
0.00854253 |
Alignment:
BHAHCCGGAAGTABDVD
---CACGGA--------
Original motif |
Reverse complement motif |
Consensus sequence: DVHBTACTTCCGGHTHB |
Consensus sequence: BHAHCCGGAAGTABDVD |
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|
|
Motif ID: |
UP00415 |
Motif name: |
Elk4 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
8 |
Number of overlap: |
6 |
Similarity score: |
0.00956651 |
Alignment:
DHDACCGGAAKKHBVB
---CACGGA-------
Original motif |
Reverse complement motif |
Consensus sequence: VBBHRYTTCCGGTDDH |
Consensus sequence: DHDACCGGAAKKHBVB |
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|
Dataset #: 2 |
Motif ID: 57 |
Motif name: Motif 57 |
Original motif |
Reverse complement motif |
Consensus sequence: SAGGAA |
Consensus sequence: TTCCTS |
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Best Matches for Motif ID 57 (Highest to Lowest)
Motif ID: |
UP00409 |
Motif name: |
Elf5 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
6 |
Similarity score: |
0 |
Alignment:
BWAHSMGGAAGTWD
----SAGGAA----
Original motif |
Reverse complement motif |
Consensus sequence: BWAHSMGGAAGTWD |
Consensus sequence: DWACTTCCRSDTWV |
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|
|
Motif ID: |
UP00015 |
Motif name: |
Ehf_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
6 |
Similarity score: |
0.0107799 |
Alignment:
VBDABCCGGAAGTDD
-----SAGGAA----
Original motif |
Reverse complement motif |
Consensus sequence: VBDABCCGGAAGTDD |
Consensus sequence: DDACTTCCGGBTHBB |
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|
|
Motif ID: |
UP00085 |
Motif name: |
Sfpi1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
6 |
Similarity score: |
0.0111702 |
Alignment:
BDAWGVGGAAGTDH
----SAGGAA----
Original motif |
Reverse complement motif |
Consensus sequence: BDAWGVGGAAGTDH |
Consensus sequence: HDACTTCCBCWTDV |
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|
|
Motif ID: |
UP00090 |
Motif name: |
Elf3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
6 |
Similarity score: |
0.0129245 |
Alignment:
TDAMTTCCYYDTD
----TTCCTS---
Original motif |
Reverse complement motif |
Consensus sequence: DAHMMGGAARTDA |
Consensus sequence: TDAMTTCCYYDTD |
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|
|
Motif ID: |
UP00419 |
Motif name: |
Spic |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
6 |
Similarity score: |
0.0156312 |
Alignment:
VAAAGMGGAAGTWD
----SAGGAA----
Original motif |
Reverse complement motif |
Consensus sequence: VAAAGMGGAAGTWD |
Consensus sequence: DWACTTCCRCTTTB |
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|
Dataset #: 2 |
Motif ID: 58 |
Motif name: Motif 58 |
Original motif |
Reverse complement motif |
Consensus sequence: CACACACACACACA |
Consensus sequence: TGTGTGTGTGTGTG |
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Best Matches for Motif ID 58 (Highest to Lowest)
Motif ID: |
UP00538 |
Motif name: |
Gli1_v016060_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
10 |
Number of overlap: |
14 |
Similarity score: |
0.0412006 |
Alignment:
HVBDAGCGBGGGTGGCRDBDDDB
TGTGTGTGTGTGTG---------
Original motif |
Reverse complement motif |
Consensus sequence: HVBDAGCGBGGGTGGCRDBDDDB |
Consensus sequence: BDDHVDKGCCACCCVCGCTDBVH |
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|
|
Motif ID: |
UP00042 |
Motif name: |
Gm397_second |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
14 |
Similarity score: |
0.0416527 |
Alignment:
DVMVGCACACACKCVH
-CACACACACACACA-
Original motif |
Reverse complement motif |
Consensus sequence: DVMVGCACACACKCVH |
Consensus sequence: HBGYGTGTGTGCVRVD |
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|
|
Motif ID: |
UP00538 |
Motif name: |
Gli1_v015681_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
9 |
Number of overlap: |
14 |
Similarity score: |
0.0449549 |
Alignment:
MHHHWHYTMCCHCCCACVAABVH
--------CACACACACACACA-
Original motif |
Reverse complement motif |
Consensus sequence: MHHHWHYTMCCHCCCACVAABVH |
Consensus sequence: DVVTTVGTGGGHGGYAMHWHHHY |
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|
|
Motif ID: |
UP00025 |
Motif name: |
Foxk1_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
1 |
Number of overlap: |
14 |
Similarity score: |
0.0479822 |
Alignment:
HDDTGTTKTTKTHHD
-TGTGTGTGTGTGTG
Original motif |
Reverse complement motif |
Consensus sequence: HHHAYAAYAACAHHH |
Consensus sequence: HDDTGTTKTTKTHHD |
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|
|
Motif ID: |
UP00400 |
Motif name: |
Zif268 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
14 |
Similarity score: |
0.0489492 |
Alignment:
BADHBDHCGCCCMCGCAHHDBBV
-------CACACACACACACA--
Original motif |
Reverse complement motif |
Consensus sequence: BADHBDHCGCCCMCGCAHHDBBV |
Consensus sequence: VVVDHHTGCGYGGGCGDHVHHTB |
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|
|
Dataset #: 2 |
Motif ID: 59 |
Motif name: Motif 59 |
Original motif |
Reverse complement motif |
Consensus sequence: CTBCCTCHSYCYCC |
Consensus sequence: GGMGKSHGAGGBAG |
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Best Matches for Motif ID 59 (Highest to Lowest)
Motif ID: |
UP00013 |
Motif name: |
Gabpa_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
14 |
Similarity score: |
0.0333718 |
Alignment:
CYDBYWTCCSMHBVVH
-CTBCCTCHSYCYCC-
Original motif |
Reverse complement motif |
Consensus sequence: CYDBYWTCCSMHBVVH |
Consensus sequence: DBVVDRSGGAWKVHKG |
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|
|
Motif ID: |
UP00099 |
Motif name: |
Ascl2_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
14 |
Similarity score: |
0.0436108 |
Alignment:
HVDVGGGHGGGGDBHB
-GGMGKSHGAGGBAG-
Original motif |
Reverse complement motif |
Consensus sequence: BHVDCCCCDCCCBDBH |
Consensus sequence: HVDVGGGHGGGGDBHB |
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|
|
Motif ID: |
UP00002 |
Motif name: |
Sp4_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
14 |
Similarity score: |
0.0445099 |
Alignment:
BDHHMCGCCCCCTHVBB
-CTBCCTCHSYCYCC--
Original motif |
Reverse complement motif |
Consensus sequence: BDHHMCGCCCCCTHVBB |
Consensus sequence: BVVHAGGGGGCGRDHHB |
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|
|
|
Motif ID: |
UP00539 |
Motif name: |
Gli2_v016060_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
7 |
Number of overlap: |
14 |
Similarity score: |
0.0448549 |
Alignment:
RTHBSYCGCCMCMYVCGBTVDH
--CTBCCTCHSYCYCC------
Original motif |
Reverse complement motif |
Consensus sequence: RTHBSYCGCCMCMYVCGBTVDH |
Consensus sequence: HDBABCGBKRGYGGCGMSBHAK |
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|
|
|
Motif ID: |
UP00021 |
Motif name: |
Zfp281_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
14 |
Similarity score: |
0.045689 |
Alignment:
DBCCCCCCCCCCMYC
-CTBCCTCHSYCYCC
Original motif |
Reverse complement motif |
Consensus sequence: DBCCCCCCCCCCMYC |
Consensus sequence: GKRGGGGGGGGGGBD |
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|
|
Dataset #: 2 |
Motif ID: 60 |
Motif name: Motif 60 |
Original motif |
Reverse complement motif |
Consensus sequence: AADAAAAMAAAAAM |
Consensus sequence: YTTTTTRTTTTDTT |
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|
Best Matches for Motif ID 60 (Highest to Lowest)
Motif ID: |
UP00061 |
Motif name: |
Foxl1_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
1 |
Number of overlap: |
14 |
Similarity score: |
0.0143339 |
Alignment:
HDTYTTGTTWTKDDDT
YTTTTTRTTTTDTT--
Original motif |
Reverse complement motif |
Consensus sequence: ADDDYAWAACAAMAHH |
Consensus sequence: HDTYTTGTTWTKDDDT |
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|
|
|
Motif ID: |
UP00077 |
Motif name: |
Srf_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
14 |
Similarity score: |
0.0231061 |
Alignment:
VBDDAAAAAAAAMVBHH
-AADAAAAMAAAAAM--
Original motif |
Reverse complement motif |
Consensus sequence: VBDDAAAAAAAAMVBHH |
Consensus sequence: HHVBYTTTTTTTTDDVV |
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|
|
|
Motif ID: |
UP00039 |
Motif name: |
Foxj3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
14 |
Similarity score: |
0.0239537 |
Alignment:
HDHADGTAAACAAAVVH
---AADAAAAMAAAAAM
Original motif |
Reverse complement motif |
Consensus sequence: HDHADGTAAACAAAVVH |
Consensus sequence: DVVTTTGTTTACDTHDH |
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|
|
|
Motif ID: |
UP00062 |
Motif name: |
Sox4_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
1 |
Number of overlap: |
14 |
Similarity score: |
0.0256033 |
Alignment:
HBDDDAACAAAGRVBHH
AADAAAAMAAAAAM---
Original motif |
Reverse complement motif |
Consensus sequence: HBDDDAACAAAGRVBHH |
Consensus sequence: HHBBMCTTTGTTHDDBH |
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|
|
|
Motif ID: |
UP00061 |
Motif name: |
