**************************************************************************************************************************************************************************************************** MOTIFSIM - Motif Similarity Detection Tool Version 2.2 **************************************************************************************************************************************************************************************************** INPUT **************************************************************************************************************************************************************************************************** Input Parameters Number of files: 4 Number of top significant motifs: 10 Number of best matches: 10 Similarity cutoff: >= 0.75 Matching motif database: UniProbe Mus Musculus Motif tree: Yes Combined similar motifs: Yes Output file type: All Output file format: All Input files and motif counts File name Count of motifs Dataset # DREME_DM721.txt 16 1 MEME-ChIP_DM721.txt 11 2 PScanChIP_DM721.txt 37 3 RSAT_peak-motifs_DM721.txt 40 4 **************************************************************************************************************************************************************************************************** RESULTS **************************************************************************************************************************************************************************************************** ****************************************************************** Top 10 Significant Motifs - Global Matching (Highest to Lowest) ****************************************************************** Dataset #: 2 Motif ID: 18 Motif name: Motif 18 Consensus sequence (original motif): AMACA Consensus sequence (reverse complement motif): TGTRT *************************************************************** Best Matches for Top Significant Motif ID 18 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 2 Motif 2 Original Motif Original Motif Forward 4 5 0 Consensus sequence (original motif): CACACACA Consensus sequence (reverse complement motif): TGTGTGTG Alignment: CACACACA ---AMACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 79 CACACACACACA Reverse Complement Reverse Complement Forward 3 5 0.0148279 Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG Alignment: TGTGTGTGTGTG --TGTRT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 95 CACACACACACA Original Motif Original Motif Forward 4 5 0.0228414 Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG Alignment: CACACACACACA ---AMACA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 69 aaACAAAACaa Original Motif Original Motif Forward 6 5 0.0274014 Consensus sequence (original motif): AAACAAAACAA Consensus sequence (reverse complement motif): TTGTTTTGTTT Alignment: AAACAAAACAA -----AMACA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 86 aaCAAAAACaa Original Motif Original Motif Forward 6 5 0.0291354 Consensus sequence (original motif): HHCAAAAACAH Consensus sequence (reverse complement motif): HTGTTTTTGHH Alignment: HHCAAAAACAH -----AMACA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 97 ryayAyAyrtGTRTrTry Original Motif Reverse Complement Backward 10 5 0.0293401 Consensus sequence (original motif): DHAYAYAYRTGTGTRTDH Consensus sequence (reverse complement motif): HDAMACACAKKTKTKTHD Alignment: HDAMACACAKKTKTKTHD ----AMACA--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 100 wrTGTATACAyw Reverse Complement Original Motif Backward 6 5 0.0302831 Consensus sequence (original motif): HDTGTATACAHD Consensus sequence (reverse complement motif): DHTGTATACADH Alignment: HDTGTATACAHD --TGTRT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 5 Motif 5 Original Motif Original Motif Backward 3 5 0.0378142 Consensus sequence (original motif): AAAASAAA Consensus sequence (reverse complement motif): TTTSTTTT Alignment: AAAASAAA -AMACA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 92 tyTCTkTkTCyy Original Motif Reverse Complement Backward 5 5 0.0390126 Consensus sequence (original motif): BBTCTKTKTCHB Consensus sequence (reverse complement motif): VHGARAYAGAVV Alignment: VHGARAYAGAVV ---AMACA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 14 Motif 14 Reverse Complement Reverse Complement Backward 3 5 0.042464 Consensus sequence (original motif): GCRCACRC Consensus sequence (reverse complement motif): GKGTGKGC Alignment: GKGTGKGC -TGTRT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 30 Motif name: ZEB1 Consensus sequence (original motif): CACCTD Consensus sequence (reverse complement motif): HAGGTG *************************************************************** Best Matches for Top Significant Motif ID 30 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 89 ccCCmCACCcc Original Motif Original Motif Backward 1 6 0.0148347 Consensus sequence (original motif): HBCCMCACCHH Consensus sequence (reverse complement motif): DDGGTGRGGBD Alignment: HBCCMCACCHH -----CACCTD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 93 rrAGGGGGArr Reverse Complement Original Motif Backward 5 6 0.0194512 Consensus sequence (original motif): VVAGGGGGAVV Consensus sequence (reverse complement motif): VVTCCCCCTVV Alignment: VVAGGGGGAVV -HAGGTG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 75 yayAyAyACATrya Original Motif Original Motif Forward 7 6 0.0270731 Consensus sequence (original motif): HACAYAYACATRHD Consensus sequence (reverse complement motif): DHKATGTKTKTGTD Alignment: HACAYAYACATRHD ------CACCTD-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 97 ryayAyAyrtGTRTrTry Original Motif Reverse Complement Forward 6 6 0.0321302 Consensus sequence (original motif): DHAYAYAYRTGTGTRTDH Consensus sequence (reverse complement motif): HDAMACACAKKTKTKTHD Alignment: HDAMACACAKKTKTKTHD -----CACCTD------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 96 yrTGTGCACAyr Reverse Complement Original Motif Forward 1 6 0.0342918 Consensus sequence (original motif): BVTGTGCACABV Consensus sequence (reverse complement motif): BBTGTGCACAVV Alignment: BVTGTGCACABV HAGGTG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 91 ssCGCCsCCrCCCss Original Motif Original Motif Forward 9 6 0.0456166 Consensus sequence (original motif): SSCGCCSCCGCCCSS Consensus sequence (reverse complement motif): SSGGGCGGSGGCGSS Alignment: SSCGCCSCCGCCCSS --------CACCTD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 4 Motif 4 Original Motif Original Motif Forward 2 6 0.0458702 Consensus sequence (original motif): CYBCCTCC Consensus sequence (reverse complement motif): GGAGGVMG Alignment: CYBCCTCC -CACCTD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 84 wsAGCTACwy Original Motif Reverse Complement Forward 4 6 0.0461351 Consensus sequence (original motif): DVAGCTACHB Consensus sequence (reverse complement motif): VHGTAGCTVD Alignment: VHGTAGCTVD ---CACCTD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 88 ssCrCYyYCGss Original Motif Original Motif Backward 5 6 0.0554152 Consensus sequence (original motif): BBCRCCYCCGBB Consensus sequence (reverse complement motif): BBCGGKGGMGBB Alignment: BBCRCCYCCGBB --CACCTD---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 90 ssCGsCwsCss Original Motif Original Motif Backward 1 6 0.0564656 Consensus sequence (original motif): BBCGSCWSCBB Consensus sequence (reverse complement motif): BBGSWGSCGBB Alignment: BBCGSCWSCBB -----CACCTD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 7 Motif name: Motif 7 Consensus sequence (original motif): ASASAGAA Consensus sequence (reverse complement motif): TTCTSTST *************************************************************** Best Matches for Top Significant Motif ID 7 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 92 tyTCTkTkTCyy Reverse Complement Original Motif Backward 4 8 0.00355249 Consensus sequence (original motif): BBTCTKTKTCHB Consensus sequence (reverse complement motif): VHGARAYAGAVV Alignment: BBTCTKTKTCHB -TTCTSTST--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 69 aaACAAAACaa Original Motif Original Motif Backward 4 8 0.0313478 Consensus sequence (original motif): AAACAAAACAA Consensus sequence (reverse complement motif): TTGTTTTGTTT Alignment: AAACAAAACAA ASASAGAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 82 rmACAGCAGsr Reverse Complement Reverse Complement Backward 1 8 0.0319191 Consensus sequence (original motif): VVACAGCAGVD Consensus sequence (reverse complement motif): DVCTGCTGTVB Alignment: DVCTGCTGTVB ---TTCTSTST ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 95 CACACACACACA Reverse Complement Reverse Complement Backward 4 8 0.0398795 Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG Alignment: TGTGTGTGTGTG -TTCTSTST--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 79 CACACACACACA Reverse Complement Reverse Complement Backward 4 8 0.0407034 Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG Alignment: TGTGTGTGTGTG -TTCTSTST--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 102 AAAAAAAAAAA Original Motif Original Motif Forward 1 8 0.0441956 Consensus sequence (original motif): AAAAAAAAAAA Consensus sequence (reverse complement motif): TTTTTTTTTTT Alignment: AAAAAAAAAAA ASASAGAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 26 Motif 26 Original Motif Reverse Complement Backward 5 8 0.0451851 Consensus sequence (original motif): TKKTTTGTTTTTTT Consensus sequence (reverse complement motif): AAAAAAACAAARRA Alignment: AAAAAAACAAARRA --ASASAGAA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 27 Motif 27 Reverse Complement Reverse Complement Backward 2 8 0.0493389 Consensus sequence (original motif): CAYACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTKTG Alignment: TGTGTGTGTGTKTG -----TTCTSTST- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 25 Motif 25 Original Motif Original Motif Forward 6 8 0.0494079 Consensus sequence (original motif): CACACAVRCACACA Consensus sequence (reverse complement motif): TGTGTGKVTGTGTG Alignment: CACACAVRCACACA -----ASASAGAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 48 EWSR1-FLI1 Reverse Complement Reverse Complement Backward 8 8 0.0559328 Consensus sequence (original motif): GGAAGGAAGGAAGGAAGG Consensus sequence (reverse complement motif): CCTTCCTTCCTTCCTTCC Alignment: CCTTCCTTCCTTCCTTCC ---TTCTSTST------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 21 Motif name: Motif 21 Consensus sequence (original motif): ATKTM Consensus sequence (reverse complement motif): RARAT *************************************************************** Best Matches for Top Significant Motif ID 21 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 15 Motif 15 Original Motif Reverse Complement Forward 2 5 0.0065927 Consensus sequence (original motif): GRAAATG Consensus sequence (reverse complement motif): CATTTKC Alignment: CATTTKC -ATKTM- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 10 Motif 10 Reverse Complement Original Motif Forward 2 5 0.0217628 Consensus sequence (original motif): TAMATA Consensus sequence (reverse complement motif): TATRTA Alignment: TAMATA -RARAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 85 wtATTTTTAww Reverse Complement Reverse Complement Forward 5 5 0.0314602 Consensus sequence (original motif): DHATTTTTADD Consensus sequence (reverse complement motif): DDTAAAAATHD Alignment: DDTAAAAATHD ----RARAT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 71 wyATTTTAww Reverse Complement Reverse Complement Backward 3 5 0.0314958 Consensus sequence (original motif): DHATTTTADD Consensus sequence (reverse complement motif): DDTAAAATHD Alignment: DDTAAAATHD ---RARAT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 92 tyTCTkTkTCyy Reverse Complement Reverse Complement Backward 6 5 0.0326182 Consensus sequence (original motif): BBTCTKTKTCHB Consensus sequence (reverse complement motif): VHGARAYAGAVV Alignment: VHGARAYAGAVV --RARAT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 74 twTACATAvw Original Motif Reverse Complement Forward 4 5 0.0335447 Consensus sequence (original motif): HHTACATAVD Consensus sequence (reverse complement motif): DBTATGTAHH Alignment: DBTATGTAHH ---ATKTM-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 83 wwTAAAwAww Original Motif Reverse Complement Forward 4 5 0.0514182 Consensus sequence (original motif): DDTAAAWAHH Consensus sequence (reverse complement motif): HHTWTTTADD Alignment: HHTWTTTADD ---ATKTM-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 76 wwWAAAAAwa Reverse Complement Original Motif Forward 5 5 0.0597589 Consensus sequence (original motif): WWAAAAAAWH Consensus sequence (reverse complement motif): HWTTTTTTWW Alignment: WWAAAAAAWH ----RARAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 101 AAAAAAAAAAA Original Motif Reverse Complement Forward 10 5 0.0609742 Consensus sequence (original motif): HVCATGCATGCABD Consensus sequence (reverse complement motif): DVTGCATGCATGBH Alignment: DVTGCATGCATGBH ---------ATKTM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 100 wrTGTATACAyw Original Motif Reverse Complement Forward 2 5 0.0620607 Consensus sequence (original motif): HDTGTATACAHD Consensus sequence (reverse complement motif): DHTGTATACADH Alignment: DHTGTATACADH -ATKTM------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 4 Motif name: Motif 4 Consensus sequence (original motif): CYBCCTCC Consensus sequence (reverse complement motif): GGAGGVMG *************************************************************** Best Matches for Top Significant Motif ID 4 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 48 EWSR1-FLI1 Reverse Complement Original Motif Backward 6 8 0.022644 Consensus sequence (original motif): GGAAGGAAGGAAGGAAGG Consensus sequence (reverse complement motif): CCTTCCTTCCTTCCTTCC Alignment: GGAAGGAAGGAAGGAAGG -----GGAGGVMG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 32 SP1 Original Motif Original Motif Forward 3 8 0.0247246 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: CCCCKCCCCC --CYBCCTCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 93 rrAGGGGGArr Original Motif Reverse Complement Backward 1 8 0.0300296 Consensus sequence (original motif): VVAGGGGGAVV Consensus sequence (reverse complement motif): VVTCCCCCTVV Alignment: VVTCCCCCTVV ---CYBCCTCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 91 ssCGCCsCCrCCCss Original Motif Original Motif Backward 4 8 0.0335629 Consensus sequence (original motif): SSCGCCSCCGCCCSS Consensus sequence (reverse complement motif): SSGGGCGGSGGCGSS Alignment: SSCGCCSCCGCCCSS ----CYBCCTCC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 52 Klf4 Original Motif Reverse Complement Backward 2 8 0.0354458 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: GCCYCMCCCD -CYBCCTCC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 88 ssCrCYyYCGss Original Motif Original Motif Backward 1 8 0.045829 Consensus sequence (original motif): BBCRCCYCCGBB Consensus sequence (reverse complement motif): BBCGGKGGMGBB Alignment: BBCRCCYCCGBB ----CYBCCTCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 ssCGsCTCss Original Motif Original Motif Backward 2 8 0.0472644 Consensus sequence (original motif): VVCGSCTCBB Consensus sequence (reverse complement motif): BBGAGSCGVV Alignment: VVCGSCTCBB -CYBCCTCC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 MZF1_5-13 Original Motif Reverse Complement Backward 1 8 0.049303 Consensus sequence (original motif): BKAGGGGDAD Consensus sequence (reverse complement motif): BTHCCCCTYB Alignment: BTHCCCCTYB --CYBCCTCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 RREB1 Reverse Complement Reverse Complement Forward 5 8 0.0528666 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: BGRRRGRGGRTGRTTYGGGG ----GGAGGVMG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 89 ccCCmCACCcc Original Motif Original Motif Backward 3 8 0.0549805 Consensus sequence (original motif): HBCCMCACCHH Consensus sequence (reverse complement motif): DDGGTGRGGBD Alignment: HBCCMCACCHH -CYBCCTCC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 2 Motif name: Motif 2 Consensus sequence (original motif): CACACACA Consensus sequence (reverse complement motif): TGTGTGTG *************************************************************** Best Matches for Top Significant Motif ID 2 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 79 CACACACACACA Original Motif Original Motif Forward 3 8 0.00486551 Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG Alignment: CACACACACACA --CACACACA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 95 CACACACACACA Reverse Complement Reverse Complement Forward 5 8 0.0100991 Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG Alignment: TGTGTGTGTGTG ----TGTGTGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 27 Motif 27 Reverse Complement Reverse Complement Forward 3 8 0.0101254 Consensus sequence (original motif): CAYACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTKTG Alignment: TGTGTGTGTGTKTG --TGTGTGTG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 25 Motif 25 Reverse Complement Reverse Complement Backward 7 8 0.0226631 Consensus sequence (original motif): CACACAVRCACACA Consensus sequence (reverse complement motif): TGTGTGKVTGTGTG Alignment: TGTGTGKVTGTGTG TGTGTGTG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 97 ryayAyAyrtGTRTrTry Reverse Complement Original Motif Forward 10 8 0.0393219 Consensus sequence (original motif): DHAYAYAYRTGTGTRTDH Consensus sequence (reverse complement motif): HDAMACACAKKTKTKTHD Alignment: DHAYAYAYRTGTGTRTDH ---------TGTGTGTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 75 yayAyAyACATrya Original Motif Original Motif Backward 5 8 0.0468047 Consensus sequence (original motif): HACAYAYACATRHD Consensus sequence (reverse complement motif): DHKATGTKTKTGTD Alignment: HACAYAYACATRHD --CACACACA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 86 aaCAAAAACaa Original Motif Original Motif Forward 3 8 0.0633924 Consensus sequence (original motif): HHCAAAAACAH Consensus sequence (reverse complement motif): HTGTTTTTGHH Alignment: HHCAAAAACAH --CACACACA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 74 twTACATAvw Reverse Complement Reverse Complement Forward 1 8 0.0691437 Consensus sequence (original motif): HHTACATAVD Consensus sequence (reverse complement motif): DBTATGTAHH Alignment: DBTATGTAHH TGTGTGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 RREB1 Original Motif Original Motif Backward 7 8 0.0752394 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: CCCCMAAMCAMCCMCMMMCV ------CACACACA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 101 AAAAAAAAAAA Reverse Complement Reverse Complement Backward 1 8 0.0764586 Consensus sequence (original motif): HVCATGCATGCABD Consensus sequence (reverse complement motif): DVTGCATGCATGBH Alignment: DVTGCATGCATGBH ------TGTGTGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 20 Motif name: Motif 20 Consensus sequence (original motif): CTCTGY Consensus sequence (reverse complement motif): KCAGAG *************************************************************** Best Matches for Top Significant Motif ID 20 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 ssGCTswGCCms Original Motif Original Motif Forward 4 6 0.0323407 Consensus sequence (original motif): VBGCTSAGCCHB Consensus sequence (reverse complement motif): BDGGCTSAGCBV Alignment: VBGCTSAGCCHB ---CTCTGY--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 7 Motif 7 Reverse Complement Original Motif Forward 3 6 0.0352938 Consensus sequence (original motif): ASASAGAA Consensus sequence (reverse complement motif): TTCTSTST Alignment: ASASAGAA --KCAGAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 NR1H2RXRA Reverse Complement Original Motif Forward 6 6 0.0398495 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC -----KCAGAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 36 PPARGRXRA Reverse Complement Original Motif Forward 6 6 0.0415907 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA -----KCAGAG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 11 Motif 11 Original Motif Original Motif Backward 2 6 0.0430865 Consensus sequence (original motif): CCGCCGCC Consensus sequence (reverse complement motif): GGCGGCGG Alignment: CCGCCGCC -CTCTGY- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 ssCKCwsCGss Original Motif Original Motif Forward 5 6 0.0439226 Consensus sequence (original motif): BVCGCWSCGBV Consensus sequence (reverse complement motif): VBCGSWGCGVB Alignment: BVCGCWSCGBV ----CTCTGY- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 38 NR2F1 Reverse Complement Reverse Complement Forward 5 6 0.0462597 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: AKGYYCAAAGRTCA ----KCAGAG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 92 tyTCTkTkTCyy Original Motif Original Motif Forward 2 6 0.0467436 Consensus sequence (original motif): BBTCTKTKTCHB Consensus sequence (reverse complement motif): VHGARAYAGAVV Alignment: BBTCTKTKTCHB -CTCTGY----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 50 HNF4A Reverse Complement Original Motif Forward 4 6 0.0481824 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: RGGBCAAAGKYCA ---KCAGAG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 MIZF Original Motif Original Motif Backward 1 6 0.049747 Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV Alignment: BAACGTCCGC ----CTCTGY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 42 Motif name: ArntAhr Consensus sequence (original motif): YGCGTG Consensus sequence (reverse complement motif): CACGCM *************************************************************** Best Matches for Top Significant Motif ID 42 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 27 Motif 27 Original Motif Reverse Complement Forward 7 6 0.0388571 Consensus sequence (original motif): CAYACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTKTG Alignment: TGTGTGTGTGTKTG ------YGCGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 79 CACACACACACA Original Motif Reverse Complement Backward 7 6 0.0420782 Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG Alignment: TGTGTGTGTGTG YGCGTG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 25 Motif 25 Reverse Complement Original Motif Forward 9 6 0.0430749 Consensus sequence (original motif): CACACAVRCACACA Consensus sequence (reverse complement motif): TGTGTGKVTGTGTG Alignment: CACACAVRCACACA --------CACGCM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 101 AAAAAAAAAAA Reverse Complement Original Motif Backward 7 6 0.043218 Consensus sequence (original motif): HVCATGCATGCABD Consensus sequence (reverse complement motif): DVTGCATGCATGBH Alignment: HVCATGCATGCABD --CACGCM------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 95 CACACACACACA Original Motif Reverse Complement Forward 5 6 0.0440329 Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG Alignment: TGTGTGTGTGTG ----YGCGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 96 yrTGTGCACAyr Original Motif Original Motif Backward 7 6 0.0477579 Consensus sequence (original motif): BVTGTGCACABV Consensus sequence (reverse complement motif): BBTGTGCACAVV Alignment: BVTGTGCACABV YGCGTG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 89 ccCCmCACCcc Reverse Complement Original Motif Backward 1 6 0.0479115 Consensus sequence (original motif): HBCCMCACCHH Consensus sequence (reverse complement motif): DDGGTGRGGBD Alignment: HBCCMCACCHH -----CACGCM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 65 ssCGrGCGss Reverse Complement Reverse Complement Backward 1 6 0.0487655 Consensus sequence (original motif): VSCGRGCGBV Consensus sequence (reverse complement motif): VBCGCMCGSV Alignment: VBCGCMCGSV ----CACGCM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 2 Motif 2 Reverse Complement Original Motif Forward 1 6 0.0505006 Consensus sequence (original motif): CACACACA Consensus sequence (reverse complement motif): TGTGTGTG Alignment: CACACACA CACGCM-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 ssGMsGRGCGss Reverse Complement Reverse Complement Backward 7 6 0.0538134 Consensus sequence (original motif): VVGCSGGGCGBB Consensus sequence (reverse complement motif): BBCGCCCSGCVV Alignment: BBCGCCCSGCVV CACGCM------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 13 Motif name: Motif 13 Consensus sequence (original motif): GAGRCAGR Consensus sequence (reverse complement motif): MCTGKCTC *************************************************************** Best Matches for Top Significant Motif ID 13 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 92 tyTCTkTkTCyy Original Motif Reverse Complement Forward 3 8 0.0131318 Consensus sequence (original motif): BBTCTKTKTCHB Consensus sequence (reverse complement motif): VHGARAYAGAVV Alignment: VHGARAYAGAVV --GAGRCAGR-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 ssCGsCTCss Original Motif Reverse Complement Forward 3 8 0.0334555 Consensus sequence (original motif): VVCGSCTCBB Consensus sequence (reverse complement motif): BBGAGSCGVV Alignment: BBGAGSCGVV --GAGRCAGR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 48 EWSR1-FLI1 Original Motif Original Motif Forward 7 8 0.0397014 Consensus sequence (original motif): GGAAGGAAGGAAGGAAGG Consensus sequence (reverse complement motif): CCTTCCTTCCTTCCTTCC Alignment: GGAAGGAAGGAAGGAAGG ------GAGRCAGR---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 99 sgCTGGCCAGcs Reverse Complement Reverse Complement Forward 2 8 0.0475948 Consensus sequence (original motif): BBCTGGCCAGVV Consensus sequence (reverse complement motif): VVCTGGCCAGBB Alignment: VVCTGGCCAGBB -MCTGKCTC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 REST Reverse Complement Reverse Complement Forward 4 8 0.049302 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA ---MCTGKCTC---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 23 Motif 23 Original Motif Reverse Complement Forward 1 8 0.0551203 Consensus sequence (original motif): CCCRCCCC Consensus sequence (reverse complement motif): GGGGMGGG Alignment: GGGGMGGG GAGRCAGR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 80 ssCwGGCCwGCss Reverse Complement Original Motif Forward 2 8 0.055328 Consensus sequence (original motif): BBCWGGCCAGCBB Consensus sequence (reverse complement motif): BBGCTGGCCWGBB Alignment: BBCWGGCCAGCBB -MCTGKCTC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 93 rrAGGGGGArr Original Motif Original Motif Backward 1 8 0.0555608 Consensus sequence (original motif): VVAGGGGGAVV Consensus sequence (reverse complement motif): VVTCCCCCTVV Alignment: VVAGGGGGAVV ---GAGRCAGR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 45 ESR1 Reverse Complement Original Motif Forward 13 8 0.055859 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY ------------MCTGKCTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 36 PPARGRXRA Reverse Complement Reverse Complement Backward 5 8 0.0596402 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: TGRCCTKTGHCCKAB ---MCTGKCTC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 14 Motif name: Motif 14 Consensus sequence (original motif): GCRCACRC Consensus sequence (reverse complement motif): GKGTGKGC *************************************************************** Best Matches for Top Significant Motif ID 14 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 27 Motif 27 Original Motif Original Motif Forward 4 8 0.0307099 Consensus sequence (original motif): CAYACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTKTG Alignment: CAYACACACACACA ---GCRCACRC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 79 CACACACACACA Original Motif Original Motif Backward 4 8 0.0357914 Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG Alignment: CACACACACACA -GCRCACRC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 95 CACACACACACA Original Motif Original Motif Forward 2 8 0.0366948 Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG Alignment: CACACACACACA -GCRCACRC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 52 Klf4 Reverse Complement Original Motif Backward 2 8 0.03983 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: DGGGYGKGGC -GKGTGKGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 25 Motif 25 Original Motif Original Motif Forward 6 8 0.0418776 Consensus sequence (original motif): CACACAVRCACACA Consensus sequence (reverse complement motif): TGTGTGKVTGTGTG Alignment: CACACAVRCACACA -----GCRCACRC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 44 Egr1 Reverse Complement Original Motif Forward 2 8 0.0429433 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: HGCGTGGGCGK -GKGTGKGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 89 ccCCmCACCcc Reverse Complement Reverse Complement Backward 3 8 0.0505252 Consensus sequence (original motif): HBCCMCACCHH Consensus sequence (reverse complement motif): DDGGTGRGGBD Alignment: DDGGTGRGGBD -GKGTGKGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 96 yrTGTGCACAyr Original Motif Original Motif Forward 4 8 0.0537384 Consensus sequence (original motif): BVTGTGCACABV Consensus sequence (reverse complement motif): BBTGTGCACAVV Alignment: BVTGTGCACABV ---GCRCACRC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 65 ssCGrGCGss Original Motif Reverse Complement Backward 2 8 0.067702 Consensus sequence (original motif): VSCGRGCGBV Consensus sequence (reverse complement motif): VBCGCMCGSV Alignment: VBCGCMCGSV -GCRCACRC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 91 ssCGCCsCCrCCCss Original Motif Original Motif Forward 4 8 0.0685867 Consensus sequence (original motif): SSCGCCSCCGCCCSS Consensus sequence (reverse complement motif): SSGGGCGGSGGCGSS Alignment: SSCGCCSCCGCCCSS ---GCRCACRC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- **************************************************************************************************************************************************************************************************** **************************************************************** Significant Motifs - Global and Local Matching (Highest to Lowest) **************************************************************** Dataset #: 3 Motif ID: 30 Motif name: ZEB1 Consensus sequence (original motif): CACCTD Consensus sequence (reverse complement motif): HAGGTG ************************************************************** Best Matches for Significant Motif ID 30 (Highest to Lowest) ************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 62 RORA_1 Original Motif Reverse Complement Backward 4 6 0.0141289 Consensus sequence (original motif): AWVDAGGTCA Consensus sequence (reverse complement motif): TGACCTDVWT Alignment: TGACCTDVWT -CACCTD--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 REST Reverse Complement Reverse Complement Backward 6 6 0.0143133 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA ----------HAGGTG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 89 ccCCmCACCcc Original Motif Original Motif Backward 1 6 0.0148347 Consensus sequence (original motif): HBCCMCACCHH Consensus sequence (reverse complement motif): DDGGTGRGGBD Alignment: HBCCMCACCHH -----CACCTD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 93 rrAGGGGGArr Reverse Complement Original Motif Backward 5 6 0.0194512 Consensus sequence (original motif): VVAGGGGGAVV Consensus sequence (reverse complement motif): VVTCCCCCTVV Alignment: VVAGGGGGAVV -HAGGTG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 41 Arnt Original Motif Reverse Complement Backward 1 6 0.0207244 Consensus sequence (original motif): CACGTG Consensus sequence (reverse complement motif): CACGTG Alignment: CACGTG CACCTD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 47 Esrrb Reverse Complement Original Motif Forward 1 6 0.0207244 Consensus sequence (original motif): CACGTG Consensus sequence (reverse complement motif): CACGTG Alignment: CACGTG HAGGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 NR1H2RXRA Original Motif Reverse Complement Backward 2 6 0.0232753 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: GTTGACCTTTGACCTTT ----------CACCTD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 49 HIF1AARNT Reverse Complement Original Motif Forward 2 6 0.0237889 Consensus sequence (original motif): VBACGTGV Consensus sequence (reverse complement motif): VCACGTBV Alignment: VBACGTGV -HAGGTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 51 INSM1 Reverse Complement Original Motif Forward 4 6 0.0262123 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: TGYCAGGGGGCR ---HAGGTG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 36 PPARGRXRA Original Motif Reverse Complement Backward 9 6 0.0264837 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: TGRCCTKTGHCCKAB -CACCTD-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 73 Motif name: ssCGsCTCss Consensus sequence (original motif): VVCGSCTCBB Consensus sequence (reverse complement motif): BBGAGSCGVV ************************************************************** Best Matches for Significant Motif ID 73 (Highest to Lowest) ************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 90 ssCGsCwsCss Reverse Complement Reverse Complement Forward 2 10 0 Consensus sequence (original motif): BBCGSCWSCBB Consensus sequence (reverse complement motif): BBGSWGSCGBB Alignment: BBGSWGSCGBB -BBGAGSCGVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 78 sssCGssGCsss Original Motif Original Motif Backward 2 10 0.0108856 Consensus sequence (original motif): SSSCGSSGCSSS Consensus sequence (reverse complement motif): SSSGCSSCGSSS Alignment: SSSCGSSGCSSS -VVCGSCTCBB- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 94 ssCGCksCGss Reverse Complement Original Motif Forward 2 10 0.0139257 Consensus sequence (original motif): VVCGCKSCGBB Consensus sequence (reverse complement motif): BBCGSRGCGVV Alignment: VVCGCKSCGBB -BBGAGSCGVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 87 ssCGGsYCGss Original Motif Original Motif Backward 2 10 0.0162661 Consensus sequence (original motif): BSCGGSCCGSV Consensus sequence (reverse complement motif): VSCGGSCCGSB Alignment: BSCGGSCCGSV VVCGSCTCBB- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 91 ssCGCCsCCrCCCss Original Motif Original Motif Backward 6 10 0.0236639 Consensus sequence (original motif): SSCGCCSCCGCCCSS Consensus sequence (reverse complement motif): SSGGGCGGSGGCGSS Alignment: SSCGCCSCCGCCCSS VVCGSCTCBB----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 66 ssCGssCGss Original Motif Original Motif Backward 1 10 0.0241432 Consensus sequence (original motif): BSCGSSCGSV Consensus sequence (reverse complement motif): VSCGSSCGSB Alignment: BSCGSSCGSV VVCGSCTCBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 65 ssCGrGCGss Original Motif Reverse Complement Forward 1 10 0.0252915 Consensus sequence (original motif): VSCGRGCGBV Consensus sequence (reverse complement motif): VBCGCMCGSV Alignment: VBCGCMCGSV VVCGSCTCBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 ssGMsGRGCGss Original Motif Reverse Complement Forward 3 10 0.0315402 Consensus sequence (original motif): VVGCSGGGCGBB Consensus sequence (reverse complement motif): BBCGCCCSGCVV Alignment: BBCGCCCSGCVV --VVCGSCTCBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 ssCKCwsCGss Original Motif Reverse Complement Forward 2 10 0.0340702 Consensus sequence (original motif): BVCGCWSCGBV Consensus sequence (reverse complement motif): VBCGSWGCGVB Alignment: VBCGSWGCGVB -VVCGSCTCBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 88 ssCrCYyYCGss Original Motif Original Motif Forward 1 10 0.0353522 Consensus sequence (original motif): BBCRCCYCCGBB Consensus sequence (reverse complement motif): BBCGGKGGMGBB Alignment: BBCRCCYCCGBB VVCGSCTCBB-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 68 Motif name: dwCTTTTCwy Consensus sequence (original motif): DHCTTTTCHH Consensus sequence (reverse complement motif): DHGAAAAGHD ************************************************************** Best Matches for Significant Motif ID 68 (Highest to Lowest) ************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 71 wyATTTTAww Reverse Complement Reverse Complement Backward 1 10 0.00508721 Consensus sequence (original motif): DHATTTTADD Consensus sequence (reverse complement motif): DDTAAAATHD Alignment: DDTAAAATHD DHGAAAAGHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 81 wwTAAwAAww Reverse Complement Original Motif Backward 1 10 0.0148156 Consensus sequence (original motif): DDTAAWAAHH Consensus sequence (reverse complement motif): HHTTWTTADD Alignment: DDTAAWAAHH DHGAAAAGHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 76 wwWAAAAAwa Reverse Complement Original Motif Backward 1 10 0.0152278 Consensus sequence (original motif): WWAAAAAAWH Consensus sequence (reverse complement motif): HWTTTTTTWW Alignment: WWAAAAAAWH DHGAAAAGHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 83 wwTAAAwAww Reverse Complement Original Motif Backward 1 10 0.0196583 Consensus sequence (original motif): DDTAAAWAHH Consensus sequence (reverse complement motif): HHTWTTTADD Alignment: DDTAAAWAHH DHGAAAAGHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 85 wtATTTTTAww Reverse Complement Reverse Complement Backward 2 10 0.0226988 Consensus sequence (original motif): DHATTTTTADD Consensus sequence (reverse complement motif): DDTAAAAATHD Alignment: DDTAAAAATHD DHGAAAAGHD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 REST Original Motif Reverse Complement Forward 10 10 0.0242678 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA ---------DHCTTTTCHH-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 86 aaCAAAAACaa Original Motif Reverse Complement Forward 2 10 0.0309896 Consensus sequence (original motif): HHCAAAAACAH Consensus sequence (reverse complement motif): HTGTTTTTGHH Alignment: HTGTTTTTGHH -DHCTTTTCHH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 69 aaACAAAACaa Original Motif Reverse Complement Forward 1 10 0.0311578 Consensus sequence (original motif): AAACAAAACAA Consensus sequence (reverse complement motif): TTGTTTTGTTT Alignment: TTGTTTTGTTT DHCTTTTCHH- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 50 HNF4A Reverse Complement Original Motif Backward 2 10 0.03324 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: RGGBCAAAGKYCA --DHGAAAAGHD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 92 tyTCTkTkTCyy Original Motif Original Motif Forward 2 10 0.0365489 Consensus sequence (original motif): BBTCTKTKTCHB Consensus sequence (reverse complement motif): VHGARAYAGAVV Alignment: BBTCTKTKTCHB -DHCTTTTCHH- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 18 Motif name: Motif 18 Consensus sequence (original motif): AMACA Consensus sequence (reverse complement motif): TGTRT ************************************************************** Best Matches for Significant Motif ID 18 (Highest to Lowest) ************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 2 Motif 2 Original Motif Original Motif Backward 1 5 0 Consensus sequence (original motif): CACACACA Consensus sequence (reverse complement motif): TGTGTGTG Alignment: CACACACA ---AMACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 79 CACACACACACA Original Motif Original Motif Backward 3 5 0.0148279 Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG Alignment: CACACACACACA -----AMACA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 27 Motif 27 Original Motif Original Motif Backward 5 5 0.0192752 Consensus sequence (original motif): CAYACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTKTG Alignment: CAYACACACACACA -----AMACA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 95 CACACACACACA Reverse Complement Reverse Complement Backward 4 5 0.0228414 Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG Alignment: TGTGTGTGTGTG ----TGTRT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 25 Motif 25 Reverse Complement Reverse Complement Backward 10 5 0.0233505 Consensus sequence (original motif): CACACAVRCACACA Consensus sequence (reverse complement motif): TGTGTGKVTGTGTG Alignment: TGTGTGKVTGTGTG TGTRT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 69 aaACAAAACaa Original Motif Original Motif Backward 2 5 0.0274014 Consensus sequence (original motif): AAACAAAACAA Consensus sequence (reverse complement motif): TTGTTTTGTTT Alignment: AAACAAAACAA -----AMACA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 86 aaCAAAAACaa Original Motif Original Motif Backward 2 5 0.0291354 Consensus sequence (original motif): HHCAAAAACAH Consensus sequence (reverse complement motif): HTGTTTTTGHH Alignment: HHCAAAAACAH -----AMACA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 97 ryayAyAyrtGTRTrTry Original Motif Reverse Complement Backward 10 5 0.0293401 Consensus sequence (original motif): DHAYAYAYRTGTGTRTDH Consensus sequence (reverse complement motif): HDAMACACAKKTKTKTHD Alignment: HDAMACACAKKTKTKTHD ----AMACA--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 100 wrTGTATACAyw Reverse Complement Original Motif Forward 3 5 0.0302831 Consensus sequence (original motif): HDTGTATACAHD Consensus sequence (reverse complement motif): DHTGTATACADH Alignment: HDTGTATACAHD --TGTRT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 5 Motif 5 Original Motif Original Motif Backward 3 5 0.0378142 Consensus sequence (original motif): AAAASAAA Consensus sequence (reverse complement motif): TTTSTTTT Alignment: AAAASAAA -AMACA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 71 Motif name: wyATTTTAww Consensus sequence (original motif): DHATTTTADD Consensus sequence (reverse complement motif): DDTAAAATHD ************************************************************** Best Matches for Significant Motif ID 71 (Highest to Lowest) ************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 85 wtATTTTTAww Original Motif Original Motif Forward 1 10 0 Consensus sequence (original motif): DHATTTTTADD Consensus sequence (reverse complement motif): DDTAAAAATHD Alignment: DHATTTTTADD DHATTTTADD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 81 wwTAAwAAww Reverse Complement Original Motif Forward 1 10 0.00285443 Consensus sequence (original motif): DDTAAWAAHH Consensus sequence (reverse complement motif): HHTTWTTADD Alignment: DDTAAWAAHH DDTAAAATHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 83 wwTAAAwAww Reverse Complement Original Motif Forward 1 10 0.00437246 Consensus sequence (original motif): DDTAAAWAHH Consensus sequence (reverse complement motif): HHTWTTTADD Alignment: DDTAAAWAHH DDTAAAATHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 76 wwWAAAAAwa Reverse Complement Original Motif Forward 1 10 0.0153432 Consensus sequence (original motif): WWAAAAAAWH Consensus sequence (reverse complement motif): HWTTTTTTWW Alignment: WWAAAAAAWH DDTAAAATHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 68 dwCTTTTCwy Reverse Complement Reverse Complement Backward 1 10 0.0177129 Consensus sequence (original motif): DHCTTTTCHH Consensus sequence (reverse