MOTIFSIM - MOTIF SIMilarity Detection Tool

Version 2.0

INPUT

Input Parameters
Number of files: 5
Number of top significant motifs: 10
Number of best matches: 10
Similarity cutoff >= 0.75
Output file type: All
Output file format: All

Input files and motif counts
File name Count of motifs Dataset number
DREME_DM230.txt 1 1
MEME_DM230.txt 20 2
PScanChIP_DM230.txt 14 3
RSAT_peak-motifs_DM230.txt 10 4
W-ChIPMotifs_DM230.txt 11 5

RESULTS

Top 10 Significant Motifs - Global Matching (Highest to Lowest)

Dataset #: 4 Motif ID: 45 Motif name: wbgTAAATAww

Original motif     Consensus sequence: DBGTAAATAHD Reverse complement motif     Consensus sequence: DHTATTTACBD

Best Matches for Top Significant Motif ID 45 (Highest to Lowest)

Dataset #: 5
Motif ID: 56
Motif name: TFM11
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 15
Number of overlap: 11
Similarity score: 0.0192768

Alignment:
TWVHWWWYTTTYTTTTTHTTTVWBH
--------------DHTATTTACBD

Original motif     Consensus sequence: HDWVAAAHAAAAAMAAAMWWWHBWA Reverse complement motif     Consensus sequence: TWVHWWWYTTTYTTTTTHTTTVWBH

Dataset #: 2
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 11
Similarity score: 0.0250541

Alignment:
AATHATATWTHAAA
DHTATTTACBD---

Original motif     Consensus sequence: AATHATATWTHAAA Reverse complement motif     Consensus sequence: TTTDAWATATHATT

Dataset #: 2
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.027895

Alignment:
AATTYDGAARTAWW
---DBGTAAATAHD

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

Dataset #: 5
Motif ID: 52
Motif name: TFM1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0283217

Alignment:
ABAAAAAAWHAAAAARAW
DBGTAAATAHD-------

Original motif     Consensus sequence: WTKTTTTTHWTTTTTTBT Reverse complement motif     Consensus sequence: ABAAAAAAWHAAAAARAW

Dataset #: 5
Motif ID: 53
Motif name: TFM3
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.0308097

Alignment:
TWAAWTTVTGAAAAAHWW
------DBGTAAATAHD-

Original motif     Consensus sequence: WWHTTTTTCABAAWTTWA Reverse complement motif     Consensus sequence: TWAAWTTVTGAAAAAHWW

Dataset #: 5
Motif ID: 55
Motif name: TFM13
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 8
Number of overlap: 11
Similarity score: 0.0333874

Alignment:
ATKAAWTTTTRMAABAHHTW
-------DBGTAAATAHD--

Original motif     Consensus sequence: ATKAAWTTTTRMAABAHHTW Reverse complement motif     Consensus sequence: WAHHTVTTYKAAAAWTTRAT

Dataset #: 2
Motif ID: 4
Motif name: Motif 4
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0361187

Alignment:
AWGKAAWTTTT
DBGTAAATAHD

Original motif     Consensus sequence: AAAAWTTRCWT Reverse complement motif     Consensus sequence: AWGKAAWTTTT

Dataset #: 2
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.0410381

Alignment:
AWAAAWTWAAASWA
--DHTATTTACBD-

Original motif     Consensus sequence: AWAAAWTWAAASWA Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

Dataset #: 2
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0477814

Alignment:
AWTAAATAYAATTT
---DHTATTTACBD

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 10
Number of overlap: 11
Similarity score: 0.0512987

Alignment:
DGVBCABTGDWGCGKRRCSR
DBGTAAATAHD---------

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD

Dataset #: 3 Motif ID: 24 Motif name: SP1

Original motif     Consensus sequence: CCCCKCCCCC Reverse complement motif     Consensus sequence: GGGGGYGGGG

Best Matches for Top Significant Motif ID 24 (Highest to Lowest)

Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 10
Similarity score: 0.00451594

Alignment:
CSKCCCCGCCCCSY
---CCCCKCCCCC-

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG

Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 10
Similarity score: 0.00965796

Alignment:
HVGCCCCGCCCCBB
---CCCCKCCCCC-

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD

Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.0127292

Alignment:
BCCGCCCCGCCCCBB
----CCCCKCCCCC-

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB

Dataset #: 5
Motif ID: 50
Motif name: TFF11
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 10
Similarity score: 0.0174405

Alignment:
GGMGGRGGCGGVGC
---GGGGGYGGGG-

Original motif     Consensus sequence: GGMGGRGGCGGVGC Reverse complement motif     Consensus sequence: GCVCCGCCMCCYCC

Dataset #: 5
Motif ID: 54
Motif name: TFM12
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 10
Similarity score: 0.0301548

Alignment:
CYYCBBCYYYTCCHCCTYYY
------CCCCKCCCCC----

Original motif     Consensus sequence: CYYCBBCYYYTCCHCCTYYY Reverse complement motif     Consensus sequence: KKKAGGDGGAKKMGBBGKMG

Dataset #: 5
Motif ID: 51
Motif name: TFM2
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0329167

Alignment:
RGRGGAGRRGGHGGDG
------GGGGGYGGGG

Original motif     Consensus sequence: RGRGGAGRRGGHGGDG Reverse complement motif     Consensus sequence: CHCCBCCKMCTCCKCM

Dataset #: 5
Motif ID: 49
Motif name: TFF1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.0557738

Alignment:
GCVGCGGCBCCG
-CCCCKCCCCC-

Original motif     Consensus sequence: CGGVGCCGCVGC Reverse complement motif     Consensus sequence: GCVGCGGCBCCG

Dataset #: 2
Motif ID: 2
Motif name: Motif 2
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0648214

Alignment:
MTMMTCMMTCTKCK
----CCCCKCCCCC

Original motif     Consensus sequence: RGRAGARRGARRAR Reverse complement motif     Consensus sequence: MTMMTCMMTCTKCK

Dataset #: 5
Motif ID: 48
Motif name: TFW3
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0762976

Alignment:
CGGCYBCGCG
CCCCKCCCCC

Original motif     Consensus sequence: CGGCYBCGCG Reverse complement motif     Consensus sequence: CGCGBMGCCG

Dataset #: 4
Motif ID: 40
Motif name: kcACCTGCAgc
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0841987

Alignment:
GBTGCAGGTGB
GGGGGYGGGG-

Original motif     Consensus sequence: BCACCTGCABC Reverse complement motif     Consensus sequence: GBTGCAGGTGB

Dataset #: 3 Motif ID: 32 Motif name: ArntAhr

Original motif     Consensus sequence: YGCGTG Reverse complement motif     Consensus sequence: CACGCM

Best Matches for Top Significant Motif ID 32 (Highest to Lowest)

Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 6
Similarity score: 0.0396403

Alignment:
HVGCCCCGCCCCBB
----CACGCM----

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD

Dataset #: 1
Motif ID: 1
Motif name: Motif 1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 6
Similarity score: 0.040625

Alignment:
GCCCCGCC
--CACGCM

Original motif     Consensus sequence: GGCGGGGC Reverse complement motif     Consensus sequence: GCCCCGCC

Dataset #: 4
Motif ID: 42
Motif name: sSGTCACGTGACSs
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 6
Similarity score: 0.0412037

Alignment:
SGGTCACGTGACCS
----YGCGTG----

Original motif     Consensus sequence: SGGTCACGTGACCS Reverse complement motif     Consensus sequence: SGGTCACGTGACCS

Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 6
Number of overlap: 6
Similarity score: 0.0425089

Alignment:
BCCGCCCCGCCCCBB
-----CACGCM----

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB

Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 6
Similarity score: 0.0465867

Alignment:
MSGGGGCGGGGYSG
----YGCGTG----

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG

Dataset #: 5
Motif ID: 47
Motif name: TFW2
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.0469722

Alignment:
SCGCGCGG
-YGCGTG-

Original motif     Consensus sequence: SCGCGCGG Reverse complement motif     Consensus sequence: CCGCGCGS

Dataset #: 5
Motif ID: 48
Motif name: TFW3
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.0586806

Alignment:
CGGCYBCGCG
----YGCGTG

Original motif     Consensus sequence: CGGCYBCGCG Reverse complement motif     Consensus sequence: CGCGBMGCCG

Dataset #: 4
Motif ID: 40
Motif name: kcACCTGCAgc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 6
Similarity score: 0.0637286

Alignment:
BCACCTGCABC
-YGCGTG----

Original motif     Consensus sequence: BCACCTGCABC Reverse complement motif     Consensus sequence: GBTGCAGGTGB

Dataset #: 5
Motif ID: 50
Motif name: TFF11
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 6
Similarity score: 0.066121

Alignment:
GCVCCGCCMCCYCC
--CACGCM------

Original motif     Consensus sequence: GGMGGRGGCGGVGC Reverse complement motif     Consensus sequence: GCVCCGCCMCCYCC

Dataset #: 5
Motif ID: 46
Motif name: TFW1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.0756826

Alignment:
CGCGAC
CACGCM

Original motif     Consensus sequence: GTCGCG Reverse complement motif     Consensus sequence: CGCGAC

Dataset #: 1 Motif ID: 1 Motif name: Motif 1

Original motif     Consensus sequence: GGCGGGGC Reverse complement motif     Consensus sequence: GCCCCGCC

Best Matches for Top Significant Motif ID 1 (Highest to Lowest)

Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 8
Similarity score: 0

Alignment:
HVGCCCCGCCCCBB
--GCCCCGCC----

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD

Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 8
Similarity score: 0.00250079

Alignment:
BCCGCCCCGCCCCBB
---GCCCCGCC----

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB

Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.0149958

Alignment:
MSGGGGCGGGGYSG
----GGCGGGGC--

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG

Dataset #: 5
Motif ID: 50
Motif name: TFF11
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 7
Number of overlap: 8
Similarity score: 0.0348969

Alignment:
GGMGGRGGCGGVGC
------GGCGGGGC

Original motif     Consensus sequence: GGMGGRGGCGGVGC Reverse complement motif     Consensus sequence: GCVCCGCCMCCYCC

Dataset #: 3
Motif ID: 27
Motif name: Klf4
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0349983

Alignment:
DGGGYGKGGC
--GGCGGGGC

Original motif     Consensus sequence: DGGGYGKGGC Reverse complement motif     Consensus sequence: GCCYCMCCCD

Dataset #: 3
Motif ID: 22
Motif name: Zfx
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0708224

Alignment:
VAGGCCBBGGCVBB
---GCCCCGCC---

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB

Dataset #: 5
Motif ID: 48
Motif name: TFW3
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.071681

Alignment:
CGCGBMGCCG
-GCCCCGCC-

Original motif     Consensus sequence: CGGCYBCGCG Reverse complement motif     Consensus sequence: CGCGBMGCCG

Dataset #: 5
Motif ID: 49
Motif name: TFF1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0803996

Alignment:
CGGVGCCGCVGC
--GCCCCGCC--

Original motif     Consensus sequence: CGGVGCCGCVGC Reverse complement motif     Consensus sequence: GCVGCGGCBCCG

Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0853847

Alignment:
DGVBCABTGDWGCGKRRCSR
----------GGCGGGGC--

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD

Dataset #: 3
Motif ID: 23
Motif name: Egr1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0878731

Alignment:
YCGCCCACGCH
---GCCCCGCC

Original motif     Consensus sequence: HGCGTGGGCGK Reverse complement motif     Consensus sequence: YCGCCCACGCH

Dataset #: 5
Motif ID: 51
Motif name: TFM2
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0928252

Alignment:
CHCCBCCKMCTCCKCM
--GCCCCGCC------

Original motif     Consensus sequence: RGRGGAGRRGGHGGDG Reverse complement motif     Consensus sequence: CHCCBCCKMCTCCKCM

Dataset #: 5 Motif ID: 46 Motif name: TFW1

Original motif     Consensus sequence: GTCGCG Reverse complement motif     Consensus sequence: CGCGAC

Best Matches for Top Significant Motif ID 46 (Highest to Lowest)

Dataset #: 4
Motif ID: 42
Motif name: sSGTCACGTGACSs
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 7
Number of overlap: 6
Similarity score: 0.0375102

Alignment:
SGGTCACGTGACCS
--GTCGCG------

Original motif     Consensus sequence: SGGTCACGTGACCS Reverse complement motif     Consensus sequence: SGGTCACGTGACCS

Dataset #: 3
Motif ID: 33
Motif name: Mycn
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.0537993

Alignment:
GCCACGTGSD
----GTCGCG

Original motif     Consensus sequence: HSCACGTGGC Reverse complement motif     Consensus sequence: GCCACGTGSD

Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 7
Number of overlap: 6
Similarity score: 0.0539

Alignment:
HVGCCCCGCCCCBB
--GTCGCG------

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD

Dataset #: 1
Motif ID: 1
Motif name: Motif 1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 6
Similarity score: 0.0554263

Alignment:
GCCCCGCC
--GTCGCG

Original motif     Consensus sequence: GGCGGGGC Reverse complement motif     Consensus sequence: GCCCCGCC

Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.0558733

Alignment:
BBGGGGCGGGGCGGB
-------GTCGCG--

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB

Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 7
Number of overlap: 6
Similarity score: 0.0644512

Alignment:
CSKCCCCGCCCCSY
--CGCGAC------

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG

Dataset #: 3
Motif ID: 34
Motif name: Myc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 6
Similarity score: 0.0664905

Alignment:
DCCACGTGCV
----GTCGCG

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV

Dataset #: 3
Motif ID: 28
Motif name: E2F1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.0698654

Alignment:
TTTSGCGC
-GTCGCG-

Original motif     Consensus sequence: TTTSGCGC Reverse complement motif     Consensus sequence: GCGCSAAA

Dataset #: 3
Motif ID: 22
Motif name: Zfx
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 6
Number of overlap: 6
Similarity score: 0.069909

Alignment:
BBVGCCBVGGCCTV
---GTCGCG-----

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB

Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 7
Number of overlap: 6
Similarity score: 0.072456

Alignment:
MSGKKRCGCWDCABTGBBCD
------CGCGAC--------

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD

Dataset #: 5 Motif ID: 47 Motif name: TFW2

Original motif     Consensus sequence: SCGCGCGG Reverse complement motif     Consensus sequence: CCGCGCGS

Best Matches for Top Significant Motif ID 47 (Highest to Lowest)

Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0456233

Alignment:
HVGCCCCGCCCCBB
-CCGCGCGS-----

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD

Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 7
Number of overlap: 8
Similarity score: 0.045686

Alignment:
BBGGGGCGGGGCGGB
------SCGCGCGG-

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB

Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 6
Number of overlap: 8
Similarity score: 0.0504058

Alignment:
CSKCCCCGCCCCSY
-CCGCGCGS-----

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG

Dataset #: 3
Motif ID: 33
Motif name: Mycn
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0527532

Alignment:
HSCACGTGGC
-SCGCGCGG-

Original motif     Consensus sequence: HSCACGTGGC Reverse complement motif     Consensus sequence: GCCACGTGSD

Dataset #: 3
Motif ID: 34
Motif name: Myc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0574543

Alignment:
VGCACGTGGH
-SCGCGCGG-

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV

Dataset #: 3
Motif ID: 25
Motif name: TFAP2A
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0678925

Alignment:
SCMVBBGGC
-SCGCGCGG

Original motif     Consensus sequence: GCCBBVRGS Reverse complement motif     Consensus sequence: SCMVBBGGC

Dataset #: 3
Motif ID: 24
Motif name: SP1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.07018

Alignment:
CCCCKCCCCC
--CCGCGCGS

Original motif     Consensus sequence: CCCCKCCCCC Reverse complement motif     Consensus sequence: GGGGGYGGGG

Dataset #: 3
Motif ID: 22
Motif name: Zfx
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0710499

Alignment:
BBVGCCBVGGCCTV
--SCGCGCGG----

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB

Dataset #: 3
Motif ID: 27
Motif name: Klf4
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0768965

Alignment:
DGGGYGKGGC
-SCGCGCGG-

Original motif     Consensus sequence: DGGGYGKGGC Reverse complement motif     Consensus sequence: GCCYCMCCCD

Dataset #: 3
Motif ID: 26
Motif name: MIZF
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0837414

Alignment:
GCGGACGTTV
--SCGCGCGG

Original motif     Consensus sequence: BAACGTCCGC Reverse complement motif     Consensus sequence: GCGGACGTTV

Dataset #: 3 Motif ID: 29 Motif name: HIF1AARNT

Original motif     Consensus sequence: VBACGTGV Reverse complement motif     Consensus sequence: VCACGTBV

Best Matches for Top Significant Motif ID 29 (Highest to Lowest)

Dataset #: 4
Motif ID: 40
Motif name: kcACCTGCAgc
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0295473

Alignment:
GBTGCAGGTGB
---VCACGTBV

Original motif     Consensus sequence: BCACCTGCABC Reverse complement motif     Consensus sequence: GBTGCAGGTGB

Dataset #: 4
Motif ID: 42
Motif name: sSGTCACGTGACSs
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0314837

Alignment:
SGGTCACGTGACCS
---VCACGTBV---

Original motif     Consensus sequence: SGGTCACGTGACCS Reverse complement motif     Consensus sequence: SGGTCACGTGACCS

Dataset #: 4
Motif ID: 44
Motif name: dhACATTCTkh
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0640024

Alignment:
DHACATTCTGH
VCACGTBV---

Original motif     Consensus sequence: DHACATTCTGH Reverse complement motif     Consensus sequence: HCAGAATGTHD

Dataset #: 5
Motif ID: 47
Motif name: TFW2
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0660185

Alignment:
CCGCGCGS
VBACGTGV

Original motif     Consensus sequence: SCGCGCGG Reverse complement motif     Consensus sequence: CCGCGCGS

Dataset #: 5
Motif ID: 50
Motif name: TFF11
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.067219

Alignment:
GCVCCGCCMCCYCC
------VCACGTBV

Original motif     Consensus sequence: GGMGGRGGCGGVGC Reverse complement motif     Consensus sequence: GCVCCGCCMCCYCC

Dataset #: 5
Motif ID: 51
Motif name: TFM2
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 6
Number of overlap: 8
Similarity score: 0.0698117

Alignment:
CHCCBCCKMCTCCKCM
-----VCACGTBV---

Original motif     Consensus sequence: RGRGGAGRRGGHGGDG Reverse complement motif     Consensus sequence: CHCCBCCKMCTCCKCM

Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0711168

Alignment:
BBGGGGCGGGGCVD
---VBACGTGV---

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD

Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0735453

Alignment:
BBGGGGCGGGGCGGB
---VBACGTGV----

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB

Dataset #: 5
Motif ID: 54
Motif name: TFM12
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 12
Number of overlap: 8
Similarity score: 0.0757612

Alignment:
KKKAGGDGGAKKMGBBGKMG
-VBACGTGV-----------

Original motif     Consensus sequence: CYYCBBCYYYTCCHCCTYYY Reverse complement motif     Consensus sequence: KKKAGGDGGAKKMGBBGKMG

Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0775335

Alignment:
CSKCCCCGCCCCSY
---VCACGTBV---

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG

Dataset #: 3 Motif ID: 25 Motif name: TFAP2A

Original motif     Consensus sequence: GCCBBVRGS Reverse complement motif     Consensus sequence: SCMVBBGGC

Best Matches for Top Significant Motif ID 25 (Highest to Lowest)

Dataset #: 5
Motif ID: 50
Motif name: TFF11
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 9
Similarity score: 0.0415732

Alignment:
GGMGGRGGCGGVGC
SCMVBBGGC-----

Original motif     Consensus sequence: GGMGGRGGCGGVGC Reverse complement motif     Consensus sequence: GCVCCGCCMCCYCC

Dataset #: 5
Motif ID: 48
Motif name: TFW3
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 9
Similarity score: 0.0552877

Alignment:
CGGCYBCGCG
-GCCBBVRGS

Original motif     Consensus sequence: CGGCYBCGCG Reverse complement motif     Consensus sequence: CGCGBMGCCG

Dataset #: 5
Motif ID: 54
Motif name: TFM12
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 11
Number of overlap: 9
Similarity score: 0.0630429

Alignment:
KKKAGGDGGAKKMGBBGKMG
-SCMVBBGGC----------

Original motif     Consensus sequence: CYYCBBCYYYTCCHCCTYYY Reverse complement motif     Consensus sequence: KKKAGGDGGAKKMGBBGKMG

Dataset #: 5
Motif ID: 49
Motif name: TFF1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 9
Similarity score: 0.0669772

Alignment:
GCVGCGGCBCCG
SCMVBBGGC---

Original motif     Consensus sequence: CGGVGCCGCVGC Reverse complement motif     Consensus sequence: GCVGCGGCBCCG

Dataset #: 5
Motif ID: 51
Motif name: TFM2
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 9
Similarity score: 0.069755

Alignment:
CHCCBCCKMCTCCKCM
SCMVBBGGC-------

Original motif     Consensus sequence: RGRGGAGRRGGHGGDG Reverse complement motif     Consensus sequence: CHCCBCCKMCTCCKCM

Dataset #: 2
Motif ID: 2
Motif name: Motif 2
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 9
Similarity score: 0.0715961

Alignment:
MTMMTCMMTCTKCK
----SCMVBBGGC-

Original motif     Consensus sequence: RGRAGARRGARRAR Reverse complement motif     Consensus sequence: MTMMTCMMTCTKCK

Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 9
Similarity score: 0.0719489

Alignment:
BBGGGGCGGGGCGGB
-----GCCBBVRGS-

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB

Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 6
Number of overlap: 9
Similarity score: 0.0781606

Alignment:
MSGGGGCGGGGYSG
GCCBBVRGS-----

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG

Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 9
Similarity score: 0.0800026

Alignment:
BBGGGGCGGGGCVD
-----GCCBBVRGS

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD

Dataset #: 4
Motif ID: 40
Motif name: kcACCTGCAgc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 9
Similarity score: 0.0857416

Alignment:
BCACCTGCABC
--GCCBBVRGS

Original motif     Consensus sequence: BCACCTGCABC Reverse complement motif     Consensus sequence: GBTGCAGGTGB

Dataset #: 4 Motif ID: 41 Motif name: wwAAATAATAtw

Original motif     Consensus sequence: HDAAATAATADD Reverse complement motif     Consensus sequence: DDTATTATTTDH

Best Matches for Top Significant Motif ID 41 (Highest to Lowest)

Dataset #: 2
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 12
Similarity score: 0.0536028

Alignment:
AWAAAWTWAAASWA
-HDAAATAATADD-

Original motif     Consensus sequence: AWAAAWTWAAASWA Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

Dataset #: 5
Motif ID: 52
Motif name: TFM1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 7
Number of overlap: 12
Similarity score: 0.0565705

Alignment:
WTKTTTTTHWTTTTTTBT
------DDTATTATTTDH

Original motif     Consensus sequence: WTKTTTTTHWTTTTTTBT Reverse complement motif     Consensus sequence: ABAAAAAAWHAAAAARAW

Dataset #: 5
Motif ID: 56
Motif name: TFM11
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 12
Similarity score: 0.0575935

Alignment:
HDWVAAAHAAAAAMAAAMWWWHBWA
--HDAAATAATADD-----------

Original motif     Consensus sequence: HDWVAAAHAAAAAMAAAMWWWHBWA Reverse complement motif     Consensus sequence: TWVHWWWYTTTYTTTTTHTTTVWBH

Dataset #: 2
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 12
Similarity score: 0.0591821

Alignment:
AATHATATWTHAAA
--DDTATTATTTDH

Original motif     Consensus sequence: AATHATATWTHAAA Reverse complement motif     Consensus sequence: TTTDAWATATHATT

Dataset #: 5
Motif ID: 55
Motif name: TFM13
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.0712963

Alignment:
WAHHTVTTYKAAAAWTTRAT
--------HDAAATAATADD

Original motif     Consensus sequence: ATKAAWTTTTRMAABAHHTW Reverse complement motif     Consensus sequence: WAHHTVTTYKAAAAWTTRAT

Dataset #: 2
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 12
Similarity score: 0.0715278

Alignment:
AAATTKTATTTAWT
-DDTATTATTTDH-

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

Dataset #: 5
Motif ID: 53
Motif name: TFM3
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.0733516

Alignment:
WWHTTTTTCABAAWTTWA
------DDTATTATTTDH

Original motif     Consensus sequence: WWHTTTTTCABAAWTTWA Reverse complement motif     Consensus sequence: TWAAWTTVTGAAAAAHWW

Dataset #: 2
Motif ID: 16
Motif name: Motif 16
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.0912037

Alignment:
TCAAAATKAWTTGT
--DDTATTATTTDH

Original motif     Consensus sequence: ACAAWTRATTTTGA Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT

Dataset #: 2
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.0924576

Alignment:
WWTAKTTCDKAATT
DDTATTATTTDH--

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

Dataset #: 2
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 12
Similarity score: 0.0989198

Alignment:
TGATTTTAWKATTT
-DDTATTATTTDH-

Original motif     Consensus sequence: AAATRWTAAAATCA Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

Dataset #: 4 Motif ID: 37 Motif name: tkAAATAATAtw

Original motif     Consensus sequence: HDAAATAATAHW Reverse complement motif     Consensus sequence: WHTATTATTTDH

Best Matches for Top Significant Motif ID 37 (Highest to Lowest)

Dataset #: 2
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 12
Similarity score: 0.0522317

Alignment:
TWSTTTWAWTTTWT
-WHTATTATTTDH-

Original motif     Consensus sequence: AWAAAWTWAAASWA Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

Dataset #: 5
Motif ID: 56
Motif name: TFM11
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 12
Similarity score: 0.0590505

Alignment:
TWVHWWWYTTTYTTTTTHTTTVWBH
-----------WHTATTATTTDH--

Original motif     Consensus sequence: HDWVAAAHAAAAAMAAAMWWWHBWA Reverse complement motif     Consensus sequence: TWVHWWWYTTTYTTTTTHTTTVWBH

Dataset #: 5
Motif ID: 52
Motif name: TFM1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.0637702

Alignment:
ABAAAAAAWHAAAAARAW
HDAAATAATAHW------

Original motif     Consensus sequence: WTKTTTTTHWTTTTTTBT Reverse complement motif     Consensus sequence: ABAAAAAAWHAAAAARAW

Dataset #: 2
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.0641975

Alignment:
AATHATATWTHAAA
--WHTATTATTTDH

Original motif     Consensus sequence: AATHATATWTHAAA Reverse complement motif     Consensus sequence: TTTDAWATATHATT

Dataset #: 5
Motif ID: 55
Motif name: TFM13
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.0704475

Alignment:
ATKAAWTTTTRMAABAHHTW
WHTATTATTTDH--------

Original motif     Consensus sequence: ATKAAWTTTTRMAABAHHTW Reverse complement motif     Consensus sequence: WAHHTVTTYKAAAAWTTRAT

Dataset #: 2
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 12
Similarity score: 0.0704475

Alignment:
AAATTKTATTTAWT
-WHTATTATTTDH-

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

Dataset #: 5
Motif ID: 53
Motif name: TFM3
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.0763819

Alignment:
WWHTTTTTCABAAWTTWA
------WHTATTATTTDH

Original motif     Consensus sequence: WWHTTTTTCABAAWTTWA Reverse complement motif     Consensus sequence: TWAAWTTVTGAAAAAHWW

Dataset #: 2
Motif ID: 16
Motif name: Motif 16
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.0864198

Alignment:
TCAAAATKAWTTGT
--WHTATTATTTDH

Original motif     Consensus sequence: ACAAWTRATTTTGA Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT

Dataset #: 2
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.09076

Alignment:
WWTAKTTCDKAATT
WHTATTATTTDH--

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

Dataset #: 2
Motif ID: 19
Motif name: Motif 19
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 12
Similarity score: 0.096142

Alignment:
TWTAATCTAWGAA
WHTATTATTTDH-

Original motif     Consensus sequence: TTCWTAGATTAWA Reverse complement motif     Consensus sequence: TWTAATCTAWGAA


Significant Motifs - Global and Local Matching (Highest to Lowest)

Dataset #: 4 Motif ID: 45 Motif name: wbgTAAATAww

Original motif     Consensus sequence: DBGTAAATAHD Reverse complement motif     Consensus sequence: DHTATTTACBD

Best Matches for Significant Motif ID 45 (Highest to Lowest)

Dataset #: 4
Motif ID: 37
Motif name: tkAAATAATAtw
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0162338

Alignment:
HDAAATAATAHW
-DBGTAAATAHD

Original motif     Consensus sequence: HDAAATAATAHW Reverse complement motif     Consensus sequence: WHTATTATTTDH

Dataset #: 4
Motif ID: 41
Motif name: wwAAATAATAtw
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.0164863

Alignment:
DDTATTATTTDH
DHTATTTACBD-

Original motif     Consensus sequence: HDAAATAATADD Reverse complement motif     Consensus sequence: DDTATTATTTDH

Dataset #: 5
Motif ID: 56
Motif name: TFM11
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 15
Number of overlap: 11
Similarity score: 0.0192768

Alignment:
TWVHWWWYTTTYTTTTTHTTTVWBH
--------------DHTATTTACBD

Original motif     Consensus sequence: HDWVAAAHAAAAAMAAAMWWWHBWA Reverse complement motif     Consensus sequence: TWVHWWWYTTTYTTTTTHTTTVWBH

Dataset #: 2
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 11
Similarity score: 0.0250541

Alignment:
AATHATATWTHAAA
DHTATTTACBD---

Original motif     Consensus sequence: AATHATATWTHAAA Reverse complement motif     Consensus sequence: TTTDAWATATHATT

Dataset #: 2
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.027895

Alignment:
AATTYDGAARTAWW
---DBGTAAATAHD

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

Dataset #: 5
Motif ID: 52
Motif name: TFM1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0283217

Alignment:
ABAAAAAAWHAAAAARAW
DBGTAAATAHD-------

Original motif     Consensus sequence: WTKTTTTTHWTTTTTTBT Reverse complement motif     Consensus sequence: ABAAAAAAWHAAAAARAW

Dataset #: 5
Motif ID: 53
Motif name: TFM3
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.0308097

Alignment:
TWAAWTTVTGAAAAAHWW
------DBGTAAATAHD-

Original motif     Consensus sequence: WWHTTTTTCABAAWTTWA Reverse complement motif     Consensus sequence: TWAAWTTVTGAAAAAHWW

Dataset #: 5
Motif ID: 55
Motif name: TFM13
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 11
Similarity score: 0.0333874

Alignment:
ATKAAWTTTTRMAABAHHTW
-------DBGTAAATAHD--

Original motif     Consensus sequence: ATKAAWTTTTRMAABAHHTW Reverse complement motif     Consensus sequence: WAHHTVTTYKAAAAWTTRAT

Dataset #: 2
Motif ID: 4
Motif name: Motif 4
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0361187

Alignment:
AWGKAAWTTTT
DBGTAAATAHD

Original motif     Consensus sequence: AAAAWTTRCWT Reverse complement motif     Consensus sequence: AWGKAAWTTTT

Dataset #: 2
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.0410381

Alignment:
AWAAAWTWAAASWA
--DHTATTTACBD-

Original motif     Consensus sequence: AWAAAWTWAAASWA Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

Dataset #: 4 Motif ID: 44 Motif name: dhACATTCTkh

Original motif     Consensus sequence: DHACATTCTGH Reverse complement motif     Consensus sequence: HCAGAATGTHD

Best Matches for Significant Motif ID 44 (Highest to Lowest)

Dataset #: 5
Motif ID: 53
Motif name: TFM3
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 8
Number of overlap: 11
Similarity score: 0.0217516

Alignment:
TWAAWTTVTGAAAAAHWW
DHACATTCTGH-------

Original motif     Consensus sequence: WWHTTTTTCABAAWTTWA Reverse complement motif     Consensus sequence: TWAAWTTVTGAAAAAHWW

Dataset #: 4
Motif ID: 40
Motif name: kcACCTGCAgc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0238442

Alignment:
BCACCTGCABC
DHACATTCTGH

Original motif     Consensus sequence: BCACCTGCABC Reverse complement motif     Consensus sequence: GBTGCAGGTGB

Dataset #: 2
Motif ID: 16
Motif name: Motif 16
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 11
Similarity score: 0.0258838

Alignment:
TCAAAATKAWTTGT
HCAGAATGTHD---

Original motif     Consensus sequence: ACAAWTRATTTTGA Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT

Dataset #: 4
Motif ID: 41
Motif name: wwAAATAATAtw
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0292508

Alignment:
DDTATTATTTDH
-HCAGAATGTHD

Original motif     Consensus sequence: HDAAATAATADD Reverse complement motif     Consensus sequence: DDTATTATTTDH

Dataset #: 5
Motif ID: 56
Motif name: TFM11
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 11
Similarity score: 0.0307858

Alignment:
TWVHWWWYTTTYTTTTTHTTTVWBH
----DHACATTCTGH----------

Original motif     Consensus sequence: HDWVAAAHAAAAAMAAAMWWWHBWA Reverse complement motif     Consensus sequence: TWVHWWWYTTTYTTTTTHTTTVWBH

Dataset #: 5
Motif ID: 55
Motif name: TFM13
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 9
Number of overlap: 11
Similarity score: 0.0357323

Alignment:
ATKAAWTTTTRMAABAHHTW
-DHACATTCTGH--------

Original motif     Consensus sequence: ATKAAWTTTTRMAABAHHTW Reverse complement motif     Consensus sequence: WAHHTVTTYKAAAAWTTRAT

Dataset #: 4
Motif ID: 37
Motif name: tkAAATAATAtw
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.0364899

Alignment:
WHTATTATTTDH
-HCAGAATGTHD

Original motif     Consensus sequence: HDAAATAATAHW Reverse complement motif     Consensus sequence: WHTATTATTTDH

Dataset #: 2
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 11
Similarity score: 0.0400884

Alignment:
AATTYDGAARTAWW
HCAGAATGTHD---

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

Dataset #: 4
Motif ID: 39
Motif name: kCAGCCAATmr
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0412582

Alignment:
MBATTGGCTGH
DHACATTCTGH

Original motif     Consensus sequence: DCAGCCAATVR Reverse complement motif     Consensus sequence: MBATTGGCTGH

Dataset #: 3
Motif ID: 35
Motif name: GABPA
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0418896

Alignment:
CCGGAAGTGVV
HCAGAATGTHD

Original motif     Consensus sequence: CCGGAAGTGVV Reverse complement motif     Consensus sequence: VVCACTTCCGG

Dataset #: 3 Motif ID: 24 Motif name: SP1

Original motif     Consensus sequence: CCCCKCCCCC Reverse complement motif     Consensus sequence: GGGGGYGGGG

Best Matches for Significant Motif ID 24 (Highest to Lowest)

Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 10
Similarity score: 0.00451594

Alignment:
MSGGGGCGGGGYSG
-GGGGGYGGGG---

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG

Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 10
Similarity score: 0.00965796

Alignment:
HVGCCCCGCCCCBB
---CCCCKCCCCC-

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD

Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.0127292

Alignment:
BCCGCCCCGCCCCBB
----CCCCKCCCCC-

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB

Dataset #: 5
Motif ID: 50
Motif name: TFF11
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 10
Similarity score: 0.0174405

Alignment:
GGMGGRGGCGGVGC
---GGGGGYGGGG-

Original motif     Consensus sequence: GGMGGRGGCGGVGC Reverse complement motif     Consensus sequence: GCVCCGCCMCCYCC

Dataset #: 5
Motif ID: 54
Motif name: TFM12
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 7
Number of overlap: 10
Similarity score: 0.0301548

Alignment:
CYYCBBCYYYTCCHCCTYYY
------CCCCKCCCCC----

Original motif     Consensus sequence: CYYCBBCYYYTCCHCCTYYY Reverse complement motif     Consensus sequence: KKKAGGDGGAKKMGBBGKMG

Dataset #: 5
Motif ID: 51
Motif name: TFM2
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0329167

Alignment:
RGRGGAGRRGGHGGDG
------GGGGGYGGGG

Original motif     Consensus sequence: RGRGGAGRRGGHGGDG Reverse complement motif     Consensus sequence: CHCCBCCKMCTCCKCM

Dataset #: 3
Motif ID: 22
Motif name: Zfx
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 10
Similarity score: 0.0540825

Alignment:
BBVGCCBVGGCCTV
----GGGGGYGGGG

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB

Dataset #: 5
Motif ID: 49
Motif name: TFF1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.0557738

Alignment:
GCVGCGGCBCCG
-CCCCKCCCCC-

Original motif     Consensus sequence: CGGVGCCGCVGC Reverse complement motif     Consensus sequence: GCVGCGGCBCCG

