MOTIFSIM - MOTIF SIMilarity Detection Tool

Version 2.2

INPUT

Input Parameters
Number of files: 4
Number of top significant motifs: 10
Number of best matches: 10
Similarity cutoff >= 0.75
Matching motif database: UniProbe Mus Musculus
Motif tree: Yes
Combined similar motifs: Yes
Output file type: All
Output file format: All

Input files and motif counts
File name Count of motifs Dataset number
DREME_DM721.txt 16 1
MEME-ChIP_DM721.txt 11 2
PScanChIP_DM721.txt 37 3
RSAT_peak-motifs_DM721.txt 40 4

RESULTS

Top 10 Significant Motifs - Global Matching (Highest to Lowest)

Dataset #: 2 Motif ID: 18 Motif name: Motif 18

Original motif     Consensus sequence: AMACA Reverse complement motif     Consensus sequence: TGTRT

Best Matches for Top Significant Motif ID 18 (Highest to Lowest)

Dataset #: 1
Motif ID: 2
Motif name: Motif 2
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 5
Similarity score: 0

Alignment:
CACACACA
---AMACA

Original motif     Consensus sequence: CACACACA Reverse complement motif     Consensus sequence: TGTGTGTG


Dataset #: 4
Motif ID: 79
Motif name: CACACACACACA
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 5
Similarity score: 0.0148279

Alignment:
TGTGTGTGTGTG
--TGTRT-----

Original motif     Consensus sequence: CACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTG


Dataset #: 4
Motif ID: 95
Motif name: CACACACACACA
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 5
Similarity score: 0.0228414

Alignment:
CACACACACACA
---AMACA----

Original motif     Consensus sequence: CACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTG


Dataset #: 4
Motif ID: 69
Motif name: aaACAAAACaa
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 6
Number of overlap: 5
Similarity score: 0.0274014

Alignment:
AAACAAAACAA
-----AMACA-

Original motif     Consensus sequence: AAACAAAACAA Reverse complement motif     Consensus sequence: TTGTTTTGTTT


Dataset #: 4
Motif ID: 86
Motif name: aaCAAAAACaa
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 6
Number of overlap: 5
Similarity score: 0.0291354

Alignment:
HHCAAAAACAH
-----AMACA-

Original motif     Consensus sequence: HHCAAAAACAH Reverse complement motif     Consensus sequence: HTGTTTTTGHH


Dataset #: 4
Motif ID: 97
Motif name: ryayAyAyrtGTRTrTry
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 10
Number of overlap: 5
Similarity score: 0.0293401

Alignment:
HDAMACACAKKTKTKTHD
----AMACA---------

Original motif     Consensus sequence: DHAYAYAYRTGTGTRTDH Reverse complement motif     Consensus sequence: HDAMACACAKKTKTKTHD


Dataset #: 4
Motif ID: 100
Motif name: wrTGTATACAyw
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 6
Number of overlap: 5
Similarity score: 0.0302831

Alignment:
HDTGTATACAHD
--TGTRT-----

Original motif     Consensus sequence: HDTGTATACAHD Reverse complement motif     Consensus sequence: DHTGTATACADH


Dataset #: 1
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 5
Similarity score: 0.0378142

Alignment:
AAAASAAA
-AMACA--

Original motif     Consensus sequence: AAAASAAA Reverse complement motif     Consensus sequence: TTTSTTTT


Dataset #: 4
Motif ID: 92
Motif name: tyTCTkTkTCyy
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 5
Number of overlap: 5
Similarity score: 0.0390126

Alignment:
VHGARAYAGAVV
---AMACA----

Original motif     Consensus sequence: BBTCTKTKTCHB Reverse complement motif     Consensus sequence: VHGARAYAGAVV


Dataset #: 1
Motif ID: 14
Motif name: Motif 14
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 5
Similarity score: 0.042464

Alignment:
GKGTGKGC
-TGTRT--

Original motif     Consensus sequence: GCRCACRC Reverse complement motif     Consensus sequence: GKGTGKGC


Dataset #: 3 Motif ID: 30 Motif name: ZEB1

Original motif     Consensus sequence: CACCTD Reverse complement motif     Consensus sequence: HAGGTG

Best Matches for Top Significant Motif ID 30 (Highest to Lowest)

Dataset #: 4
Motif ID: 89
Motif name: ccCCmCACCcc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.0148347

Alignment:
HBCCMCACCHH
-----CACCTD

Original motif     Consensus sequence: HBCCMCACCHH Reverse complement motif     Consensus sequence: DDGGTGRGGBD


Dataset #: 4
Motif ID: 93
Motif name: rrAGGGGGArr
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 6
Similarity score: 0.0194512

Alignment:
VVAGGGGGAVV
-HAGGTG----

Original motif     Consensus sequence: VVAGGGGGAVV Reverse complement motif     Consensus sequence: VVTCCCCCTVV


Dataset #: 4
Motif ID: 75
Motif name: yayAyAyACATrya
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 7
Number of overlap: 6
Similarity score: 0.0270731

Alignment:
HACAYAYACATRHD
------CACCTD--

Original motif     Consensus sequence: HACAYAYACATRHD Reverse complement motif     Consensus sequence: DHKATGTKTKTGTD


Dataset #: 4
Motif ID: 97
Motif name: ryayAyAyrtGTRTrTry
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 6
Number of overlap: 6
Similarity score: 0.0321302

Alignment:
HDAMACACAKKTKTKTHD
-----CACCTD-------

Original motif     Consensus sequence: DHAYAYAYRTGTGTRTDH Reverse complement motif     Consensus sequence: HDAMACACAKKTKTKTHD


Dataset #: 4
Motif ID: 96
Motif name: yrTGTGCACAyr
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0.0342918

Alignment:
BVTGTGCACABV
HAGGTG------

Original motif     Consensus sequence: BVTGTGCACABV Reverse complement motif     Consensus sequence: BBTGTGCACAVV


Dataset #: 4
Motif ID: 91
Motif name: ssCGCCsCCrCCCss
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 9
Number of overlap: 6
Similarity score: 0.0456166

Alignment:
SSCGCCSCCGCCCSS
--------CACCTD-

Original motif     Consensus sequence: SSCGCCSCCGCCCSS Reverse complement motif     Consensus sequence: SSGGGCGGSGGCGSS


Dataset #: 1
Motif ID: 4
Motif name: Motif 4
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.0458702

Alignment:
CYBCCTCC
-CACCTD-

Original motif     Consensus sequence: CYBCCTCC Reverse complement motif     Consensus sequence: GGAGGVMG


Dataset #: 4
Motif ID: 84
Motif name: wsAGCTACwy
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 6
Similarity score: 0.0461351

Alignment:
VHGTAGCTVD
---CACCTD-

Original motif     Consensus sequence: DVAGCTACHB Reverse complement motif     Consensus sequence: VHGTAGCTVD


Dataset #: 4
Motif ID: 88
Motif name: ssCrCYyYCGss
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 6
Similarity score: 0.0554152

Alignment:
BBCRCCYCCGBB
--CACCTD----

Original motif     Consensus sequence: BBCRCCYCCGBB Reverse complement motif     Consensus sequence: BBCGGKGGMGBB


Dataset #: 4
Motif ID: 90
Motif name: ssCGsCwsCss
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.0564656

Alignment:
BBCGSCWSCBB
-----CACCTD

Original motif     Consensus sequence: BBCGSCWSCBB Reverse complement motif     Consensus sequence: BBGSWGSCGBB


Dataset #: 1 Motif ID: 7 Motif name: Motif 7

Original motif     Consensus sequence: ASASAGAA Reverse complement motif     Consensus sequence: TTCTSTST

Best Matches for Top Significant Motif ID 7 (Highest to Lowest)

Dataset #: 4
Motif ID: 92
Motif name: tyTCTkTkTCyy
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.00355249

Alignment:
BBTCTKTKTCHB
-TTCTSTST---

Original motif     Consensus sequence: BBTCTKTKTCHB Reverse complement motif     Consensus sequence: VHGARAYAGAVV


Dataset #: 4
Motif ID: 69
Motif name: aaACAAAACaa
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0313478

Alignment:
AAACAAAACAA
ASASAGAA---

Original motif     Consensus sequence: AAACAAAACAA Reverse complement motif     Consensus sequence: TTGTTTTGTTT


Dataset #: 4
Motif ID: 82
Motif name: rmACAGCAGsr
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0319191

Alignment:
DVCTGCTGTVB
---TTCTSTST

Original motif     Consensus sequence: VVACAGCAGVD Reverse complement motif     Consensus sequence: DVCTGCTGTVB


Dataset #: 4
Motif ID: 95
Motif name: CACACACACACA
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0398795

Alignment:
TGTGTGTGTGTG
-TTCTSTST---

Original motif     Consensus sequence: CACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTG


Dataset #: 4
Motif ID: 79
Motif name: CACACACACACA
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0407034

Alignment:
TGTGTGTGTGTG
-TTCTSTST---

Original motif     Consensus sequence: CACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTG


Dataset #: 4
Motif ID: 102
Motif name: AAAAAAAAAAA
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0441956

Alignment:
AAAAAAAAAAA
ASASAGAA---

Original motif     Consensus sequence: AAAAAAAAAAA Reverse complement motif     Consensus sequence: TTTTTTTTTTT


Dataset #: 2
Motif ID: 26
Motif name: Motif 26
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 5
Number of overlap: 8
Similarity score: 0.0451851

Alignment:
AAAAAAACAAARRA
--ASASAGAA----

Original motif     Consensus sequence: TKKTTTGTTTTTTT Reverse complement motif     Consensus sequence: AAAAAAACAAARRA


Dataset #: 2
Motif ID: 27
Motif name: Motif 27
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0493389

Alignment:
TGTGTGTGTGTKTG
-----TTCTSTST-

Original motif     Consensus sequence: CAYACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTKTG


Dataset #: 2
Motif ID: 25
Motif name: Motif 25
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 6
Number of overlap: 8
Similarity score: 0.0494079

Alignment:
CACACAVRCACACA
-----ASASAGAA-

Original motif     Consensus sequence: CACACAVRCACACA Reverse complement motif     Consensus sequence: TGTGTGKVTGTGTG


Dataset #: 3
Motif ID: 48
Motif name: EWSR1-FLI1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 8
Number of overlap: 8
Similarity score: 0.0559328

Alignment:
CCTTCCTTCCTTCCTTCC
---TTCTSTST-------

Original motif     Consensus sequence: GGAAGGAAGGAAGGAAGG Reverse complement motif     Consensus sequence: CCTTCCTTCCTTCCTTCC


Dataset #: 2 Motif ID: 21 Motif name: Motif 21

Original motif     Consensus sequence: ATKTM Reverse complement motif     Consensus sequence: RARAT

Best Matches for Top Significant Motif ID 21 (Highest to Lowest)

Dataset #: 1
Motif ID: 15
Motif name: Motif 15
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 5
Similarity score: 0.0065927

Alignment:
CATTTKC
-ATKTM-

Original motif     Consensus sequence: GRAAATG Reverse complement motif     Consensus sequence: CATTTKC


Dataset #: 1
Motif ID: 10
Motif name: Motif 10
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 5
Similarity score: 0.0217628

Alignment:
TAMATA
-RARAT

Original motif     Consensus sequence: TAMATA Reverse complement motif     Consensus sequence: TATRTA


Dataset #: 4
Motif ID: 85
Motif name: wtATTTTTAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 5
Similarity score: 0.0314602

Alignment:
DDTAAAAATHD
----RARAT--

Original motif     Consensus sequence: DHATTTTTADD Reverse complement motif     Consensus sequence: DDTAAAAATHD


Dataset #: 4
Motif ID: 71
Motif name: wyATTTTAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 5
Similarity score: 0.0314958

Alignment:
DDTAAAATHD
---RARAT--

Original motif     Consensus sequence: DHATTTTADD Reverse complement motif     Consensus sequence: DDTAAAATHD


Dataset #: 4
Motif ID: 92
Motif name: tyTCTkTkTCyy
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 6
Number of overlap: 5
Similarity score: 0.0326182

Alignment:
VHGARAYAGAVV
--RARAT-----

Original motif     Consensus sequence: BBTCTKTKTCHB Reverse complement motif     Consensus sequence: VHGARAYAGAVV


Dataset #: 4
Motif ID: 74
Motif name: twTACATAvw
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 5
Similarity score: 0.0335447

Alignment:
DBTATGTAHH
---ATKTM--

Original motif     Consensus sequence: HHTACATAVD Reverse complement motif     Consensus sequence: DBTATGTAHH


Dataset #: 4
Motif ID: 83
Motif name: wwTAAAwAww
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 5
Similarity score: 0.0514182

Alignment:
HHTWTTTADD
---ATKTM--

Original motif     Consensus sequence: DDTAAAWAHH Reverse complement motif     Consensus sequence: HHTWTTTADD


Dataset #: 4
Motif ID: 76
Motif name: wwWAAAAAwa
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 5
Similarity score: 0.0597589

Alignment:
WWAAAAAAWH
----RARAT-

Original motif     Consensus sequence: WWAAAAAAWH Reverse complement motif     Consensus sequence: HWTTTTTTWW


Dataset #: 4
Motif ID: 101
Motif name: AAAAAAAAAAA
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 10
Number of overlap: 5
Similarity score: 0.0609742

Alignment:
DVTGCATGCATGBH
---------ATKTM

Original motif     Consensus sequence: HVCATGCATGCABD Reverse complement motif     Consensus sequence: DVTGCATGCATGBH


Dataset #: 4
Motif ID: 100
Motif name: wrTGTATACAyw
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 5
Similarity score: 0.0620607

Alignment:
DHTGTATACADH
-ATKTM------

Original motif     Consensus sequence: HDTGTATACAHD Reverse complement motif     Consensus sequence: DHTGTATACADH


Dataset #: 1 Motif ID: 4 Motif name: Motif 4

Original motif     Consensus sequence: CYBCCTCC Reverse complement motif     Consensus sequence: GGAGGVMG

Best Matches for Top Significant Motif ID 4 (Highest to Lowest)

Dataset #: 3
Motif ID: 48
Motif name: EWSR1-FLI1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 6
Number of overlap: 8
Similarity score: 0.022644

Alignment:
GGAAGGAAGGAAGGAAGG
-----GGAGGVMG-----

Original motif     Consensus sequence: GGAAGGAAGGAAGGAAGG Reverse complement motif     Consensus sequence: CCTTCCTTCCTTCCTTCC


Dataset #: 3
Motif ID: 32
Motif name: SP1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0247246

Alignment:
CCCCKCCCCC
--CYBCCTCC

Original motif     Consensus sequence: CCCCKCCCCC Reverse complement motif     Consensus sequence: GGGGGYGGGG


Dataset #: 4
Motif ID: 93
Motif name: rrAGGGGGArr
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0300296

Alignment:
VVTCCCCCTVV
---CYBCCTCC

Original motif     Consensus sequence: VVAGGGGGAVV Reverse complement motif     Consensus sequence: VVTCCCCCTVV


Dataset #: 4
Motif ID: 91
Motif name: ssCGCCsCCrCCCss
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0335629

Alignment:
SSCGCCSCCGCCCSS
----CYBCCTCC---

Original motif     Consensus sequence: SSCGCCSCCGCCCSS Reverse complement motif     Consensus sequence: SSGGGCGGSGGCGSS


Dataset #: 3
Motif ID: 52
Motif name: Klf4
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0354458

Alignment:
GCCYCMCCCD
-CYBCCTCC-

Original motif     Consensus sequence: DGGGYGKGGC Reverse complement motif     Consensus sequence: GCCYCMCCCD


Dataset #: 4
Motif ID: 88
Motif name: ssCrCYyYCGss
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.045829

Alignment:
BBCRCCYCCGBB
----CYBCCTCC

Original motif     Consensus sequence: BBCRCCYCCGBB Reverse complement motif     Consensus sequence: BBCGGKGGMGBB


Dataset #: 4
Motif ID: 73
Motif name: ssCGsCTCss
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0472644

Alignment:
VVCGSCTCBB
-CYBCCTCC-

Original motif     Consensus sequence: VVCGSCTCBB Reverse complement motif     Consensus sequence: BBGAGSCGVV


Dataset #: 3
Motif ID: 57
Motif name: MZF1_5-13
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.049303

Alignment:
BTHCCCCTYB
--CYBCCTCC

Original motif     Consensus sequence: BKAGGGGDAD Reverse complement motif     Consensus sequence: BTHCCCCTYB


Dataset #: 3
Motif ID: 34
Motif name: RREB1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.0528666

Alignment:
BGRRRGRGGRTGRTTYGGGG
----GGAGGVMG--------

Original motif     Consensus sequence: CCCCMAAMCAMCCMCMMMCV Reverse complement motif     Consensus sequence: BGRRRGRGGRTGRTTYGGGG


Dataset #: 4
Motif ID: 89
Motif name: ccCCmCACCcc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0549805

Alignment:
HBCCMCACCHH
-CYBCCTCC--

Original motif     Consensus sequence: HBCCMCACCHH Reverse complement motif     Consensus sequence: DDGGTGRGGBD


Dataset #: 1 Motif ID: 2 Motif name: Motif 2

Original motif     Consensus sequence: CACACACA Reverse complement motif     Consensus sequence: TGTGTGTG

Best Matches for Top Significant Motif ID 2 (Highest to Lowest)

Dataset #: 4
Motif ID: 79
Motif name: CACACACACACA
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.00486551

Alignment:
CACACACACACA
--CACACACA--

Original motif     Consensus sequence: CACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTG


Dataset #: 4
Motif ID: 95
Motif name: CACACACACACA
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.0100991

Alignment:
TGTGTGTGTGTG
----TGTGTGTG

Original motif     Consensus sequence: CACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTG


Dataset #: 2
Motif ID: 27
Motif name: Motif 27
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0101254

Alignment:
TGTGTGTGTGTKTG
--TGTGTGTG----

Original motif     Consensus sequence: CAYACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTKTG


Dataset #: 2
Motif ID: 25
Motif name: Motif 25
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 7
Number of overlap: 8
Similarity score: 0.0226631

Alignment:
TGTGTGKVTGTGTG
TGTGTGTG------

Original motif     Consensus sequence: CACACAVRCACACA Reverse complement motif     Consensus sequence: TGTGTGKVTGTGTG


Dataset #: 4
Motif ID: 97
Motif name: ryayAyAyrtGTRTrTry
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 10
Number of overlap: 8
Similarity score: 0.0393219

Alignment:
DHAYAYAYRTGTGTRTDH
---------TGTGTGTG-

Original motif     Consensus sequence: DHAYAYAYRTGTGTRTDH Reverse complement motif     Consensus sequence: HDAMACACAKKTKTKTHD


Dataset #: 4
Motif ID: 75
Motif name: yayAyAyACATrya
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 8
Similarity score: 0.0468047

Alignment:
HACAYAYACATRHD
--CACACACA----

Original motif     Consensus sequence: HACAYAYACATRHD Reverse complement motif     Consensus sequence: DHKATGTKTKTGTD


Dataset #: 4
Motif ID: 86
Motif name: aaCAAAAACaa
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0633924

Alignment:
HHCAAAAACAH
--CACACACA-

Original motif     Consensus sequence: HHCAAAAACAH Reverse complement motif     Consensus sequence: HTGTTTTTGHH


Dataset #: 4
Motif ID: 74
Motif name: twTACATAvw
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0691437

Alignment:
DBTATGTAHH
TGTGTGTG--

Original motif     Consensus sequence: HHTACATAVD Reverse complement motif     Consensus sequence: DBTATGTAHH


Dataset #: 3
Motif ID: 34
Motif name: RREB1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 7
Number of overlap: 8
Similarity score: 0.0752394

Alignment:
CCCCMAAMCAMCCMCMMMCV
------CACACACA------

Original motif     Consensus sequence: CCCCMAAMCAMCCMCMMMCV Reverse complement motif     Consensus sequence: BGRRRGRGGRTGRTTYGGGG


Dataset #: 4
Motif ID: 101
Motif name: AAAAAAAAAAA
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0764586

Alignment:
DVTGCATGCATGBH
------TGTGTGTG

Original motif     Consensus sequence: HVCATGCATGCABD Reverse complement motif     Consensus sequence: DVTGCATGCATGBH


Dataset #: 2 Motif ID: 20 Motif name: Motif 20

Original motif     Consensus sequence: CTCTGY Reverse complement motif     Consensus sequence: KCAGAG

Best Matches for Top Significant Motif ID 20 (Highest to Lowest)

Dataset #: 4
Motif ID: 77
Motif name: ssGCTswGCCms
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 6
Similarity score: 0.0323407

Alignment:
VBGCTSAGCCHB
---CTCTGY---

Original motif     Consensus sequence: VBGCTSAGCCHB Reverse complement motif     Consensus sequence: BDGGCTSAGCBV