Foxl1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
1 |
Number of overlap: |
14 |
Similarity score: |
0.0256443 |
Alignment:
DWAATRTAAACAAWVVB
---AADAAAAMAAAAAM
Original motif |
Reverse complement motif |
Consensus sequence: DWAATRTAAACAAWVVB |
Consensus sequence: VVVWTTGTTTAMATTWD |
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|
|
|
Dataset #: 3 |
Motif ID: 61 |
Motif name: MEF2A |
Original motif |
Reverse complement motif |
Consensus sequence: CTATTTWTAG |
Consensus sequence: CTAWAAATAG |
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|
|
|
Best Matches for Motif ID 61 (Highest to Lowest)
Motif ID: |
UP00136 |
Motif name: |
Prrx2 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
10 |
Similarity score: |
0.0146962 |
Alignment:
DDDHKCTAATTAGCHBT
---CTAWAAATAG----
Original motif |
Reverse complement motif |
Consensus sequence: AVHGCTAATTAGYDDDD |
Consensus sequence: DDDHKCTAATTAGCHBT |
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|
|
|
Motif ID: |
UP00263 |
Motif name: |
Hoxb8 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
2 |
Number of overlap: |
10 |
Similarity score: |
0.0163693 |
Alignment:
HVBDGYAATTAATADW
-----CTATTTWTAG-
Original motif |
Reverse complement motif |
Consensus sequence: HVBDGYAATTAATADW |
Consensus sequence: WDTATTAATTKCHBVH |
|
|
|
|
Motif ID: |
UP00077 |
Motif name: |
Srf_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
10 |
Similarity score: |
0.0166836 |
Alignment:
HHCCWTATAWGGHA
--CTATTTWTAG--
Original motif |
Reverse complement motif |
Consensus sequence: HHCCWTATAWGGHA |
Consensus sequence: THCCWTATAWGGHH |
|
|
|
|
Motif ID: |
UP00207 |
Motif name: |
Hoxb9 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
3 |
Number of overlap: |
10 |
Similarity score: |
0.0172097 |
Alignment:
HDHHTTTTATRGCKMV
--CTATTTWTAG----
Original motif |
Reverse complement motif |
Consensus sequence: VRRGCMATAAAAHHHD |
Consensus sequence: HDHHTTTTATRGCKMV |
|
|
|
|
Motif ID: |
UP00131 |
Motif name: |
Gbx2 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
10 |
Similarity score: |
0.0183254 |
Alignment:
DVDVKCTAATTAGMVVD
---CTAWAAATAG----
Original motif |
Reverse complement motif |
Consensus sequence: DVVRCTAATTAGYVDBD |
Consensus sequence: DVDVKCTAATTAGMVVD |
|
|
|
|
Dataset #: 3 |
Motif ID: 62 |
Motif name: TBP |
Original motif |
Reverse complement motif |
Consensus sequence: STATAAAWRVVVVBV |
Consensus sequence: VBVVVVMWTTTATAS |
|
|
|
|
Best Matches for Motif ID 62 (Highest to Lowest)
Motif ID: |
UP00263 |
Motif name: |
Hoxb8 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
2 |
Number of overlap: |
15 |
Similarity score: |
0.0516869 |
Alignment:
HVBDGYAATTAATADW
VBVVVVMWTTTATAS-
Original motif |
Reverse complement motif |
Consensus sequence: HVBDGYAATTAATADW |
Consensus sequence: WDTATTAATTKCHBVH |
|
|
|
|
Motif ID: |
UP00064 |
Motif name: |
Sox18_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
1 |
Number of overlap: |
15 |
Similarity score: |
0.0558243 |
Alignment:
DBVBTRAATTYADDHV
VBVVVVMWTTTATAS-
Original motif |
Reverse complement motif |
Consensus sequence: DBVBTRAATTYADDHV |
Consensus sequence: VDHDTKAATTMABBBH |
|
|
|
|
Motif ID: |
UP00032 |
Motif name: |
Gata3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
1 |
Number of overlap: |
15 |
Similarity score: |
0.056942 |
Alignment:
BDHDDADAGATAAGADHBDHVD
-------STATAAAWRVVVVBV
Original motif |
Reverse complement motif |
Consensus sequence: BDHDDADAGATAAGADHBDHVD |
Consensus sequence: HBHDVHDTCTTATCTHTDDHDV |
|
|
|
|
Motif ID: |
UP00098 |
Motif name: |
Rfx3_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
15 |
Similarity score: |
0.0584978 |
Alignment:
VCTBHBVCTTGGWTACVVVVVDB
-VBVVVVMWTTTATAS-------
Original motif |
Reverse complement motif |
Consensus sequence: VCTBHBVCTTGGWTACVVVVVDB |
Consensus sequence: BDBBVBVGTAWCCAAGVBHBAGB |
|
|
|
|
Motif ID: |
UP00126 |
Motif name: |
Dlx2 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
15 |
Similarity score: |
0.0596962 |
Alignment:
VVDRTAATTABHHHAB
-STATAAAWRVVVVBV
Original motif |
Reverse complement motif |
Consensus sequence: VVDRTAATTABHHHAB |
Consensus sequence: BTDHHBTAATTAKDVV |
|
|
|
|
Dataset #: 3 |
Motif ID: 63 |
Motif name: FOXL1 |
Original motif |
Reverse complement motif |
Consensus sequence: WHDAHATA |
Consensus sequence: TATDTDHW |
|
|
|
|
Best Matches for Motif ID 63 (Highest to Lowest)
Motif ID: |
UP00070 |
Motif name: |
Gcm1_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
1 |
Number of overlap: |
8 |
Similarity score: |
0.0187381 |
Alignment:
DDBVHATAGGGGRBRMB
WHDAHATA---------
Original motif |
Reverse complement motif |
Consensus sequence: DDBVHATAGGGGRBRMB |
Consensus sequence: BYMBKCCCCTATDVBHD |
|
|
|
|
Motif ID: |
UP00180 |
Motif name: |
Hoxd13 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
8 |
Similarity score: |
0.0275803 |
Alignment:
HDHHTTTTATTKKHDD
-------TATDTDHW-
Original motif |
Reverse complement motif |
Consensus sequence: HDHYYAATAAAAHHHH |
Consensus sequence: HDHHTTTTATTKKHDD |
|
|
|
|
Motif ID: |
UP00059 |
Motif name: |
Arid5a_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.0289039 |
Alignment:
VYAATATTGVDADH
----TATDTDHW--
Original motif |
Reverse complement motif |
Consensus sequence: VYAATATTGVDADH |
Consensus sequence: HDTDVCAATATTMV |
|
|
|
|
Motif ID: |
UP00059 |
Motif name: |
Arid5a_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
8 |
Similarity score: |
0.0298407 |
Alignment:
BDYDVAATACGADDBVV
-WHDAHATA--------
Original motif |
Reverse complement motif |
Consensus sequence: BDYDVAATACGADDBVV |
Consensus sequence: BBVDDTCGTATTVDMHB |
|
|
|
|
Motif ID: |
UP00154 |
Motif name: |
Dlx3 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
1 |
Number of overlap: |
8 |
Similarity score: |
0.0298907 |
Alignment:
BHVVDATAATTACMVHH
WHDAHATA---------
Original motif |
Reverse complement motif |
Consensus sequence: BHVVDATAATTACMVHH |
Consensus sequence: DHVRGTAATTATHVVDV |
|
|
|
|
Dataset #: 3 |
Motif ID: 64 |
Motif name: ARID3A |
Original motif |
Reverse complement motif |
Consensus sequence: ATYAAA |
Consensus sequence: TTTMAT |
|
|
|
|
Best Matches for Motif ID 64 (Highest to Lowest)
Motif ID: |
UP00212 |
Motif name: |
Lhx5 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
6 |
Similarity score: |
0 |
Alignment:
VDHATTAATTAAAWHHB
-------ATYAAA----
Original motif |
Reverse complement motif |
Consensus sequence: VDHATTAATTAAAWHHB |
Consensus sequence: VDHWTTTAATTAATHHV |
|
|
|
|
Motif ID: |
UP00130 |
Motif name: |
Lhx3 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
6 |
Similarity score: |
0.00146194 |
Alignment:
VDAATTAATTAAWWHHB
-------ATYAAA----
Original motif |
Reverse complement motif |
Consensus sequence: VDAATTAATTAAWWHHB |
Consensus sequence: VHHWWTTAATTAATTDV |
|
|
|
|
Motif ID: |
UP00169 |
Motif name: |
Lmx1b |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
6 |
Similarity score: |
0.00211796 |
Alignment:
BHDATTAATTAAWWWHB
-------ATYAAA----
Original motif |
Reverse complement motif |
Consensus sequence: VDWWWTTAATTAATDHB |
Consensus sequence: BHDATTAATTAAWWWHB |
|
|
|
|
Motif ID: |
UP00213 |
Motif name: |
Hoxa9 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
7 |
Number of overlap: |
6 |
Similarity score: |
0.00270371 |
Alignment:
WDTAWTTTWATGKCCGD
-----TTTMAT------
Original motif |
Reverse complement motif |
Consensus sequence: DCGGYCATWAAAWTADW |
Consensus sequence: WDTAWTTTWATGKCCGD |
|
|
|
|
Motif ID: |
UP00188 |
Motif name: |
Lmx1a |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
8 |
Number of overlap: |
6 |
Similarity score: |
0.00429494 |
Alignment:
BDWWWTTAATTAAHHVG
----TTTMAT-------
Original motif |
Reverse complement motif |
Consensus sequence: CVHHTTAATTAAWWWHB |
Consensus sequence: BDWWWTTAATTAAHHVG |
|
|
|
|
Dataset #: 3 |
Motif ID: 65 |
Motif name: Foxd3 |
Original motif |
Reverse complement motif |
Consensus sequence: GAWTGTTTDTTT |
Consensus sequence: AAAHAAACAWTC |
|
|
|
|
Best Matches for Motif ID 65 (Highest to Lowest)
Motif ID: |
UP00037 |
Motif name: |
Zfp105_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
12 |
Similarity score: |
0.0199939 |
Alignment:
HHHTTRTTDTTTKDH
-GAWTGTTTDTTT--
Original motif |
Reverse complement motif |
Consensus sequence: HDYAAAHAAMAADHD |
Consensus sequence: HHHTTRTTDTTTKDH |
|
|
|
|
Motif ID: |
UP00025 |
Motif name: |
Foxk1_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
12 |
Similarity score: |
0.0284901 |
Alignment:
HDDTGTTKTTKTHHD
GAWTGTTTDTTT---
Original motif |
Reverse complement motif |
Consensus sequence: HHHAYAAYAACAHHH |
Consensus sequence: HDDTGTTKTTKTHHD |
|
|
|
|
Motif ID: |
UP00090 |
Motif name: |
Elf3_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
1 |
Number of overlap: |
12 |
Similarity score: |
0.0300632 |
Alignment:
DBTHHAAAAAAAAVHDH
-----AAAHAAACAWTC
Original motif |
Reverse complement motif |