Dataset #: 3
Motif ID: 30
Motif name: PLAG1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 10
Similarity score: 0.0600992

Alignment:
CCCCCTTGGGCCCC
-CCCCKCCCCC---

Original motif     Consensus sequence: GGGGCCCAAGGGGG Reverse complement motif     Consensus sequence: CCCCCTTGGGCCCC

Dataset #: 3
Motif ID: 27
Motif name: Klf4
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0637183

Alignment:
GCCYCMCCCD
CCCCKCCCCC

Original motif     Consensus sequence: DGGGYGKGGC Reverse complement motif     Consensus sequence: GCCYCMCCCD

Dataset #: 3 Motif ID: 32 Motif name: ArntAhr

Original motif     Consensus sequence: YGCGTG Reverse complement motif     Consensus sequence: CACGCM

Best Matches for Significant Motif ID 32 (Highest to Lowest)

Dataset #: 3
Motif ID: 23
Motif name: Egr1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0

Alignment:
YCGCCCACGCH
-----CACGCM

Original motif     Consensus sequence: HGCGTGGGCGK Reverse complement motif     Consensus sequence: YCGCCCACGCH

Dataset #: 3
Motif ID: 29
Motif name: HIF1AARNT
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.0112447

Alignment:
VBACGTGV
-YGCGTG-

Original motif     Consensus sequence: VBACGTGV Reverse complement motif     Consensus sequence: VCACGTBV

Dataset #: 3
Motif ID: 33
Motif name: Mycn
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 6
Similarity score: 0.0377949

Alignment:
GCCACGTGSD
--YGCGTG--

Original motif     Consensus sequence: HSCACGTGGC Reverse complement motif     Consensus sequence: GCCACGTGSD

Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 6
Similarity score: 0.0396403

Alignment:
HVGCCCCGCCCCBB
----CACGCM----

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD

Dataset #: 3
Motif ID: 34
Motif name: Myc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.0399214

Alignment:
DCCACGTGCV
--YGCGTG--

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV

Dataset #: 1
Motif ID: 1
Motif name: Motif 1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 6
Similarity score: 0.040625

Alignment:
GCCCCGCC
--CACGCM

Original motif     Consensus sequence: GGCGGGGC Reverse complement motif     Consensus sequence: GCCCCGCC

Dataset #: 4
Motif ID: 42
Motif name: sSGTCACGTGACSs
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 6
Similarity score: 0.0412037

Alignment:
SGGTCACGTGACCS
----YGCGTG----

Original motif     Consensus sequence: SGGTCACGTGACCS Reverse complement motif     Consensus sequence: SGGTCACGTGACCS

Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 6
Number of overlap: 6
Similarity score: 0.0425089

Alignment:
BCCGCCCCGCCCCBB
-----CACGCM----

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB

Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 6
Similarity score: 0.0465867

Alignment:
MSGGGGCGGGGYSG
----YGCGTG----

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG

Dataset #: 5
Motif ID: 47
Motif name: TFW2
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.0469722

Alignment:
SCGCGCGG
-YGCGTG-

Original motif     Consensus sequence: SCGCGCGG Reverse complement motif     Consensus sequence: CCGCGCGS

Dataset #: 4 Motif ID: 40 Motif name: kcACCTGCAgc

Original motif     Consensus sequence: BCACCTGCABC Reverse complement motif     Consensus sequence: GBTGCAGGTGB

Best Matches for Significant Motif ID 40 (Highest to Lowest)

Dataset #: 4
Motif ID: 43
Motif name: wsTACwGTAsw
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0215284

Alignment:
DBTACWGTAVH
BCACCTGCABC

Original motif     Consensus sequence: HVTACWGTABD Reverse complement motif     Consensus sequence: DBTACWGTAVH

Dataset #: 4
Motif ID: 44
Motif name: dhACATTCTkh
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0254134

Alignment:
DHACATTCTGH
BCACCTGCABC

Original motif     Consensus sequence: DHACATTCTGH Reverse complement motif     Consensus sequence: HCAGAATGTHD

Dataset #: 4
Motif ID: 42
Motif name: sSGTCACGTGACSs
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 11
Similarity score: 0.031338

Alignment:
SGGTCACGTGACCS
---BCACCTGCABC

Original motif     Consensus sequence: SGGTCACGTGACCS Reverse complement motif     Consensus sequence: SGGTCACGTGACCS

Dataset #: 5
Motif ID: 50
Motif name: TFF11
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 11
Similarity score: 0.034471

Alignment:
GCVCCGCCMCCYCC
BCACCTGCABC---

Original motif     Consensus sequence: GGMGGRGGCGGVGC Reverse complement motif     Consensus sequence: GCVCCGCCMCCYCC

Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.0402518

Alignment:
HVGCCCCGCCCCBB
-BCACCTGCABC--

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD

Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.0411257

Alignment:
CSKCCCCGCCCCSY
-BCACCTGCABC--

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG

Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 11
Similarity score: 0.0420218

Alignment:
DGVBCABTGDWGCGKRRCSR
----GBTGCAGGTGB-----

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD

Dataset #: 3
Motif ID: 35
Motif name: GABPA
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0423275

Alignment:
CCGGAAGTGVV
GBTGCAGGTGB

Original motif     Consensus sequence: CCGGAAGTGVV Reverse complement motif     Consensus sequence: VVCACTTCCGG

Dataset #: 4
Motif ID: 39
Motif name: kCAGCCAATmr
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0439586

Alignment:
DCAGCCAATVR
GBTGCAGGTGB

Original motif     Consensus sequence: DCAGCCAATVR Reverse complement motif     Consensus sequence: MBATTGGCTGH

Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 11
Similarity score: 0.0461444

Alignment:
BCCGCCCCGCCCCBB
--BCACCTGCABC--

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB

Dataset #: 4 Motif ID: 43 Motif name: wsTACwGTAsw

Original motif     Consensus sequence: HVTACWGTABD Reverse complement motif     Consensus sequence: DBTACWGTAVH

Best Matches for Significant Motif ID 43 (Highest to Lowest)

Dataset #: 4
Motif ID: 40
Motif name: kcACCTGCAgc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0199592

Alignment:
GBTGCAGGTGB
HVTACWGTABD

Original motif     Consensus sequence: BCACCTGCABC Reverse complement motif     Consensus sequence: GBTGCAGGTGB

Dataset #: 4
Motif ID: 41
Motif name: wwAAATAATAtw
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0309343

Alignment:
DDTATTATTTDH
-HVTACWGTABD

Original motif     Consensus sequence: HDAAATAATADD Reverse complement motif     Consensus sequence: DDTATTATTTDH

Dataset #: 4
Motif ID: 37
Motif name: tkAAATAATAtw
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0337121

Alignment:
WHTATTATTTDH
-HVTACWGTABD

Original motif     Consensus sequence: HDAAATAATAHW Reverse complement motif     Consensus sequence: WHTATTATTTDH

Dataset #: 2
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 11
Similarity score: 0.0353535

Alignment:
AATTYDGAARTAWW
HVTACWGTABD---

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

Dataset #: 4
Motif ID: 45
Motif name: wbgTAAATAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.037518

Alignment:
DBGTAAATAHD
DBTACWGTAVH

Original motif     Consensus sequence: DBGTAAATAHD Reverse complement motif     Consensus sequence: DHTATTTACBD

Dataset #: 2
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 11
Similarity score: 0.0397727

Alignment:
TTTDAWATATHATT
DBTACWGTAVH---

Original motif     Consensus sequence: AATHATATWTHAAA Reverse complement motif     Consensus sequence: TTTDAWATATHATT

Dataset #: 5
Motif ID: 53
Motif name: TFM3
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 5
Number of overlap: 11
Similarity score: 0.0413797

Alignment:
TWAAWTTVTGAAAAAHWW
---HVTACWGTABD----

Original motif     Consensus sequence: WWHTTTTTCABAAWTTWA Reverse complement motif     Consensus sequence: TWAAWTTVTGAAAAAHWW

Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 6
Number of overlap: 11
Similarity score: 0.042298

Alignment:
DGVBCABTGDWGCGKRRCSR
-----HVTACWGTABD----

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD

Dataset #: 5
Motif ID: 55
Motif name: TFM13
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 11
Similarity score: 0.0445707

Alignment:
ATKAAWTTTTRMAABAHHTW
-------DBTACWGTAVH--

Original motif     Consensus sequence: ATKAAWTTTTRMAABAHHTW Reverse complement motif     Consensus sequence: WAHHTVTTYKAAAAWTTRAT

Dataset #: 2
Motif ID: 19
Motif name: Motif 19
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 11
Similarity score: 0.0460859

Alignment:
TTCWTAGATTAWA
DBTACWGTAVH--

Original motif     Consensus sequence: TTCWTAGATTAWA Reverse complement motif     Consensus sequence: TWTAATCTAWGAA

Dataset #: 2 Motif ID: 21 Motif name: Motif 21

Original motif     Consensus sequence: ATAAAA Reverse complement motif     Consensus sequence: TTTTAT

Best Matches for Significant Motif ID 21 (Highest to Lowest)

Dataset #: 2
Motif ID: 15
Motif name: Motif 15
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0

Alignment:
TTTTATTGTYAT
TTTTAT------

Original motif     Consensus sequence: ATMACAATAAAA Reverse complement motif     Consensus sequence: TTTTATTGTYAT

Dataset #: 2
Motif ID: 11
Motif name: Motif 11
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 5
Number of overlap: 6
Similarity score: 0.0208333

Alignment:
TTTCATWAAAT
-ATAAAA----

Original motif     Consensus sequence: ATTTWATGAAA Reverse complement motif     Consensus sequence: TTTCATWAAAT

Dataset #: 2
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 6
Number of overlap: 6
Similarity score: 0.0208333

Alignment:
AAATRWTAAAATCA
-----ATAAAA---

Original motif     Consensus sequence: AAATRWTAAAATCA Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

Dataset #: 2
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 6
Number of overlap: 6
Similarity score: 0.0208333

Alignment:
AAATTKTATTTAWT
---TTTTAT-----

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

Dataset #: 2
Motif ID: 10
Motif name: Motif 10
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.0416667

Alignment:
TTTCATAAWT
----TTTTAT

Original motif     Consensus sequence: TTTCATAAWT Reverse complement motif     Consensus sequence: AWTTATGAAA

Dataset #: 2
Motif ID: 14
Motif name: Motif 14
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0.0625

Alignment:
AWAAATAA
ATAAAA--

Original motif     Consensus sequence: AWAAATAA Reverse complement motif     Consensus sequence: TTATTTWT

Dataset #: 2
Motif ID: 19
Motif name: Motif 19
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 8
Number of overlap: 6
Similarity score: 0.0625

Alignment:
TWTAATCTAWGAA
TTTTAT-------

Original motif     Consensus sequence: TTCWTAGATTAWA Reverse complement motif     Consensus sequence: TWTAATCTAWGAA

Dataset #: 2
Motif ID: 20
Motif name: Motif 20
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 6
Number of overlap: 6
Similarity score: 0.0625

Alignment:
TTMAAAGATTT
ATAAAA-----

Original motif     Consensus sequence: TTMAAAGATTT Reverse complement motif     Consensus sequence: AAATCTTTYAA

Dataset #: 4
Motif ID: 41
Motif name: wwAAATAATAtw
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 6
Similarity score: 0.0632716

Alignment:
DDTATTATTTDH
--TTTTAT----

Original motif     Consensus sequence: HDAAATAATADD Reverse complement motif     Consensus sequence: DDTATTATTTDH

Dataset #: 2
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 6
Similarity score: 0.0689103

Alignment:
TWSTTTWAWTTTWT
---TTTTAT-----

Original motif     Consensus sequence: AWAAAWTWAAASWA Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

Dataset #: 3 Motif ID: 29 Motif name: HIF1AARNT

Original motif     Consensus sequence: VBACGTGV Reverse complement motif     Consensus sequence: VCACGTBV

Best Matches for Significant Motif ID 29 (Highest to Lowest)

Dataset #: 3
Motif ID: 33
Motif name: Mycn
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0123101

Alignment:
GCCACGTGSD
-VBACGTGV-

Original motif     Consensus sequence: HSCACGTGGC Reverse complement motif     Consensus sequence: GCCACGTGSD

Dataset #: 3
Motif ID: 34
Motif name: Myc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0144491

Alignment:
DCCACGTGCV
-VBACGTGV-

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV

Dataset #: 4
Motif ID: 40
Motif name: kcACCTGCAgc
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0295473

Alignment:
GBTGCAGGTGB
---VCACGTBV

Original motif     Consensus sequence: BCACCTGCABC Reverse complement motif     Consensus sequence: GBTGCAGGTGB

Dataset #: 4
Motif ID: 42
Motif name: sSGTCACGTGACSs
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0314837

Alignment:
SGGTCACGTGACCS
---VCACGTBV---

Original motif     Consensus sequence: SGGTCACGTGACCS Reverse complement motif     Consensus sequence: SGGTCACGTGACCS

Dataset #: 3
Motif ID: 26
Motif name: MIZF
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0377204

Alignment:
GCGGACGTTV
--VCACGTBV

Original motif     Consensus sequence: BAACGTCCGC Reverse complement motif     Consensus sequence: GCGGACGTTV

Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 8
Number of overlap: 8
Similarity score: 0.0556891

Alignment:
MSGKKRCGCWDCABTGBBCD
-----VCACGTBV-------

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD

Dataset #: 4
Motif ID: 44
Motif name: dhACATTCTkh
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0640024

Alignment:
DHACATTCTGH
VCACGTBV---

Original motif     Consensus sequence: DHACATTCTGH Reverse complement motif     Consensus sequence: HCAGAATGTHD

Dataset #: 3
Motif ID: 35
Motif name: GABPA
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0648153

Alignment:
CCGGAAGTGVV
--VCACGTBV-

Original motif     Consensus sequence: CCGGAAGTGVV Reverse complement motif     Consensus sequence: VVCACTTCCGG

Dataset #: 5
Motif ID: 47
Motif name: TFW2
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0660185

Alignment:
CCGCGCGS
VBACGTGV

Original motif     Consensus sequence: SCGCGCGG Reverse complement motif     Consensus sequence: CCGCGCGS

Dataset #: 5
Motif ID: 50
Motif name: TFF11
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.067219

Alignment:
GCVCCGCCMCCYCC
------VCACGTBV

Original motif     Consensus sequence: GGMGGRGGCGGVGC Reverse complement motif     Consensus sequence: GCVCCGCCMCCYCC

Dataset #: 3 Motif ID: 27 Motif name: Klf4

Original motif     Consensus sequence: DGGGYGKGGC Reverse complement motif     Consensus sequence: GCCYCMCCCD

Best Matches for Significant Motif ID 27 (Highest to Lowest)

Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 10
Similarity score: 0.0152457

Alignment:
CSKCCCCGCCCCSY
--GCCYCMCCCD--

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG

Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 10
Similarity score: 0.0160185

Alignment:
BBGGGGCGGGGCVD
--DGGGYGKGGC--

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD

Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 10
Similarity score: 0.0194893

Alignment:
BBGGGGCGGGGCGGB
--DGGGYGKGGC---

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB

Dataset #: 5
Motif ID: 50
Motif name: TFF11
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 10
Similarity score: 0.0402906

Alignment:
GGMGGRGGCGGVGC
----DGGGYGKGGC

Original motif     Consensus sequence: GGMGGRGGCGGVGC Reverse complement motif     Consensus sequence: GCVCCGCCMCCYCC

Dataset #: 5
Motif ID: 54
Motif name: TFM12
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 7
Number of overlap: 10
Similarity score: 0.0556427

Alignment:
CYYCBBCYYYTCCHCCTYYY
----GCCYCMCCCD------

Original motif     Consensus sequence: CYYCBBCYYYTCCHCCTYYY Reverse complement motif     Consensus sequence: KKKAGGDGGAKKMGBBGKMG

Dataset #: 5
Motif ID: 51
Motif name: TFM2
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 10
Similarity score: 0.0606033

Alignment:
CHCCBCCKMCTCCKCM
----GCCYCMCCCD--

Original motif     Consensus sequence: RGRGGAGRRGGHGGDG Reverse complement motif     Consensus sequence: CHCCBCCKMCTCCKCM

Dataset #: 3
Motif ID: 22
Motif name: Zfx
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 10
Similarity score: 0.0623591

Alignment:
BBVGCCBVGGCCTV
-GCCYCMCCCD---

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB

Dataset #: 3
Motif ID: 24
Motif name: SP1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0663136

Alignment:
GGGGGYGGGG
DGGGYGKGGC

Original motif     Consensus sequence: CCCCKCCCCC Reverse complement motif     Consensus sequence: GGGGGYGGGG

Dataset #: 3
Motif ID: 34
Motif name: Myc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0686848

Alignment:
VGCACGTGGH
DGGGYGKGGC

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV

Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 9
Number of overlap: 10
Similarity score: 0.06956

Alignment:
DGVBCABTGDWGCGKRRCSR
--------DGGGYGKGGC--

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD

Dataset #: 3 Motif ID: 35 Motif name: GABPA

Original motif     Consensus sequence: CCGGAAGTGVV Reverse complement motif     Consensus sequence: VVCACTTCCGG

Best Matches for Significant Motif ID 35 (Highest to Lowest)

Dataset #: 5
Motif ID: 54
Motif name: TFM12
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 11
Similarity score: 0.0360984

Alignment:
CYYCBBCYYYTCCHCCTYYY
----VVCACTTCCGG-----

Original motif     Consensus sequence: CYYCBBCYYYTCCHCCTYYY Reverse complement motif     Consensus sequence: KKKAGGDGGAKKMGBBGKMG

Dataset #: 5
Motif ID: 51
Motif name: TFM2
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 11
Similarity score: 0.0445566

Alignment:
RGRGGAGRRGGHGGDG
-CCGGAAGTGVV----

Original motif     Consensus sequence: RGRGGAGRRGGHGGDG Reverse complement motif     Consensus sequence: CHCCBCCKMCTCCKCM

Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 8
Number of overlap: 11
Similarity score: 0.0446257

Alignment:
DGVBCABTGDWGCGKRRCSR
-------VVCACTTCCGG--

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD

Dataset #: 3
Motif ID: 22
Motif name: Zfx
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0457327