Dataset #: 1
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 6
Similarity score: 0.0352938

Alignment:
ASASAGAA
--KCAGAG

Original motif     Consensus sequence: ASASAGAA Reverse complement motif     Consensus sequence: TTCTSTST


Dataset #: 3
Motif ID: 59
Motif name: NR1H2RXRA
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 6
Number of overlap: 6
Similarity score: 0.0398495

Alignment:
AAAGGTCAAAGGTCAAC
-----KCAGAG------

Original motif     Consensus sequence: AAAGGTCAAAGGTCAAC Reverse complement motif     Consensus sequence: GTTGACCTTTGACCTTT


Dataset #: 3
Motif ID: 36
Motif name: PPARGRXRA
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 6
Number of overlap: 6
Similarity score: 0.0415907

Alignment:
BTRGGDCARAGGKCA
-----KCAGAG----

Original motif     Consensus sequence: BTRGGDCARAGGKCA Reverse complement motif     Consensus sequence: TGRCCTKTGHCCKAB


Dataset #: 1
Motif ID: 11
Motif name: Motif 11
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.0430865

Alignment:
CCGCCGCC
-CTCTGY-

Original motif     Consensus sequence: CCGCCGCC Reverse complement motif     Consensus sequence: GGCGGCGG


Dataset #: 4
Motif ID: 72
Motif name: ssCKCwsCGss
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 6
Similarity score: 0.0439226

Alignment:
BVCGCWSCGBV
----CTCTGY-

Original motif     Consensus sequence: BVCGCWSCGBV Reverse complement motif     Consensus sequence: VBCGSWGCGVB


Dataset #: 3
Motif ID: 38
Motif name: NR2F1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 6
Similarity score: 0.0462597

Alignment:
AKGYYCAAAGRTCA
----KCAGAG----

Original motif     Consensus sequence: TGAMCTTTGMMCYT Reverse complement motif     Consensus sequence: AKGYYCAAAGRTCA


Dataset #: 4
Motif ID: 92
Motif name: tyTCTkTkTCyy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.0467436

Alignment:
BBTCTKTKTCHB
-CTCTGY-----

Original motif     Consensus sequence: BBTCTKTKTCHB Reverse complement motif     Consensus sequence: VHGARAYAGAVV


Dataset #: 3
Motif ID: 50
Motif name: HNF4A
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 6
Similarity score: 0.0481824

Alignment:
RGGBCAAAGKYCA
---KCAGAG----

Original motif     Consensus sequence: RGGBCAAAGKYCA Reverse complement motif     Consensus sequence: TGMYCTTTGBCCK


Dataset #: 3
Motif ID: 53
Motif name: MIZF
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.049747

Alignment:
BAACGTCCGC
----CTCTGY

Original motif     Consensus sequence: BAACGTCCGC Reverse complement motif     Consensus sequence: GCGGACGTTV


Dataset #: 3 Motif ID: 42 Motif name: ArntAhr

Original motif     Consensus sequence: YGCGTG Reverse complement motif     Consensus sequence: CACGCM

Best Matches for Top Significant Motif ID 42 (Highest to Lowest)

Dataset #: 2
Motif ID: 27
Motif name: Motif 27
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 7
Number of overlap: 6
Similarity score: 0.0388571

Alignment:
TGTGTGTGTGTKTG
------YGCGTG--

Original motif     Consensus sequence: CAYACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTKTG


Dataset #: 4
Motif ID: 79
Motif name: CACACACACACA
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 7
Number of overlap: 6
Similarity score: 0.0420782

Alignment:
TGTGTGTGTGTG
YGCGTG------

Original motif     Consensus sequence: CACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTG


Dataset #: 2
Motif ID: 25
Motif name: Motif 25
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 9
Number of overlap: 6
Similarity score: 0.0430749

Alignment:
CACACAVRCACACA
--------CACGCM

Original motif     Consensus sequence: CACACAVRCACACA Reverse complement motif     Consensus sequence: TGTGTGKVTGTGTG


Dataset #: 4
Motif ID: 101
Motif name: AAAAAAAAAAA
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 7
Number of overlap: 6
Similarity score: 0.043218

Alignment:
HVCATGCATGCABD
--CACGCM------

Original motif     Consensus sequence: HVCATGCATGCABD Reverse complement motif     Consensus sequence: DVTGCATGCATGBH


Dataset #: 4
Motif ID: 95
Motif name: CACACACACACA
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 6
Similarity score: 0.0440329

Alignment:
TGTGTGTGTGTG
----YGCGTG--

Original motif     Consensus sequence: CACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTG


Dataset #: 4
Motif ID: 96
Motif name: yrTGTGCACAyr
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 7
Number of overlap: 6
Similarity score: 0.0477579

Alignment:
BVTGTGCACABV
YGCGTG------

Original motif     Consensus sequence: BVTGTGCACABV Reverse complement motif     Consensus sequence: BBTGTGCACAVV


Dataset #: 4
Motif ID: 89
Motif name: ccCCmCACCcc
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.0479115

Alignment:
HBCCMCACCHH
-----CACGCM

Original motif     Consensus sequence: HBCCMCACCHH Reverse complement motif     Consensus sequence: DDGGTGRGGBD


Dataset #: 4
Motif ID: 65
Motif name: ssCGrGCGss
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.0487655

Alignment:
VBCGCMCGSV
----CACGCM

Original motif     Consensus sequence: VSCGRGCGBV Reverse complement motif     Consensus sequence: VBCGCMCGSV


Dataset #: 1
Motif ID: 2
Motif name: Motif 2
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0.0505006

Alignment:
CACACACA
CACGCM--

Original motif     Consensus sequence: CACACACA Reverse complement motif     Consensus sequence: TGTGTGTG


Dataset #: 4
Motif ID: 67
Motif name: ssGMsGRGCGss
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 7
Number of overlap: 6
Similarity score: 0.0538134

Alignment:
BBCGCCCSGCVV
CACGCM------

Original motif     Consensus sequence: VVGCSGGGCGBB Reverse complement motif     Consensus sequence: BBCGCCCSGCVV


Dataset #: 1 Motif ID: 13 Motif name: Motif 13

Original motif     Consensus sequence: GAGRCAGR Reverse complement motif     Consensus sequence: MCTGKCTC

Best Matches for Top Significant Motif ID 13 (Highest to Lowest)

Dataset #: 4
Motif ID: 92
Motif name: tyTCTkTkTCyy
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0131318

Alignment:
VHGARAYAGAVV
--GAGRCAGR--

Original motif     Consensus sequence: BBTCTKTKTCHB Reverse complement motif     Consensus sequence: VHGARAYAGAVV


Dataset #: 4
Motif ID: 73
Motif name: ssCGsCTCss
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0334555

Alignment:
BBGAGSCGVV
--GAGRCAGR

Original motif     Consensus sequence: VVCGSCTCBB Reverse complement motif     Consensus sequence: BBGAGSCGVV


Dataset #: 3
Motif ID: 48
Motif name: EWSR1-FLI1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 7
Number of overlap: 8
Similarity score: 0.0397014

Alignment:
GGAAGGAAGGAAGGAAGG
------GAGRCAGR----

Original motif     Consensus sequence: GGAAGGAAGGAAGGAAGG Reverse complement motif     Consensus sequence: CCTTCCTTCCTTCCTTCC


Dataset #: 4
Motif ID: 99
Motif name: sgCTGGCCAGcs
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0475948

Alignment:
VVCTGGCCAGBB
-MCTGKCTC---

Original motif     Consensus sequence: BBCTGGCCAGVV Reverse complement motif     Consensus sequence: VVCTGGCCAGBB


Dataset #: 3
Motif ID: 35
Motif name: REST
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.049302

Alignment:
GGYGCTGTCCATGGTGCTGAA
---MCTGKCTC----------

Original motif     Consensus sequence: TTCAGCACCATGGACAGCKCC Reverse complement motif     Consensus sequence: GGYGCTGTCCATGGTGCTGAA


Dataset #: 2
Motif ID: 23
Motif name: Motif 23
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0551203

Alignment:
GGGGMGGG
GAGRCAGR

Original motif     Consensus sequence: CCCRCCCC Reverse complement motif     Consensus sequence: GGGGMGGG


Dataset #: 4
Motif ID: 80
Motif name: ssCwGGCCwGCss
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.055328

Alignment:
BBCWGGCCAGCBB
-MCTGKCTC----

Original motif     Consensus sequence: BBCWGGCCAGCBB Reverse complement motif     Consensus sequence: BBGCTGGCCWGBB


Dataset #: 4
Motif ID: 93
Motif name: rrAGGGGGArr
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0555608

Alignment:
VVAGGGGGAVV
---GAGRCAGR

Original motif     Consensus sequence: VVAGGGGGAVV Reverse complement motif     Consensus sequence: VVTCCCCCTVV


Dataset #: 3
Motif ID: 45
Motif name: ESR1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 13
Number of overlap: 8
Similarity score: 0.055859

Alignment:
VDBHMAGGTCACCCTGACCY
------------MCTGKCTC

Original motif     Consensus sequence: VDBHMAGGTCACCCTGACCY Reverse complement motif     Consensus sequence: MGGTCAGGGTGACCTRDBHV


Dataset #: 3
Motif ID: 36
Motif name: PPARGRXRA
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 5
Number of overlap: 8
Similarity score: 0.0596402

Alignment:
TGRCCTKTGHCCKAB
---MCTGKCTC----

Original motif     Consensus sequence: BTRGGDCARAGGKCA Reverse complement motif     Consensus sequence: TGRCCTKTGHCCKAB


Dataset #: 1 Motif ID: 14 Motif name: Motif 14

Original motif     Consensus sequence: GCRCACRC Reverse complement motif     Consensus sequence: GKGTGKGC

Best Matches for Top Significant Motif ID 14 (Highest to Lowest)

Dataset #: 2
Motif ID: 27
Motif name: Motif 27
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0307099

Alignment:
CAYACACACACACA
---GCRCACRC---

Original motif     Consensus sequence: CAYACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTKTG


Dataset #: 4
Motif ID: 79
Motif name: CACACACACACA
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0357914

Alignment:
CACACACACACA
-GCRCACRC---

Original motif     Consensus sequence: CACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTG


Dataset #: 4
Motif ID: 95
Motif name: CACACACACACA
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0366948

Alignment:
CACACACACACA
-GCRCACRC---

Original motif     Consensus sequence: CACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTG


Dataset #: 3
Motif ID: 52
Motif name: Klf4
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.03983

Alignment:
DGGGYGKGGC
-GKGTGKGC-

Original motif     Consensus sequence: DGGGYGKGGC Reverse complement motif     Consensus sequence: GCCYCMCCCD


Dataset #: 2
Motif ID: 25
Motif name: Motif 25
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 6
Number of overlap: 8
Similarity score: 0.0418776

Alignment:
CACACAVRCACACA
-----GCRCACRC-

Original motif     Consensus sequence: CACACAVRCACACA Reverse complement motif     Consensus sequence: TGTGTGKVTGTGTG


Dataset #: 3
Motif ID: 44
Motif name: Egr1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0429433

Alignment:
HGCGTGGGCGK
-GKGTGKGC--

Original motif     Consensus sequence: HGCGTGGGCGK Reverse complement motif     Consensus sequence: YCGCCCACGCH


Dataset #: 4
Motif ID: 89
Motif name: ccCCmCACCcc
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0505252

Alignment:
DDGGTGRGGBD
-GKGTGKGC--

Original motif     Consensus sequence: HBCCMCACCHH Reverse complement motif     Consensus sequence: DDGGTGRGGBD


Dataset #: 4
Motif ID: 96
Motif name: yrTGTGCACAyr
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0537384

Alignment:
BVTGTGCACABV
---GCRCACRC-

Original motif     Consensus sequence: BVTGTGCACABV Reverse complement motif     Consensus sequence: BBTGTGCACAVV


Dataset #: 4
Motif ID: 65
Motif name: ssCGrGCGss
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.067702

Alignment:
VBCGCMCGSV
-GCRCACRC-

Original motif     Consensus sequence: VSCGRGCGBV Reverse complement motif     Consensus sequence: VBCGCMCGSV


Dataset #: 4
Motif ID: 91
Motif name: ssCGCCsCCrCCCss
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0685867

Alignment:
SSCGCCSCCGCCCSS
---GCRCACRC----

Original motif     Consensus sequence: SSCGCCSCCGCCCSS Reverse complement motif     Consensus sequence: SSGGGCGGSGGCGSS



Significant Motifs - Global and Local Matching (Highest to Lowest)

Dataset #: 3 Motif ID: 30 Motif name: ZEB1

Original motif     Consensus sequence: CACCTD Reverse complement motif     Consensus sequence: HAGGTG

Best Matches for Significant Motif ID 30 (Highest to Lowest)

Dataset #: 3
Motif ID: 62
Motif name: RORA_1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 6
Similarity score: 0.0141289

Alignment:
TGACCTDVWT
-CACCTD---

Original motif     Consensus sequence: AWVDAGGTCA Reverse complement motif     Consensus sequence: TGACCTDVWT


Dataset #: 3
Motif ID: 35
Motif name: REST
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 6
Number of overlap: 6
Similarity score: 0.0143133

Alignment:
GGYGCTGTCCATGGTGCTGAA
----------HAGGTG-----

Original motif     Consensus sequence: TTCAGCACCATGGACAGCKCC Reverse complement motif     Consensus sequence: GGYGCTGTCCATGGTGCTGAA


Dataset #: 4
Motif ID: 89
Motif name: ccCCmCACCcc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.0148347

Alignment:
HBCCMCACCHH
-----CACCTD

Original motif     Consensus sequence: HBCCMCACCHH Reverse complement motif     Consensus sequence: DDGGTGRGGBD


Dataset #: 4
Motif ID: 93
Motif name: rrAGGGGGArr
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 6
Similarity score: 0.0194512

Alignment:
VVAGGGGGAVV
-HAGGTG----

Original motif     Consensus sequence: VVAGGGGGAVV Reverse complement motif     Consensus sequence: VVTCCCCCTVV


Dataset #: 3
Motif ID: 41
Motif name: Arnt
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.0207244

Alignment:
CACGTG
CACCTD

Original motif     Consensus sequence: CACGTG Reverse complement motif     Consensus sequence: CACGTG


Dataset #: 3
Motif ID: 47
Motif name: Esrrb
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0.0207244

Alignment:
CACGTG
HAGGTG

Original motif     Consensus sequence: CACGTG Reverse complement motif     Consensus sequence: CACGTG


Dataset #: 3
Motif ID: 59
Motif name: NR1H2RXRA
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.0232753

Alignment:
GTTGACCTTTGACCTTT
----------CACCTD-

Original motif     Consensus sequence: AAAGGTCAAAGGTCAAC Reverse complement motif     Consensus sequence: GTTGACCTTTGACCTTT


Dataset #: 3
Motif ID: 49
Motif name: HIF1AARNT
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.0237889

Alignment:
VBACGTGV
-HAGGTG-

Original motif     Consensus sequence: VBACGTGV Reverse complement motif     Consensus sequence: VCACGTBV


Dataset #: 3
Motif ID: 51
Motif name: INSM1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 6
Similarity score: 0.0262123

Alignment:
TGYCAGGGGGCR
---HAGGTG---

Original motif     Consensus sequence: TGYCAGGGGGCR Reverse complement motif     Consensus sequence: MGCCCCCTGMCA


Dataset #: 3
Motif ID: 36
Motif name: PPARGRXRA
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 9
Number of overlap: 6
Similarity score: 0.0264837

Alignment:
TGRCCTKTGHCCKAB
-CACCTD--------

Original motif     Consensus sequence: BTRGGDCARAGGKCA Reverse complement motif     Consensus sequence: TGRCCTKTGHCCKAB


Dataset #: 4 Motif ID: 73 Motif name: ssCGsCTCss

Original motif     Consensus sequence: VVCGSCTCBB Reverse complement motif     Consensus sequence: BBGAGSCGVV

Best Matches for Significant Motif ID 73 (Highest to Lowest)

Dataset #: 4
Motif ID: 90
Motif name: ssCGsCwsCss
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0

Alignment:
BBGSWGSCGBB
-BBGAGSCGVV

Original motif     Consensus sequence: BBCGSCWSCBB Reverse complement motif     Consensus sequence: BBGSWGSCGBB


Dataset #: 4
Motif ID: 78
Motif name: sssCGssGCsss
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.0108856

Alignment:
SSSCGSSGCSSS
-VVCGSCTCBB-

Original motif     Consensus sequence: SSSCGSSGCSSS Reverse complement motif     Consensus sequence: SSSGCSSCGSSS


Dataset #: 4
Motif ID: 94
Motif name: ssCGCksCGss
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.0139257

Alignment:
VVCGCKSCGBB
-BBGAGSCGVV

Original motif     Consensus sequence: VVCGCKSCGBB Reverse complement motif     Consensus sequence: BBCGSRGCGVV


Dataset #: 4
Motif ID: 87
Motif name: ssCGGsYCGss
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.0162661

Alignment:
BSCGGSCCGSV
VVCGSCTCBB-

Original motif     Consensus sequence: BSCGGSCCGSV Reverse complement motif     Consensus sequence: VSCGGSCCGSB


Dataset #: 4
Motif ID: 91
Motif name: ssCGCCsCCrCCCss
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 6
Number of overlap: 10
Similarity score: 0.0236639

Alignment:
SSCGCCSCCGCCCSS
VVCGSCTCBB-----

Original motif     Consensus sequence: SSCGCCSCCGCCCSS Reverse complement motif     Consensus sequence: SSGGGCGGSGGCGSS


Dataset #: 4
Motif ID: 66
Motif name: ssCGssCGss
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0241432

Alignment:
BSCGSSCGSV
VVCGSCTCBB

Original motif     Consensus sequence: BSCGSSCGSV Reverse complement motif     Consensus sequence: VSCGSSCGSB


Dataset #: 4
Motif ID: 65
Motif name: ssCGrGCGss
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0252915

Alignment:
VBCGCMCGSV
VVCGSCTCBB

Original motif     Consensus sequence: VSCGRGCGBV Reverse complement motif     Consensus sequence: VBCGCMCGSV


Dataset #: 4
Motif ID: 67
Motif name: ssGMsGRGCGss
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 10
Similarity score: 0.0315402

Alignment:
BBCGCCCSGCVV
--VVCGSCTCBB

Original motif     Consensus sequence: VVGCSGGGCGBB Reverse complement motif     Consensus sequence: BBCGCCCSGCVV


Dataset #: 4
Motif ID: 72
Motif name: ssCKCwsCGss
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.0340702

Alignment:
VBCGSWGCGVB
-VVCGSCTCBB

Original motif     Consensus sequence: BVCGCWSCGBV Reverse complement motif     Consensus sequence: VBCGSWGCGVB


Dataset #: 4
Motif ID: 88
Motif name: ssCrCYyYCGss
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0353522

Alignment:
BBCRCCYCCGBB
VVCGSCTCBB--

Original motif     Consensus sequence: BBCRCCYCCGBB Reverse complement motif     Consensus sequence: BBCGGKGGMGBB


Dataset #: 4 Motif ID: 68 Motif name: dwCTTTTCwy

Original motif     Consensus sequence: DHCTTTTCHH Reverse complement motif     Consensus sequence: DHGAAAAGHD

Best Matches for Significant Motif ID 68 (Highest to Lowest)

Dataset #: 4
Motif ID: 71
Motif name: wyATTTTAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.00508721

Alignment:
DDTAAAATHD
DHGAAAAGHD

Original motif     Consensus sequence: DHATTTTADD Reverse complement motif     Consensus sequence: DDTAAAATHD


Dataset #: 4
Motif ID: 81
Motif name: wwTAAwAAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0148156

Alignment:
DDTAAWAAHH
DHGAAAAGHD

Original motif     Consensus sequence: DDTAAWAAHH Reverse complement motif     Consensus sequence: HHTTWTTADD


Dataset #: 4
Motif ID: 76
Motif name: wwWAAAAAwa
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0152278

Alignment:
WWAAAAAAWH
DHGAAAAGHD

Original motif     Consensus sequence: WWAAAAAAWH Reverse complement motif     Consensus sequence: HWTTTTTTWW


Dataset #: 4
Motif ID: 83
Motif name: wwTAAAwAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0196583

Alignment:
DDTAAAWAHH
DHGAAAAGHD

Original motif     Consensus sequence: DDTAAAWAHH Reverse complement motif     Consensus sequence: HHTWTTTADD


Dataset #: 4
Motif ID: 85
Motif name: wtATTTTTAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.0226988

Alignment:
DDTAAAAATHD
DHGAAAAGHD-

Original motif     Consensus sequence: DHATTTTTADD Reverse complement motif     Consensus sequence: DDTAAAAATHD