complement motif): DHGAAAAGHD Alignment: DHGAAAAGHD DDTAAAATHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 104 wtTTWwAAAaw Original Motif Reverse Complement Backward 2 10 0.0302024 Consensus sequence (original motif): HHTTTWAAADD Consensus sequence (reverse complement motif): DDTTTWAAAHH Alignment: DDTTTWAAAHH DHATTTTADD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 74 twTACATAvw Original Motif Reverse Complement Forward 1 10 0.0367109 Consensus sequence (original motif): HHTACATAVD Consensus sequence (reverse complement motif): DBTATGTAHH Alignment: DBTATGTAHH DHATTTTADD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 86 aaCAAAAACaa Reverse Complement Original Motif Forward 1 10 0.0372694 Consensus sequence (original motif): HHCAAAAACAH Consensus sequence (reverse complement motif): HTGTTTTTGHH Alignment: HHCAAAAACAH DDTAAAATHD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 69 aaACAAAACaa Reverse Complement Original Motif Backward 2 10 0.0401253 Consensus sequence (original motif): AAACAAAACAA Consensus sequence (reverse complement motif): TTGTTTTGTTT Alignment: AAACAAAACAA DDTAAAATHD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 102 AAAAAAAAAAA Original Motif Reverse Complement Backward 1 10 0.0513368 Consensus sequence (original motif): AAAAAAAAAAA Consensus sequence (reverse complement motif): TTTTTTTTTTT Alignment: TTTTTTTTTTT -DHATTTTADD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 76 Motif name: wwWAAAAAwa Consensus sequence (original motif): WWAAAAAAWH Consensus sequence (reverse complement motif): HWTTTTTTWW ************************************************************** Best Matches for Significant Motif ID 76 (Highest to Lowest) ************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 85 wtATTTTTAww Reverse Complement Original Motif Backward 1 10 0.00795084 Consensus sequence (original motif): DHATTTTTADD Consensus sequence (reverse complement motif): DDTAAAAATHD Alignment: DHATTTTTADD -HWTTTTTTWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 81 wwTAAwAAww Original Motif Original Motif Forward 1 10 0.0105869 Consensus sequence (original motif): DDTAAWAAHH Consensus sequence (reverse complement motif): HHTTWTTADD Alignment: DDTAAWAAHH WWAAAAAAWH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 83 wwTAAAwAww Original Motif Original Motif Backward 1 10 0.0135165 Consensus sequence (original motif): DDTAAAWAHH Consensus sequence (reverse complement motif): HHTWTTTADD Alignment: DDTAAAWAHH WWAAAAAAWH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 102 AAAAAAAAAAA Reverse Complement Reverse Complement Forward 1 10 0.0137579 Consensus sequence (original motif): AAAAAAAAAAA Consensus sequence (reverse complement motif): TTTTTTTTTTT Alignment: TTTTTTTTTTT HWTTTTTTWW- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 86 aaCAAAAACaa Original Motif Original Motif Backward 2 10 0.0272712 Consensus sequence (original motif): HHCAAAAACAH Consensus sequence (reverse complement motif): HTGTTTTTGHH Alignment: HHCAAAAACAH WWAAAAAAWH- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 71 wyATTTTAww Reverse Complement Original Motif Forward 1 10 0.0288034 Consensus sequence (original motif): DHATTTTADD Consensus sequence (reverse complement motif): DDTAAAATHD Alignment: DHATTTTADD HWTTTTTTWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 69 aaACAAAACaa Original Motif Original Motif Forward 1 10 0.0387825 Consensus sequence (original motif): AAACAAAACAA Consensus sequence (reverse complement motif): TTGTTTTGTTT Alignment: AAACAAAACAA WWAAAAAAWH- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 104 wtTTWwAAAaw Original Motif Original Motif Backward 1 10 0.0395975 Consensus sequence (original motif): HHTTTWAAADD Consensus sequence (reverse complement motif): DDTTTWAAAHH Alignment: HHTTTWAAADD -WWAAAAAAWH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 68 dwCTTTTCwy Reverse Complement Original Motif Backward 1 10 0.0413137 Consensus sequence (original motif): DHCTTTTCHH Consensus sequence (reverse complement motif): DHGAAAAGHD Alignment: DHCTTTTCHH HWTTTTTTWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 26 Motif 26 Original Motif Reverse Complement Forward 1 10 0.0498611 Consensus sequence (original motif): TKKTTTGTTTTTTT Consensus sequence (reverse complement motif): AAAAAAACAAARRA Alignment: AAAAAAACAAARRA WWAAAAAAWH---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 83 Motif name: wwTAAAwAww Consensus sequence (original motif): DDTAAAWAHH Consensus sequence (reverse complement motif): HHTWTTTADD ************************************************************** Best Matches for Significant Motif ID 83 (Highest to Lowest) ************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 81 wwTAAwAAww Original Motif Original Motif Backward 1 10 0 Consensus sequence (original motif): DDTAAWAAHH Consensus sequence (reverse complement motif): HHTTWTTADD Alignment: DDTAAWAAHH DDTAAAWAHH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 85 wtATTTTTAww Original Motif Reverse Complement Forward 1 10 0.00769202 Consensus sequence (original motif): DHATTTTTADD Consensus sequence (reverse complement motif): DDTAAAAATHD Alignment: DDTAAAAATHD DDTAAAWAHH- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 76 wwWAAAAAwa Original Motif Original Motif Backward 1 10 0.0148593 Consensus sequence (original motif): WWAAAAAAWH Consensus sequence (reverse complement motif): HWTTTTTTWW Alignment: WWAAAAAAWH DDTAAAWAHH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 74 twTACATAvw Reverse Complement Reverse Complement Backward 1 10 0.0155512 Consensus sequence (original motif): HHTACATAVD Consensus sequence (reverse complement motif): DBTATGTAHH Alignment: DBTATGTAHH HHTWTTTADD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 71 wyATTTTAww Reverse Complement Original Motif Forward 1 10 0.0191754 Consensus sequence (original motif): DHATTTTADD Consensus sequence (reverse complement motif): DDTAAAATHD Alignment: DHATTTTADD HHTWTTTADD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 86 aaCAAAAACaa Original Motif Original Motif Forward 1 10 0.0386588 Consensus sequence (original motif): HHCAAAAACAH Consensus sequence (reverse complement motif): HTGTTTTTGHH Alignment: HHCAAAAACAH DDTAAAWAHH- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 104 wtTTWwAAAaw Original Motif Original Motif Forward 2 10 0.0400542 Consensus sequence (original motif): HHTTTWAAADD Consensus sequence (reverse complement motif): DDTTTWAAAHH Alignment: HHTTTWAAADD -DDTAAAWAHH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 98 wwTAATTAATTAww Reverse Complement Reverse Complement Backward 5 10 0.0425216 Consensus sequence (original motif): HDTAATTAATTAHD Consensus sequence (reverse complement motif): DHTAATTAATTADH Alignment: DHTAATTAATTADH HHTWTTTADD---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 68 dwCTTTTCwy Reverse Complement Original Motif Backward 1 10 0.0470869 Consensus sequence (original motif): DHCTTTTCHH Consensus sequence (reverse complement motif): DHGAAAAGHD Alignment: DHCTTTTCHH HHTWTTTADD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 102 AAAAAAAAAAA Original Motif Original Motif Forward 1 10 0.0497246 Consensus sequence (original motif): AAAAAAAAAAA Consensus sequence (reverse complement motif): TTTTTTTTTTT Alignment: AAAAAAAAAAA DDTAAAWAHH- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 81 Motif name: wwTAAwAAww Consensus sequence (original motif): DDTAAWAAHH Consensus sequence (reverse complement motif): HHTTWTTADD ************************************************************** Best Matches for Significant Motif ID 81 (Highest to Lowest) ************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 83 wwTAAAwAww Original Motif Original Motif Backward 1 10 0 Consensus sequence (original motif): DDTAAAWAHH Consensus sequence (reverse complement motif): HHTWTTTADD Alignment: DDTAAAWAHH DDTAAWAAHH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 85 wtATTTTTAww Reverse Complement Original Motif Backward 1 10 0.00383605 Consensus sequence (original motif): DHATTTTTADD Consensus sequence (reverse complement motif): DDTAAAAATHD Alignment: DHATTTTTADD -HHTTWTTADD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 76 wwWAAAAAwa Original Motif Original Motif Backward 1 10 0.0119297 Consensus sequence (original motif): WWAAAAAAWH Consensus sequence (reverse complement motif): HWTTTTTTWW Alignment: WWAAAAAAWH DDTAAWAAHH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 71 wyATTTTAww Reverse Complement Original Motif Forward 1 10 0.0176574 Consensus sequence (original motif): DHATTTTADD Consensus sequence (reverse complement motif): DDTAAAATHD Alignment: DHATTTTADD HHTTWTTADD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 104 wtTTWwAAAaw Original Motif Original Motif Backward 1 10 0.0376356 Consensus sequence (original motif): HHTTTWAAADD Consensus sequence (reverse complement motif): DDTTTWAAAHH Alignment: HHTTTWAAADD -DDTAAWAAHH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 86 aaCAAAAACaa Original Motif Original Motif Forward 1 10 0.0380114 Consensus sequence (original motif): HHCAAAAACAH Consensus sequence (reverse complement motif): HTGTTTTTGHH Alignment: HHCAAAAACAH DDTAAWAAHH- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 68 dwCTTTTCwy Reverse Complement Original Motif Backward 1 10 0.0422443 Consensus sequence (original motif): DHCTTTTCHH Consensus sequence (reverse complement motif): DHGAAAAGHD Alignment: DHCTTTTCHH HHTTWTTADD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 74 twTACATAvw Reverse Complement Reverse Complement Backward 1 10 0.0437545 Consensus sequence (original motif): HHTACATAVD Consensus sequence (reverse complement motif): DBTATGTAHH Alignment: DBTATGTAHH HHTTWTTADD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 98 wwTAATTAATTAww Reverse Complement Reverse Complement Backward 5 10 0.0451418 Consensus sequence (original motif): HDTAATTAATTAHD Consensus sequence (reverse complement motif): DHTAATTAATTADH Alignment: DHTAATTAATTADH HHTTWTTADD---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 102 AAAAAAAAAAA Reverse Complement Reverse Complement Backward 1 10 0.0493427 Consensus sequence (original motif): AAAAAAAAAAA Consensus sequence (reverse complement motif): TTTTTTTTTTT Alignment: TTTTTTTTTTT -HHTTWTTADD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 90 Motif name: ssCGsCwsCss Consensus sequence (original motif): BBCGSCWSCBB Consensus sequence (reverse complement motif): BBGSWGSCGBB ************************************************************** Best Matches for Significant Motif ID 90 (Highest to Lowest) ************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 88 ssCrCYyYCGss Original Motif Original Motif Backward 2 11 0.0236246 Consensus sequence (original motif): BBCRCCYCCGBB Consensus sequence (reverse complement motif): BBCGGKGGMGBB Alignment: BBCRCCYCCGBB BBCGSCWSCBB- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 89 ccCCmCACCcc Original Motif Original Motif Backward 1 11 0.0238413 Consensus sequence (original motif): HBCCMCACCHH Consensus sequence (reverse complement motif): DDGGTGRGGBD Alignment: HBCCMCACCHH BBCGSCWSCBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 78 sssCGssGCsss Original Motif Original Motif Forward 2 11 0.0239515 Consensus sequence (original motif): SSSCGSSGCSSS Consensus sequence (reverse complement motif): SSSGCSSCGSSS Alignment: SSSCGSSGCSSS -BBCGSCWSCBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 91 ssCGCCsCCrCCCss Reverse Complement Reverse Complement Backward 1 11 0.0274779 Consensus sequence (original motif): SSCGCCSCCGCCCSS Consensus sequence (reverse complement motif): SSGGGCGGSGGCGSS Alignment: SSGGGCGGSGGCGSS ----BBGSWGSCGBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 82 rmACAGCAGsr Original Motif Reverse Complement Forward 1 11 0.0336118 Consensus sequence (original motif): VVACAGCAGVD Consensus sequence (reverse complement motif): DVCTGCTGTVB Alignment: DVCTGCTGTVB BBCGSCWSCBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 94 ssCGCksCGss Reverse Complement Original Motif Backward 1 11 0.0337912 Consensus sequence (original motif): VVCGCKSCGBB Consensus sequence (reverse complement motif): BBCGSRGCGVV Alignment: VVCGCKSCGBB BBGSWGSCGBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 87 ssCGGsYCGss Original Motif Original Motif Forward 1 11 0.0346171 Consensus sequence (original motif): BSCGGSCCGSV Consensus sequence (reverse complement motif): VSCGGSCCGSB Alignment: BSCGGSCCGSV BBCGSCWSCBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 80 ssCwGGCCwGCss Reverse Complement Reverse Complement Backward 3 11 0.0353683 Consensus sequence (original motif): BBCWGGCCAGCBB Consensus sequence (reverse complement motif): BBGCTGGCCWGBB Alignment: BBGCTGGCCWGBB BBGSWGSCGBB-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 ssGMsGRGCGss Original Motif Reverse Complement Forward 2 11 0.0362688 Consensus sequence (original motif): VVGCSGGGCGBB Consensus sequence (reverse complement motif): BBCGCCCSGCVV Alignment: BBCGCCCSGCVV -BBCGSCWSCBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 ssCKCwsCGss Original Motif Reverse Complement Forward 1 11 0.0409983 Consensus sequence (original motif): BVCGCWSCGBV Consensus sequence (reverse complement motif): VBCGSWGCGVB Alignment: VBCGSWGCGVB BBCGSCWSCBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 86 Motif name: aaCAAAAACaa Consensus sequence (original motif): HHCAAAAACAH Consensus sequence (reverse complement motif): HTGTTTTTGHH ************************************************************** Best Matches for Significant Motif ID 86 (Highest to Lowest) ************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 69 aaACAAAACaa Reverse Complement Reverse Complement Backward 1 11 0.00599723 Consensus sequence (original motif): AAACAAAACAA Consensus sequence (reverse complement motif): TTGTTTTGTTT Alignment: TTGTTTTGTTT HTGTTTTTGHH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 85 wtATTTTTAww Reverse Complement Original Motif Backward 1 11 0.0144021 Consensus sequence (original motif): DHATTTTTADD Consensus sequence (reverse complement motif): DDTAAAAATHD Alignment: DHATTTTTADD HTGTTTTTGHH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 102 AAAAAAAAAAA Reverse Complement Reverse Complement Backward 1 11 0.0192906 Consensus sequence (original motif): AAAAAAAAAAA Consensus sequence (reverse complement motif): TTTTTTTTTTT Alignment: TTTTTTTTTTT HTGTTTTTGHH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 75 yayAyAyACATrya Reverse Complement Reverse Complement Forward 4 11 0.0258087 Consensus sequence (original motif): HACAYAYACATRHD Consensus sequence (reverse complement motif): DHKATGTKTKTGTD Alignment: DHKATGTKTKTGTD ---HTGTTTTTGHH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 79 CACACACACACA Reverse Complement Reverse Complement Forward 2 11 0.0409728 Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG Alignment: TGTGTGTGTGTG -HTGTTTTTGHH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 92 tyTCTkTkTCyy Reverse Complement Original Motif Forward 2 11 0.0416867 Consensus sequence (original motif): BBTCTKTKTCHB Consensus sequence (reverse complement motif): VHGARAYAGAVV Alignment: BBTCTKTKTCHB -HTGTTTTTGHH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 95 CACACACACACA Reverse Complement Reverse Complement Forward 2 11 0.0421933 Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG Alignment: TGTGTGTGTGTG -HTGTTTTTGHH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 27 Motif 27 Reverse Complement Reverse Complement Forward 2 11 0.0439692 Consensus sequence (original motif): CAYACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTKTG Alignment: TGTGTGTGTGTKTG -HTGTTTTTGHH-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 RREB1 Original Motif Original Motif Backward 4 11 0.0504266 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: CCCCMAAMCAMCCMCMMMCV ------HHCAAAAACAH--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 26 Motif 26 Original Motif Reverse Complement Backward 4 11 0.0546799 Consensus sequence (original motif): TKKTTTGTTTTTTT Consensus sequence (reverse complement motif): AAAAAAACAAARRA Alignment: AAAAAAACAAARRA HHCAAAAACAH--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- **************************************************************************************************************************************************************************************************** ********************************************************************** Best Matches for Each Motif (Highest to Lowest) ***************************************************************************** Dataset #: 1 Motif ID: 1 Motif name: Motif 1 Consensus sequence (original motif): AAAAWAAA Consensus sequence (reverse complement motif): TTTWTTTT ************************************************************************ Best Matches for Motif ID 1 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 102 AAAAAAAAAAA Original Motif Original Motif Backward 2 8 0 Consensus sequence (original motif): AAAAAAAAAAA Consensus sequence (reverse complement motif): TTTTTTTTTTT Alignment: AAAAAAAAAAA --AAAAWAAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 5 Motif 5 Original Motif Original Motif Backward 1 8 0.0225461 Consensus sequence (original motif): AAAASAAA Consensus sequence (reverse complement motif): TTTSTTTT Alignment: AAAASAAA AAAAWAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 76 wwWAAAAAwa Reverse Complement Reverse Complement Forward 2 8 0.0315844 Consensus sequence (original motif): WWAAAAAAWH Consensus sequence (reverse complement motif): HWTTTTTTWW Alignment: HWTTTTTTWW -TTTWTTTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 26 Motif 26 Reverse Complement Original Motif Backward 4 8 0.0405545 Consensus sequence (original motif): TKKTTTGTTTTTTT Consensus sequence (reverse complement motif): AAAAAAACAAARRA Alignment: TKKTTTGTTTTTTT ---TTTWTTTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 81 wwTAAwAAww Original Motif Original Motif Forward 2 8 0.0501043 Consensus sequence (original motif): DDTAAWAAHH Consensus sequence (reverse complement motif): HHTTWTTADD Alignment: DDTAAWAAHH -AAAAWAAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 86 aaCAAAAACaa Original Motif Original Motif Backward 1 8 0.0508706 Consensus sequence (original motif): HHCAAAAACAH Consensus sequence (reverse complement motif): HTGTTTTTGHH Alignment: HHCAAAAACAH ---AAAAWAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 83 wwTAAAwAww Reverse Complement Reverse Complement Forward 1 8 0.0533374 Consensus sequence (original motif): DDTAAAWAHH Consensus sequence (reverse complement motif): HHTWTTTADD Alignment: HHTWTTTADD TTTWTTTT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 85 wtATTTTTAww Reverse Complement Original Motif Forward 1 8 0.0555652 Consensus sequence (original motif): DHATTTTTADD Consensus sequence (reverse complement motif): DDTAAAAATHD Alignment: DHATTTTTADD TTTWTTTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 69 aaACAAAACaa Reverse Complement Reverse Complement Forward 4 8 0.0594787 Consensus sequence (original motif): AAACAAAACAA Consensus sequence (reverse complement motif): TTGTTTTGTTT Alignment: TTGTTTTGTTT ---TTTWTTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 92 tyTCTkTkTCyy Reverse Complement Original Motif Backward 4 8 0.0715604 Consensus sequence (original motif): BBTCTKTKTCHB Consensus sequence (reverse complement motif): VHGARAYAGAVV Alignment: BBTCTKTKTCHB -TTTWTTTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 75 yayAyAyACATrya Reverse Complement Reverse Complement Forward 7 8 0.0815577 Consensus sequence (original motif): HACAYAYACATRHD Consensus sequence (reverse complement motif): DHKATGTKTKTGTD Alignment: DHKATGTKTKTGTD ------TTTWTTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 2 Motif name: Motif 2 Consensus sequence (original motif): CACACACA Consensus sequence (reverse complement motif): TGTGTGTG ************************************************************************ Best Matches for Motif ID 2 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 79 CACACACACACA Original Motif Original Motif Forward 3 8 0.00486551 Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG Alignment: CACACACACACA --CACACACA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 95 CACACACACACA Original Motif Original Motif Backward 5 8 0.0100991 Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG Alignment: CACACACACACA CACACACA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 27 Motif 27 Reverse Complement Reverse Complement Forward 3 8 0.0101254 Consensus sequence (original motif): CAYACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTKTG Alignment: TGTGTGTGTGTKTG --TGTGTGTG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 25 Motif 25 Reverse Complement Reverse Complement Backward 7 8 0.0226631 Consensus sequence (original motif): CACACAVRCACACA Consensus sequence (reverse complement motif): TGTGTGKVTGTGTG Alignment: TGTGTGKVTGTGTG TGTGTGTG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 97 ryayAyAyrtGTRTrTry Reverse Complement Original Motif Backward 2 8 0.0393219 Consensus sequence (original motif): DHAYAYAYRTGTGTRTDH Consensus sequence (reverse complement motif): HDAMACACAKKTKTKTHD Alignment: DHAYAYAYRTGTGTRTDH ---------TGTGTGTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 75 yayAyAyACATrya Original Motif Original Motif Backward 5 8 0.0468047 Consensus sequence (original motif): HACAYAYACATRHD Consensus sequence (reverse complement motif): DHKATGTKTKTGTD Alignment: HACAYAYACATRHD --CACACACA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 86 aaCAAAAACaa Original Motif Original Motif Forward 3 8 0.0633924 Consensus sequence (original motif): HHCAAAAACAH Consensus sequence (reverse complement motif): HTGTTTTTGHH Alignment: HHCAAAAACAH --CACACACA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 74 twTACATAvw Reverse Complement Reverse Complement Backward 3 8 0.0691437 Consensus sequence (original motif): HHTACATAVD Consensus sequence (reverse complement motif): DBTATGTAHH Alignment: DBTATGTAHH TGTGTGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 RREB1 Original Motif Original Motif Backward 7 8 0.0752394 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: CCCCMAAMCAMCCMCMMMCV ------CACACACA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 101 AAAAAAAAAAA Reverse Complement Reverse Complement Forward 7 8 0.0764586 Consensus sequence (original motif): HVCATGCATGCABD Consensus sequence (reverse complement motif): DVTGCATGCATGBH Alignment: DVTGCATGCATGBH ------TGTGTGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 3 Motif name: Motif 3 Consensus sequence (original motif): AWATAMA Consensus sequence (reverse complement motif): TYTATWT ************************************************************************ Best Matches for Motif ID 3 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 83 wwTAAAwAww Reverse Complement Reverse Complement Forward 1 7 0.0482178 Consensus sequence (original motif): DDTAAAWAHH Consensus sequence (reverse complement motif): HHTWTTTADD Alignment: HHTWTTTADD TYTATWT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 1 Motif 1 Original Motif Original Motif Backward 1 7 0.0549847 Consensus sequence (original motif): AAAAWAAA Consensus sequence (reverse complement motif): TTTWTTTT Alignment: AAAAWAAA -AWATAMA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 74 twTACATAvw Reverse Complement Reverse Complement Forward 1 7 0.0576662 Consensus sequence (original motif): HHTACATAVD Consensus sequence (reverse complement motif): DBTATGTAHH Alignment: DBTATGTAHH TYTATWT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 5 Motif 5 Original Motif Original Motif Forward 2 7 0.0581758 Consensus sequence (original motif): AAAASAAA Consensus sequence (reverse complement motif): TTTSTTTT Alignment: AAAASAAA -AWATAMA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 102 AAAAAAAAAAA Reverse Complement Reverse Complement Backward 3 7 0.0581792 Consensus sequence (original motif): AAAAAAAAAAA Consensus sequence (reverse complement motif): TTTTTTTTTTT Alignment: TTTTTTTTTTT --TYTATWT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 92 tyTCTkTkTCyy Original Motif Reverse Complement Forward 4 7 0.061865 Consensus sequence (original motif): BBTCTKTKTCHB Consensus sequence (reverse complement motif): VHGARAYAGAVV Alignment: VHGARAYAGAVV ---AWATAMA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 76 wwWAAAAAwa Reverse Complement Reverse Complement Backward 4 7 0.0673905 Consensus sequence (original motif): WWAAAAAAWH Consensus sequence (reverse complement motif): HWTTTTTTWW Alignment: HWTTTTTTWW TYTATWT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 69 aaACAAAACaa Reverse Complement Reverse Complement Forward 5 7 0.0713162 Consensus sequence (original motif): AAACAAAACAA Consensus sequence (reverse complement motif): TTGTTTTGTTT Alignment: TTGTTTTGTTT ----TYTATWT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 26 Motif 26 Original Motif Reverse Complement Forward 3 7 0.0754383 Consensus sequence (original motif): TKKTTTGTTTTTTT Consensus sequence (reverse complement motif): AAAAAAACAAARRA Alignment: AAAAAAACAAARRA --AWATAMA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 95 CACACACACACA Original Motif Original Motif Backward 3 7 0.0767049 Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG Alignment: CACACACACACA ---AWATAMA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 4 Motif name: Motif 4 Consensus sequence (original motif): CYBCCTCC Consensus sequence (reverse complement motif): GGAGGVMG ************************************************************************ Best Matches for Motif ID 4 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 48 EWSR1-FLI1 Reverse Complement Original Motif Backward 6 8 0.022644 Consensus sequence (original motif): GGAAGGAAGGAAGGAAGG Consensus sequence (reverse complement motif): CCTTCCTTCCTTCCTTCC Alignment: GGAAGGAAGGAAGGAAGG -----GGAGGVMG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 32 SP1 Original Motif Original Motif Backward 1 8 0.0247246 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: CCCCKCCCCC --CYBCCTCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 93 rrAGGGGGArr Original Motif Reverse Complement Backward 1 8 0.0300296 Consensus sequence (original motif): VVAGGGGGAVV Consensus sequence (reverse complement motif): VVTCCCCCTVV Alignment: VVTCCCCCTVV ---CYBCCTCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 91 ssCGCCsCCrCCCss Original Motif Original Motif Forward 5 8 0.0335629 Consensus sequence (original motif): SSCGCCSCCGCCCSS Consensus sequence (reverse complement motif): SSGGGCGGSGGCGSS Alignment: SSCGCCSCCGCCCSS ----CYBCCTCC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 52 Klf4 Original Motif Reverse Complement Backward 2 8 0.0354458 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: GCCYCMCCCD -CYBCCTCC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 11 Motif 11 Original Motif Original Motif Backward 1 8 0.0389582 Consensus sequence (original motif): CCGCCGCC Consensus sequence (reverse complement motif): GGCGGCGG Alignment: CCGCCGCC CYBCCTCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 88 ssCrCYyYCGss Original Motif Original Motif Backward 1 8 0.045829 Consensus sequence (original motif): BBCRCCYCCGBB Consensus sequence (reverse complement motif): BBCGGKGGMGBB Alignment: BBCRCCYCCGBB ----CYBCCTCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 ssCGsCTCss Original Motif Original Motif Backward 2 8 0.0472644 Consensus sequence (original motif): VVCGSCTCBB Consensus sequence (reverse complement motif): BBGAGSCGVV Alignment: VVCGSCTCBB -CYBCCTCC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 MZF1_5-13 Original Motif Reverse Complement Backward 1 8 0.049303 Consensus sequence (original motif): BKAGGGGDAD Consensus sequence (reverse complement motif): BTHCCCCTYB Alignment: BTHCCCCTYB --CYBCCTCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 RREB1 Reverse Complement Reverse Complement Forward 5 8 0.0528666 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: BGRRRGRGGRTGRTTYGGGG ----GGAGGVMG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 5 Motif name: Motif 5 Consensus sequence (original motif): AAAASAAA Consensus sequence (reverse complement motif): TTTSTTTT ************************************************************************ Best Matches for Motif ID 5 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 102 AAAAAAAAAAA Original Motif Original Motif Forward 2 8 0.0150663 Consensus sequence (original motif): AAAAAAAAAAA Consensus sequence (reverse complement motif): TTTTTTTTTTT Alignment: AAAAAAAAAAA -AAAASAAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 1 Motif 1 Reverse Complement Reverse Complement Forward 1 8 0.0155771 Consensus sequence (original motif): AAAAWAAA Consensus sequence (reverse complement motif): TTTWTTTT Alignment: TTTWTTTT TTTSTTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 26 Motif 26 Original Motif Reverse Complement Backward 4 8 0.020143 Consensus sequence (original motif): TKKTTTGTTTTTTT Consensus sequence (reverse complement motif): AAAAAAACAAARRA Alignment: AAAAAAACAAARRA ---AAAASAAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 76 wwWAAAAAwa Original Motif Original Motif Backward 1 8 0.0517621 Consensus sequence (original motif): WWAAAAAAWH Consensus sequence (reverse complement motif): HWTTTTTTWW Alignment: WWAAAAAAWH --AAAASAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 69 aaACAAAACaa Original Motif Original Motif Forward 1 8 0.0633085 Consensus sequence (original motif): AAACAAAACAA Consensus sequence (reverse complement motif): TTGTTTTGTTT Alignment: AAACAAAACAA AAAASAAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 92 tyTCTkTkTCyy Reverse Complement Original Motif Backward 5 8 0.0636153 Consensus sequence (original motif): BBTCTKTKTCHB Consensus sequence (reverse complement motif): VHGARAYAGAVV Alignment: BBTCTKTKTCHB TTTSTTTT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 86 aaCAAAAACaa Original Motif Original Motif Forward 4 8 0.0687134 Consensus sequence (original motif): HHCAAAAACAH Consensus sequence (reverse complement motif): HTGTTTTTGHH Alignment: HHCAAAAACAH ---AAAASAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 2 Motif 2 Original Motif Original Motif Forward 1 8 0.0740862 Consensus sequence (original motif): CACACACA Consensus sequence (reverse complement motif): TGTGTGTG Alignment: CACACACA AAAASAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 85 wtATTTTTAww Reverse Complement Original Motif Forward 1 8 0.0762618 Consensus sequence (original motif): DHATTTTTADD Consensus sequence (reverse complement motif): DDTAAAAATHD Alignment: DHATTTTTADD TTTSTTTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 27 Motif 27 Reverse Complement Reverse Complement Forward 7 8 0.0769612 Consensus sequence (original motif): CAYACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTKTG Alignment: TGTGTGTGTGTKTG ------TTTSTTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 6 Motif name: Motif 6 Consensus sequence (original motif): CCCCRCCC Consensus sequence (reverse complement motif): GGGKGGGG ************************************************************************ Best Matches for Motif ID 6 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 52 Klf4 Original Motif Reverse Complement Backward 2 8 0.0404318 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: GCCYCMCCCD -CCCCRCCC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 89 ccCCmCACCcc Original Motif Original Motif Forward 3 8 0.0418011 Consensus sequence (original motif): HBCCMCACCHH Consensus sequence (reverse complement motif): DDGGTGRGGBD Alignment: HBCCMCACCHH --CCCCRCCC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 23 Motif 23 Reverse Complement Reverse Complement Backward 1 8 0.0476511 Consensus sequence (original motif): CCCRCCCC Consensus sequence (reverse complement motif): GGGGMGGG Alignment: GGGGMGGG GGGKGGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 32 SP1 Reverse Complement Reverse Complement Backward 1 8 0.0491071 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: GGGGGYGGGG --GGGKGGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 91 ssCGCCsCCrCCCss Original Motif Original Motif Forward 6 8 0.0491249 Consensus sequence (original motif): SSCGCCSCCGCCCSS Consensus sequence (reverse complement motif): SSGGGCGGSGGCGSS Alignment: SSCGCCSCCGCCCSS -----CCCCRCCC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 11 Motif 11 Reverse Complement Reverse Complement Forward 1 8 0.0723432 Consensus sequence (original motif): CCGCCGCC Consensus sequence (reverse complement motif): GGCGGCGG Alignment: GGCGGCGG GGGKGGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 ssGMsGRGCGss Original Motif Reverse Complement Forward 5 8 0.0784423 Consensus sequence (original motif): VVGCSGGGCGBB Consensus sequence (reverse complement motif): BBCGCCCSGCVV Alignment: BBCGCCCSGCVV ----CCCCRCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 51 INSM1 Original Motif Reverse Complement Backward 2 8 0.0794271 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: MGCCCCCTGMCA ---CCCCRCCC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 14 Motif 14 Reverse Complement Reverse Complement Backward 1 8 0.0808211 Consensus sequence (original motif): GCRCACRC Consensus sequence (reverse complement motif): GKGTGKGC Alignment: GKGTGKGC GGGKGGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 88 ssCrCYyYCGss Reverse Complement Reverse Complement Forward 4 8 0.0819499 Consensus sequence (original motif): BBCRCCYCCGBB Consensus sequence (reverse complement motif): BBCGGKGGMGBB Alignment: BBCGGKGGMGBB ---GGGKGGGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 7 Motif name: Motif 7 Consensus sequence (original motif): ASASAGAA Consensus sequence (reverse complement motif): TTCTSTST ************************************************************************ Best Matches for Motif ID 7 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 92 tyTCTkTkTCyy Reverse Complement Original Motif Backward 4 8 0.00355249 Consensus sequence (original motif): BBTCTKTKTCHB Consensus sequence (reverse complement motif): VHGARAYAGAVV Alignment: BBTCTKTKTCHB -TTCTSTST--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 69 aaACAAAACaa Original Motif Original Motif Backward 4 8 0.0313478 Consensus sequence (original motif): AAACAAAACAA Consensus sequence (reverse complement motif): TTGTTTTGTTT Alignment: AAACAAAACAA ASASAGAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 82 rmACAGCAGsr Reverse Complement Reverse Complement Backward 1 8 0.0319191 Consensus sequence (original motif): VVACAGCAGVD Consensus sequence (reverse complement motif): DVCTGCTGTVB Alignment: DVCTGCTGTVB ---TTCTSTST ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 95 CACACACACACA Reverse Complement Reverse Complement Forward 2 8 0.0398795 Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG Alignment: TGTGTGTGTGTG -TTCTSTST--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 79 CACACACACACA Reverse Complement Reverse Complement Backward 4 8 0.0407034 Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG Alignment: TGTGTGTGTGTG -TTCTSTST--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 102 AAAAAAAAAAA Original Motif Original Motif Forward 1 8 0.0441956 Consensus sequence (original motif): AAAAAAAAAAA Consensus sequence (reverse complement motif): TTTTTTTTTTT Alignment: AAAAAAAAAAA ASASAGAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 26 Motif 26 Reverse Complement Original Motif Forward 5 8 0.0451851 Consensus sequence (original motif): TKKTTTGTTTTTTT Consensus sequence (reverse complement motif): AAAAAAACAAARRA Alignment: TKKTTTGTTTTTTT ----TTCTSTST-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 27 Motif 27 Reverse Complement Reverse Complement Backward 2 8 0.0493389 Consensus sequence (original motif): CAYACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTKTG Alignment: TGTGTGTGTGTKTG -----TTCTSTST- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 25 Motif 25 Original Motif Original Motif Forward 6 8 0.0494079 Consensus sequence (original motif): CACACAVRCACACA Consensus sequence (reverse complement motif): TGTGTGKVTGTGTG Alignment: CACACAVRCACACA -----ASASAGAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 48 EWSR1-FLI1 Reverse Complement Reverse Complement Backward 8 8 0.0559328 Consensus sequence (original motif): GGAAGGAAGGAAGGAAGG Consensus sequence (reverse complement motif): CCTTCCTTCCTTCCTTCC Alignment: CCTTCCTTCCTTCCTTCC ---TTCTSTST------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 8 Motif name: Motif 8 Consensus sequence (original motif): TTTWWAAW Consensus sequence (reverse complement motif): WTTWWAAA ************************************************************************ Best Matches for Motif ID 8 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 104 wtTTWwAAAaw Original Motif Reverse Complement Backward 2 8 0 Consensus sequence (original motif): HHTTTWAAADD Consensus sequence (reverse complement motif): DDTTTWAAAHH Alignment: DDTTTWAAAHH --TTTWWAAW- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 85 wtATTTTTAww Original Motif Original Motif Forward 4 8 0.0386447 Consensus sequence (original motif): DHATTTTTADD Consensus sequence (reverse complement motif): DDTAAAAATHD Alignment: DHATTTTTADD ---TTTWWAAW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 81 wwTAAwAAww Original Motif Reverse Complement Forward 3 8 0.05878 Consensus sequence (original motif): DDTAAWAAHH Consensus sequence (reverse complement motif): HHTTWTTADD Alignment: HHTTWTTADD --TTTWWAAW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 76 wwWAAAAAwa Reverse Complement Original Motif Backward 3 8 0.0595334 Consensus sequence (original motif): WWAAAAAAWH Consensus sequence (reverse complement motif): HWTTTTTTWW Alignment: WWAAAAAAWH WTTWWAAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 83 wwTAAAwAww Reverse Complement Original Motif Backward 3 8 0.0618533 Consensus sequence (original motif): DDTAAAWAHH Consensus sequence (reverse complement motif): HHTWTTTADD Alignment: DDTAAAWAHH WTTWWAAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 71 wyATTTTAww Reverse Complement Original Motif Forward 3 8 0.0715612 Consensus sequence (original motif): DHATTTTADD Consensus sequence (reverse complement motif): DDTAAAATHD Alignment: DHATTTTADD --WTTWWAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 86 aaCAAAAACaa Reverse Complement Original Motif Backward 4 8 0.0766993 Consensus sequence (original motif): HHCAAAAACAH Consensus sequence (reverse complement motif): HTGTTTTTGHH Alignment: HHCAAAAACAH WTTWWAAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 102 AAAAAAAAAAA Original Motif Reverse Complement Forward 4 8 0.0793607 Consensus sequence (original motif): AAAAAAAAAAA Consensus sequence (reverse complement motif): TTTTTTTTTTT Alignment: TTTTTTTTTTT ---TTTWWAAW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 1 Motif 1 Original Motif Reverse Complement Backward 1 8 0.0832518 Consensus sequence (original motif): AAAAWAAA Consensus sequence (reverse complement motif): TTTWTTTT Alignment: TTTWTTTT TTTWWAAW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 98 wwTAATTAATTAww Reverse Complement Original Motif Backward 3 8 0.0855882 Consensus sequence (original motif): HDTAATTAATTAHD Consensus sequence (reverse complement motif): DHTAATTAATTADH Alignment: HDTAATTAATTAHD ----WTTWWAAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 9 Motif name: Motif 9 Consensus sequence (original motif): GCTGGGAW Consensus sequence (reverse complement motif): WTCCCAGC ************************************************************************ Best Matches for Motif ID 9 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 80 ssCwGGCCwGCss Original Motif Reverse Complement Forward 3 8 0.0777349 Consensus sequence (original motif): BBCWGGCCAGCBB Consensus sequence (reverse complement motif): BBGCTGGCCWGBB Alignment: BBGCTGGCCWGBB --GCTGGGAW--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 12 Motif 12 Original Motif Reverse Complement Backward 1 8 0.0778961 Consensus sequence (original motif): AGGMCAGC Consensus sequence (reverse complement motif): GCTGRCCT Alignment: GCTGRCCT GCTGGGAW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 89 ccCCmCACCcc Original Motif Reverse Complement Backward 2 8 0.0787949 Consensus sequence (original motif): HBCCMCACCHH Consensus sequence (reverse complement motif): DDGGTGRGGBD Alignment: DDGGTGRGGBD --GCTGGGAW- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 99 sgCTGGCCAGcs Original Motif Reverse Complement Forward 2 8 0.0902995 Consensus sequence (original motif): BBCTGGCCAGVV Consensus sequence (reverse complement motif): VVCTGGCCAGBB Alignment: VVCTGGCCAGBB -GCTGGGAW--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 ssGCTswGCCms Original Motif Original Motif Forward 3 8 0.0923672 Consensus sequence (original motif): VBGCTSAGCCHB Consensus sequence (reverse complement motif): BDGGCTSAGCBV Alignment: VBGCTSAGCCHB --GCTGGGAW-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 51 INSM1 Reverse Complement Reverse Complement Backward 3 8 0.0966101 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: MGCCCCCTGMCA --WTCCCAGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 93 rrAGGGGGArr Reverse Complement Reverse Complement Backward 3 8 0.0986017 Consensus sequence (original motif): VVAGGGGGAVV Consensus sequence (reverse complement motif): VVTCCCCCTVV Alignment: VVTCCCCCTVV -WTCCCAGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 48 EWSR1-FLI1 Reverse Complement Reverse Complement Backward 9 8 0.0991014 Consensus sequence (original motif): GGAAGGAAGGAAGGAAGG Consensus sequence (reverse complement motif): CCTTCCTTCCTTCCTTCC Alignment: CCTTCCTTCCTTCCTTCC --WTCCCAGC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 94 ssCGCksCGss Reverse Complement Reverse Complement Backward 4 8 0.0999463 Consensus sequence (original motif): VVCGCKSCGBB Consensus sequence (reverse complement motif): BBCGSRGCGVV Alignment: BBCGSRGCGVV WTCCCAGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 ssGMsGRGCGss Reverse Complement Reverse Complement Backward 3 8 0.10192 Consensus sequence (original motif): VVGCSGGGCGBB Consensus sequence (reverse complement motif): BBCGCCCSGCVV Alignment: BBCGCCCSGCVV --WTCCCAGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 10 Motif name: Motif 10 Consensus sequence (original motif): TAMATA Consensus sequence (reverse complement motif): TATRTA ************************************************************************ Best Matches for Motif ID 10 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 74 twTACATAvw Original Motif Original Motif Forward 3 6 0.0118037 