Alignment:
BBVGCCBVGGCCTV
VVCACTTCCGG---

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB

Dataset #: 4
Motif ID: 40
Motif name: kcACCTGCAgc
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0483841

Alignment:
BCACCTGCABC
VVCACTTCCGG

Original motif     Consensus sequence: BCACCTGCABC Reverse complement motif     Consensus sequence: GBTGCAGGTGB

Dataset #: 4
Motif ID: 45
Motif name: wbgTAAATAww
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0492127

Alignment:
DBGTAAATAHD
CCGGAAGTGVV

Original motif     Consensus sequence: DBGTAAATAHD Reverse complement motif     Consensus sequence: DHTATTTACBD

Dataset #: 4
Motif ID: 44
Motif name: dhACATTCTkh
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0495154

Alignment:
DHACATTCTGH
VVCACTTCCGG

Original motif     Consensus sequence: DHACATTCTGH Reverse complement motif     Consensus sequence: HCAGAATGTHD

Dataset #: 5
Motif ID: 50
Motif name: TFF11
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.0504656

Alignment:
GGMGGRGGCGGVGC
-CCGGAAGTGVV--

Original motif     Consensus sequence: GGMGGRGGCGGVGC Reverse complement motif     Consensus sequence: GCVCCGCCMCCYCC

Dataset #: 2
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0518418

Alignment:
AATTYDGAARTAWW
---CCGGAAGTGVV

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.0554249

Alignment:
BCCGCCCCGCCCCBB
---VVCACTTCCGG-

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB


Best Matches for Each Motif (Highest to Lowest)

Dataset #: 1 Motif ID: 1 Motif name: Motif 1

Original motif     Consensus sequence: GGCGGGGC Reverse complement motif     Consensus sequence: GCCCCGCC

Best Matches for Motif ID 1 (Highest to Lowest)

Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 8
Similarity score: 0

Alignment:
HVGCCCCGCCCCBB
--GCCCCGCC----

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD

Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 8
Similarity score: 0.00250079

Alignment:
BCCGCCCCGCCCCBB
---GCCCCGCC----

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB

Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.0149958

Alignment:
MSGGGGCGGGGYSG
----GGCGGGGC--

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG

Dataset #: 5
Motif ID: 50
Motif name: TFF11
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 7
Number of overlap: 8
Similarity score: 0.0348969

Alignment:
GGMGGRGGCGGVGC
------GGCGGGGC

Original motif     Consensus sequence: GGMGGRGGCGGVGC Reverse complement motif     Consensus sequence: GCVCCGCCMCCYCC

Dataset #: 3
Motif ID: 27
Motif name: Klf4
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0349983

Alignment:
DGGGYGKGGC
--GGCGGGGC

Original motif     Consensus sequence: DGGGYGKGGC Reverse complement motif     Consensus sequence: GCCYCMCCCD

Dataset #: 3
Motif ID: 22
Motif name: Zfx
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0708224

Alignment:
VAGGCCBBGGCVBB
---GCCCCGCC---

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB

Dataset #: 5
Motif ID: 48
Motif name: TFW3
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.071681

Alignment:
CGCGBMGCCG
-GCCCCGCC-

Original motif     Consensus sequence: CGGCYBCGCG Reverse complement motif     Consensus sequence: CGCGBMGCCG

Dataset #: 5
Motif ID: 49
Motif name: TFF1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0803996

Alignment:
CGGVGCCGCVGC
--GCCCCGCC--

Original motif     Consensus sequence: CGGVGCCGCVGC Reverse complement motif     Consensus sequence: GCVGCGGCBCCG

Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0853847

Alignment:
DGVBCABTGDWGCGKRRCSR
----------GGCGGGGC--

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD

Dataset #: 3
Motif ID: 23
Motif name: Egr1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0878731

Alignment:
YCGCCCACGCH
---GCCCCGCC

Original motif     Consensus sequence: HGCGTGGGCGK Reverse complement motif     Consensus sequence: YCGCCCACGCH

Dataset #: 5
Motif ID: 51
Motif name: TFM2
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0928252

Alignment:
CHCCBCCKMCTCCKCM
--GCCCCGCC------

Original motif     Consensus sequence: RGRGGAGRRGGHGGDG Reverse complement motif     Consensus sequence: CHCCBCCKMCTCCKCM

Dataset #: 2 Motif ID: 2 Motif name: Motif 2

Original motif     Consensus sequence: RGRAGARRGARRAR Reverse complement motif     Consensus sequence: MTMMTCMMTCTKCK

Best Matches for Motif ID 2 (Highest to Lowest)

Dataset #: 5
Motif ID: 51
Motif name: TFM2
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.00948131

Alignment:
RGRGGAGRRGGHGGDG
--RGRAGARRGARRAR

Original motif     Consensus sequence: RGRGGAGRRGGHGGDG Reverse complement motif     Consensus sequence: CHCCBCCKMCTCCKCM

Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 7
Number of overlap: 14
Similarity score: 0.047364

Alignment:
MSGKKRCGCWDCABTGBBCD
------MTMMTCMMTCTKCK

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD

Dataset #: 5
Motif ID: 56
Motif name: TFM11
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 14
Similarity score: 0.0541717

Alignment:
HDWVAAAHAAAAAMAAAMWWWHBWA
---------RGRAGARRGARRAR--

Original motif     Consensus sequence: HDWVAAAHAAAAAMAAAMWWWHBWA Reverse complement motif     Consensus sequence: TWVHWWWYTTTYTTTTTHTTTVWBH

Dataset #: 5
Motif ID: 54
Motif name: TFM12
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 7
Number of overlap: 14
Similarity score: 0.0545069

Alignment:
CYYCBBCYYYTCCHCCTYYY
------MTMMTCMMTCTKCK

Original motif     Consensus sequence: CYYCBBCYYYTCCHCCTYYY Reverse complement motif     Consensus sequence: KKKAGGDGGAKKMGBBGKMG

Dataset #: 5
Motif ID: 52
Motif name: TFM1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 14
Similarity score: 0.0558935

Alignment:
ABAAAAAAWHAAAAARAW
-RGRAGARRGARRAR---

Original motif     Consensus sequence: WTKTTTTTHWTTTTTTBT Reverse complement motif     Consensus sequence: ABAAAAAAWHAAAAARAW

Dataset #: 5
Motif ID: 50
Motif name: TFF11
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0689626

Alignment:
GGMGGRGGCGGVGC
RGRAGARRGARRAR

Original motif     Consensus sequence: GGMGGRGGCGGVGC Reverse complement motif     Consensus sequence: GCVCCGCCMCCYCC

Dataset #: 5
Motif ID: 53
Motif name: TFM3
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 14
Similarity score: 0.0775356

Alignment:
TWAAWTTVTGAAAAAHWW
-RGRAGARRGARRAR---

Original motif     Consensus sequence: WWHTTTTTCABAAWTTWA Reverse complement motif     Consensus sequence: TWAAWTTVTGAAAAAHWW

Dataset #: 2
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 13
Similarity score: 0.57507

Alignment:
AWAAAWTWAAASWA-
-RGRAGARRGARRAR

Original motif     Consensus sequence: AWAAAWTWAAASWA Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

Dataset #: 5
Motif ID: 55
Motif name: TFM13
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 9
Number of overlap: 12
Similarity score: 1.0763

Alignment:
ATKAAWTTTTRMAABAHHTW--
--------MTMMTCMMTCTKCK

Original motif     Consensus sequence: ATKAAWTTTTRMAABAHHTW Reverse complement motif     Consensus sequence: WAHHTVTTYKAAAAWTTRAT

Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 11
Similarity score: 1.57133

Alignment:
---MSGGGGCGGGGYSG
RGRAGARRGARRAR---

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG

Dataset #: 2 Motif ID: 3 Motif name: Motif 3

Original motif     Consensus sequence: AWAAAWTWAAASWA Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

Best Matches for Motif ID 3 (Highest to Lowest)

Dataset #: 5
Motif ID: 56
Motif name: TFM11
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 7
Number of overlap: 14
Similarity score: 0.0137914

Alignment:
HDWVAAAHAAAAAMAAAMWWWHBWA
------AWAAAWTWAAASWA-----

Original motif     Consensus sequence: HDWVAAAHAAAAAMAAAMWWWHBWA Reverse complement motif     Consensus sequence: TWVHWWWYTTTYTTTTTHTTTVWBH

Dataset #: 5
Motif ID: 52
Motif name: TFM1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 14
Similarity score: 0.0162962

Alignment:
ABAAAAAAWHAAAAARAW
----AWAAAWTWAAASWA

Original motif     Consensus sequence: WTKTTTTTHWTTTTTTBT Reverse complement motif     Consensus sequence: ABAAAAAAWHAAAAARAW

Dataset #: 5
Motif ID: 55
Motif name: TFM13
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 14
Similarity score: 0.037679

Alignment:
ATKAAWTTTTRMAABAHHTW
--AWAAAWTWAAASWA----

Original motif     Consensus sequence: ATKAAWTTTTRMAABAHHTW Reverse complement motif     Consensus sequence: WAHHTVTTYKAAAAWTTRAT

Dataset #: 2
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0423952

Alignment:
TGATTTTAWKATTT
TWSTTTWAWTTTWT

Original motif     Consensus sequence: AAATRWTAAAATCA Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

Dataset #: 5
Motif ID: 53
Motif name: TFM3
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 14
Similarity score: 0.0456419

Alignment:
TWAAWTTVTGAAAAAHWW
----AWAAAWTWAAASWA

Original motif     Consensus sequence: WWHTTTTTCABAAWTTWA Reverse complement motif     Consensus sequence: TWAAWTTVTGAAAAAHWW

Dataset #: 2
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0478896

Alignment:
AAATTKTATTTAWT
TWSTTTWAWTTTWT

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

Dataset #: 2
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0624272

Alignment:
TTTDAWATATHATT
AWAAAWTWAAASWA

Original motif     Consensus sequence: AATHATATWTHAAA Reverse complement motif     Consensus sequence: TTTDAWATATHATT

Dataset #: 2
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0702111

Alignment:
WWTAKTTCDKAATT
TWSTTTWAWTTTWT

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

Dataset #: 2
Motif ID: 2
Motif name: Motif 2
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 13
Similarity score: 0.567825

Alignment:
-RGRAGARRGARRAR
AWAAAWTWAAASWA-

Original motif     Consensus sequence: RGRAGARRGARRAR Reverse complement motif     Consensus sequence: MTMMTCMMTCTKCK

Dataset #: 4
Motif ID: 41
Motif name: wwAAATAATAtw
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 1.0432

Alignment:
HDAAATAATADD--
AWAAAWTWAAASWA

Original motif     Consensus sequence: HDAAATAATADD Reverse complement motif     Consensus sequence: DDTATTATTTDH

Dataset #: 2 Motif ID: 4 Motif name: Motif 4

Original motif     Consensus sequence: AAAAWTTRCWT Reverse complement motif     Consensus sequence: AWGKAAWTTTT

Best Matches for Motif ID 4 (Highest to Lowest)

Dataset #: 5
Motif ID: 56
Motif name: TFM11
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 14
Number of overlap: 11
Similarity score: 0.0718583

Alignment:
HDWVAAAHAAAAAMAAAMWWWHBWA
-------------AAAAWTTRCWT-

Original motif     Consensus sequence: HDWVAAAHAAAAAMAAAMWWWHBWA Reverse complement motif     Consensus sequence: TWVHWWWYTTTYTTTTTHTTTVWBH

Dataset #: 5
Motif ID: 55
Motif name: TFM13
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0727073

Alignment:
ATKAAWTTTTRMAABAHHTW
AWGKAAWTTTT---------

Original motif     Consensus sequence: ATKAAWTTTTRMAABAHHTW Reverse complement motif     Consensus sequence: WAHHTVTTYKAAAAWTTRAT

Dataset #: 5
Motif ID: 52
Motif name: TFM1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 11
Similarity score: 0.0748297

Alignment:
WTKTTTTTHWTTTTTTBT
---AWGKAAWTTTT----

Original motif     Consensus sequence: WTKTTTTTHWTTTTTTBT Reverse complement motif     Consensus sequence: ABAAAAAAWHAAAAARAW

Dataset #: 2
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 11
Similarity score: 0.0786484

Alignment:
AAATTKTATTTAWT
AAAAWTTRCWT---

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

Dataset #: 2
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 11
Similarity score: 0.0820375

Alignment:
AATHATATWTHAAA
AWGKAAWTTTT---

Original motif     Consensus sequence: AATHATATWTHAAA Reverse complement motif     Consensus sequence: TTTDAWATATHATT

Dataset #: 2
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 11
Similarity score: 0.083433

Alignment:
TGATTTTAWKATTT
---AWGKAAWTTTT

Original motif     Consensus sequence: AAATRWTAAAATCA Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

Dataset #: 2
Motif ID: 16
Motif name: Motif 16
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0852273

Alignment:
ACAAWTRATTTTGA
AAAAWTTRCWT---

Original motif     Consensus sequence: ACAAWTRATTTTGA Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT

Dataset #: 5
Motif ID: 53
Motif name: TFM3
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0858797

Alignment:
WWHTTTTTCABAAWTTWA
-------AWGKAAWTTTT

Original motif     Consensus sequence: WWHTTTTTCABAAWTTWA Reverse complement motif     Consensus sequence: TWAAWTTVTGAAAAAHWW

Dataset #: 4
Motif ID: 45
Motif name: wbgTAAATAww
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.086338

Alignment:
DHTATTTACBD
AAAAWTTRCWT

Original motif     Consensus sequence: DBGTAAATAHD Reverse complement motif     Consensus sequence: DHTATTTACBD

Dataset #: 2
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.0867914

Alignment:
TWSTTTWAWTTTWT
--AWGKAAWTTTT-

Original motif     Consensus sequence: AWAAAWTWAAASWA Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

Dataset #: 2 Motif ID: 5 Motif name: Motif 5

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

Best Matches for Motif ID 5 (Highest to Lowest)

Dataset #: 2
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.101648

Alignment:
TWSTTTWAWTTTWT
AAATTKTATTTAWT

Original motif     Consensus sequence: AWAAAWTWAAASWA Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

Dataset #: 2
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.107143

Alignment:
TGATTTTAWKATTT
AAATTKTATTTAWT

Original motif     Consensus sequence: AAATRWTAAAATCA Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

Dataset #: 5
Motif ID: 56
Motif name: TFM11
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 6
Number of overlap: 14
Similarity score: 0.109769

Alignment:
TWVHWWWYTTTYTTTTTHTTTVWBH
------AAATTKTATTTAWT-----

Original motif     Consensus sequence: HDWVAAAHAAAAAMAAAMWWWHBWA Reverse complement motif     Consensus sequence: TWVHWWWYTTTYTTTTTHTTTVWBH

Dataset #: 5
Motif ID: 52
Motif name: TFM1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 14
Similarity score: 0.110348

Alignment:
WTKTTTTTHWTTTTTTBT
-AAATTKTATTTAWT---

Original motif     Consensus sequence: WTKTTTTTHWTTTTTTBT Reverse complement motif     Consensus sequence: ABAAAAAAWHAAAAARAW

Dataset #: 2
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.111607

Alignment:
AATTYDGAARTAWW
AAATTKTATTTAWT

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

Dataset #: 5
Motif ID: 53
Motif name: TFM3
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 14
Similarity score: 0.124188

Alignment:
WWHTTTTTCABAAWTTWA
--AWTAAATAYAATTT--

Original motif     Consensus sequence: WWHTTTTTCABAAWTTWA Reverse complement motif     Consensus sequence: TWAAWTTVTGAAAAAHWW

Dataset #: 2
Motif ID: 16
Motif name: Motif 16
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.125

Alignment:
ACAAWTRATTTTGA
AAATTKTATTTAWT

Original motif     Consensus sequence: ACAAWTRATTTTGA Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT

Dataset #: 2
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 13
Similarity score: 0.596154

Alignment:
TTTDAWATATHATT-
-AWTAAATAYAATTT

Original motif     Consensus sequence: AATHATATWTHAAA Reverse complement motif     Consensus sequence: TTTDAWATATHATT

Dataset #: 5
Motif ID: 55
Motif name: TFM13
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 9
Number of overlap: 12
Similarity score: 1.11736

Alignment:
WAHHTVTTYKAAAAWTTRAT--
--------AWTAAATAYAATTT

Original motif     Consensus sequence: ATKAAWTTTTRMAABAHHTW Reverse complement motif     Consensus sequence: WAHHTVTTYKAAAAWTTRAT

Dataset #: 2
Motif ID: 15
Motif name: Motif 15
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 1.125

Alignment:
--TTTTATTGTYAT
AAATTKTATTTAWT

Original motif     Consensus sequence: ATMACAATAAAA Reverse complement motif     Consensus sequence: TTTTATTGTYAT

Dataset #: 2 Motif ID: 6 Motif name: Motif 6

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

Best Matches for Motif ID 6 (Highest to Lowest)

Dataset #: 5
Motif ID: 53
Motif name: TFM3
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 14
Similarity score: 0.0325081

Alignment:
WWHTTTTTCABAAWTTWA
-WWTAKTTCDKAATT---

Original motif     Consensus sequence: WWHTTTTTCABAAWTTWA Reverse complement motif     Consensus sequence: TWAAWTTVTGAAAAAHWW

Dataset #: 5
Motif ID: 55
Motif name: TFM13
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 14
Similarity score: 0.0349702

Alignment:
ATKAAWTTTTRMAABAHHTW
----AATTYDGAARTAWW--

Original motif     Consensus sequence: ATKAAWTTTTRMAABAHHTW Reverse complement motif     Consensus sequence: WAHHTVTTYKAAAAWTTRAT

Dataset #: 5
Motif ID: 56
Motif name: TFM11
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 9
Number of overlap: 14
Similarity score: 0.0626838

Alignment:
TWVHWWWYTTTYTTTTTHTTTVWBH
---WWTAKTTCDKAATT--------

Original motif     Consensus sequence: HDWVAAAHAAAAAMAAAMWWWHBWA Reverse complement motif     Consensus sequence: TWVHWWWYTTTYTTTTTHTTTVWBH

Dataset #: 5
Motif ID: 52
Motif name: TFM1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 14
Similarity score: 0.0667239

Alignment:
WTKTTTTTHWTTTTTTBT
-WWTAKTTCDKAATT---

Original motif     Consensus sequence: WTKTTTTTHWTTTTTTBT Reverse complement motif     Consensus sequence: ABAAAAAAWHAAAAARAW