Dataset #: 3
Motif ID: 35
Motif name: REST
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 10
Number of overlap: 10
Similarity score: 0.0242678

Alignment:
GGYGCTGTCCATGGTGCTGAA
---------DHCTTTTCHH--

Original motif     Consensus sequence: TTCAGCACCATGGACAGCKCC Reverse complement motif     Consensus sequence: GGYGCTGTCCATGGTGCTGAA


Dataset #: 4
Motif ID: 86
Motif name: aaCAAAAACaa
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.0309896

Alignment:
HTGTTTTTGHH
-DHCTTTTCHH

Original motif     Consensus sequence: HHCAAAAACAH Reverse complement motif     Consensus sequence: HTGTTTTTGHH


Dataset #: 4
Motif ID: 69
Motif name: aaACAAAACaa
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0311578

Alignment:
TTGTTTTGTTT
DHCTTTTCHH-

Original motif     Consensus sequence: AAACAAAACAA Reverse complement motif     Consensus sequence: TTGTTTTGTTT


Dataset #: 3
Motif ID: 50
Motif name: HNF4A
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.03324

Alignment:
RGGBCAAAGKYCA
--DHGAAAAGHD-

Original motif     Consensus sequence: RGGBCAAAGKYCA Reverse complement motif     Consensus sequence: TGMYCTTTGBCCK


Dataset #: 4
Motif ID: 92
Motif name: tyTCTkTkTCyy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.0365489

Alignment:
BBTCTKTKTCHB
-DHCTTTTCHH-

Original motif     Consensus sequence: BBTCTKTKTCHB Reverse complement motif     Consensus sequence: VHGARAYAGAVV


Dataset #: 2 Motif ID: 18 Motif name: Motif 18

Original motif     Consensus sequence: AMACA Reverse complement motif     Consensus sequence: TGTRT

Best Matches for Significant Motif ID 18 (Highest to Lowest)

Dataset #: 1
Motif ID: 2
Motif name: Motif 2
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 5
Similarity score: 0

Alignment:
CACACACA
---AMACA

Original motif     Consensus sequence: CACACACA Reverse complement motif     Consensus sequence: TGTGTGTG


Dataset #: 4
Motif ID: 79
Motif name: CACACACACACA
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 5
Similarity score: 0.0148279

Alignment:
CACACACACACA
-----AMACA--

Original motif     Consensus sequence: CACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTG


Dataset #: 2
Motif ID: 27
Motif name: Motif 27
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 5
Similarity score: 0.0192752

Alignment:
CAYACACACACACA
-----AMACA----

Original motif     Consensus sequence: CAYACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTKTG


Dataset #: 4
Motif ID: 95
Motif name: CACACACACACA
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 5
Similarity score: 0.0228414

Alignment:
TGTGTGTGTGTG
----TGTRT---

Original motif     Consensus sequence: CACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTG


Dataset #: 2
Motif ID: 25
Motif name: Motif 25
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 10
Number of overlap: 5
Similarity score: 0.0233505

Alignment:
TGTGTGKVTGTGTG
TGTRT---------

Original motif     Consensus sequence: CACACAVRCACACA Reverse complement motif     Consensus sequence: TGTGTGKVTGTGTG


Dataset #: 4
Motif ID: 69
Motif name: aaACAAAACaa
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 5
Similarity score: 0.0274014

Alignment:
AAACAAAACAA
-----AMACA-

Original motif     Consensus sequence: AAACAAAACAA Reverse complement motif     Consensus sequence: TTGTTTTGTTT


Dataset #: 4
Motif ID: 86
Motif name: aaCAAAAACaa
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 5
Similarity score: 0.0291354

Alignment:
HHCAAAAACAH
-----AMACA-

Original motif     Consensus sequence: HHCAAAAACAH Reverse complement motif     Consensus sequence: HTGTTTTTGHH


Dataset #: 4
Motif ID: 97
Motif name: ryayAyAyrtGTRTrTry
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 10
Number of overlap: 5
Similarity score: 0.0293401

Alignment:
HDAMACACAKKTKTKTHD
----AMACA---------

Original motif     Consensus sequence: DHAYAYAYRTGTGTRTDH Reverse complement motif     Consensus sequence: HDAMACACAKKTKTKTHD


Dataset #: 4
Motif ID: 100
Motif name: wrTGTATACAyw
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 5
Similarity score: 0.0302831

Alignment:
HDTGTATACAHD
--TGTRT-----

Original motif     Consensus sequence: HDTGTATACAHD Reverse complement motif     Consensus sequence: DHTGTATACADH


Dataset #: 1
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 5
Similarity score: 0.0378142

Alignment:
AAAASAAA
-AMACA--

Original motif     Consensus sequence: AAAASAAA Reverse complement motif     Consensus sequence: TTTSTTTT


Dataset #: 4 Motif ID: 71 Motif name: wyATTTTAww

Original motif     Consensus sequence: DHATTTTADD Reverse complement motif     Consensus sequence: DDTAAAATHD

Best Matches for Significant Motif ID 71 (Highest to Lowest)

Dataset #: 4
Motif ID: 85
Motif name: wtATTTTTAww
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0

Alignment:
DHATTTTTADD
DHATTTTADD-

Original motif     Consensus sequence: DHATTTTTADD Reverse complement motif     Consensus sequence: DDTAAAAATHD


Dataset #: 4
Motif ID: 81
Motif name: wwTAAwAAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.00285443

Alignment:
DDTAAWAAHH
DDTAAAATHD

Original motif     Consensus sequence: DDTAAWAAHH Reverse complement motif     Consensus sequence: HHTTWTTADD


Dataset #: 4
Motif ID: 83
Motif name: wwTAAAwAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.00437246

Alignment:
DDTAAAWAHH
DDTAAAATHD

Original motif     Consensus sequence: DDTAAAWAHH Reverse complement motif     Consensus sequence: HHTWTTTADD


Dataset #: 4
Motif ID: 76
Motif name: wwWAAAAAwa
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0153432

Alignment:
WWAAAAAAWH
DDTAAAATHD

Original motif     Consensus sequence: WWAAAAAAWH Reverse complement motif     Consensus sequence: HWTTTTTTWW


Dataset #: 4
Motif ID: 68
Motif name: dwCTTTTCwy
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0177129

Alignment:
DHGAAAAGHD
DDTAAAATHD

Original motif     Consensus sequence: DHCTTTTCHH Reverse complement motif     Consensus sequence: DHGAAAAGHD


Dataset #: 4
Motif ID: 104
Motif name: wtTTWwAAAaw
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.0302024

Alignment:
DDTTTWAAAHH
DHATTTTADD-

Original motif     Consensus sequence: HHTTTWAAADD Reverse complement motif     Consensus sequence: DDTTTWAAAHH


Dataset #: 4
Motif ID: 74
Motif name: twTACATAvw
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0367109

Alignment:
DBTATGTAHH
DHATTTTADD

Original motif     Consensus sequence: HHTACATAVD Reverse complement motif     Consensus sequence: DBTATGTAHH


Dataset #: 4
Motif ID: 86
Motif name: aaCAAAAACaa
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0372694

Alignment:
HHCAAAAACAH
DDTAAAATHD-

Original motif     Consensus sequence: HHCAAAAACAH Reverse complement motif     Consensus sequence: HTGTTTTTGHH


Dataset #: 4
Motif ID: 69
Motif name: aaACAAAACaa
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.0401253

Alignment:
AAACAAAACAA
DDTAAAATHD-

Original motif     Consensus sequence: AAACAAAACAA Reverse complement motif     Consensus sequence: TTGTTTTGTTT


Dataset #: 4
Motif ID: 102
Motif name: AAAAAAAAAAA
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0513368

Alignment:
TTTTTTTTTTT
-DHATTTTADD

Original motif     Consensus sequence: AAAAAAAAAAA Reverse complement motif     Consensus sequence: TTTTTTTTTTT


Dataset #: 4 Motif ID: 76 Motif name: wwWAAAAAwa

Original motif     Consensus sequence: WWAAAAAAWH Reverse complement motif     Consensus sequence: HWTTTTTTWW

Best Matches for Significant Motif ID 76 (Highest to Lowest)

Dataset #: 4
Motif ID: 85
Motif name: wtATTTTTAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.00795084

Alignment:
DHATTTTTADD
-HWTTTTTTWW

Original motif     Consensus sequence: DHATTTTTADD Reverse complement motif     Consensus sequence: DDTAAAAATHD


Dataset #: 4
Motif ID: 81
Motif name: wwTAAwAAww
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0105869

Alignment:
DDTAAWAAHH
WWAAAAAAWH

Original motif     Consensus sequence: DDTAAWAAHH Reverse complement motif     Consensus sequence: HHTTWTTADD


Dataset #: 4
Motif ID: 83
Motif name: wwTAAAwAww
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0135165

Alignment:
DDTAAAWAHH
WWAAAAAAWH

Original motif     Consensus sequence: DDTAAAWAHH Reverse complement motif     Consensus sequence: HHTWTTTADD


Dataset #: 4
Motif ID: 102
Motif name: AAAAAAAAAAA
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0137579

Alignment:
TTTTTTTTTTT
HWTTTTTTWW-

Original motif     Consensus sequence: AAAAAAAAAAA Reverse complement motif     Consensus sequence: TTTTTTTTTTT


Dataset #: 4
Motif ID: 86
Motif name: aaCAAAAACaa
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.0272712

Alignment:
HHCAAAAACAH
WWAAAAAAWH-

Original motif     Consensus sequence: HHCAAAAACAH Reverse complement motif     Consensus sequence: HTGTTTTTGHH


Dataset #: 4
Motif ID: 71
Motif name: wyATTTTAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0288034

Alignment:
DHATTTTADD
HWTTTTTTWW

Original motif     Consensus sequence: DHATTTTADD Reverse complement motif     Consensus sequence: DDTAAAATHD


Dataset #: 4
Motif ID: 69
Motif name: aaACAAAACaa
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0387825

Alignment:
AAACAAAACAA
WWAAAAAAWH-

Original motif     Consensus sequence: AAACAAAACAA Reverse complement motif     Consensus sequence: TTGTTTTGTTT


Dataset #: 4
Motif ID: 104
Motif name: wtTTWwAAAaw
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0395975

Alignment:
HHTTTWAAADD
-WWAAAAAAWH

Original motif     Consensus sequence: HHTTTWAAADD Reverse complement motif     Consensus sequence: DDTTTWAAAHH


Dataset #: 4
Motif ID: 68
Motif name: dwCTTTTCwy
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0413137

Alignment:
DHCTTTTCHH
HWTTTTTTWW

Original motif     Consensus sequence: DHCTTTTCHH Reverse complement motif     Consensus sequence: DHGAAAAGHD


Dataset #: 2
Motif ID: 26
Motif name: Motif 26
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0498611

Alignment:
AAAAAAACAAARRA
WWAAAAAAWH----

Original motif     Consensus sequence: TKKTTTGTTTTTTT Reverse complement motif     Consensus sequence: AAAAAAACAAARRA


Dataset #: 4 Motif ID: 83 Motif name: wwTAAAwAww

Original motif     Consensus sequence: DDTAAAWAHH Reverse complement motif     Consensus sequence: HHTWTTTADD

Best Matches for Significant Motif ID 83 (Highest to Lowest)

Dataset #: 4
Motif ID: 81
Motif name: wwTAAwAAww
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0

Alignment:
DDTAAWAAHH
DDTAAAWAHH

Original motif     Consensus sequence: DDTAAWAAHH Reverse complement motif     Consensus sequence: HHTTWTTADD


Dataset #: 4
Motif ID: 85
Motif name: wtATTTTTAww
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.00769202

Alignment:
DDTAAAAATHD
DDTAAAWAHH-

Original motif     Consensus sequence: DHATTTTTADD Reverse complement motif     Consensus sequence: DDTAAAAATHD


Dataset #: 4
Motif ID: 76
Motif name: wwWAAAAAwa
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0148593

Alignment:
WWAAAAAAWH
DDTAAAWAHH

Original motif     Consensus sequence: WWAAAAAAWH Reverse complement motif     Consensus sequence: HWTTTTTTWW


Dataset #: 4
Motif ID: 74
Motif name: twTACATAvw
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0155512

Alignment:
DBTATGTAHH
HHTWTTTADD

Original motif     Consensus sequence: HHTACATAVD Reverse complement motif     Consensus sequence: DBTATGTAHH


Dataset #: 4
Motif ID: 71
Motif name: wyATTTTAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0191754

Alignment:
DHATTTTADD
HHTWTTTADD

Original motif     Consensus sequence: DHATTTTADD Reverse complement motif     Consensus sequence: DDTAAAATHD


Dataset #: 4
Motif ID: 86
Motif name: aaCAAAAACaa
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0386588

Alignment:
HHCAAAAACAH
DDTAAAWAHH-

Original motif     Consensus sequence: HHCAAAAACAH Reverse complement motif     Consensus sequence: HTGTTTTTGHH


Dataset #: 4
Motif ID: 104
Motif name: wtTTWwAAAaw
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.0400542

Alignment:
HHTTTWAAADD
-DDTAAAWAHH

Original motif     Consensus sequence: HHTTTWAAADD Reverse complement motif     Consensus sequence: DDTTTWAAAHH


Dataset #: 4
Motif ID: 98
Motif name: wwTAATTAATTAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 5
Number of overlap: 10
Similarity score: 0.0425216

Alignment:
DHTAATTAATTADH
HHTWTTTADD----

Original motif     Consensus sequence: HDTAATTAATTAHD Reverse complement motif     Consensus sequence: DHTAATTAATTADH


Dataset #: 4
Motif ID: 68
Motif name: dwCTTTTCwy
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0470869

Alignment:
DHCTTTTCHH
HHTWTTTADD

Original motif     Consensus sequence: DHCTTTTCHH Reverse complement motif     Consensus sequence: DHGAAAAGHD


Dataset #: 4
Motif ID: 102
Motif name: AAAAAAAAAAA
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0497246

Alignment:
AAAAAAAAAAA
DDTAAAWAHH-

Original motif     Consensus sequence: AAAAAAAAAAA Reverse complement motif     Consensus sequence: TTTTTTTTTTT


Dataset #: 4 Motif ID: 81 Motif name: wwTAAwAAww

Original motif     Consensus sequence: DDTAAWAAHH Reverse complement motif     Consensus sequence: HHTTWTTADD

Best Matches for Significant Motif ID 81 (Highest to Lowest)

Dataset #: 4
Motif ID: 83
Motif name: wwTAAAwAww
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0

Alignment:
DDTAAAWAHH
DDTAAWAAHH

Original motif     Consensus sequence: DDTAAAWAHH Reverse complement motif     Consensus sequence: HHTWTTTADD


Dataset #: 4
Motif ID: 85
Motif name: wtATTTTTAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.00383605

Alignment:
DHATTTTTADD
-HHTTWTTADD

Original motif     Consensus sequence: DHATTTTTADD Reverse complement motif     Consensus sequence: DDTAAAAATHD


Dataset #: 4
Motif ID: 76
Motif name: wwWAAAAAwa
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0119297

Alignment:
WWAAAAAAWH
DDTAAWAAHH

Original motif     Consensus sequence: WWAAAAAAWH Reverse complement motif     Consensus sequence: HWTTTTTTWW


Dataset #: 4
Motif ID: 71
Motif name: wyATTTTAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0176574

Alignment:
DHATTTTADD
HHTTWTTADD

Original motif     Consensus sequence: DHATTTTADD Reverse complement motif     Consensus sequence: DDTAAAATHD


Dataset #: 4
Motif ID: 104
Motif name: wtTTWwAAAaw
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0376356

Alignment:
HHTTTWAAADD
-DDTAAWAAHH

Original motif     Consensus sequence: HHTTTWAAADD Reverse complement motif     Consensus sequence: DDTTTWAAAHH


Dataset #: 4
Motif ID: 86
Motif name: aaCAAAAACaa
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0380114

Alignment:
HHCAAAAACAH
DDTAAWAAHH-

Original motif     Consensus sequence: HHCAAAAACAH Reverse complement motif     Consensus sequence: HTGTTTTTGHH


Dataset #: 4
Motif ID: 68
Motif name: dwCTTTTCwy
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0422443

Alignment:
DHCTTTTCHH
HHTTWTTADD

Original motif     Consensus sequence: DHCTTTTCHH Reverse complement motif     Consensus sequence: DHGAAAAGHD


Dataset #: 4
Motif ID: 74
Motif name: twTACATAvw
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0437545

Alignment:
DBTATGTAHH
HHTTWTTADD

Original motif     Consensus sequence: HHTACATAVD Reverse complement motif     Consensus sequence: DBTATGTAHH


Dataset #: 4
Motif ID: 98
Motif name: wwTAATTAATTAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 5
Number of overlap: 10
Similarity score: 0.0451418

Alignment:
DHTAATTAATTADH
HHTTWTTADD----

Original motif     Consensus sequence: HDTAATTAATTAHD Reverse complement motif     Consensus sequence: DHTAATTAATTADH


Dataset #: 4
Motif ID: 102
Motif name: AAAAAAAAAAA
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0493427

Alignment:
TTTTTTTTTTT
-HHTTWTTADD

Original motif     Consensus sequence: AAAAAAAAAAA Reverse complement motif     Consensus sequence: TTTTTTTTTTT


Dataset #: 4 Motif ID: 90 Motif name: ssCGsCwsCss

Original motif     Consensus sequence: BBCGSCWSCBB Reverse complement motif     Consensus sequence: BBGSWGSCGBB

Best Matches for Significant Motif ID 90 (Highest to Lowest)

Dataset #: 4
Motif ID: 88
Motif name: ssCrCYyYCGss
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.0236246

Alignment:
BBCRCCYCCGBB
BBCGSCWSCBB-

Original motif     Consensus sequence: BBCRCCYCCGBB Reverse complement motif     Consensus sequence: BBCGGKGGMGBB


Dataset #: 4
Motif ID: 89
Motif name: ccCCmCACCcc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0238413

Alignment:
HBCCMCACCHH
BBCGSCWSCBB

Original motif     Consensus sequence: HBCCMCACCHH Reverse complement motif     Consensus sequence: DDGGTGRGGBD


Dataset #: 4
Motif ID: 78
Motif name: sssCGssGCsss
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.0239515

Alignment:
SSSCGSSGCSSS
-BBCGSCWSCBB

Original motif     Consensus sequence: SSSCGSSGCSSS Reverse complement motif     Consensus sequence: SSSGCSSCGSSS


Dataset #: 4
Motif ID: 91
Motif name: ssCGCCsCCrCCCss
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0274779

Alignment:
SSGGGCGGSGGCGSS
----BBGSWGSCGBB

Original motif     Consensus sequence: SSCGCCSCCGCCCSS Reverse complement motif     Consensus sequence: SSGGGCGGSGGCGSS


Dataset #: 4
Motif ID: 82
Motif name: rmACAGCAGsr
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0336118

Alignment:
DVCTGCTGTVB
BBCGSCWSCBB

Original motif     Consensus sequence: VVACAGCAGVD Reverse complement motif     Consensus sequence: DVCTGCTGTVB


Dataset #: 4
Motif ID: 94
Motif name: ssCGCksCGss
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0337912

Alignment:
VVCGCKSCGBB
BBGSWGSCGBB

Original motif     Consensus sequence: VVCGCKSCGBB Reverse complement motif     Consensus sequence: BBCGSRGCGVV


Dataset #: 4
Motif ID: 87
Motif name: ssCGGsYCGss
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0346171

Alignment:
BSCGGSCCGSV
BBCGSCWSCBB

Original motif     Consensus sequence: BSCGGSCCGSV Reverse complement motif     Consensus sequence: VSCGGSCCGSB


Dataset #: 4
Motif ID: 80
Motif name: ssCwGGCCwGCss
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 11
Similarity score: 0.0353683

Alignment:
BBGCTGGCCWGBB
BBGSWGSCGBB--

Original motif     Consensus sequence: BBCWGGCCAGCBB Reverse complement motif     Consensus sequence: BBGCTGGCCWGBB


Dataset #: 4
Motif ID: 67
Motif name: ssGMsGRGCGss
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.0362688

Alignment:
BBCGCCCSGCVV
-BBCGSCWSCBB

Original motif     Consensus sequence: VVGCSGGGCGBB Reverse complement motif     Consensus sequence: BBCGCCCSGCVV


Dataset #: 4
Motif ID: 72
Motif name: ssCKCwsCGss
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0409983

Alignment:
VBCGSWGCGVB
BBCGSCWSCBB

Original motif     Consensus sequence: BVCGCWSCGBV Reverse complement motif     Consensus sequence: VBCGSWGCGVB