Consensus sequence: DBTHHAAAAAAAAVHDH |
Consensus sequence: DDHBTTTTTTTTHDAVH |
|
|
|
|
Motif ID: |
UP00077 |
Motif name: |
Srf_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
12 |
Similarity score: |
0.030621 |
Alignment:
VBDDAAAAAAAAMVBHH
-----AAAHAAACAWTC
Original motif |
Reverse complement motif |
Consensus sequence: VBDDAAAAAAAAMVBHH |
Consensus sequence: HHVBYTTTTTTTTDDVV |
|
|
|
|
Motif ID: |
UP00073 |
Motif name: |
Foxa2_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
12 |
Similarity score: |
0.0336182 |
Alignment:
VVDAATAACAAAVVB
-AAAHAAACAWTC--
Original motif |
Reverse complement motif |
Consensus sequence: VVDAATAACAAAVVB |
Consensus sequence: BVVTTTGTTATTDBB |
|
|
|
|
Dataset #: 3 |
Motif ID: 66 |
Motif name: Lhx3 |
Original motif |
Reverse complement motif |
Consensus sequence: WAATTAATTAWYB |
Consensus sequence: BMWTAATTAATTW |
|
|
|
|
Best Matches for Motif ID 66 (Highest to Lowest)
Motif ID: |
UP00158 |
Motif name: |
Pou1f1 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
13 |
Similarity score: |
0 |
Alignment:
BDHDTAATTAATTADBH
-BMWTAATTAATTW---
Original motif |
Reverse complement motif |
Consensus sequence: DVDTAATTAATTADDDB |
Consensus sequence: BDHDTAATTAATTADBH |
|
|
|
|
Motif ID: |
UP00105 |
Motif name: |
Pou3f4 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
2 |
Number of overlap: |
13 |
Similarity score: |
0.00121383 |
Alignment:
DVHTAATTAATTADDDB
---WAATTAATTAWYB-
Original motif |
Reverse complement motif |
Consensus sequence: DVHTAATTAATTADDDB |
Consensus sequence: BDDDTAATTAATTAHBD |
|
|
|
|
Motif ID: |
UP00129 |
Motif name: |
Pou3f1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
2 |
Number of overlap: |
13 |
Similarity score: |
0.00257587 |
Alignment:
DVBTAATTAATTAABTH
---WAATTAATTAWYB-
Original motif |
Reverse complement motif |
Consensus sequence: DVBTAATTAATTAABTH |
Consensus sequence: DAVTTAATTAATTAVBD |
|
|
|
|
Motif ID: |
UP00200 |
Motif name: |
Nkx6-1_2825.1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
13 |
Similarity score: |
0.00504022 |
Alignment:
DVHAATTAATTAMYBBG
--WAATTAATTAWYB--
Original motif |
Reverse complement motif |
Consensus sequence: DVHAATTAATTAMYBBG |
Consensus sequence: CBVMRTAATTAATTHBH |
|
|
|
|
Motif ID: |
UP00128 |
Motif name: |
Pou3f2 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
3 |
Number of overlap: |
13 |
Similarity score: |
0.0101975 |
Alignment:
VDDAATTAATTARBDHD
--WAATTAATTAWYB--
Original motif |
Reverse complement motif |
Consensus sequence: VDDAATTAATTARBDHD |
Consensus sequence: HHDVMTAATTAATTDDV |
|
|
|
|
Dataset #: 3 |
Motif ID: 67 |
Motif name: FOXI1 |
Original motif |
Reverse complement motif |
Consensus sequence: KBDTRTTTRTTT |
Consensus sequence: AAAMAAAMADBY |
|
|
|
|
Best Matches for Motif ID 67 (Highest to Lowest)
Motif ID: |
UP00077 |
Motif name: |
Srf_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
12 |
Similarity score: |
0.0179427 |
Alignment:
VBDDAAAAAAAAMVBHH
----AAAMAAAMADBY-
Original motif |
Reverse complement motif |
Consensus sequence: VBDDAAAAAAAAMVBHH |
Consensus sequence: HHVBYTTTTTTTTDDVV |
|
|
|
|
Motif ID: |
UP00090 |
Motif name: |
Elf3_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
1 |
Number of overlap: |
12 |
Similarity score: |
0.0239728 |
Alignment:
DDHBTTTTTTTTHDAVH
-----AAAMAAAMADBY
Original motif |
Reverse complement motif |
Consensus sequence: DBTHHAAAAAAAAVHDH |
Consensus sequence: DDHBTTTTTTTTHDAVH |
|
|
|
|
Motif ID: |
UP00025 |
Motif name: |
Foxk1_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
1 |
Number of overlap: |
12 |
Similarity score: |
0.0256298 |
Alignment:
HDDTGTTKTTKTHHD
KBDTRTTTRTTT---
Original motif |
Reverse complement motif |
Consensus sequence: HHHAYAAYAACAHHH |
Consensus sequence: HDDTGTTKTTKTHHD |
|
|
|
|
Motif ID: |
UP00073 |
Motif name: |
Foxa2_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
3 |
Number of overlap: |
12 |
Similarity score: |
0.0259593 |
Alignment:
BDVTTTKTTTACWTWHH
--KBDTRTTTRTTT---
Original motif |
Reverse complement motif |
Consensus sequence: HHWAWGTAAAYAAAVDB |
Consensus sequence: BDVTTTKTTTACWTWHH |
|
|
|
|
Motif ID: |
UP00037 |
Motif name: |
Zfp105_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
12 |
Similarity score: |
0.0264881 |
Alignment:
HHHTTRTTDTTTKDH
-KBDTRTTTRTTT--
Original motif |
Reverse complement motif |
Consensus sequence: HDYAAAHAAMAADHD |
Consensus sequence: HHHTTRTTDTTTKDH |
|
|
|
|
Dataset #: 3 |
Motif ID: 68 |
Motif name: HNF1A |
Original motif |
Reverse complement motif |
Consensus sequence: GGTTAATDATTAMC |
Consensus sequence: GYTAATDATTAACC |
|
|
|
|
Best Matches for Motif ID 68 (Highest to Lowest)
Motif ID: |
UP00196 |
Motif name: |
Hoxa4 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
2 |
Number of overlap: |
14 |
Similarity score: |
0.0302874 |
Alignment:
CVRGTTAATTAATHADH
--GGTTAATDATTAMC-
Original motif |
Reverse complement motif |
Consensus sequence: DDTHATTAATTAACKBG |
Consensus sequence: CVRGTTAATTAATHADH |
|
|
|
|
Motif ID: |
UP00144 |
Motif name: |
Hoxb4 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
2 |
Number of overlap: |
14 |
Similarity score: |
0.0326031 |
Alignment:
CVHRTTAATTAATHAHH
--GGTTAATDATTAMC-
Original motif |
Reverse complement motif |
Consensus sequence: CVHRTTAATTAATHAHH |
Consensus sequence: DDTHATTAATTAAMDVG |
|
|
|
|
Motif ID: |
UP00237 |
Motif name: |
Otp |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
14 |
Similarity score: |
0.0337345 |
Alignment:
VVHDRTTAATTAAYDDG
-GYTAATDATTAACC--
Original motif |
Reverse complement motif |
Consensus sequence: VVHDRTTAATTAAYDDG |
Consensus sequence: CHDMTTAATTAAKDHVV |
|
|
|
|
Motif ID: |
UP00164 |
Motif name: |
Hoxa7_2668.2 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
14 |
Similarity score: |
0.0338854 |
Alignment:
GBDDAHTAATTADHHVV
-GYTAATDATTAACC--
Original motif |
Reverse complement motif |
Consensus sequence: VVHDDTAATTAHTDDBC |
Consensus sequence: GBDDAHTAATTADHHVV |
|
|
|
|
Motif ID: |
UP00141 |
Motif name: |
Vsx1 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
14 |
Similarity score: |
0.0357442 |
Alignment:
VHTDHTTAATTAAMHVG
-GYTAATDATTAACC--
Original motif |
Reverse complement motif |
Consensus sequence: CVHRTTAATTAAHDAHB |
Consensus sequence: VHTDHTTAATTAAMHVG |
|
|
|
|
Dataset #: 3 |
Motif ID: 69 |
Motif name: NKX3-1 |
Original motif |
Reverse complement motif |
Consensus sequence: ATACTTA |
Consensus sequence: TAAGTAT |
|
|
|
|
Best Matches for Motif ID 69 (Highest to Lowest)
Motif ID: |
UP00154 |
Motif name: |
Dlx3 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0 |
Alignment:
DHVRGTAATTATHVVDV
-----TAAGTAT-----
Original motif |
Reverse complement motif |
Consensus sequence: BHVVDATAATTACMVHH |
Consensus sequence: DHVRGTAATTATHVVDV |
|
|
|
|
Motif ID: |
UP00110 |
Motif name: |
Dlx4 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0.000606776 |
Alignment:
GHVRGTAATTATDVVGV
-----TAAGTAT-----
Original motif |
Reverse complement motif |
Consensus sequence: BCVVDATAATTACMVHC |
Consensus sequence: GHVRGTAATTATDVVGV |
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Motif ID: |
UP00108 |
Motif name: |
Alx3 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
7 |
Number of overlap: |
7 |
Similarity score: |
0.00319583 |
Alignment:
VHVAKMTAATTAKTHBW
------TAAGTAT----
Original motif |
Reverse complement motif |
Consensus sequence: WVHAYTAATTARYTVHV |
Consensus sequence: VHVAKMTAATTAKTHBW |
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Motif ID: |
UP00202 |
Motif name: |
Dlx1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
7 |
Similarity score: |
0.00693044 |
Alignment:
BHGVRDTAATTADY
-----ATACTTA--
Original motif |
Reverse complement motif |
Consensus sequence: BHGVRDTAATTADY |
Consensus sequence: MDTAATTAHMBCHB |
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Motif ID: |
UP00214 |
Motif name: |
Hoxb5 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
7 |
Similarity score: |
0.00733424 |
Alignment:
HTDHGVTAATTABCVT
------TAAGTAT---
Original motif |
Reverse complement motif |
Consensus sequence: AVGBTAATTAVCHHAH |
Consensus sequence: HTDHGVTAATTABCVT |
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Dataset #: 3 |
Motif ID: 70 |
Motif name: Foxq1 |
Original motif |
Reverse complement motif |
Consensus sequence: HATTGTTTATW |
Consensus sequence: WATAAACAATH |
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Best Matches for Motif ID 70 (Highest to Lowest)
Motif ID: |
UP00041 |
Motif name: |
Foxj1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
11 |
Similarity score: |
0 |
Alignment:
HDHRTAAACAAAHDDD
--WATAAACAATH---
Original motif |
Reverse complement motif |
Consensus sequence: HDHRTAAACAAAHDDD |
Consensus sequence: DDDHTTTGTTTAMHDH |
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Motif ID: |
UP00039 |
Motif name: |