Consensus sequence (original motif): HHTACATAVD Consensus sequence (reverse complement motif): DBTATGTAHH Alignment: HHTACATAVD --TAMATA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 83 wwTAAAwAww Original Motif Original Motif Backward 3 6 0.0306891 Consensus sequence (original motif): DDTAAAWAHH Consensus sequence (reverse complement motif): HHTWTTTADD Alignment: DDTAAAWAHH --TAMATA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 85 wtATTTTTAww Original Motif Reverse Complement Forward 3 6 0.0556351 Consensus sequence (original motif): DHATTTTTADD Consensus sequence (reverse complement motif): DDTAAAAATHD Alignment: DDTAAAAATHD --TAMATA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 100 wrTGTATACAyw Reverse Complement Original Motif Backward 5 6 0.063312 Consensus sequence (original motif): HDTGTATACAHD Consensus sequence (reverse complement motif): DHTGTATACADH Alignment: HDTGTATACAHD --TATRTA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 98 wwTAATTAATTAww Original Motif Reverse Complement Backward 3 6 0.0665502 Consensus sequence (original motif): HDTAATTAATTAHD Consensus sequence (reverse complement motif): DHTAATTAATTADH Alignment: DHTAATTAATTADH ------TAMATA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 2 Motif 2 Reverse Complement Reverse Complement Forward 3 6 0.0713843 Consensus sequence (original motif): CACACACA Consensus sequence (reverse complement motif): TGTGTGTG Alignment: TGTGTGTG --TATRTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 97 ryayAyAyrtGTRTrTry Reverse Complement Original Motif Backward 2 6 0.0717552 Consensus sequence (original motif): DHAYAYAYRTGTGTRTDH Consensus sequence (reverse complement motif): HDAMACACAKKTKTKTHD Alignment: DHAYAYAYRTGTGTRTDH -----------TATRTA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 75 yayAyAyACATrya Original Motif Original Motif Backward 3 6 0.0734948 Consensus sequence (original motif): HACAYAYACATRHD Consensus sequence (reverse complement motif): DHKATGTKTKTGTD Alignment: HACAYAYACATRHD ------TAMATA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 8 Motif 8 Reverse Complement Original Motif Backward 1 6 0.073632 Consensus sequence (original motif): TTTWWAAW Consensus sequence (reverse complement motif): WTTWWAAA Alignment: TTTWWAAW --TATRTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 3 Motif 3 Original Motif Reverse Complement Forward 2 6 0.0746703 Consensus sequence (original motif): AWATAMA Consensus sequence (reverse complement motif): TYTATWT Alignment: TYTATWT -TAMATA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 11 Motif name: Motif 11 Consensus sequence (original motif): CCGCCGCC Consensus sequence (reverse complement motif): GGCGGCGG ************************************************************************ Best Matches for Motif ID 11 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 78 sssCGssGCsss Original Motif Original Motif Backward 3 8 0.0257637 Consensus sequence (original motif): SSSCGSSGCSSS Consensus sequence (reverse complement motif): SSSGCSSCGSSS Alignment: SSSCGSSGCSSS --CCGCCGCC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 91 ssCGCCsCCrCCCss Reverse Complement Reverse Complement Forward 4 8 0.0356841 Consensus sequence (original motif): SSCGCCSCCGCCCSS Consensus sequence (reverse complement motif): SSGGGCGGSGGCGSS Alignment: SSGGGCGGSGGCGSS ---GGCGGCGG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 6 Motif 6 Reverse Complement Reverse Complement Forward 1 8 0.0379682 Consensus sequence (original motif): CCCCRCCC Consensus sequence (reverse complement motif): GGGKGGGG Alignment: GGGKGGGG GGCGGCGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 88 ssCrCYyYCGss Reverse Complement Reverse Complement Forward 4 8 0.0392404 Consensus sequence (original motif): BBCRCCYCCGBB Consensus sequence (reverse complement motif): BBCGGKGGMGBB Alignment: BBCGGKGGMGBB ---GGCGGCGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 94 ssCGCksCGss Reverse Complement Original Motif Forward 3 8 0.0444299 Consensus sequence (original motif): VVCGCKSCGBB Consensus sequence (reverse complement motif): BBCGSRGCGVV Alignment: VVCGCKSCGBB --GGCGGCGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 28 Zfx Original Motif Original Motif Backward 3 8 0.049392 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV ----CCGCCGCC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 4 Motif 4 Original Motif Original Motif Backward 1 8 0.0505097 Consensus sequence (original motif): CYBCCTCC Consensus sequence (reverse complement motif): GGAGGVMG Alignment: CYBCCTCC CCGCCGCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 52 Klf4 Original Motif Reverse Complement Forward 2 8 0.0512458 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: GCCYCMCCCD -CCGCCGCC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 32 SP1 Original Motif Original Motif Forward 3 8 0.0543239 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: CCCCKCCCCC --CCGCCGCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 51 INSM1 Original Motif Reverse Complement Backward 2 8 0.0580255 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: MGCCCCCTGMCA ---CCGCCGCC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 12 Motif name: Motif 12 Consensus sequence (original motif): AGGMCAGC Consensus sequence (reverse complement motif): GCTGRCCT ************************************************************************ Best Matches for Motif ID 12 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 80 ssCwGGCCwGCss Original Motif Original Motif Forward 4 8 0.0329398 Consensus sequence (original motif): BBCWGGCCAGCBB Consensus sequence (reverse complement motif): BBGCTGGCCWGBB Alignment: BBCWGGCCAGCBB ---AGGMCAGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 NR1H2RXRA Reverse Complement Reverse Complement Backward 10 8 0.0348586 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: GTTGACCTTTGACCTTT GCTGRCCT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 REST Original Motif Original Motif Backward 4 8 0.0382252 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC ----------AGGMCAGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 99 sgCTGGCCAGcs Reverse Complement Original Motif Forward 2 8 0.0441629 Consensus sequence (original motif): BBCTGGCCAGVV Consensus sequence (reverse complement motif): VVCTGGCCAGBB Alignment: BBCTGGCCAGVV -GCTGRCCT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 45 ESR1 Reverse Complement Reverse Complement Backward 6 8 0.0543245 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV -------GCTGRCCT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 70 mkARGCCACG Original Motif Original Motif Forward 3 8 0.0574643 Consensus sequence (original motif): CKAGGCCACG Consensus sequence (reverse complement motif): CGTGGCCTYG Alignment: CKAGGCCACG --AGGMCAGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 46 ESR2 Reverse Complement Reverse Complement Forward 9 8 0.0637872 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: BAGGYCABHBTGACCKHV --------GCTGRCCT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 9 Motif 9 Original Motif Reverse Complement Backward 1 8 0.0653089 Consensus sequence (original motif): GCTGGGAW Consensus sequence (reverse complement motif): WTCCCAGC Alignment: WTCCCAGC AGGMCAGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 MIZF Reverse Complement Reverse Complement Backward 3 8 0.0689211 Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV Alignment: GCGGACGTTV GCTGRCCT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 ssGCTswGCCms Reverse Complement Original Motif Forward 3 8 0.0700771 Consensus sequence (original motif): VBGCTSAGCCHB Consensus sequence (reverse complement motif): BDGGCTSAGCBV Alignment: VBGCTSAGCCHB --GCTGRCCT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 13 Motif name: Motif 13 Consensus sequence (original motif): GAGRCAGR Consensus sequence (reverse complement motif): MCTGKCTC ************************************************************************ Best Matches for Motif ID 13 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 92 tyTCTkTkTCyy Original Motif Reverse Complement Forward 3 8 0.0131318 Consensus sequence (original motif): BBTCTKTKTCHB Consensus sequence (reverse complement motif): VHGARAYAGAVV Alignment: VHGARAYAGAVV --GAGRCAGR-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 ssCGsCTCss Original Motif Reverse Complement Forward 3 8 0.0334555 Consensus sequence (original motif): VVCGSCTCBB Consensus sequence (reverse complement motif): BBGAGSCGVV Alignment: BBGAGSCGVV --GAGRCAGR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 48 EWSR1-FLI1 Original Motif Original Motif Backward 5 8 0.0397014 Consensus sequence (original motif): GGAAGGAAGGAAGGAAGG Consensus sequence (reverse complement motif): CCTTCCTTCCTTCCTTCC Alignment: GGAAGGAAGGAAGGAAGG ------GAGRCAGR---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 99 sgCTGGCCAGcs Reverse Complement Reverse Complement Forward 2 8 0.0475948 Consensus sequence (original motif): BBCTGGCCAGVV Consensus sequence (reverse complement motif): VVCTGGCCAGBB Alignment: VVCTGGCCAGBB -MCTGKCTC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 REST Reverse Complement Reverse Complement Forward 4 8 0.049302 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA ---MCTGKCTC---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 23 Motif 23 Original Motif Reverse Complement Backward 1 8 0.0551203 Consensus sequence (original motif): CCCRCCCC Consensus sequence (reverse complement motif): GGGGMGGG Alignment: GGGGMGGG GAGRCAGR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 80 ssCwGGCCwGCss Reverse Complement Original Motif Forward 2 8 0.055328 Consensus sequence (original motif): BBCWGGCCAGCBB Consensus sequence (reverse complement motif): BBGCTGGCCWGBB Alignment: BBCWGGCCAGCBB -MCTGKCTC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 93 rrAGGGGGArr Original Motif Original Motif Backward 1 8 0.0555608 Consensus sequence (original motif): VVAGGGGGAVV Consensus sequence (reverse complement motif): VVTCCCCCTVV Alignment: VVAGGGGGAVV ---GAGRCAGR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 45 ESR1 Reverse Complement Original Motif Backward 1 8 0.055859 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY ------------MCTGKCTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 12 Motif 12 Reverse Complement Reverse Complement Backward 1 8 0.0588565 Consensus sequence (original motif): AGGMCAGC Consensus sequence (reverse complement motif): GCTGRCCT Alignment: GCTGRCCT MCTGKCTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 14 Motif name: Motif 14 Consensus sequence (original motif): GCRCACRC Consensus sequence (reverse complement motif): GKGTGKGC ************************************************************************ Best Matches for Motif ID 14 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 27 Motif 27 Original Motif Original Motif Forward 4 8 0.0307099 Consensus sequence (original motif): CAYACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTKTG Alignment: CAYACACACACACA ---GCRCACRC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 79 CACACACACACA Original Motif Original Motif Backward 4 8 0.0357914 Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG Alignment: CACACACACACA -GCRCACRC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 95 CACACACACACA Original Motif Original Motif Forward 2 8 0.0366948 Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG Alignment: CACACACACACA -GCRCACRC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 52 Klf4 Reverse Complement Original Motif Backward 2 8 0.03983 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: DGGGYGKGGC -GKGTGKGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 25 Motif 25 Original Motif Original Motif Forward 6 8 0.0418776 Consensus sequence (original motif): CACACAVRCACACA Consensus sequence (reverse complement motif): TGTGTGKVTGTGTG Alignment: CACACAVRCACACA -----GCRCACRC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 44 Egr1 Reverse Complement Original Motif Forward 2 8 0.0429433 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: HGCGTGGGCGK -GKGTGKGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 6 Motif 6 Reverse Complement Reverse Complement Forward 1 8 0.0496623 Consensus sequence (original motif): CCCCRCCC Consensus sequence (reverse complement motif): GGGKGGGG Alignment: GGGKGGGG GKGTGKGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 89 ccCCmCACCcc Reverse Complement Reverse Complement Forward 2 8 0.0505252 Consensus sequence (original motif): HBCCMCACCHH Consensus sequence (reverse complement motif): DDGGTGRGGBD Alignment: DDGGTGRGGBD -GKGTGKGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 96 yrTGTGCACAyr Original Motif Original Motif Forward 4 8 0.0537384 Consensus sequence (original motif): BVTGTGCACABV Consensus sequence (reverse complement motif): BBTGTGCACAVV Alignment: BVTGTGCACABV ---GCRCACRC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 65 ssCGrGCGss Original Motif Reverse Complement Backward 2 8 0.067702 Consensus sequence (original motif): VSCGRGCGBV Consensus sequence (reverse complement motif): VBCGCMCGSV Alignment: VBCGCMCGSV -GCRCACRC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 15 Motif name: Motif 15 Consensus sequence (original motif): GRAAATG Consensus sequence (reverse complement motif): CATTTKC ************************************************************************ Best Matches for Motif ID 15 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 71 wyATTTTAww Reverse Complement Original Motif Forward 2 7 0.0397876 Consensus sequence (original motif): DHATTTTADD Consensus sequence (reverse complement motif): DDTAAAATHD Alignment: DHATTTTADD -CATTTKC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 85 wtATTTTTAww Original Motif Reverse Complement Backward 2 7 0.0408373 Consensus sequence (original motif): DHATTTTTADD Consensus sequence (reverse complement motif): DDTAAAAATHD Alignment: DDTAAAAATHD ---GRAAATG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 68 dwCTTTTCwy Reverse Complement Original Motif Backward 3 7 0.0424119 Consensus sequence (original motif): DHCTTTTCHH Consensus sequence (reverse complement motif): DHGAAAAGHD Alignment: DHCTTTTCHH -CATTTKC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 76 wwWAAAAAwa Original Motif Original Motif Backward 1 7 0.0627776 Consensus sequence (original motif): WWAAAAAAWH Consensus sequence (reverse complement motif): HWTTTTTTWW Alignment: WWAAAAAAWH ---GRAAATG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 97 ryayAyAyrtGTRTrTry Reverse Complement Reverse Complement Forward 8 7 0.0639234 Consensus sequence (original motif): DHAYAYAYRTGTGTRTDH Consensus sequence (reverse complement motif): HDAMACACAKKTKTKTHD Alignment: HDAMACACAKKTKTKTHD -------CATTTKC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 104 wtTTWwAAAaw Original Motif Original Motif Backward 1 7 0.0667775 Consensus sequence (original motif): HHTTTWAAADD Consensus sequence (reverse complement motif): DDTTTWAAAHH Alignment: HHTTTWAAADD ----GRAAATG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 36 PPARGRXRA Reverse Complement Reverse Complement Backward 6 7 0.0672334 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: TGRCCTKTGHCCKAB ---CATTTKC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 92 tyTCTkTkTCyy Reverse Complement Original Motif Forward 4 7 0.0684709 Consensus sequence (original motif): BBTCTKTKTCHB Consensus sequence (reverse complement motif): VHGARAYAGAVV Alignment: BBTCTKTKTCHB ---CATTTKC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 38 NR2F1 Reverse Complement Original Motif Forward 4 7 0.0685715 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: TGAMCTTTGMMCYT ---CATTTKC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 96 yrTGTGCACAyr Reverse Complement Original Motif Backward 6 7 0.0691109 Consensus sequence (original motif): BVTGTGCACABV Consensus sequence (reverse complement motif): BBTGTGCACAVV Alignment: BVTGTGCACABV CATTTKC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 16 Motif name: Motif 16 Consensus sequence (original motif): CTGDGTTC Consensus sequence (reverse complement motif): GAACDCAG ************************************************************************ Best Matches for Motif ID 16 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 33 RXRAVDR Original Motif Original Motif Backward 2 8 0.0341587 Consensus sequence (original motif): GGGTCAWBGRGTTCA Consensus sequence (reverse complement motif): TGAACKCBWTGACCC Alignment: GGGTCAWBGRGTTCA ------CTGDGTTC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 48 EWSR1-FLI1 Reverse Complement Original Motif Forward 6 8 0.0488413 Consensus sequence (original motif): GGAAGGAAGGAAGGAAGG Consensus sequence (reverse complement motif): CCTTCCTTCCTTCCTTCC Alignment: GGAAGGAAGGAAGGAAGG -----GAACDCAG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 38 NR2F1 Reverse Complement Original Motif Backward 6 8 0.0594848 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: TGAMCTTTGMMCYT -GAACDCAG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 40 Ar Original Motif Reverse Complement Backward 5 8 0.0618424 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: VRVDGGHACAVDDKGTHCTDWH ----------CTGDGTTC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 ssGCTswGCCms Reverse Complement Reverse Complement Backward 4 8 0.0677701 Consensus sequence (original motif): VBGCTSAGCCHB Consensus sequence (reverse complement motif): BDGGCTSAGCBV Alignment: BDGGCTSAGCBV -GAACDCAG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 REST Original Motif Reverse Complement Backward 5 8 0.0698387 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA ---------CTGDGTTC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 92 tyTCTkTkTCyy Original Motif Original Motif Backward 2 8 0.0714255 Consensus sequence (original motif): BBTCTKTKTCHB Consensus sequence (reverse complement motif): VHGARAYAGAVV Alignment: BBTCTKTKTCHB ---CTGDGTTC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 82 rmACAGCAGsr Reverse Complement Original Motif Forward 2 8 0.0725605 Consensus sequence (original motif): VVACAGCAGVD Consensus sequence (reverse complement motif): DVCTGCTGTVB Alignment: VVACAGCAGVD -GAACDCAG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 NR1H2RXRA Original Motif Original Motif Forward 7 8 0.0734192 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC ------CTGDGTTC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 27 Motif 27 Reverse Complement Original Motif Backward 4 8 0.0745877 Consensus sequence (original motif): CAYACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTKTG Alignment: CAYACACACACACA ---GAACDCAG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 17 Motif name: Motif 17 Consensus sequence (original motif): RGGAAR Consensus sequence (reverse complement motif): MTTCCK ************************************************************************ Best Matches for Motif ID 17 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 48 EWSR1-FLI1 Original Motif Original Motif Forward 12 6 0.0146511 Consensus sequence (original motif): GGAAGGAAGGAAGGAAGG Consensus sequence (reverse complement motif): CCTTCCTTCCTTCCTTCC Alignment: GGAAGGAAGGAAGGAAGG -----------RGGAAR- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 93 rrAGGGGGArr Original Motif Original Motif Backward 1 6 0.0442472 Consensus sequence (original motif): VVAGGGGGAVV Consensus sequence (reverse complement motif): VVTCCCCCTVV Alignment: VVAGGGGGAVV -----RGGAAR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 68 dwCTTTTCwy Original Motif Reverse Complement Backward 5 6 0.0560955 Consensus sequence (original motif): DHCTTTTCHH Consensus sequence (reverse complement motif): DHGAAAAGHD Alignment: DHGAAAAGHD RGGAAR---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 MIZF Reverse Complement Original Motif Forward 4 6 0.0608243 Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV Alignment: BAACGTCCGC ---MTTCCK- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 4 Motif 4 Original Motif Reverse Complement Backward 3 6 0.0620308 Consensus sequence (original motif): CYBCCTCC Consensus sequence (reverse complement motif): GGAGGVMG Alignment: GGAGGVMG RGGAAR-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 MZF1_5-13 Original Motif Original Motif Backward 1 6 0.0753789 Consensus sequence (original motif): BKAGGGGDAD Consensus sequence (reverse complement motif): BTHCCCCTYB Alignment: BKAGGGGDAD ----RGGAAR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 58 NFKB1 Original Motif Reverse Complement Backward 5 6 0.0757695 Consensus sequence (original motif): GGGGRTTCCCC Consensus sequence (reverse complement motif): GGGGAAKCCCC Alignment: GGGGAAKCCCC -RGGAAR---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 13 Motif 13 Original Motif Original Motif Forward 2 6 0.0767512 Consensus sequence (original motif): GAGRCAGR Consensus sequence (reverse complement motif): MCTGKCTC Alignment: GAGRCAGR -RGGAAR- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 92 tyTCTkTkTCyy Reverse Complement Original Motif Backward 7 6 0.0768115 Consensus sequence (original motif): BBTCTKTKTCHB Consensus sequence (reverse complement motif): VHGARAYAGAVV Alignment: BBTCTKTKTCHB MTTCCK------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 89 ccCCmCACCcc Original Motif Reverse Complement Backward 5 6 0.0794812 Consensus sequence (original motif): HBCCMCACCHH Consensus sequence (reverse complement motif): DDGGTGRGGBD Alignment: DDGGTGRGGBD -RGGAAR---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 18 Motif name: Motif 18 Consensus sequence (original motif): AMACA Consensus sequence (reverse complement motif): TGTRT ************************************************************************ Best Matches for Motif ID 18 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 2 Motif 2 Original Motif Original Motif Backward 1 5 0 Consensus sequence (original motif): CACACACA Consensus sequence (reverse complement motif): TGTGTGTG Alignment: CACACACA ---AMACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 79 CACACACACACA Original Motif Original Motif Backward 3 5 0.0148279 Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG Alignment: CACACACACACA -----AMACA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 27 Motif 27 Original Motif Original Motif Backward 5 5 0.0192752 Consensus sequence (original motif): CAYACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTKTG Alignment: CAYACACACACACA -----AMACA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 95 CACACACACACA Reverse Complement Reverse Complement Backward 4 5 0.0228414 Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG Alignment: TGTGTGTGTGTG ----TGTRT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 25 Motif 25 Reverse Complement Reverse Complement Backward 10 5 0.0233505 Consensus sequence (original motif): CACACAVRCACACA Consensus sequence (reverse complement motif): TGTGTGKVTGTGTG Alignment: TGTGTGKVTGTGTG TGTRT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 69 aaACAAAACaa Original Motif Original Motif Backward 2 5 0.0274014 Consensus sequence (original motif): AAACAAAACAA Consensus sequence (reverse complement motif): TTGTTTTGTTT Alignment: AAACAAAACAA -----AMACA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 86 aaCAAAAACaa Original Motif Original Motif Backward 2 5 0.0291354 Consensus sequence (original motif): HHCAAAAACAH Consensus sequence (reverse complement motif): HTGTTTTTGHH Alignment: HHCAAAAACAH -----AMACA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 97 ryayAyAyrtGTRTrTry Original Motif Reverse Complement Backward 10 5 0.0293401 Consensus sequence (original motif): DHAYAYAYRTGTGTRTDH Consensus sequence (reverse complement motif): HDAMACACAKKTKTKTHD Alignment: HDAMACACAKKTKTKTHD ----AMACA--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 100 wrTGTATACAyw Reverse Complement Original Motif Forward 3 5 0.0302831 Consensus sequence (original motif): HDTGTATACAHD Consensus sequence (reverse complement motif): DHTGTATACADH Alignment: HDTGTATACAHD --TGTRT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 5 Motif 5 Original Motif Original Motif Backward 3 5 0.0378142 Consensus sequence (original motif): AAAASAAA Consensus sequence (reverse complement motif): TTTSTTTT Alignment: AAAASAAA -AMACA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 19 Motif name: Motif 19 Consensus sequence (original motif): AGSCWGG Consensus sequence (reverse complement motif): CCWGSCT ************************************************************************ Best Matches for Motif ID 19 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 13 Motif 13 Reverse Complement Reverse Complement Forward 1 7 0.0206869 Consensus sequence (original motif): GAGRCAGR Consensus sequence (reverse complement motif): MCTGKCTC Alignment: MCTGKCTC CCWGSCT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 48 EWSR1-FLI1 Original Motif Original Motif Backward 5 7 0.0395671 Consensus sequence (original motif): GGAAGGAAGGAAGGAAGG Consensus sequence (reverse complement motif): CCTTCCTTCCTTCCTTCC Alignment: GGAAGGAAGGAAGGAAGG -------AGSCWGG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 80 ssCwGGCCwGCss Reverse Complement Original Motif Backward 1 7 0.0484872 Consensus sequence (original motif): BBCWGGCCAGCBB Consensus sequence (reverse complement motif): BBGCTGGCCWGBB Alignment: BBCWGGCCAGCBB ------CCWGSCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 51 INSM1 Reverse Complement Reverse Complement Forward 6 7 0.0494688 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: MGCCCCCTGMCA -----CCWGSCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 ssCGsCTCss Original Motif Reverse Complement Backward 1 7 0.054651 Consensus sequence (original motif): VVCGSCTCBB Consensus sequence (reverse complement motif): BBGAGSCGVV Alignment: BBGAGSCGVV ---AGSCWGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 90 ssCGsCwsCss Original Motif Original Motif Forward 3 7 0.0578314 Consensus sequence (original motif): BBCGSCWSCBB Consensus sequence (reverse complement motif): BBGSWGSCGBB Alignment: BBCGSCWSCBB --AGSCWGG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 64 Tcfcp2l1 Reverse Complement Original Motif Forward 1 7 0.0669354 Consensus sequence (original motif): CCAGYYHVADCCRG Consensus sequence (reverse complement motif): CKGGDTBDMMCTGG Alignment: CCAGYYHVADCCRG CCWGSCT------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 REST Original Motif Original Motif Forward 7 7 0.0693747 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC ------AGSCWGG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 32 SP1 Reverse Complement Original Motif Backward 3 7 0.0695377 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: CCCCKCCCCC -CCWGSCT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 99 sgCTGGCCAGcs Reverse Complement Original Motif Forward 2 7 0.0697712 Consensus sequence (original motif): BBCTGGCCAGVV Consensus sequence (reverse complement motif): VVCTGGCCAGBB Alignment: BBCTGGCCAGVV -CCWGSCT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 20 Motif name: Motif 20 Consensus sequence (original motif): CTCTGY Consensus sequence (reverse complement motif): KCAGAG ************************************************************************ Best Matches for Motif ID 20 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 ssGCTswGCCms Original Motif Original Motif Forward 4 6 0.0323407 Consensus sequence (original motif): VBGCTSAGCCHB Consensus sequence (reverse complement motif): BDGGCTSAGCBV Alignment: VBGCTSAGCCHB ---CTCTGY--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 7 Motif 7 Reverse Complement Original Motif Forward 3 6 0.0352938 Consensus sequence (original motif): ASASAGAA Consensus sequence (reverse complement motif): TTCTSTST Alignment: ASASAGAA --KCAGAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 NR1H2RXRA Reverse Complement Original Motif Backward 7 6 0.0398495 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC -----KCAGAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 36 PPARGRXRA Reverse Complement Original Motif Backward 5 6 0.0415907 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA -----KCAGAG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 11 Motif 11 Original Motif Original Motif Forward 2 6 0.0430865 Consensus sequence (original motif): CCGCCGCC Consensus sequence (reverse complement motif): GGCGGCGG Alignment: CCGCCGCC -CTCTGY- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 ssCKCwsCGss Original Motif Original Motif Backward 2 6 0.0439226 Consensus sequence (original motif): BVCGCWSCGBV Consensus sequence (reverse complement motif): VBCGSWGCGVB Alignment: BVCGCWSCGBV ----CTCTGY- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 38 NR2F1 Reverse Complement Reverse Complement Forward 5 6 0.0462597 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: AKGYYCAAAGRTCA ----KCAGAG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 92 tyTCTkTkTCyy Original Motif Original Motif Forward 2 6 0.0467436 Consensus sequence (original motif): BBTCTKTKTCHB Consensus sequence (reverse complement motif): VHGARAYAGAVV Alignment: BBTCTKTKTCHB -CTCTGY----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 50 HNF4A Reverse Complement Original Motif Forward 4 6 0.0481824 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: RGGBCAAAGKYCA ---KCAGAG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 MIZF Original Motif Original Motif Forward 5 6 0.049747 Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV Alignment: BAACGTCCGC ----CTCTGY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 21 Motif name: Motif 21 Consensus sequence (original motif): ATKTM Consensus sequence (reverse complement motif): RARAT ************************************************************************ Best Matches for Motif ID 21 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 15 Motif 15 Original Motif Reverse Complement Forward 2 5 0.0065927 Consensus sequence (original motif): GRAAATG Consensus sequence (reverse complement motif): CATTTKC Alignment: CATTTKC -ATKTM- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 10 Motif 10 Reverse Complement Original Motif Forward 2 5 0.0217628 Consensus sequence (original motif): TAMATA Consensus sequence (reverse complement motif): TATRTA Alignment: TAMATA -RARAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 85 wtATTTTTAww Reverse Complement Reverse Complement Forward 5 5 0.0314602 Consensus sequence (original motif): DHATTTTTADD Consensus sequence (reverse complement motif): DDTAAAAATHD Alignment: DDTAAAAATHD ----RARAT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 71 wyATTTTAww Reverse Complement Reverse Complement Backward 3 5 0.0314958 Consensus sequence (original motif): DHATTTTADD Consensus sequence (reverse complement motif): DDTAAAATHD Alignment: DDTAAAATHD ---RARAT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 92 tyTCTkTkTCyy Reverse Complement Reverse Complement Backward 6 5 0.0326182 Consensus sequence (original motif): BBTCTKTKTCHB Consensus sequence (reverse complement motif): VHGARAYAGAVV Alignment: VHGARAYAGAVV --RARAT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 74 twTACATAvw Original Motif Reverse Complement Forward 4 5 0.0335447 Consensus sequence (original motif): HHTACATAVD Consensus sequence (reverse complement motif): DBTATGTAHH Alignment: DBTATGTAHH ---ATKTM-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 83 wwTAAAwAww Original Motif Reverse Complement Forward 4 5 0.0514182 Consensus sequence (original motif): DDTAAAWAHH Consensus sequence (reverse complement motif): HHTWTTTADD Alignment: HHTWTTTADD ---ATKTM-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 76 wwWAAAAAwa Reverse Complement Original Motif Forward 5 5 0.0597589 Consensus sequence (original motif): WWAAAAAAWH Consensus sequence (reverse complement motif): HWTTTTTTWW Alignment: WWAAAAAAWH ----RARAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 101 AAAAAAAAAAA Original Motif Reverse Complement Forward 10 5 0.0609742 Consensus sequence (original motif): HVCATGCATGCABD Consensus sequence (reverse complement motif): DVTGCATGCATGBH Alignment: DVTGCATGCATGBH ---------ATKTM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 100 wrTGTATACAyw Original Motif Reverse Complement Forward 2 5 0.0620607 Consensus sequence (original motif): HDTGTATACAHD Consensus sequence (reverse complement motif): DHTGTATACADH Alignment: DHTGTATACADH -ATKTM------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 22 Motif name: Motif 22 Consensus sequence (original motif): CMGCRGC Consensus sequence (reverse complement motif): GCKGCYG ************************************************************************ Best Matches for Motif ID 22 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 11 Motif 11 Original Motif Original Motif Backward 2 7 0.0224079 Consensus sequence (original motif): CCGCCGCC Consensus sequence (reverse complement motif): GGCGGCGG Alignment: CCGCCGCC CMGCRGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 82 rmACAGCAGsr Reverse Complement Reverse Complement Forward 2 7 0.0263091 Consensus sequence (original motif): VVACAGCAGVD Consensus sequence (reverse complement motif): DVCTGCTGTVB Alignment: DVCTGCTGTVB -GCKGCYG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 94 ssCGCksCGss Original Motif Reverse Complement Forward 2 7 0.0468409 Consensus sequence (original motif): VVCGCKSCGBB Consensus sequence (reverse complement motif): BBCGSRGCGVV Alignment: BBCGSRGCGVV -CMGCRGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 90 ssCGsCwsCss Reverse Complement Reverse Complement Backward 3 7 0.0481413 Consensus sequence (original motif): BBCGSCWSCBB Consensus sequence (reverse complement motif): BBGSWGSCGBB Alignment: BBGSWGSCGBB --GCKGCYG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 REST Original Motif Original Motif Backward 13 7 0.0604814 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC --CMGCRGC------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 78 sssCGssGCsss Original Motif Original Motif Backward 4 7 0.0620984 Consensus sequence (original motif): SSSCGSSGCSSS Consensus sequence (reverse complement motif): SSSGCSSCGSSS Alignment: SSSCGSSGCSSS --CMGCRGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 84 wsAGCTACwy Original Motif Reverse Complement Forward 1 7 0.0669388 Consensus sequence (original motif): DVAGCTACHB Consensus sequence (reverse complement motif): VHGTAGCTVD Alignment: VHGTAGCTVD CMGCRGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 6 Motif 6 Original Motif Original Motif Forward 1 7 0.0712961 Consensus sequence (original motif): CCCCRCCC Consensus sequence (reverse complement motif): GGGKGGGG Alignment: CCCCRCCC CMGCRGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 MIZF Reverse Complement Reverse Complement Forward 1 7 0.0721831 Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV Alignment: GCGGACGTTV GCKGCYG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 ssCKCwsCGss Original Motif Reverse Complement Backward 4 7 0.0730352 Consensus sequence (original motif): BVCGCWSCGBV Consensus sequence (reverse complement motif): VBCGSWGCGVB Alignment: VBCGSWGCGVB -CMGCRGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 23 Motif name: Motif 23 Consensus sequence (original motif): CCCRCCCC Consensus sequence (reverse complement motif): GGGGMGGG ************************************************************************ Best Matches for Motif ID 23 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 6 Motif 6 Reverse Complement Reverse Complement Backward 1 8 0.0476511 Consensus sequence (original motif): CCCCRCCC Consensus sequence (reverse complement motif): GGGKGGGG Alignment: GGGKGGGG GGGGMGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 32 SP1 Original Motif Original Motif Backward 2 8 0.05625 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: CCCCKCCCCC -CCCRCCCC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 52 Klf4 Reverse Complement Original Motif Forward 1 8 0.0600533 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: DGGGYGKGGC GGGGMGGG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 89 ccCCmCACCcc Original Motif Original Motif Forward 4 8 0.0605366 Consensus sequence (original motif): HBCCMCACCHH Consensus sequence (reverse complement motif): DDGGTGRGGBD Alignment: HBCCMCACCHH ---CCCRCCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 91 ssCGCCsCCrCCCss Original Motif Original Motif Forward 7 8 0.0617989 Consensus sequence (original motif): SSCGCCSCCGCCCSS Consensus sequence (reverse complement motif): SSGGGCGGSGGCGSS Alignment: SSCGCCSCCGCCCSS ------CCCRCCCC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 88 ssCrCYyYCGss Original Motif Original Motif Forward 1 8 0.0740354 Consensus sequence (original motif): BBCRCCYCCGBB Consensus sequence (reverse complement motif): BBCGGKGGMGBB Alignment: BBCRCCYCCGBB CCCRCCCC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 44 Egr1 Original Motif Reverse Complement Forward 4 8 0.0789263 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: YCGCCCACGCH ---CCCRCCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 ssGMsGRGCGss Original Motif Reverse Complement Forward 1 8 0.0848347 Consensus sequence (original motif): VVGCSGGGCGBB Consensus sequence (reverse complement motif): BBCGCCCSGCVV Alignment: BBCGCCCSGCVV CCCRCCCC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 RREB1 Original Motif Original Motif Forward 7 8 0.0902899 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: CCCCMAAMCAMCCMCMMMCV ------CCCRCCCC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 94 ssCGCksCGss Reverse Complement Reverse Complement Backward 1 8 0.0961855 Consensus sequence (original motif): VVCGCKSCGBB Consensus sequence (reverse complement motif): BBCGSRGCGVV Alignment: BBCGSRGCGVV ---GGGGMGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 24 Motif name: Motif 24 Consensus sequence (original motif): CTGGGA Consensus sequence (reverse complement motif): TCCCAG ************************************************************************ Best Matches for Motif ID 24 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 9 Motif 9 Original Motif Original Motif Forward 2 6 0 Consensus sequence (original motif): GCTGGGAW Consensus sequence (reverse complement motif): WTCCCAGC Alignment: GCTGGGAW -CTGGGA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 REST Reverse Complement Reverse Complement Backward 9 6 0.0575099 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA -------TCCCAG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 93 rrAGGGGGArr Reverse Complement Reverse Complement Backward 4 6 0.0578035 Consensus sequence (original motif): VVAGGGGGAVV Consensus sequence (reverse complement motif): VVTCCCCCTVV Alignment: VVTCCCCCTVV --TCCCAG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 39 MZF1_1-4 Reverse Complement Reverse Complement Forward 1 6 0.0598868 Consensus sequence (original motif): BGGGGA Consensus sequence (reverse complement motif): TCCCCV Alignment: TCCCCV TCCCAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 103 ccCCAGTGCAbr Reverse Complement Original Motif Backward 7 6 0.0660266 Consensus sequence (original motif): HVCCAGTGCABD Consensus sequence (reverse complement motif): DBTGCACTGGVD Alignment: HVCCAGTGCABD TCCCAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 RREB1 Original Motif Reverse Complement Backward 1 6 0.0691671 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: BGRRRGRGGRTGRTTYGGGG --------------CTGGGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 16 Motif 16 Original Motif Original Motif Forward 1 6 0.0726527 Consensus sequence (original motif): CTGDGTTC Consensus sequence (reverse complement motif): GAACDCAG Alignment: CTGDGTTC CTGGGA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 51 INSM1 Original Motif Original Motif Backward 4 6 0.0740406 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: TGYCAGGGGGCR ---CTGGGA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 29 Zfp423 Reverse Complement Reverse Complement Forward 4 6 0.0806694 Consensus sequence (original motif): GSMMCCYARGGKKKC Consensus sequence (reverse complement motif): GYRYCCMTKGGYRSC Alignment: GYRYCCMTKGGYRSC ---TCCCAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 99 sgCTGGCCAGcs Reverse Complement Reverse Complement Backward 3 6 0.0827238 Consensus sequence (original motif): BBCTGGCCAGVV Consensus sequence (reverse complement motif): VVCTGGCCAGBB Alignment: VVCTGGCCAGBB ----TCCCAG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 25 Motif name: Motif 25 Consensus sequence (original motif): CACACAVRCACACA Consensus sequence (reverse complement motif): TGTGTGKVTGTGTG ************************************************************************ Best Matches for Motif ID 25 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 27 Motif 27 Original Motif Original Motif Forward 1 14 0.0190992 Consensus sequence (original motif): CAYACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTKTG Alignment: CAYACACACACACA CACACAVRCACACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 75 yayAyAyACATrya Original Motif Original Motif Backward 1 14 0.0790984 Consensus sequence (original motif): HACAYAYACATRHD Consensus sequence (reverse complement motif): DHKATGTKTKTGTD Alignment: HACAYAYACATRHD CACACAVRCACACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 RREB1 Original Motif Original Motif Backward 3 14 0.0889603 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: CCCCMAAMCAMCCMCMMMCV ----CACACAVRCACACA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 97 ryayAyAyrtGTRTrTry Reverse Complement Original Motif Forward 2 14 0.0894862 Consensus sequence (original motif): DHAYAYAYRTGTGTRTDH Consensus sequence (reverse complement motif): HDAMACACAKKTKTKTHD Alignment: DHAYAYAYRTGTGTRTDH -TGTGTGKVTGTGTG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 101 AAAAAAAAAAA Original Motif Original Motif Backward 1 14 0.0983454 Consensus sequence (original motif): HVCATGCATGCABD Consensus sequence (reverse complement motif): DVTGCATGCATGBH Alignment: HVCATGCATGCABD CACACAVRCACACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 26 Motif 26 Reverse Complement Original Motif Forward 2 13 0.581031 Consensus sequence (original motif): TKKTTTGTTTTTTT Consensus sequence (reverse complement motif): AAAAAAACAAARRA Alignment: TKKTTTGTTTTTTT- -TGTGTGKVTGTGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 33 RXRAVDR Original Motif Reverse Complement Forward 3 13 0.596059 Consensus sequence (original motif): GGGTCAWBGRGTTCA Consensus sequence (reverse complement motif): TGAACKCBWTGACCC Alignment: TGAACKCBWTGACCC- --CACACAVRCACACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 91 ssCGCCsCCrCCCss Original Motif Original Motif Forward 3 13 0.600159 Consensus