Dataset #: 4 Motif ID: 86 Motif name: aaCAAAAACaa

Original motif     Consensus sequence: HHCAAAAACAH Reverse complement motif     Consensus sequence: HTGTTTTTGHH

Best Matches for Significant Motif ID 86 (Highest to Lowest)

Dataset #: 4
Motif ID: 69
Motif name: aaACAAAACaa
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.00599723

Alignment:
TTGTTTTGTTT
HTGTTTTTGHH

Original motif     Consensus sequence: AAACAAAACAA Reverse complement motif     Consensus sequence: TTGTTTTGTTT


Dataset #: 4
Motif ID: 85
Motif name: wtATTTTTAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0144021

Alignment:
DHATTTTTADD
HTGTTTTTGHH

Original motif     Consensus sequence: DHATTTTTADD Reverse complement motif     Consensus sequence: DDTAAAAATHD


Dataset #: 4
Motif ID: 102
Motif name: AAAAAAAAAAA
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0192906

Alignment:
TTTTTTTTTTT
HTGTTTTTGHH

Original motif     Consensus sequence: AAAAAAAAAAA Reverse complement motif     Consensus sequence: TTTTTTTTTTT


Dataset #: 4
Motif ID: 75
Motif name: yayAyAyACATrya
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 11
Similarity score: 0.0258087

Alignment:
DHKATGTKTKTGTD
---HTGTTTTTGHH

Original motif     Consensus sequence: HACAYAYACATRHD Reverse complement motif     Consensus sequence: DHKATGTKTKTGTD


Dataset #: 4
Motif ID: 79
Motif name: CACACACACACA
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.0409728

Alignment:
TGTGTGTGTGTG
-HTGTTTTTGHH

Original motif     Consensus sequence: CACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTG


Dataset #: 4
Motif ID: 92
Motif name: tyTCTkTkTCyy
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.0416867

Alignment:
BBTCTKTKTCHB
-HTGTTTTTGHH

Original motif     Consensus sequence: BBTCTKTKTCHB Reverse complement motif     Consensus sequence: VHGARAYAGAVV


Dataset #: 4
Motif ID: 95
Motif name: CACACACACACA
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.0421933

Alignment:
TGTGTGTGTGTG
-HTGTTTTTGHH

Original motif     Consensus sequence: CACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTG


Dataset #: 2
Motif ID: 27
Motif name: Motif 27
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.0439692

Alignment:
TGTGTGTGTGTKTG
-HTGTTTTTGHH--

Original motif     Consensus sequence: CAYACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTKTG


Dataset #: 3
Motif ID: 34
Motif name: RREB1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 11
Similarity score: 0.0504266

Alignment:
CCCCMAAMCAMCCMCMMMCV
------HHCAAAAACAH---

Original motif     Consensus sequence: CCCCMAAMCAMCCMCMMMCV Reverse complement motif     Consensus sequence: BGRRRGRGGRTGRTTYGGGG


Dataset #: 2
Motif ID: 26
Motif name: Motif 26
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 11
Similarity score: 0.0546799

Alignment:
AAAAAAACAAARRA
HHCAAAAACAH---

Original motif     Consensus sequence: TKKTTTGTTTTTTT Reverse complement motif     Consensus sequence: AAAAAAACAAARRA



Best Matches for Each Motif (Highest to Lowest)

Dataset #: 1 Motif ID: 1 Motif name: Motif 1

Original motif     Consensus sequence: AAAAWAAA Reverse complement motif     Consensus sequence: TTTWTTTT

Best Matches for Motif ID 1 (Highest to Lowest)

Dataset #: 4
Motif ID: 102
Motif name: AAAAAAAAAAA
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0

Alignment:
AAAAAAAAAAA
--AAAAWAAA-

Original motif     Consensus sequence: AAAAAAAAAAA Reverse complement motif     Consensus sequence: TTTTTTTTTTT


Dataset #: 1
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0225461

Alignment:
AAAASAAA
AAAAWAAA

Original motif     Consensus sequence: AAAASAAA Reverse complement motif     Consensus sequence: TTTSTTTT


Dataset #: 4
Motif ID: 76
Motif name: wwWAAAAAwa
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0315844

Alignment:
HWTTTTTTWW
-TTTWTTTT-

Original motif     Consensus sequence: WWAAAAAAWH Reverse complement motif     Consensus sequence: HWTTTTTTWW


Dataset #: 2
Motif ID: 26
Motif name: Motif 26
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0405545

Alignment:
TKKTTTGTTTTTTT
---TTTWTTTT---

Original motif     Consensus sequence: TKKTTTGTTTTTTT Reverse complement motif     Consensus sequence: AAAAAAACAAARRA


Dataset #: 4
Motif ID: 81
Motif name: wwTAAwAAww
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0501043

Alignment:
DDTAAWAAHH
-AAAAWAAA-

Original motif     Consensus sequence: DDTAAWAAHH Reverse complement motif     Consensus sequence: HHTTWTTADD


Dataset #: 4
Motif ID: 86
Motif name: aaCAAAAACaa
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0508706

Alignment:
HHCAAAAACAH
---AAAAWAAA

Original motif     Consensus sequence: HHCAAAAACAH Reverse complement motif     Consensus sequence: HTGTTTTTGHH


Dataset #: 4
Motif ID: 83
Motif name: wwTAAAwAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0533374

Alignment:
HHTWTTTADD
TTTWTTTT--

Original motif     Consensus sequence: DDTAAAWAHH Reverse complement motif     Consensus sequence: HHTWTTTADD


Dataset #: 4
Motif ID: 85
Motif name: wtATTTTTAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0555652

Alignment:
DHATTTTTADD
TTTWTTTT---

Original motif     Consensus sequence: DHATTTTTADD Reverse complement motif     Consensus sequence: DDTAAAAATHD


Dataset #: 4
Motif ID: 69
Motif name: aaACAAAACaa
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0594787

Alignment:
TTGTTTTGTTT
---TTTWTTTT

Original motif     Consensus sequence: AAACAAAACAA Reverse complement motif     Consensus sequence: TTGTTTTGTTT


Dataset #: 4
Motif ID: 92
Motif name: tyTCTkTkTCyy
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0715604

Alignment:
BBTCTKTKTCHB
-TTTWTTTT---

Original motif     Consensus sequence: BBTCTKTKTCHB Reverse complement motif     Consensus sequence: VHGARAYAGAVV


Dataset #: 4
Motif ID: 75
Motif name: yayAyAyACATrya
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 7
Number of overlap: 8
Similarity score: 0.0815577

Alignment:
DHKATGTKTKTGTD
------TTTWTTTT

Original motif     Consensus sequence: HACAYAYACATRHD Reverse complement motif     Consensus sequence: DHKATGTKTKTGTD


Dataset #: 1 Motif ID: 2 Motif name: Motif 2

Original motif     Consensus sequence: CACACACA Reverse complement motif     Consensus sequence: TGTGTGTG

Best Matches for Motif ID 2 (Highest to Lowest)

Dataset #: 4
Motif ID: 79
Motif name: CACACACACACA
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.00486551

Alignment:
CACACACACACA
--CACACACA--

Original motif     Consensus sequence: CACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTG


Dataset #: 4
Motif ID: 95
Motif name: CACACACACACA
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 8
Similarity score: 0.0100991

Alignment:
CACACACACACA
CACACACA----

Original motif     Consensus sequence: CACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTG


Dataset #: 2
Motif ID: 27
Motif name: Motif 27
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0101254

Alignment:
TGTGTGTGTGTKTG
--TGTGTGTG----

Original motif     Consensus sequence: CAYACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTKTG


Dataset #: 2
Motif ID: 25
Motif name: Motif 25
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 7
Number of overlap: 8
Similarity score: 0.0226631

Alignment:
TGTGTGKVTGTGTG
TGTGTGTG------

Original motif     Consensus sequence: CACACAVRCACACA Reverse complement motif     Consensus sequence: TGTGTGKVTGTGTG


Dataset #: 4
Motif ID: 97
Motif name: ryayAyAyrtGTRTrTry
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0393219

Alignment:
DHAYAYAYRTGTGTRTDH
---------TGTGTGTG-

Original motif     Consensus sequence: DHAYAYAYRTGTGTRTDH Reverse complement motif     Consensus sequence: HDAMACACAKKTKTKTHD


Dataset #: 4
Motif ID: 75
Motif name: yayAyAyACATrya
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 8
Similarity score: 0.0468047

Alignment:
HACAYAYACATRHD
--CACACACA----

Original motif     Consensus sequence: HACAYAYACATRHD Reverse complement motif     Consensus sequence: DHKATGTKTKTGTD


Dataset #: 4
Motif ID: 86
Motif name: aaCAAAAACaa
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0633924

Alignment:
HHCAAAAACAH
--CACACACA-

Original motif     Consensus sequence: HHCAAAAACAH Reverse complement motif     Consensus sequence: HTGTTTTTGHH


Dataset #: 4
Motif ID: 74
Motif name: twTACATAvw
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0691437

Alignment:
DBTATGTAHH
TGTGTGTG--

Original motif     Consensus sequence: HHTACATAVD Reverse complement motif     Consensus sequence: DBTATGTAHH


Dataset #: 3
Motif ID: 34
Motif name: RREB1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 7
Number of overlap: 8
Similarity score: 0.0752394

Alignment:
CCCCMAAMCAMCCMCMMMCV
------CACACACA------

Original motif     Consensus sequence: CCCCMAAMCAMCCMCMMMCV Reverse complement motif     Consensus sequence: BGRRRGRGGRTGRTTYGGGG


Dataset #: 4
Motif ID: 101
Motif name: AAAAAAAAAAA
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 7
Number of overlap: 8
Similarity score: 0.0764586

Alignment:
DVTGCATGCATGBH
------TGTGTGTG

Original motif     Consensus sequence: HVCATGCATGCABD Reverse complement motif     Consensus sequence: DVTGCATGCATGBH


Dataset #: 1 Motif ID: 3 Motif name: Motif 3

Original motif     Consensus sequence: AWATAMA Reverse complement motif     Consensus sequence: TYTATWT

Best Matches for Motif ID 3 (Highest to Lowest)

Dataset #: 4
Motif ID: 83
Motif name: wwTAAAwAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 7
Similarity score: 0.0482178

Alignment:
HHTWTTTADD
TYTATWT---

Original motif     Consensus sequence: DDTAAAWAHH Reverse complement motif     Consensus sequence: HHTWTTTADD


Dataset #: 1
Motif ID: 1
Motif name: Motif 1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 7
Similarity score: 0.0549847

Alignment:
AAAAWAAA
-AWATAMA

Original motif     Consensus sequence: AAAAWAAA Reverse complement motif     Consensus sequence: TTTWTTTT


Dataset #: 4
Motif ID: 74
Motif name: twTACATAvw
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 7
Similarity score: 0.0576662

Alignment:
DBTATGTAHH
TYTATWT---

Original motif     Consensus sequence: HHTACATAVD Reverse complement motif     Consensus sequence: DBTATGTAHH


Dataset #: 1
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 7
Similarity score: 0.0581758

Alignment:
AAAASAAA
-AWATAMA

Original motif     Consensus sequence: AAAASAAA Reverse complement motif     Consensus sequence: TTTSTTTT


Dataset #: 4
Motif ID: 102
Motif name: AAAAAAAAAAA
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 7
Similarity score: 0.0581792

Alignment:
TTTTTTTTTTT
--TYTATWT--

Original motif     Consensus sequence: AAAAAAAAAAA Reverse complement motif     Consensus sequence: TTTTTTTTTTT


Dataset #: 4
Motif ID: 92
Motif name: tyTCTkTkTCyy
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 7
Similarity score: 0.061865

Alignment:
VHGARAYAGAVV
---AWATAMA--

Original motif     Consensus sequence: BBTCTKTKTCHB Reverse complement motif     Consensus sequence: VHGARAYAGAVV


Dataset #: 4
Motif ID: 76
Motif name: wwWAAAAAwa
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 7
Similarity score: 0.0673905

Alignment:
HWTTTTTTWW
TYTATWT---

Original motif     Consensus sequence: WWAAAAAAWH Reverse complement motif     Consensus sequence: HWTTTTTTWW


Dataset #: 4
Motif ID: 69
Motif name: aaACAAAACaa
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 7
Similarity score: 0.0713162

Alignment:
TTGTTTTGTTT
----TYTATWT

Original motif     Consensus sequence: AAACAAAACAA Reverse complement motif     Consensus sequence: TTGTTTTGTTT


Dataset #: 2
Motif ID: 26
Motif name: Motif 26
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 7
Similarity score: 0.0754383

Alignment:
AAAAAAACAAARRA
--AWATAMA-----

Original motif     Consensus sequence: TKKTTTGTTTTTTT Reverse complement motif     Consensus sequence: AAAAAAACAAARRA


Dataset #: 4
Motif ID: 95
Motif name: CACACACACACA
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 7
Similarity score: 0.0767049

Alignment:
CACACACACACA
---AWATAMA--

Original motif     Consensus sequence: CACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTG


Dataset #: 1 Motif ID: 4 Motif name: Motif 4

Original motif     Consensus sequence: CYBCCTCC Reverse complement motif     Consensus sequence: GGAGGVMG

Best Matches for Motif ID 4 (Highest to Lowest)

Dataset #: 3
Motif ID: 48
Motif name: EWSR1-FLI1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 6
Number of overlap: 8
Similarity score: 0.022644

Alignment:
GGAAGGAAGGAAGGAAGG
-----GGAGGVMG-----

Original motif     Consensus sequence: GGAAGGAAGGAAGGAAGG Reverse complement motif     Consensus sequence: CCTTCCTTCCTTCCTTCC


Dataset #: 3
Motif ID: 32
Motif name: SP1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0247246

Alignment:
CCCCKCCCCC
--CYBCCTCC

Original motif     Consensus sequence: CCCCKCCCCC Reverse complement motif     Consensus sequence: GGGGGYGGGG


Dataset #: 4
Motif ID: 93
Motif name: rrAGGGGGArr
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0300296

Alignment:
VVTCCCCCTVV
---CYBCCTCC

Original motif     Consensus sequence: VVAGGGGGAVV Reverse complement motif     Consensus sequence: VVTCCCCCTVV


Dataset #: 4
Motif ID: 91
Motif name: ssCGCCsCCrCCCss
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.0335629

Alignment:
SSCGCCSCCGCCCSS
----CYBCCTCC---

Original motif     Consensus sequence: SSCGCCSCCGCCCSS Reverse complement motif     Consensus sequence: SSGGGCGGSGGCGSS


Dataset #: 3
Motif ID: 52
Motif name: Klf4
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0354458

Alignment:
GCCYCMCCCD
-CYBCCTCC-

Original motif     Consensus sequence: DGGGYGKGGC Reverse complement motif     Consensus sequence: GCCYCMCCCD


Dataset #: 1
Motif ID: 11
Motif name: Motif 11
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0389582

Alignment:
CCGCCGCC
CYBCCTCC

Original motif     Consensus sequence: CCGCCGCC Reverse complement motif     Consensus sequence: GGCGGCGG


Dataset #: 4
Motif ID: 88
Motif name: ssCrCYyYCGss
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.045829

Alignment:
BBCRCCYCCGBB
----CYBCCTCC

Original motif     Consensus sequence: BBCRCCYCCGBB Reverse complement motif     Consensus sequence: BBCGGKGGMGBB


Dataset #: 4
Motif ID: 73
Motif name: ssCGsCTCss
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0472644

Alignment:
VVCGSCTCBB
-CYBCCTCC-

Original motif     Consensus sequence: VVCGSCTCBB Reverse complement motif     Consensus sequence: BBGAGSCGVV


Dataset #: 3
Motif ID: 57
Motif name: MZF1_5-13
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.049303

Alignment:
BTHCCCCTYB
--CYBCCTCC

Original motif     Consensus sequence: BKAGGGGDAD Reverse complement motif     Consensus sequence: BTHCCCCTYB


Dataset #: 3
Motif ID: 34
Motif name: RREB1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.0528666

Alignment:
BGRRRGRGGRTGRTTYGGGG
----GGAGGVMG--------

Original motif     Consensus sequence: CCCCMAAMCAMCCMCMMMCV Reverse complement motif     Consensus sequence: BGRRRGRGGRTGRTTYGGGG


Dataset #: 1 Motif ID: 5 Motif name: Motif 5

Original motif     Consensus sequence: AAAASAAA Reverse complement motif     Consensus sequence: TTTSTTTT

Best Matches for Motif ID 5 (Highest to Lowest)

Dataset #: 4
Motif ID: 102
Motif name: AAAAAAAAAAA
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0150663

Alignment:
AAAAAAAAAAA
-AAAASAAA--

Original motif     Consensus sequence: AAAAAAAAAAA Reverse complement motif     Consensus sequence: TTTTTTTTTTT


Dataset #: 1
Motif ID: 1
Motif name: Motif 1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0155771

Alignment:
TTTWTTTT
TTTSTTTT

Original motif     Consensus sequence: AAAAWAAA Reverse complement motif     Consensus sequence: TTTWTTTT


Dataset #: 2
Motif ID: 26
Motif name: Motif 26
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.020143

Alignment:
AAAAAAACAAARRA
---AAAASAAA---

Original motif     Consensus sequence: TKKTTTGTTTTTTT Reverse complement motif     Consensus sequence: AAAAAAACAAARRA


Dataset #: 4
Motif ID: 76
Motif name: wwWAAAAAwa
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0517621

Alignment:
WWAAAAAAWH
--AAAASAAA

Original motif     Consensus sequence: WWAAAAAAWH Reverse complement motif     Consensus sequence: HWTTTTTTWW


Dataset #: 4
Motif ID: 69
Motif name: aaACAAAACaa
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0633085

Alignment:
AAACAAAACAA
AAAASAAA---

Original motif     Consensus sequence: AAACAAAACAA Reverse complement motif     Consensus sequence: TTGTTTTGTTT


Dataset #: 4
Motif ID: 92
Motif name: tyTCTkTkTCyy
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 8
Similarity score: 0.0636153

Alignment:
BBTCTKTKTCHB
TTTSTTTT----

Original motif     Consensus sequence: BBTCTKTKTCHB Reverse complement motif     Consensus sequence: VHGARAYAGAVV


Dataset #: 4
Motif ID: 86
Motif name: aaCAAAAACaa
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0687134

Alignment:
HHCAAAAACAH
---AAAASAAA

Original motif     Consensus sequence: HHCAAAAACAH Reverse complement motif     Consensus sequence: HTGTTTTTGHH


Dataset #: 1
Motif ID: 2
Motif name: Motif 2
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0740862

Alignment:
CACACACA
AAAASAAA

Original motif     Consensus sequence: CACACACA Reverse complement motif     Consensus sequence: TGTGTGTG


Dataset #: 4
Motif ID: 85
Motif name: wtATTTTTAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0762618

Alignment:
DHATTTTTADD
TTTSTTTT---

Original motif     Consensus sequence: DHATTTTTADD Reverse complement motif     Consensus sequence: DDTAAAAATHD


Dataset #: 2
Motif ID: 27
Motif name: Motif 27
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 7
Number of overlap: 8
Similarity score: 0.0769612

Alignment:
TGTGTGTGTGTKTG
------TTTSTTTT

Original motif     Consensus sequence: CAYACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTKTG


Dataset #: 1 Motif ID: 6 Motif name: Motif 6

Original motif     Consensus sequence: CCCCRCCC Reverse complement motif     Consensus sequence: GGGKGGGG

Best Matches for Motif ID 6 (Highest to Lowest)

Dataset #: 3
Motif ID: 52
Motif name: Klf4
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0404318

Alignment:
GCCYCMCCCD
-CCCCRCCC-

Original motif     Consensus sequence: DGGGYGKGGC Reverse complement motif     Consensus sequence: GCCYCMCCCD


Dataset #: 4
Motif ID: 89
Motif name: ccCCmCACCcc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0418011

Alignment:
HBCCMCACCHH
--CCCCRCCC-

Original motif     Consensus sequence: HBCCMCACCHH Reverse complement motif     Consensus sequence: DDGGTGRGGBD


Dataset #: 2
Motif ID: 23
Motif name: Motif 23
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0476511

Alignment:
GGGGMGGG
GGGKGGGG

Original motif     Consensus sequence: CCCRCCCC Reverse complement motif     Consensus sequence: GGGGMGGG


Dataset #: 3
Motif ID: 32
Motif name: SP1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0491071

Alignment:
GGGGGYGGGG
--GGGKGGGG

Original motif     Consensus sequence: CCCCKCCCCC Reverse complement motif     Consensus sequence: GGGGGYGGGG


Dataset #: 4
Motif ID: 91
Motif name: ssCGCCsCCrCCCss
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 6
Number of overlap: 8
Similarity score: 0.0491249