Foxj3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
11 |
Similarity score: |
0.0026812 |
Alignment:
HDHADGTAAACAAAVVH
----WATAAACAATH--
Original motif |
Reverse complement motif |
Consensus sequence: HDHADGTAAACAAAVVH |
Consensus sequence: DVVTTTGTTTACDTHDH |
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Motif ID: |
UP00061 |
Motif name: |
Foxl1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
11 |
Similarity score: |
0.00280369 |
Alignment:
DWAATRTAAACAAWVVB
----WATAAACAATH--
Original motif |
Reverse complement motif |
Consensus sequence: DWAATRTAAACAAWVVB |
Consensus sequence: VVVWTTGTTTAMATTWD |
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Motif ID: |
UP00025 |
Motif name: |
Foxk1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
11 |
Similarity score: |
0.00419331 |
Alignment:
DDAATGTAAACAAAVVB
----WATAAACAATH--
Original motif |
Reverse complement motif |
Consensus sequence: DDAATGTAAACAAAVVB |
Consensus sequence: BBVTTTGTTTACATTDD |
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Motif ID: |
UP00073 |
Motif name: |
Foxa2_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
11 |
Similarity score: |
0.00439236 |
Alignment:
HHWAWGTAAAYAAAVDB
----WATAAACAATH--
Original motif |
Reverse complement motif |
Consensus sequence: HHWAWGTAAAYAAAVDB |
Consensus sequence: BDVTTTKTTTACWTWHH |
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Dataset #: 3 |
Motif ID: 71 |
Motif name: Evi1 |
Original motif |
Reverse complement motif |
Consensus sequence: AAGAYAAGATAABA |
Consensus sequence: TBTTATCTTMTCTT |
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Best Matches for Motif ID 71 (Highest to Lowest)
Motif ID: |
UP00032 |
Motif name: |
Gata3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
7 |
Number of overlap: |
14 |
Similarity score: |
0 |
Alignment:
BDHDDADAGATAAGADHBDHVD
------AAGAYAAGATAABA--
Original motif |
Reverse complement motif |
Consensus sequence: BDHDDADAGATAAGADHBDHVD |
Consensus sequence: HBHDVHDTCTTATCTHTDDHDV |
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Motif ID: |
UP00170 |
Motif name: |
Isl2 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
14 |
Similarity score: |
0.0312075 |
Alignment:
HWDTTAATYKMTTHHR
-TBTTATCTTMTCTT-
Original motif |
Reverse complement motif |
Consensus sequence: MHHAAYYMATTAADWH |
Consensus sequence: HWDTTAATYKMTTHHR |
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Motif ID: |
UP00145 |
Motif name: |
Barhl2 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
14 |
Similarity score: |
0.0314743 |
Alignment:
HAMAAHCAATTAABHH
-AAGAYAAGATAABA-
Original motif |
Reverse complement motif |
Consensus sequence: HAMAAHCAATTAABHH |
Consensus sequence: HHBTTAATTGDTTYTH |
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Motif ID: |
UP00121 |
Motif name: |
Hoxd10 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
1 |
Number of overlap: |
14 |
Similarity score: |
0.0322547 |
Alignment:
HDDDATTTTATTKVRDB
TBTTATCTTMTCTT---
Original motif |
Reverse complement motif |
Consensus sequence: VDKVYAATAAAATDDDH |
Consensus sequence: HDDDATTTTATTKVRDB |
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Motif ID: |
UP00032 |
Motif name: |
Gata3_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
14 |
Similarity score: |
0.0325491 |
Alignment:
HHHBBMGATAVHATCWVVDHVH
----AAGAYAAGATAABA----
Original motif |
Reverse complement motif |
Consensus sequence: HBHDVBWGATHBTATCRVBHHH |
Consensus sequence: HHHBBMGATAVHATCWVVDHVH |
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Dataset #: 3 |
Motif ID: 72 |
Motif name: Nkx2-5 |
Original motif |
Reverse complement motif |
Consensus sequence: WTAAKTG |
Consensus sequence: CARTTAW |
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Best Matches for Motif ID 72 (Highest to Lowest)
Motif ID: |
UP00166 |
Motif name: |
Barhl1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
7 |
Similarity score: |
0 |
Alignment:
DDVKTAATTGGTTDTH
---WTAAKTG------
Original motif |
Reverse complement motif |
Consensus sequence: HAHAACCAATTARBDH |
Consensus sequence: DDVKTAATTGGTTDTH |
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Motif ID: |
UP00237 |
Motif name: |
Otp |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
3 |
Number of overlap: |
7 |
Similarity score: |
0.00115905 |
Alignment:
VVHDRTTAATTAAYDDG
--CARTTAW--------
Original motif |
Reverse complement motif |
Consensus sequence: VVHDRTTAATTAAYDDG |
Consensus sequence: CHDMTTAATTAAKDHVV |
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Motif ID: |
UP00263 |
Motif name: |
Hoxb8 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
7 |
Similarity score: |
0.00141056 |
Alignment:
WDTATTAATTKCHBVH
----WTAAKTG-----
Original motif |
Reverse complement motif |
Consensus sequence: HVBDGYAATTAATADW |
Consensus sequence: WDTATTAATTKCHBVH |
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Motif ID: |
UP00170 |
Motif name: |
Isl2 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
7 |
Similarity score: |
0.00307472 |
Alignment:
MHHAAYYMATTAADWH
------CARTTAW---
Original motif |
Reverse complement motif |
Consensus sequence: MHHAAYYMATTAADWH |
Consensus sequence: HWDTTAATYKMTTHHR |
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Motif ID: |
UP00244 |
Motif name: |
Tlx2 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
7 |
Number of overlap: |
7 |
Similarity score: |
0.00343945 |
Alignment:
BAATHAATTAATAAHWW
----CARTTAW------
Original motif |
Reverse complement motif |
Consensus sequence: BAATHAATTAATAAHWW |
Consensus sequence: WWDTTATTAATTHATTV |
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Dataset #: 3 |
Motif ID: 73 |
Motif name: SRY |
Original motif |
Reverse complement motif |
Consensus sequence: BDWAACAAT |
Consensus sequence: ATTGTTWDB |
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Best Matches for Motif ID 73 (Highest to Lowest)
Motif ID: |
UP00075 |
Motif name: |
Sox15_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
7 |
Number of overlap: |
9 |
Similarity score: |
0 |
Alignment:
HDDDDAACAATWRRBHD
--BDWAACAAT------
Original motif |
Reverse complement motif |
Consensus sequence: HDDDDAACAATWRRBHD |
Consensus sequence: DHVKMWATTGTTHDHDH |
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Motif ID: |
UP00014 |
Motif name: |
Sox17_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
1 |
Number of overlap: |
9 |
Similarity score: |
0.00043275 |
Alignment:
DDWTBAATTGTTDDB
------ATTGTTWDB
Original motif |
Reverse complement motif |
Consensus sequence: VDDAACAATTVAWHD |
Consensus sequence: DDWTBAATTGTTDDB |
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Motif ID: |
UP00034 |
Motif name: |
Sox7_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
10 |
Number of overlap: |
9 |
Similarity score: |
0.00666345 |
Alignment:
HHBDHDDAACAATDRHHHHHBW
----BDWAACAAT---------
Original motif |
Reverse complement motif |
Consensus sequence: HHBDHDDAACAATDRHHHHHBW |
Consensus sequence: WBHHHHHMDATTGTTHDHDVHH |
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Motif ID: |
UP00051 |
Motif name: |
Sox8_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
3 |
Number of overlap: |
9 |
Similarity score: |
0.00942662 |
Alignment:
DDDHDAACAATWBATDD
--BDWAACAAT------
Original motif |
Reverse complement motif |
Consensus sequence: DDATBWATTGTTHHDDD |
Consensus sequence: DDDHDAACAATWBATDD |
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Motif ID: |
UP00023 |
Motif name: |
Sox30_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
7 |
Number of overlap: |
9 |
Similarity score: |
0.0107093 |
Alignment:
HHHHMHATTGTTBDHD
------ATTGTTWDB-
Original motif |
Reverse complement motif |
Consensus sequence: DHDBAACAATDRHHHH |
Consensus sequence: HHHHMHATTGTTBDHD |
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Dataset #: 3 |
Motif ID: 74 |
Motif name: FOXC1 |
Original motif |
Reverse complement motif |
Consensus sequence: VBHVHGTA |
Consensus sequence: TACHBHBV |
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Best Matches for Motif ID 74 (Highest to Lowest)
Motif ID: |
UP00209 |
Motif name: |
Cart1_1275.1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
10 |
Number of overlap: |
8 |
Similarity score: |
0.0185694 |
Alignment:
VHHVVTTAATTAADRVB
VBHVHGTA---------
Original motif |
Reverse complement motif |
Consensus sequence: BVMDTTAATTAABBDDV |
Consensus sequence: VHHVVTTAATTAADRVB |
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Motif ID: |
UP00039 |
Motif name: |
Foxj3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
1 |
Number of overlap: |
8 |
Similarity score: |
0.0207969 |
Alignment:
DVVTTTGTTTACDTHDH
---------TACHBHBV
Original motif |
Reverse complement motif |
Consensus sequence: HDHADGTAAACAAAVVH |
Consensus sequence: DVVTTTGTTTACDTHDH |
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Motif ID: |