Dataset #: 2
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0741071

Alignment:
AWTAAATAYAATTT
WWTAKTTCDKAATT

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

Dataset #: 2
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0763393

Alignment:
TGATTTTAWKATTT
WWTAKTTCDKAATT

Original motif     Consensus sequence: AAATRWTAAAATCA Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

Dataset #: 2
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0852679

Alignment:
TTTDAWATATHATT
WWTAKTTCDKAATT

Original motif     Consensus sequence: AATHATATWTHAAA Reverse complement motif     Consensus sequence: TTTDAWATATHATT

Dataset #: 2
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0864698

Alignment:
TWSTTTWAWTTTWT
WWTAKTTCDKAATT

Original motif     Consensus sequence: AWAAAWTWAAASWA Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

Dataset #: 2
Motif ID: 19
Motif name: Motif 19
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 12
Similarity score: 1.06667

Alignment:
--TTCWTAGATTAWA
AATTYDGAARTAWW-

Original motif     Consensus sequence: TTCWTAGATTAWA Reverse complement motif     Consensus sequence: TWTAATCTAWGAA

Dataset #: 4
Motif ID: 37
Motif name: tkAAATAATAtw
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 1.07587

Alignment:
WHTATTATTTDH--
WWTAKTTCDKAATT

Original motif     Consensus sequence: HDAAATAATAHW Reverse complement motif     Consensus sequence: WHTATTATTTDH

Dataset #: 2 Motif ID: 7 Motif name: Motif 7

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG

Best Matches for Motif ID 7 (Highest to Lowest)

Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0

Alignment:
HVGCCCCGCCCCBB
CSKCCCCGCCCCSY

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD

Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0012818

Alignment:
BCCGCCCCGCCCCBB
-CSKCCCCGCCCCSY

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB

Dataset #: 5
Motif ID: 54
Motif name: TFM12
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 14
Similarity score: 0.0537802

Alignment:
CYYCBBCYYYTCCHCCTYYY
---CSKCCCCGCCCCSY---

Original motif     Consensus sequence: CYYCBBCYYYTCCHCCTYYY Reverse complement motif     Consensus sequence: KKKAGGDGGAKKMGBBGKMG

Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 7
Number of overlap: 14
Similarity score: 0.0662825

Alignment:
DGVBCABTGDWGCGKRRCSR
------MSGGGGCGGGGYSG

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD

Dataset #: 5
Motif ID: 51
Motif name: TFM2
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0758609

Alignment:
CHCCBCCKMCTCCKCM
CSKCCCCGCCCCSY--

Original motif     Consensus sequence: RGRGGAGRRGGHGGDG Reverse complement motif     Consensus sequence: CHCCBCCKMCTCCKCM

Dataset #: 5
Motif ID: 50
Motif name: TFF11
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0829042

Alignment:
GCVCCGCCMCCYCC
CSKCCCCGCCCCSY

Original motif     Consensus sequence: GGMGGRGGCGGVGC Reverse complement motif     Consensus sequence: GCVCCGCCMCCYCC

Dataset #: 3
Motif ID: 22
Motif name: Zfx
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0912118

Alignment:
VAGGCCBBGGCVBB
CSKCCCCGCCCCSY

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB

Dataset #: 4
Motif ID: 42
Motif name: sSGTCACGTGACSs
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0948838

Alignment:
SGGTCACGTGACCS
MSGGGGCGGGGYSG

Original motif     Consensus sequence: SGGTCACGTGACCS Reverse complement motif     Consensus sequence: SGGTCACGTGACCS

Dataset #: 3
Motif ID: 30
Motif name: PLAG1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 13
Similarity score: 0.590412

Alignment:
CCCCCTTGGGCCCC-
-CSKCCCCGCCCCSY

Original motif     Consensus sequence: GGGGCCCAAGGGGG Reverse complement motif     Consensus sequence: CCCCCTTGGGCCCC

Dataset #: 5
Motif ID: 49
Motif name: TFF1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 1.07659

Alignment:
CGGVGCCGCVGC--
MSGGGGCGGGGYSG

Original motif     Consensus sequence: CGGVGCCGCVGC Reverse complement motif     Consensus sequence: GCVGCGGCBCCG

Dataset #: 2 Motif ID: 8 Motif name: Motif 8

Original motif     Consensus sequence: AAATRWTAAAATCA Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

Best Matches for Motif ID 8 (Highest to Lowest)

Dataset #: 2
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0961539

Alignment:
TWSTTTWAWTTTWT
TGATTTTAWKATTT

Original motif     Consensus sequence: AWAAAWTWAAASWA Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

Dataset #: 5
Motif ID: 52
Motif name: TFM1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 14
Similarity score: 0.10348

Alignment:
WTKTTTTTHWTTTTTTBT
-TGATTTTAWKATTT---

Original motif     Consensus sequence: WTKTTTTTHWTTTTTTBT Reverse complement motif     Consensus sequence: ABAAAAAAWHAAAAARAW

Dataset #: 2
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.107143

Alignment:
AAATTKTATTTAWT
TGATTTTAWKATTT

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

Dataset #: 5
Motif ID: 56
Motif name: TFM11
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 7
Number of overlap: 14
Similarity score: 0.111345

Alignment:
HDWVAAAHAAAAAMAAAMWWWHBWA
-----AAATRWTAAAATCA------

Original motif     Consensus sequence: HDWVAAAHAAAAAMAAAMWWWHBWA Reverse complement motif     Consensus sequence: TWVHWWWYTTTYTTTTTHTTTVWBH

Dataset #: 5
Motif ID: 55
Motif name: TFM13
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 14
Similarity score: 0.11369

Alignment:
WAHHTVTTYKAAAAWTTRAT
---TGATTTTAWKATTT---

Original motif     Consensus sequence: ATKAAWTTTTRMAABAHHTW Reverse complement motif     Consensus sequence: WAHHTVTTYKAAAAWTTRAT

Dataset #: 2
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.113839

Alignment:
WWTAKTTCDKAATT
TGATTTTAWKATTT

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

Dataset #: 2
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 13
Similarity score: 0.625

Alignment:
-AATHATATWTHAAA
AAATRWTAAAATCA-

Original motif     Consensus sequence: AATHATATWTHAAA Reverse complement motif     Consensus sequence: TTTDAWATATHATT

Dataset #: 2
Motif ID: 19
Motif name: Motif 19
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 12
Similarity score: 1.10417

Alignment:
TWTAATCTAWGAA--
-TGATTTTAWKATTT

Original motif     Consensus sequence: TTCWTAGATTAWA Reverse complement motif     Consensus sequence: TWTAATCTAWGAA

Dataset #: 2
Motif ID: 15
Motif name: Motif 15
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 1.10417

Alignment:
TTTTATTGTYAT--
TGATTTTAWKATTT

Original motif     Consensus sequence: ATMACAATAAAA Reverse complement motif     Consensus sequence: TTTTATTGTYAT

Dataset #: 2
Motif ID: 16
Motif name: Motif 16
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 12
Similarity score: 1.125

Alignment:
ACAAWTRATTTTGA--
--AAATRWTAAAATCA

Original motif     Consensus sequence: ACAAWTRATTTTGA Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT

Dataset #: 2 Motif ID: 9 Motif name: Motif 9

Original motif     Consensus sequence: AATHATATWTHAAA Reverse complement motif     Consensus sequence: TTTDAWATATHATT

Best Matches for Motif ID 9 (Highest to Lowest)

Dataset #: 5
Motif ID: 55
Motif name: TFM13
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0332341

Alignment:
WAHHTVTTYKAAAAWTTRAT
------TTTDAWATATHATT

Original motif     Consensus sequence: ATKAAWTTTTRMAABAHHTW Reverse complement motif     Consensus sequence: WAHHTVTTYKAAAAWTTRAT

Dataset #: 5
Motif ID: 53
Motif name: TFM3
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 14
Similarity score: 0.0486562

Alignment:
WWHTTTTTCABAAWTTWA
---TTTDAWATATHATT-

Original motif     Consensus sequence: WWHTTTTTCABAAWTTWA Reverse complement motif     Consensus sequence: TWAAWTTVTGAAAAAHWW

Dataset #: 5
Motif ID: 52
Motif name: TFM1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 14
Similarity score: 0.0528083

Alignment:
WTKTTTTTHWTTTTTTBT
---TTTDAWATATHATT-

Original motif     Consensus sequence: WTKTTTTTHWTTTTTTBT Reverse complement motif     Consensus sequence: ABAAAAAAWHAAAAARAW

Dataset #: 5
Motif ID: 56
Motif name: TFM11
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.054155

Alignment:
HDWVAAAHAAAAAMAAAMWWWHBWA
TTTDAWATATHATT-----------

Original motif     Consensus sequence: HDWVAAAHAAAAAMAAAMWWWHBWA Reverse complement motif     Consensus sequence: TWVHWWWYTTTYTTTTTHTTTVWBH

Dataset #: 2
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0675748

Alignment:
TWSTTTWAWTTTWT
AATHATATWTHAAA

Original motif     Consensus sequence: AWAAAWTWAAASWA Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

Dataset #: 2
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0741568

Alignment:
WWTAKTTCDKAATT
TTTDAWATATHATT

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

Dataset #: 2
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 13
Similarity score: 0.547543

Alignment:
-AAATTKTATTTAWT
AATHATATWTHAAA-

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

Dataset #: 2
Motif ID: 19
Motif name: Motif 19
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 13
Similarity score: 0.557158

Alignment:
-TTCWTAGATTAWA
AATHATATWTHAAA

Original motif     Consensus sequence: TTCWTAGATTAWA Reverse complement motif     Consensus sequence: TWTAATCTAWGAA

Dataset #: 2
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 13
Similarity score: 0.576389

Alignment:
-TGATTTTAWKATTT
TTTDAWATATHATT-

Original motif     Consensus sequence: AAATRWTAAAATCA Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

Dataset #: 4
Motif ID: 41
Motif name: wwAAATAATAtw
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 1.03318

Alignment:
--HDAAATAATADD
TTTDAWATATHATT

Original motif     Consensus sequence: HDAAATAATADD Reverse complement motif     Consensus sequence: DDTATTATTTDH

Dataset #: 2 Motif ID: 10 Motif name: Motif 10

Original motif     Consensus sequence: TTTCATAAWT Reverse complement motif     Consensus sequence: AWTTATGAAA

Best Matches for Motif ID 10 (Highest to Lowest)

Dataset #: 2
Motif ID: 11
Motif name: Motif 11
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.01875

Alignment:
ATTTWATGAAA
-AWTTATGAAA

Original motif     Consensus sequence: ATTTWATGAAA Reverse complement motif     Consensus sequence: TTTCATWAAAT

Dataset #: 2
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 10
Similarity score: 0.0375

Alignment:
AATTYDGAARTAWW
----AWTTATGAAA

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

Dataset #: 2
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 10
Similarity score: 0.04375

Alignment:
TGATTTTAWKATTT
-TTTCATAAWT---

Original motif     Consensus sequence: AAATRWTAAAATCA Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

Dataset #: 5
Motif ID: 53
Motif name: TFM3
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 6
Number of overlap: 10
Similarity score: 0.0448864

Alignment:
TWAAWTTVTGAAAAAHWW
---AWTTATGAAA-----

Original motif     Consensus sequence: WWHTTTTTCABAAWTTWA Reverse complement motif     Consensus sequence: TWAAWTTVTGAAAAAHWW

Dataset #: 5
Motif ID: 55
Motif name: TFM13
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 10
Similarity score: 0.0545833

Alignment:
ATKAAWTTTTRMAABAHHTW
----AWTTATGAAA------

Original motif     Consensus sequence: ATKAAWTTTTRMAABAHHTW Reverse complement motif     Consensus sequence: WAHHTVTTYKAAAAWTTRAT

Dataset #: 2
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.05625

Alignment:
AWTAAATAYAATTT
----AWTTATGAAA

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

Dataset #: 2
Motif ID: 17
Motif name: Motif 17
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.05625

Alignment:
ATTCATTTTT
TTTCATAAWT

Original motif     Consensus sequence: AAAAATGAAT Reverse complement motif     Consensus sequence: ATTCATTTTT

Dataset #: 2
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0604166

Alignment:
TTTDAWATATHATT
----TTTCATAAWT

Original motif     Consensus sequence: AATHATATWTHAAA Reverse complement motif     Consensus sequence: TTTDAWATATHATT

Dataset #: 2
Motif ID: 15
Motif name: Motif 15
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.06875

Alignment:
ATMACAATAAAA
--AWTTATGAAA

Original motif     Consensus sequence: ATMACAATAAAA Reverse complement motif     Consensus sequence: TTTTATTGTYAT

Dataset #: 2
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 10
Similarity score: 0.0706731

Alignment:
AWAAAWTWAAASWA
----AWTTATGAAA

Original motif     Consensus sequence: AWAAAWTWAAASWA Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

Dataset #: 2 Motif ID: 11 Motif name: Motif 11

Original motif     Consensus sequence: ATTTWATGAAA Reverse complement motif     Consensus sequence: TTTCATWAAAT

Best Matches for Motif ID 11 (Highest to Lowest)

Dataset #: 2
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 11
Similarity score: 0.0795455

Alignment:
AWTAAATAYAATTT
--TTTCATWAAAT-

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

Dataset #: 2
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 11
Similarity score: 0.0795455

Alignment:
AAATRWTAAAATCA
--TTTCATWAAAT-

Original motif     Consensus sequence: AAATRWTAAAATCA Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

Dataset #: 5
Motif ID: 53
Motif name: TFM3
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 6
Number of overlap: 11
Similarity score: 0.0991736

Alignment:
WWHTTTTTCABAAWTTWA
-----TTTCATWAAAT--

Original motif     Consensus sequence: WWHTTTTTCABAAWTTWA Reverse complement motif     Consensus sequence: TWAAWTTVTGAAAAAHWW

Dataset #: 2
Motif ID: 18
Motif name: Motif 18
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.102273

Alignment:
TTATWAWCTAA
ATTTWATGAAA

Original motif     Consensus sequence: TTAGWTWATAA Reverse complement motif     Consensus sequence: TTATWAWCTAA

Dataset #: 2
Motif ID: 15
Motif name: Motif 15
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.102273

Alignment:
TTTTATTGTYAT
ATTTWATGAAA-

Original motif     Consensus sequence: ATMACAATAAAA Reverse complement motif     Consensus sequence: TTTTATTGTYAT

Dataset #: 2
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.109848

Alignment:
AATHATATWTHAAA
---ATTTWATGAAA

Original motif     Consensus sequence: AATHATATWTHAAA Reverse complement motif     Consensus sequence: TTTDAWATATHATT

Dataset #: 2
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 11
Similarity score: 0.113636

Alignment:
AATTYDGAARTAWW
-ATTTWATGAAA--

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

Dataset #: 2
Motif ID: 19
Motif name: Motif 19
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.113636

Alignment:
TWTAATCTAWGAA
TTTCATWAAAT--

Original motif     Consensus sequence: TTCWTAGATTAWA Reverse complement motif     Consensus sequence: TWTAATCTAWGAA

Dataset #: 2
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.113636

Alignment:
TWSTTTWAWTTTWT
---TTTCATWAAAT

Original motif     Consensus sequence: AWAAAWTWAAASWA Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

Dataset #: 5
Motif ID: 55
Motif name: TFM13
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 11
Similarity score: 0.114394

Alignment:
ATKAAWTTTTRMAABAHHTW
---ATTTWATGAAA------

Original motif     Consensus sequence: ATKAAWTTTTRMAABAHHTW Reverse complement motif     Consensus sequence: WAHHTVTTYKAAAAWTTRAT

Dataset #: 2 Motif ID: 12 Motif name: Motif 12

Original motif     Consensus sequence: AAAACAAA Reverse complement motif     Consensus sequence: TTTGTTTT

Best Matches for Motif ID 12 (Highest to Lowest)

Dataset #: 2
Motif ID: 15
Motif name: Motif 15
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0625

Alignment:
TTTTATTGTYAT
-TTTGTTTT---

Original motif     Consensus sequence: ATMACAATAAAA Reverse complement motif     Consensus sequence: TTTTATTGTYAT

Dataset #: 2
Motif ID: 17
Motif name: Motif 17
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0625

Alignment:
AAAAATGAAT
-AAAACAAA-

Original motif     Consensus sequence: AAAAATGAAT Reverse complement motif     Consensus sequence: ATTCATTTTT

Dataset #: 2
Motif ID: 16
Motif name: Motif 16
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 5
Number of overlap: 8
Similarity score: 0.078125

Alignment:
TCAAAATKAWTTGT
--AAAACAAA----

Original motif     Consensus sequence: ACAAWTRATTTTGA Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT

Dataset #: 2
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.078125

Alignment:
AAATTKTATTTAWT
--TTTGTTTT----

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

Dataset #: 2
Motif ID: 14
Motif name: Motif 14
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.078125

Alignment:
AWAAATAA
AAAACAAA

Original motif     Consensus sequence: AWAAATAA Reverse complement motif     Consensus sequence: TTATTTWT

Dataset #: 5
Motif ID: 56
Motif name: TFM11
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 10
Number of overlap: 8
Similarity score: 0.0790441

Alignment:
HDWVAAAHAAAAAMAAAMWWWHBWA
---------AAAACAAA--------

Original motif     Consensus sequence: HDWVAAAHAAAAAMAAAMWWWHBWA Reverse complement motif     Consensus sequence: TWVHWWWYTTTYTTTTTHTTTVWBH

Dataset #: 2
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0805288

Alignment:
AWAAAWTWAAASWA
--AAAACAAA----

Original motif     Consensus sequence: AWAAAWTWAAASWA Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

Dataset #: 5
Motif ID: 52
Motif name: TFM1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 6
Number of overlap: 8
Similarity score: 0.0873397

Alignment:
ABAAAAAAWHAAAAARAW
-----AAAACAAA-----

Original motif     Consensus sequence: WTKTTTTTHWTTTTTTBT Reverse complement motif     Consensus sequence: ABAAAAAAWHAAAAARAW

Dataset #: 2
Motif ID: 18
Motif name: Motif 18
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.09375

Alignment:
TTAGWTWATAA
TTTGTTTT---

Original motif     Consensus sequence: TTAGWTWATAA Reverse complement motif     Consensus sequence: TTATWAWCTAA