Alignment:
SSCGCCSCCGCCCSS
-----CCCCRCCC--

Original motif     Consensus sequence: SSCGCCSCCGCCCSS Reverse complement motif     Consensus sequence: SSGGGCGGSGGCGSS


Dataset #: 1
Motif ID: 11
Motif name: Motif 11
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0723432

Alignment:
GGCGGCGG
GGGKGGGG

Original motif     Consensus sequence: CCGCCGCC Reverse complement motif     Consensus sequence: GGCGGCGG


Dataset #: 4
Motif ID: 67
Motif name: ssGMsGRGCGss
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.0784423

Alignment:
BBCGCCCSGCVV
----CCCCRCCC

Original motif     Consensus sequence: VVGCSGGGCGBB Reverse complement motif     Consensus sequence: BBCGCCCSGCVV


Dataset #: 3
Motif ID: 51
Motif name: INSM1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0794271

Alignment:
MGCCCCCTGMCA
---CCCCRCCC-

Original motif     Consensus sequence: TGYCAGGGGGCR Reverse complement motif     Consensus sequence: MGCCCCCTGMCA


Dataset #: 1
Motif ID: 14
Motif name: Motif 14
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0808211

Alignment:
GKGTGKGC
GGGKGGGG

Original motif     Consensus sequence: GCRCACRC Reverse complement motif     Consensus sequence: GKGTGKGC


Dataset #: 4
Motif ID: 88
Motif name: ssCrCYyYCGss
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0819499

Alignment:
BBCGGKGGMGBB
---GGGKGGGG-

Original motif     Consensus sequence: BBCRCCYCCGBB Reverse complement motif     Consensus sequence: BBCGGKGGMGBB


Dataset #: 1 Motif ID: 7 Motif name: Motif 7

Original motif     Consensus sequence: ASASAGAA Reverse complement motif     Consensus sequence: TTCTSTST

Best Matches for Motif ID 7 (Highest to Lowest)

Dataset #: 4
Motif ID: 92
Motif name: tyTCTkTkTCyy
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.00355249

Alignment:
BBTCTKTKTCHB
-TTCTSTST---

Original motif     Consensus sequence: BBTCTKTKTCHB Reverse complement motif     Consensus sequence: VHGARAYAGAVV


Dataset #: 4
Motif ID: 69
Motif name: aaACAAAACaa
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0313478

Alignment:
AAACAAAACAA
ASASAGAA---

Original motif     Consensus sequence: AAACAAAACAA Reverse complement motif     Consensus sequence: TTGTTTTGTTT


Dataset #: 4
Motif ID: 82
Motif name: rmACAGCAGsr
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0319191

Alignment:
DVCTGCTGTVB
---TTCTSTST

Original motif     Consensus sequence: VVACAGCAGVD Reverse complement motif     Consensus sequence: DVCTGCTGTVB


Dataset #: 4
Motif ID: 95
Motif name: CACACACACACA
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0398795

Alignment:
TGTGTGTGTGTG
-TTCTSTST---

Original motif     Consensus sequence: CACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTG


Dataset #: 4
Motif ID: 79
Motif name: CACACACACACA
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0407034

Alignment:
TGTGTGTGTGTG
-TTCTSTST---

Original motif     Consensus sequence: CACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTG


Dataset #: 4
Motif ID: 102
Motif name: AAAAAAAAAAA
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0441956

Alignment:
AAAAAAAAAAA
ASASAGAA---

Original motif     Consensus sequence: AAAAAAAAAAA Reverse complement motif     Consensus sequence: TTTTTTTTTTT


Dataset #: 2
Motif ID: 26
Motif name: Motif 26
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.0451851

Alignment:
TKKTTTGTTTTTTT
----TTCTSTST--

Original motif     Consensus sequence: TKKTTTGTTTTTTT Reverse complement motif     Consensus sequence: AAAAAAACAAARRA


Dataset #: 2
Motif ID: 27
Motif name: Motif 27
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0493389

Alignment:
TGTGTGTGTGTKTG
-----TTCTSTST-

Original motif     Consensus sequence: CAYACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTKTG


Dataset #: 2
Motif ID: 25
Motif name: Motif 25
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 6
Number of overlap: 8
Similarity score: 0.0494079

Alignment:
CACACAVRCACACA
-----ASASAGAA-

Original motif     Consensus sequence: CACACAVRCACACA Reverse complement motif     Consensus sequence: TGTGTGKVTGTGTG


Dataset #: 3
Motif ID: 48
Motif name: EWSR1-FLI1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 8
Number of overlap: 8
Similarity score: 0.0559328

Alignment:
CCTTCCTTCCTTCCTTCC
---TTCTSTST-------

Original motif     Consensus sequence: GGAAGGAAGGAAGGAAGG Reverse complement motif     Consensus sequence: CCTTCCTTCCTTCCTTCC


Dataset #: 1 Motif ID: 8 Motif name: Motif 8

Original motif     Consensus sequence: TTTWWAAW Reverse complement motif     Consensus sequence: WTTWWAAA

Best Matches for Motif ID 8 (Highest to Lowest)

Dataset #: 4
Motif ID: 104
Motif name: wtTTWwAAAaw
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0

Alignment:
DDTTTWAAAHH
--TTTWWAAW-

Original motif     Consensus sequence: HHTTTWAAADD Reverse complement motif     Consensus sequence: DDTTTWAAAHH


Dataset #: 4
Motif ID: 85
Motif name: wtATTTTTAww
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0386447

Alignment:
DHATTTTTADD
---TTTWWAAW

Original motif     Consensus sequence: DHATTTTTADD Reverse complement motif     Consensus sequence: DDTAAAAATHD


Dataset #: 4
Motif ID: 81
Motif name: wwTAAwAAww
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.05878

Alignment:
HHTTWTTADD
--TTTWWAAW

Original motif     Consensus sequence: DDTAAWAAHH Reverse complement motif     Consensus sequence: HHTTWTTADD


Dataset #: 4
Motif ID: 76
Motif name: wwWAAAAAwa
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0595334

Alignment:
WWAAAAAAWH
WTTWWAAA--

Original motif     Consensus sequence: WWAAAAAAWH Reverse complement motif     Consensus sequence: HWTTTTTTWW


Dataset #: 4
Motif ID: 83
Motif name: wwTAAAwAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0618533

Alignment:
DDTAAAWAHH
WTTWWAAA--

Original motif     Consensus sequence: DDTAAAWAHH Reverse complement motif     Consensus sequence: HHTWTTTADD


Dataset #: 4
Motif ID: 71
Motif name: wyATTTTAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0715612

Alignment:
DHATTTTADD
--WTTWWAAA

Original motif     Consensus sequence: DHATTTTADD Reverse complement motif     Consensus sequence: DDTAAAATHD


Dataset #: 4
Motif ID: 86
Motif name: aaCAAAAACaa
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0766993

Alignment:
HHCAAAAACAH
WTTWWAAA---

Original motif     Consensus sequence: HHCAAAAACAH Reverse complement motif     Consensus sequence: HTGTTTTTGHH


Dataset #: 4
Motif ID: 102
Motif name: AAAAAAAAAAA
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0793607

Alignment:
TTTTTTTTTTT
---TTTWWAAW

Original motif     Consensus sequence: AAAAAAAAAAA Reverse complement motif     Consensus sequence: TTTTTTTTTTT


Dataset #: 1
Motif ID: 1
Motif name: Motif 1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0832518

Alignment:
TTTWTTTT
TTTWWAAW

Original motif     Consensus sequence: AAAAWAAA Reverse complement motif     Consensus sequence: TTTWTTTT


Dataset #: 4
Motif ID: 98
Motif name: wwTAATTAATTAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0855882

Alignment:
HDTAATTAATTAHD
----WTTWWAAA--

Original motif     Consensus sequence: HDTAATTAATTAHD Reverse complement motif     Consensus sequence: DHTAATTAATTADH


Dataset #: 1 Motif ID: 9 Motif name: Motif 9

Original motif     Consensus sequence: GCTGGGAW Reverse complement motif     Consensus sequence: WTCCCAGC

Best Matches for Motif ID 9 (Highest to Lowest)

Dataset #: 4
Motif ID: 80
Motif name: ssCwGGCCwGCss
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0777349

Alignment:
BBGCTGGCCWGBB
--GCTGGGAW---

Original motif     Consensus sequence: BBCWGGCCAGCBB Reverse complement motif     Consensus sequence: BBGCTGGCCWGBB


Dataset #: 1
Motif ID: 12
Motif name: Motif 12
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0778961

Alignment:
GCTGRCCT
GCTGGGAW

Original motif     Consensus sequence: AGGMCAGC Reverse complement motif     Consensus sequence: GCTGRCCT


Dataset #: 4
Motif ID: 89
Motif name: ccCCmCACCcc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0787949

Alignment:
DDGGTGRGGBD
--GCTGGGAW-

Original motif     Consensus sequence: HBCCMCACCHH Reverse complement motif     Consensus sequence: DDGGTGRGGBD


Dataset #: 4
Motif ID: 99
Motif name: sgCTGGCCAGcs
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0902995

Alignment:
VVCTGGCCAGBB
-GCTGGGAW---

Original motif     Consensus sequence: BBCTGGCCAGVV Reverse complement motif     Consensus sequence: VVCTGGCCAGBB


Dataset #: 4
Motif ID: 77
Motif name: ssGCTswGCCms
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0923672

Alignment:
VBGCTSAGCCHB
--GCTGGGAW--

Original motif     Consensus sequence: VBGCTSAGCCHB Reverse complement motif     Consensus sequence: BDGGCTSAGCBV


Dataset #: 3
Motif ID: 51
Motif name: INSM1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0966101

Alignment:
MGCCCCCTGMCA
--WTCCCAGC--

Original motif     Consensus sequence: TGYCAGGGGGCR Reverse complement motif     Consensus sequence: MGCCCCCTGMCA


Dataset #: 4
Motif ID: 93
Motif name: rrAGGGGGArr
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0986017

Alignment:
VVTCCCCCTVV
-WTCCCAGC--

Original motif     Consensus sequence: VVAGGGGGAVV Reverse complement motif     Consensus sequence: VVTCCCCCTVV


Dataset #: 3
Motif ID: 48
Motif name: EWSR1-FLI1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 9
Number of overlap: 8
Similarity score: 0.0991014

Alignment:
CCTTCCTTCCTTCCTTCC
--WTCCCAGC--------

Original motif     Consensus sequence: GGAAGGAAGGAAGGAAGG Reverse complement motif     Consensus sequence: CCTTCCTTCCTTCCTTCC


Dataset #: 4
Motif ID: 94
Motif name: ssCGCksCGss
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0999463

Alignment:
BBCGSRGCGVV
WTCCCAGC---

Original motif     Consensus sequence: VVCGCKSCGBB Reverse complement motif     Consensus sequence: BBCGSRGCGVV


Dataset #: 4
Motif ID: 67
Motif name: ssGMsGRGCGss
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.10192

Alignment:
BBCGCCCSGCVV
--WTCCCAGC--

Original motif     Consensus sequence: VVGCSGGGCGBB Reverse complement motif     Consensus sequence: BBCGCCCSGCVV


Dataset #: 1 Motif ID: 10 Motif name: Motif 10

Original motif     Consensus sequence: TAMATA Reverse complement motif     Consensus sequence: TATRTA

Best Matches for Motif ID 10 (Highest to Lowest)

Dataset #: 4
Motif ID: 74
Motif name: twTACATAvw
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 6
Similarity score: 0.0118037

Alignment:
HHTACATAVD
--TAMATA--

Original motif     Consensus sequence: HHTACATAVD Reverse complement motif     Consensus sequence: DBTATGTAHH


Dataset #: 4
Motif ID: 83
Motif name: wwTAAAwAww
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.0306891

Alignment:
DDTAAAWAHH
--TAMATA--

Original motif     Consensus sequence: DDTAAAWAHH Reverse complement motif     Consensus sequence: HHTWTTTADD


Dataset #: 4
Motif ID: 85
Motif name: wtATTTTTAww
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 6
Similarity score: 0.0556351

Alignment:
DDTAAAAATHD
--TAMATA---

Original motif     Consensus sequence: DHATTTTTADD Reverse complement motif     Consensus sequence: DDTAAAAATHD


Dataset #: 4
Motif ID: 100
Motif name: wrTGTATACAyw
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 6
Similarity score: 0.063312

Alignment:
HDTGTATACAHD
--TATRTA----

Original motif     Consensus sequence: HDTGTATACAHD Reverse complement motif     Consensus sequence: DHTGTATACADH


Dataset #: 4
Motif ID: 98
Motif name: wwTAATTAATTAww
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.0665502

Alignment:
DHTAATTAATTADH
------TAMATA--

Original motif     Consensus sequence: HDTAATTAATTAHD Reverse complement motif     Consensus sequence: DHTAATTAATTADH


Dataset #: 1
Motif ID: 2
Motif name: Motif 2
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 6
Similarity score: 0.0713843

Alignment:
TGTGTGTG
--TATRTA

Original motif     Consensus sequence: CACACACA Reverse complement motif     Consensus sequence: TGTGTGTG


Dataset #: 4
Motif ID: 97
Motif name: ryayAyAyrtGTRTrTry
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.0717552

Alignment:
DHAYAYAYRTGTGTRTDH
-----------TATRTA-

Original motif     Consensus sequence: DHAYAYAYRTGTGTRTDH Reverse complement motif     Consensus sequence: HDAMACACAKKTKTKTHD


Dataset #: 4
Motif ID: 75
Motif name: yayAyAyACATrya
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.0734948

Alignment:
HACAYAYACATRHD
------TAMATA--

Original motif     Consensus sequence: HACAYAYACATRHD Reverse complement motif     Consensus sequence: DHKATGTKTKTGTD


Dataset #: 1
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.073632

Alignment:
TTTWWAAW
--TATRTA

Original motif     Consensus sequence: TTTWWAAW Reverse complement motif     Consensus sequence: WTTWWAAA


Dataset #: 1
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.0746703

Alignment:
TYTATWT
-TAMATA

Original motif     Consensus sequence: AWATAMA Reverse complement motif     Consensus sequence: TYTATWT


Dataset #: 1 Motif ID: 11 Motif name: Motif 11

Original motif     Consensus sequence: CCGCCGCC Reverse complement motif     Consensus sequence: GGCGGCGG

Best Matches for Motif ID 11 (Highest to Lowest)

Dataset #: 4
Motif ID: 78
Motif name: sssCGssGCsss
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0257637

Alignment:
SSSCGSSGCSSS
--CCGCCGCC--

Original motif     Consensus sequence: SSSCGSSGCSSS Reverse complement motif     Consensus sequence: SSSGCSSCGSSS


Dataset #: 4
Motif ID: 91
Motif name: ssCGCCsCCrCCCss
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0356841

Alignment:
SSGGGCGGSGGCGSS
---GGCGGCGG----

Original motif     Consensus sequence: SSCGCCSCCGCCCSS Reverse complement motif     Consensus sequence: SSGGGCGGSGGCGSS


Dataset #: 1
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0379682

Alignment:
GGGKGGGG
GGCGGCGG

Original motif     Consensus sequence: CCCCRCCC Reverse complement motif     Consensus sequence: GGGKGGGG


Dataset #: 4
Motif ID: 88
Motif name: ssCrCYyYCGss
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0392404

Alignment:
BBCGGKGGMGBB
---GGCGGCGG-

Original motif     Consensus sequence: BBCRCCYCCGBB Reverse complement motif     Consensus sequence: BBCGGKGGMGBB


Dataset #: 4
Motif ID: 94
Motif name: ssCGCksCGss
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0444299

Alignment:
VVCGCKSCGBB
--GGCGGCGG-

Original motif     Consensus sequence: VVCGCKSCGBB Reverse complement motif     Consensus sequence: BBCGSRGCGVV


Dataset #: 3
Motif ID: 28
Motif name: Zfx
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.049392

Alignment:
BBVGCCBVGGCCTV
----CCGCCGCC--

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB


Dataset #: 1
Motif ID: 4
Motif name: Motif 4
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0505097

Alignment:
CYBCCTCC
CCGCCGCC

Original motif     Consensus sequence: CYBCCTCC Reverse complement motif     Consensus sequence: GGAGGVMG


Dataset #: 3
Motif ID: 52
Motif name: Klf4
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0512458

Alignment:
GCCYCMCCCD
-CCGCCGCC-

Original motif     Consensus sequence: DGGGYGKGGC Reverse complement motif     Consensus sequence: GCCYCMCCCD


Dataset #: 3
Motif ID: 32
Motif name: SP1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0543239

Alignment:
CCCCKCCCCC
--CCGCCGCC

Original motif     Consensus sequence: CCCCKCCCCC Reverse complement motif     Consensus sequence: GGGGGYGGGG


Dataset #: 3
Motif ID: 51
Motif name: INSM1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0580255

Alignment:
MGCCCCCTGMCA
---CCGCCGCC-

Original motif     Consensus sequence: TGYCAGGGGGCR Reverse complement motif     Consensus sequence: MGCCCCCTGMCA


Dataset #: 1 Motif ID: 12 Motif name: Motif 12

Original motif     Consensus sequence: AGGMCAGC Reverse complement motif     Consensus sequence: GCTGRCCT

Best Matches for Motif ID 12 (Highest to Lowest)

Dataset #: 4
Motif ID: 80
Motif name: ssCwGGCCwGCss
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0329398

Alignment:
BBCWGGCCAGCBB
---AGGMCAGC--

Original motif     Consensus sequence: BBCWGGCCAGCBB Reverse complement motif     Consensus sequence: BBGCTGGCCWGBB


Dataset #: 3
Motif ID: 59
Motif name: NR1H2RXRA
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 10
Number of overlap: 8
Similarity score: 0.0348586

Alignment:
GTTGACCTTTGACCTTT
GCTGRCCT---------

Original motif     Consensus sequence: AAAGGTCAAAGGTCAAC Reverse complement motif     Consensus sequence: GTTGACCTTTGACCTTT


Dataset #: 3
Motif ID: 35
Motif name: REST
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0382252

Alignment:
TTCAGCACCATGGACAGCKCC
----------AGGMCAGC---

Original motif     Consensus sequence: TTCAGCACCATGGACAGCKCC Reverse complement motif     Consensus sequence: GGYGCTGTCCATGGTGCTGAA


Dataset #: 4
Motif ID: 99
Motif name: sgCTGGCCAGcs
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0441629

Alignment:
BBCTGGCCAGVV
-GCTGRCCT---

Original motif     Consensus sequence: BBCTGGCCAGVV Reverse complement motif     Consensus sequence: VVCTGGCCAGBB


Dataset #: 3
Motif ID: 45
Motif name: ESR1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 6
Number of overlap: 8
Similarity score: 0.0543245

Alignment:
MGGTCAGGGTGACCTRDBHV
-------GCTGRCCT-----

Original motif     Consensus sequence: VDBHMAGGTCACCCTGACCY Reverse complement motif     Consensus sequence: MGGTCAGGGTGACCTRDBHV


Dataset #: 4
Motif ID: 70
Motif name: mkARGCCACG
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0574643

Alignment:
CKAGGCCACG
--AGGMCAGC

Original motif     Consensus sequence: CKAGGCCACG Reverse complement motif     Consensus sequence: CGTGGCCTYG


Dataset #: 3
Motif ID: 46
Motif name: ESR2
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 9
Number of overlap: 8
Similarity score: 0.0637872

Alignment:
BAGGYCABHBTGACCKHV
--------GCTGRCCT--

Original motif     Consensus sequence: VHRGGTCABDBTGMCCTB Reverse complement motif     Consensus sequence: BAGGYCABHBTGACCKHV


Dataset #: 1
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0653089

Alignment:
WTCCCAGC
AGGMCAGC

Original motif     Consensus sequence: GCTGGGAW Reverse complement motif     Consensus sequence: WTCCCAGC


Dataset #: 3
Motif ID: 53
Motif name: MIZF
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0689211

Alignment:
GCGGACGTTV
GCTGRCCT--

Original motif     Consensus sequence: BAACGTCCGC Reverse complement motif     Consensus sequence: GCGGACGTTV


Dataset #: 4
Motif ID: 77
Motif name: ssGCTswGCCms
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0700771

Alignment:
VBGCTSAGCCHB
--GCTGRCCT--

Original motif     Consensus sequence: VBGCTSAGCCHB Reverse complement motif     Consensus sequence: BDGGCTSAGCBV


Dataset #: 1 Motif ID: 13 Motif name: Motif 13

Original motif     Consensus sequence: GAGRCAGR Reverse complement motif     Consensus sequence: MCTGKCTC

Best Matches for Motif ID 13 (Highest to Lowest)

Dataset #: 4
Motif ID: 92
Motif name: tyTCTkTkTCyy
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0131318