sequence (original motif): SSCGCCSCCGCCCSS Consensus sequence (reverse complement motif): SSGGGCGGSGGCGSS Alignment: SSCGCCSCCGCCCSS- --CACACAVRCACACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 79 CACACACACACA Original Motif Original Motif Backward 1 12 1.01986 Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG Alignment: --CACACACACACA CACACAVRCACACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 95 CACACACACACA Reverse Complement Reverse Complement Forward 1 12 1.02642 Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG Alignment: TGTGTGTGTGTG-- TGTGTGKVTGTGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 26 Motif name: Motif 26 Consensus sequence (original motif): TKKTTTGTTTTTTT Consensus sequence (reverse complement motif): AAAAAAACAAARRA ************************************************************************ Best Matches for Motif ID 26 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 75 yayAyAyACATrya Original Motif Reverse Complement Backward 1 14 0.0683766 Consensus sequence (original motif): HACAYAYACATRHD Consensus sequence (reverse complement motif): DHKATGTKTKTGTD Alignment: DHKATGTKTKTGTD TKKTTTGTTTTTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 48 EWSR1-FLI1 Reverse Complement Original Motif Forward 3 14 0.0745773 Consensus sequence (original motif): GGAAGGAAGGAAGGAAGG Consensus sequence (reverse complement motif): CCTTCCTTCCTTCCTTCC Alignment: GGAAGGAAGGAAGGAAGG --AAAAAAACAAARRA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 25 Motif 25 Reverse Complement Original Motif Backward 2 13 0.561185 Consensus sequence (original motif): CACACAVRCACACA Consensus sequence (reverse complement motif): TGTGTGKVTGTGTG Alignment: -CACACAVRCACACA AAAAAAACAAARRA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 27 Motif 27 Original Motif Reverse Complement Backward 2 13 0.563745 Consensus sequence (original motif): CAYACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTKTG Alignment: -TGTGTGTGTGTKTG TKKTTTGTTTTTTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 NR1H2RXRA Reverse Complement Original Motif Backward 5 13 0.567794 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: -AAAGGTCAAAGGTCAAC AAAAAAACAAARRA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 98 wwTAATTAATTAww Reverse Complement Reverse Complement Backward 2 13 0.570142 Consensus sequence (original motif): HDTAATTAATTAHD Consensus sequence (reverse complement motif): DHTAATTAATTADH Alignment: -DHTAATTAATTADH AAAAAAACAAARRA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 36 PPARGRXRA Reverse Complement Original Motif Backward 3 13 0.575193 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: -BTRGGDCARAGGKCA AAAAAAACAAARRA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 40 Ar Original Motif Reverse Complement Forward 10 13 0.576204 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: VRVDGGHACAVDDKGTHCTDWH- ---------TKKTTTGTTTTTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 97 ryayAyAyrtGTRTrTry Reverse Complement Reverse Complement Backward 7 12 1.06681 Consensus sequence (original motif): DHAYAYAYRTGTGTRTDH Consensus sequence (reverse complement motif): HDAMACACAKKTKTKTHD Alignment: --HDAMACACAKKTKTKTHD AAAAAAACAAARRA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 92 tyTCTkTkTCyy Original Motif Original Motif Backward 1 12 1.07221 Consensus sequence (original motif): BBTCTKTKTCHB Consensus sequence (reverse complement motif): VHGARAYAGAVV Alignment: --BBTCTKTKTCHB TKKTTTGTTTTTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 27 Motif name: Motif 27 Consensus sequence (original motif): CAYACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTKTG ************************************************************************ Best Matches for Motif ID 27 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 25 Motif 25 Original Motif Original Motif Forward 1 14 0.0198904 Consensus sequence (original motif): CACACAVRCACACA Consensus sequence (reverse complement motif): TGTGTGKVTGTGTG Alignment: CACACAVRCACACA CAYACACACACACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 75 yayAyAyACATrya Original Motif Original Motif Forward 1 14 0.0728259 Consensus sequence (original motif): HACAYAYACATRHD Consensus sequence (reverse complement motif): DHKATGTKTKTGTD Alignment: HACAYAYACATRHD CAYACACACACACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 RREB1 Original Motif Original Motif Backward 3 14 0.0866168 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: CCCCMAAMCAMCCMCMMMCV ----CAYACACACACACA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 97 ryayAyAyrtGTRTrTry Reverse Complement Original Motif Backward 2 14 0.0949484 Consensus sequence (original motif): DHAYAYAYRTGTGTRTDH Consensus sequence (reverse complement motif): HDAMACACAKKTKTKTHD Alignment: DHAYAYAYRTGTGTRTDH ---TGTGTGTGTGTKTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 101 AAAAAAAAAAA Original Motif Original Motif Forward 1 14 0.0966618 Consensus sequence (original motif): HVCATGCATGCABD Consensus sequence (reverse complement motif): DVTGCATGCATGBH Alignment: HVCATGCATGCABD CAYACACACACACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 26 Motif 26 Original Motif Reverse Complement Forward 2 13 0.584382 Consensus sequence (original motif): TKKTTTGTTTTTTT Consensus sequence (reverse complement motif): AAAAAAACAAARRA Alignment: AAAAAAACAAARRA- -CAYACACACACACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 79 CACACACACACA Original Motif Original Motif Backward 1 12 1 Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG Alignment: --CACACACACACA CAYACACACACACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 95 CACACACACACA Reverse Complement Reverse Complement Forward 1 12 1.00916 Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG Alignment: TGTGTGTGTGTG-- TGTGTGTGTGTKTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 92 tyTCTkTkTCyy Reverse Complement Original Motif Forward 1 12 1.08698 Consensus sequence (original motif): BBTCTKTKTCHB Consensus sequence (reverse complement motif): VHGARAYAGAVV Alignment: BBTCTKTKTCHB-- TGTGTGTGTGTKTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 51 INSM1 Reverse Complement Original Motif Backward 1 12 1.09649 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: --TGYCAGGGGGCR TGTGTGTGTGTKTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 28 Motif name: Zfx Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB ************************************************************************ Best Matches for Motif ID 28 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 91 ssCGCCsCCrCCCss Original Motif Original Motif Forward 1 14 0.0478501 Consensus sequence (original motif): SSCGCCSCCGCCCSS Consensus sequence (reverse complement motif): SSGGGCGGSGGCGSS Alignment: SSCGCCSCCGCCCSS BBVGCCBVGGCCTV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 61 Pax5 Original Motif Original Motif Backward 5 14 0.0611182 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR --BBVGCCBVGGCCTV---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 46 ESR2 Original Motif Reverse Complement Backward 2 14 0.0635714 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: BAGGYCABHBTGACCKHV ---BBVGCCBVGGCCTV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 45 ESR1 Original Motif Reverse Complement Backward 5 14 0.0722733 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV --BBVGCCBVGGCCTV---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 64 Tcfcp2l1 Original Motif Original Motif Backward 1 14 0.0732898 Consensus sequence (original motif): CCAGYYHVADCCRG Consensus sequence (reverse complement motif): CKGGDTBDMMCTGG Alignment: CCAGYYHVADCCRG BBVGCCBVGGCCTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 29 Zfp423 Reverse Complement Reverse Complement Forward 2 14 0.0747812 Consensus sequence (original motif): GSMMCCYARGGKKKC Consensus sequence (reverse complement motif): GYRYCCMTKGGYRSC Alignment: GYRYCCMTKGGYRSC -VAGGCCBBGGCVBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 37 PLAG1 Original Motif Reverse Complement Forward 1 14 0.0796879 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: CCCCCTTGGGCCCC BBVGCCBVGGCCTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 REST Reverse Complement Reverse Complement Forward 5 14 0.0812253 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA ----VAGGCCBBGGCVBB--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 40 Ar Reverse Complement Original Motif Backward 4 14 0.0832838 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: HWDAGHACRHHVTGTHCCHVMV -----VAGGCCBBGGCVBB--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 36 PPARGRXRA Original Motif Reverse Complement Forward 1 14 0.0836605 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: TGRCCTKTGHCCKAB BBVGCCBVGGCCTV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 29 Motif name: Zfp423 Consensus sequence (original motif): GSMMCCYARGGKKKC Consensus sequence (reverse complement motif): GYRYCCMTKGGYRSC ************************************************************************ Best Matches for Motif ID 29 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 40 Ar Original Motif Original Motif Backward 5 15 0.0465445 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: HWDAGHACRHHVTGTHCCHVMV ---GSMMCCYARGGKKKC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 61 Pax5 Original Motif Original Motif Forward 3 15 0.0466076 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR --GSMMCCYARGGKKKC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 REST Reverse Complement Original Motif Backward 4 15 0.0475403 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC ---GYRYCCMTKGGYRSC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 97 ryayAyAyrtGTRTrTry Reverse Complement Original Motif Forward 3 15 0.0497128 Consensus sequence (original motif): DHAYAYAYRTGTGTRTDH Consensus sequence (reverse complement motif): HDAMACACAKKTKTKTHD Alignment: DHAYAYAYRTGTGTRTDH --GYRYCCMTKGGYRSC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 33 RXRAVDR Reverse Complement Original Motif Forward 1 15 0.053047 Consensus sequence (original motif): GGGTCAWBGRGTTCA Consensus sequence (reverse complement motif): TGAACKCBWTGACCC Alignment: GGGTCAWBGRGTTCA GYRYCCMTKGGYRSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 37 PLAG1 Original Motif Original Motif Forward 1 14 0.534468 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: GGGGCCCAAGGGGG- GSMMCCYARGGKKKC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 28 Zfx Reverse Complement Reverse Complement Backward 1 14 0.54645 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: -VAGGCCBBGGCVBB GYRYCCMTKGGYRSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 45 ESR1 Reverse Complement Original Motif Backward 8 13 1.03908 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: --VDBHMAGGTCACCCTGACCY GYRYCCMTKGGYRSC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 RREB1 Reverse Complement Reverse Complement Forward 8 13 1.05606 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: BGRRRGRGGRTGRTTYGGGG-- -------GYRYCCMTKGGYRSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 88 ssCrCYyYCGss Reverse Complement Reverse Complement Backward 1 12 1.54285 Consensus sequence (original motif): BBCRCCYCCGBB Consensus sequence (reverse complement motif): BBCGGKGGMGBB Alignment: ---BBCGGKGGMGBB GYRYCCMTKGGYRSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 30 Motif name: ZEB1 Consensus sequence (original motif): CACCTD Consensus sequence (reverse complement motif): HAGGTG ************************************************************************ Best Matches for Motif ID 30 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 62 RORA_1 Original Motif Reverse Complement Backward 4 6 0.0141289 Consensus sequence (original motif): AWVDAGGTCA Consensus sequence (reverse complement motif): TGACCTDVWT Alignment: TGACCTDVWT -CACCTD--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 REST Reverse Complement Reverse Complement Backward 6 6 0.0143133 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA ----------HAGGTG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 89 ccCCmCACCcc Original Motif Original Motif Backward 1 6 0.0148347 Consensus sequence (original motif): HBCCMCACCHH Consensus sequence (reverse complement motif): DDGGTGRGGBD Alignment: HBCCMCACCHH -----CACCTD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 93 rrAGGGGGArr Reverse Complement Original Motif Backward 5 6 0.0194512 Consensus sequence (original motif): VVAGGGGGAVV Consensus sequence (reverse complement motif): VVTCCCCCTVV Alignment: VVAGGGGGAVV -HAGGTG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 41 Arnt Original Motif Reverse Complement Backward 1 6 0.0207244 Consensus sequence (original motif): CACGTG Consensus sequence (reverse complement motif): CACGTG Alignment: CACGTG CACCTD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 47 Esrrb Reverse Complement Original Motif Forward 1 6 0.0207244 Consensus sequence (original motif): CACGTG Consensus sequence (reverse complement motif): CACGTG Alignment: CACGTG HAGGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 NR1H2RXRA Original Motif Reverse Complement Backward 2 6 0.0232753 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: GTTGACCTTTGACCTTT ----------CACCTD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 49 HIF1AARNT Reverse Complement Original Motif Forward 2 6 0.0237889 Consensus sequence (original motif): VBACGTGV Consensus sequence (reverse complement motif): VCACGTBV Alignment: VBACGTGV -HAGGTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 51 INSM1 Reverse Complement Original Motif Forward 4 6 0.0262123 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: TGYCAGGGGGCR ---HAGGTG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 36 PPARGRXRA Original Motif Reverse Complement Backward 9 6 0.0264837 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: TGRCCTKTGHCCKAB -CACCTD-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 31 Motif name: TFAP2A Consensus sequence (original motif): GCCBBVRGS Consensus sequence (reverse complement motif): SCMVBBGGC ************************************************************************ Best Matches for Motif ID 31 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 28 Zfx Reverse Complement Original Motif Backward 3 9 0.0355616 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV ---SCMVBBGGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 ssGMsGRGCGss Original Motif Reverse Complement Forward 4 9 0.0612124 Consensus sequence (original motif): VVGCSGGGCGBB Consensus sequence (reverse complement motif): BBCGCCCSGCVV Alignment: BBCGCCCSGCVV ---GCCBBVRGS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 37 PLAG1 Original Motif Original Motif Forward 4 9 0.0638957 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: GGGGCCCAAGGGGG ---GCCBBVRGS-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 29 Zfp423 Reverse Complement Reverse Complement Backward 4 9 0.0662526 Consensus sequence (original motif): GSMMCCYARGGKKKC Consensus sequence (reverse complement motif): GYRYCCMTKGGYRSC Alignment: GYRYCCMTKGGYRSC ---SCMVBBGGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 45 ESR1 Original Motif Reverse Complement Backward 2 9 0.067504 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV ----------GCCBBVRGS- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 88 ssCrCYyYCGss Original Motif Original Motif Backward 1 9 0.0711479 Consensus sequence (original motif): BBCRCCYCCGBB Consensus sequence (reverse complement motif): BBCGGKGGMGBB Alignment: BBCRCCYCCGBB ---GCCBBVRGS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 78 sssCGssGCsss Reverse Complement Original Motif Forward 1 9 0.0729061 Consensus sequence (original motif): SSSCGSSGCSSS Consensus sequence (reverse complement motif): SSSGCSSCGSSS Alignment: SSSCGSSGCSSS SCMVBBGGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 46 ESR2 Reverse Complement Reverse Complement Forward 6 9 0.0756036 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: BAGGYCABHBTGACCKHV -----SCMVBBGGC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 56 Mycn Reverse Complement Original Motif Forward 2 9 0.0775172 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: HSCACGTGGC -SCMVBBGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 61 Pax5 Original Motif Reverse Complement Forward 8 9 0.0805623 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD -------GCCBBVRGS---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 32 Motif name: SP1 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG ************************************************************************ Best Matches for Motif ID 32 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 91 ssCGCCsCCrCCCss Reverse Complement Reverse Complement Backward 6 10 0.030551 Consensus sequence (original motif): SSCGCCSCCGCCCSS Consensus sequence (reverse complement motif): SSGGGCGGSGGCGSS Alignment: SSGGGCGGSGGCGSS GGGGGYGGGG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 88 ssCrCYyYCGss Reverse Complement Reverse Complement Forward 1 10 0.061235 Consensus sequence (original motif): BBCRCCYCCGBB Consensus sequence (reverse complement motif): BBCGGKGGMGBB Alignment: BBCGGKGGMGBB GGGGGYGGGG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 89 ccCCmCACCcc Reverse Complement Reverse Complement Backward 2 10 0.0624534 Consensus sequence (original motif): HBCCMCACCHH Consensus sequence (reverse complement motif): DDGGTGRGGBD Alignment: DDGGTGRGGBD GGGGGYGGGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 RREB1 Reverse Complement Reverse Complement Forward 2 10 0.0646465 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: BGRRRGRGGRTGRTTYGGGG -GGGGGYGGGG--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 28 Zfx Reverse Complement Original Motif Backward 1 10 0.0664832 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV ----GGGGGYGGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 37 PLAG1 Original Motif Reverse Complement Backward 4 10 0.0725 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: CCCCCTTGGGCCCC -CCCCKCCCCC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 36 PPARGRXRA Original Motif Reverse Complement Backward 4 10 0.0731995 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: TGRCCTKTGHCCKAB --CCCCKCCCCC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 52 Klf4 Original Motif Reverse Complement Backward 1 10 0.0761191 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: GCCYCMCCCD CCCCKCCCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 ssGMsGRGCGss Reverse Complement Original Motif Forward 1 10 0.0766895 Consensus sequence (original motif): VVGCSGGGCGBB Consensus sequence (reverse complement motif): BBCGCCCSGCVV Alignment: VVGCSGGGCGBB GGGGGYGGGG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 93 rrAGGGGGArr Original Motif Reverse Complement Forward 2 10 0.0787709 Consensus sequence (original motif): VVAGGGGGAVV Consensus sequence (reverse complement motif): VVTCCCCCTVV Alignment: VVTCCCCCTVV -CCCCKCCCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 33 Motif name: RXRAVDR Consensus sequence (original motif): GGGTCAWBGRGTTCA Consensus sequence (reverse complement motif): TGAACKCBWTGACCC ************************************************************************ Best Matches for Motif ID 33 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 40 Ar Reverse Complement Original Motif Backward 5 15 0.0566667 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: HWDAGHACRHHVTGTHCCHVMV ---TGAACKCBWTGACCC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 46 ESR2 Original Motif Original Motif Forward 3 15 0.0617507 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: VHRGGTCABDBTGMCCTB --GGGTCAWBGRGTTCA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 63 RXRRAR_DR5 Original Motif Original Motif Backward 3 15 0.062029 Consensus sequence (original motif): RGKTCABVVRGAGGTCA Consensus sequence (reverse complement motif): TGACCTCKVVBTGAYCK Alignment: RGKTCABVVRGAGGTCA GGGTCAWBGRGTTCA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 45 ESR1 Reverse Complement Original Motif Backward 1 15 0.0714525 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY -----TGAACKCBWTGACCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 29 Zfp423 Reverse Complement Original Motif Forward 1 15 0.0849495 Consensus sequence (original motif): GSMMCCYARGGKKKC Consensus sequence (reverse complement motif): GYRYCCMTKGGYRSC Alignment: GSMMCCYARGGKKKC TGAACKCBWTGACCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 NR1H2RXRA Original Motif Original Motif Forward 3 15 0.0866667 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC --GGGTCAWBGRGTTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 37 PLAG1 Original Motif Original Motif Forward 2 13 1.06201 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: GGGGCCCAAGGGGG-- -GGGTCAWBGRGTTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 36 PPARGRXRA Original Motif Original Motif Forward 3 13 1.07837 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA-- --GGGTCAWBGRGTTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 50 HNF4A Original Motif Original Motif Forward 1 13 1.0801 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: RGGBCAAAGKYCA-- GGGTCAWBGRGTTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 38 NR2F1 Original Motif Reverse Complement Forward 2 13 1.08482 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: AKGYYCAAAGRTCA-- -GGGTCAWBGRGTTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 34 Motif name: RREB1 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG ************************************************************************ Best Matches for Motif ID 34 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 45 ESR1 Reverse Complement Reverse Complement Backward 2 19 0.0874679 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: -MGGTCAGGGTGACCTRDBHV BGRRRGRGGRTGRTTYGGGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 40 Ar Original Motif Original Motif Backward 4 19 0.0927532 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: -HWDAGHACRHHVTGTHCCHVMV CCCCMAAMCAMCCMCMMMCV--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 46 ESR2 Reverse Complement Reverse Complement Forward 1 18 0.593122 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: BAGGYCABHBTGACCKHV-- BGRRRGRGGRTGRTTYGGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 61 Pax5 Reverse Complement Original Motif Backward 4 17 1.09431 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: ---DGVBCABTGDWGCGKRRCSR BGRRRGRGGRTGRTTYGGGG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 91 ssCGCCsCCrCCCss Original Motif Original Motif Forward 1 15 2.08176 Consensus sequence (original motif): SSCGCCSCCGCCCSS Consensus sequence (reverse complement motif): SSGGGCGGSGGCGSS Alignment: SSCGCCSCCGCCCSS----- CCCCMAAMCAMCCMCMMMCV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 37 PLAG1 Original Motif Reverse Complement Forward 1 14 2.5804 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: CCCCCTTGGGCCCC------ CCCCMAAMCAMCCMCMMMCV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 25 Motif 25 Original Motif Original Motif Backward 1 14 2.58596 Consensus sequence (original motif): CACACAVRCACACA Consensus sequence (reverse complement motif): TGTGTGKVTGTGTG Alignment: ------CACACAVRCACACA CCCCMAAMCAMCCMCMMMCV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 75 yayAyAyACATrya Original Motif Original Motif Backward 1 14 2.5873 Consensus sequence (original motif): HACAYAYACATRHD Consensus sequence (reverse complement motif): DHKATGTKTKTGTD Alignment: ------HACAYAYACATRHD CCCCMAAMCAMCCMCMMMCV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 27 Motif 27 Original Motif Original Motif Backward 1 14 2.59077 Consensus sequence (original motif): CAYACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTKTG Alignment: ------CAYACACACACACA CCCCMAAMCAMCCMCMMMCV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 63 RXRRAR_DR5 Reverse Complement Original Motif Forward 5 13 3.07964 Consensus sequence (original motif): RGKTCABVVRGAGGTCA Consensus sequence (reverse complement motif): TGACCTCKVVBTGAYCK Alignment: RGKTCABVVRGAGGTCA------- ----BGRRRGRGGRTGRTTYGGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 35 Motif name: REST Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA ************************************************************************ Best Matches for Motif ID 35 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 40 Ar Reverse Complement Reverse Complement Backward 1 21 0.0685835 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: VRVDGGHACAVDDKGTHCTDWH -GGYGCTGTCCATGGTGCTGAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 61 Pax5 Reverse Complement Reverse Complement Forward 3 18 1.577 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD--- --GGYGCTGTCCATGGTGCTGAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 45 ESR1 Original Motif Original Motif Backward 5 16 2.56863 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: -----VDBHMAGGTCACCCTGACCY TTCAGCACCATGGACAGCKCC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 46 ESR2 Reverse Complement Reverse Complement Forward 6 13 4.05754 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: BAGGYCABHBTGACCKHV-------- -----GGYGCTGTCCATGGTGCTGAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 50 HNF4A Reverse Complement Reverse Complement Forward 1 13 4.06973 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: TGMYCTTTGBCCK-------- GGYGCTGTCCATGGTGCTGAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 36 PPARGRXRA Original Motif Original Motif Backward 3 13 4.07172 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: --------BTRGGDCARAGGKCA TTCAGCACCATGGACAGCKCC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 91 ssCGCCsCCrCCCss Reverse Complement Original Motif Forward 4 12 4.56521 Consensus sequence (original motif): SSCGCCSCCGCCCSS Consensus sequence (reverse complement motif): SSGGGCGGSGGCGSS Alignment: SSCGCCSCCGCCCSS--------- ---GGYGCTGTCCATGGTGCTGAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 ssGCTswGCCms Original Motif Original Motif Backward 1 12 4.56618 Consensus sequence (original motif): VBGCTSAGCCHB Consensus sequence (reverse complement motif): BDGGCTSAGCBV Alignment: ---------VBGCTSAGCCHB TTCAGCACCATGGACAGCKCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 88 ssCrCYyYCGss Reverse Complement Original Motif Forward 1 12 4.57063 Consensus sequence (original motif): BBCRCCYCCGBB Consensus sequence (reverse complement motif): BBCGGKGGMGBB Alignment: BBCRCCYCCGBB--------- GGYGCTGTCCATGGTGCTGAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 64 Tcfcp2l1 Reverse Complement Original Motif Forward 3 12 4.57098 Consensus sequence (original motif): CCAGYYHVADCCRG Consensus sequence (reverse complement motif): CKGGDTBDMMCTGG Alignment: CCAGYYHVADCCRG--------- --GGYGCTGTCCATGGTGCTGAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 36 Motif name: PPARGRXRA Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB ************************************************************************ Best Matches for Motif ID 36 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 NR1H2RXRA Original Motif Original Motif Backward 3 15 0.0442974 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC BTRGGDCARAGGKCA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 63 RXRRAR_DR5 Original Motif Original Motif Backward 1 15 0.0500583 Consensus sequence (original motif): RGKTCABVVRGAGGTCA Consensus sequence (reverse complement motif): TGACCTCKVVBTGAYCK Alignment: RGKTCABVVRGAGGTCA --BTRGGDCARAGGKCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 46 ESR2 Original Motif Original Motif Backward 4 15 0.0602408 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: VHRGGTCABDBTGMCCTB BTRGGDCARAGGKCA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 40 Ar Reverse Complement Original Motif Forward 8 15 0.0714981 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: HWDAGHACRHHVTGTHCCHVMV -------TGRCCTKTGHCCKAB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 61 Pax5 Reverse Complement Reverse Complement Backward 3 15 0.0720255 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD ---TGRCCTKTGHCCKAB-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 45 ESR1 Original Motif Original Motif Backward 3 15 0.0723092 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY ---BTRGGDCARAGGKCA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 RREB1 Reverse Complement Original Motif Forward 2 15 0.0755648 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: CCCCMAAMCAMCCMCMMMCV -TGRCCTKTGHCCKAB---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 REST Original Motif Original Motif Forward 2 15 0.0796159 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC -BTRGGDCARAGGKCA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 38 NR2F1 Reverse Complement Original Motif Forward 1 14 0.536521 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: TGAMCTTTGMMCYT- TGRCCTKTGHCCKAB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 37 PLAG1 Original Motif Original Motif Backward 1 14 0.575248 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: -GGGGCCCAAGGGGG BTRGGDCARAGGKCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 37 Motif name: PLAG1 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC ************************************************************************ Best Matches for Motif ID 37 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 29 Zfp423 Original Motif Original Motif Forward 1 14 0.0944264 Consensus sequence (original motif): GSMMCCYARGGKKKC Consensus sequence (reverse complement motif): GYRYCCMTKGGYRSC Alignment: GSMMCCYARGGKKKC GGGGCCCAAGGGGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 RREB1 Original Motif Reverse Complement Backward 7 14 0.102814 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: BGRRRGRGGRTGRTTYGGGG GGGGCCCAAGGGGG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 91 ssCGCCsCCrCCCss Reverse Complement Original Motif Forward 2 14 0.107124 Consensus sequence (original motif): SSCGCCSCCGCCCSS Consensus sequence (reverse complement motif): SSGGGCGGSGGCGSS Alignment: SSCGCCSCCGCCCSS -CCCCCTTGGGCCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 36 PPARGRXRA Original Motif Original Motif Forward 2 14 0.107206 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA -GGGGCCCAAGGGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 28 Zfx Original Motif Reverse Complement Forward 1 14 0.111315 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: VAGGCCBBGGCVBB GGGGCCCAAGGGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 64 Tcfcp2l1 Reverse Complement Original Motif Forward 1 14 0.115151 Consensus sequence (original motif): CCAGYYHVADCCRG Consensus sequence (reverse complement motif): CKGGDTBDMMCTGG Alignment: CCAGYYHVADCCRG CCCCCTTGGGCCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 63 RXRRAR_DR5 Original Motif Original Motif Backward 4 14 0.116287 Consensus sequence (original motif): RGKTCABVVRGAGGTCA Consensus sequence (reverse complement motif): TGACCTCKVVBTGAYCK Alignment: RGKTCABVVRGAGGTCA GGGGCCCAAGGGGG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 61 Pax5 Original Motif Original Motif Forward 1 14 0.117063 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR GGGGCCCAAGGGGG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 33 RXRAVDR Original Motif Original Motif Backward 3 13 0.590064 Consensus sequence (original motif): GGGTCAWBGRGTTCA Consensus sequence (reverse complement motif): TGAACKCBWTGACCC Alignment: -GGGTCAWBGRGTTCA GGGGCCCAAGGGGG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 50 HNF4A Original Motif Original Motif Backward 1 13 0.603385 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: -RGGBCAAAGKYCA GGGGCCCAAGGGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 38 Motif name: NR2F1 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA ************************************************************************ Best Matches for Motif ID 38 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 NR1H2RXRA Original Motif Reverse Complement Backward 2 14 0.0174588 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: GTTGACCTTTGACCTTT --TGAMCTTTGMMCYT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 36 PPARGRXRA Reverse Complement Original Motif Backward 2 14 0.0278283 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA AKGYYCAAAGRTCA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 63 RXRRAR_DR5 Reverse Complement Original Motif Backward 1 14 0.0625328 Consensus sequence (original motif): RGKTCABVVRGAGGTCA Consensus sequence (reverse complement motif): TGACCTCKVVBTGAYCK Alignment: RGKTCABVVRGAGGTCA ---AKGYYCAAAGRTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 97 ryayAyAyrtGTRTrTry Reverse Complement Reverse Complement Backward 5 14 0.0706629 Consensus sequence (original motif): DHAYAYAYRTGTGTRTDH Consensus sequence (reverse complement motif): HDAMACACAKKTKTKTHD Alignment: HDAMACACAKKTKTKTHD AKGYYCAAAGRTCA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 46 ESR2 Original Motif Reverse Complement Forward 4 14 0.0710475 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: BAGGYCABHBTGACCKHV ---TGAMCTTTGMMCYT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 REST Original Motif Reverse Complement Backward 6 14 0.071796 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA --TGAMCTTTGMMCYT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 61 Pax5 Original Motif Reverse Complement Forward 5 14 0.0741987 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD ----TGAMCTTTGMMCYT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 50 HNF4A Reverse Complement Original Motif Backward 1 13 0.514048 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: -RGGBCAAAGKYCA AKGYYCAAAGRTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 28 Zfx Reverse Complement Original Motif Forward 2 13 0.568042 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV- -AKGYYCAAAGRTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 45 ESR1 Original Motif Original Motif Forward 8 13 0.569869 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY- -------TGAMCTTTGMMCYT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 39 Motif name: MZF1_1-4 Consensus sequence (original motif): BGGGGA Consensus sequence (reverse complement motif): TCCCCV ************************************************************************ Best Matches for Motif ID 39 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 93 rrAGGGGGArr Reverse Complement Reverse Complement Forward 3 6 0.0136552 Consensus sequence (original motif): VVAGGGGGAVV Consensus sequence (reverse complement motif): VVTCCCCCTVV Alignment: VVTCCCCCTVV --TCCCCV--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 51 INSM1 Reverse Complement Reverse Complement Backward 5 6 0.0276389 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: MGCCCCCTGMCA --TCCCCV---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 MZF1_5-13 Original Motif Original Motif Backward 2 6 0.0314583 Consensus sequence (original motif): BKAGGGGDAD Consensus sequence (reverse complement motif): BTHCCCCTYB Alignment: BKAGGGGDAD ---BGGGGA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 89 ccCCmCACCcc Reverse Complement Original Motif Forward 2 6 0.03801 Consensus sequence (original motif): HBCCMCACCHH Consensus sequence (reverse complement motif): DDGGTGRGGBD Alignment: HBCCMCACCHH -TCCCCV---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 52 Klf4 Reverse Complement Reverse Complement Forward 1 6 0.0406514 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: GCCYCMCCCD TCCCCV---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 37 PLAG1 Original Motif Original Motif Forward 9 6 0.0412963 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: GGGGCCCAAGGGGG --------BGGGGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 24 Motif 24 Reverse Complement Reverse Complement Forward 1 6 0.0426517 Consensus sequence (original motif): CTGGGA Consensus sequence (reverse complement motif): TCCCAG Alignment: TCCCAG TCCCCV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 32 SP1 Original Motif Reverse Complement Forward 5 6 0.0464881 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: GGGGGYGGGG ----BGGGGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 91 ssCGCCsCCrCCCss Reverse Complement Original Motif Backward 1 6 0.047793 Consensus sequence (original motif): SSCGCCSCCGCCCSS Consensus sequence (reverse complement motif): SSGGGCGGSGGCGSS Alignment: SSCGCCSCCGCCCSS ---------TCCCCV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 RREB1 Reverse Complement Original Motif Forward 5 6 0.0493561 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: CCCCMAAMCAMCCMCMMMCV ----TCCCCV---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 40 Motif name: Ar Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH ************************************************************************ Best Matches for Motif ID 40 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 REST Reverse Complement Reverse Complement Backward 1 21 0.0696331 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: -GGYGCTGTCCATGGTGCTGAA VRVDGGHACAVDDKGTHCTDWH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 61 Pax5 Reverse Complement Reverse Complement Backward 1 20 0.564914 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: --MSGKKRCGCWDCABTGBBCD VRVDGGHACAVDDKGTHCTDWH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 45 ESR1 Reverse Complement Original Motif Forward 2 19 1.05195 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY--- -VRVDGGHACAVDDKGTHCTDWH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 RREB1 Original Motif Original Motif Forward 2 19 1.07661 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: CCCCMAAMCAMCCMCMMMCV--- -HWDAGHACRHHVTGTHCCHVMV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 97 ryayAyAyrtGTRTrTry Reverse Complement Reverse Complement Backward 1 18 1.57551 Consensus sequence (original motif): DHAYAYAYRTGTGTRTDH Consensus sequence (reverse complement motif): HDAMACACAKKTKTKTHD Alignment: ----HDAMACACAKKTKTKTHD VRVDGGHACAVDDKGTHCTDWH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 36 PPARGRXRA Reverse Complement Original Motif Backward 1 15 3.0649 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: -------BTRGGDCARAGGKCA VRVDGGHACAVDDKGTHCTDWH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 75 yayAyAyACATrya Reverse Complement Original Motif Forward 1 14 3.56216 Consensus sequence (original motif): HACAYAYACATRHD Consensus sequence (reverse complement motif): DHKATGTKTKTGTD Alignment: HACAYAYACATRHD-------- VRVDGGHACAVDDKGTHCTDWH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 46 ESR2 Reverse Complement Original Motif Backward 5 14 3.57597 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: --------VHRGGTCABDBTGMCCTB VRVDGGHACAVDDKGTHCTDWH---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 80 ssCwGGCCwGCss Original Motif Original Motif Backward 1 13 4.06081 Consensus sequence (original motif): BBCWGGCCAGCBB Consensus sequence (reverse complement motif): BBGCTGGCCWGBB Alignment: ---------BBCWGGCCAGCBB HWDAGHACRHHVTGTHCCHVMV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 50 HNF4A Original Motif Reverse Complement Backward 1 13 4.07506 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: ---------TGMYCTTTGBCCK HWDAGHACRHHVTGTHCCHVMV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 41 Motif name: Arnt Consensus sequence (original motif): CACGTG Consensus sequence (reverse complement motif): CACGTG ************************************************************************ Best Matches for Motif ID 41 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 47 Esrrb Original Motif Original Motif Backward 1 6 0 Consensus sequence (original motif): CACGTG Consensus sequence (reverse complement motif): CACGTG Alignment: CACGTG CACGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 55 MYCMAX Original Motif Original Motif Forward 4 6 0.0143849 Consensus sequence (original motif): RASCACGTGGT Consensus sequence (reverse complement motif): ACCACGTGSTM Alignment: RASCACGTGGT ---CACGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 54 Myc Original Motif Original Motif Forward 3 6 0.0267529 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: VGCACGTGGH --CACGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 56 Mycn Original Motif Original Motif Forward 3 6 0.0272641 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: HSCACGTGGC --CACGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 49 HIF1AARNT Reverse Complement Reverse Complement Forward 2 6 0.0347756 Consensus sequence (original motif): VBACGTGV Consensus sequence (reverse complement motif): VCACGTBV Alignment: VCACGTBV -CACGTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 42 ArntAhr Original Motif Original Motif Backward 1 6 0.065625 Consensus sequence (original motif): YGCGTG Consensus sequence (reverse complement motif): CACGCM Alignment: YGCGTG CACGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 30 ZEB1 Original Motif Reverse Complement Backward 1 6 0.0689533 Consensus sequence (original motif): CACCTD Consensus sequence (reverse complement motif): HAGGTG Alignment: HAGGTG CACGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 44 Egr1 Original Motif Original Motif Forward 1 6 0.0784722 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: HGCGTGGGCGK CACGTG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 97 ryayAyAyrtGTRTrTry Reverse Complement Original Motif Forward 6 6 0.0849165 Consensus sequence (original motif): DHAYAYAYRTGTGTRTDH Consensus sequence (reverse complement motif): HDAMACACAKKTKTKTHD Alignment: DHAYAYAYRTGTGTRTDH -----CACGTG------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 MIZF Original Motif Original Motif Backward 4 6 0.0854167 Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV Alignment: BAACGTCCGC -CACGTG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 42 Motif name: ArntAhr Consensus sequence (original motif): YGCGTG Consensus sequence (reverse complement motif): CACGCM ************************************************************************ Best Matches for Motif ID 42 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 44 Egr1 Reverse Complement Reverse Complement Backward 1 6 0.00801749 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: YCGCCCACGCH -----CACGCM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 49 HIF1AARNT Original Motif Original Motif Backward 2 6 0.0192621 Consensus sequence (original motif): VBACGTGV Consensus sequence (reverse complement motif): VCACGTBV Alignment: VBACGTGV -YGCGTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 27 Motif 27 Original Motif Reverse Complement Forward 7 6 0.0388571 Consensus sequence (original