UP00187 |
Motif name: |
Alx4 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
10 |
Number of overlap: |
8 |
Similarity score: |
0.0208745 |
Alignment:
BVHHVKTAATTAMDDCG
VBHVHGTA---------
Original motif |
Reverse complement motif |
Consensus sequence: CGHDYTAATTARBHHVB |
Consensus sequence: BVHHVKTAATTAMDDCG |
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Motif ID: |
UP00257 |
Motif name: |
Shox2 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
1 |
Number of overlap: |
8 |
Similarity score: |
0.0213263 |
Alignment:
BDVVDKTAATTAMVDHV
VBHVHGTA---------
Original motif |
Reverse complement motif |
Consensus sequence: VDHVYTAATTARDBVDB |
Consensus sequence: BDVVDKTAATTAMVDHV |
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Motif ID: |
UP00088 |
Motif name: |
Plagl1_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
1 |
Number of overlap: |
8 |
Similarity score: |
0.0227422 |
Alignment:
DHDDGGTACCCCCCHBH
---------TACHBHBV
Original motif |
Reverse complement motif |
Consensus sequence: DBHGGGGGGTACCHHHD |
Consensus sequence: DHDDGGTACCCCCCHBH |
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Dataset #: 3 |
Motif ID: 75 |
Motif name: FOXF2 |
Original motif |
Reverse complement motif |
Consensus sequence: BHADSGTAAACAAD |
Consensus sequence: DTTGTTTACSBTBB |
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Best Matches for Motif ID 75 (Highest to Lowest)
Motif ID: |
UP00039 |
Motif name: |
Foxj3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
14 |
Similarity score: |
0 |
Alignment:
DVVTTTGTTTACDTHDH
---DTTGTTTACSBTBB
Original motif |
Reverse complement motif |
Consensus sequence: HDHADGTAAACAAAVVH |
Consensus sequence: DVVTTTGTTTACDTHDH |
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Motif ID: |
UP00025 |
Motif name: |
Foxk1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
1 |
Number of overlap: |
14 |
Similarity score: |
0.00393584 |
Alignment:
BBVTTTGTTTACATTDD
---DTTGTTTACSBTBB
Original motif |
Reverse complement motif |
Consensus sequence: DDAATGTAAACAAAVVB |
Consensus sequence: BBVTTTGTTTACATTDD |
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Motif ID: |
UP00061 |
Motif name: |
Foxl1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
1 |
Number of overlap: |
14 |
Similarity score: |
0.0108917 |
Alignment:
DWAATRTAAACAAWVVB
BHADSGTAAACAAD---
Original motif |
Reverse complement motif |
Consensus sequence: DWAATRTAAACAAWVVB |
Consensus sequence: VVVWTTGTTTAMATTWD |
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Motif ID: |
UP00073 |
Motif name: |
Foxa2_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
1 |
Number of overlap: |
14 |
Similarity score: |
0.0118559 |
Alignment:
BDVTTTKTTTACWTWHH
---DTTGTTTACSBTBB
Original motif |
Reverse complement motif |
Consensus sequence: HHWAWGTAAAYAAAVDB |
Consensus sequence: BDVTTTKTTTACWTWHH |
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Motif ID: |
UP00012 |
Motif name: |
Bbx_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
1 |
Number of overlap: |
14 |
Similarity score: |
0.0389436 |
Alignment:
HVWHBGTTAACABHBDV
BHADSGTAAACAAD---
Original motif |
Reverse complement motif |
Consensus sequence: HVWHBGTTAACABHBDV |
Consensus sequence: VHVHBTGTTAACVHWVH |
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Dataset #: 3 |
Motif ID: 76 |
Motif name: Sox2 |
Original motif |
Reverse complement motif |
Consensus sequence: CCWTTGTYATGCAAA |
Consensus sequence: TTTGCATMACAAWGG |
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Best Matches for Motif ID 76 (Highest to Lowest)
Motif ID: |
UP00039 |
Motif name: |
Foxj3_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
15 |
Similarity score: |
0.0330532 |
Alignment:
HDBAHCAWAACADWDVD
-TTTGCATMACAAWGG-
Original motif |
Reverse complement motif |
Consensus sequence: HDBAHCAWAACADWDVD |
Consensus sequence: DVHWDTGTTWTGDTBDH |
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Motif ID: |
UP00034 |
Motif name: |
Sox7_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
1 |
Number of overlap: |
15 |
Similarity score: |
0.0360255 |
Alignment:
HHBDHDDAACAATDRHHHHHBW
TTTGCATMACAAWGG-------
Original motif |
Reverse complement motif |
Consensus sequence: HHBDHDDAACAATDRHHHHHBW |
Consensus sequence: WBHHHHHMDATTGTTHDHDVHH |
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Motif ID: |
UP00061 |
Motif name: |
Foxl1_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
1 |
Number of overlap: |
15 |
Similarity score: |
0.0392872 |
Alignment:
ADDDYAWAACAAMAHH
-CCWTTGTYATGCAAA
Original motif |
Reverse complement motif |
Consensus sequence: ADDDYAWAACAAMAHH |
Consensus sequence: HDTYTTGTTWTKDDDT |
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Motif ID: |
UP00041 |
Motif name: |
Foxj1_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
1 |
Number of overlap: |
15 |
Similarity score: |
0.046424 |
Alignment:
HBVBCAYAACAABVH
TTTGCATMACAAWGG
Original motif |
Reverse complement motif |
Consensus sequence: HBVBCAYAACAABVH |
Consensus sequence: DBBTTGTTKTGVVVH |
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Motif ID: |
UP00077 |
Motif name: |
Srf_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
1 |
Number of overlap: |
15 |
Similarity score: |
0.0469262 |
Alignment:
HHVBYTTTTTTTTDDVV
--CCWTTGTYATGCAAA
Original motif |
Reverse complement motif |
Consensus sequence: VBDDAAAAAAAAMVBHH |
Consensus sequence: HHVBYTTTTTTTTDDVV |
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Dataset #: 3 |
Motif ID: 77 |
Motif name: Sox5 |
Original motif |
Reverse complement motif |
Consensus sequence: HAACAAT |
Consensus sequence: ATTGTTH |
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Best Matches for Motif ID 77 (Highest to Lowest)
Motif ID: |
UP00034 |
Motif name: |
Sox7_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
7 |
Number of overlap: |
7 |
Similarity score: |
0 |
Alignment:
WBHHHHHMDATTGTTHDHDVHH
---------ATTGTTH------
Original motif |
Reverse complement motif |
Consensus sequence: HHBDHDDAACAATDRHHHHHBW |
Consensus sequence: WBHHHHHMDATTGTTHDHDVHH |
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Motif ID: |
UP00101 |
Motif name: |
Sox12_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0.00575637 |
Alignment:
THATTGTTVTHAWH
--ATTGTTH-----
Original motif |
Reverse complement motif |
Consensus sequence: THATTGTTVTHAWH |
Consensus sequence: DWTHAVAACAATHA |
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Motif ID: |
UP00064 |
Motif name: |
Sox18_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0.00689336 |
Alignment:
HHDHABAACAATHBWV
-----HAACAAT----
Original motif |
Reverse complement motif |
Consensus sequence: BWBHATTGTTBTHDHH |
Consensus sequence: HHDHABAACAATHBWV |
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Motif ID: |
UP00075 |
Motif name: |
Sox15_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
7 |
Similarity score: |
0.00793479 |
Alignment:
DHVKMWATTGTTHDHDH
------ATTGTTH----
Original motif |
Reverse complement motif |
Consensus sequence: HDDDDAACAATWRRBHD |
Consensus sequence: DHVKMWATTGTTHDHDH |
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Motif ID: |
UP00091 |
Motif name: |
Sox5_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
7 |
Similarity score: |
0.00811912 |
Alignment:
DHDDWATTGTTCDDHD
-----ATTGTTH----
Original motif |
Reverse complement motif |
Consensus sequence: DHDDGAACAATWDDHD |
Consensus sequence: DHDDWATTGTTCDDHD |
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Dataset #: 3 |
Motif ID: 78 |
Motif name: RORA_1 |
Original motif |
Reverse complement motif |
Consensus sequence: AWVDAGGTCA |
Consensus sequence: TGACCTDVWT |
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Best Matches for Motif ID 78 (Highest to Lowest)
Motif ID: |
UP00009 |
Motif name: |
Nr2f2_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
10 |
Similarity score: |
0.0154749 |
Alignment:
DHBHAAAGGTCAHVHB
--AWVDAGGTCA----
Original motif |
Reverse complement motif |
Consensus sequence: DHBHAAAGGTCAHVHB |
Consensus sequence: BHVDTGACCTTTDVDD |
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Motif ID: |
UP00079 |
Motif name: |
Esrra_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
10 |
Similarity score: |
0.0176661 |
Alignment:
HHBVHTGACCTTGVDHD
-----TGACCTDVWT--
Original motif |
Reverse complement motif |
Consensus sequence: DHDBCAAGGTCAHVBDH |
Consensus sequence: HHBVHTGACCTTGVDHD |
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Motif ID: |
UP00048 |
Motif name: |
Rara |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
3 |
Number of overlap: |
10 |
Similarity score: |
0.0189599 |
Alignment:
DHBHAAAGGTCACVHD
--AWVDAGGTCA----
Original motif |
Reverse complement motif |
Consensus sequence: DHBHAAAGGTCACVHD |
Consensus sequence: HHVGTGACCTTTDVDD |