Alignment:
VHGARAYAGAVV
--GAGRCAGR--

Original motif     Consensus sequence: BBTCTKTKTCHB Reverse complement motif     Consensus sequence: VHGARAYAGAVV


Dataset #: 4
Motif ID: 73
Motif name: ssCGsCTCss
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0334555

Alignment:
BBGAGSCGVV
--GAGRCAGR

Original motif     Consensus sequence: VVCGSCTCBB Reverse complement motif     Consensus sequence: BBGAGSCGVV


Dataset #: 3
Motif ID: 48
Motif name: EWSR1-FLI1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 8
Similarity score: 0.0397014

Alignment:
GGAAGGAAGGAAGGAAGG
------GAGRCAGR----

Original motif     Consensus sequence: GGAAGGAAGGAAGGAAGG Reverse complement motif     Consensus sequence: CCTTCCTTCCTTCCTTCC


Dataset #: 4
Motif ID: 99
Motif name: sgCTGGCCAGcs
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0475948

Alignment:
VVCTGGCCAGBB
-MCTGKCTC---

Original motif     Consensus sequence: BBCTGGCCAGVV Reverse complement motif     Consensus sequence: VVCTGGCCAGBB


Dataset #: 3
Motif ID: 35
Motif name: REST
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.049302

Alignment:
GGYGCTGTCCATGGTGCTGAA
---MCTGKCTC----------

Original motif     Consensus sequence: TTCAGCACCATGGACAGCKCC Reverse complement motif     Consensus sequence: GGYGCTGTCCATGGTGCTGAA


Dataset #: 2
Motif ID: 23
Motif name: Motif 23
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0551203

Alignment:
GGGGMGGG
GAGRCAGR

Original motif     Consensus sequence: CCCRCCCC Reverse complement motif     Consensus sequence: GGGGMGGG


Dataset #: 4
Motif ID: 80
Motif name: ssCwGGCCwGCss
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.055328

Alignment:
BBCWGGCCAGCBB
-MCTGKCTC----

Original motif     Consensus sequence: BBCWGGCCAGCBB Reverse complement motif     Consensus sequence: BBGCTGGCCWGBB


Dataset #: 4
Motif ID: 93
Motif name: rrAGGGGGArr
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0555608

Alignment:
VVAGGGGGAVV
---GAGRCAGR

Original motif     Consensus sequence: VVAGGGGGAVV Reverse complement motif     Consensus sequence: VVTCCCCCTVV


Dataset #: 3
Motif ID: 45
Motif name: ESR1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.055859

Alignment:
VDBHMAGGTCACCCTGACCY
------------MCTGKCTC

Original motif     Consensus sequence: VDBHMAGGTCACCCTGACCY Reverse complement motif     Consensus sequence: MGGTCAGGGTGACCTRDBHV


Dataset #: 1
Motif ID: 12
Motif name: Motif 12
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0588565

Alignment:
GCTGRCCT
MCTGKCTC

Original motif     Consensus sequence: AGGMCAGC Reverse complement motif     Consensus sequence: GCTGRCCT


Dataset #: 1 Motif ID: 14 Motif name: Motif 14

Original motif     Consensus sequence: GCRCACRC Reverse complement motif     Consensus sequence: GKGTGKGC

Best Matches for Motif ID 14 (Highest to Lowest)

Dataset #: 2
Motif ID: 27
Motif name: Motif 27
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0307099

Alignment:
CAYACACACACACA
---GCRCACRC---

Original motif     Consensus sequence: CAYACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTKTG


Dataset #: 4
Motif ID: 79
Motif name: CACACACACACA
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0357914

Alignment:
CACACACACACA
-GCRCACRC---

Original motif     Consensus sequence: CACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTG


Dataset #: 4
Motif ID: 95
Motif name: CACACACACACA
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0366948

Alignment:
CACACACACACA
-GCRCACRC---

Original motif     Consensus sequence: CACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTG


Dataset #: 3
Motif ID: 52
Motif name: Klf4
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.03983

Alignment:
DGGGYGKGGC
-GKGTGKGC-

Original motif     Consensus sequence: DGGGYGKGGC Reverse complement motif     Consensus sequence: GCCYCMCCCD


Dataset #: 2
Motif ID: 25
Motif name: Motif 25
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 6
Number of overlap: 8
Similarity score: 0.0418776

Alignment:
CACACAVRCACACA
-----GCRCACRC-

Original motif     Consensus sequence: CACACAVRCACACA Reverse complement motif     Consensus sequence: TGTGTGKVTGTGTG


Dataset #: 3
Motif ID: 44
Motif name: Egr1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0429433

Alignment:
HGCGTGGGCGK
-GKGTGKGC--

Original motif     Consensus sequence: HGCGTGGGCGK Reverse complement motif     Consensus sequence: YCGCCCACGCH


Dataset #: 1
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0496623

Alignment:
GGGKGGGG
GKGTGKGC

Original motif     Consensus sequence: CCCCRCCC Reverse complement motif     Consensus sequence: GGGKGGGG


Dataset #: 4
Motif ID: 89
Motif name: ccCCmCACCcc
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0505252

Alignment:
DDGGTGRGGBD
-GKGTGKGC--

Original motif     Consensus sequence: HBCCMCACCHH Reverse complement motif     Consensus sequence: DDGGTGRGGBD


Dataset #: 4
Motif ID: 96
Motif name: yrTGTGCACAyr
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0537384

Alignment:
BVTGTGCACABV
---GCRCACRC-

Original motif     Consensus sequence: BVTGTGCACABV Reverse complement motif     Consensus sequence: BBTGTGCACAVV


Dataset #: 4
Motif ID: 65
Motif name: ssCGrGCGss
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.067702

Alignment:
VBCGCMCGSV
-GCRCACRC-

Original motif     Consensus sequence: VSCGRGCGBV Reverse complement motif     Consensus sequence: VBCGCMCGSV


Dataset #: 1 Motif ID: 15 Motif name: Motif 15

Original motif     Consensus sequence: GRAAATG Reverse complement motif     Consensus sequence: CATTTKC

Best Matches for Motif ID 15 (Highest to Lowest)

Dataset #: 4
Motif ID: 71
Motif name: wyATTTTAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 7
Similarity score: 0.0397876

Alignment:
DHATTTTADD
-CATTTKC--

Original motif     Consensus sequence: DHATTTTADD Reverse complement motif     Consensus sequence: DDTAAAATHD


Dataset #: 4
Motif ID: 85
Motif name: wtATTTTTAww
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 7
Similarity score: 0.0408373

Alignment:
DDTAAAAATHD
---GRAAATG-

Original motif     Consensus sequence: DHATTTTTADD Reverse complement motif     Consensus sequence: DDTAAAAATHD


Dataset #: 4
Motif ID: 68
Motif name: dwCTTTTCwy
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 7
Similarity score: 0.0424119

Alignment:
DHCTTTTCHH
-CATTTKC--

Original motif     Consensus sequence: DHCTTTTCHH Reverse complement motif     Consensus sequence: DHGAAAAGHD


Dataset #: 4
Motif ID: 76
Motif name: wwWAAAAAwa
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 7
Similarity score: 0.0627776

Alignment:
WWAAAAAAWH
---GRAAATG

Original motif     Consensus sequence: WWAAAAAAWH Reverse complement motif     Consensus sequence: HWTTTTTTWW


Dataset #: 4
Motif ID: 97
Motif name: ryayAyAyrtGTRTrTry
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 8
Number of overlap: 7
Similarity score: 0.0639234

Alignment:
HDAMACACAKKTKTKTHD
-------CATTTKC----

Original motif     Consensus sequence: DHAYAYAYRTGTGTRTDH Reverse complement motif     Consensus sequence: HDAMACACAKKTKTKTHD


Dataset #: 4
Motif ID: 104
Motif name: wtTTWwAAAaw
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 7
Similarity score: 0.0667775

Alignment:
HHTTTWAAADD
----GRAAATG

Original motif     Consensus sequence: HHTTTWAAADD Reverse complement motif     Consensus sequence: DDTTTWAAAHH


Dataset #: 3
Motif ID: 36
Motif name: PPARGRXRA
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 6
Number of overlap: 7
Similarity score: 0.0672334

Alignment:
TGRCCTKTGHCCKAB
---CATTTKC-----

Original motif     Consensus sequence: BTRGGDCARAGGKCA Reverse complement motif     Consensus sequence: TGRCCTKTGHCCKAB


Dataset #: 4
Motif ID: 92
Motif name: tyTCTkTkTCyy
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 7
Similarity score: 0.0684709

Alignment:
BBTCTKTKTCHB
---CATTTKC--

Original motif     Consensus sequence: BBTCTKTKTCHB Reverse complement motif     Consensus sequence: VHGARAYAGAVV


Dataset #: 3
Motif ID: 38
Motif name: NR2F1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 7
Similarity score: 0.0685715

Alignment:
TGAMCTTTGMMCYT
---CATTTKC----

Original motif     Consensus sequence: TGAMCTTTGMMCYT Reverse complement motif     Consensus sequence: AKGYYCAAAGRTCA


Dataset #: 4
Motif ID: 96
Motif name: yrTGTGCACAyr
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 6
Number of overlap: 7
Similarity score: 0.0691109

Alignment:
BVTGTGCACABV
CATTTKC-----

Original motif     Consensus sequence: BVTGTGCACABV Reverse complement motif     Consensus sequence: BBTGTGCACAVV


Dataset #: 1 Motif ID: 16 Motif name: Motif 16

Original motif     Consensus sequence: CTGDGTTC Reverse complement motif     Consensus sequence: GAACDCAG

Best Matches for Motif ID 16 (Highest to Lowest)

Dataset #: 3
Motif ID: 33
Motif name: RXRAVDR
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0341587

Alignment:
GGGTCAWBGRGTTCA
------CTGDGTTC-

Original motif     Consensus sequence: GGGTCAWBGRGTTCA Reverse complement motif     Consensus sequence: TGAACKCBWTGACCC


Dataset #: 3
Motif ID: 48
Motif name: EWSR1-FLI1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 6
Number of overlap: 8
Similarity score: 0.0488413

Alignment:
GGAAGGAAGGAAGGAAGG
-----GAACDCAG-----

Original motif     Consensus sequence: GGAAGGAAGGAAGGAAGG Reverse complement motif     Consensus sequence: CCTTCCTTCCTTCCTTCC


Dataset #: 3
Motif ID: 38
Motif name: NR2F1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 6
Number of overlap: 8
Similarity score: 0.0594848

Alignment:
TGAMCTTTGMMCYT
-GAACDCAG-----

Original motif     Consensus sequence: TGAMCTTTGMMCYT Reverse complement motif     Consensus sequence: AKGYYCAAAGRTCA


Dataset #: 3
Motif ID: 40
Motif name: Ar
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 5
Number of overlap: 8
Similarity score: 0.0618424

Alignment:
VRVDGGHACAVDDKGTHCTDWH
----------CTGDGTTC----

Original motif     Consensus sequence: HWDAGHACRHHVTGTHCCHVMV Reverse complement motif     Consensus sequence: VRVDGGHACAVDDKGTHCTDWH


Dataset #: 4
Motif ID: 77
Motif name: ssGCTswGCCms
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0677701

Alignment:
BDGGCTSAGCBV
-GAACDCAG---

Original motif     Consensus sequence: VBGCTSAGCCHB Reverse complement motif     Consensus sequence: BDGGCTSAGCBV


Dataset #: 3
Motif ID: 35
Motif name: REST
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 5
Number of overlap: 8
Similarity score: 0.0698387

Alignment:
GGYGCTGTCCATGGTGCTGAA
---------CTGDGTTC----

Original motif     Consensus sequence: TTCAGCACCATGGACAGCKCC Reverse complement motif     Consensus sequence: GGYGCTGTCCATGGTGCTGAA


Dataset #: 4
Motif ID: 92
Motif name: tyTCTkTkTCyy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0714255

Alignment:
BBTCTKTKTCHB
---CTGDGTTC-

Original motif     Consensus sequence: BBTCTKTKTCHB Reverse complement motif     Consensus sequence: VHGARAYAGAVV


Dataset #: 4
Motif ID: 82
Motif name: rmACAGCAGsr
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0725605

Alignment:
VVACAGCAGVD
-GAACDCAG--

Original motif     Consensus sequence: VVACAGCAGVD Reverse complement motif     Consensus sequence: DVCTGCTGTVB


Dataset #: 3
Motif ID: 59
Motif name: NR1H2RXRA
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 7
Number of overlap: 8
Similarity score: 0.0734192

Alignment:
AAAGGTCAAAGGTCAAC
------CTGDGTTC---

Original motif     Consensus sequence: AAAGGTCAAAGGTCAAC Reverse complement motif     Consensus sequence: GTTGACCTTTGACCTTT


Dataset #: 2
Motif ID: 27
Motif name: Motif 27
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0745877

Alignment:
CAYACACACACACA
---GAACDCAG---

Original motif     Consensus sequence: CAYACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTKTG


Dataset #: 2 Motif ID: 17 Motif name: Motif 17

Original motif     Consensus sequence: RGGAAR Reverse complement motif     Consensus sequence: MTTCCK

Best Matches for Motif ID 17 (Highest to Lowest)

Dataset #: 3
Motif ID: 48
Motif name: EWSR1-FLI1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 12
Number of overlap: 6
Similarity score: 0.0146511

Alignment:
GGAAGGAAGGAAGGAAGG
-----------RGGAAR-

Original motif     Consensus sequence: GGAAGGAAGGAAGGAAGG Reverse complement motif     Consensus sequence: CCTTCCTTCCTTCCTTCC


Dataset #: 4
Motif ID: 93
Motif name: rrAGGGGGArr
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.0442472

Alignment:
VVAGGGGGAVV
-----RGGAAR

Original motif     Consensus sequence: VVAGGGGGAVV Reverse complement motif     Consensus sequence: VVTCCCCCTVV


Dataset #: 4
Motif ID: 68
Motif name: dwCTTTTCwy
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 5
Number of overlap: 6
Similarity score: 0.0560955

Alignment:
DHGAAAAGHD
RGGAAR----

Original motif     Consensus sequence: DHCTTTTCHH Reverse complement motif     Consensus sequence: DHGAAAAGHD


Dataset #: 3
Motif ID: 53
Motif name: MIZF
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 6
Similarity score: 0.0608243

Alignment:
BAACGTCCGC
---MTTCCK-

Original motif     Consensus sequence: BAACGTCCGC Reverse complement motif     Consensus sequence: GCGGACGTTV


Dataset #: 1
Motif ID: 4
Motif name: Motif 4
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.0620308

Alignment:
GGAGGVMG
RGGAAR--

Original motif     Consensus sequence: CYBCCTCC Reverse complement motif     Consensus sequence: GGAGGVMG


Dataset #: 3
Motif ID: 57
Motif name: MZF1_5-13
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.0753789

Alignment:
BKAGGGGDAD
----RGGAAR

Original motif     Consensus sequence: BKAGGGGDAD Reverse complement motif     Consensus sequence: BTHCCCCTYB


Dataset #: 3
Motif ID: 58
Motif name: NFKB1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 5
Number of overlap: 6
Similarity score: 0.0757695

Alignment:
GGGGAAKCCCC
-RGGAAR----

Original motif     Consensus sequence: GGGGRTTCCCC Reverse complement motif     Consensus sequence: GGGGAAKCCCC


Dataset #: 1
Motif ID: 13
Motif name: Motif 13
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.0767512

Alignment:
GAGRCAGR
-RGGAAR-

Original motif     Consensus sequence: GAGRCAGR Reverse complement motif     Consensus sequence: MCTGKCTC


Dataset #: 4
Motif ID: 92
Motif name: tyTCTkTkTCyy
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 7
Number of overlap: 6
Similarity score: 0.0768115

Alignment:
BBTCTKTKTCHB
MTTCCK------

Original motif     Consensus sequence: BBTCTKTKTCHB Reverse complement motif     Consensus sequence: VHGARAYAGAVV


Dataset #: 4
Motif ID: 89
Motif name: ccCCmCACCcc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 5
Number of overlap: 6
Similarity score: 0.0794812

Alignment:
DDGGTGRGGBD
-RGGAAR----

Original motif     Consensus sequence: HBCCMCACCHH Reverse complement motif     Consensus sequence: DDGGTGRGGBD


Dataset #: 2 Motif ID: 18 Motif name: Motif 18

Original motif     Consensus sequence: AMACA Reverse complement motif     Consensus sequence: TGTRT

Best Matches for Motif ID 18 (Highest to Lowest)

Dataset #: 1
Motif ID: 2
Motif name: Motif 2
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 5
Similarity score: 0

Alignment:
CACACACA
---AMACA

Original motif     Consensus sequence: CACACACA Reverse complement motif     Consensus sequence: TGTGTGTG


Dataset #: 4
Motif ID: 79
Motif name: CACACACACACA
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 5
Similarity score: 0.0148279

Alignment:
CACACACACACA
-----AMACA--

Original motif     Consensus sequence: CACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTG


Dataset #: 2
Motif ID: 27
Motif name: Motif 27
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 5
Similarity score: 0.0192752

Alignment:
CAYACACACACACA
-----AMACA----

Original motif     Consensus sequence: CAYACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTKTG


Dataset #: 4
Motif ID: 95
Motif name: CACACACACACA
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 5
Similarity score: 0.0228414

Alignment:
TGTGTGTGTGTG
----TGTRT---

Original motif     Consensus sequence: CACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTG


Dataset #: 2
Motif ID: 25
Motif name: Motif 25
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 10
Number of overlap: 5
Similarity score: 0.0233505

Alignment:
TGTGTGKVTGTGTG
TGTRT---------

Original motif     Consensus sequence: CACACAVRCACACA Reverse complement motif     Consensus sequence: TGTGTGKVTGTGTG


Dataset #: 4
Motif ID: 69
Motif name: aaACAAAACaa
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 5
Similarity score: 0.0274014

Alignment:
AAACAAAACAA
-----AMACA-

Original motif     Consensus sequence: AAACAAAACAA Reverse complement motif     Consensus sequence: TTGTTTTGTTT


Dataset #: 4
Motif ID: 86
Motif name: aaCAAAAACaa
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 5
Similarity score: 0.0291354

Alignment:
HHCAAAAACAH
-----AMACA-

Original motif     Consensus sequence: HHCAAAAACAH Reverse complement motif     Consensus sequence: HTGTTTTTGHH


Dataset #: 4
Motif ID: 97
Motif name: ryayAyAyrtGTRTrTry
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 10
Number of overlap: 5
Similarity score: 0.0293401

Alignment:
HDAMACACAKKTKTKTHD
----AMACA---------

Original motif     Consensus sequence: DHAYAYAYRTGTGTRTDH Reverse complement motif     Consensus sequence: HDAMACACAKKTKTKTHD


Dataset #: 4
Motif ID: 100
Motif name: wrTGTATACAyw
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 5
Similarity score: 0.0302831

Alignment:
HDTGTATACAHD
--TGTRT-----

Original motif     Consensus sequence: HDTGTATACAHD Reverse complement motif     Consensus sequence: DHTGTATACADH


Dataset #: 1
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 5
Similarity score: 0.0378142

Alignment:
AAAASAAA
-AMACA--

Original motif     Consensus sequence: AAAASAAA Reverse complement motif     Consensus sequence: TTTSTTTT


Dataset #: 2 Motif ID: 19 Motif name: Motif 19

Original motif     Consensus sequence: AGSCWGG Reverse complement motif     Consensus sequence: CCWGSCT

Best Matches for Motif ID 19 (Highest to Lowest)

Dataset #: 1
Motif ID: 13
Motif name: Motif 13
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 7
Similarity score: 0.0206869

Alignment:
MCTGKCTC
CCWGSCT-

Original motif     Consensus sequence: GAGRCAGR Reverse complement motif     Consensus sequence: MCTGKCTC


Dataset #: 3
Motif ID: 48
Motif name: EWSR1-FLI1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 7
Similarity score: 0.0395671

Alignment:
GGAAGGAAGGAAGGAAGG
-------AGSCWGG----

Original motif     Consensus sequence: GGAAGGAAGGAAGGAAGG Reverse complement motif     Consensus sequence: CCTTCCTTCCTTCCTTCC


Dataset #: 4
Motif ID: 80
Motif name: ssCwGGCCwGCss
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 7
Similarity score: 0.0484872

Alignment:
BBCWGGCCAGCBB
------CCWGSCT

Original motif     Consensus sequence: BBCWGGCCAGCBB Reverse complement motif     Consensus sequence: BBGCTGGCCWGBB


Dataset #: 3
Motif ID: 51
Motif name: INSM1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 6
Number of overlap: 7
Similarity score: 0.0494688