Dataset #: 2
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.09375

Alignment:
AAATRWTAAAATCA
--AAAACAAA----

Original motif     Consensus sequence: AAATRWTAAAATCA Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

Dataset #: 2 Motif ID: 13 Motif name: Motif 13

Original motif     Consensus sequence: AAAGATTT Reverse complement motif     Consensus sequence: AAATCTTT

Best Matches for Motif ID 13 (Highest to Lowest)

Dataset #: 2
Motif ID: 20
Motif name: Motif 20
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0

Alignment:
AAATCTTTYAA
AAATCTTT---

Original motif     Consensus sequence: TTMAAAGATTT Reverse complement motif     Consensus sequence: AAATCTTTYAA

Dataset #: 2
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0625

Alignment:
AAATRWTAAAATCA
------AAATCTTT

Original motif     Consensus sequence: AAATRWTAAAATCA Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

Dataset #: 2
Motif ID: 16
Motif name: Motif 16
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0625

Alignment:
ACAAWTRATTTTGA
---AAAGATTT---

Original motif     Consensus sequence: ACAAWTRATTTTGA Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT

Dataset #: 2
Motif ID: 19
Motif name: Motif 19
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.078125

Alignment:
TTCWTAGATTAWA
---AAAGATTT--

Original motif     Consensus sequence: TTCWTAGATTAWA Reverse complement motif     Consensus sequence: TWTAATCTAWGAA

Dataset #: 2
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 7
Number of overlap: 8
Similarity score: 0.078125

Alignment:
AAATTKTATTTAWT
AAATCTTT------

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

Dataset #: 2
Motif ID: 4
Motif name: Motif 4
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0822369

Alignment:
AWGKAAWTTTT
---AAATCTTT

Original motif     Consensus sequence: AAAAWTTRCWT Reverse complement motif     Consensus sequence: AWGKAAWTTTT

Dataset #: 2
Motif ID: 17
Motif name: Motif 17
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.09375

Alignment:
AAAAATGAAT
--AAATCTTT

Original motif     Consensus sequence: AAAAATGAAT Reverse complement motif     Consensus sequence: ATTCATTTTT

Dataset #: 4
Motif ID: 44
Motif name: dhACATTCTkh
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.104167

Alignment:
DHACATTCTGH
AAAGATTT---

Original motif     Consensus sequence: DHACATTCTGH Reverse complement motif     Consensus sequence: HCAGAATGTHD

Dataset #: 2
Motif ID: 14
Motif name: Motif 14
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.109375

Alignment:
AWAAATAA
AAAGATTT

Original motif     Consensus sequence: AWAAATAA Reverse complement motif     Consensus sequence: TTATTTWT

Dataset #: 4
Motif ID: 37
Motif name: tkAAATAATAtw
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.110417

Alignment:
HDAAATAATAHW
--AAATCTTT--

Original motif     Consensus sequence: HDAAATAATAHW Reverse complement motif     Consensus sequence: WHTATTATTTDH

Dataset #: 2 Motif ID: 14 Motif name: Motif 14

Original motif     Consensus sequence: AWAAATAA Reverse complement motif     Consensus sequence: TTATTTWT

Best Matches for Motif ID 14 (Highest to Lowest)

Dataset #: 2
Motif ID: 17
Motif name: Motif 17
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.046875

Alignment:
ATTCATTTTT
--TTATTTWT

Original motif     Consensus sequence: AAAAATGAAT Reverse complement motif     Consensus sequence: ATTCATTTTT

Dataset #: 2
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.046875

Alignment:
AAATTKTATTTAWT
-----TTATTTWT-

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

Dataset #: 2
Motif ID: 15
Motif name: Motif 15
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0625

Alignment:
ATMACAATAAAA
--AWAAATAA--

Original motif     Consensus sequence: ATMACAATAAAA Reverse complement motif     Consensus sequence: TTTTATTGTYAT

Dataset #: 2
Motif ID: 16
Motif name: Motif 16
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0625

Alignment:
ACAAWTRATTTTGA
AWAAATAA------

Original motif     Consensus sequence: ACAAWTRATTTTGA Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT

Dataset #: 4
Motif ID: 41
Motif name: wwAAATAATAtw
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 8
Similarity score: 0.0636574

Alignment:
HDAAATAATADD
AWAAATAA----

Original motif     Consensus sequence: HDAAATAATADD Reverse complement motif     Consensus sequence: DDTATTATTTDH

Dataset #: 4
Motif ID: 37
Motif name: tkAAATAATAtw
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.0697917

Alignment:
WHTATTATTTDH
----TTATTTWT

Original motif     Consensus sequence: HDAAATAATAHW Reverse complement motif     Consensus sequence: WHTATTATTTDH

Dataset #: 5
Motif ID: 52
Motif name: TFM1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 8
Similarity score: 0.078125

Alignment:
WTKTTTTTHWTTTTTTBT
------TTATTTWT----

Original motif     Consensus sequence: WTKTTTTTHWTTTTTTBT Reverse complement motif     Consensus sequence: ABAAAAAAWHAAAAARAW

Dataset #: 2
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.078125

Alignment:
TGATTTTAWKATTT
-----TTATTTWT-

Original motif     Consensus sequence: AAATRWTAAAATCA Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

Dataset #: 2
Motif ID: 12
Motif name: Motif 12
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.078125

Alignment:
AAAACAAA
AWAAATAA

Original motif     Consensus sequence: AAAACAAA Reverse complement motif     Consensus sequence: TTTGTTTT

Dataset #: 2
Motif ID: 18
Motif name: Motif 18
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.078125

Alignment:
TTAGWTWATAA
---AWAAATAA

Original motif     Consensus sequence: TTAGWTWATAA Reverse complement motif     Consensus sequence: TTATWAWCTAA

Dataset #: 2 Motif ID: 15 Motif name: Motif 15

Original motif     Consensus sequence: ATMACAATAAAA Reverse complement motif     Consensus sequence: TTTTATTGTYAT

Best Matches for Motif ID 15 (Highest to Lowest)

Dataset #: 2
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 12
Similarity score: 0.104167

Alignment:
TGATTTTAWKATTT
TTTTATTGTYAT--

Original motif     Consensus sequence: AAATRWTAAAATCA Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

Dataset #: 5
Motif ID: 56
Motif name: TFM11
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 6
Number of overlap: 12
Similarity score: 0.109681

Alignment:
TWVHWWWYTTTYTTTTTHTTTVWBH
--------TTTTATTGTYAT-----

Original motif     Consensus sequence: HDWVAAAHAAAAAMAAAMWWWHBWA Reverse complement motif     Consensus sequence: TWVHWWWYTTTYTTTTTHTTTVWBH

Dataset #: 2
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 12
Similarity score: 0.114583

Alignment:
AWTAAATAYAATTT
-ATMACAATAAAA-

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

Dataset #: 2
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 12
Similarity score: 0.114583

Alignment:
AWAAAWTWAAASWA
ATMACAATAAAA--

Original motif     Consensus sequence: AWAAAWTWAAASWA Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

Dataset #: 5
Motif ID: 52
Motif name: TFM1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 12
Similarity score: 0.115652

Alignment:
ABAAAAAAWHAAAAARAW
--ATMACAATAAAA----

Original motif     Consensus sequence: WTKTTTTTHWTTTTTTBT Reverse complement motif     Consensus sequence: ABAAAAAAWHAAAAARAW

Dataset #: 2
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.119792

Alignment:
WWTAKTTCDKAATT
TTTTATTGTYAT--

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

Dataset #: 2
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 12
Similarity score: 0.121528

Alignment:
TTTDAWATATHATT
-TTTTATTGTYAT-

Original motif     Consensus sequence: AATHATATWTHAAA Reverse complement motif     Consensus sequence: TTTDAWATATHATT

Dataset #: 5
Motif ID: 53
Motif name: TFM3
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 7
Number of overlap: 12
Similarity score: 0.125

Alignment:
WWHTTTTTCABAAWTTWA
------ATMACAATAAAA

Original motif     Consensus sequence: WWHTTTTTCABAAWTTWA Reverse complement motif     Consensus sequence: TWAAWTTVTGAAAAAHWW

Dataset #: 2
Motif ID: 16
Motif name: Motif 16
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 11
Similarity score: 0.590909

Alignment:
-TCAAAATKAWTTGT
ATMACAATAAAA---

Original motif     Consensus sequence: ACAAWTRATTTTGA Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT

Dataset #: 2
Motif ID: 11
Motif name: Motif 11
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.602273

Alignment:
TTTCATWAAAT-
ATMACAATAAAA

Original motif     Consensus sequence: ATTTWATGAAA Reverse complement motif     Consensus sequence: TTTCATWAAAT

Dataset #: 2 Motif ID: 16 Motif name: Motif 16

Original motif     Consensus sequence: ACAAWTRATTTTGA Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT

Best Matches for Motif ID 16 (Highest to Lowest)

Dataset #: 2
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.1

Alignment:
AWTAAATAYAATTT
TCAAAATKAWTTGT

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

Dataset #: 5
Motif ID: 55
Motif name: TFM13
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 8
Number of overlap: 13
Similarity score: 0.599359

Alignment:
ATKAAWTTTTRMAABAHHTW-
-------TCAAAATKAWTTGT

Original motif     Consensus sequence: ATKAAWTTTTRMAABAHHTW Reverse complement motif     Consensus sequence: WAHHTVTTYKAAAAWTTRAT

Dataset #: 2
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 12
Similarity score: 1.08264

Alignment:
--AATHATATWTHAAA
ACAAWTRATTTTGA--

Original motif     Consensus sequence: AATHATATWTHAAA Reverse complement motif     Consensus sequence: TTTDAWATATHATT

Dataset #: 4
Motif ID: 37
Motif name: tkAAATAATAtw
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 1.08403

Alignment:
--WHTATTATTTDH
TCAAAATKAWTTGT

Original motif     Consensus sequence: HDAAATAATAHW Reverse complement motif     Consensus sequence: WHTATTATTTDH

Dataset #: 4
Motif ID: 41
Motif name: wwAAATAATAtw
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 1.08881

Alignment:
--DDTATTATTTDH
TCAAAATKAWTTGT

Original motif     Consensus sequence: HDAAATAATADD Reverse complement motif     Consensus sequence: DDTATTATTTDH

Dataset #: 2
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 12
Similarity score: 1.1

Alignment:
--AAATRWTAAAATCA
ACAAWTRATTTTGA--

Original motif     Consensus sequence: AAATRWTAAAATCA Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

Dataset #: 2
Motif ID: 15
Motif name: Motif 15
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 1.56591

Alignment:
TTTTATTGTYAT---
-ACAAWTRATTTTGA

Original motif     Consensus sequence: ATMACAATAAAA Reverse complement motif     Consensus sequence: TTTTATTGTYAT

Dataset #: 2
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 11
Similarity score: 1.56875

Alignment:
---AATTYDGAARTAWW
TCAAAATKAWTTGT---

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

Dataset #: 2
Motif ID: 4
Motif name: Motif 4
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 1.57667

Alignment:
AAAAWTTRCWT---
ACAAWTRATTTTGA

Original motif     Consensus sequence: AAAAWTTRCWT Reverse complement motif     Consensus sequence: AWGKAAWTTTT

Dataset #: 2
Motif ID: 20
Motif name: Motif 20
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 1.57727

Alignment:
TTMAAAGATTT---
ACAAWTRATTTTGA

Original motif     Consensus sequence: TTMAAAGATTT Reverse complement motif     Consensus sequence: AAATCTTTYAA

Dataset #: 2 Motif ID: 17 Motif name: Motif 17

Original motif     Consensus sequence: AAAAATGAAT Reverse complement motif     Consensus sequence: ATTCATTTTT

Best Matches for Motif ID 17 (Highest to Lowest)

Dataset #: 2
Motif ID: 16
Motif name: Motif 16
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.05

Alignment:
ACAAWTRATTTTGA
-ATTCATTTTT---

Original motif     Consensus sequence: ACAAWTRATTTTGA Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT

Dataset #: 2
Motif ID: 15
Motif name: Motif 15
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 10
Similarity score: 0.0875

Alignment:
TTTTATTGTYAT
ATTCATTTTT--

Original motif     Consensus sequence: ATMACAATAAAA Reverse complement motif     Consensus sequence: TTTTATTGTYAT

Dataset #: 2
Motif ID: 10
Motif name: Motif 10
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0875

Alignment:
AWTTATGAAA
AAAAATGAAT

Original motif     Consensus sequence: TTTCATAAWT Reverse complement motif     Consensus sequence: AWTTATGAAA

Dataset #: 2
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 10
Similarity score: 0.0875

Alignment:
AWTAAATAYAATTT
---AAAAATGAAT-

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

Dataset #: 2
Motif ID: 4
Motif name: Motif 4
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0947369

Alignment:
AWGKAAWTTTT
-ATTCATTTTT

Original motif     Consensus sequence: AAAAWTTRCWT Reverse complement motif     Consensus sequence: AWGKAAWTTTT

Dataset #: 2
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.1

Alignment:
AAATRWTAAAATCA
-AAAAATGAAT---

Original motif     Consensus sequence: AAATRWTAAAATCA Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

Dataset #: 4
Motif ID: 44
Motif name: dhACATTCTkh
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.1

Alignment:
DHACATTCTGH
ATTCATTTTT-

Original motif     Consensus sequence: DHACATTCTGH Reverse complement motif     Consensus sequence: HCAGAATGTHD

Dataset #: 5
Motif ID: 55
Motif name: TFM13
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 11
Number of overlap: 10
Similarity score: 0.103333

Alignment:
ATKAAWTTTTRMAABAHHTW
ATTCATTTTT----------

Original motif     Consensus sequence: ATKAAWTTTTRMAABAHHTW Reverse complement motif     Consensus sequence: WAHHTVTTYKAAAAWTTRAT

Dataset #: 2
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.104808

Alignment:
TWSTTTWAWTTTWT
----ATTCATTTTT

Original motif     Consensus sequence: AWAAAWTWAAASWA Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

Dataset #: 5
Motif ID: 52
Motif name: TFM1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 5
Number of overlap: 10
Similarity score: 0.105128

Alignment:
ABAAAAAAWHAAAAARAW
----AAAAATGAAT----

Original motif     Consensus sequence: WTKTTTTTHWTTTTTTBT Reverse complement motif     Consensus sequence: ABAAAAAAWHAAAAARAW

Dataset #: 2 Motif ID: 18 Motif name: Motif 18

Original motif     Consensus sequence: TTAGWTWATAA Reverse complement motif     Consensus sequence: TTATWAWCTAA

Best Matches for Motif ID 18 (Highest to Lowest)

Dataset #: 2
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 11
Similarity score: 0.09375

Alignment:
AATTYDGAARTAWW
-TTATWAWCTAA--

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

Dataset #: 2
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 11
Similarity score: 0.102273

Alignment:
TGATTTTAWKATTT
---TTAGWTWATAA

Original motif     Consensus sequence: AAATRWTAAAATCA Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

Dataset #: 2
Motif ID: 11
Motif name: Motif 11
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.102273

Alignment:
TTTCATWAAAT
TTAGWTWATAA

Original motif     Consensus sequence: ATTTWATGAAA Reverse complement motif     Consensus sequence: TTTCATWAAAT

Dataset #: 4
Motif ID: 37
Motif name: tkAAATAATAtw
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.102273

Alignment:
WHTATTATTTDH
-TTATWAWCTAA

Original motif     Consensus sequence: HDAAATAATAHW Reverse complement motif     Consensus sequence: WHTATTATTTDH

Dataset #: 4
Motif ID: 41
Motif name: wwAAATAATAtw
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.104798

Alignment:
DDTATTATTTDH
-TTATWAWCTAA

Original motif     Consensus sequence: HDAAATAATADD Reverse complement motif     Consensus sequence: DDTATTATTTDH

Dataset #: 5
Motif ID: 53
Motif name: TFM3
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 8
Number of overlap: 11
Similarity score: 0.108471

Alignment:
WWHTTTTTCABAAWTTWA
-------TTATWAWCTAA

Original motif     Consensus sequence: WWHTTTTTCABAAWTTWA Reverse complement motif     Consensus sequence: TWAAWTTVTGAAAAAHWW

Dataset #: 2
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 11
Similarity score: 0.109848

Alignment:
TTTDAWATATHATT
-TTAGWTWATAA--

Original motif     Consensus sequence: AATHATATWTHAAA Reverse complement motif     Consensus sequence: TTTDAWATATHATT

Dataset #: 5
Motif ID: 55
Motif name: TFM13
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 11
Similarity score: 0.109848

Alignment:
ATKAAWTTTTRMAABAHHTW
------TTATWAWCTAA---

Original motif     Consensus sequence: ATKAAWTTTTRMAABAHHTW Reverse complement motif     Consensus sequence: WAHHTVTTYKAAAAWTTRAT

Dataset #: 2
Motif ID: 15
Motif name: Motif 15
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.113636

Alignment:
ATMACAATAAAA
-TTAGWTWATAA

Original motif     Consensus sequence: ATMACAATAAAA Reverse complement motif     Consensus sequence: TTTTATTGTYAT

Dataset #: 2
Motif ID: 19
Motif name: Motif 19
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 11
Similarity score: 0.113636

Alignment:
TTCWTAGATTAWA
TTATWAWCTAA--

Original motif     Consensus sequence: TTCWTAGATTAWA Reverse complement motif     Consensus sequence: TWTAATCTAWGAA

Dataset #: 2 Motif ID: 19 Motif name: Motif 19

Original motif     Consensus sequence: TTCWTAGATTAWA Reverse complement motif     Consensus sequence: TWTAATCTAWGAA

Best Matches for Motif ID 19 (Highest to Lowest)

Dataset #: 2
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 13
Similarity score: 0.0641025

Alignment:
AATHATATWTHAAA
-TTCWTAGATTAWA

Original motif     Consensus sequence: AATHATATWTHAAA Reverse complement motif     Consensus sequence: TTTDAWATATHATT

Dataset #: 5
Motif ID: 55
Motif name: TFM13
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 7
Number of overlap: 13
Similarity score: 0.0762821

Alignment:
WAHHTVTTYKAAAAWTTRAT
------TTCWTAGATTAWA-

Original motif     Consensus sequence: ATKAAWTTTTRMAABAHHTW Reverse complement motif     Consensus sequence: WAHHTVTTYKAAAAWTTRAT