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Motif ID: |
UP00009 |
Motif name: |
Nr2f2_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
10 |
Similarity score: |
0.0331999 |
Alignment:
VBVBCSGGGTCAVBBH
--AWVDAGGTCA----
Original motif |
Reverse complement motif |
Consensus sequence: VBVBCSGGGTCAVBBH |
Consensus sequence: HVBVTGACCCSGBVBV |
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Motif ID: |
UP00066 |
Motif name: |
Hnf4a_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
3 |
Number of overlap: |
10 |
Similarity score: |
0.0341771 |
Alignment:
BDBVMGGGGTCAABHDV
--AWVDAGGTCA-----
Original motif |
Reverse complement motif |
Consensus sequence: BDBVMGGGGTCAABHDV |
Consensus sequence: BHHVTTGACCCCYVVDB |
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Dataset #: 3 |
Motif ID: 79 |
Motif name: Prrx2 |
Original motif |
Reverse complement motif |
Consensus sequence: AATTA |
Consensus sequence: TAATT |
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Best Matches for Motif ID 79 (Highest to Lowest)
Motif ID: |
UP00264 |
Motif name: |
Hoxa1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
5 |
Similarity score: |
0 |
Alignment:
HTDAGCTAATTAMHBY
-------AATTA----
Original motif |
Reverse complement motif |
Consensus sequence: HTDAGCTAATTAMHBY |
Consensus sequence: MBDRTAATTAGCTHAD |
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Motif ID: |
UP00145 |
Motif name: |
Barhl2 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
5 |
Similarity score: |
4.33852e-05 |
Alignment:
HHBTTAATTGDTTYTH
----TAATT-------
Original motif |
Reverse complement motif |
Consensus sequence: HAMAAHCAATTAABHH |
Consensus sequence: HHBTTAATTGDTTYTH |
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Motif ID: |
UP00132 |
Motif name: |
Evx2 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
7 |
Number of overlap: |
5 |
Similarity score: |
0.000403033 |
Alignment:
WRBGCTAATTAGCRGBB
------AATTA------
Original motif |
Reverse complement motif |
Consensus sequence: BVCMGCTAATTAGCBKW |
Consensus sequence: WRBGCTAATTAGCRGBB |
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Motif ID: |
UP00167 |
Motif name: |
En1 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
8 |
Number of overlap: |
5 |
Similarity score: |
0.000612413 |
Alignment:
VHRKTAATTAGTTVVV
----TAATT-------
Original motif |
Reverse complement motif |
Consensus sequence: VVVAACTAATTARKDV |
Consensus sequence: VHRKTAATTAGTTVVV |
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Motif ID: |
UP00171 |
Motif name: |
Msx3 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
5 |
Similarity score: |
0.000838245 |
Alignment:
VAHAACYAATTAABHH
-------AATTA----
Original motif |
Reverse complement motif |
Consensus sequence: VAHAACYAATTAABHH |
Consensus sequence: HHVTTAATTKGTTHTV |
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Dataset #: 3 |
Motif ID: 80 |
Motif name: Pou5f1 |
Original motif |
Reverse complement motif |
Consensus sequence: CWTTGTHATGCAAAT |
Consensus sequence: ATTTGCATHACAAWG |
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Best Matches for Motif ID 80 (Highest to Lowest)
Motif ID: |
UP00039 |
Motif name: |
Foxj3_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
1 |
Number of overlap: |
15 |
Similarity score: |
0.0376287 |
Alignment:
HDBAHCAWAACADWDVD
ATTTGCATHACAAWG--
Original motif |
Reverse complement motif |
Consensus sequence: HDBAHCAWAACADWDVD |
Consensus sequence: DVHWDTGTTWTGDTBDH |
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Motif ID: |
UP00150 |
Motif name: |
Irx6 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
15 |
Similarity score: |
0.0420168 |
Alignment:
AHWDBTACATGTADHTH
-CWTTGTHATGCAAAT-
Original motif |
Reverse complement motif |
Consensus sequence: HAHDTACATGTAVDWHT |
Consensus sequence: AHWDBTACATGTADHTH |
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Motif ID: |
UP00194 |
Motif name: |
Irx4 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
15 |
Similarity score: |
0.0420967 |
Alignment:
DBTWTWACATGTWDHDW
-CWTTGTHATGCAAAT-
Original motif |
Reverse complement motif |
Consensus sequence: WDHDWACATGTWAWABD |
Consensus sequence: DBTWTWACATGTWDHDW |
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Motif ID: |
UP00098 |
Motif name: |
Rfx3_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
15 |
Similarity score: |
0.0432112 |
Alignment:
BDBBVBVGTAWCCAAGVBHBAGB
-ATTTGCATHACAAWG-------
Original motif |
Reverse complement motif |
Consensus sequence: VCTBHBVCTTGGWTACVVVVVDB |
Consensus sequence: BDBBVBVGTAWCCAAGVBHBAGB |
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Motif ID: |
UP00250 |
Motif name: |
Irx5 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
2 |
Number of overlap: |
15 |
Similarity score: |
0.0474325 |
Alignment:
WVTDHWACATGTWHDDD
-CWTTGTHATGCAAAT-
Original motif |
Reverse complement motif |
Consensus sequence: DDDHWACATGTWHDABW |
Consensus sequence: WVTDHWACATGTWHDDD |
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Dataset #: 3 |
Motif ID: 81 |
Motif name: Pax4 |
Original motif |
Reverse complement motif |
Consensus sequence: RAAWAWTWDCMVHHVBBHHHVHMHCMCYMC |
Consensus sequence: GRKGRGDRHVHDDVBBHHBRGDWAWTWTTM |
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Best Matches for Motif ID 81 (Highest to Lowest)
Motif ID: |
UP00540 |
Motif name: |
Gli3_v016060_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
1 |
Number of overlap: |
23 |
Similarity score: |
0.0506561 |
Alignment:
-------VYWVVHCRCCACMCACGAHSBHH
RAAWAWTWDCMVHHVBBHHHVHMHCMCYMC
Original motif |
Reverse complement motif |
Consensus sequence: VYWVVHCRCCACMCACGAHSBHH |
Consensus sequence: HHBSHTCGTGRGTGGKGDBVWMV |
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Motif ID: |
UP00538 |
Motif name: |
Gli1_v015681_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
7 |
Number of overlap: |
23 |
Similarity score: |
0.0526364 |
Alignment:
-------MHHHWHYTMCCHCCCACVAABVH
RAAWAWTWDCMVHHVBBHHHVHMHCMCYMC------
Original motif |
Reverse complement motif |
Consensus sequence: MHHHWHYTMCCHCCCACVAABVH |
Consensus sequence: DVVTTVGTGGGHGGYAMHWHHHY |
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Motif ID: |
UP00538 |
Motif name: |
Gli1_v016060_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
1 |
Number of overlap: |
23 |
Similarity score: |
0.0547526 |
Alignment:
-------HVBDAGCGBGGGTGGCRDBDDDB
RAAWAWTWDCMVHHVBBHHHVHMHCMCYMC
Original motif |
Reverse complement motif |
Consensus sequence: HVBDAGCGBGGGTGGCRDBDDDB |
Consensus sequence: BDDHVDKGCCACCCVCGCTDBVH |
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Motif ID: |
UP00400 |
Motif name: |
Zif268 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
23 |
Similarity score: |
0.0550408 |
Alignment:
BADHBDHCGCCCMCGCAHHDBBV-------
---RAAWAWTWDCMVHHVBBHHHVHMHCMCYMC
Original motif |
Reverse complement motif |
Consensus sequence: BADHBDHCGCCCMCGCAHHDBBV |
Consensus sequence: VVVDHHTGCGYGGGCGDHVHHTB |
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Motif ID: |
UP00528 |
Motif name: |
Foxm1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
23 |
Similarity score: |
0.0559551 |
Alignment:
-------VHVRCAYGATGCATCDTVVADTH
GRKGRGDRHVHDDVBBHHBRGDWAWTWTTM---
Original motif |
Reverse complement motif |
Consensus sequence: HADTBVADGATGCATCMTGMVHB |
Consensus sequence: VHVRCAYGATGCATCDTVVADTH |
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Dataset #: 3 |
Motif ID: 82 |
Motif name: HNF1B |
Original motif |
Reverse complement motif |
Consensus sequence: TTAATRWTTAAC |
Consensus sequence: GTTAAWKATTAA |
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Best Matches for Motif ID 82 (Highest to Lowest)
Motif ID: |
UP00196 |
Motif name: |
Hoxa4 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
12 |
Similarity score: |
0.00579799 |
Alignment:
CVRGTTAATTAATHADH
---GTTAAWKATTAA--
Original motif |
Reverse complement motif |
Consensus sequence: DDTHATTAATTAACKBG |
Consensus sequence: CVRGTTAATTAATHADH |
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Motif ID: |
UP00222 |
Motif name: |
Tcf2 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
12 |
Similarity score: |
0.0172357 |
Alignment:
ABDBCTAGTTAACVBBD
-TTAATRWTTAAC----
Original motif |
Reverse complement motif |
Consensus sequence: DBBBGTTAACTAGBHBT |
Consensus sequence: ABDBCTAGTTAACVBBD |
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Motif ID: |
UP00237 |
Motif name: |
Otp |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
3 |
Number of overlap: |
12 |
Similarity score: |
0.0183959 |
Alignment:
VVHDRTTAATTAAYDDG
--TTAATRWTTAAC---
Original motif |
Reverse complement motif |
Consensus sequence: VVHDRTTAATTAAYDDG |
Consensus sequence: CHDMTTAATTAAKDHVV |
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Motif ID: |
UP00144 |
Motif name: |
Hoxb4 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