motif): CAYACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTKTG Alignment: TGTGTGTGTGTKTG ------YGCGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 47 Esrrb Original Motif Original Motif Backward 1 6 0.0396147 Consensus sequence (original motif): CACGTG Consensus sequence (reverse complement motif): CACGTG Alignment: CACGTG YGCGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 41 Arnt Original Motif Original Motif Forward 1 6 0.0396147 Consensus sequence (original motif): CACGTG Consensus sequence (reverse complement motif): CACGTG Alignment: CACGTG YGCGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 79 CACACACACACA Original Motif Reverse Complement Backward 7 6 0.0420782 Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG Alignment: TGTGTGTGTGTG YGCGTG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 25 Motif 25 Original Motif Reverse Complement Backward 9 6 0.0430749 Consensus sequence (original motif): CACACAVRCACACA Consensus sequence (reverse complement motif): TGTGTGKVTGTGTG Alignment: TGTGTGKVTGTGTG YGCGTG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 101 AAAAAAAAAAA Reverse Complement Original Motif Backward 7 6 0.043218 Consensus sequence (original motif): HVCATGCATGCABD Consensus sequence (reverse complement motif): DVTGCATGCATGBH Alignment: HVCATGCATGCABD --CACGCM------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 95 CACACACACACA Original Motif Reverse Complement Backward 3 6 0.0440329 Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG Alignment: TGTGTGTGTGTG ----YGCGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 55 MYCMAX Original Motif Original Motif Backward 3 6 0.0456663 Consensus sequence (original motif): RASCACGTGGT Consensus sequence (reverse complement motif): ACCACGTGSTM Alignment: RASCACGTGGT ---YGCGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 43 Motif name: E2F1 Consensus sequence (original motif): TTTSGCGC Consensus sequence (reverse complement motif): GCGCSAAA ************************************************************************ Best Matches for Motif ID 43 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 37 PLAG1 Original Motif Reverse Complement Forward 2 8 0.0610174 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: CCCCCTTGGGCCCC -TTTSGCGC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 36 PPARGRXRA Original Motif Reverse Complement Backward 6 8 0.0634966 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: TGRCCTKTGHCCKAB --TTTSGCGC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 50 HNF4A Reverse Complement Original Motif Forward 1 8 0.0638262 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: RGGBCAAAGKYCA GCGCSAAA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 NR1H2RXRA Reverse Complement Original Motif Forward 3 8 0.0652535 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC --GCGCSAAA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 38 NR2F1 Original Motif Original Motif Backward 2 8 0.0723689 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: TGAMCTTTGMMCYT -----TTTSGCGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 29 Zfp423 Reverse Complement Original Motif Backward 2 8 0.0778103 Consensus sequence (original motif): GSMMCCYARGGKKKC Consensus sequence (reverse complement motif): GYRYCCMTKGGYRSC Alignment: GSMMCCYARGGKKKC ------GCGCSAAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 92 tyTCTkTkTCyy Original Motif Original Motif Backward 1 8 0.0785178 Consensus sequence (original motif): BBTCTKTKTCHB Consensus sequence (reverse complement motif): VHGARAYAGAVV Alignment: BBTCTKTKTCHB ----TTTSGCGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 78 sssCGssGCsss Original Motif Reverse Complement Forward 3 8 0.078631 Consensus sequence (original motif): SSSCGSSGCSSS Consensus sequence (reverse complement motif): SSSGCSSCGSSS Alignment: SSSGCSSCGSSS --TTTSGCGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 ssGMsGRGCGss Reverse Complement Reverse Complement Forward 2 8 0.0796616 Consensus sequence (original motif): VVGCSGGGCGBB Consensus sequence (reverse complement motif): BBCGCCCSGCVV Alignment: BBCGCCCSGCVV -GCGCSAAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 69 aaACAAAACaa Reverse Complement Original Motif Backward 4 8 0.0816948 Consensus sequence (original motif): AAACAAAACAA Consensus sequence (reverse complement motif): TTGTTTTGTTT Alignment: AAACAAAACAA GCGCSAAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 44 Motif name: Egr1 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH ************************************************************************ Best Matches for Motif ID 44 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 88 ssCrCYyYCGss Original Motif Reverse Complement Forward 1 11 0.0247041 Consensus sequence (original motif): BBCRCCYCCGBB Consensus sequence (reverse complement motif): BBCGGKGGMGBB Alignment: BBCGGKGGMGBB HGCGTGGGCGK- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 91 ssCGCCsCCrCCCss Reverse Complement Original Motif Forward 2 11 0.0409098 Consensus sequence (original motif): SSCGCCSCCGCCCSS Consensus sequence (reverse complement motif): SSGGGCGGSGGCGSS Alignment: SSCGCCSCCGCCCSS -YCGCCCACGCH--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 RREB1 Original Motif Reverse Complement Backward 3 11 0.0550907 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: BGRRRGRGGRTGRTTYGGGG -------HGCGTGGGCGK-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 79 CACACACACACA Original Motif Reverse Complement Backward 2 11 0.0597938 Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG Alignment: TGTGTGTGTGTG HGCGTGGGCGK- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 95 CACACACACACA Original Motif Reverse Complement Forward 1 11 0.0606494 Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG Alignment: TGTGTGTGTGTG HGCGTGGGCGK- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 27 Motif 27 Reverse Complement Original Motif Forward 1 11 0.062391 Consensus sequence (original motif): CAYACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTKTG Alignment: CAYACACACACACA YCGCCCACGCH--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 89 ccCCmCACCcc Reverse Complement Original Motif Backward 1 11 0.0639546 Consensus sequence (original motif): HBCCMCACCHH Consensus sequence (reverse complement motif): DDGGTGRGGBD Alignment: HBCCMCACCHH YCGCCCACGCH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 ssGMsGRGCGss Original Motif Original Motif Backward 2 11 0.0665456 Consensus sequence (original motif): VVGCSGGGCGBB Consensus sequence (reverse complement motif): BBCGCCCSGCVV Alignment: VVGCSGGGCGBB HGCGTGGGCGK- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 25 Motif 25 Reverse Complement Original Motif Forward 1 11 0.0668604 Consensus sequence (original motif): CACACAVRCACACA Consensus sequence (reverse complement motif): TGTGTGKVTGTGTG Alignment: CACACAVRCACACA YCGCCCACGCH--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 29 Zfp423 Reverse Complement Original Motif Backward 2 11 0.0673496 Consensus sequence (original motif): GSMMCCYARGGKKKC Consensus sequence (reverse complement motif): GYRYCCMTKGGYRSC Alignment: GSMMCCYARGGKKKC ---YCGCCCACGCH- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 45 Motif name: ESR1 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV ************************************************************************ Best Matches for Motif ID 45 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 61 Pax5 Reverse Complement Reverse Complement Backward 1 20 0.0624908 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD MGGTCAGGGTGACCTRDBHV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 40 Ar Reverse Complement Original Motif Backward 4 19 0.556363 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: -HWDAGHACRHHVTGTHCCHVMV MGGTCAGGGTGACCTRDBHV--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 RREB1 Reverse Complement Reverse Complement Forward 2 19 0.575732 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: BGRRRGRGGRTGRTTYGGGG- -MGGTCAGGGTGACCTRDBHV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 46 ESR2 Original Motif Original Motif Backward 2 17 1.50287 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: ---VHRGGTCABDBTGMCCTB VDBHMAGGTCACCCTGACCY- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 63 RXRRAR_DR5 Original Motif Reverse Complement Backward 1 17 1.55839 Consensus sequence (original motif): RGKTCABVVRGAGGTCA Consensus sequence (reverse complement motif): TGACCTCKVVBTGAYCK Alignment: ---TGACCTCKVVBTGAYCK VDBHMAGGTCACCCTGACCY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 REST Original Motif Original Motif Forward 6 16 2.07409 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC---- -----VDBHMAGGTCACCCTGACCY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 33 RXRAVDR Reverse Complement Original Motif Backward 1 15 2.56536 Consensus sequence (original motif): GGGTCAWBGRGTTCA Consensus sequence (reverse complement motif): TGAACKCBWTGACCC Alignment: -----GGGTCAWBGRGTTCA MGGTCAGGGTGACCTRDBHV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 36 PPARGRXRA Original Motif Reverse Complement Backward 2 14 3.07055 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: ------TGRCCTKTGHCCKAB VDBHMAGGTCACCCTGACCY- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 91 ssCGCCsCCrCCCss Original Motif Reverse Complement Forward 2 14 3.07869 Consensus sequence (original motif): SSCGCCSCCGCCCSS Consensus sequence (reverse complement motif): SSGGGCGGSGGCGSS Alignment: SSGGGCGGSGGCGSS------ -VDBHMAGGTCACCCTGACCY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 101 AAAAAAAAAAA Reverse Complement Original Motif Backward 1 14 3.08388 Consensus sequence (original motif): HVCATGCATGCABD Consensus sequence (reverse complement motif): DVTGCATGCATGBH Alignment: ------HVCATGCATGCABD MGGTCAGGGTGACCTRDBHV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 46 Motif name: ESR2 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV ************************************************************************ Best Matches for Motif ID 46 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 40 Ar Reverse Complement Original Motif Forward 3 18 0.0488603 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: HWDAGHACRHHVTGTHCCHVMV --BAGGYCABHBTGACCKHV-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 61 Pax5 Reverse Complement Reverse Complement Backward 3 18 0.0851144 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD BAGGYCABHBTGACCKHV-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 RREB1 Reverse Complement Reverse Complement Backward 3 18 0.0903249 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: BGRRRGRGGRTGRTTYGGGG BAGGYCABHBTGACCKHV-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 REST Original Motif Reverse Complement Backward 3 18 0.0916961 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA -VHRGGTCABDBTGMCCTB-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 45 ESR1 Original Motif Original Motif Forward 4 17 0.511812 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY- ---VHRGGTCABDBTGMCCTB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 63 RXRRAR_DR5 Reverse Complement Original Motif Backward 1 17 0.570972 Consensus sequence (original motif): RGKTCABVVRGAGGTCA Consensus sequence (reverse complement motif): TGACCTCKVVBTGAYCK Alignment: -RGKTCABVVRGAGGTCA BAGGYCABHBTGACCKHV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 36 PPARGRXRA Original Motif Original Motif Forward 1 15 1.56699 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA--- VHRGGTCABDBTGMCCTB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 91 ssCGCCsCCrCCCss Original Motif Reverse Complement Forward 1 15 1.58524 Consensus sequence (original motif): SSCGCCSCCGCCCSS Consensus sequence (reverse complement motif): SSGGGCGGSGGCGSS Alignment: SSGGGCGGSGGCGSS--- VHRGGTCABDBTGMCCTB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 28 Zfx Reverse Complement Reverse Complement Forward 1 14 2.07891 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: VAGGCCBBGGCVBB---- BAGGYCABHBTGACCKHV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 38 NR2F1 Original Motif Original Motif Backward 1 14 2.08921 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: ----TGAMCTTTGMMCYT VHRGGTCABDBTGMCCTB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 47 Motif name: Esrrb Consensus sequence (original motif): CACGTG Consensus sequence (reverse complement motif): CACGTG ************************************************************************ Best Matches for Motif ID 47 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 41 Arnt Original Motif Original Motif Forward 1 6 0 Consensus sequence (original motif): CACGTG Consensus sequence (reverse complement motif): CACGTG Alignment: CACGTG CACGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 55 MYCMAX Reverse Complement Reverse Complement Forward 3 6 0.0143849 Consensus sequence (original motif): RASCACGTGGT Consensus sequence (reverse complement motif): ACCACGTGSTM Alignment: ACCACGTGSTM --CACGTG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 54 Myc Original Motif Original Motif Forward 3 6 0.0267529 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: VGCACGTGGH --CACGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 56 Mycn Reverse Complement Reverse Complement Backward 3 6 0.0272641 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: GCCACGTGSD --CACGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 49 HIF1AARNT Original Motif Original Motif Backward 2 6 0.0347756 Consensus sequence (original motif): VBACGTGV Consensus sequence (reverse complement motif): VCACGTBV Alignment: VBACGTGV -CACGTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 42 ArntAhr Original Motif Original Motif Forward 1 6 0.065625 Consensus sequence (original motif): YGCGTG Consensus sequence (reverse complement motif): CACGCM Alignment: YGCGTG CACGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 30 ZEB1 Reverse Complement Original Motif Forward 1 6 0.0689533 Consensus sequence (original motif): CACCTD Consensus sequence (reverse complement motif): HAGGTG Alignment: CACCTD CACGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 44 Egr1 Original Motif Original Motif Forward 1 6 0.0784722 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: HGCGTGGGCGK CACGTG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 97 ryayAyAyrtGTRTrTry Reverse Complement Original Motif Forward 6 6 0.0849165 Consensus sequence (original motif): DHAYAYAYRTGTGTRTDH Consensus sequence (reverse complement motif): HDAMACACAKKTKTKTHD Alignment: DHAYAYAYRTGTGTRTDH -----CACGTG------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 MIZF Original Motif Original Motif Backward 4 6 0.0854167 Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV Alignment: BAACGTCCGC -CACGTG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 48 Motif name: EWSR1-FLI1 Consensus sequence (original motif): GGAAGGAAGGAAGGAAGG Consensus sequence (reverse complement motif): CCTTCCTTCCTTCCTTCC ************************************************************************ Best Matches for Motif ID 48 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 NR1H2RXRA Original Motif Original Motif Backward 6 12 1.09472 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: ------AAAGGTCAAAGGTCAAC GGAAGGAAGGAAGGAAGG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 26 Motif 26 Reverse Complement Original Motif Backward 3 12 1.1007 Consensus sequence (original motif): TKKTTTGTTTTTTT Consensus sequence (reverse complement motif): AAAAAAACAAARRA Alignment: ------TKKTTTGTTTTTTT CCTTCCTTCCTTCCTTCC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 RREB1 Reverse Complement Original Motif Backward 11 10 2.09833 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: --------CCCCMAAMCAMCCMCMMMCV CCTTCCTTCCTTCCTTCC---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 32 SP1 Original Motif Reverse Complement Forward 2 9 2.58264 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: GGGGGYGGGG--------- -GGAAGGAAGGAAGGAAGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 93 rrAGGGGGArr Original Motif Original Motif Backward 3 9 2.59702 Consensus sequence (original motif): VVAGGGGGAVV Consensus sequence (reverse complement motif): VVTCCCCCTVV Alignment: ---------VVAGGGGGAVV GGAAGGAAGGAAGGAAGG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 13 Motif 13 Original Motif Original Motif Backward 1 8 3.07051 Consensus sequence (original motif): GAGRCAGR Consensus sequence (reverse complement motif): MCTGKCTC Alignment: ----------GAGRCAGR GGAAGGAAGGAAGGAAGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 4 Motif 4 Reverse Complement Original Motif Forward 1 8 3.07749 Consensus sequence (original motif): CYBCCTCC Consensus sequence (reverse complement motif): GGAGGVMG Alignment: CYBCCTCC---------- CCTTCCTTCCTTCCTTCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 68 dwCTTTTCwy Reverse Complement Original Motif Forward 3 8 3.08665 Consensus sequence (original motif): DHCTTTTCHH Consensus sequence (reverse complement motif): DHGAAAAGHD Alignment: DHCTTTTCHH---------- --CCTTCCTTCCTTCCTTCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 7 Motif 7 Original Motif Original Motif Forward 1 8 3.0889 Consensus sequence (original motif): ASASAGAA Consensus sequence (reverse complement motif): TTCTSTST Alignment: ASASAGAA---------- GGAAGGAAGGAAGGAAGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 9 Motif 9 Original Motif Original Motif Forward 1 8 3.08948 Consensus sequence (original motif): GCTGGGAW Consensus sequence (reverse complement motif): WTCCCAGC Alignment: GCTGGGAW---------- GGAAGGAAGGAAGGAAGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 49 Motif name: HIF1AARNT Consensus sequence (original motif): VBACGTGV Consensus sequence (reverse complement motif): VCACGTBV ************************************************************************ Best Matches for Motif ID 49 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 56 Mycn Original Motif Reverse Complement Backward 2 8 0.0228069 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: GCCACGTGSD -VBACGTGV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 54 Myc Original Motif Reverse Complement Forward 2 8 0.0249459 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: DCCACGTGCV -VBACGTGV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 55 MYCMAX Original Motif Original Motif Forward 3 8 0.0254922 Consensus sequence (original motif): RASCACGTGGT Consensus sequence (reverse complement motif): ACCACGTGSTM Alignment: RASCACGTGGT --VBACGTGV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 MIZF Reverse Complement Reverse Complement Forward 3 8 0.0482171 Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV Alignment: GCGGACGTTV --VCACGTBV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 40 Ar Original Motif Reverse Complement Backward 11 8 0.0533654 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: VRVDGGHACAVDDKGTHCTDWH ----VBACGTGV---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 75 yayAyAyACATrya Original Motif Original Motif Forward 6 8 0.0615181 Consensus sequence (original motif): HACAYAYACATRHD Consensus sequence (reverse complement motif): DHKATGTKTKTGTD Alignment: HACAYAYACATRHD -----VBACGTGV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 103 ccCCAGTGCAbr Reverse Complement Reverse Complement Forward 4 8 0.0642624 Consensus sequence (original motif): HVCCAGTGCABD Consensus sequence (reverse complement motif): DBTGCACTGGVD Alignment: DBTGCACTGGVD ---VCACGTBV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 61 Pax5 Reverse Complement Reverse Complement Backward 8 8 0.0661859 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD -----VCACGTBV------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 RREB1 Reverse Complement Original Motif Forward 6 8 0.0666776 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: CCCCMAAMCAMCCMCMMMCV -----VCACGTBV------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 101 AAAAAAAAAAA Original Motif Reverse Complement Forward 2 8 0.0666933 Consensus sequence (original motif): HVCATGCATGCABD Consensus sequence (reverse complement motif): DVTGCATGCATGBH Alignment: DVTGCATGCATGBH -VBACGTGV----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 50 Motif name: HNF4A Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK ************************************************************************ Best Matches for Motif ID 50 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 36 PPARGRXRA Original Motif Original Motif Forward 3 13 0 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA --RGGBCAAAGKYCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 38 NR2F1 Reverse Complement Original Motif Forward 2 13 0.0227413 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: TGAMCTTTGMMCYT -TGMYCTTTGBCCK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 NR1H2RXRA Original Motif Original Motif Backward 3 13 0.0423023 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC --RGGBCAAAGKYCA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 63 RXRRAR_DR5 Reverse Complement Reverse Complement Forward 1 13 0.048852 Consensus sequence (original motif): RGKTCABVVRGAGGTCA Consensus sequence (reverse complement motif): TGACCTCKVVBTGAYCK Alignment: TGACCTCKVVBTGAYCK TGMYCTTTGBCCK---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 61 Pax5 Original Motif Reverse Complement Forward 8 13 0.063924 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD -------RGGBCAAAGKYCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 46 ESR2 Original Motif Original Motif Forward 3 13 0.0671615 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: VHRGGTCABDBTGMCCTB --RGGBCAAAGKYCA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 40 Ar Reverse Complement Reverse Complement Backward 4 13 0.067775 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: VRVDGGHACAVDDKGTHCTDWH ------TGMYCTTTGBCCK--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 45 ESR1 Reverse Complement Original Motif Forward 1 13 0.0711137 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY TGMYCTTTGBCCK------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 37 PLAG1 Original Motif Original Motif Backward 1 13 0.0714266 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: GGGGCCCAAGGGGG -RGGBCAAAGKYCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 75 yayAyAyACATrya Reverse Complement Reverse Complement Forward 2 13 0.0734915 Consensus sequence (original motif): HACAYAYACATRHD Consensus sequence (reverse complement motif): DHKATGTKTKTGTD Alignment: DHKATGTKTKTGTD -TGMYCTTTGBCCK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 51 Motif name: INSM1 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA ************************************************************************ Best Matches for Motif ID 51 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 36 PPARGRXRA Original Motif Original Motif Forward 4 12 0.0472454 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA ---TGYCAGGGGGCR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 91 ssCGCCsCCrCCCss Reverse Complement Original Motif Backward 2 12 0.0477144 Consensus sequence (original motif): SSCGCCSCCGCCCSS Consensus sequence (reverse complement motif): SSGGGCGGSGGCGSS Alignment: SSCGCCSCCGCCCSS --MGCCCCCTGMCA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 RREB1 Original Motif Reverse Complement Forward 9 12 0.0499162 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: BGRRRGRGGRTGRTTYGGGG --------TGYCAGGGGGCR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 29 Zfp423 Reverse Complement Reverse Complement Backward 3 12 0.0538619 Consensus sequence (original motif): GSMMCCYARGGKKKC Consensus sequence (reverse complement motif): GYRYCCMTKGGYRSC Alignment: GYRYCCMTKGGYRSC -MGCCCCCTGMCA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 50 HNF4A Original Motif Original Motif Forward 2 12 0.0551858 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: RGGBCAAAGKYCA -TGYCAGGGGGCR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 ssGMsGRGCGss Reverse Complement Reverse Complement Forward 1 12 0.0598772 Consensus sequence (original motif): VVGCSGGGCGBB Consensus sequence (reverse complement motif): BBCGCCCSGCVV Alignment: BBCGCCCSGCVV MGCCCCCTGMCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 45 ESR1 Original Motif Original Motif Forward 2 12 0.0630846 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY -TGYCAGGGGGCR------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 95 CACACACACACA Original Motif Reverse Complement Backward 1 12 0.0673571 Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG Alignment: TGTGTGTGTGTG TGYCAGGGGGCR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 61 Pax5 Original Motif Original Motif Forward 6 12 0.0679087 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR -----TGYCAGGGGGCR--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 28 Zfx Reverse Complement Reverse Complement Backward 2 12 0.069037 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: VAGGCCBBGGCVBB -MGCCCCCTGMCA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 52 Motif name: Klf4 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD ************************************************************************ Best Matches for Motif ID 52 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 89 ccCCmCACCcc Original Motif Reverse Complement Forward 1 10 0.0387664 Consensus sequence (original motif): HBCCMCACCHH Consensus sequence (reverse complement motif): DDGGTGRGGBD Alignment: DDGGTGRGGBD DGGGYGKGGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 91 ssCGCCsCCrCCCss Original Motif Reverse Complement Forward 2 10 0.0433615 Consensus sequence (original motif): SSCGCCSCCGCCCSS Consensus sequence (reverse complement motif): SSGGGCGGSGGCGSS Alignment: SSGGGCGGSGGCGSS -DGGGYGKGGC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 RREB1 Original Motif Reverse Complement Backward 1 10 0.065355 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: BGRRRGRGGRTGRTTYGGGG ----------DGGGYGKGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 28 Zfx Reverse Complement Original Motif Backward 4 10 0.0734166 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV -GCCYCMCCCD--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 88 ssCrCYyYCGss Reverse Complement Original Motif Forward 1 10 0.0748311 Consensus sequence (original motif): BBCRCCYCCGBB Consensus sequence (reverse complement motif): BBCGGKGGMGBB Alignment: BBCRCCYCCGBB GCCYCMCCCD-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 32 SP1 Original Motif Reverse Complement Backward 1 10 0.0773711 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: GGGGGYGGGG DGGGYGKGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 27 Motif 27 Reverse Complement Original Motif Forward 3 10 0.0781179 Consensus sequence (original motif): CAYACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTKTG Alignment: CAYACACACACACA --GCCYCMCCCD-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 51 INSM1 Reverse Complement Reverse Complement Backward 1 10 0.0785684 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: MGCCCCCTGMCA --GCCYCMCCCD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 54 Myc Original Motif Original Motif Forward 1 10 0.0797423 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: VGCACGTGGH DGGGYGKGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 ssGCTswGCCms Reverse Complement Original Motif Backward 2 10 0.0798763 Consensus sequence (original motif): VBGCTSAGCCHB Consensus sequence (reverse complement motif): BDGGCTSAGCBV Alignment: VBGCTSAGCCHB -GCCYCMCCCD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 53 Motif name: MIZF Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV ************************************************************************ Best Matches for Motif ID 53 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 88 ssCrCYyYCGss Original Motif Original Motif Backward 2 10 0.0697975 Consensus sequence (original motif): BBCRCCYCCGBB Consensus sequence (reverse complement motif): BBCGGKGGMGBB Alignment: BBCRCCYCCGBB -BAACGTCCGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 55 MYCMAX Original Motif Reverse Complement Forward 2 10 0.0699702 Consensus sequence (original motif): RASCACGTGGT Consensus sequence (reverse complement motif): ACCACGTGSTM Alignment: ACCACGTGSTM -BAACGTCCGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 46 ESR2 Reverse Complement Reverse Complement Backward 1 10 0.0708456 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: BAGGYCABHBTGACCKHV --------GCGGACGTTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 45 ESR1 Original Motif Original Motif Backward 8 10 0.0717246 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY ---BAACGTCCGC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 82 rmACAGCAGsr Reverse Complement Reverse Complement Backward 1 10 0.0718896 Consensus sequence (original motif): VVACAGCAGVD Consensus sequence (reverse complement motif): DVCTGCTGTVB Alignment: DVCTGCTGTVB -GCGGACGTTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 40 Ar Original Motif Original Motif Backward 4 10 0.0741667 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: HWDAGHACRHHVTGTHCCHVMV ---------BAACGTCCGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 NR1H2RXRA Original Motif Original Motif Forward 8 10 0.074875 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC -------BAACGTCCGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 REST Original Motif Reverse Complement Backward 3 10 0.0810827 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA ---------BAACGTCCGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 87 ssCGGsYCGss Original Motif Original Motif Backward 2 10 0.0815371 Consensus sequence (original motif): BSCGGSCCGSV Consensus sequence (reverse complement motif): VSCGGSCCGSB Alignment: BSCGGSCCGSV BAACGTCCGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 80 ssCwGGCCwGCss Original Motif Original Motif Forward 2 10 0.0878113 Consensus sequence (original motif): BBCWGGCCAGCBB Consensus sequence (reverse complement motif): BBGCTGGCCWGBB Alignment: BBCWGGCCAGCBB -BAACGTCCGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 54 Motif name: Myc Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV ************************************************************************ Best Matches for Motif ID 54 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 56 Mycn Original Motif Original Motif Backward 1 10 0 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: HSCACGTGGC VGCACGTGGH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 55 MYCMAX Original Motif Original Motif Backward 1 10 0.0209359 Consensus sequence (original motif): RASCACGTGGT Consensus sequence (reverse complement motif): ACCACGTGSTM Alignment: RASCACGTGGT -VGCACGTGGH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 103 ccCCAGTGCAbr Reverse Complement Original Motif Backward 3 10 0.0708559 Consensus sequence (original motif): HVCCAGTGCABD Consensus sequence (reverse complement motif): DBTGCACTGGVD Alignment: HVCCAGTGCABD DCCACGTGCV-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 66 ssCGssCGss Original Motif Original Motif Backward 1 10 0.0820751 Consensus sequence (original motif): BSCGSSCGSV Consensus sequence (reverse complement motif): VSCGSSCGSB Alignment: BSCGSSCGSV VGCACGTGGH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 51 INSM1 Reverse Complement Reverse Complement Backward 2 10 0.0844808 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: MGCCCCCTGMCA -DCCACGTGCV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 65 ssCGrGCGss Original Motif Reverse Complement Backward 1 10 0.0859376 Consensus sequence (original motif): VSCGRGCGBV Consensus sequence (reverse complement motif): VBCGCMCGSV Alignment: VBCGCMCGSV VGCACGTGGH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 94 ssCGCksCGss Original Motif Original Motif Forward 1 10 0.0876214 Consensus sequence (original motif): VVCGCKSCGBB Consensus sequence (reverse complement motif): BBCGSRGCGVV Alignment: VVCGCKSCGBB VGCACGTGGH- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 52 Klf4 Original Motif Original Motif Backward 1 10 0.0883745 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: DGGGYGKGGC VGCACGTGGH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 ssCKCwsCGss Reverse Complement Reverse Complement Backward 1 10 0.0918906 Consensus sequence (original motif): BVCGCWSCGBV Consensus sequence (reverse complement motif): VBCGSWGCGVB Alignment: VBCGSWGCGVB -DCCACGTGCV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 28 Zfx Reverse Complement Reverse Complement Backward 2 10 0.0925451 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: VAGGCCBBGGCVBB ---DCCACGTGCV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 55 Motif name: MYCMAX Consensus sequence (original motif): RASCACGTGGT Consensus sequence (reverse complement motif): ACCACGTGSTM ************************************************************************ Best Matches for Motif ID 55 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 RREB1 Reverse Complement Original Motif Forward 4 11 0.0862644 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: CCCCMAAMCAMCCMCMMMCV ---ACCACGTGSTM------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 40 Ar Original Motif Original Motif Backward 10 11 0.0877525 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: HWDAGHACRHHVTGTHCCHVMV --RASCACGTGGT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 103 ccCCAGTGCAbr Reverse Complement Original Motif Backward 2 11 0.0902864 Consensus sequence (original motif): HVCCAGTGCABD Consensus sequence (reverse complement motif): DBTGCACTGGVD Alignment: HVCCAGTGCABD ACCACGTGSTM- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 29 Zfp423 Reverse Complement Original Motif Forward 2 11 0.0933483 Consensus sequence (original motif): GSMMCCYARGGKKKC Consensus sequence (reverse complement motif): GYRYCCMTKGGYRSC Alignment: GSMMCCYARGGKKKC -ACCACGTGSTM--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 37 PLAG1 Reverse Complement Reverse Complement Forward 1 11 0.10358 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: CCCCCTTGGGCCCC ACCACGTGSTM--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 51 INSM1 Original Motif Original Motif Forward 1 11 0.104527 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: TGYCAGGGGGCR RASCACGTGGT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 REST Reverse Complement Reverse Complement Backward 3 11 0.105174 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA --------ACCACGTGSTM-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 46 ESR2 Original Motif Original Motif Forward 4 11 0.105681 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: VHRGGTCABDBTGMCCTB ---RASCACGTGGT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 45 ESR1 Reverse Complement Reverse Complement Backward 2 11 0.107782 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV --------ACCACGTGSTM- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 63 RXRRAR_DR5 Reverse Complement Reverse Complement Forward 3 11 0.108615 Consensus sequence (original motif): RGKTCABVVRGAGGTCA Consensus sequence (reverse complement motif): TGACCTCKVVBTGAYCK Alignment: TGACCTCKVVBTGAYCK --ACCACGTGSTM---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 56 Motif name: Mycn Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD ************************************************************************ Best Matches for Motif ID 56 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 54 Myc Original Motif Original Motif Backward 1 10 0 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: VGCACGTGGH HSCACGTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 55 MYCMAX Original Motif Original Motif Forward 2 10 0.0200467 Consensus sequence (original motif): RASCACGTGGT Consensus sequence (reverse complement motif): ACCACGTGSTM Alignment: RASCACGTGGT -HSCACGTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 103 ccCCAGTGCAbr Reverse Complement Original Motif Forward 1 10 0.0746307 Consensus sequence (original motif): HVCCAGTGCABD Consensus sequence (reverse complement motif): DBTGCACTGGVD Alignment: HVCCAGTGCABD GCCACGTGSD-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 66 ssCGssCGss Original Motif Original Motif Forward 1 10 0.0794648 Consensus sequence (original motif): BSCGSSCGSV Consensus sequence (reverse complement motif): VSCGSSCGSB Alignment: BSCGSSCGSV HSCACGTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 65 ssCGrGCGss Original Motif Reverse Complement Forward 1 10 0.0833782 Consensus sequence (original motif): VSCGRGCGBV Consensus sequence (reverse complement motif): VBCGCMCGSV Alignment: VBCGCMCGSV HSCACGTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 51 INSM1 Reverse Complement Reverse Complement Backward 2 10 0.0834824 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: MGCCCCCTGMCA -GCCACGTGSD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 ssGMsGRGCGss Original Motif Reverse Complement Forward 1 10 0.0872684 Consensus sequence (original motif): VVGCSGGGCGBB Consensus sequence (reverse complement motif): BBCGCCCSGCVV Alignment: BBCGCCCSGCVV HSCACGTGGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 94 ssCGCksCGss Original Motif Original Motif Backward 2 10 0.0886917 Consensus sequence (original motif): VVCGCKSCGBB Consensus sequence (reverse complement motif): BBCGSRGCGVV Alignment: VVCGCKSCGBB HSCACGTGGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 52 Klf4 Original Motif Original Motif Forward 1 10 0.0893272 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: DGGGYGKGGC HSCACGTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 45 ESR1 Reverse Complement Reverse Complement Backward 3 10 0.089863 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV --------GCCACGTGSD-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 57 Motif name: MZF1_5-13 Consensus sequence (original motif): BKAGGGGDAD Consensus sequence (reverse complement motif): BTHCCCCTYB ************************************************************************ Best Matches for Motif ID 57 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 93 rrAGGGGGArr Original Motif Original Motif Forward 1 10 0.0129746 Consensus sequence (original motif): VVAGGGGGAVV Consensus sequence (reverse complement motif): VVTCCCCCTVV Alignment: VVAGGGGGAVV BKAGGGGDAD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 51 INSM1 Original Motif Original Motif Forward 3 10 0.0360532 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: TGYCAGGGGGCR --BKAGGGGDAD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 61 Pax5 Original Motif Original Motif Forward 8 10 0.0428241 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR -------BKAGGGGDAD--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 36 PPARGRXRA Original Motif Original Motif Forward 1 10 0.0470779 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA BKAGGGGDAD----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 29 Zfp423 Original Motif Original Motif Forward 6 10 0.0524832 Consensus sequence (original motif): GSMMCCYARGGKKKC Consensus sequence (reverse complement motif): GYRYCCMTKGGYRSC Alignment: GSMMCCYARGGKKKC -----BKAGGGGDAD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 RREB1 Reverse Complement Original Motif Backward 10 10 0.0548506 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: CCCCMAAMCAMCCMCMMMCV -BTHCCCCTYB--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 50 HNF4A Reverse Complement Reverse Complement Forward 1 10 0.0568244 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: TGMYCTTTGBCCK BTHCCCCTYB--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 63 RXRRAR_DR5 Reverse Complement Reverse Complement Forward 1 10 0.0581547 Consensus sequence (original motif): RGKTCABVVRGAGGTCA Consensus sequence (reverse complement motif): TGACCTCKVVBTGAYCK Alignment: TGACCTCKVVBTGAYCK BTHCCCCTYB------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 89 ccCCmCACCcc Original Motif Reverse Complement Backward 1 10 0.0584071 Consensus sequence (original motif): HBCCMCACCHH Consensus sequence (reverse complement motif): DDGGTGRGGBD Alignment: DDGGTGRGGBD -BKAGGGGDAD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 91 ssCGCCsCCrCCCss Original Motif Reverse Complement Forward 1 10 0.0606698 Consensus sequence (original motif): SSCGCCSCCGCCCSS Consensus sequence (reverse complement motif): SSGGGCGGSGGCGSS Alignment: SSGGGCGGSGGCGSS BKAGGGGDAD----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 58 Motif name: NFKB1 Consensus sequence (original motif): GGGGRTTCCCC Consensus sequence (reverse complement motif): GGGGAAKCCCC ************************************************************************ Best Matches for Motif ID 58 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 64 Tcfcp2l1 Original Motif Reverse Complement Backward 4 11 0.103405 Consensus sequence (original motif): CCAGYYHVADCCRG Consensus sequence (reverse complement motif): CKGGDTBDMMCTGG Alignment: CKGGDTBDMMCTGG GGGGRTTCCCC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 ssGCTswGCCms Reverse Complement Original Motif Forward 2 11 0.108087 Consensus sequence (original motif): VBGCTSAGCCHB Consensus sequence (reverse complement motif): BDGGCTSAGCBV Alignment: VBGCTSAGCCHB -GGGGAAKCCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 REST Reverse Complement Original Motif Forward 1 11 0.112926 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC GGGGAAKCCCC---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 91 ssCGCCsCCrCCCss Reverse Complement Original Motif Forward 4 11 0.113723 Consensus sequence (original motif): SSCGCCSCCGCCCSS Consensus sequence (reverse complement motif): SSGGGCGGSGGCGSS Alignment: SSCGCCSCCGCCCSS ---GGGGAAKCCCC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 61 Pax5 Reverse Complement Reverse Complement Forward 2 11 0.116162 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD -GGGGAAKCCCC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 RREB1 Reverse Complement Original Motif Forward 6 11 0.117826 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: CCCCMAAMCAMCCMCMMMCV -----GGGGAAKCCCC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 80 ssCwGGCCwGCss Reverse Complement Original Motif Forward 4 10 0.615517 Consensus sequence (original motif): BBCWGGCCAGCBB Consensus sequence (reverse complement motif): BBGCTGGCCWGBB Alignment: BBCWGGCCAGCBB- ---GGGGAAKCCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 52 Klf4 Original Motif Reverse Complement Forward 1 10 0.616368 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: GCCYCMCCCD- GGGGRTTCCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 70 mkARGCCACG Reverse Complement Original Motif Backward 2 9 1.10675 Consensus sequence (original motif): CKAGGCCACG