Dataset #: 5
Motif ID: 56
Motif name: TFM11
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 12
Number of overlap: 13
Similarity score: 0.0810709

Alignment:
HDWVAAAHAAAAAMAAAMWWWHBWA
-TWTAATCTAWGAA-----------

Original motif     Consensus sequence: HDWVAAAHAAAAAMAAAMWWWHBWA Reverse complement motif     Consensus sequence: TWVHWWWYTTTYTTTTTHTTTVWBH

Dataset #: 5
Motif ID: 53
Motif name: TFM3
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 13
Similarity score: 0.0815851

Alignment:
TWAAWTTVTGAAAAAHWW
-----TTCWTAGATTAWA

Original motif     Consensus sequence: WWHTTTTTCABAAWTTWA Reverse complement motif     Consensus sequence: TWAAWTTVTGAAAAAHWW

Dataset #: 2
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 12
Similarity score: 0.5625

Alignment:
AATTYDGAARTAWW-
--TTCWTAGATTAWA

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

Dataset #: 2
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 12
Similarity score: 0.5625

Alignment:
-TGATTTTAWKATTT
TWTAATCTAWGAA--

Original motif     Consensus sequence: AAATRWTAAAATCA Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

Dataset #: 4
Motif ID: 37
Motif name: tkAAATAATAtw
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.577083

Alignment:
WHTATTATTTDH-
TWTAATCTAWGAA

Original motif     Consensus sequence: HDAAATAATAHW Reverse complement motif     Consensus sequence: WHTATTATTTDH

Dataset #: 4
Motif ID: 41
Motif name: wwAAATAATAtw
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.58179

Alignment:
DDTATTATTTDH-
TWTAATCTAWGAA

Original motif     Consensus sequence: HDAAATAATADD Reverse complement motif     Consensus sequence: DDTATTATTTDH

Dataset #: 2
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 12
Similarity score: 0.583333

Alignment:
AWTAAATAYAATTT-
--TTCWTAGATTAWA

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

Dataset #: 2
Motif ID: 20
Motif name: Motif 20
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 1.02652

Alignment:
TTMAAAGATTT--
TTCWTAGATTAWA

Original motif     Consensus sequence: TTMAAAGATTT Reverse complement motif     Consensus sequence: AAATCTTTYAA

Dataset #: 2 Motif ID: 20 Motif name: Motif 20

Original motif     Consensus sequence: TTMAAAGATTT Reverse complement motif     Consensus sequence: AAATCTTTYAA

Best Matches for Motif ID 20 (Highest to Lowest)

Dataset #: 2
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 11
Similarity score: 0.0681818

Alignment:
AAATRWTAAAATCA
---AAATCTTTYAA

Original motif     Consensus sequence: AAATRWTAAAATCA Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

Dataset #: 2
Motif ID: 19
Motif name: Motif 19
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0681818

Alignment:
TTCWTAGATTAWA
TTMAAAGATTT--

Original motif     Consensus sequence: TTCWTAGATTAWA Reverse complement motif     Consensus sequence: TWTAATCTAWGAA

Dataset #: 2
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 11
Similarity score: 0.102273

Alignment:
AAATTKTATTTAWT
-AAATCTTTYAA--

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

Dataset #: 2
Motif ID: 16
Motif name: Motif 16
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.102273

Alignment:
ACAAWTRATTTTGA
TTMAAAGATTT---

Original motif     Consensus sequence: ACAAWTRATTTTGA Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT

Dataset #: 2
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.106061

Alignment:
TTTDAWATATHATT
--TTMAAAGATTT-

Original motif     Consensus sequence: AATHATATWTHAAA Reverse complement motif     Consensus sequence: TTTDAWATATHATT

Dataset #: 5
Motif ID: 55
Motif name: TFM13
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.110606

Alignment:
WAHHTVTTYKAAAAWTTRAT
-AAATCTTTYAA--------

Original motif     Consensus sequence: ATKAAWTTTTRMAABAHHTW Reverse complement motif     Consensus sequence: WAHHTVTTYKAAAAWTTRAT

Dataset #: 2
Motif ID: 4
Motif name: Motif 4
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.110646

Alignment:
AWGKAAWTTTT
TTMAAAGATTT

Original motif     Consensus sequence: AAAAWTTRCWT Reverse complement motif     Consensus sequence: AWGKAAWTTTT

Dataset #: 5
Motif ID: 53
Motif name: TFM3
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 7
Number of overlap: 11
Similarity score: 0.113636

Alignment:
WWHTTTTTCABAAWTTWA
------TTMAAAGATTT-

Original motif     Consensus sequence: WWHTTTTTCABAAWTTWA Reverse complement motif     Consensus sequence: TWAAWTTVTGAAAAAHWW

Dataset #: 4
Motif ID: 37
Motif name: tkAAATAATAtw
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.124242

Alignment:
WHTATTATTTDH
-AAATCTTTYAA

Original motif     Consensus sequence: HDAAATAATAHW Reverse complement motif     Consensus sequence: WHTATTATTTDH

Dataset #: 2
Motif ID: 15
Motif name: Motif 15
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.125

Alignment:
ATMACAATAAAA
-AAATCTTTYAA

Original motif     Consensus sequence: ATMACAATAAAA Reverse complement motif     Consensus sequence: TTTTATTGTYAT

Dataset #: 2 Motif ID: 21 Motif name: Motif 21

Original motif     Consensus sequence: ATAAAA Reverse complement motif     Consensus sequence: TTTTAT

Best Matches for Motif ID 21 (Highest to Lowest)

Dataset #: 2
Motif ID: 15
Motif name: Motif 15
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0

Alignment:
TTTTATTGTYAT
TTTTAT------

Original motif     Consensus sequence: ATMACAATAAAA Reverse complement motif     Consensus sequence: TTTTATTGTYAT

Dataset #: 2
Motif ID: 11
Motif name: Motif 11
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 5
Number of overlap: 6
Similarity score: 0.0208333

Alignment:
TTTCATWAAAT
-ATAAAA----

Original motif     Consensus sequence: ATTTWATGAAA Reverse complement motif     Consensus sequence: TTTCATWAAAT

Dataset #: 2
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 6
Number of overlap: 6
Similarity score: 0.0208333

Alignment:
AAATRWTAAAATCA
-----ATAAAA---

Original motif     Consensus sequence: AAATRWTAAAATCA Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

Dataset #: 2
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 6
Number of overlap: 6
Similarity score: 0.0208333

Alignment:
AAATTKTATTTAWT
---TTTTAT-----

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

Dataset #: 2
Motif ID: 10
Motif name: Motif 10
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.0416667

Alignment:
TTTCATAAWT
----TTTTAT

Original motif     Consensus sequence: TTTCATAAWT Reverse complement motif     Consensus sequence: AWTTATGAAA

Dataset #: 2
Motif ID: 14
Motif name: Motif 14
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0.0625

Alignment:
AWAAATAA
ATAAAA--

Original motif     Consensus sequence: AWAAATAA Reverse complement motif     Consensus sequence: TTATTTWT

Dataset #: 2
Motif ID: 19
Motif name: Motif 19
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 8
Number of overlap: 6
Similarity score: 0.0625

Alignment:
TWTAATCTAWGAA
TTTTAT-------

Original motif     Consensus sequence: TTCWTAGATTAWA Reverse complement motif     Consensus sequence: TWTAATCTAWGAA

Dataset #: 2
Motif ID: 20
Motif name: Motif 20
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 6
Number of overlap: 6
Similarity score: 0.0625

Alignment:
TTMAAAGATTT
ATAAAA-----

Original motif     Consensus sequence: TTMAAAGATTT Reverse complement motif     Consensus sequence: AAATCTTTYAA

Dataset #: 4
Motif ID: 41
Motif name: wwAAATAATAtw
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 6
Similarity score: 0.0632716

Alignment:
DDTATTATTTDH
--TTTTAT----

Original motif     Consensus sequence: HDAAATAATADD Reverse complement motif     Consensus sequence: DDTATTATTTDH

Dataset #: 2
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 6
Similarity score: 0.0689103

Alignment:
TWSTTTWAWTTTWT
---TTTTAT-----

Original motif     Consensus sequence: AWAAAWTWAAASWA Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

Dataset #: 3 Motif ID: 22 Motif name: Zfx

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB

Best Matches for Motif ID 22 (Highest to Lowest)

Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 14
Similarity score: 0.0514008

Alignment:
BCCGCCCCGCCCCBB
BBVGCCBVGGCCTV-

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB

Dataset #: 5
Motif ID: 51
Motif name: TFM2
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 14
Similarity score: 0.0590031

Alignment:
CHCCBCCKMCTCCKCM
-BBVGCCBVGGCCTV-

Original motif     Consensus sequence: RGRGGAGRRGGHGGDG Reverse complement motif     Consensus sequence: CHCCBCCKMCTCCKCM

Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 14
Similarity score: 0.0611182

Alignment:
DGVBCABTGDWGCGKRRCSR
--BBVGCCBVGGCCTV----

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD

Dataset #: 5
Motif ID: 54
Motif name: TFM12
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 6
Number of overlap: 14
Similarity score: 0.0629383

Alignment:
KKKAGGDGGAKKMGBBGKMG
-----VAGGCCBBGGCVBB-

Original motif     Consensus sequence: CYYCBBCYYYTCCHCCTYYY Reverse complement motif     Consensus sequence: KKKAGGDGGAKKMGBBGKMG

Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0654514

Alignment:
HVGCCCCGCCCCBB
VAGGCCBBGGCVBB

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD

Dataset #: 3
Motif ID: 30
Motif name: PLAG1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0796879

Alignment:
CCCCCTTGGGCCCC
BBVGCCBVGGCCTV

Original motif     Consensus sequence: GGGGCCCAAGGGGG Reverse complement motif     Consensus sequence: CCCCCTTGGGCCCC

Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0799116

Alignment:
MSGGGGCGGGGYSG
BBVGCCBVGGCCTV

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG

Dataset #: 5
Motif ID: 50
Motif name: TFF11
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 13
Similarity score: 0.583338

Alignment:
-GCVCCGCCMCCYCC
BBVGCCBVGGCCTV-

Original motif     Consensus sequence: GGMGGRGGCGGVGC Reverse complement motif     Consensus sequence: GCVCCGCCMCCYCC

Dataset #: 5
Motif ID: 49
Motif name: TFF1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 1.55068

Alignment:
CGGVGCCGCVGC---
-BBVGCCBVGGCCTV

Original motif     Consensus sequence: CGGVGCCGCVGC Reverse complement motif     Consensus sequence: GCVGCGGCBCCG

Dataset #: 3
Motif ID: 35
Motif name: GABPA
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 1.57592

Alignment:
CCGGAAGTGVV---
VAGGCCBBGGCVBB

Original motif     Consensus sequence: CCGGAAGTGVV Reverse complement motif     Consensus sequence: VVCACTTCCGG

Dataset #: 3 Motif ID: 23 Motif name: Egr1

Original motif     Consensus sequence: HGCGTGGGCGK Reverse complement motif     Consensus sequence: YCGCCCACGCH

Best Matches for Motif ID 23 (Highest to Lowest)

Dataset #: 5
Motif ID: 50
Motif name: TFF11
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 11
Similarity score: 0.0514701

Alignment:
GCVCCGCCMCCYCC
---YCGCCCACGCH

Original motif     Consensus sequence: GGMGGRGGCGGVGC Reverse complement motif     Consensus sequence: GCVCCGCCMCCYCC

Dataset #: 5
Motif ID: 51
Motif name: TFM2
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 6
Number of overlap: 11
Similarity score: 0.0698683

Alignment:
CHCCBCCKMCTCCKCM
-----YCGCCCACGCH

Original motif     Consensus sequence: RGRGGAGRRGGHGGDG Reverse complement motif     Consensus sequence: CHCCBCCKMCTCCKCM

Dataset #: 5
Motif ID: 54
Motif name: TFM12
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 9
Number of overlap: 11
Similarity score: 0.0718056

Alignment:
KKKAGGDGGAKKMGBBGKMG
-HGCGTGGGCGK--------

Original motif     Consensus sequence: CYYCBBCYYYTCCHCCTYYY Reverse complement motif     Consensus sequence: KKKAGGDGGAKKMGBBGKMG

Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 11
Similarity score: 0.0730967

Alignment:
BBGGGGCGGGGCGGB
----HGCGTGGGCGK

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB

Dataset #: 3
Motif ID: 22
Motif name: Zfx
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.0764878

Alignment:
BBVGCCBVGGCCTV
--HGCGTGGGCGK-

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB

Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 6
Number of overlap: 11
Similarity score: 0.0765783

Alignment:
DGVBCABTGDWGCGKRRCSR
----HGCGTGGGCGK-----

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD

Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 11
Similarity score: 0.0771215

Alignment:
CSKCCCCGCCCCSY
-YCGCCCACGCH--

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG

Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.0825032

Alignment:
HVGCCCCGCCCCBB
-YCGCCCACGCH--

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD

Dataset #: 5
Motif ID: 48
Motif name: TFW3
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.550222

Alignment:
CGCGBMGCCG-
HGCGTGGGCGK

Original motif     Consensus sequence: CGGCYBCGCG Reverse complement motif     Consensus sequence: CGCGBMGCCG

Dataset #: 3
Motif ID: 24
Motif name: SP1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.572401

Alignment:
GGGGGYGGGG-
HGCGTGGGCGK

Original motif     Consensus sequence: CCCCKCCCCC Reverse complement motif     Consensus sequence: GGGGGYGGGG

Dataset #: 3 Motif ID: 24 Motif name: SP1

Original motif     Consensus sequence: CCCCKCCCCC Reverse complement motif     Consensus sequence: GGGGGYGGGG

Best Matches for Motif ID 24 (Highest to Lowest)

Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 10
Similarity score: 0.00451594

Alignment:
MSGGGGCGGGGYSG
-GGGGGYGGGG---

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG

Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 10
Similarity score: 0.00965796

Alignment:
HVGCCCCGCCCCBB
---CCCCKCCCCC-

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD

Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.0127292

Alignment:
BCCGCCCCGCCCCBB
----CCCCKCCCCC-

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB

Dataset #: 5
Motif ID: 50
Motif name: TFF11
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 10
Similarity score: 0.0174405

Alignment:
GGMGGRGGCGGVGC
---GGGGGYGGGG-

Original motif     Consensus sequence: GGMGGRGGCGGVGC Reverse complement motif     Consensus sequence: GCVCCGCCMCCYCC

Dataset #: 5
Motif ID: 54
Motif name: TFM12
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 7
Number of overlap: 10
Similarity score: 0.0301548

Alignment:
CYYCBBCYYYTCCHCCTYYY
------CCCCKCCCCC----

Original motif     Consensus sequence: CYYCBBCYYYTCCHCCTYYY Reverse complement motif     Consensus sequence: KKKAGGDGGAKKMGBBGKMG

Dataset #: 5
Motif ID: 51
Motif name: TFM2
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0329167

Alignment:
RGRGGAGRRGGHGGDG
------GGGGGYGGGG

Original motif     Consensus sequence: RGRGGAGRRGGHGGDG Reverse complement motif     Consensus sequence: CHCCBCCKMCTCCKCM

Dataset #: 3
Motif ID: 22
Motif name: Zfx
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 10
Similarity score: 0.0540825

Alignment:
BBVGCCBVGGCCTV
----GGGGGYGGGG

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB

Dataset #: 5
Motif ID: 49
Motif name: TFF1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.0557738

Alignment:
GCVGCGGCBCCG
-CCCCKCCCCC-

Original motif     Consensus sequence: CGGVGCCGCVGC Reverse complement motif     Consensus sequence: GCVGCGGCBCCG

Dataset #: 3
Motif ID: 30
Motif name: PLAG1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 10
Similarity score: 0.0600992

Alignment:
CCCCCTTGGGCCCC
-CCCCKCCCCC---

Original motif     Consensus sequence: GGGGCCCAAGGGGG Reverse complement motif     Consensus sequence: CCCCCTTGGGCCCC

Dataset #: 3
Motif ID: 27
Motif name: Klf4
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0637183

Alignment:
GCCYCMCCCD
CCCCKCCCCC

Original motif     Consensus sequence: DGGGYGKGGC Reverse complement motif     Consensus sequence: GCCYCMCCCD

Dataset #: 3 Motif ID: 25 Motif name: TFAP2A

Original motif     Consensus sequence: GCCBBVRGS Reverse complement motif     Consensus sequence: SCMVBBGGC

Best Matches for Motif ID 25 (Highest to Lowest)

Dataset #: 3
Motif ID: 22
Motif name: Zfx
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 9
Similarity score: 0.0131247

Alignment:
BBVGCCBVGGCCTV
---SCMVBBGGC--

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB

Dataset #: 3
Motif ID: 30
Motif name: PLAG1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 9
Similarity score: 0.0414588

Alignment:
GGGGCCCAAGGGGG
---GCCBBVRGS--

Original motif     Consensus sequence: GGGGCCCAAGGGGG Reverse complement motif     Consensus sequence: CCCCCTTGGGCCCC

Dataset #: 5
Motif ID: 50
Motif name: TFF11
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 9
Similarity score: 0.0415732

Alignment:
GGMGGRGGCGGVGC
SCMVBBGGC-----

Original motif     Consensus sequence: GGMGGRGGCGGVGC Reverse complement motif     Consensus sequence: GCVCCGCCMCCYCC

Dataset #: 3
Motif ID: 33
Motif name: Mycn
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 9
Similarity score: 0.0550803

Alignment:
HSCACGTGGC
-SCMVBBGGC

Original motif     Consensus sequence: HSCACGTGGC Reverse complement motif     Consensus sequence: GCCACGTGSD

Dataset #: 5
Motif ID: 48
Motif name: TFW3
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 9
Similarity score: 0.0552877

Alignment:
CGGCYBCGCG
-GCCBBVRGS

Original motif     Consensus sequence: CGGCYBCGCG Reverse complement motif     Consensus sequence: CGCGBMGCCG

Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 8
Number of overlap: 9
Similarity score: 0.0581255

Alignment:
MSGKKRCGCWDCABTGBBCD
-------GCCBBVRGS----

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD

Dataset #: 3
Motif ID: 34
Motif name: Myc
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 9
Similarity score: 0.0613455

Alignment:
VGCACGTGGH
-SCMVBBGGC

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV

Dataset #: 5
Motif ID: 54
Motif name: TFM12
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 11
Number of overlap: 9
Similarity score: 0.0630429