12 |
Similarity score: |
0.0185132 |
Alignment:
DDTHATTAATTAAMDVG
--TTAATRWTTAAC---
Original motif |
Reverse complement motif |
Consensus sequence: CVHRTTAATTAATHAHH |
Consensus sequence: DDTHATTAATTAAMDVG |
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Motif ID: |
UP00141 |
Motif name: |
Vsx1 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
12 |
Similarity score: |
0.0190281 |
Alignment:
CVHRTTAATTAAHDAHB
---GTTAAWKATTAA--
Original motif |
Reverse complement motif |
Consensus sequence: CVHRTTAATTAAHDAHB |
Consensus sequence: VHTDHTTAATTAAMHVG |
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Dataset #: 3 |
Motif ID: 83 |
Motif name: NR2F1 |
Original motif |
Reverse complement motif |
Consensus sequence: TGAMCTTTGMMCYT |
Consensus sequence: AKGYYCAAAGRTCA |
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Best Matches for Motif ID 83 (Highest to Lowest)
Motif ID: |
UP00083 |
Motif name: |
Tcf7l2_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
14 |
Similarity score: |
0.0452364 |
Alignment:
DDDYCCTTTGATSTDDV
-TGAMCTTTGMMCYT--
Original motif |
Reverse complement motif |
Consensus sequence: DDDYCCTTTGATSTDDV |
Consensus sequence: BDDASATCAAAGGMDDD |
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Motif ID: |
UP00067 |
Motif name: |
Lef1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
2 |
Number of overlap: |
14 |
Similarity score: |
0.0453449 |
Alignment:
VDDAGATCAAAGGKDDD
--AKGYYCAAAGRTCA-
Original motif |
Reverse complement motif |
Consensus sequence: DDDYCCTTTGATCTDDV |
Consensus sequence: VDDAGATCAAAGGKDDD |
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Motif ID: |
UP00539 |
Motif name: |
Gli2_v015681_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
8 |
Number of overlap: |
14 |
Similarity score: |
0.0461358 |
Alignment:
DVMHHDHKGACCCTCCTSVCBH
-------TGAMCTTTGMMCYT-
Original motif |
Reverse complement motif |
Consensus sequence: HVGVSAGGAGGGTCYHHHHYVH |
Consensus sequence: DVMHHDHKGACCCTCCTSVCBH |
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Motif ID: |
UP00054 |
Motif name: |
Tcf7_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
2 |
Number of overlap: |
14 |
Similarity score: |
0.0461768 |
Alignment:
BHHASATCAAAGGAHHH
--AKGYYCAAAGRTCA-
Original motif |
Reverse complement motif |
Consensus sequence: BHHASATCAAAGGAHHH |
Consensus sequence: HHHTCCTTTGATSTHHV |
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Motif ID: |
UP00058 |
Motif name: |
Tcf3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
2 |
Number of overlap: |
14 |
Similarity score: |
0.0473628 |
Alignment:
HHHASATCAAAGVRHHH
--AKGYYCAAAGRTCA-
Original motif |
Reverse complement motif |
Consensus sequence: HHHASATCAAAGVRHHH |
Consensus sequence: HHHKVCTTTGATSTHHH |
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Dataset #: 3 |
Motif ID: 84 |
Motif name: NR1H2RXRA |
Original motif |
Reverse complement motif |
Consensus sequence: AAAGGTCAAAGGTCAAC |
Consensus sequence: GTTGACCTTTGACCTTT |
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Best Matches for Motif ID 84 (Highest to Lowest)
Motif ID: |
UP00539 |
Motif name: |
Gli2_v015681_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
1 |
Number of overlap: |
17 |
Similarity score: |
0.0538452 |
Alignment:
DVMHHDHKGACCCTCCTSVCBH
-----GTTGACCTTTGACCTTT
Original motif |
Reverse complement motif |
Consensus sequence: HVGVSAGGAGGGTCYHHHHYVH |
Consensus sequence: DVMHHDHKGACCCTCCTSVCBH |
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Motif ID: |
UP00032 |
Motif name: |
Gata3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
1 |
Number of overlap: |
17 |
Similarity score: |
0.0545098 |
Alignment:
BDHDDADAGATAAGADHBDHVD
-----AAAGGTCAAAGGTCAAC
Original motif |
Reverse complement motif |
Consensus sequence: BDHDDADAGATAAGADHBDHVD |
Consensus sequence: HBHDVHDTCTTATCTHTDDHDV |
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Motif ID: |
UP00067 |
Motif name: |
Lef1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
16 |
Similarity score: |
0.521114 |
Alignment:
VDDAGATCAAAGGKDDD-
-AAAGGTCAAAGGTCAAC
Original motif |
Reverse complement motif |
Consensus sequence: DDDYCCTTTGATCTDDV |
Consensus sequence: VDDAGATCAAAGGKDDD |
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Motif ID: |
UP00083 |
Motif name: |
Tcf7l2_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
16 |
Similarity score: |
0.527825 |
Alignment:
BDDASATCAAAGGMDDD-
-GTTGACCTTTGACCTTT
Original motif |
Reverse complement motif |
Consensus sequence: DDDYCCTTTGATSTDDV |
Consensus sequence: BDDASATCAAAGGMDDD |
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Motif ID: |
UP00054 |
Motif name: |
Tcf7_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
16 |
Similarity score: |
0.531154 |
Alignment:
BHHASATCAAAGGAHHH-
-AAAGGTCAAAGGTCAAC
Original motif |
Reverse complement motif |
Consensus sequence: BHHASATCAAAGGAHHH |
Consensus sequence: HHHTCCTTTGATSTHHV |
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Dataset #: 3 |
Motif ID: 85 |
Motif name: Nobox |
Original motif |
Reverse complement motif |
Consensus sequence: TAATTRSY |
Consensus sequence: MSMAATTA |
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Best Matches for Motif ID 85 (Highest to Lowest)
Motif ID: |
UP00181 |
Motif name: |
Barx1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
MHRVYAATTRSYDHAW
----TAATTRSY----
Original motif |
Reverse complement motif |
Consensus sequence: MHRVYAATTRSYDHAW |
Consensus sequence: WTHHMSKAATTMVKHY |
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Motif ID: |
UP00124 |
Motif name: |
Ipf1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.000478222 |
Alignment:
VVRBTAATTAGYHCAD
----TAATTRSY----
Original motif |
Reverse complement motif |
Consensus sequence: VVRBTAATTAGYHCAD |
Consensus sequence: DTGHKCTAATTABMBB |
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Motif ID: |
UP00166 |
Motif name: |
Barhl1 |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.00170663 |
Alignment:
HAHAACCAATTARBDH
----MSMAATTA----
Original motif |
Reverse complement motif |
Consensus sequence: HAHAACCAATTARBDH |
Consensus sequence: DDVKTAATTGGTTDTH |
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Motif ID: |
UP00129 |
Motif name: |
Pou3f1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
9 |
Number of overlap: |
8 |
Similarity score: |
0.00260091 |
Alignment:
DAVTTAATTAATTAVBD
--------TAATTRSY-
Original motif |
Reverse complement motif |
Consensus sequence: DVBTAATTAATTAABTH |
Consensus sequence: DAVTTAATTAATTAVBD |
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Motif ID: |
UP00200 |
Motif name: |
Nkx6-1_2825.1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
7 |
Number of overlap: |
8 |
Similarity score: |
0.00284029 |
Alignment:
DVHAATTAATTAMYBBG
------TAATTRSY---
Original motif |
Reverse complement motif |
Consensus sequence: DVHAATTAATTAMYBBG |
Consensus sequence: CBVMRTAATTAATTHBH |
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Dataset #: 3 |
Motif ID: 86 |
Motif name: FOXO3 |
Original motif |
Reverse complement motif |
Consensus sequence: KGTAAACA |
Consensus sequence: TGTTTACR |
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Best Matches for Motif ID 86 (Highest to Lowest)
Motif ID: |
UP00025 |
Motif name: |
Foxk1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0 |
Alignment:
BBVTTTGTTTACATTDD
-----TGTTTACR----
Original motif |
Reverse complement motif |
Consensus sequence: DDAATGTAAACAAAVVB |
Consensus sequence: BBVTTTGTTTACATTDD |
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Motif ID: |
UP00061 |
Motif name: |
Foxl1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.00864258 |
Alignment:
DWAATRTAAACAAWVVB
----KGTAAACA-----
Original motif |
Reverse complement motif |
Consensus sequence: DWAATRTAAACAAWVVB |
Consensus sequence: VVVWTTGTTTAMATTWD |
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Motif ID: |
UP00039 |
Motif name: |
Foxj3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
8 |
Similarity score: |
0.0124177 |
Alignment:
HDHADGTAAACAAAVVH
----KGTAAACA-----
Original motif |
Reverse complement motif |
Consensus sequence: HDHADGTAAACAAAVVH |
Consensus sequence: DVVTTTGTTTACDTHDH |
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Motif ID: |
UP00073 |
Motif name: |
Foxa2_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
8 |
Similarity score: |
0.0130125 |
Alignment:
HHWAWGTAAAYAAAVDB
----KGTAAACA-----
Original motif |
Reverse complement motif |
Consensus sequence: HHWAWGTAAAYAAAVDB |
Consensus sequence: BDVTTTKTTTACWTWHH |
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Motif ID: |
UP00041 |
Motif name: |
Foxj1_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
3 |
Number of overlap: |
8 |
Similarity score: |
0.0166678 |
Alignment:
HDHRTAAACAAAHDDD
--KGTAAACA------