Alignment:
MGCCCCCTGMCA
-----CCWGSCT

Original motif     Consensus sequence: TGYCAGGGGGCR Reverse complement motif     Consensus sequence: MGCCCCCTGMCA


Dataset #: 4
Motif ID: 73
Motif name: ssCGsCTCss
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 7
Similarity score: 0.054651

Alignment:
BBGAGSCGVV
---AGSCWGG

Original motif     Consensus sequence: VVCGSCTCBB Reverse complement motif     Consensus sequence: BBGAGSCGVV


Dataset #: 4
Motif ID: 90
Motif name: ssCGsCwsCss
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 7
Similarity score: 0.0578314

Alignment:
BBCGSCWSCBB
--AGSCWGG--

Original motif     Consensus sequence: BBCGSCWSCBB Reverse complement motif     Consensus sequence: BBGSWGSCGBB


Dataset #: 3
Motif ID: 64
Motif name: Tcfcp2l1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 7
Similarity score: 0.0669354

Alignment:
CCAGYYHVADCCRG
CCWGSCT-------

Original motif     Consensus sequence: CCAGYYHVADCCRG Reverse complement motif     Consensus sequence: CKGGDTBDMMCTGG


Dataset #: 3
Motif ID: 35
Motif name: REST
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 7
Number of overlap: 7
Similarity score: 0.0693747

Alignment:
TTCAGCACCATGGACAGCKCC
------AGSCWGG--------

Original motif     Consensus sequence: TTCAGCACCATGGACAGCKCC Reverse complement motif     Consensus sequence: GGYGCTGTCCATGGTGCTGAA


Dataset #: 3
Motif ID: 32
Motif name: SP1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 7
Similarity score: 0.0695377

Alignment:
CCCCKCCCCC
-CCWGSCT--

Original motif     Consensus sequence: CCCCKCCCCC Reverse complement motif     Consensus sequence: GGGGGYGGGG


Dataset #: 4
Motif ID: 99
Motif name: sgCTGGCCAGcs
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 7
Similarity score: 0.0697712

Alignment:
BBCTGGCCAGVV
-CCWGSCT----

Original motif     Consensus sequence: BBCTGGCCAGVV Reverse complement motif     Consensus sequence: VVCTGGCCAGBB


Dataset #: 2 Motif ID: 20 Motif name: Motif 20

Original motif     Consensus sequence: CTCTGY Reverse complement motif     Consensus sequence: KCAGAG

Best Matches for Motif ID 20 (Highest to Lowest)

Dataset #: 4
Motif ID: 77
Motif name: ssGCTswGCCms
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 6
Similarity score: 0.0323407

Alignment:
VBGCTSAGCCHB
---CTCTGY---

Original motif     Consensus sequence: VBGCTSAGCCHB Reverse complement motif     Consensus sequence: BDGGCTSAGCBV


Dataset #: 1
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 6
Similarity score: 0.0352938

Alignment:
ASASAGAA
--KCAGAG

Original motif     Consensus sequence: ASASAGAA Reverse complement motif     Consensus sequence: TTCTSTST


Dataset #: 3
Motif ID: 59
Motif name: NR1H2RXRA
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 7
Number of overlap: 6
Similarity score: 0.0398495

Alignment:
AAAGGTCAAAGGTCAAC
-----KCAGAG------

Original motif     Consensus sequence: AAAGGTCAAAGGTCAAC Reverse complement motif     Consensus sequence: GTTGACCTTTGACCTTT


Dataset #: 3
Motif ID: 36
Motif name: PPARGRXRA
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 6
Similarity score: 0.0415907

Alignment:
BTRGGDCARAGGKCA
-----KCAGAG----

Original motif     Consensus sequence: BTRGGDCARAGGKCA Reverse complement motif     Consensus sequence: TGRCCTKTGHCCKAB


Dataset #: 1
Motif ID: 11
Motif name: Motif 11
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.0430865

Alignment:
CCGCCGCC
-CTCTGY-

Original motif     Consensus sequence: CCGCCGCC Reverse complement motif     Consensus sequence: GGCGGCGG


Dataset #: 4
Motif ID: 72
Motif name: ssCKCwsCGss
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.0439226

Alignment:
BVCGCWSCGBV
----CTCTGY-

Original motif     Consensus sequence: BVCGCWSCGBV Reverse complement motif     Consensus sequence: VBCGSWGCGVB


Dataset #: 3
Motif ID: 38
Motif name: NR2F1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 6
Similarity score: 0.0462597

Alignment:
AKGYYCAAAGRTCA
----KCAGAG----

Original motif     Consensus sequence: TGAMCTTTGMMCYT Reverse complement motif     Consensus sequence: AKGYYCAAAGRTCA


Dataset #: 4
Motif ID: 92
Motif name: tyTCTkTkTCyy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.0467436

Alignment:
BBTCTKTKTCHB
-CTCTGY-----

Original motif     Consensus sequence: BBTCTKTKTCHB Reverse complement motif     Consensus sequence: VHGARAYAGAVV


Dataset #: 3
Motif ID: 50
Motif name: HNF4A
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 6
Similarity score: 0.0481824

Alignment:
RGGBCAAAGKYCA
---KCAGAG----

Original motif     Consensus sequence: RGGBCAAAGKYCA Reverse complement motif     Consensus sequence: TGMYCTTTGBCCK


Dataset #: 3
Motif ID: 53
Motif name: MIZF
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 6
Similarity score: 0.049747

Alignment:
BAACGTCCGC
----CTCTGY

Original motif     Consensus sequence: BAACGTCCGC Reverse complement motif     Consensus sequence: GCGGACGTTV


Dataset #: 2 Motif ID: 21 Motif name: Motif 21

Original motif     Consensus sequence: ATKTM Reverse complement motif     Consensus sequence: RARAT

Best Matches for Motif ID 21 (Highest to Lowest)

Dataset #: 1
Motif ID: 15
Motif name: Motif 15
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 5
Similarity score: 0.0065927

Alignment:
CATTTKC
-ATKTM-

Original motif     Consensus sequence: GRAAATG Reverse complement motif     Consensus sequence: CATTTKC


Dataset #: 1
Motif ID: 10
Motif name: Motif 10
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 5
Similarity score: 0.0217628

Alignment:
TAMATA
-RARAT

Original motif     Consensus sequence: TAMATA Reverse complement motif     Consensus sequence: TATRTA


Dataset #: 4
Motif ID: 85
Motif name: wtATTTTTAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 5
Similarity score: 0.0314602

Alignment:
DDTAAAAATHD
----RARAT--

Original motif     Consensus sequence: DHATTTTTADD Reverse complement motif     Consensus sequence: DDTAAAAATHD


Dataset #: 4
Motif ID: 71
Motif name: wyATTTTAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 5
Similarity score: 0.0314958

Alignment:
DDTAAAATHD
---RARAT--

Original motif     Consensus sequence: DHATTTTADD Reverse complement motif     Consensus sequence: DDTAAAATHD


Dataset #: 4
Motif ID: 92
Motif name: tyTCTkTkTCyy
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 6
Number of overlap: 5
Similarity score: 0.0326182

Alignment:
VHGARAYAGAVV
--RARAT-----

Original motif     Consensus sequence: BBTCTKTKTCHB Reverse complement motif     Consensus sequence: VHGARAYAGAVV


Dataset #: 4
Motif ID: 74
Motif name: twTACATAvw
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 5
Similarity score: 0.0335447

Alignment:
DBTATGTAHH
---ATKTM--

Original motif     Consensus sequence: HHTACATAVD Reverse complement motif     Consensus sequence: DBTATGTAHH


Dataset #: 4
Motif ID: 83
Motif name: wwTAAAwAww
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 5
Similarity score: 0.0514182

Alignment:
HHTWTTTADD
---ATKTM--

Original motif     Consensus sequence: DDTAAAWAHH Reverse complement motif     Consensus sequence: HHTWTTTADD


Dataset #: 4
Motif ID: 76
Motif name: wwWAAAAAwa
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 5
Similarity score: 0.0597589

Alignment:
WWAAAAAAWH
----RARAT-

Original motif     Consensus sequence: WWAAAAAAWH Reverse complement motif     Consensus sequence: HWTTTTTTWW


Dataset #: 4
Motif ID: 101
Motif name: AAAAAAAAAAA
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 10
Number of overlap: 5
Similarity score: 0.0609742

Alignment:
DVTGCATGCATGBH
---------ATKTM

Original motif     Consensus sequence: HVCATGCATGCABD Reverse complement motif     Consensus sequence: DVTGCATGCATGBH


Dataset #: 4
Motif ID: 100
Motif name: wrTGTATACAyw
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 5
Similarity score: 0.0620607

Alignment:
DHTGTATACADH
-ATKTM------

Original motif     Consensus sequence: HDTGTATACAHD Reverse complement motif     Consensus sequence: DHTGTATACADH


Dataset #: 2 Motif ID: 22 Motif name: Motif 22

Original motif     Consensus sequence: CMGCRGC Reverse complement motif     Consensus sequence: GCKGCYG

Best Matches for Motif ID 22 (Highest to Lowest)

Dataset #: 1
Motif ID: 11
Motif name: Motif 11
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 7
Similarity score: 0.0224079

Alignment:
CCGCCGCC
CMGCRGC-

Original motif     Consensus sequence: CCGCCGCC Reverse complement motif     Consensus sequence: GGCGGCGG


Dataset #: 4
Motif ID: 82
Motif name: rmACAGCAGsr
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 7
Similarity score: 0.0263091

Alignment:
DVCTGCTGTVB
-GCKGCYG---

Original motif     Consensus sequence: VVACAGCAGVD Reverse complement motif     Consensus sequence: DVCTGCTGTVB


Dataset #: 4
Motif ID: 94
Motif name: ssCGCksCGss
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 7
Similarity score: 0.0468409

Alignment:
BBCGSRGCGVV
-CMGCRGC---

Original motif     Consensus sequence: VVCGCKSCGBB Reverse complement motif     Consensus sequence: BBCGSRGCGVV


Dataset #: 4
Motif ID: 90
Motif name: ssCGsCwsCss
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 7
Similarity score: 0.0481413

Alignment:
BBGSWGSCGBB
--GCKGCYG--

Original motif     Consensus sequence: BBCGSCWSCBB Reverse complement motif     Consensus sequence: BBGSWGSCGBB


Dataset #: 3
Motif ID: 35
Motif name: REST
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 13
Number of overlap: 7
Similarity score: 0.0604814

Alignment:
TTCAGCACCATGGACAGCKCC
--CMGCRGC------------

Original motif     Consensus sequence: TTCAGCACCATGGACAGCKCC Reverse complement motif     Consensus sequence: GGYGCTGTCCATGGTGCTGAA


Dataset #: 4
Motif ID: 78
Motif name: sssCGssGCsss
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 7
Similarity score: 0.0620984

Alignment:
SSSCGSSGCSSS
--CMGCRGC---

Original motif     Consensus sequence: SSSCGSSGCSSS Reverse complement motif     Consensus sequence: SSSGCSSCGSSS


Dataset #: 4
Motif ID: 84
Motif name: wsAGCTACwy
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 7
Similarity score: 0.0669388

Alignment:
VHGTAGCTVD
CMGCRGC---

Original motif     Consensus sequence: DVAGCTACHB Reverse complement motif     Consensus sequence: VHGTAGCTVD


Dataset #: 1
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 7
Similarity score: 0.0712961

Alignment:
CCCCRCCC
CMGCRGC-

Original motif     Consensus sequence: CCCCRCCC Reverse complement motif     Consensus sequence: GGGKGGGG


Dataset #: 3
Motif ID: 53
Motif name: MIZF
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 7
Similarity score: 0.0721831

Alignment:
GCGGACGTTV
GCKGCYG---

Original motif     Consensus sequence: BAACGTCCGC Reverse complement motif     Consensus sequence: GCGGACGTTV


Dataset #: 4
Motif ID: 72
Motif name: ssCKCwsCGss
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 7
Similarity score: 0.0730352

Alignment:
VBCGSWGCGVB
-CMGCRGC---

Original motif     Consensus sequence: BVCGCWSCGBV Reverse complement motif     Consensus sequence: VBCGSWGCGVB


Dataset #: 2 Motif ID: 23 Motif name: Motif 23

Original motif     Consensus sequence: CCCRCCCC Reverse complement motif     Consensus sequence: GGGGMGGG

Best Matches for Motif ID 23 (Highest to Lowest)

Dataset #: 1
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0476511

Alignment:
GGGKGGGG
GGGGMGGG

Original motif     Consensus sequence: CCCCRCCC Reverse complement motif     Consensus sequence: GGGKGGGG


Dataset #: 3
Motif ID: 32
Motif name: SP1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.05625

Alignment:
CCCCKCCCCC
-CCCRCCCC-

Original motif     Consensus sequence: CCCCKCCCCC Reverse complement motif     Consensus sequence: GGGGGYGGGG


Dataset #: 3
Motif ID: 52
Motif name: Klf4
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0600533

Alignment:
DGGGYGKGGC
GGGGMGGG--

Original motif     Consensus sequence: DGGGYGKGGC Reverse complement motif     Consensus sequence: GCCYCMCCCD


Dataset #: 4
Motif ID: 89
Motif name: ccCCmCACCcc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0605366

Alignment:
HBCCMCACCHH
---CCCRCCCC

Original motif     Consensus sequence: HBCCMCACCHH Reverse complement motif     Consensus sequence: DDGGTGRGGBD


Dataset #: 4
Motif ID: 91
Motif name: ssCGCCsCCrCCCss
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 7
Number of overlap: 8
Similarity score: 0.0617989

Alignment:
SSCGCCSCCGCCCSS
------CCCRCCCC-

Original motif     Consensus sequence: SSCGCCSCCGCCCSS Reverse complement motif     Consensus sequence: SSGGGCGGSGGCGSS


Dataset #: 4
Motif ID: 88
Motif name: ssCrCYyYCGss
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0740354

Alignment:
BBCRCCYCCGBB
CCCRCCCC----

Original motif     Consensus sequence: BBCRCCYCCGBB Reverse complement motif     Consensus sequence: BBCGGKGGMGBB


Dataset #: 3
Motif ID: 44
Motif name: Egr1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0789263

Alignment:
YCGCCCACGCH
---CCCRCCCC

Original motif     Consensus sequence: HGCGTGGGCGK Reverse complement motif     Consensus sequence: YCGCCCACGCH


Dataset #: 4
Motif ID: 67
Motif name: ssGMsGRGCGss
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0848347

Alignment:
BBCGCCCSGCVV
CCCRCCCC----

Original motif     Consensus sequence: VVGCSGGGCGBB Reverse complement motif     Consensus sequence: BBCGCCCSGCVV


Dataset #: 3
Motif ID: 34
Motif name: RREB1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 7
Number of overlap: 8
Similarity score: 0.0902899

Alignment:
CCCCMAAMCAMCCMCMMMCV
------CCCRCCCC------

Original motif     Consensus sequence: CCCCMAAMCAMCCMCMMMCV Reverse complement motif     Consensus sequence: BGRRRGRGGRTGRTTYGGGG


Dataset #: 4
Motif ID: 94
Motif name: ssCGCksCGss
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0961855

Alignment:
BBCGSRGCGVV
---GGGGMGGG

Original motif     Consensus sequence: VVCGCKSCGBB Reverse complement motif     Consensus sequence: BBCGSRGCGVV


Dataset #: 2 Motif ID: 24 Motif name: Motif 24

Original motif     Consensus sequence: CTGGGA Reverse complement motif     Consensus sequence: TCCCAG

Best Matches for Motif ID 24 (Highest to Lowest)

Dataset #: 1
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0

Alignment:
GCTGGGAW
-CTGGGA-

Original motif     Consensus sequence: GCTGGGAW Reverse complement motif     Consensus sequence: WTCCCAGC


Dataset #: 3
Motif ID: 35
Motif name: REST
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 9
Number of overlap: 6
Similarity score: 0.0575099

Alignment:
GGYGCTGTCCATGGTGCTGAA
-------TCCCAG--------

Original motif     Consensus sequence: TTCAGCACCATGGACAGCKCC Reverse complement motif     Consensus sequence: GGYGCTGTCCATGGTGCTGAA


Dataset #: 4
Motif ID: 93
Motif name: rrAGGGGGArr
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 6
Similarity score: 0.0578035

Alignment:
VVTCCCCCTVV
--TCCCAG---

Original motif     Consensus sequence: VVAGGGGGAVV Reverse complement motif     Consensus sequence: VVTCCCCCTVV


Dataset #: 3
Motif ID: 39
Motif name: MZF1_1-4
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0.0598868

Alignment:
TCCCCV
TCCCAG

Original motif     Consensus sequence: BGGGGA Reverse complement motif     Consensus sequence: TCCCCV


Dataset #: 4
Motif ID: 103
Motif name: ccCCAGTGCAbr
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 7
Number of overlap: 6
Similarity score: 0.0660266

Alignment:
HVCCAGTGCABD
TCCCAG------

Original motif     Consensus sequence: HVCCAGTGCABD Reverse complement motif     Consensus sequence: DBTGCACTGGVD


Dataset #: 3
Motif ID: 34
Motif name: RREB1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.0691671

Alignment:
BGRRRGRGGRTGRTTYGGGG
--------------CTGGGA

Original motif     Consensus sequence: CCCCMAAMCAMCCMCMMMCV Reverse complement motif     Consensus sequence: BGRRRGRGGRTGRTTYGGGG


Dataset #: 1
Motif ID: 16
Motif name: Motif 16
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0.0726527

Alignment:
CTGDGTTC
CTGGGA--

Original motif     Consensus sequence: CTGDGTTC Reverse complement motif     Consensus sequence: GAACDCAG


Dataset #: 3
Motif ID: 51
Motif name: INSM1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 6
Similarity score: 0.0740406

Alignment:
TGYCAGGGGGCR
---CTGGGA---

Original motif     Consensus sequence: TGYCAGGGGGCR Reverse complement motif     Consensus sequence: MGCCCCCTGMCA


Dataset #: 3
Motif ID: 29
Motif name: Zfp423
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 6
Similarity score: 0.0806694

Alignment:
GYRYCCMTKGGYRSC
---TCCCAG------

Original motif     Consensus sequence: GSMMCCYARGGKKKC Reverse complement motif     Consensus sequence: GYRYCCMTKGGYRSC


Dataset #: 4
Motif ID: 99
Motif name: sgCTGGCCAGcs
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.0827238

Alignment:
VVCTGGCCAGBB
----TCCCAG--

Original motif     Consensus sequence: BBCTGGCCAGVV Reverse complement motif     Consensus sequence: VVCTGGCCAGBB


Dataset #: 2 Motif ID: 25 Motif name: Motif 25

Original motif     Consensus sequence: CACACAVRCACACA Reverse complement motif     Consensus sequence: TGTGTGKVTGTGTG

Best Matches for Motif ID 25 (Highest to Lowest)

Dataset #: 2
Motif ID: 27
Motif name: Motif 27
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0190992

Alignment:
CAYACACACACACA
CACACAVRCACACA

Original motif     Consensus sequence: CAYACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTKTG


Dataset #: 4
Motif ID: 75
Motif name: yayAyAyACATrya
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0790984

Alignment:
HACAYAYACATRHD
CACACAVRCACACA

Original motif     Consensus sequence: HACAYAYACATRHD Reverse complement motif     Consensus sequence: DHKATGTKTKTGTD


Dataset #: 3
Motif ID: 34
Motif name: RREB1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 14
Similarity score: 0.0889603

Alignment:
CCCCMAAMCAMCCMCMMMCV
----CACACAVRCACACA--

Original motif     Consensus sequence: CCCCMAAMCAMCCMCMMMCV Reverse complement motif     Consensus sequence: BGRRRGRGGRTGRTTYGGGG


Dataset #: 4
Motif ID: 97
Motif name: ryayAyAyrtGTRTrTry
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 14
Similarity score: 0.0894862

Alignment:
DHAYAYAYRTGTGTRTDH
-TGTGTGKVTGTGTG---

Original motif     Consensus sequence: DHAYAYAYRTGTGTRTDH Reverse complement motif     Consensus sequence: HDAMACACAKKTKTKTHD


Dataset #: 4
Motif ID: 101
Motif name: AAAAAAAAAAA
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0983454

Alignment:
HVCATGCATGCABD
CACACAVRCACACA

Original motif     Consensus sequence: HVCATGCATGCABD Reverse complement motif     Consensus sequence: DVTGCATGCATGBH


Dataset #: 2
Motif ID: 26
Motif name: Motif 26
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 13
Similarity score: 0.581031

Alignment:
TKKTTTGTTTTTTT-
-TGTGTGKVTGTGTG

Original motif     Consensus sequence: TKKTTTGTTTTTTT Reverse complement motif     Consensus sequence: AAAAAAACAAARRA