Consensus sequence (reverse complement motif): CGTGGCCTYG Alignment: --CKAGGCCACG GGGGAAKCCCC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 37 PLAG1 Original Motif Original Motif Backward 6 9 1.11497 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: --GGGGCCCAAGGGGG GGGGRTTCCCC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 59 Motif name: NR1H2RXRA Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT ************************************************************************ Best Matches for Motif ID 59 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 REST Reverse Complement Reverse Complement Forward 4 17 0.0911991 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA ---GTTGACCTTTGACCTTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 36 PPARGRXRA Original Motif Original Motif Forward 1 15 1.05945 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA-- AAAGGTCAAAGGTCAAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 33 RXRAVDR Original Motif Original Motif Backward 1 15 1.09792 Consensus sequence (original motif): GGGTCAWBGRGTTCA Consensus sequence (reverse complement motif): TGAACKCBWTGACCC Alignment: --GGGTCAWBGRGTTCA AAAGGTCAAAGGTCAAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 45 ESR1 Original Motif Original Motif Backward 8 13 2.08514 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: ----VDBHMAGGTCACCCTGACCY AAAGGTCAAAGGTCAAC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 26 Motif 26 Reverse Complement Original Motif Forward 2 13 2.08845 Consensus sequence (original motif): TKKTTTGTTTTTTT Consensus sequence (reverse complement motif): AAAAAAACAAARRA Alignment: TKKTTTGTTTTTTT---- -GTTGACCTTTGACCTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 48 EWSR1-FLI1 Original Motif Original Motif Forward 7 12 2.59335 Consensus sequence (original motif): GGAAGGAAGGAAGGAAGG Consensus sequence (reverse complement motif): CCTTCCTTCCTTCCTTCC Alignment: GGAAGGAAGGAAGGAAGG----- ------AAAGGTCAAAGGTCAAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 40 Ar Reverse Complement Reverse Complement Forward 12 11 3.09595 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: VRVDGGHACAVDDKGTHCTDWH------ -----------GTTGACCTTTGACCTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 93 rrAGGGGGArr Original Motif Original Motif Forward 1 11 3.10003 Consensus sequence (original motif): VVAGGGGGAVV Consensus sequence (reverse complement motif): VVTCCCCCTVV Alignment: VVAGGGGGAVV------ AAAGGTCAAAGGTCAAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 46 ESR2 Original Motif Original Motif Backward 9 10 3.56221 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: -------VHRGGTCABDBTGMCCTB AAAGGTCAAAGGTCAAC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 70 mkARGCCACG Reverse Complement Reverse Complement Forward 1 10 3.57909 Consensus sequence (original motif): CKAGGCCACG Consensus sequence (reverse complement motif): CGTGGCCTYG Alignment: CGTGGCCTYG------- GTTGACCTTTGACCTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 60 Motif name: NR4A2 Consensus sequence (original motif): AAGGTCAC Consensus sequence (reverse complement motif): GTGACCTT ************************************************************************ Best Matches for Motif ID 60 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 NR1H2RXRA Original Motif Original Motif Backward 9 8 0.0167759 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC -AAGGTCAC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 45 ESR1 Original Motif Original Motif Forward 5 8 0.0195235 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY ----AAGGTCAC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 46 ESR2 Original Motif Original Motif Forward 2 8 0.0198372 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: VHRGGTCABDBTGMCCTB -AAGGTCAC--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 70 mkARGCCACG Reverse Complement Reverse Complement Backward 2 8 0.0377428 Consensus sequence (original motif): CKAGGCCACG Consensus sequence (reverse complement motif): CGTGGCCTYG Alignment: CGTGGCCTYG -GTGACCTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 40 Ar Reverse Complement Reverse Complement Forward 13 8 0.0487608 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: VRVDGGHACAVDDKGTHCTDWH ------------GTGACCTT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 36 PPARGRXRA Original Motif Original Motif Backward 7 8 0.0495607 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA -AAGGTCAC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 103 ccCCAGTGCAbr Reverse Complement Reverse Complement Backward 4 8 0.0555579 Consensus sequence (original motif): HVCCAGTGCABD Consensus sequence (reverse complement motif): DBTGCACTGGVD Alignment: DBTGCACTGGVD -GTGACCTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 38 NR2F1 Original Motif Reverse Complement Forward 7 8 0.0564874 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: AKGYYCAAAGRTCA ------AAGGTCAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 REST Reverse Complement Reverse Complement Forward 5 8 0.0594649 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA ----GTGACCTT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 28 Zfx Reverse Complement Original Motif Forward 1 8 0.0631514 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV GTGACCTT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 61 Motif name: Pax5 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD ************************************************************************ Best Matches for Motif ID 61 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 45 ESR1 Reverse Complement Reverse Complement Backward 1 20 0.040879 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV MSGKKRCGCWDCABTGBBCD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 40 Ar Reverse Complement Reverse Complement Backward 1 20 0.0477129 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: VRVDGGHACAVDDKGTHCTDWH --MSGKKRCGCWDCABTGBBCD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 46 ESR2 Reverse Complement Reverse Complement Forward 1 18 1.05456 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: BAGGYCABHBTGACCKHV-- MSGKKRCGCWDCABTGBBCD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 REST Reverse Complement Reverse Complement Backward 4 18 1.06085 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: --GGYGCTGTCCATGGTGCTGAA MSGKKRCGCWDCABTGBBCD--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 63 RXRRAR_DR5 Reverse Complement Reverse Complement Backward 1 17 1.54082 Consensus sequence (original motif): RGKTCABVVRGAGGTCA Consensus sequence (reverse complement motif): TGACCTCKVVBTGAYCK Alignment: ---TGACCTCKVVBTGAYCK MSGKKRCGCWDCABTGBBCD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 97 ryayAyAyrtGTRTrTry Original Motif Reverse Complement Forward 2 17 1.54834 Consensus sequence (original motif): DHAYAYAYRTGTGTRTDH Consensus sequence (reverse complement motif): HDAMACACAKKTKTKTHD Alignment: HDAMACACAKKTKTKTHD--- -DGVBCABTGDWGCGKRRCSR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 RREB1 Reverse Complement Original Motif Forward 4 17 1.56096 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: CCCCMAAMCAMCCMCMMMCV--- ---MSGKKRCGCWDCABTGBBCD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 36 PPARGRXRA Original Motif Reverse Complement Backward 1 15 2.55391 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: -----TGRCCTKTGHCCKAB DGVBCABTGDWGCGKRRCSR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 91 ssCGCCsCCrCCCss Reverse Complement Reverse Complement Forward 1 15 2.55604 Consensus sequence (original motif): SSCGCCSCCGCCCSS Consensus sequence (reverse complement motif): SSGGGCGGSGGCGSS Alignment: SSGGGCGGSGGCGSS----- MSGKKRCGCWDCABTGBBCD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 101 AAAAAAAAAAA Reverse Complement Original Motif Backward 1 14 3.05422 Consensus sequence (original motif): HVCATGCATGCABD Consensus sequence (reverse complement motif): DVTGCATGCATGBH Alignment: ------HVCATGCATGCABD MSGKKRCGCWDCABTGBBCD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 62 Motif name: RORA_1 Consensus sequence (original motif): AWVDAGGTCA Consensus sequence (reverse complement motif): TGACCTDVWT ************************************************************************ Best Matches for Motif ID 62 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 45 ESR1 Reverse Complement Reverse Complement Backward 2 10 0.0417851 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV ---------TGACCTDVWT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 33 RXRAVDR Original Motif Original Motif Backward 1 10 0.05325 Consensus sequence (original motif): GGGTCAWBGRGTTCA Consensus sequence (reverse complement motif): TGAACKCBWTGACCC Alignment: GGGTCAWBGRGTTCA -----AWVDAGGTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 NR1H2RXRA Original Motif Original Motif Forward 6 10 0.05425 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC -----AWVDAGGTCA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 63 RXRRAR_DR5 Reverse Complement Reverse Complement Forward 1 10 0.0600761 Consensus sequence (original motif): RGKTCABVVRGAGGTCA Consensus sequence (reverse complement motif): TGACCTCKVVBTGAYCK Alignment: TGACCTCKVVBTGAYCK TGACCTDVWT------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 38 NR2F1 Reverse Complement Original Motif Forward 5 10 0.0654808 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: TGAMCTTTGMMCYT ----TGACCTDVWT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 36 PPARGRXRA Original Motif Original Motif Backward 1 10 0.06668 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA -----AWVDAGGTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 REST Original Motif Original Motif Forward 7 10 0.0755608 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC ------AWVDAGGTCA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 50 HNF4A Original Motif Original Motif Forward 4 10 0.0803396 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: RGGBCAAAGKYCA ---AWVDAGGTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 40 Ar Original Motif Reverse Complement Forward 13 10 0.0814167 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: VRVDGGHACAVDDKGTHCTDWH ------------AWVDAGGTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 103 ccCCAGTGCAbr Reverse Complement Reverse Complement Backward 1 10 0.0826434 Consensus sequence (original motif): HVCCAGTGCABD Consensus sequence (reverse complement motif): DBTGCACTGGVD Alignment: DBTGCACTGGVD --TGACCTDVWT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 63 Motif name: RXRRAR_DR5 Consensus sequence (original motif): RGKTCABVVRGAGGTCA Consensus sequence (reverse complement motif): TGACCTCKVVBTGAYCK ************************************************************************ Best Matches for Motif ID 63 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 45 ESR1 Original Motif Reverse Complement Backward 1 17 0.0554256 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV ---RGKTCABVVRGAGGTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 46 ESR2 Reverse Complement Original Motif Forward 2 17 0.0590677 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: VHRGGTCABDBTGMCCTB -TGACCTCKVVBTGAYCK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 61 Pax5 Reverse Complement Reverse Complement Forward 4 17 0.0594693 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD ---TGACCTCKVVBTGAYCK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 40 Ar Reverse Complement Original Motif Backward 2 17 0.0751876 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: HWDAGHACRHHVTGTHCCHVMV ----TGACCTCKVVBTGAYCK- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 36 PPARGRXRA Original Motif Original Motif Backward 1 15 1.0449 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: --BTRGGDCARAGGKCA RGKTCABVVRGAGGTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 33 RXRAVDR Original Motif Original Motif Forward 1 15 1.05297 Consensus sequence (original motif): GGGTCAWBGRGTTCA Consensus sequence (reverse complement motif): TGAACKCBWTGACCC Alignment: GGGTCAWBGRGTTCA-- RGKTCABVVRGAGGTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 38 NR2F1 Reverse Complement Original Motif Backward 1 14 1.56607 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: ---TGAMCTTTGMMCYT TGACCTCKVVBTGAYCK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 37 PLAG1 Original Motif Original Motif Forward 1 14 1.57917 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: GGGGCCCAAGGGGG--- RGKTCABVVRGAGGTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 50 HNF4A Reverse Complement Reverse Complement Forward 1 13 2.0437 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: TGMYCTTTGBCCK---- TGACCTCKVVBTGAYCK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 RREB1 Reverse Complement Original Motif Backward 8 13 2.06494 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: ----CCCCMAAMCAMCCMCMMMCV TGACCTCKVVBTGAYCK------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 64 Motif name: Tcfcp2l1 Consensus sequence (original motif): CCAGYYHVADCCRG Consensus sequence (reverse complement motif): CKGGDTBDMMCTGG ************************************************************************ Best Matches for Motif ID 64 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 40 Ar Original Motif Original Motif Backward 3 14 0.0679942 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: HWDAGHACRHHVTGTHCCHVMV ------CCAGYYHVADCCRG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 45 ESR1 Original Motif Reverse Complement Forward 4 14 0.0713928 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV ---CCAGYYHVADCCRG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 28 Zfx Original Motif Original Motif Backward 1 14 0.0714852 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV CCAGYYHVADCCRG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 RREB1 Reverse Complement Reverse Complement Backward 2 14 0.0777364 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: BGRRRGRGGRTGRTTYGGGG -----CKGGDTBDMMCTGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 91 ssCGCCsCCrCCCss Original Motif Original Motif Forward 2 14 0.0779784 Consensus sequence (original motif): SSCGCCSCCGCCCSS Consensus sequence (reverse complement motif): SSGGGCGGSGGCGSS Alignment: SSCGCCSCCGCCCSS -CCAGYYHVADCCRG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 37 PLAG1 Reverse Complement Original Motif Backward 1 14 0.0817193 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: GGGGCCCAAGGGGG CKGGDTBDMMCTGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 46 ESR2 Reverse Complement Original Motif Backward 1 14 0.0828703 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: VHRGGTCABDBTGMCCTB ----CKGGDTBDMMCTGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 36 PPARGRXRA Reverse Complement Reverse Complement Forward 2 14 0.0829929 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: TGRCCTKTGHCCKAB -CKGGDTBDMMCTGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 61 Pax5 Reverse Complement Original Motif Forward 8 13 0.575635 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR- -------CKGGDTBDMMCTGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 63 RXRRAR_DR5 Reverse Complement Original Motif Forward 5 13 0.578477 Consensus sequence (original motif): RGKTCABVVRGAGGTCA Consensus sequence (reverse complement motif): TGACCTCKVVBTGAYCK Alignment: RGKTCABVVRGAGGTCA- ----CKGGDTBDMMCTGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 65 Motif name: ssCGrGCGss Consensus sequence (original motif): VSCGRGCGBV Consensus sequence (reverse complement motif): VBCGCMCGSV ************************************************************************ Best Matches for Motif ID 65 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 66 ssCGssCGss Reverse Complement Reverse Complement Forward 1 10 0 Consensus sequence (original motif): BSCGSSCGSV Consensus sequence (reverse complement motif): VSCGSSCGSB Alignment: VSCGSSCGSB VBCGCMCGSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 87 ssCGGsYCGss Reverse Complement Original Motif Forward 2 10 0.0380615 Consensus sequence (original motif): BSCGGSCCGSV Consensus sequence (reverse complement motif): VSCGGSCCGSB Alignment: BSCGGSCCGSV -VBCGCMCGSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 88 ssCrCYyYCGss Original Motif Reverse Complement Backward 3 10 0.0459192 Consensus sequence (original motif): BBCRCCYCCGBB Consensus sequence (reverse complement motif): BBCGGKGGMGBB Alignment: BBCGGKGGMGBB VSCGRGCGBV-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 90 ssCGsCwsCss Reverse Complement Original Motif Forward 1 10 0.0482532 Consensus sequence (original motif): BBCGSCWSCBB Consensus sequence (reverse complement motif): BBGSWGSCGBB Alignment: BBCGSCWSCBB VBCGCMCGSV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 ssGMsGRGCGss Original Motif Original Motif Backward 1 10 0.0487331 Consensus sequence (original motif): VVGCSGGGCGBB Consensus sequence (reverse complement motif): BBCGCCCSGCVV Alignment: VVGCSGGGCGBB --VSCGRGCGBV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 94 ssCGCksCGss Original Motif Reverse Complement Backward 1 10 0.0500566 Consensus sequence (original motif): VVCGCKSCGBB Consensus sequence (reverse complement motif): BBCGSRGCGVV Alignment: BBCGSRGCGVV -VSCGRGCGBV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 ssCGsCTCss Original Motif Reverse Complement Forward 1 10 0.0533306 Consensus sequence (original motif): VVCGSCTCBB Consensus sequence (reverse complement motif): BBGAGSCGVV Alignment: BBGAGSCGVV VSCGRGCGBV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 91 ssCGCCsCCrCCCss Reverse Complement Original Motif Backward 6 10 0.0556174 Consensus sequence (original motif): SSCGCCSCCGCCCSS Consensus sequence (reverse complement motif): SSGGGCGGSGGCGSS Alignment: SSCGCCSCCGCCCSS VBCGCMCGSV----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 ssCKCwsCGss Original Motif Reverse Complement Backward 1 10 0.0590467 Consensus sequence (original motif): BVCGCWSCGBV Consensus sequence (reverse complement motif): VBCGSWGCGVB Alignment: VBCGSWGCGVB -VSCGRGCGBV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 78 sssCGssGCsss Original Motif Reverse Complement Backward 2 10 0.0607038 Consensus sequence (original motif): SSSCGSSGCSSS Consensus sequence (reverse complement motif): SSSGCSSCGSSS Alignment: SSSGCSSCGSSS -VSCGRGCGBV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 66 Motif name: ssCGssCGss Consensus sequence (original motif): BSCGSSCGSV Consensus sequence (reverse complement motif): VSCGSSCGSB ************************************************************************ Best Matches for Motif ID 66 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 65 ssCGrGCGss Reverse Complement Reverse Complement Forward 1 10 0 Consensus sequence (original motif): VSCGRGCGBV Consensus sequence (reverse complement motif): VBCGCMCGSV Alignment: VBCGCMCGSV VSCGSSCGSB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 87 ssCGGsYCGss Original Motif Reverse Complement Forward 1 10 0.0371913 Consensus sequence (original motif): BSCGGSCCGSV Consensus sequence (reverse complement motif): VSCGGSCCGSB Alignment: VSCGGSCCGSB BSCGSSCGSV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 78 sssCGssGCsss Original Motif Original Motif Forward 2 10 0.0470049 Consensus sequence (original motif): SSSCGSSGCSSS Consensus sequence (reverse complement motif): SSSGCSSCGSSS Alignment: SSSCGSSGCSSS -BSCGSSCGSV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 90 ssCGsCwsCss Original Motif Reverse Complement Backward 1 10 0.049129 Consensus sequence (original motif): BBCGSCWSCBB Consensus sequence (reverse complement motif): BBGSWGSCGBB Alignment: BBGSWGSCGBB -BSCGSSCGSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 88 ssCrCYyYCGss Reverse Complement Original Motif Backward 1 10 0.0497103 Consensus sequence (original motif): BBCRCCYCCGBB Consensus sequence (reverse complement motif): BBCGGKGGMGBB Alignment: BBCRCCYCCGBB --VSCGSSCGSB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 ssCGsCTCss Original Motif Original Motif Backward 1 10 0.0521822 Consensus sequence (original motif): VVCGSCTCBB Consensus sequence (reverse complement motif): BBGAGSCGVV Alignment: VVCGSCTCBB BSCGSSCGSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 94 ssCGCksCGss Original Motif Original Motif Backward 1 10 0.0583987 Consensus sequence (original motif): VVCGCKSCGBB Consensus sequence (reverse complement motif): BBCGSRGCGVV Alignment: VVCGCKSCGBB -BSCGSSCGSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 91 ssCGCCsCCrCCCss Reverse Complement Original Motif Backward 6 10 0.0642479 Consensus sequence (original motif): SSCGCCSCCGCCCSS Consensus sequence (reverse complement motif): SSGGGCGGSGGCGSS Alignment: SSCGCCSCCGCCCSS VSCGSSCGSB----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 ssGMsGRGCGss Reverse Complement Original Motif Forward 3 10 0.0646516 Consensus sequence (original motif): VVGCSGGGCGBB Consensus sequence (reverse complement motif): BBCGCCCSGCVV Alignment: VVGCSGGGCGBB --VSCGSSCGSB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 56 Mycn Original Motif Original Motif Forward 1 10 0.0718705 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: HSCACGTGGC BSCGSSCGSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 67 Motif name: ssGMsGRGCGss Consensus sequence (original motif): VVGCSGGGCGBB Consensus sequence (reverse complement motif): BBCGCCCSGCVV ************************************************************************ Best Matches for Motif ID 67 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 88 ssCrCYyYCGss Original Motif Reverse Complement Forward 1 12 0.0191911 Consensus sequence (original motif): BBCRCCYCCGBB Consensus sequence (reverse complement motif): BBCGGKGGMGBB Alignment: BBCGGKGGMGBB VVGCSGGGCGBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 78 sssCGssGCsss Reverse Complement Reverse Complement Forward 1 12 0.0208422 Consensus sequence (original motif): SSSCGSSGCSSS Consensus sequence (reverse complement motif): SSSGCSSCGSSS Alignment: SSSGCSSCGSSS BBCGCCCSGCVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 ssGCTswGCCms Original Motif Original Motif Forward 1 12 0.0271966 Consensus sequence (original motif): VBGCTSAGCCHB Consensus sequence (reverse complement motif): BDGGCTSAGCBV Alignment: VBGCTSAGCCHB VVGCSGGGCGBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 28 Zfx Original Motif Original Motif Forward 3 12 0.0349435 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV --VVGCSGGGCGBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 91 ssCGCCsCCrCCCss Reverse Complement Original Motif Forward 2 12 0.0401057 Consensus sequence (original motif): SSCGCCSCCGCCCSS Consensus sequence (reverse complement motif): SSGGGCGGSGGCGSS Alignment: SSCGCCSCCGCCCSS -BBCGCCCSGCVV-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 61 Pax5 Original Motif Original Motif Forward 5 12 0.0452303 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR ----VVGCSGGGCGBB---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 103 ccCCAGTGCAbr Reverse Complement Reverse Complement Forward 1 12 0.046174 Consensus sequence (original motif): HVCCAGTGCABD Consensus sequence (reverse complement motif): DBTGCACTGGVD Alignment: DBTGCACTGGVD BBCGCCCSGCVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 45 ESR1 Original Motif Original Motif Forward 2 12 0.0464618 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY -VVGCSGGGCGBB------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 RREB1 Reverse Complement Original Motif Forward 3 12 0.046753 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: CCCCMAAMCAMCCMCMMMCV --BBCGCCCSGCVV------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 80 ssCwGGCCwGCss Reverse Complement Original Motif Backward 1 12 0.0498034 Consensus sequence (original motif): BBCWGGCCAGCBB Consensus sequence (reverse complement motif): BBGCTGGCCWGBB Alignment: BBCWGGCCAGCBB -BBCGCCCSGCVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 68 Motif name: dwCTTTTCwy Consensus sequence (original motif): DHCTTTTCHH Consensus sequence (reverse complement motif): DHGAAAAGHD ************************************************************************ Best Matches for Motif ID 68 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 71 wyATTTTAww Reverse Complement Reverse Complement Backward 1 10 0.00508721 Consensus sequence (original motif): DHATTTTADD Consensus sequence (reverse complement motif): DDTAAAATHD Alignment: DDTAAAATHD DHGAAAAGHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 81 wwTAAwAAww Reverse Complement Original Motif Backward 1 10 0.0148156 Consensus sequence (original motif): DDTAAWAAHH Consensus sequence (reverse complement motif): HHTTWTTADD Alignment: DDTAAWAAHH DHGAAAAGHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 76 wwWAAAAAwa Reverse Complement Original Motif Backward 1 10 0.0152278 Consensus sequence (original motif): WWAAAAAAWH Consensus sequence (reverse complement motif): HWTTTTTTWW Alignment: WWAAAAAAWH DHGAAAAGHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 83 wwTAAAwAww Reverse Complement Original Motif Backward 1 10 0.0196583 Consensus sequence (original motif): DDTAAAWAHH Consensus sequence (reverse complement motif): HHTWTTTADD Alignment: DDTAAAWAHH DHGAAAAGHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 85 wtATTTTTAww Reverse Complement Reverse Complement Backward 2 10 0.0226988 Consensus sequence (original motif): DHATTTTTADD Consensus sequence (reverse complement motif): DDTAAAAATHD Alignment: DDTAAAAATHD DHGAAAAGHD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 REST Original Motif Reverse Complement Forward 10 10 0.0242678 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA ---------DHCTTTTCHH-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 86 aaCAAAAACaa Original Motif Reverse Complement Forward 2 10 0.0309896 Consensus sequence (original motif): HHCAAAAACAH Consensus sequence (reverse complement motif): HTGTTTTTGHH Alignment: HTGTTTTTGHH -DHCTTTTCHH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 69 aaACAAAACaa Original Motif Reverse Complement Forward 1 10 0.0311578 Consensus sequence (original motif): AAACAAAACAA Consensus sequence (reverse complement motif): TTGTTTTGTTT Alignment: TTGTTTTGTTT DHCTTTTCHH- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 50 HNF4A Reverse Complement Original Motif Backward 2 10 0.03324 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: RGGBCAAAGKYCA --DHGAAAAGHD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 92 tyTCTkTkTCyy Original Motif Original Motif Forward 2 10 0.0365489 Consensus sequence (original motif): BBTCTKTKTCHB Consensus sequence (reverse complement motif): VHGARAYAGAVV Alignment: BBTCTKTKTCHB -DHCTTTTCHH- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 69 Motif name: aaACAAAACaa Consensus sequence (original motif): AAACAAAACAA Consensus sequence (reverse complement motif): TTGTTTTGTTT ************************************************************************ Best Matches for Motif ID 69 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 86 aaCAAAAACaa Reverse Complement Reverse Complement Backward 1 11 0.00867165 Consensus sequence (original motif): HHCAAAAACAH Consensus sequence (reverse complement motif): HTGTTTTTGHH Alignment: HTGTTTTTGHH TTGTTTTGTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 102 AAAAAAAAAAA Original Motif Original Motif Backward 1 11 0.0148063 Consensus sequence (original motif): AAAAAAAAAAA Consensus sequence (reverse complement motif): TTTTTTTTTTT Alignment: AAAAAAAAAAA AAACAAAACAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 26 Motif 26 Original Motif Reverse Complement Forward 1 11 0.0458549 Consensus sequence (original motif): TKKTTTGTTTTTTT Consensus sequence (reverse complement motif): AAAAAAACAAARRA Alignment: AAAAAAACAAARRA AAACAAAACAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 85 wtATTTTTAww Original Motif Reverse Complement Backward 1 11 0.046421 Consensus sequence (original motif): DHATTTTTADD Consensus sequence (reverse complement motif): DDTAAAAATHD Alignment: DDTAAAAATHD AAACAAAACAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 82 rmACAGCAGsr Original Motif Original Motif Backward 1 11 0.052053 Consensus sequence (original motif): VVACAGCAGVD Consensus sequence (reverse complement motif): DVCTGCTGTVB Alignment: VVACAGCAGVD AAACAAAACAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 RREB1 Original Motif Original Motif Backward 10 11 0.0556289 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: CCCCMAAMCAMCCMCMMMCV AAACAAAACAA--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 92 tyTCTkTkTCyy Reverse Complement Original Motif Forward 1 11 0.0592379 Consensus sequence (original motif): BBTCTKTKTCHB Consensus sequence (reverse complement motif): VHGARAYAGAVV Alignment: BBTCTKTKTCHB TTGTTTTGTTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 75 yayAyAyACATrya Reverse Complement Reverse Complement Forward 4 11 0.0600308 Consensus sequence (original motif): HACAYAYACATRHD Consensus sequence (reverse complement motif): DHKATGTKTKTGTD Alignment: DHKATGTKTKTGTD ---TTGTTTTGTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 97 ryayAyAyrtGTRTrTry Reverse Complement Reverse Complement Forward 8 11 0.0637357 Consensus sequence (original motif): DHAYAYAYRTGTGTRTDH Consensus sequence (reverse complement motif): HDAMACACAKKTKTKTHD Alignment: HDAMACACAKKTKTKTHD -------TTGTTTTGTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 79 CACACACACACA Original Motif Original Motif Forward 2 11 0.0656255 Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG Alignment: CACACACACACA -AAACAAAACAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 70 Motif name: mkARGCCACG Consensus sequence (original motif): CKAGGCCACG Consensus sequence (reverse complement motif): CGTGGCCTYG ************************************************************************ Best Matches for Motif ID 70 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 46 ESR2 Reverse Complement Reverse Complement Forward 9 10 0.0498081 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: BAGGYCABHBTGACCKHV --------CGTGGCCTYG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 45 ESR1 Reverse Complement Reverse Complement Backward 4 10 0.0634965 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV -------CGTGGCCTYG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 NR1H2RXRA Reverse Complement Reverse Complement Forward 1 10 0.0768331 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: GTTGACCTTTGACCTTT CGTGGCCTYG------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 36 PPARGRXRA Reverse Complement Reverse Complement Forward 6 10 0.0829671 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: TGRCCTKTGHCCKAB -----CGTGGCCTYG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 40 Ar Reverse Complement Reverse Complement Backward 2 10 0.0846072 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: VRVDGGHACAVDDKGTHCTDWH -----------CGTGGCCTYG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 37 PLAG1 Reverse Complement Original Motif Backward 1 10 0.0859542 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: GGGGCCCAAGGGGG ----CGTGGCCTYG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 RREB1 Reverse Complement Reverse Complement Backward 3 10 0.0865308 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: BGRRRGRGGRTGRTTYGGGG --------CGTGGCCTYG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 99 sgCTGGCCAGcs Original Motif Reverse Complement Forward 2 10 0.0870749 Consensus sequence (original motif): BBCTGGCCAGVV Consensus sequence (reverse complement motif): VVCTGGCCAGBB Alignment: VVCTGGCCAGBB -CKAGGCCACG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 80 ssCwGGCCwGCss Reverse Complement Reverse Complement Backward 2 10 0.0877916 Consensus sequence (original motif): BBCWGGCCAGCBB Consensus sequence (reverse complement motif): BBGCTGGCCWGBB Alignment: BBGCTGGCCWGBB --CGTGGCCTYG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 REST Reverse Complement Reverse Complement Forward 4 10 0.0882064 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA ---CGTGGCCTYG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 71 Motif name: wyATTTTAww Consensus sequence (original motif): DHATTTTADD Consensus sequence (reverse complement motif): DDTAAAATHD ************************************************************************ Best Matches for Motif ID 71 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 85 wtATTTTTAww Original Motif Original Motif Forward 1 10 0 Consensus sequence (original motif): DHATTTTTADD Consensus sequence (reverse complement motif): DDTAAAAATHD Alignment: DHATTTTTADD DHATTTTADD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 81 wwTAAwAAww Reverse Complement Original Motif Forward 1 10 0.00285443 Consensus sequence (original motif): DDTAAWAAHH Consensus sequence (reverse complement motif): HHTTWTTADD Alignment: DDTAAWAAHH DDTAAAATHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 83 wwTAAAwAww Reverse Complement Original Motif Forward 1 10 0.00437246 Consensus sequence (original motif): DDTAAAWAHH Consensus sequence (reverse complement motif): HHTWTTTADD Alignment: DDTAAAWAHH DDTAAAATHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 76 wwWAAAAAwa Reverse Complement Original Motif Forward 1 10 0.0153432 Consensus sequence (original motif): WWAAAAAAWH Consensus sequence (reverse complement motif): HWTTTTTTWW Alignment: WWAAAAAAWH DDTAAAATHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 68 dwCTTTTCwy Reverse Complement Reverse Complement Backward 1 10 0.0177129 Consensus sequence (original motif): DHCTTTTCHH Consensus sequence (reverse complement motif): DHGAAAAGHD Alignment: DHGAAAAGHD DDTAAAATHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 104 wtTTWwAAAaw Original Motif Reverse Complement Backward 2 10 0.0302024 Consensus sequence (original motif): HHTTTWAAADD Consensus sequence (reverse complement motif): DDTTTWAAAHH Alignment: DDTTTWAAAHH DHATTTTADD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 74 twTACATAvw Original Motif Reverse Complement Forward 1 10 0.0367109 Consensus sequence (original motif): HHTACATAVD Consensus sequence (reverse complement motif): DBTATGTAHH Alignment: DBTATGTAHH DHATTTTADD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 86 aaCAAAAACaa Reverse Complement Original Motif Forward 1 10 0.0372694 Consensus sequence (original motif): HHCAAAAACAH Consensus sequence (reverse complement motif): HTGTTTTTGHH Alignment: HHCAAAAACAH DDTAAAATHD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 69 aaACAAAACaa Reverse Complement Original Motif Backward 2 10 0.0401253 Consensus sequence (original motif): AAACAAAACAA Consensus sequence (reverse complement motif): TTGTTTTGTTT Alignment: AAACAAAACAA DDTAAAATHD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 102 AAAAAAAAAAA Original Motif Reverse Complement Backward 1 10 0.0513368 Consensus sequence (original motif): AAAAAAAAAAA Consensus sequence (reverse complement motif): TTTTTTTTTTT Alignment: TTTTTTTTTTT -DHATTTTADD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 72 Motif name: ssCKCwsCGss Consensus sequence (original motif): BVCGCWSCGBV Consensus sequence (reverse complement motif): VBCGSWGCGVB ************************************************************************ Best Matches for Motif ID 72 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 94 ssCGCksCGss Original Motif Original Motif Backward 1 11 0 Consensus sequence (original motif): VVCGCKSCGBB Consensus sequence (reverse complement motif): BBCGSRGCGVV Alignment: VVCGCKSCGBB BVCGCWSCGBV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 ssGMsGRGCGss Reverse Complement Original Motif Backward 2 11 0.0297341 Consensus sequence (original motif): VVGCSGGGCGBB Consensus sequence (reverse complement motif): BBCGCCCSGCVV Alignment: VVGCSGGGCGBB VBCGSWGCGVB- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 78 sssCGssGCsss Reverse Complement Original Motif Forward 2 11 0.0348528 Consensus sequence (original motif): SSSCGSSGCSSS Consensus sequence (reverse complement motif): SSSGCSSCGSSS Alignment: SSSCGSSGCSSS -VBCGSWGCGVB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 ssGCTswGCCms Original Motif Reverse Complement Forward 1 11 0.0369739 Consensus sequence (original motif): VBGCTSAGCCHB Consensus sequence (reverse complement motif): BDGGCTSAGCBV Alignment: BDGGCTSAGCBV BVCGCWSCGBV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 87 ssCGGsYCGss Original Motif Original Motif Forward 1 11 0.040396 Consensus sequence (original motif): BSCGGSCCGSV Consensus sequence (reverse complement motif): VSCGGSCCGSB Alignment: BSCGGSCCGSV BVCGCWSCGBV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 61 Pax5 Original Motif Reverse Complement Forward 6 11 0.049995 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD -----BVCGCWSCGBV---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 88 ssCrCYyYCGss Original Motif Original Motif Forward 1 11 0.0534664 Consensus sequence (original motif): BBCRCCYCCGBB Consensus sequence (reverse complement motif): BBCGGKGGMGBB Alignment: BBCRCCYCCGBB BVCGCWSCGBV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 91 ssCGCCsCCrCCCss Reverse Complement Reverse Complement Forward 5 11 0.0556993 Consensus sequence (original motif): SSCGCCSCCGCCCSS Consensus sequence (reverse complement motif): SSGGGCGGSGGCGSS Alignment: SSGGGCGGSGGCGSS ----VBCGSWGCGVB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 103 ccCCAGTGCAbr Reverse Complement Original Motif Forward 2 11 0.0575189 Consensus sequence (original motif): HVCCAGTGCABD Consensus sequence (reverse complement motif): DBTGCACTGGVD Alignment: HVCCAGTGCABD -VBCGSWGCGVB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 90 ssCGsCwsCss Original Motif Reverse Complement Forward 1 11 0.0590938 Consensus sequence (original motif): BBCGSCWSCBB Consensus sequence (reverse complement motif): BBGSWGSCGBB Alignment: BBGSWGSCGBB BVCGCWSCGBV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 73 Motif name: ssCGsCTCss Consensus sequence (original motif): VVCGSCTCBB Consensus sequence (reverse complement motif): BBGAGSCGVV ************************************************************************ Best Matches for Motif ID 73 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 90 ssCGsCwsCss Reverse Complement Reverse Complement Forward 2 10 0 Consensus sequence (original motif): BBCGSCWSCBB Consensus sequence (reverse complement motif): BBGSWGSCGBB Alignment: BBGSWGSCGBB -BBGAGSCGVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 78 sssCGssGCsss Original Motif Original Motif Backward 2 10 0.0108856 Consensus sequence (original motif): SSSCGSSGCSSS Consensus sequence (reverse complement motif): SSSGCSSCGSSS Alignment: SSSCGSSGCSSS -VVCGSCTCBB- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 94 ssCGCksCGss Reverse Complement Original Motif Forward 2 10 0.0139257 Consensus sequence (original motif): VVCGCKSCGBB Consensus sequence (reverse complement motif): BBCGSRGCGVV Alignment: VVCGCKSCGBB -BBGAGSCGVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 87 ssCGGsYCGss Original Motif Original Motif Backward 2 10 0.0162661 Consensus sequence (original motif): BSCGGSCCGSV Consensus sequence (reverse complement motif): VSCGGSCCGSB Alignment: BSCGGSCCGSV VVCGSCTCBB- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 91 ssCGCCsCCrCCCss Original Motif Original Motif Backward 6 10 0.0236639 Consensus sequence (original motif): SSCGCCSCCGCCCSS Consensus sequence (reverse complement motif): SSGGGCGGSGGCGSS Alignment: SSCGCCSCCGCCCSS VVCGSCTCBB----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 66 ssCGssCGss Original Motif Original Motif Backward 1 10 0.0241432 Consensus sequence (original motif): BSCGSSCGSV Consensus sequence (reverse complement motif): VSCGSSCGSB Alignment: BSCGSSCGSV VVCGSCTCBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 65 ssCGrGCGss Original Motif Reverse Complement Forward 1 10 0.0252915 Consensus sequence (original motif): VSCGRGCGBV Consensus sequence (reverse complement motif): VBCGCMCGSV Alignment: VBCGCMCGSV VVCGSCTCBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 ssGMsGRGCGss Original Motif Reverse Complement Forward 3 10 0.0315402 Consensus sequence (original motif): VVGCSGGGCGBB Consensus sequence (reverse complement motif): BBCGCCCSGCVV Alignment: BBCGCCCSGCVV --VVCGSCTCBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 ssCKCwsCGss Original Motif Reverse Complement Forward 2 10 0.0340702 Consensus sequence (original motif): BVCGCWSCGBV Consensus sequence (reverse complement motif): VBCGSWGCGVB Alignment: VBCGSWGCGVB -VVCGSCTCBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 88 ssCrCYyYCGss Original Motif Original Motif Forward 1 10 0.0353522 Consensus sequence (original motif): BBCRCCYCCGBB Consensus sequence (reverse complement motif): BBCGGKGGMGBB Alignment: BBCRCCYCCGBB VVCGSCTCBB-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 74 Motif name: twTACATAvw Consensus sequence (original motif): HHTACATAVD Consensus sequence (reverse complement motif): DBTATGTAHH ************************************************************************ Best Matches for Motif ID 74 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 83 wwTAAAwAww Reverse Complement Reverse Complement Backward 1 10 0.0257442 Consensus sequence (original motif): DDTAAAWAHH Consensus sequence (reverse complement motif): HHTWTTTADD Alignment: HHTWTTTADD DBTATGTAHH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 75 yayAyAyACATrya Original Motif Original Motif Forward 5 10 0.0533752 Consensus sequence (original motif): HACAYAYACATRHD Consensus sequence (reverse complement motif): DHKATGTKTKTGTD Alignment: HACAYAYACATRHD ----HHTACATAVD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 81 wwTAAwAAww Reverse Complement Reverse Complement Backward 1 10 0.0539475 Consensus sequence (original motif): DDTAAWAAHH Consensus sequence (reverse complement motif): HHTTWTTADD Alignment: HHTTWTTADD DBTATGTAHH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 85 wtATTTTTAww Reverse Complement Original Motif Forward 2 10 0.0566693 Consensus sequence (original motif): DHATTTTTADD Consensus sequence (reverse complement motif): DDTAAAAATHD Alignment: DHATTTTTADD -DBTATGTAHH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 71 wyATTTTAww Original Motif Reverse Complement Forward 1 10 0.0617069 Consensus sequence (original motif): DHATTTTADD Consensus sequence (reverse complement motif): DDTAAAATHD Alignment: DDTAAAATHD HHTACATAVD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 100 wrTGTATACAyw Reverse Complement Original Motif Backward 1 10 0.066134 Consensus sequence (original motif): HDTGTATACAHD Consensus sequence (reverse complement motif): DHTGTATACADH