Original motif |
Reverse complement motif |
Consensus sequence: HDHRTAAACAAAHDDD |
Consensus sequence: DDDHTTTGTTTAMHDH |
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Dataset #: 3 |
Motif ID: 87 |
Motif name: SOX9 |
Original motif |
Reverse complement motif |
Consensus sequence: DAACAATRG |
Consensus sequence: CMATTGTTH |
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Best Matches for Motif ID 87 (Highest to Lowest)
Motif ID: |
UP00034 |
Motif name: |
Sox7_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
8 |
Number of overlap: |
9 |
Similarity score: |
0 |
Alignment:
HHBDHDDAACAATDRHHHHHBW
------DAACAATRG-------
Original motif |
Reverse complement motif |
Consensus sequence: HHBDHDDAACAATDRHHHHHBW |
Consensus sequence: WBHHHHHMDATTGTTHDHDVHH |
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Motif ID: |
UP00023 |
Motif name: |
Sox30_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
9 |
Similarity score: |
0.00334802 |
Alignment:
DHDBAACAATDRHHHH
---DAACAATRG----
Original motif |
Reverse complement motif |
Consensus sequence: DHDBAACAATDRHHHH |
Consensus sequence: HHHHMHATTGTTBDHD |
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Motif ID: |
UP00064 |
Motif name: |
Sox18_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
9 |
Similarity score: |
0.00846463 |
Alignment:
BWBHATTGTTBTHDHH
--CMATTGTTH-----
Original motif |
Reverse complement motif |
Consensus sequence: BWBHATTGTTBTHDHH |
Consensus sequence: HHDHABAACAATHBWV |
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Motif ID: |
UP00051 |
Motif name: |
Sox8_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
9 |
Similarity score: |
0.00854664 |
Alignment:
DDATBWATTGTTHHDDD
----CMATTGTTH----
Original motif |
Reverse complement motif |
Consensus sequence: DDATBWATTGTTHHDDD |
Consensus sequence: DDDHDAACAATWBATDD |
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Motif ID: |
UP00016 |
Motif name: |
Sry_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
9 |
Similarity score: |
0.00857614 |
Alignment:
HHDHDRAACAATDDVHV
-----DAACAATRG---
Original motif |
Reverse complement motif |
Consensus sequence: HHDHDRAACAATDDVHV |
Consensus sequence: VHVHDATTGTTMHDDDH |
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Dataset #: 4 |
Motif ID: 88 |
Motif name: ygCTyTTCsg |
Original motif |
Reverse complement motif |
Consensus sequence: HDCTYTTCGB |
Consensus sequence: BCGAAMAGHH |
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Best Matches for Motif ID 88 (Highest to Lowest)
Motif ID: |
UP00100 |
Motif name: |
Gata6_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
4 |
Number of overlap: |
10 |
Similarity score: |
0 |
Alignment:
DHDVDWGATAAGADDHV
----BCGAAMAGHH---
Original motif |
Reverse complement motif |
Consensus sequence: DHDVDWGATAAGADDHV |
Consensus sequence: VHDDTCTTATCWHBDHD |
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Motif ID: |
UP00080 |
Motif name: |
Gata5_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
4 |
Number of overlap: |
10 |
Similarity score: |
0.00162374 |
Alignment:
DDHBKCTTATCAGDDDH
---HDCTYTTCGB----
Original motif |
Reverse complement motif |
Consensus sequence: HDDDCTGATAAGRVDDD |
Consensus sequence: DDHBKCTTATCAGDDDH |
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Motif ID: |
UP00422 |
Motif name: |
Etv3 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
10 |
Similarity score: |
0.00476259 |
Alignment:
VBBHAYTTCCGGTHDH
-HDCTYTTCGB-----
Original motif |
Reverse complement motif |
Consensus sequence: VBBHAYTTCCGGTHDH |
Consensus sequence: DHHACCGGAAKTHBBB |
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Motif ID: |
UP00032 |
Motif name: |
Gata3_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
7 |
Number of overlap: |
10 |
Similarity score: |
0.00596836 |
Alignment:
BDHDDADAGATAAGADHBDHVD
------BCGAAMAGHH------
Original motif |
Reverse complement motif |
Consensus sequence: BDHDDADAGATAAGADHBDHVD |
Consensus sequence: HBHDVHDTCTTATCTHTDDHDV |
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Motif ID: |
UP00018 |
Motif name: |
Irf4_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
2 |
Number of overlap: |
10 |
Similarity score: |
0.00611579 |
Alignment:
VDDAYCGAAACYDVA
----BCGAAMAGHH-
Original motif |
Reverse complement motif |
Consensus sequence: VDDAYCGAAACYDVA |
Consensus sequence: TBDKGTTTCGMTDHV |
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Dataset #: 4 |
Motif ID: 89 |
Motif name: aaACAAAACaa |
Original motif |
Reverse complement motif |
Consensus sequence: AAACAAAACHV |
Consensus sequence: BHGTTTTGTTT |
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Best Matches for Motif ID 89 (Highest to Lowest)
Motif ID: |
UP00040 |
Motif name: |
Irf5_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Forward |
Position number: |
2 |
Number of overlap: |
11 |
Similarity score: |
0 |
Alignment:
BDKGTTTCGKTWDDD
-BHGTTTTGTTT---
Original motif |
Reverse complement motif |
Consensus sequence: DDDWAYCGAAACYDV |
Consensus sequence: BDKGTTTCGKTWDDD |
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Motif ID: |
UP00039 |
Motif name: |
Foxj3_secondary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
11 |
Similarity score: |
0.00609972 |
Alignment:
DVHWDTGTTWTGDTBDH
----BHGTTTTGTTT--
Original motif |
Reverse complement motif |
Consensus sequence: HDBAHCAWAACADWDVD |
Consensus sequence: DVHWDTGTTWTGDTBDH |
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Motif ID: |
UP00062 |
Motif name: |
Sox4_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
5 |
Number of overlap: |
11 |
Similarity score: |
0.00979154 |
Alignment:
HBDDDAACAAAGRVBHH
----AAACAAAACHV--
Original motif |
Reverse complement motif |
Consensus sequence: HBDDDAACAAAGRVBHH |
Consensus sequence: HHBBMCTTTGTTHDDBH |
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Motif ID: |
UP00018 |
Motif name: |
Irf4_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Reverse Complement |
Matching format of second motif: |
Reverse Complement |
Direction: |
Backward |
Position number: |
3 |
Number of overlap: |
11 |
Similarity score: |
0.0107372 |
Alignment:
TBDKGTTTCGMTDHV
--BHGTTTTGTTT--
Original motif |
Reverse complement motif |
Consensus sequence: VDDAYCGAAACYDVA |
Consensus sequence: TBDKGTTTCGMTDHV |
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Motif ID: |
UP00074 |
Motif name: |
Isgf3g_primary |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
2 |
Number of overlap: |
11 |
Similarity score: |
0.0120963 |
Alignment:
VDRAAWCGAAACTDA
---AAACAAAACHV-
Original motif |
Reverse complement motif |
Consensus sequence: VDRAAWCGAAACTDA |
Consensus sequence: TDAGTTTCGWTTKDV |
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Dataset #: 4 |
Motif ID: 90 |
Motif name: ymTACATAyw |
Original motif |
Reverse complement motif |
Consensus sequence: HHTACATABD |
Consensus sequence: DBTATGTAHH |
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Best Matches for Motif ID 90 (Highest to Lowest)
Motif ID: |
UP00223 |
Motif name: |
Irx3_2226.1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
10 |
Similarity score: |
0.0125176 |
Alignment:
DDDHTACATGTAVWDHD
--HHTACATABD-----
Original motif |
Reverse complement motif |
Consensus sequence: DDDHTACATGTAVWDHD |
Consensus sequence: DHDWBTACATGTAHDDD |
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Motif ID: |
UP00250 |
Motif name: |
Irx5 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
3 |
Number of overlap: |
10 |
Similarity score: |
0.0128452 |
Alignment:
DDDHWACATGTWHDABW
--HHTACATABD-----
Original motif |
Reverse complement motif |
Consensus sequence: DDDHWACATGTWHDABW |
Consensus sequence: WVTDHWACATGTWHDDD |
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Motif ID: |
UP00223 |
Motif name: |
Irx3_0920.1 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
10 |
Similarity score: |
0.0136843 |
Alignment:
DDDDTACATGTAVWWHD
--HHTACATABD-----
Original motif |
Reverse complement motif |
Consensus sequence: DDDDTACATGTAVWWHD |
Consensus sequence: DDWWBTACATGTADDDD |
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Motif ID: |
UP00236 |
Motif name: |
Irx2 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Backward |
Position number: |
6 |
Number of overlap: |
10 |
Similarity score: |
0.0146278 |
Alignment:
WDDDTACATGTADDWBW
--HHTACATABD-----
Original motif |
Reverse complement motif |
Consensus sequence: WDDDTACATGTADDWBW |
Consensus sequence: WVWDDTACATGTADDDW |
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Motif ID: |
UP00150 |
Motif name: |
Irx6 |
Species: |
Mus musculus |
Matching format of first motif: |
Original Motif |
Matching format of second motif: |
Original Motif |
Direction: |
Forward |
Position number: |
3 |
Number of overlap: |
10 |
Similarity score: |
0.0149892 |
Alignment:
HAHDTACATGTAVDWHT
--HHTACATABD-----