Dataset #: 3
Motif ID: 33
Motif name: RXRAVDR
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 13
Similarity score: 0.596059

Alignment:
TGAACKCBWTGACCC-
--CACACAVRCACACA

Original motif     Consensus sequence: GGGTCAWBGRGTTCA Reverse complement motif     Consensus sequence: TGAACKCBWTGACCC


Dataset #: 4
Motif ID: 91
Motif name: ssCGCCsCCrCCCss
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 13
Similarity score: 0.600159

Alignment:
SSCGCCSCCGCCCSS-
--CACACAVRCACACA

Original motif     Consensus sequence: SSCGCCSCCGCCCSS Reverse complement motif     Consensus sequence: SSGGGCGGSGGCGSS


Dataset #: 4
Motif ID: 79
Motif name: CACACACACACA
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 1.01986

Alignment:
--CACACACACACA
CACACAVRCACACA

Original motif     Consensus sequence: CACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTG


Dataset #: 4
Motif ID: 95
Motif name: CACACACACACA
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 1.02642

Alignment:
TGTGTGTGTGTG--
TGTGTGKVTGTGTG

Original motif     Consensus sequence: CACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTG


Dataset #: 2 Motif ID: 26 Motif name: Motif 26

Original motif     Consensus sequence: TKKTTTGTTTTTTT Reverse complement motif     Consensus sequence: AAAAAAACAAARRA

Best Matches for Motif ID 26 (Highest to Lowest)

Dataset #: 4
Motif ID: 75
Motif name: yayAyAyACATrya
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0683766

Alignment:
DHKATGTKTKTGTD
TKKTTTGTTTTTTT

Original motif     Consensus sequence: HACAYAYACATRHD Reverse complement motif     Consensus sequence: DHKATGTKTKTGTD


Dataset #: 3
Motif ID: 48
Motif name: EWSR1-FLI1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 14
Similarity score: 0.0745773

Alignment:
GGAAGGAAGGAAGGAAGG
--AAAAAAACAAARRA--

Original motif     Consensus sequence: GGAAGGAAGGAAGGAAGG Reverse complement motif     Consensus sequence: CCTTCCTTCCTTCCTTCC


Dataset #: 2
Motif ID: 25
Motif name: Motif 25
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 13
Similarity score: 0.561185

Alignment:
-CACACAVRCACACA
AAAAAAACAAARRA-

Original motif     Consensus sequence: CACACAVRCACACA Reverse complement motif     Consensus sequence: TGTGTGKVTGTGTG


Dataset #: 2
Motif ID: 27
Motif name: Motif 27
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 13
Similarity score: 0.563745

Alignment:
-TGTGTGTGTGTKTG
TKKTTTGTTTTTTT-

Original motif     Consensus sequence: CAYACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTKTG


Dataset #: 3
Motif ID: 59
Motif name: NR1H2RXRA
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 13
Similarity score: 0.567794

Alignment:
-AAAGGTCAAAGGTCAAC
AAAAAAACAAARRA----

Original motif     Consensus sequence: AAAGGTCAAAGGTCAAC Reverse complement motif     Consensus sequence: GTTGACCTTTGACCTTT


Dataset #: 4
Motif ID: 98
Motif name: wwTAATTAATTAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 13
Similarity score: 0.570142

Alignment:
-DHTAATTAATTADH
AAAAAAACAAARRA-

Original motif     Consensus sequence: HDTAATTAATTAHD Reverse complement motif     Consensus sequence: DHTAATTAATTADH


Dataset #: 3
Motif ID: 36
Motif name: PPARGRXRA
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 13
Similarity score: 0.575193

Alignment:
-BTRGGDCARAGGKCA
AAAAAAACAAARRA--

Original motif     Consensus sequence: BTRGGDCARAGGKCA Reverse complement motif     Consensus sequence: TGRCCTKTGHCCKAB


Dataset #: 3
Motif ID: 40
Motif name: Ar
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 10
Number of overlap: 13
Similarity score: 0.576204

Alignment:
VRVDGGHACAVDDKGTHCTDWH-
---------TKKTTTGTTTTTTT

Original motif     Consensus sequence: HWDAGHACRHHVTGTHCCHVMV Reverse complement motif     Consensus sequence: VRVDGGHACAVDDKGTHCTDWH


Dataset #: 4
Motif ID: 97
Motif name: ryayAyAyrtGTRTrTry
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 7
Number of overlap: 12
Similarity score: 1.06681

Alignment:
--HDAMACACAKKTKTKTHD
AAAAAAACAAARRA------

Original motif     Consensus sequence: DHAYAYAYRTGTGTRTDH Reverse complement motif     Consensus sequence: HDAMACACAKKTKTKTHD


Dataset #: 4
Motif ID: 92
Motif name: tyTCTkTkTCyy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 1.07221

Alignment:
--BBTCTKTKTCHB
TKKTTTGTTTTTTT

Original motif     Consensus sequence: BBTCTKTKTCHB Reverse complement motif     Consensus sequence: VHGARAYAGAVV


Dataset #: 2 Motif ID: 27 Motif name: Motif 27

Original motif     Consensus sequence: CAYACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTKTG

Best Matches for Motif ID 27 (Highest to Lowest)

Dataset #: 2
Motif ID: 25
Motif name: Motif 25
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0198904

Alignment:
CACACAVRCACACA
CAYACACACACACA

Original motif     Consensus sequence: CACACAVRCACACA Reverse complement motif     Consensus sequence: TGTGTGKVTGTGTG


Dataset #: 4
Motif ID: 75
Motif name: yayAyAyACATrya
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0728259

Alignment:
HACAYAYACATRHD
CAYACACACACACA

Original motif     Consensus sequence: HACAYAYACATRHD Reverse complement motif     Consensus sequence: DHKATGTKTKTGTD


Dataset #: 3
Motif ID: 34
Motif name: RREB1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 14
Similarity score: 0.0866168

Alignment:
CCCCMAAMCAMCCMCMMMCV
----CAYACACACACACA--

Original motif     Consensus sequence: CCCCMAAMCAMCCMCMMMCV Reverse complement motif     Consensus sequence: BGRRRGRGGRTGRTTYGGGG


Dataset #: 4
Motif ID: 97
Motif name: ryayAyAyrtGTRTrTry
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 14
Similarity score: 0.0949484

Alignment:
DHAYAYAYRTGTGTRTDH
---TGTGTGTGTGTKTG-

Original motif     Consensus sequence: DHAYAYAYRTGTGTRTDH Reverse complement motif     Consensus sequence: HDAMACACAKKTKTKTHD


Dataset #: 4
Motif ID: 101
Motif name: AAAAAAAAAAA
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0966618

Alignment:
HVCATGCATGCABD
CAYACACACACACA

Original motif     Consensus sequence: HVCATGCATGCABD Reverse complement motif     Consensus sequence: DVTGCATGCATGBH


Dataset #: 2
Motif ID: 26
Motif name: Motif 26
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 13
Similarity score: 0.584382

Alignment:
AAAAAAACAAARRA-
-CAYACACACACACA

Original motif     Consensus sequence: TKKTTTGTTTTTTT Reverse complement motif     Consensus sequence: AAAAAAACAAARRA


Dataset #: 4
Motif ID: 79
Motif name: CACACACACACA
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 1

Alignment:
--CACACACACACA
CAYACACACACACA

Original motif     Consensus sequence: CACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTG


Dataset #: 4
Motif ID: 95
Motif name: CACACACACACA
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 1.00916

Alignment:
TGTGTGTGTGTG--
TGTGTGTGTGTKTG

Original motif     Consensus sequence: CACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTG


Dataset #: 4
Motif ID: 92
Motif name: tyTCTkTkTCyy
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 1.08698

Alignment:
BBTCTKTKTCHB--
TGTGTGTGTGTKTG

Original motif     Consensus sequence: BBTCTKTKTCHB Reverse complement motif     Consensus sequence: VHGARAYAGAVV


Dataset #: 3
Motif ID: 51
Motif name: INSM1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 1.09649

Alignment:
--TGYCAGGGGGCR
TGTGTGTGTGTKTG

Original motif     Consensus sequence: TGYCAGGGGGCR Reverse complement motif     Consensus sequence: MGCCCCCTGMCA


Dataset #: 3 Motif ID: 28 Motif name: Zfx

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB

Best Matches for Motif ID 28 (Highest to Lowest)

Dataset #: 4
Motif ID: 91
Motif name: ssCGCCsCCrCCCss
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0478501

Alignment:
SSCGCCSCCGCCCSS
BBVGCCBVGGCCTV-

Original motif     Consensus sequence: SSCGCCSCCGCCCSS Reverse complement motif     Consensus sequence: SSGGGCGGSGGCGSS


Dataset #: 3
Motif ID: 61
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 14
Similarity score: 0.0611182

Alignment:
DGVBCABTGDWGCGKRRCSR
--BBVGCCBVGGCCTV----

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 3
Motif ID: 46
Motif name: ESR2
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 14
Similarity score: 0.0635714

Alignment:
BAGGYCABHBTGACCKHV
---BBVGCCBVGGCCTV-

Original motif     Consensus sequence: VHRGGTCABDBTGMCCTB Reverse complement motif     Consensus sequence: BAGGYCABHBTGACCKHV


Dataset #: 3
Motif ID: 45
Motif name: ESR1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 5
Number of overlap: 14
Similarity score: 0.0722733

Alignment:
MGGTCAGGGTGACCTRDBHV
--BBVGCCBVGGCCTV----

Original motif     Consensus sequence: VDBHMAGGTCACCCTGACCY Reverse complement motif     Consensus sequence: MGGTCAGGGTGACCTRDBHV


Dataset #: 3
Motif ID: 64
Motif name: Tcfcp2l1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0732898

Alignment:
CCAGYYHVADCCRG
BBVGCCBVGGCCTV

Original motif     Consensus sequence: CCAGYYHVADCCRG Reverse complement motif     Consensus sequence: CKGGDTBDMMCTGG


Dataset #: 3
Motif ID: 29
Motif name: Zfp423
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 14
Similarity score: 0.0747812

Alignment:
GYRYCCMTKGGYRSC
-VAGGCCBBGGCVBB

Original motif     Consensus sequence: GSMMCCYARGGKKKC Reverse complement motif     Consensus sequence: GYRYCCMTKGGYRSC


Dataset #: 3
Motif ID: 37
Motif name: PLAG1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0796879

Alignment:
CCCCCTTGGGCCCC
BBVGCCBVGGCCTV

Original motif     Consensus sequence: GGGGCCCAAGGGGG Reverse complement motif     Consensus sequence: CCCCCTTGGGCCCC


Dataset #: 3
Motif ID: 35
Motif name: REST
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 14
Similarity score: 0.0812253

Alignment:
GGYGCTGTCCATGGTGCTGAA
----VAGGCCBBGGCVBB---

Original motif     Consensus sequence: TTCAGCACCATGGACAGCKCC Reverse complement motif     Consensus sequence: GGYGCTGTCCATGGTGCTGAA


Dataset #: 3
Motif ID: 40
Motif name: Ar
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 14
Similarity score: 0.0832838

Alignment:
HWDAGHACRHHVTGTHCCHVMV
-----VAGGCCBBGGCVBB---

Original motif     Consensus sequence: HWDAGHACRHHVTGTHCCHVMV Reverse complement motif     Consensus sequence: VRVDGGHACAVDDKGTHCTDWH


Dataset #: 3
Motif ID: 36
Motif name: PPARGRXRA
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0836605

Alignment:
TGRCCTKTGHCCKAB
BBVGCCBVGGCCTV-

Original motif     Consensus sequence: BTRGGDCARAGGKCA Reverse complement motif     Consensus sequence: TGRCCTKTGHCCKAB


Dataset #: 3 Motif ID: 29 Motif name: Zfp423

Original motif     Consensus sequence: GSMMCCYARGGKKKC Reverse complement motif     Consensus sequence: GYRYCCMTKGGYRSC

Best Matches for Motif ID 29 (Highest to Lowest)

Dataset #: 3
Motif ID: 40
Motif name: Ar
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 15
Similarity score: 0.0465445

Alignment:
HWDAGHACRHHVTGTHCCHVMV
---GSMMCCYARGGKKKC----

Original motif     Consensus sequence: HWDAGHACRHHVTGTHCCHVMV Reverse complement motif     Consensus sequence: VRVDGGHACAVDDKGTHCTDWH


Dataset #: 3
Motif ID: 61
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 15
Similarity score: 0.0466076

Alignment:
DGVBCABTGDWGCGKRRCSR
--GSMMCCYARGGKKKC---

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 3
Motif ID: 35
Motif name: REST
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 15
Similarity score: 0.0475403

Alignment:
TTCAGCACCATGGACAGCKCC
---GYRYCCMTKGGYRSC---

Original motif     Consensus sequence: TTCAGCACCATGGACAGCKCC Reverse complement motif     Consensus sequence: GGYGCTGTCCATGGTGCTGAA


Dataset #: 4
Motif ID: 97
Motif name: ryayAyAyrtGTRTrTry
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 15
Similarity score: 0.0497128

Alignment:
DHAYAYAYRTGTGTRTDH
--GYRYCCMTKGGYRSC-

Original motif     Consensus sequence: DHAYAYAYRTGTGTRTDH Reverse complement motif     Consensus sequence: HDAMACACAKKTKTKTHD


Dataset #: 3
Motif ID: 33
Motif name: RXRAVDR
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 15
Similarity score: 0.053047

Alignment:
GGGTCAWBGRGTTCA
GYRYCCMTKGGYRSC

Original motif     Consensus sequence: GGGTCAWBGRGTTCA Reverse complement motif     Consensus sequence: TGAACKCBWTGACCC


Dataset #: 3
Motif ID: 37
Motif name: PLAG1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.534468

Alignment:
GGGGCCCAAGGGGG-
GSMMCCYARGGKKKC

Original motif     Consensus sequence: GGGGCCCAAGGGGG Reverse complement motif     Consensus sequence: CCCCCTTGGGCCCC


Dataset #: 3
Motif ID: 28
Motif name: Zfx
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.54645

Alignment:
-VAGGCCBBGGCVBB
GYRYCCMTKGGYRSC

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB


Dataset #: 3
Motif ID: 45
Motif name: ESR1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 8
Number of overlap: 13
Similarity score: 1.03908

Alignment:
--VDBHMAGGTCACCCTGACCY
GYRYCCMTKGGYRSC-------

Original motif     Consensus sequence: VDBHMAGGTCACCCTGACCY Reverse complement motif     Consensus sequence: MGGTCAGGGTGACCTRDBHV


Dataset #: 3
Motif ID: 34
Motif name: RREB1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 8
Number of overlap: 13
Similarity score: 1.05606

Alignment:
BGRRRGRGGRTGRTTYGGGG--
-------GYRYCCMTKGGYRSC

Original motif     Consensus sequence: CCCCMAAMCAMCCMCMMMCV Reverse complement motif     Consensus sequence: BGRRRGRGGRTGRTTYGGGG


Dataset #: 4
Motif ID: 88
Motif name: ssCrCYyYCGss
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 1.54285

Alignment:
---BBCGGKGGMGBB
GYRYCCMTKGGYRSC

Original motif     Consensus sequence: BBCRCCYCCGBB Reverse complement motif     Consensus sequence: BBCGGKGGMGBB


Dataset #: 3 Motif ID: 30 Motif name: ZEB1

Original motif     Consensus sequence: CACCTD Reverse complement motif     Consensus sequence: HAGGTG

Best Matches for Motif ID 30 (Highest to Lowest)

Dataset #: 3
Motif ID: 62
Motif name: RORA_1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 6
Similarity score: 0.0141289

Alignment:
TGACCTDVWT
-CACCTD---

Original motif     Consensus sequence: AWVDAGGTCA Reverse complement motif     Consensus sequence: TGACCTDVWT


Dataset #: 3
Motif ID: 35
Motif name: REST
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 6
Number of overlap: 6
Similarity score: 0.0143133

Alignment:
GGYGCTGTCCATGGTGCTGAA
----------HAGGTG-----

Original motif     Consensus sequence: TTCAGCACCATGGACAGCKCC Reverse complement motif     Consensus sequence: GGYGCTGTCCATGGTGCTGAA


Dataset #: 4
Motif ID: 89
Motif name: ccCCmCACCcc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.0148347

Alignment:
HBCCMCACCHH
-----CACCTD

Original motif     Consensus sequence: HBCCMCACCHH Reverse complement motif     Consensus sequence: DDGGTGRGGBD


Dataset #: 4
Motif ID: 93
Motif name: rrAGGGGGArr
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 6
Similarity score: 0.0194512

Alignment:
VVAGGGGGAVV
-HAGGTG----

Original motif     Consensus sequence: VVAGGGGGAVV Reverse complement motif     Consensus sequence: VVTCCCCCTVV


Dataset #: 3
Motif ID: 41
Motif name: Arnt
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.0207244

Alignment:
CACGTG
CACCTD

Original motif     Consensus sequence: CACGTG Reverse complement motif     Consensus sequence: CACGTG


Dataset #: 3
Motif ID: 47
Motif name: Esrrb
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0.0207244

Alignment:
CACGTG
HAGGTG

Original motif     Consensus sequence: CACGTG Reverse complement motif     Consensus sequence: CACGTG


Dataset #: 3
Motif ID: 59
Motif name: NR1H2RXRA
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.0232753

Alignment:
GTTGACCTTTGACCTTT
----------CACCTD-

Original motif     Consensus sequence: AAAGGTCAAAGGTCAAC Reverse complement motif     Consensus sequence: GTTGACCTTTGACCTTT


Dataset #: 3
Motif ID: 49
Motif name: HIF1AARNT
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.0237889

Alignment:
VBACGTGV
-HAGGTG-

Original motif     Consensus sequence: VBACGTGV Reverse complement motif     Consensus sequence: VCACGTBV


Dataset #: 3
Motif ID: 51
Motif name: INSM1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 6
Similarity score: 0.0262123

Alignment:
TGYCAGGGGGCR
---HAGGTG---

Original motif     Consensus sequence: TGYCAGGGGGCR Reverse complement motif     Consensus sequence: MGCCCCCTGMCA


Dataset #: 3
Motif ID: 36
Motif name: PPARGRXRA
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 9
Number of overlap: 6
Similarity score: 0.0264837

Alignment:
TGRCCTKTGHCCKAB
-CACCTD--------

Original motif     Consensus sequence: BTRGGDCARAGGKCA Reverse complement motif     Consensus sequence: TGRCCTKTGHCCKAB


Dataset #: 3 Motif ID: 31 Motif name: TFAP2A

Original motif     Consensus sequence: GCCBBVRGS Reverse complement motif     Consensus sequence: SCMVBBGGC

Best Matches for Motif ID 31 (Highest to Lowest)

Dataset #: 3
Motif ID: 28
Motif name: Zfx
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 9
Similarity score: 0.0355616

Alignment:
BBVGCCBVGGCCTV
---SCMVBBGGC--

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB


Dataset #: 4
Motif ID: 67
Motif name: ssGMsGRGCGss
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 9
Similarity score: 0.0612124

Alignment:
BBCGCCCSGCVV
---GCCBBVRGS

Original motif     Consensus sequence: VVGCSGGGCGBB Reverse complement motif     Consensus sequence: BBCGCCCSGCVV


Dataset #: 3
Motif ID: 37
Motif name: PLAG1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 9
Similarity score: 0.0638957

Alignment:
GGGGCCCAAGGGGG
---GCCBBVRGS--

Original motif     Consensus sequence: GGGGCCCAAGGGGG Reverse complement motif     Consensus sequence: CCCCCTTGGGCCCC


Dataset #: 3
Motif ID: 29
Motif name: Zfp423
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 9
Similarity score: 0.0662526

Alignment:
GYRYCCMTKGGYRSC
---SCMVBBGGC---

Original motif     Consensus sequence: GSMMCCYARGGKKKC Reverse complement motif     Consensus sequence: GYRYCCMTKGGYRSC


Dataset #: 3
Motif ID: 45
Motif name: ESR1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 9
Similarity score: 0.067504

Alignment:
MGGTCAGGGTGACCTRDBHV
----------GCCBBVRGS-

Original motif     Consensus sequence: VDBHMAGGTCACCCTGACCY Reverse complement motif     Consensus sequence: MGGTCAGGGTGACCTRDBHV


Dataset #: 4
Motif ID: 88
Motif name: ssCrCYyYCGss
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 9
Similarity score: 0.0711479

Alignment:
BBCRCCYCCGBB
---GCCBBVRGS

Original motif     Consensus sequence: BBCRCCYCCGBB Reverse complement motif     Consensus sequence: BBCGGKGGMGBB


Dataset #: 4
Motif ID: 78