Alignment: HDTGTATACAHD --DBTATGTAHH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 97 ryayAyAyrtGTRTrTry Reverse Complement Original Motif Forward 8 10 0.0685784 Consensus sequence (original motif): DHAYAYAYRTGTGTRTDH Consensus sequence (reverse complement motif): HDAMACACAKKTKTKTHD Alignment: DHAYAYAYRTGTGTRTDH -------DBTATGTAHH- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 76 wwWAAAAAwa Reverse Complement Reverse Complement Forward 1 10 0.0689249 Consensus sequence (original motif): WWAAAAAAWH Consensus sequence (reverse complement motif): HWTTTTTTWW Alignment: HWTTTTTTWW DBTATGTAHH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 104 wtTTWwAAAaw Original Motif Original Motif Backward 1 10 0.0714832 Consensus sequence (original motif): HHTTTWAAADD Consensus sequence (reverse complement motif): DDTTTWAAAHH Alignment: HHTTTWAAADD -HHTACATAVD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 101 AAAAAAAAAAA Reverse Complement Original Motif Backward 1 10 0.0731139 Consensus sequence (original motif): HVCATGCATGCABD Consensus sequence (reverse complement motif): DVTGCATGCATGBH Alignment: HVCATGCATGCABD ----DBTATGTAHH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 75 Motif name: yayAyAyACATrya Consensus sequence (original motif): HACAYAYACATRHD Consensus sequence (reverse complement motif): DHKATGTKTKTGTD ************************************************************************ Best Matches for Motif ID 75 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 97 ryayAyAyrtGTRTrTry Original Motif Original Motif Backward 4 14 0.00454532 Consensus sequence (original motif): DHAYAYAYRTGTGTRTDH Consensus sequence (reverse complement motif): HDAMACACAKKTKTKTHD Alignment: DHAYAYAYRTGTGTRTDH -HACAYAYACATRHD--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 101 AAAAAAAAAAA Original Motif Original Motif Forward 1 14 0.0308807 Consensus sequence (original motif): HVCATGCATGCABD Consensus sequence (reverse complement motif): DVTGCATGCATGBH Alignment: HVCATGCATGCABD HACAYAYACATRHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 27 Motif 27 Original Motif Original Motif Forward 1 14 0.0331837 Consensus sequence (original motif): CAYACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTKTG Alignment: CAYACACACACACA HACAYAYACATRHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 25 Motif 25 Original Motif Original Motif Backward 1 14 0.0402474 Consensus sequence (original motif): CACACAVRCACACA Consensus sequence (reverse complement motif): TGTGTGKVTGTGTG Alignment: CACACAVRCACACA HACAYAYACATRHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 40 Ar Reverse Complement Original Motif Forward 1 14 0.0442476 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: HWDAGHACRHHVTGTHCCHVMV DHKATGTKTKTGTD-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 98 wwTAATTAATTAww Original Motif Original Motif Forward 1 14 0.0490963 Consensus sequence (original motif): HDTAATTAATTAHD Consensus sequence (reverse complement motif): DHTAATTAATTADH Alignment: HDTAATTAATTAHD HACAYAYACATRHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 26 Motif 26 Original Motif Reverse Complement Backward 1 14 0.0493713 Consensus sequence (original motif): TKKTTTGTTTTTTT Consensus sequence (reverse complement motif): AAAAAAACAAARRA Alignment: AAAAAAACAAARRA HACAYAYACATRHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 61 Pax5 Reverse Complement Original Motif Forward 5 14 0.0516607 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR ----DHKATGTKTKTGTD-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 RREB1 Original Motif Original Motif Forward 7 14 0.0532406 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: CCCCMAAMCAMCCMCMMMCV ------HACAYAYACATRHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 63 RXRRAR_DR5 Original Motif Original Motif Forward 3 14 0.0575008 Consensus sequence (original motif): RGKTCABVVRGAGGTCA Consensus sequence (reverse complement motif): TGACCTCKVVBTGAYCK Alignment: RGKTCABVVRGAGGTCA --HACAYAYACATRHD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 76 Motif name: wwWAAAAAwa Consensus sequence (original motif): WWAAAAAAWH Consensus sequence (reverse complement motif): HWTTTTTTWW ************************************************************************ Best Matches for Motif ID 76 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 85 wtATTTTTAww Reverse Complement Original Motif Backward 1 10 0.00795084 Consensus sequence (original motif): DHATTTTTADD Consensus sequence (reverse complement motif): DDTAAAAATHD Alignment: DHATTTTTADD -HWTTTTTTWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 81 wwTAAwAAww Original Motif Original Motif Forward 1 10 0.0105869 Consensus sequence (original motif): DDTAAWAAHH Consensus sequence (reverse complement motif): HHTTWTTADD Alignment: DDTAAWAAHH WWAAAAAAWH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 83 wwTAAAwAww Original Motif Original Motif Backward 1 10 0.0135165 Consensus sequence (original motif): DDTAAAWAHH Consensus sequence (reverse complement motif): HHTWTTTADD Alignment: DDTAAAWAHH WWAAAAAAWH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 102 AAAAAAAAAAA Reverse Complement Reverse Complement Forward 1 10 0.0137579 Consensus sequence (original motif): AAAAAAAAAAA Consensus sequence (reverse complement motif): TTTTTTTTTTT Alignment: TTTTTTTTTTT HWTTTTTTWW- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 86 aaCAAAAACaa Original Motif Original Motif Backward 2 10 0.0272712 Consensus sequence (original motif): HHCAAAAACAH Consensus sequence (reverse complement motif): HTGTTTTTGHH Alignment: HHCAAAAACAH WWAAAAAAWH- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 71 wyATTTTAww Reverse Complement Original Motif Forward 1 10 0.0288034 Consensus sequence (original motif): DHATTTTADD Consensus sequence (reverse complement motif): DDTAAAATHD Alignment: DHATTTTADD HWTTTTTTWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 69 aaACAAAACaa Original Motif Original Motif Forward 1 10 0.0387825 Consensus sequence (original motif): AAACAAAACAA Consensus sequence (reverse complement motif): TTGTTTTGTTT Alignment: AAACAAAACAA WWAAAAAAWH- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 104 wtTTWwAAAaw Original Motif Original Motif Backward 1 10 0.0395975 Consensus sequence (original motif): HHTTTWAAADD Consensus sequence (reverse complement motif): DDTTTWAAAHH Alignment: HHTTTWAAADD -WWAAAAAAWH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 68 dwCTTTTCwy Reverse Complement Original Motif Backward 1 10 0.0413137 Consensus sequence (original motif): DHCTTTTCHH Consensus sequence (reverse complement motif): DHGAAAAGHD Alignment: DHCTTTTCHH HWTTTTTTWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 26 Motif 26 Original Motif Reverse Complement Forward 1 10 0.0498611 Consensus sequence (original motif): TKKTTTGTTTTTTT Consensus sequence (reverse complement motif): AAAAAAACAAARRA Alignment: AAAAAAACAAARRA WWAAAAAAWH---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 77 Motif name: ssGCTswGCCms Consensus sequence (original motif): VBGCTSAGCCHB Consensus sequence (reverse complement motif): BDGGCTSAGCBV ************************************************************************ Best Matches for Motif ID 77 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 78 sssCGssGCsss Original Motif Original Motif Forward 1 12 0.0634646 Consensus sequence (original motif): SSSCGSSGCSSS Consensus sequence (reverse complement motif): SSSGCSSCGSSS Alignment: SSSCGSSGCSSS VBGCTSAGCCHB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 ssGMsGRGCGss Original Motif Original Motif Forward 1 12 0.0636848 Consensus sequence (original motif): VVGCSGGGCGBB Consensus sequence (reverse complement motif): BBCGCCCSGCVV Alignment: VVGCSGGGCGBB VBGCTSAGCCHB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 28 Zfx Original Motif Original Motif Forward 3 12 0.075549 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV --VBGCTSAGCCHB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 103 ccCCAGTGCAbr Reverse Complement Reverse Complement Forward 1 12 0.0787476 Consensus sequence (original motif): HVCCAGTGCABD Consensus sequence (reverse complement motif): DBTGCACTGGVD Alignment: DBTGCACTGGVD BDGGCTSAGCBV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 92 tyTCTkTkTCyy Original Motif Original Motif Forward 1 12 0.0787512 Consensus sequence (original motif): BBTCTKTKTCHB Consensus sequence (reverse complement motif): VHGARAYAGAVV Alignment: BBTCTKTKTCHB VBGCTSAGCCHB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 80 ssCwGGCCwGCss Original Motif Reverse Complement Forward 1 12 0.0821079 Consensus sequence (original motif): BBCWGGCCAGCBB Consensus sequence (reverse complement motif): BBGCTGGCCWGBB Alignment: BBGCTGGCCWGBB VBGCTSAGCCHB- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 REST Reverse Complement Original Motif Backward 9 12 0.082174 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC -BDGGCTSAGCBV-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 40 Ar Reverse Complement Reverse Complement Forward 3 12 0.0858473 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: VRVDGGHACAVDDKGTHCTDWH --BDGGCTSAGCBV-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 61 Pax5 Original Motif Reverse Complement Backward 1 12 0.08799 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD --------VBGCTSAGCCHB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 36 PPARGRXRA Reverse Complement Original Motif Backward 3 12 0.0909909 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA -BDGGCTSAGCBV-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 78 Motif name: sssCGssGCsss Consensus sequence (original motif): SSSCGSSGCSSS Consensus sequence (reverse complement motif): SSSGCSSCGSSS ************************************************************************ Best Matches for Motif ID 78 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 ssGMsGRGCGss Reverse Complement Reverse Complement Forward 1 12 0.0315939 Consensus sequence (original motif): VVGCSGGGCGBB Consensus sequence (reverse complement motif): BBCGCCCSGCVV Alignment: BBCGCCCSGCVV SSSGCSSCGSSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 ssGCTswGCCms Original Motif Original Motif Forward 1 12 0.0377281 Consensus sequence (original motif): VBGCTSAGCCHB Consensus sequence (reverse complement motif): BDGGCTSAGCBV Alignment: VBGCTSAGCCHB SSSCGSSGCSSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 91 ssCGCCsCCrCCCss Reverse Complement Reverse Complement Forward 2 12 0.0388517 Consensus sequence (original motif): SSCGCCSCCGCCCSS Consensus sequence (reverse complement motif): SSGGGCGGSGGCGSS Alignment: SSGGGCGGSGGCGSS -SSSGCSSCGSSS-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 28 Zfx Original Motif Original Motif Forward 3 12 0.0423285 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV --SSSCGSSGCSSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 88 ssCrCYyYCGss Reverse Complement Original Motif Backward 1 12 0.0430105 Consensus sequence (original motif): BBCRCCYCCGBB Consensus sequence (reverse complement motif): BBCGGKGGMGBB Alignment: BBCRCCYCCGBB SSSGCSSCGSSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 103 ccCCAGTGCAbr Original Motif Original Motif Forward 1 12 0.0624096 Consensus sequence (original motif): HVCCAGTGCABD Consensus sequence (reverse complement motif): DBTGCACTGGVD Alignment: HVCCAGTGCABD SSSCGSSGCSSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 45 ESR1 Original Motif Reverse Complement Backward 7 12 0.0679556 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV --SSSCGSSGCSSS------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 61 Pax5 Original Motif Original Motif Backward 5 12 0.0682726 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR ----SSSCGSSGCSSS---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 40 Ar Reverse Complement Original Motif Backward 11 12 0.0738808 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: HWDAGHACRHHVTGTHCCHVMV SSSGCSSCGSSS---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 99 sgCTGGCCAGcs Original Motif Original Motif Backward 1 12 0.0745276 Consensus sequence (original motif): BBCTGGCCAGVV Consensus sequence (reverse complement motif): VVCTGGCCAGBB Alignment: BBCTGGCCAGVV SSSCGSSGCSSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 79 Motif name: CACACACACACA Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG ************************************************************************ Best Matches for Motif ID 79 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 95 CACACACACACA Original Motif Original Motif Backward 1 12 0 Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG Alignment: CACACACACACA CACACACACACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 27 Motif 27 Reverse Complement Reverse Complement Backward 3 12 0.0113504 Consensus sequence (original motif): CAYACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTKTG Alignment: TGTGTGTGTGTKTG TGTGTGTGTGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 25 Motif 25 Original Motif Original Motif Forward 3 12 0.0320014 Consensus sequence (original motif): CACACAVRCACACA Consensus sequence (reverse complement motif): TGTGTGKVTGTGTG Alignment: CACACAVRCACACA --CACACACACACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 75 yayAyAyACATrya Original Motif Original Motif Backward 3 12 0.0651765 Consensus sequence (original motif): HACAYAYACATRHD Consensus sequence (reverse complement motif): DHKATGTKTKTGTD Alignment: HACAYAYACATRHD CACACACACACA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 97 ryayAyAyrtGTRTrTry Reverse Complement Original Motif Forward 6 12 0.0845978 Consensus sequence (original motif): DHAYAYAYRTGTGTRTDH Consensus sequence (reverse complement motif): HDAMACACAKKTKTKTHD Alignment: DHAYAYAYRTGTGTRTDH -----TGTGTGTGTGTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 92 tyTCTkTkTCyy Reverse Complement Original Motif Backward 1 12 0.0847238 Consensus sequence (original motif): BBTCTKTKTCHB Consensus sequence (reverse complement motif): VHGARAYAGAVV Alignment: BBTCTKTKTCHB TGTGTGTGTGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 101 AAAAAAAAAAA Original Motif Original Motif Forward 1 12 0.0887811 Consensus sequence (original motif): HVCATGCATGCABD Consensus sequence (reverse complement motif): DVTGCATGCATGBH Alignment: HVCATGCATGCABD CACACACACACA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 RREB1 Original Motif Original Motif Backward 5 12 0.0899886 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: CCCCMAAMCAMCCMCMMMCV ----CACACACACACA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 26 Motif 26 Original Motif Reverse Complement Backward 2 12 0.100107 Consensus sequence (original motif): TKKTTTGTTTTTTT Consensus sequence (reverse complement motif): AAAAAAACAAARRA Alignment: AAAAAAACAAARRA -CACACACACACA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 96 yrTGTGCACAyr Original Motif Original Motif Backward 1 12 0.102069 Consensus sequence (original motif): BVTGTGCACABV Consensus sequence (reverse complement motif): BBTGTGCACAVV Alignment: BVTGTGCACABV CACACACACACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 80 Motif name: ssCwGGCCwGCss Consensus sequence (original motif): BBCWGGCCAGCBB Consensus sequence (reverse complement motif): BBGCTGGCCWGBB ************************************************************************ Best Matches for Motif ID 80 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 45 ESR1 Reverse Complement Reverse Complement Forward 6 13 0.0567908 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV -----BBGCTGGCCWGBB-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 REST Original Motif Original Motif Backward 2 13 0.0602708 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC -------BBCWGGCCAGCBB- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 101 AAAAAAAAAAA Reverse Complement Reverse Complement Forward 2 13 0.0626373 Consensus sequence (original motif): HVCATGCATGCABD Consensus sequence (reverse complement motif): DVTGCATGCATGBH Alignment: DVTGCATGCATGBH -BBGCTGGCCWGBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 61 Pax5 Reverse Complement Reverse Complement Backward 3 13 0.0725196 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD -----BBGCTGGCCWGBB-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 40 Ar Original Motif Original Motif Forward 10 13 0.0752365 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: HWDAGHACRHHVTGTHCCHVMV ---------BBCWGGCCAGCBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 91 ssCGCCsCCrCCCss Reverse Complement Reverse Complement Forward 3 13 0.0852017 Consensus sequence (original motif): SSCGCCSCCGCCCSS Consensus sequence (reverse complement motif): SSGGGCGGSGGCGSS Alignment: SSGGGCGGSGGCGSS --BBGCTGGCCWGBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 RREB1 Reverse Complement Reverse Complement Backward 2 13 0.0853399 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: BGRRRGRGGRTGRTTYGGGG ------BBGCTGGCCWGBB- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 99 sgCTGGCCAGcs Original Motif Original Motif Forward 1 12 0.5 Consensus sequence (original motif): BBCTGGCCAGVV Consensus sequence (reverse complement motif): VVCTGGCCAGBB Alignment: BBCTGGCCAGVV- BBCWGGCCAGCBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 ssGCTswGCCms Original Motif Reverse Complement Forward 1 12 0.567169 Consensus sequence (original motif): VBGCTSAGCCHB Consensus sequence (reverse complement motif): BDGGCTSAGCBV Alignment: BDGGCTSAGCBV- BBCWGGCCAGCBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 103 ccCCAGTGCAbr Original Motif Reverse Complement Backward 1 12 0.56993 Consensus sequence (original motif): HVCCAGTGCABD Consensus sequence (reverse complement motif): DBTGCACTGGVD Alignment: -DBTGCACTGGVD BBCWGGCCAGCBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 81 Motif name: wwTAAwAAww Consensus sequence (original motif): DDTAAWAAHH Consensus sequence (reverse complement motif): HHTTWTTADD ************************************************************************ Best Matches for Motif ID 81 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 83 wwTAAAwAww Original Motif Original Motif Backward 1 10 0 Consensus sequence (original motif): DDTAAAWAHH Consensus sequence (reverse complement motif): HHTWTTTADD Alignment: DDTAAAWAHH DDTAAWAAHH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 85 wtATTTTTAww Reverse Complement Original Motif Backward 1 10 0.00383605 Consensus sequence (original motif): DHATTTTTADD Consensus sequence (reverse complement motif): DDTAAAAATHD Alignment: DHATTTTTADD -HHTTWTTADD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 76 wwWAAAAAwa Original Motif Original Motif Backward 1 10 0.0119297 Consensus sequence (original motif): WWAAAAAAWH Consensus sequence (reverse complement motif): HWTTTTTTWW Alignment: WWAAAAAAWH DDTAAWAAHH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 71 wyATTTTAww Reverse Complement Original Motif Forward 1 10 0.0176574 Consensus sequence (original motif): DHATTTTADD Consensus sequence (reverse complement motif): DDTAAAATHD Alignment: DHATTTTADD HHTTWTTADD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 104 wtTTWwAAAaw Original Motif Original Motif Backward 1 10 0.0376356 Consensus sequence (original motif): HHTTTWAAADD Consensus sequence (reverse complement motif): DDTTTWAAAHH Alignment: HHTTTWAAADD -DDTAAWAAHH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 86 aaCAAAAACaa Original Motif Original Motif Forward 1 10 0.0380114 Consensus sequence (original motif): HHCAAAAACAH Consensus sequence (reverse complement motif): HTGTTTTTGHH Alignment: HHCAAAAACAH DDTAAWAAHH- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 68 dwCTTTTCwy Reverse Complement Original Motif Backward 1 10 0.0422443 Consensus sequence (original motif): DHCTTTTCHH Consensus sequence (reverse complement motif): DHGAAAAGHD Alignment: DHCTTTTCHH HHTTWTTADD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 74 twTACATAvw Reverse Complement Reverse Complement Backward 1 10 0.0437545 Consensus sequence (original motif): HHTACATAVD Consensus sequence (reverse complement motif): DBTATGTAHH Alignment: DBTATGTAHH HHTTWTTADD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 98 wwTAATTAATTAww Reverse Complement Reverse Complement Backward 5 10 0.0451418 Consensus sequence (original motif): HDTAATTAATTAHD Consensus sequence (reverse complement motif): DHTAATTAATTADH Alignment: DHTAATTAATTADH HHTTWTTADD---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 102 AAAAAAAAAAA Reverse Complement Reverse Complement Backward 1 10 0.0493427 Consensus sequence (original motif): AAAAAAAAAAA Consensus sequence (reverse complement motif): TTTTTTTTTTT Alignment: TTTTTTTTTTT -HHTTWTTADD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 82 Motif name: rmACAGCAGsr Consensus sequence (original motif): VVACAGCAGVD Consensus sequence (reverse complement motif): DVCTGCTGTVB ************************************************************************ Best Matches for Motif ID 82 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 90 ssCGsCwsCss Original Motif Reverse Complement Forward 1 11 0.0342871 Consensus sequence (original motif): BBCGSCWSCBB Consensus sequence (reverse complement motif): BBGSWGSCGBB Alignment: BBGSWGSCGBB VVACAGCAGVD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 69 aaACAAAACaa Original Motif Original Motif Backward 1 11 0.0446457 Consensus sequence (original motif): AAACAAAACAA Consensus sequence (reverse complement motif): TTGTTTTGTTT Alignment: AAACAAAACAA VVACAGCAGVD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 61 Pax5 Reverse Complement Reverse Complement Backward 4 11 0.0606795 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD ------DVCTGCTGTVB--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 103 ccCCAGTGCAbr Reverse Complement Original Motif Backward 2 11 0.0611048 Consensus sequence (original motif): HVCCAGTGCABD Consensus sequence (reverse complement motif): DBTGCACTGGVD Alignment: HVCCAGTGCABD DVCTGCTGTVB- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 99 sgCTGGCCAGcs Original Motif Original Motif Forward 2 11 0.0617776 Consensus sequence (original motif): BBCTGGCCAGVV Consensus sequence (reverse complement motif): VVCTGGCCAGBB Alignment: BBCTGGCCAGVV -VVACAGCAGVD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 80 ssCwGGCCwGCss Reverse Complement Reverse Complement Forward 2 11 0.0619045 Consensus sequence (original motif): BBCWGGCCAGCBB Consensus sequence (reverse complement motif): BBGCTGGCCWGBB Alignment: BBGCTGGCCWGBB -DVCTGCTGTVB- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 46 ESR2 Original Motif Original Motif Forward 1 11 0.0619551 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: VHRGGTCABDBTGMCCTB VVACAGCAGVD------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 92 tyTCTkTkTCyy Original Motif Reverse Complement Forward 1 11 0.064093 Consensus sequence (original motif): BBTCTKTKTCHB Consensus sequence (reverse complement motif): VHGARAYAGAVV Alignment: VHGARAYAGAVV VVACAGCAGVD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 87 ssCGGsYCGss Reverse Complement Original Motif Forward 1 11 0.0648198 Consensus sequence (original motif): BSCGGSCCGSV Consensus sequence (reverse complement motif): VSCGGSCCGSB Alignment: BSCGGSCCGSV DVCTGCTGTVB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 88 ssCrCYyYCGss Original Motif Original Motif Backward 1 11 0.0649769 Consensus sequence (original motif): BBCRCCYCCGBB Consensus sequence (reverse complement motif): BBCGGKGGMGBB Alignment: BBCRCCYCCGBB -VVACAGCAGVD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 83 Motif name: wwTAAAwAww Consensus sequence (original motif): DDTAAAWAHH Consensus sequence (reverse complement motif): HHTWTTTADD ************************************************************************ Best Matches for Motif ID 83 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 81 wwTAAwAAww Original Motif Original Motif Backward 1 10 0 Consensus sequence (original motif): DDTAAWAAHH Consensus sequence (reverse complement motif): HHTTWTTADD Alignment: DDTAAWAAHH DDTAAAWAHH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 85 wtATTTTTAww Original Motif Reverse Complement Forward 1 10 0.00769202 Consensus sequence (original motif): DHATTTTTADD Consensus sequence (reverse complement motif): DDTAAAAATHD Alignment: DDTAAAAATHD DDTAAAWAHH- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 76 wwWAAAAAwa Original Motif Original Motif Backward 1 10 0.0148593 Consensus sequence (original motif): WWAAAAAAWH Consensus sequence (reverse complement motif): HWTTTTTTWW Alignment: WWAAAAAAWH DDTAAAWAHH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 74 twTACATAvw Reverse Complement Reverse Complement Backward 1 10 0.0155512 Consensus sequence (original motif): HHTACATAVD Consensus sequence (reverse complement motif): DBTATGTAHH Alignment: DBTATGTAHH HHTWTTTADD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 71 wyATTTTAww Reverse Complement Original Motif Forward 1 10 0.0191754 Consensus sequence (original motif): DHATTTTADD Consensus sequence (reverse complement motif): DDTAAAATHD Alignment: DHATTTTADD HHTWTTTADD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 86 aaCAAAAACaa Original Motif Original Motif Forward 1 10 0.0386588 Consensus sequence (original motif): HHCAAAAACAH Consensus sequence (reverse complement motif): HTGTTTTTGHH Alignment: HHCAAAAACAH DDTAAAWAHH- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 104 wtTTWwAAAaw Original Motif Original Motif Forward 2 10 0.0400542 Consensus sequence (original motif): HHTTTWAAADD Consensus sequence (reverse complement motif): DDTTTWAAAHH Alignment: HHTTTWAAADD -DDTAAAWAHH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 98 wwTAATTAATTAww Reverse Complement Reverse Complement Backward 5 10 0.0425216 Consensus sequence (original motif): HDTAATTAATTAHD Consensus sequence (reverse complement motif): DHTAATTAATTADH Alignment: DHTAATTAATTADH HHTWTTTADD---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 68 dwCTTTTCwy Reverse Complement Original Motif Backward 1 10 0.0470869 Consensus sequence (original motif): DHCTTTTCHH Consensus sequence (reverse complement motif): DHGAAAAGHD Alignment: DHCTTTTCHH HHTWTTTADD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 102 AAAAAAAAAAA Original Motif Original Motif Forward 1 10 0.0497246 Consensus sequence (original motif): AAAAAAAAAAA Consensus sequence (reverse complement motif): TTTTTTTTTTT Alignment: AAAAAAAAAAA DDTAAAWAHH- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 84 Motif name: wsAGCTACwy Consensus sequence (original motif): DVAGCTACHB Consensus sequence (reverse complement motif): VHGTAGCTVD ************************************************************************ Best Matches for Motif ID 84 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 40 Ar Reverse Complement Original Motif Forward 2 10 0.0406295 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: HWDAGHACRHHVTGTHCCHVMV -VHGTAGCTVD----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 REST Reverse Complement Reverse Complement Forward 11 10 0.0488771 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA ----------VHGTAGCTVD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 61 Pax5 Reverse Complement Original Motif Forward 5 10 0.0490165 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR ----VHGTAGCTVD------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 94 ssCGCksCGss Reverse Complement Reverse Complement Backward 1 10 0.0498691 Consensus sequence (original motif): VVCGCKSCGBB Consensus sequence (reverse complement motif): BBCGSRGCGVV Alignment: BBCGSRGCGVV -VHGTAGCTVD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 ssCKCwsCGss Reverse Complement Reverse Complement Backward 1 10 0.0504682 Consensus sequence (original motif): BVCGCWSCGBV Consensus sequence (reverse complement motif): VBCGSWGCGVB Alignment: VBCGSWGCGVB -VHGTAGCTVD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 82 rmACAGCAGsr Original Motif Reverse Complement Backward 2 10 0.0522604 Consensus sequence (original motif): VVACAGCAGVD Consensus sequence (reverse complement motif): DVCTGCTGTVB Alignment: DVCTGCTGTVB DVAGCTACHB- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 86 aaCAAAAACaa Original Motif Original Motif Backward 1 10 0.0552268 Consensus sequence (original motif): HHCAAAAACAH Consensus sequence (reverse complement motif): HTGTTTTTGHH Alignment: HHCAAAAACAH -DVAGCTACHB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 90 ssCGsCwsCss Reverse Complement Reverse Complement Backward 2 10 0.0555094 Consensus sequence (original motif): BBCGSCWSCBB Consensus sequence (reverse complement motif): BBGSWGSCGBB Alignment: BBGSWGSCGBB VHGTAGCTVD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 97 ryayAyAyrtGTRTrTry Reverse Complement Original Motif Forward 9 10 0.0576734 Consensus sequence (original motif): DHAYAYAYRTGTGTRTDH Consensus sequence (reverse complement motif): HDAMACACAKKTKTKTHD Alignment: DHAYAYAYRTGTGTRTDH --------VHGTAGCTVD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 ssCGsCTCss Reverse Complement Reverse Complement Forward 1 10 0.0593588 Consensus sequence (original motif): VVCGSCTCBB Consensus sequence (reverse complement motif): BBGAGSCGVV Alignment: BBGAGSCGVV VHGTAGCTVD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 85 Motif name: wtATTTTTAww Consensus sequence (original motif): DHATTTTTADD Consensus sequence (reverse complement motif): DDTAAAAATHD ************************************************************************ Best Matches for Motif ID 85 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 86 aaCAAAAACaa Original Motif Reverse Complement Forward 1 11 0.0261531 Consensus sequence (original motif): HHCAAAAACAH Consensus sequence (reverse complement motif): HTGTTTTTGHH Alignment: HTGTTTTTGHH DHATTTTTADD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 104 wtTTWwAAAaw Reverse Complement Original Motif Backward 1 11 0.0418871 Consensus sequence (original motif): HHTTTWAAADD Consensus sequence (reverse complement motif): DDTTTWAAAHH Alignment: HHTTTWAAADD DDTAAAAATHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 102 AAAAAAAAAAA Original Motif Reverse Complement Backward 1 11 0.0435465 Consensus sequence (original motif): AAAAAAAAAAA Consensus sequence (reverse complement motif): TTTTTTTTTTT Alignment: TTTTTTTTTTT DHATTTTTADD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 69 aaACAAAACaa Reverse Complement Original Motif Forward 1 11 0.0554976 Consensus sequence (original motif): AAACAAAACAA Consensus sequence (reverse complement motif): TTGTTTTGTTT Alignment: AAACAAAACAA DDTAAAAATHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 92 tyTCTkTkTCyy Original Motif Original Motif Forward 2 11 0.0619608 Consensus sequence (original motif): BBTCTKTKTCHB Consensus sequence (reverse complement motif): VHGARAYAGAVV Alignment: BBTCTKTKTCHB -DHATTTTTADD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 98 wwTAATTAATTAww Reverse Complement Original Motif Backward 4 11 0.071067 Consensus sequence (original motif): HDTAATTAATTAHD Consensus sequence (reverse complement motif): DHTAATTAATTADH Alignment: HDTAATTAATTAHD DDTAAAAATHD--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 38 NR2F1 Reverse Complement Reverse Complement Backward 1 11 0.073779 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: AKGYYCAAAGRTCA ---DDTAAAAATHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 26 Motif 26 Original Motif Original Motif Forward 2 11 0.0743375 Consensus sequence (original motif): TKKTTTGTTTTTTT Consensus sequence (reverse complement motif): AAAAAAACAAARRA Alignment: TKKTTTGTTTTTTT -DHATTTTTADD-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 75 yayAyAyACATrya Reverse Complement Original Motif Forward 4 11 0.0781372 Consensus sequence (original motif): HACAYAYACATRHD Consensus sequence (reverse complement motif): DHKATGTKTKTGTD Alignment: HACAYAYACATRHD ---DDTAAAAATHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 97 ryayAyAyrtGTRTrTry Original Motif Reverse Complement Forward 7 11 0.078844 Consensus sequence (original motif): DHAYAYAYRTGTGTRTDH Consensus sequence (reverse complement motif): HDAMACACAKKTKTKTHD Alignment: HDAMACACAKKTKTKTHD ------DHATTTTTADD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 86 Motif name: aaCAAAAACaa Consensus sequence (original motif): HHCAAAAACAH Consensus sequence (reverse complement motif): HTGTTTTTGHH ************************************************************************ Best Matches for Motif ID 86 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 69 aaACAAAACaa Reverse Complement Reverse Complement Backward 1 11 0.00599723 Consensus sequence (original motif): AAACAAAACAA Consensus sequence (reverse complement motif): TTGTTTTGTTT Alignment: TTGTTTTGTTT HTGTTTTTGHH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 85 wtATTTTTAww Reverse Complement Original Motif Backward 1 11 0.0144021 Consensus sequence (original motif): DHATTTTTADD Consensus sequence (reverse complement motif): DDTAAAAATHD Alignment: DHATTTTTADD HTGTTTTTGHH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 102 AAAAAAAAAAA Reverse Complement Reverse Complement Backward 1 11 0.0192906 Consensus sequence (original motif): AAAAAAAAAAA Consensus sequence (reverse complement motif): TTTTTTTTTTT Alignment: TTTTTTTTTTT HTGTTTTTGHH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 75 yayAyAyACATrya Reverse Complement Reverse Complement Forward 4 11 0.0258087 Consensus sequence (original motif): HACAYAYACATRHD Consensus sequence (reverse complement motif): DHKATGTKTKTGTD Alignment: DHKATGTKTKTGTD ---HTGTTTTTGHH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 79 CACACACACACA Reverse Complement Reverse Complement Forward 2 11 0.0409728 Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG Alignment: TGTGTGTGTGTG -HTGTTTTTGHH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 92 tyTCTkTkTCyy Reverse Complement Original Motif Forward 2 11 0.0416867 Consensus sequence (original motif): BBTCTKTKTCHB Consensus sequence (reverse complement motif): VHGARAYAGAVV Alignment: BBTCTKTKTCHB -HTGTTTTTGHH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 95 CACACACACACA Reverse Complement Reverse Complement Forward 2 11 0.0421933 Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG Alignment: TGTGTGTGTGTG -HTGTTTTTGHH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 27 Motif 27 Reverse Complement Reverse Complement Forward 2 11 0.0439692 Consensus sequence (original motif): CAYACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTKTG Alignment: TGTGTGTGTGTKTG -HTGTTTTTGHH-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 RREB1 Original Motif Original Motif Backward 4 11 0.0504266 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: CCCCMAAMCAMCCMCMMMCV ------HHCAAAAACAH--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 26 Motif 26 Original Motif Reverse Complement Backward 4 11 0.0546799 Consensus sequence (original motif): TKKTTTGTTTTTTT Consensus sequence (reverse complement motif): AAAAAAACAAARRA Alignment: AAAAAAACAAARRA HHCAAAAACAH--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 87 Motif name: ssCGGsYCGss Consensus sequence (original motif): BSCGGSCCGSV Consensus sequence (reverse complement motif): VSCGGSCCGSB ************************************************************************ Best Matches for Motif ID 87 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 94 ssCGCksCGss Original Motif Reverse Complement Forward 1 11 0.00942713 Consensus sequence (original motif): VVCGCKSCGBB Consensus sequence (reverse complement motif): BBCGSRGCGVV Alignment: BBCGSRGCGVV BSCGGSCCGSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 78 sssCGssGCsss Reverse Complement Reverse Complement Backward 2 11 0.0201656 Consensus sequence (original motif): SSSCGSSGCSSS Consensus sequence (reverse complement motif): SSSGCSSCGSSS Alignment: SSSGCSSCGSSS VSCGGSCCGSB- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 ssCKCwsCGss Original Motif Original Motif Forward 1 11 0.0329154 Consensus sequence (original motif): BVCGCWSCGBV Consensus sequence (reverse complement motif): VBCGSWGCGVB Alignment: BVCGCWSCGBV BSCGGSCCGSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 ssGMsGRGCGss Original Motif Reverse Complement Forward 2 11 0.0352797 Consensus sequence (original motif): VVGCSGGGCGBB Consensus sequence (reverse complement motif): BBCGCCCSGCVV Alignment: BBCGCCCSGCVV -BSCGGSCCGSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 99 sgCTGGCCAGcs Reverse Complement Original Motif Forward 1 11 0.0445112 Consensus sequence (original motif): BBCTGGCCAGVV Consensus sequence (reverse complement motif): VVCTGGCCAGBB Alignment: BBCTGGCCAGVV VSCGGSCCGSB- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 90 ssCGsCwsCss Original Motif Original Motif Forward 1 11 0.045232 Consensus sequence (original motif): BBCGSCWSCBB Consensus sequence (reverse complement motif): BBGSWGSCGBB Alignment: BBCGSCWSCBB BSCGGSCCGSV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 80 ssCwGGCCwGCss Original Motif Reverse Complement Backward 2 11 0.0469326 Consensus sequence (original motif): BBCWGGCCAGCBB Consensus sequence (reverse complement motif): BBGCTGGCCWGBB Alignment: BBGCTGGCCWGBB -BSCGGSCCGSV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 88 ssCrCYyYCGss Original Motif Original Motif Backward 2 11 0.0505053 Consensus sequence (original motif): BBCRCCYCCGBB Consensus sequence (reverse complement motif): BBCGGKGGMGBB Alignment: BBCRCCYCCGBB BSCGGSCCGSV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 91 ssCGCCsCCrCCCss Original Motif Original Motif Backward 5 11 0.0554905 Consensus sequence (original motif): SSCGCCSCCGCCCSS Consensus sequence (reverse complement motif): SSGGGCGGSGGCGSS Alignment: SSCGCCSCCGCCCSS BSCGGSCCGSV---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 40 Ar Original Motif Reverse Complement Forward 11 11 0.0607093 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: VRVDGGHACAVDDKGTHCTDWH ----------BSCGGSCCGSV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 88 Motif name: ssCrCYyYCGss Consensus sequence (original motif): BBCRCCYCCGBB Consensus sequence (reverse complement motif): BBCGGKGGMGBB ************************************************************************ Best Matches for Motif ID 88 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 91 ssCGCCsCCrCCCss Reverse Complement Reverse Complement Forward 4 12 0.0119821 Consensus sequence (original motif): SSCGCCSCCGCCCSS Consensus sequence (reverse complement motif): SSGGGCGGSGGCGSS Alignment: SSGGGCGGSGGCGSS ---BBCGGKGGMGBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 ssGMsGRGCGss Original Motif Reverse Complement Forward 1 12 0.0239039 Consensus sequence (original motif): VVGCSGGGCGBB Consensus sequence (reverse complement motif): BBCGCCCSGCVV Alignment: BBCGCCCSGCVV BBCRCCYCCGBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 78 sssCGssGCsss Reverse Complement Original Motif Backward 1 12 0.0369717 Consensus sequence (original motif): SSSCGSSGCSSS Consensus sequence (reverse complement motif): SSSGCSSCGSSS Alignment: SSSCGSSGCSSS BBCGGKGGMGBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 28 Zfx Reverse Complement Reverse Complement Forward 3 12 0.0460326 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: VAGGCCBBGGCVBB --BBCGGKGGMGBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 61 Pax5 Original Motif Reverse Complement Forward 5 12 0.0474361 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD ----BBCRCCYCCGBB---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 99 sgCTGGCCAGcs Reverse Complement Reverse Complement Forward 1 12 0.0523473 Consensus sequence (original motif): BBCTGGCCAGVV Consensus sequence (reverse complement motif): VVCTGGCCAGBB Alignment: VVCTGGCCAGBB BBCGGKGGMGBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 RREB1 Original Motif Original Motif Backward 3 12 0.0532597 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: CCCCMAAMCAMCCMCMMMCV ------BBCRCCYCCGBB-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 80 ssCwGGCCwGCss Reverse Complement Reverse Complement Backward 1 12 0.0537463 Consensus sequence (original motif): BBCWGGCCAGCBB Consensus sequence (reverse complement motif): BBGCTGGCCWGBB Alignment: BBGCTGGCCWGBB -BBCGGKGGMGBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 103 ccCCAGTGCAbr Reverse Complement Original Motif Backward 1 12 0.0600002 Consensus sequence (original motif): HVCCAGTGCABD Consensus sequence (reverse complement motif): DBTGCACTGGVD Alignment: HVCCAGTGCABD BBCGGKGGMGBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 29 Zfp423 Reverse Complement Reverse Complement Backward 1 12 0.0618402 Consensus sequence (original motif): GSMMCCYARGGKKKC Consensus sequence (reverse complement motif): GYRYCCMTKGGYRSC Alignment: GYRYCCMTKGGYRSC ---BBCGGKGGMGBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 89 Motif name: ccCCmCACCcc Consensus sequence (original motif): HBCCMCACCHH Consensus sequence (reverse complement motif): DDGGTGRGGBD ************************************************************************ Best Matches for Motif ID 89 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 91 ssCGCCsCCrCCCss Original Motif Original Motif Backward 2 11 0.0286981 Consensus sequence (original motif): SSCGCCSCCGCCCSS Consensus sequence (reverse complement motif): SSGGGCGGSGGCGSS Alignment: SSCGCCSCCGCCCSS ---HBCCMCACCHH- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 90 ssCGsCwsCss Reverse Complement Reverse Complement Forward 1 11 0.0343768 Consensus sequence (original motif): BBCGSCWSCBB Consensus sequence (reverse complement motif): BBGSWGSCGBB Alignment: BBGSWGSCGBB DDGGTGRGGBD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 RREB1 Original Motif Original Motif Backward 4 11 0.0408135 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: CCCCMAAMCAMCCMCMMMCV ------HBCCMCACCHH--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 93 rrAGGGGGArr Original Motif Reverse Complement Forward 1 11 0.0470142 Consensus sequence (original motif): VVAGGGGGAVV Consensus sequence (reverse complement motif): VVTCCCCCTVV Alignment: VVTCCCCCTVV HBCCMCACCHH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 88 ssCrCYyYCGss Reverse Complement Reverse Complement Backward 1 11 0.0504854 Consensus sequence (original motif): BBCRCCYCCGBB Consensus sequence (reverse complement motif): BBCGGKGGMGBB Alignment: BBCGGKGGMGBB -DDGGTGRGGBD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 REST Original Motif Original Motif Backward 11 11 0.0523948 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC HBCCMCACCHH---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 ssGCTswGCCms Original Motif Reverse Complement Forward 1 11 0.0560955 Consensus sequence (original motif): VBGCTSAGCCHB Consensus sequence (reverse complement motif): BDGGCTSAGCBV Alignment: BDGGCTSAGCBV HBCCMCACCHH- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 44 Egr1 Reverse Complement Original Motif Backward 1 11 0.0561812 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: HGCGTGGGCGK DDGGTGRGGBD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 ssGMsGRGCGss Original Motif Reverse Complement Backward 2 11 0.0572567 Consensus sequence (original motif): VVGCSGGGCGBB Consensus sequence (reverse complement motif): BBCGCCCSGCVV Alignment: BBCGCCCSGCVV HBCCMCACCHH- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 51 INSM1 Reverse Complement Original Motif Backward 1 11 0.0585334 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: TGYCAGGGGGCR -DDGGTGRGGBD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 90 Motif name: ssCGsCwsCss Consensus sequence (original motif): BBCGSCWSCBB Consensus sequence (reverse complement motif): BBGSWGSCGBB ************************************************************************ Best Matches for Motif ID 90 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 88 ssCrCYyYCGss Original Motif Original Motif Backward 2 11 0.0236246 Consensus sequence (original motif): BBCRCCYCCGBB Consensus sequence (reverse complement motif): BBCGGKGGMGBB Alignment: BBCRCCYCCGBB BBCGSCWSCBB- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 89 ccCCmCACCcc Original Motif Original Motif Backward 1 11 0.0238413 Consensus sequence (original motif): HBCCMCACCHH Consensus sequence (reverse complement motif): DDGGTGRGGBD Alignment: HBCCMCACCHH BBCGSCWSCBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 78 sssCGssGCsss Original Motif Original Motif Forward 2 11 0.0239515 Consensus sequence (original motif): SSSCGSSGCSSS Consensus sequence (reverse complement motif): SSSGCSSCGSSS Alignment: SSSCGSSGCSSS -BBCGSCWSCBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 91 ssCGCCsCCrCCCss Reverse Complement Reverse Complement Backward 1 11 0.0274779 Consensus sequence (original motif): SSCGCCSCCGCCCSS Consensus sequence (reverse complement motif): SSGGGCGGSGGCGSS Alignment: SSGGGCGGSGGCGSS ----BBGSWGSCGBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 82 rmACAGCAGsr Original Motif Reverse Complement Forward 1 11 0.0336118 Consensus sequence (original motif): VVACAGCAGVD Consensus sequence (reverse complement motif): DVCTGCTGTVB Alignment: DVCTGCTGTVB BBCGSCWSCBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 94 ssCGCksCGss Reverse Complement Original Motif Backward 1 11 0.0337912 Consensus sequence (original motif): VVCGCKSCGBB Consensus sequence (reverse complement motif): BBCGSRGCGVV Alignment: VVCGCKSCGBB BBGSWGSCGBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 87 ssCGGsYCGss Original Motif Original Motif Forward 1 11 0.0346171 Consensus sequence (original motif): BSCGGSCCGSV Consensus sequence (reverse complement motif): VSCGGSCCGSB Alignment: BSCGGSCCGSV BBCGSCWSCBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 80 ssCwGGCCwGCss Reverse Complement Reverse Complement Backward 3 11 0.0353683 Consensus sequence (original motif): BBCWGGCCAGCBB Consensus sequence (reverse complement motif): BBGCTGGCCWGBB Alignment: BBGCTGGCCWGBB BBGSWGSCGBB-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 ssGMsGRGCGss Original Motif Reverse Complement Forward 2 11 0.0362688 Consensus sequence (original motif): VVGCSGGGCGBB Consensus sequence (reverse complement motif): BBCGCCCSGCVV Alignment: BBCGCCCSGCVV -BBCGSCWSCBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 ssCKCwsCGss Original Motif Reverse Complement Forward 1 11 0.0409983 Consensus sequence (original motif): BVCGCWSCGBV Consensus sequence (reverse complement motif): VBCGSWGCGVB Alignment: VBCGSWGCGVB BBCGSCWSCBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 91 Motif name: ssCGCCsCCrCCCss Consensus sequence (original motif): SSCGCCSCCGCCCSS Consensus sequence (reverse complement motif): SSGGGCGGSGGCGSS ************************************************************************ Best Matches for Motif ID 91 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 40 Ar Original Motif Original Motif Backward 3 15 0.059922 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: HWDAGHACRHHVTGTHCCHVMV -----SSCGCCSCCGCCCSS-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 RREB1 Original Motif Original Motif Backward 6 15 0.0619876 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: CCCCMAAMCAMCCMCMMMCV SSCGCCSCCGCCCSS----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 61 Pax5 Original Motif Reverse Complement Forward 2 15 0.0630737 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD -SSCGCCSCCGCCCSS---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 46 ESR2 Original Motif Reverse Complement Forward 1 15 0.0682659 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: BAGGYCABHBTGACCKHV SSCGCCSCCGCCCSS--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 45 ESR1 Reverse Complement Original Motif Backward 4 15 0.0700979 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY --SSGGGCGGSGGCGSS--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 28 Zfx Original Motif Original Motif Forward 1 14 0.537296 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV- SSCGCCSCCGCCCSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 37 PLAG1 Reverse Complement Original Motif Backward 1 14 0.564943 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: -GGGGCCCAAGGGGG SSGGGCGGSGGCGSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 36 PPARGRXRA Original Motif Reverse Complement Forward 2 14 0.568444 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: TGRCCTKTGHCCKAB- -SSCGCCSCCGCCCSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 64 Tcfcp2l1 Original Motif Original Motif Backward 1 14 0.569229 Consensus sequence (original motif): CCAGYYHVADCCRG Consensus sequence (reverse complement motif): CKGGDTBDMMCTGG Alignment: -CCAGYYHVADCCRG SSCGCCSCCGCCCSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 80 ssCwGGCCwGCss Reverse Complement Reverse Complement Backward 1 13 1.06715 Consensus sequence (original motif): BBCWGGCCAGCBB Consensus sequence (reverse complement motif): BBGCTGGCCWGBB Alignment: --BBGCTGGCCWGBB SSGGGCGGSGGCGSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 92 Motif name: tyTCTkTkTCyy Consensus sequence (original motif): BBTCTKTKTCHB Consensus sequence (reverse complement motif): VHGARAYAGAVV ************************************************************************ Best Matches for Motif ID 92 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 75 yayAyAyACATrya Reverse Complement Original Motif Forward 3 12 0.0337934 Consensus sequence (original motif): HACAYAYACATRHD Consensus sequence (reverse complement motif): DHKATGTKTKTGTD Alignment: HACAYAYACATRHD --VHGARAYAGAVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 95 CACACACACACA Original Motif Reverse Complement Backward 1 12 0.0374053 Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG Alignment: TGTGTGTGTGTG BBTCTKTKTCHB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 ssGCTswGCCms Original Motif Original Motif Backward 1 12 0.0380798 Consensus sequence (original motif): VBGCTSAGCCHB Consensus sequence (reverse complement motif): BDGGCTSAGCBV Alignment: VBGCTSAGCCHB BBTCTKTKTCHB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 26 Motif 26 Reverse Complement Reverse Complement Forward 2 12 0.0383981 Consensus sequence (original motif): TKKTTTGTTTTTTT Consensus sequence (reverse complement motif): AAAAAAACAAARRA Alignment: AAAAAAACAAARRA -VHGARAYAGAVV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 36 PPARGRXRA Reverse Complement Original Motif Backward 3 12 0.0399569 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA -VHGARAYAGAVV-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 79 CACACACACACA Reverse Complement Original Motif Backward 1 12 0.0403405 Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG Alignment: CACACACACACA VHGARAYAGAVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 50 HNF4A Reverse Complement Original Motif Backward 1 12 0.0411089 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: RGGBCAAAGKYCA -VHGARAYAGAVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 100 wrTGTATACAyw Reverse Complement Original Motif Backward 1 12 0.0525228 Consensus sequence (original motif): HDTGTATACAHD Consensus sequence (reverse complement motif): DHTGTATACADH Alignment: HDTGTATACAHD VHGARAYAGAVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 27 Motif 27 Reverse Complement Original Motif Backward 3 12 0.0539512 Consensus sequence (original motif): CAYACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTKTG Alignment: CAYACACACACACA VHGARAYAGAVV-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 40 Ar Original Motif Original Motif Backward 3 12 0.057338 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: HWDAGHACRHHVTGTHCCHVMV --------BBTCTKTKTCHB-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 93 Motif name: rrAGGGGGArr Consensus sequence (original motif): VVAGGGGGAVV Consensus sequence (reverse complement motif): VVTCCCCCTVV ************************************************************************ Best Matches for Motif ID 93 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 88 ssCrCYyYCGss Reverse Complement Original Motif Backward 2 11 0.0426359 Consensus sequence (original motif): BBCRCCYCCGBB Consensus sequence (reverse complement motif): BBCGGKGGMGBB Alignment: BBCRCCYCCGBB VVTCCCCCTVV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 89 ccCCmCACCcc Original Motif Reverse Complement Forward 1 11 0.0451601 Consensus sequence (original motif): HBCCMCACCHH Consensus sequence (reverse complement motif): DDGGTGRGGBD Alignment: DDGGTGRGGBD VVAGGGGGAVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 51 INSM1 Reverse Complement Reverse Complement Backward 2 11 0.0507544 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: MGCCCCCTGMCA VVTCCCCCTVV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 RREB1 Reverse Complement Original Motif Forward 3 11 0.0518016 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: CCCCMAAMCAMCCMCMMMCV --VVTCCCCCTVV------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 91 ssCGCCsCCrCCCss Reverse Complement Original Motif Forward 4 11 0.057219 Consensus sequence (original motif): SSCGCCSCCGCCCSS Consensus sequence (reverse complement motif): SSGGGCGGSGGCGSS Alignment: SSCGCCSCCGCCCSS ---VVTCCCCCTVV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 44 Egr1 Reverse Complement Reverse Complement Forward 1 11 0.05952 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: YCGCCCACGCH VVTCCCCCTVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 ssGMsGRGCGss Original Motif Original Motif Backward 1 11 0.0648994 Consensus sequence (original motif): VVGCSGGGCGBB Consensus sequence (reverse complement motif): BBCGCCCSGCVV Alignment: VVGCSGGGCGBB -VVAGGGGGAVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 92 tyTCTkTkTCyy Reverse Complement Original Motif Forward 2 11 0.0693142 Consensus sequence (original motif): BBTCTKTKTCHB Consensus sequence (reverse complement motif): VHGARAYAGAVV Alignment: BBTCTKTKTCHB -VVTCCCCCTVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 61 Pax5 Original Motif Original Motif Forward 9 11 0.0697139 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR --------VVAGGGGGAVV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 45 ESR1 Original Motif Original Motif Forward 3 11 0.0713568 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY --VVAGGGGGAVV------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 94 Motif name: ssCGCksCGss Consensus sequence (original motif): VVCGCKSCGBB Consensus sequence (reverse complement motif): BBCGSRGCGVV ************************************************************************ Best Matches for Motif ID 94 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 ssCKCwsCGss Original Motif Original Motif Forward 1 11 0 Consensus sequence (original motif): BVCGCWSCGBV Consensus sequence (reverse complement motif): VBCGSWGCGVB Alignment: BVCGCWSCGBV VVCGCKSCGBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 78 sssCGssGCsss Original Motif Reverse Complement Forward 2 11 0.0076298 Consensus sequence (original motif): SSSCGSSGCSSS Consensus sequence (reverse complement motif): SSSGCSSCGSSS Alignment: SSSGCSSCGSSS -VVCGCKSCGBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 87 ssCGGsYCGss Original Motif Reverse Complement Forward 1 11 0.0169077 Consensus sequence (original motif): BSCGGSCCGSV Consensus sequence (reverse complement motif): VSCGGSCCGSB Alignment: VSCGGSCCGSB VVCGCKSCGBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 ssGMsGRGCGss Original Motif Reverse Complement Backward 1 11 0.0276374 Consensus sequence (original motif): VVGCSGGGCGBB Consensus sequence (reverse complement motif): BBCGCCCSGCVV Alignment: BBCGCCCSGCVV -VVCGCKSCGBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 ssGCTswGCCms Original Motif Reverse Complement Backward 1 11 0.0456402 Consensus sequence (original motif): VBGCTSAGCCHB Consensus sequence (reverse complement motif): BDGGCTSAGCBV Alignment: BDGGCTSAGCBV -VVCGCKSCGBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 88 ssCrCYyYCGss Original Motif Original Motif Forward 1 11 0.0497808 Consensus sequence (original motif): BBCRCCYCCGBB Consensus sequence (reverse complement motif): BBCGGKGGMGBB Alignment: BBCRCCYCCGBB VVCGCKSCGBB- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 91 ssCGCCsCCrCCCss Reverse Complement Reverse Complement Forward 5 11 0.0512927 Consensus sequence (original motif): SSCGCCSCCGCCCSS Consensus sequence (reverse complement motif): SSGGGCGGSGGCGSS Alignment: SSGGGCGGSGGCGSS ----BBCGSRGCGVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 90 ssCGsCwsCss Reverse Complement Original Motif Backward 1 11 0.0518867 Consensus sequence (original motif): BBCGSCWSCBB Consensus sequence (reverse complement motif): BBGSWGSCGBB Alignment: BBCGSCWSCBB BBCGSRGCGVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 61 Pax5 Original Motif Reverse Complement Backward 5 11 0.0612549 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD -----VVCGCKSCGBB---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 28 Zfx Reverse Complement Original Motif Forward 4 11 0.0677552 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV ---BBCGSRGCGVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 95 Motif name: CACACACACACA Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG ************************************************************************ Best Matches for Motif ID 95 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 79 CACACACACACA Original Motif Original Motif Backward 1 12 0 Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG Alignment: CACACACACACA CACACACACACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 27 Motif 27 Reverse Complement Reverse Complement Forward 1 12 0.0205118 Consensus sequence (original motif): CAYACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTKTG Alignment: TGTGTGTGTGTKTG TGTGTGTGTGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 25 Motif 25 Original Motif Original Motif Forward 3 12 0.0385589 Consensus sequence (original motif): CACACAVRCACACA Consensus sequence (reverse complement motif): TGTGTGKVTGTGTG Alignment: CACACAVRCACACA --CACACACACACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 75 yayAyAyACATrya Original Motif Original Motif Forward 1 12 0.0642933 Consensus sequence (original motif): HACAYAYACATRHD Consensus sequence (reverse complement motif): DHKATGTKTKTGTD Alignment: HACAYAYACATRHD CACACACACACA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 97 ryayAyAyrtGTRTrTry Reverse Complement Original Motif Forward 6 12 0.0802145 Consensus sequence (original motif): DHAYAYAYRTGTGTRTDH Consensus sequence (reverse complement motif): HDAMACACAKKTKTKTHD Alignment: DHAYAYAYRTGTGTRTDH -----TGTGTGTGTGTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 92 tyTCTkTkTCyy Original Motif Reverse Complement Backward 1 12 0.0817886 Consensus sequence (original motif): BBTCTKTKTCHB Consensus sequence (reverse complement motif): VHGARAYAGAVV Alignment: VHGARAYAGAVV CACACACACACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 101 AAAAAAAAAAA Original Motif Original Motif Forward 1 12 0.0838132 Consensus sequence (original motif): HVCATGCATGCABD Consensus sequence (reverse complement motif): DVTGCATGCATGBH Alignment: HVCATGCATGCABD CACACACACACA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 RREB1 Original Motif Original Motif Backward 3 12 0.0893611 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: CCCCMAAMCAMCCMCMMMCV ------CACACACACACA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 26 Motif 26 Original Motif Reverse Complement Forward 2 12 0.098214 Consensus sequence (original motif): TKKTTTGTTTTTTT Consensus sequence (reverse complement motif): AAAAAAACAAARRA Alignment: AAAAAAACAAARRA -CACACACACACA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 96 yrTGTGCACAyr Original Motif Original Motif Backward 1 12 0.100025 Consensus sequence (original motif): BVTGTGCACABV Consensus sequence (reverse complement motif): BBTGTGCACAVV Alignment: BVTGTGCACABV CACACACACACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 96 Motif name: yrTGTGCACAyr Consensus sequence (original motif): BVTGTGCACABV Consensus sequence (reverse complement motif): BBTGTGCACAVV ************************************************************************ Best Matches for Motif ID 96 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 100 wrTGTATACAyw Original Motif Original Motif Backward 1 12 0.0122182 Consensus sequence (original motif): HDTGTATACAHD Consensus sequence (reverse complement motif): DHTGTATACADH Alignment: HDTGTATACAHD BVTGTGCACABV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 40 Ar Reverse Complement Original Motif Forward 1 12 0.0509564 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: HWDAGHACRHHVTGTHCCHVMV BBTGTGCACAVV---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 75 yayAyAyACATrya Original Motif Original Motif Backward 3 12 0.0535005 Consensus sequence (original motif): HACAYAYACATRHD Consensus sequence (reverse complement motif): DHKATGTKTKTGTD Alignment: HACAYAYACATRHD BVTGTGCACABV-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 101 AAAAAAAAAAA Original Motif Original Motif Forward 1 12 0.0598757 Consensus sequence (original motif): HVCATGCATGCABD Consensus sequence (reverse complement motif): DVTGCATGCATGBH Alignment: HVCATGCATGCABD BVTGTGCACABV-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 36 PPARGRXRA Reverse Complement Reverse Complement Forward 4 12 0.0627131 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: TGRCCTKTGHCCKAB ---BBTGTGCACAVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 103 ccCCAGTGCAbr Original Motif Original Motif Forward 1 12 0.065528 Consensus sequence (original motif): HVCCAGTGCABD Consensus sequence (reverse complement motif): DBTGCACTGGVD Alignment: HVCCAGTGCABD BVTGTGCACABV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 95 CACACACACACA Original Motif Original Motif Backward 1 12 0.0658006 Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG Alignment: CACACACACACA BVTGTGCACABV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 79 CACACACACACA Original Motif Original Motif Backward 1 12 0.0678445 Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG Alignment: CACACACACACA BVTGTGCACABV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 45 ESR1 Original Motif Reverse Complement Backward 8 12 0.0683806 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV -BVTGTGCACABV------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 80 ssCwGGCCwGCss Original Motif Original Motif Forward 2 12 0.0730906 Consensus sequence (original motif): BBCWGGCCAGCBB Consensus sequence (reverse complement motif): BBGCTGGCCWGBB Alignment: BBCWGGCCAGCBB -BVTGTGCACABV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 97 Motif name: ryayAyAyrtGTRTrTry Consensus sequence (original motif): DHAYAYAYRTGTGTRTDH Consensus sequence (reverse complement motif): HDAMACACAKKTKTKTHD ************************************************************************ Best Matches for Motif ID 97 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 40 Ar Reverse Complement Reverse Complement Backward 2 18 0.0567857 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: VRVDGGHACAVDDKGTHCTDWH ---HDAMACACAKKTKTKTHD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 61 Pax5 Original Motif Original Motif Backward 2 18 0.0640097 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR -DHAYAYAYRTGTGTRTDH- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 29 Zfp423 Reverse Complement Original Motif Forward 1 15 1.57612 Consensus sequence (original motif): GSMMCCYARGGKKKC Consensus sequence (reverse complement motif): GYRYCCMTKGGYRSC Alignment: GSMMCCYARGGKKKC--- HDAMACACAKKTKTKTHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 38 NR2F1 Reverse Complement Reverse Complement Forward 1 14 2.07113 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: AKGYYCAAAGRTCA---- HDAMACACAKKTKTKTHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 36 PPARGRXRA Reverse Complement Reverse Complement Backward 2 14 2.07717 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: ----TGRCCTKTGHCCKAB HDAMACACAKKTKTKTHD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 75 yayAyAyACATrya Original Motif Original Motif Forward 2 13 2.52342 Consensus sequence (original motif): HACAYAYACATRHD Consensus sequence (reverse complement motif): DHKATGTKTKTGTD Alignment: HACAYAYACATRHD----- -DHAYAYAYRTGTGTRTDH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 101 AAAAAAAAAAA Original Motif Original Motif Backward 2 13 2.5527 Consensus sequence (original motif): HVCATGCATGCABD Consensus sequence (reverse complement motif): DVTGCATGCATGBH Alignment: -----HVCATGCATGCABD DHAYAYAYRTGTGTRTDH- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 27 Motif 27 Reverse Complement Original Motif Backward 2 13 2.55729 Consensus sequence (original motif): CAYACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTKTG Alignment: -----CAYACACACACACA HDAMACACAKKTKTKTHD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 25 Motif 25 Reverse Complement Original Motif Backward 2 13 2.56171 Consensus sequence (original motif): CACACAVRCACACA Consensus sequence (reverse complement motif): TGTGTGKVTGTGTG Alignment: -----CACACAVRCACACA HDAMACACAKKTKTKTHD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 34 RREB1 Reverse Complement Original Motif Backward 8 13 2.57744 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: -----CCCCMAAMCAMCCMCMMMCV HDAMACACAKKTKTKTHD------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 98 Motif name: wwTAATTAATTAww Consensus sequence (original motif): HDTAATTAATTAHD Consensus sequence (reverse complement motif): DHTAATTAATTADH ************************************************************************ Best Matches for Motif ID 98 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 75 yayAyAyACATrya Original Motif Original Motif Forward 1 14 0.0386482 Consensus sequence (original motif): HACAYAYACATRHD Consensus sequence (reverse complement motif): DHKATGTKTKTGTD Alignment: HACAYAYACATRHD HDTAATTAATTAHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 101 AAAAAAAAAAA Reverse Complement Reverse Complement Forward 1 14 0.0492995 Consensus sequence (original motif): HVCATGCATGCABD Consensus sequence (reverse complement motif): DVTGCATGCATGBH Alignment: DVTGCATGCATGBH DHTAATTAATTADH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 26 Motif 26 Reverse Complement Reverse Complement Forward 2 13 0.540688 Consensus sequence (original motif): TKKTTTGTTTTTTT Consensus sequence (reverse complement motif): AAAAAAACAAARRA Alignment: AAAAAAACAAARRA- -DHTAATTAATTADH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 100 wrTGTATACAyw Original Motif Original Motif Forward 1 12 1.04123 Consensus sequence (original motif): HDTGTATACAHD Consensus sequence (reverse complement motif): DHTGTATACADH Alignment: HDTGTATACAHD-- HDTAATTAATTAHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 104 wtTTWwAAAaw Original Motif Reverse Complement Forward 1 11 1.53128 Consensus sequence (original motif): HHTTTWAAADD Consensus sequence (reverse complement motif): DDTTTWAAAHH Alignment: DDTTTWAAAHH--- HDTAATTAATTAHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 85 wtATTTTTAww Reverse Complement Original Motif Forward 1 11 1.53238 Consensus sequence (original motif): DHATTTTTADD Consensus sequence (reverse complement motif): DDTAAAAATHD Alignment: DHATTTTTADD--- DHTAATTAATTADH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 102 AAAAAAAAAAA Original Motif Original Motif Backward 1 11 1.54293 Consensus sequence (original motif): AAAAAAAAAAA Consensus sequence (reverse complement motif): TTTTTTTTTTT Alignment: ---AAAAAAAAAAA HDTAATTAATTAHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 83 wwTAAAwAww Original Motif Original Motif Backward 1 10 2 Consensus sequence (original motif): DDTAAAWAHH Consensus sequence (reverse complement motif): HHTWTTTADD Alignment: ----DDTAAAWAHH HDTAATTAATTAHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 81 wwTAAwAAww Original Motif Original Motif Backward 1 10 2.00262 Consensus sequence (original motif): DDTAAWAAHH Consensus sequence (reverse complement motif): HHTTWTTADD Alignment: ----DDTAAWAAHH HDTAATTAATTAHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 74 twTACATAvw Original Motif Reverse Complement Forward 1 10 2.02175 Consensus sequence (original motif): HHTACATAVD Consensus sequence (reverse complement motif): DBTATGTAHH Alignment: DBTATGTAHH---- HDTAATTAATTAHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 99 Motif name: sgCTGGCCAGcs Consensus sequence (original motif): BBCTGGCCAGVV Consensus sequence (reverse complement motif): VVCTGGCCAGBB ************************************************************************ Best Matches for Motif ID 99 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 80 ssCwGGCCwGCss Original Motif Original Motif Forward 1 12 0 Consensus sequence (original motif): BBCWGGCCAGCBB Consensus sequence (reverse complement motif): BBGCTGGCCWGBB Alignment: BBCWGGCCAGCBB BBCTGGCCAGVV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 45 ESR1 Reverse Complement Reverse Complement Forward 7 12 0.0561158 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV ------VVCTGGCCAGBB-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 REST Original Motif Original Motif Backward 3 12 0.0580329 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC -------BBCTGGCCAGVV-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 88 ssCrCYyYCGss Reverse Complement Reverse Complement Forward 1 12 0.0691833 Consensus sequence (original motif): BBCRCCYCCGBB Consensus sequence (reverse complement motif): BBCGGKGGMGBB Alignment: BBCGGKGGMGBB VVCTGGCCAGBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 40 Ar Original Motif Original Motif Backward 2 12 0.0809423 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: HWDAGHACRHHVTGTHCCHVMV ---------BBCTGGCCAGVV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 78 sssCGssGCsss Original Motif Original Motif Backward 1 12 0.0853247 Consensus sequence (original motif): SSSCGSSGCSSS Consensus sequence (reverse complement motif): SSSGCSSCGSSS Alignment: SSSCGSSGCSSS BBCTGGCCAGVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 61 Pax5 Reverse Complement Reverse Complement Backward 3 12 0.0865201 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD ------VVCTGGCCAGBB-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 ssGMsGRGCGss Reverse Complement Original Motif Backward 1 12 0.0875502 Consensus sequence (original motif): VVGCSGGGCGBB Consensus sequence (reverse complement motif): BBCGCCCSGCVV Alignment: VVGCSGGGCGBB VVCTGGCCAGBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 101 AAAAAAAAAAA Original Motif Reverse Complement Backward 1 12 0.0885607 Consensus sequence (original motif): HVCATGCATGCABD Consensus sequence (reverse complement motif): DVTGCATGCATGBH Alignment: DVTGCATGCATGBH --BBCTGGCCAGVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 87 ssCGGsYCGss Reverse Complement Original Motif Forward 1 11 0.555159 Consensus sequence (original motif): BSCGGSCCGSV Consensus sequence (reverse complement motif): VSCGGSCCGSB Alignment: BSCGGSCCGSV- VVCTGGCCAGBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 100 Motif name: wrTGTATACAyw Consensus sequence (original motif): HDTGTATACAHD Consensus sequence (reverse complement motif): DHTGTATACADH ************************************************************************ Best Matches for Motif ID 100 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 96 yrTGTGCACAyr Original Motif Original Motif Forward 1 12 0.0107886 Consensus sequence (original motif): BVTGTGCACABV Consensus sequence (reverse complement motif): BBTGTGCACAVV Alignment: BVTGTGCACABV HDTGTATACAHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 101 AAAAAAAAAAA Original Motif Original Motif Backward 1 12 0.026179 Consensus sequence (original motif): HVCATGCATGCABD Consensus sequence (reverse complement motif): DVTGCATGCATGBH Alignment: HVCATGCATGCABD --HDTGTATACAHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 75 yayAyAyACATrya Original Motif Original Motif Forward 1 12 0.0432442 Consensus sequence (original motif): HACAYAYACATRHD Consensus sequence (reverse complement motif): DHKATGTKTKTGTD Alignment: HACAYAYACATRHD HDTGTATACAHD-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 40 Ar Reverse Complement Reverse Complement Backward 9 12 0.0557046 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: VRVDGGHACAVDDKGTHCTDWH --DHTGTATACADH-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 92 tyTCTkTkTCyy Reverse Complement Original Motif Forward 1 12 0.0612523 Consensus sequence (original motif): BBTCTKTKTCHB Consensus sequence (reverse complement motif): VHGARAYAGAVV Alignment: BBTCTKTKTCHB DHTGTATACADH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 103 ccCCAGTGCAbr Original Motif Original Motif Forward 1 12 0.0639471 Consensus sequence (original motif): HVCCAGTGCABD Consensus sequence (reverse complement motif): DBTGCACTGGVD Alignment: HVCCAGTGCABD HDTGTATACAHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 95 CACACACACACA Original Motif Original Motif Forward 1 12 0.0666592 Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG Alignment: CACACACACACA HDTGTATACAHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 98 wwTAATTAATTAww Original Motif Original Motif Backward 3 12 0.0670186 Consensus sequence (original motif): HDTAATTAATTAHD Consensus sequence (reverse complement motif): DHTAATTAATTADH Alignment: HDTAATTAATTAHD HDTGTATACAHD-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 97 ryayAyAyrtGTRTrTry Original Motif Original Motif Backward 2 12 0.0681793 Consensus sequence (original motif): DHAYAYAYRTGTGTRTDH Consensus sequence (reverse complement motif): HDAMACACAKKTKTKTHD Alignment: DHAYAYAYRTGTGTRTDH -----HDTGTATACAHD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 REST Original Motif Reverse Complement Forward 9 12 0.0704332 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA --------HDTGTATACAHD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 101 Motif name: AAAAAAAAAAA Consensus sequence (original motif): HVCATGCATGCABD Consensus sequence (reverse complement motif): DVTGCATGCATGBH ************************************************************************ Best Matches for Motif ID 101 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 75 yayAyAyACATrya Original Motif Original Motif Backward 1 14 0.0415454 Consensus sequence (original motif): HACAYAYACATRHD Consensus sequence (reverse complement motif): DHKATGTKTKTGTD Alignment: HACAYAYACATRHD HVCATGCATGCABD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 97 ryayAyAyrtGTRTrTry Original Motif Original Motif Forward 2 14 0.0460165 Consensus sequence (original motif): DHAYAYAYRTGTGTRTDH Consensus sequence (reverse complement motif): HDAMACACAKKTKTKTHD Alignment: DHAYAYAYRTGTGTRTDH -HVCATGCATGCABD--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 61 Pax5 Reverse Complement Reverse Complement Forward 5 14 0.0566797 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD ----DVTGCATGCATGBH-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 27 Motif 27 Original Motif Original Motif Forward 1 14 0.0676844 Consensus sequence (original motif): CAYACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTKTG Alignment: CAYACACACACACA HVCATGCATGCABD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 45 ESR1 Reverse Complement Original Motif Backward 5 14 0.0683653 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY --DVTGCATGCATGBH---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 25 Motif 25 Original Motif Original Motif Backward 1 14 0.0701592 Consensus sequence (original motif): CACACAVRCACACA Consensus sequence (reverse complement motif): TGTGTGKVTGTGTG Alignment: CACACAVRCACACA HVCATGCATGCABD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 46 ESR2 Reverse Complement Reverse Complement Forward 5 14 0.0703872 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: BAGGYCABHBTGACCKHV ----DVTGCATGCATGBH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 98 wwTAATTAATTAww Reverse Complement Reverse Complement Forward 1 14 0.0704123 Consensus sequence (original motif): HDTAATTAATTAHD Consensus sequence (reverse complement motif): DHTAATTAATTADH Alignment: DHTAATTAATTADH DVTGCATGCATGBH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 80 ssCwGGCCwGCss Reverse Complement Reverse Complement Backward 1 13 0.540961 Consensus sequence (original motif): BBCWGGCCAGCBB Consensus sequence (reverse complement motif): BBGCTGGCCWGBB Alignment: -BBGCTGGCCWGBB DVTGCATGCATGBH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 100 wrTGTATACAyw Original Motif Original Motif Backward 1 12 1.0215 Consensus sequence (original motif): HDTGTATACAHD Consensus sequence (reverse complement motif): DHTGTATACADH Alignment: --HDTGTATACAHD HVCATGCATGCABD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 102 Motif name: AAAAAAAAAAA Consensus sequence (original motif): AAAAAAAAAAA Consensus sequence (reverse complement motif): TTTTTTTTTTT ************************************************************************ Best Matches for Motif ID 102 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 26 Motif 26 Original Motif Reverse Complement Forward 3 11 0.0385663 Consensus sequence (original motif): TKKTTTGTTTTTTT Consensus sequence (reverse complement motif): AAAAAAACAAARRA Alignment: AAAAAAACAAARRA --AAAAAAAAAAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 69 aaACAAAACaa Original Motif Original Motif Backward 1 11 0.0415349 Consensus sequence (original motif): AAACAAAACAA Consensus sequence (reverse complement motif): TTGTTTTGTTT Alignment: AAACAAAACAA AAAAAAAAAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 86 aaCAAAAACaa Reverse Complement Reverse Complement Backward 1 11 0.0486936 Consensus sequence (original motif): HHCAAAAACAH Consensus sequence (reverse complement motif): HTGTTTTTGHH Alignment: HTGTTTTTGHH TTTTTTTTTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 85 wtATTTTTAww Original Motif Reverse Complement Backward 1 11 0.0611986 Consensus sequence (original motif): DHATTTTTADD Consensus sequence (reverse complement motif): DDTAAAAATHD Alignment: DDTAAAAATHD AAAAAAAAAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 92 tyTCTkTkTCyy Original Motif Reverse Complement Backward 2 11 0.071295 Consensus sequence (original motif): BBTCTKTKTCHB Consensus sequence (reverse complement motif): VHGARAYAGAVV Alignment: VHGARAYAGAVV AAAAAAAAAAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 95 CACACACACACA Reverse Complement Reverse Complement Forward 1 11 0.0828525 Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG Alignment: TGTGTGTGTGTG TTTTTTTTTTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 79 CACACACACACA Reverse Complement Reverse Complement Backward 2 11 0.0835838 Consensus sequence (original motif): CACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTG Alignment: TGTGTGTGTGTG TTTTTTTTTTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 75 yayAyAyACATrya Reverse Complement Reverse Complement Forward 3 11 0.0851246 Consensus sequence (original motif): HACAYAYACATRHD Consensus sequence (reverse complement motif): DHKATGTKTKTGTD Alignment: DHKATGTKTKTGTD --TTTTTTTTTTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 104 wtTTWwAAAaw Original Motif Original Motif Forward 1 11 0.0884049 Consensus sequence (original motif): HHTTTWAAADD Consensus sequence (reverse complement motif): DDTTTWAAAHH Alignment: HHTTTWAAADD AAAAAAAAAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 97 ryayAyAyrtGTRTrTry Reverse Complement Reverse Complement Forward 8 11 0.097006 Consensus sequence (original motif): DHAYAYAYRTGTGTRTDH Consensus sequence (reverse complement motif): HDAMACACAKKTKTKTHD Alignment: HDAMACACAKKTKTKTHD -------TTTTTTTTTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 103 Motif name: ccCCAGTGCAbr Consensus sequence (original motif): HVCCAGTGCABD Consensus sequence (reverse complement motif): DBTGCACTGGVD ************************************************************************ Best Matches for Motif ID 103 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 45 ESR1 Original Motif Original Motif Forward 2 12 0.0330443 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY -HVCCAGTGCABD------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 40 Ar Reverse Complement Reverse Complement Forward 3 12 0.0429385 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: VRVDGGHACAVDDKGTHCTDWH --DBTGCACTGGVD-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 ssGCTswGCCms Reverse Complement Reverse Complement Forward 1 12 0.045363 Consensus sequence (original motif): VBGCTSAGCCHB Consensus sequence (reverse complement motif): BDGGCTSAGCBV Alignment: BDGGCTSAGCBV DBTGCACTGGVD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 ssGMsGRGCGss Reverse Complement Reverse Complement Forward 1 12 0.0492776 Consensus sequence (original motif): VVGCSGGGCGBB Consensus sequence (reverse complement motif): BBCGCCCSGCVV Alignment: BBCGCCCSGCVV DBTGCACTGGVD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 80 ssCwGGCCwGCss Original Motif Reverse Complement Backward 1 12 0.0514849 Consensus sequence (original motif): BBCWGGCCAGCBB Consensus sequence (reverse complement motif): BBGCTGGCCWGBB Alignment: BBGCTGGCCWGBB -HVCCAGTGCABD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 78 sssCGssGCsss Original Motif Original Motif Forward 1 12 0.0547614 Consensus sequence (original motif): SSSCGSSGCSSS Consensus sequence (reverse complement motif): SSSGCSSCGSSS Alignment: SSSCGSSGCSSS HVCCAGTGCABD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 36 PPARGRXRA Reverse Complement Original Motif Backward 3 12 0.0564387 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA -DBTGCACTGGVD-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 35 REST Reverse Complement Original Motif Forward 2 12 0.0567619 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC -DBTGCACTGGVD-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 88 ssCrCYyYCGss Reverse Complement Original Motif Backward 1 12 0.058391 Consensus sequence (original motif): BBCRCCYCCGBB Consensus sequence (reverse complement motif): BBCGGKGGMGBB Alignment: BBCRCCYCCGBB DBTGCACTGGVD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 61 Pax5 Reverse Complement Reverse Complement Backward 7 12 0.0587621 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD --DBTGCACTGGVD------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 104 Motif name: wtTTWwAAAaw Consensus sequence (original motif): HHTTTWAAADD Consensus sequence (reverse complement motif): DDTTTWAAAHH ************************************************************************ Best Matches for Motif ID 104 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 85 wtATTTTTAww Reverse Complement Original Motif Backward 1 11 0.0593833 Consensus sequence (original motif): DHATTTTTADD Consensus sequence (reverse complement motif): DDTAAAAATHD Alignment: DHATTTTTADD DDTTTWAAAHH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 100 wrTGTATACAyw Reverse Complement Original Motif Forward 2 11 0.0766819 Consensus sequence (original motif): HDTGTATACAHD Consensus sequence (reverse complement motif): DHTGTATACADH Alignment: HDTGTATACAHD -DDTTTWAAAHH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 98 wwTAATTAATTAww Reverse Complement Original Motif Forward 4 11 0.0874663 Consensus sequence (original motif): HDTAATTAATTAHD Consensus sequence (reverse complement motif): DHTAATTAATTADH Alignment: HDTAATTAATTAHD ---DDTTTWAAAHH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 102 AAAAAAAAAAA Original Motif Original Motif Backward 1 11 0.0882491 Consensus sequence (original motif): AAAAAAAAAAA Consensus sequence (reverse complement motif): TTTTTTTTTTT Alignment: AAAAAAAAAAA HHTTTWAAADD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 86 aaCAAAAACaa Original Motif Original Motif Backward 1 11 0.0940379 Consensus sequence (original motif): HHCAAAAACAH Consensus sequence (reverse complement motif): HTGTTTTTGHH Alignment: HHCAAAAACAH HHTTTWAAADD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 96 yrTGTGCACAyr Reverse Complement Reverse Complement Forward 1 11 0.0947707 Consensus sequence (original motif): BVTGTGCACABV Consensus sequence (reverse complement motif): BBTGTGCACAVV Alignment: BBTGTGCACAVV DDTTTWAAAHH- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 26 Motif 26 Original Motif Reverse Complement Backward 3 11 0.095526 Consensus sequence (original motif): TKKTTTGTTTTTTT Consensus sequence (reverse complement motif): AAAAAAACAAARRA Alignment: AAAAAAACAAARRA -HHTTTWAAADD-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 40 Ar Reverse Complement Reverse Complement Backward 1 11 0.100218 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: VRVDGGHACAVDDKGTHCTDWH -----------DDTTTWAAAHH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 69 aaACAAAACaa Original Motif Original Motif Backward 1 11 0.100239 Consensus sequence (original motif): AAACAAAACAA Consensus sequence (reverse complement motif): TTGTTTTGTTT Alignment: AAACAAAACAA HHTTTWAAADD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 38 NR2F1 Reverse Complement Original Motif Forward 1 11 0.100766 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: TGAMCTTTGMMCYT DDTTTWAAAHH--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Results created by MOTIFSIM on 06-18-2018 15:30:26 Runtime: 835.059 seconds MOTIFSIM is written by Ngoc Tam L. 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