Alignment:
KKKAGGDGGAKKMGBBGKMG
-SCMVBBGGC----------

Original motif     Consensus sequence: CYYCBBCYYYTCCHCCTYYY Reverse complement motif     Consensus sequence: KKKAGGDGGAKKMGBBGKMG

Dataset #: 5
Motif ID: 49
Motif name: TFF1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 9
Similarity score: 0.0669772

Alignment:
GCVGCGGCBCCG
SCMVBBGGC---

Original motif     Consensus sequence: CGGVGCCGCVGC Reverse complement motif     Consensus sequence: GCVGCGGCBCCG

Dataset #: 5
Motif ID: 51
Motif name: TFM2
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 9
Similarity score: 0.069755

Alignment:
CHCCBCCKMCTCCKCM
SCMVBBGGC-------

Original motif     Consensus sequence: RGRGGAGRRGGHGGDG Reverse complement motif     Consensus sequence: CHCCBCCKMCTCCKCM

Dataset #: 3 Motif ID: 26 Motif name: MIZF

Original motif     Consensus sequence: BAACGTCCGC Reverse complement motif     Consensus sequence: GCGGACGTTV

Best Matches for Motif ID 26 (Highest to Lowest)

Dataset #: 3
Motif ID: 35
Motif name: GABPA
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.0459305

Alignment:
CCGGAAGTGVV
GCGGACGTTV-

Original motif     Consensus sequence: CCGGAAGTGVV Reverse complement motif     Consensus sequence: VVCACTTCCGG

Dataset #: 4
Motif ID: 40
Motif name: kcACCTGCAgc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0778314

Alignment:
BCACCTGCABC
BAACGTCCGC-

Original motif     Consensus sequence: BCACCTGCABC Reverse complement motif     Consensus sequence: GBTGCAGGTGB

Dataset #: 4
Motif ID: 44
Motif name: dhACATTCTkh
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0794339

Alignment:
DHACATTCTGH
BAACGTCCGC-

Original motif     Consensus sequence: DHACATTCTGH Reverse complement motif     Consensus sequence: HCAGAATGTHD

Dataset #: 4
Motif ID: 42
Motif name: sSGTCACGTGACSs
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.0804061

Alignment:
SGGTCACGTGACCS
---BAACGTCCGC-

Original motif     Consensus sequence: SGGTCACGTGACCS Reverse complement motif     Consensus sequence: SGGTCACGTGACCS

Dataset #: 5
Motif ID: 50
Motif name: TFF11
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 10
Similarity score: 0.0861006

Alignment:
GCVCCGCCMCCYCC
-BAACGTCCGC---

Original motif     Consensus sequence: GGMGGRGGCGGVGC Reverse complement motif     Consensus sequence: GCVCCGCCMCCYCC

Dataset #: 5
Motif ID: 54
Motif name: TFM12
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 6
Number of overlap: 10
Similarity score: 0.0871006

Alignment:
CYYCBBCYYYTCCHCCTYYY
-----BAACGTCCGC-----

Original motif     Consensus sequence: CYYCBBCYYYTCCHCCTYYY Reverse complement motif     Consensus sequence: KKKAGGDGGAKKMGBBGKMG

Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0877229

Alignment:
BCCGCCCCGCCCCBB
BAACGTCCGC-----

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB

Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 10
Number of overlap: 10
Similarity score: 0.0877672

Alignment:
MSGKKRCGCWDCABTGBBCD
-GCGGACGTTV---------

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD

Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 10
Similarity score: 0.0884513

Alignment:
HVGCCCCGCCCCBB
---BAACGTCCGC-

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD

Dataset #: 4
Motif ID: 45
Motif name: wbgTAAATAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.0893149

Alignment:
DBGTAAATAHD
GCGGACGTTV-

Original motif     Consensus sequence: DBGTAAATAHD Reverse complement motif     Consensus sequence: DHTATTTACBD

Dataset #: 3 Motif ID: 27 Motif name: Klf4

Original motif     Consensus sequence: DGGGYGKGGC Reverse complement motif     Consensus sequence: GCCYCMCCCD

Best Matches for Motif ID 27 (Highest to Lowest)

Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 10
Similarity score: 0.0152457

Alignment:
CSKCCCCGCCCCSY
--GCCYCMCCCD--

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG

Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 10
Similarity score: 0.0160185

Alignment:
BBGGGGCGGGGCVD
--DGGGYGKGGC--

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD

Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 10
Similarity score: 0.0194893

Alignment:
BBGGGGCGGGGCGGB
--DGGGYGKGGC---

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB

Dataset #: 5
Motif ID: 50
Motif name: TFF11
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 10
Similarity score: 0.0402906

Alignment:
GGMGGRGGCGGVGC
----DGGGYGKGGC

Original motif     Consensus sequence: GGMGGRGGCGGVGC Reverse complement motif     Consensus sequence: GCVCCGCCMCCYCC

Dataset #: 5
Motif ID: 54
Motif name: TFM12
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 7
Number of overlap: 10
Similarity score: 0.0556427

Alignment:
CYYCBBCYYYTCCHCCTYYY
----GCCYCMCCCD------

Original motif     Consensus sequence: CYYCBBCYYYTCCHCCTYYY Reverse complement motif     Consensus sequence: KKKAGGDGGAKKMGBBGKMG

Dataset #: 5
Motif ID: 51
Motif name: TFM2
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 10
Similarity score: 0.0606033

Alignment:
CHCCBCCKMCTCCKCM
----GCCYCMCCCD--

Original motif     Consensus sequence: RGRGGAGRRGGHGGDG Reverse complement motif     Consensus sequence: CHCCBCCKMCTCCKCM

Dataset #: 3
Motif ID: 22
Motif name: Zfx
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 10
Similarity score: 0.0623591

Alignment:
BBVGCCBVGGCCTV
-GCCYCMCCCD---

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB

Dataset #: 3
Motif ID: 24
Motif name: SP1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0663136

Alignment:
GGGGGYGGGG
DGGGYGKGGC

Original motif     Consensus sequence: CCCCKCCCCC Reverse complement motif     Consensus sequence: GGGGGYGGGG

Dataset #: 3
Motif ID: 34
Motif name: Myc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0686848

Alignment:
VGCACGTGGH
DGGGYGKGGC

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV

Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 9
Number of overlap: 10
Similarity score: 0.06956

Alignment:
DGVBCABTGDWGCGKRRCSR
--------DGGGYGKGGC--

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD

Dataset #: 3 Motif ID: 28 Motif name: E2F1

Original motif     Consensus sequence: TTTSGCGC Reverse complement motif     Consensus sequence: GCGCSAAA

Best Matches for Motif ID 28 (Highest to Lowest)

Dataset #: 3
Motif ID: 30
Motif name: PLAG1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0568827

Alignment:
GGGGCCCAAGGGGG
-GCGCSAAA-----

Original motif     Consensus sequence: GGGGCCCAAGGGGG Reverse complement motif     Consensus sequence: CCCCCTTGGGCCCC

Dataset #: 4
Motif ID: 39
Motif name: kCAGCCAATmr
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0624791

Alignment:
DCAGCCAATVR
-GCGCSAAA--

Original motif     Consensus sequence: DCAGCCAATVR Reverse complement motif     Consensus sequence: MBATTGGCTGH

Dataset #: 5
Motif ID: 50
Motif name: TFF11
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0781129

Alignment:
GCVCCGCCMCCYCC
---GCGCSAAA---

Original motif     Consensus sequence: GGMGGRGGCGGVGC Reverse complement motif     Consensus sequence: GCVCCGCCMCCYCC

Dataset #: 3
Motif ID: 23
Motif name: Egr1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0784105

Alignment:
YCGCCCACGCH
GCGCSAAA---

Original motif     Consensus sequence: HGCGTGGGCGK Reverse complement motif     Consensus sequence: YCGCCCACGCH

Dataset #: 5
Motif ID: 49
Motif name: TFF1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0798986

Alignment:
CGGVGCCGCVGC
--GCGCSAAA--

Original motif     Consensus sequence: CGGVGCCGCVGC Reverse complement motif     Consensus sequence: GCVGCGGCBCCG

Dataset #: 2
Motif ID: 15
Motif name: Motif 15
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0836188

Alignment:
TTTTATTGTYAT
---TTTSGCGC-

Original motif     Consensus sequence: ATMACAATAAAA Reverse complement motif     Consensus sequence: TTTTATTGTYAT

Dataset #: 2
Motif ID: 11
Motif name: Motif 11
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0836188

Alignment:
TTTCATWAAAT
--GCGCSAAA-

Original motif     Consensus sequence: ATTTWATGAAA Reverse complement motif     Consensus sequence: TTTCATWAAAT

Dataset #: 5
Motif ID: 56
Motif name: TFM11
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 19
Number of overlap: 7
Similarity score: 0.569963

Alignment:
-HDWVAAAHAAAAAMAAAMWWWHBWA
GCGCSAAA------------------

Original motif     Consensus sequence: HDWVAAAHAAAAAMAAAMWWWHBWA Reverse complement motif     Consensus sequence: TWVHWWWYTTTYTTTTTHTTTVWBH

Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 9
Number of overlap: 7
Similarity score: 0.571005

Alignment:
-BBGGGGCGGGGCGGB
TTTSGCGC--------

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB

Dataset #: 5
Motif ID: 48
Motif name: TFW3
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 7
Similarity score: 0.571119

Alignment:
CGGCYBCGCG-
---TTTSGCGC

Original motif     Consensus sequence: CGGCYBCGCG Reverse complement motif     Consensus sequence: CGCGBMGCCG

Dataset #: 3 Motif ID: 29 Motif name: HIF1AARNT

Original motif     Consensus sequence: VBACGTGV Reverse complement motif     Consensus sequence: VCACGTBV

Best Matches for Motif ID 29 (Highest to Lowest)

Dataset #: 3
Motif ID: 33
Motif name: Mycn
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0123101

Alignment:
GCCACGTGSD
-VBACGTGV-

Original motif     Consensus sequence: HSCACGTGGC Reverse complement motif     Consensus sequence: GCCACGTGSD

Dataset #: 3
Motif ID: 34
Motif name: Myc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0144491

Alignment:
DCCACGTGCV
-VBACGTGV-

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV

Dataset #: 4
Motif ID: 40
Motif name: kcACCTGCAgc
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0295473

Alignment:
GBTGCAGGTGB
---VCACGTBV

Original motif     Consensus sequence: BCACCTGCABC Reverse complement motif     Consensus sequence: GBTGCAGGTGB

Dataset #: 4
Motif ID: 42
Motif name: sSGTCACGTGACSs
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0314837

Alignment:
SGGTCACGTGACCS
---VCACGTBV---

Original motif     Consensus sequence: SGGTCACGTGACCS Reverse complement motif     Consensus sequence: SGGTCACGTGACCS

Dataset #: 3
Motif ID: 26
Motif name: MIZF
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0377204

Alignment:
GCGGACGTTV
--VCACGTBV

Original motif     Consensus sequence: BAACGTCCGC Reverse complement motif     Consensus sequence: GCGGACGTTV

Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 8
Number of overlap: 8
Similarity score: 0.0556891

Alignment:
MSGKKRCGCWDCABTGBBCD
-----VCACGTBV-------

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD

Dataset #: 4
Motif ID: 44
Motif name: dhACATTCTkh
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0640024

Alignment:
DHACATTCTGH
VCACGTBV---

Original motif     Consensus sequence: DHACATTCTGH Reverse complement motif     Consensus sequence: HCAGAATGTHD

Dataset #: 3
Motif ID: 35
Motif name: GABPA
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0648153

Alignment:
CCGGAAGTGVV
--VCACGTBV-

Original motif     Consensus sequence: CCGGAAGTGVV Reverse complement motif     Consensus sequence: VVCACTTCCGG

Dataset #: 5
Motif ID: 47
Motif name: TFW2
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0660185

Alignment:
CCGCGCGS
VBACGTGV

Original motif     Consensus sequence: SCGCGCGG Reverse complement motif     Consensus sequence: CCGCGCGS

Dataset #: 5
Motif ID: 50
Motif name: TFF11
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.067219

Alignment:
GCVCCGCCMCCYCC
------VCACGTBV

Original motif     Consensus sequence: GGMGGRGGCGGVGC Reverse complement motif     Consensus sequence: GCVCCGCCMCCYCC

Dataset #: 3 Motif ID: 30 Motif name: PLAG1

Original motif     Consensus sequence: GGGGCCCAAGGGGG Reverse complement motif     Consensus sequence: CCCCCTTGGGCCCC

Best Matches for Motif ID 30 (Highest to Lowest)

Dataset #: 5
Motif ID: 54
Motif name: TFM12
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 6
Number of overlap: 14
Similarity score: 0.0876918

Alignment:
CYYCBBCYYYTCCHCCTYYY
-CCCCCTTGGGCCCC-----

Original motif     Consensus sequence: CYYCBBCYYYTCCHCCTYYY Reverse complement motif     Consensus sequence: KKKAGGDGGAKKMGBBGKMG

Dataset #: 5
Motif ID: 51
Motif name: TFM2
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 14
Similarity score: 0.0880716

Alignment:
CHCCBCCKMCTCCKCM
--CCCCCTTGGGCCCC

Original motif     Consensus sequence: RGRGGAGRRGGHGGDG Reverse complement motif     Consensus sequence: CHCCBCCKMCTCCKCM

Dataset #: 3
Motif ID: 22
Motif name: Zfx
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0886295

Alignment:
VAGGCCBBGGCVBB
GGGGCCCAAGGGGG

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB

Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 14
Similarity score: 0.0904945

Alignment:
BCCGCCCCGCCCCBB
CCCCCTTGGGCCCC-

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB

Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0943783

Alignment:
DGVBCABTGDWGCGKRRCSR
GGGGCCCAAGGGGG------

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD

Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 13
Similarity score: 0.588053

Alignment:
-MSGGGGCGGGGYSG
GGGGCCCAAGGGGG-

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG

Dataset #: 5
Motif ID: 50
Motif name: TFF11
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 13
Similarity score: 0.589357

Alignment:
GCVCCGCCMCCYCC-
-CCCCCTTGGGCCCC

Original motif     Consensus sequence: GGMGGRGGCGGVGC Reverse complement motif     Consensus sequence: GCVCCGCCMCCYCC

Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 13
Similarity score: 0.595227

Alignment:
-HVGCCCCGCCCCBB
CCCCCTTGGGCCCC-

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD

Dataset #: 5
Motif ID: 49
Motif name: TFF1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 1.09276

Alignment:
CGGVGCCGCVGC--
GGGGCCCAAGGGGG

Original motif     Consensus sequence: CGGVGCCGCVGC Reverse complement motif     Consensus sequence: GCVGCGGCBCCG

Dataset #: 3
Motif ID: 24
Motif name: SP1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 2.07807

Alignment:
----GGGGGYGGGG
GGGGCCCAAGGGGG

Original motif     Consensus sequence: CCCCKCCCCC Reverse complement motif     Consensus sequence: GGGGGYGGGG

Dataset #: 3 Motif ID: 31 Motif name: Pax5

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD

Best Matches for Motif ID 31 (Highest to Lowest)

Dataset #: 5
Motif ID: 54
Motif name: TFM12
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.0373929

Alignment:
KKKAGGDGGAKKMGBBGKMG
DGVBCABTGDWGCGKRRCSR

Original motif     Consensus sequence: CYYCBBCYYYTCCHCCTYYY Reverse complement motif     Consensus sequence: KKKAGGDGGAKKMGBBGKMG

Dataset #: 5
Motif ID: 56
Motif name: TFM11
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 6
Number of overlap: 20
Similarity score: 0.0546306

Alignment:
HDWVAAAHAAAAAMAAAMWWWHBWA
DGVBCABTGDWGCGKRRCSR-----

Original motif     Consensus sequence: HDWVAAAHAAAAAMAAAMWWWHBWA Reverse complement motif     Consensus sequence: TWVHWWWYTTTYTTTTTHTTTVWBH

Dataset #: 5
Motif ID: 53
Motif name: TFM3
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 17
Similarity score: 1.5457

Alignment:
TWAAWTTVTGAAAAAHWW---
-DGVBCABTGDWGCGKRRCSR

Original motif     Consensus sequence: WWHTTTTTCABAAWTTWA Reverse complement motif     Consensus sequence: TWAAWTTVTGAAAAAHWW

Dataset #: 5
Motif ID: 51
Motif name: TFM2
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 16
Similarity score: 2.0519

Alignment:
RGRGGAGRRGGHGGDG----
MSGKKRCGCWDCABTGBBCD

Original motif     Consensus sequence: RGRGGAGRRGGHGGDG Reverse complement motif     Consensus sequence: CHCCBCCKMCTCCKCM

Dataset #: 5
Motif ID: 52
Motif name: TFM1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 16
Similarity score: 2.05456

Alignment:
ABAAAAAAWHAAAAARAW----
--DGVBCABTGDWGCGKRRCSR

Original motif     Consensus sequence: WTKTTTTTHWTTTTTTBT Reverse complement motif     Consensus sequence: ABAAAAAAWHAAAAARAW

Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 15
Similarity score: 2.54483

Alignment:
BBGGGGCGGGGCGGB-----
MSGKKRCGCWDCABTGBBCD

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB

Dataset #: 5
Motif ID: 55
Motif name: TFM13
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 6
Number of overlap: 15
Similarity score: 2.55478

Alignment:
WAHHTVTTYKAAAAWTTRAT-----
-----MSGKKRCGCWDCABTGBBCD

Original motif     Consensus sequence: ATKAAWTTTTRMAABAHHTW Reverse complement motif     Consensus sequence: WAHHTVTTYKAAAAWTTRAT

Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 3.0203

Alignment:
------BBGGGGCGGGGCVD
DGVBCABTGDWGCGKRRCSR

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD

Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 3.02361

Alignment:
------CSKCCCCGCCCCSY
MSGKKRCGCWDCABTGBBCD

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG

Dataset #: 2
Motif ID: 2
Motif name: Motif 2
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 3.02394

Alignment:
------MTMMTCMMTCTKCK
MSGKKRCGCWDCABTGBBCD

Original motif     Consensus sequence: RGRAGARRGARRAR Reverse complement motif     Consensus sequence: MTMMTCMMTCTKCK

Dataset #: 3 Motif ID: 32 Motif name: ArntAhr

Original motif     Consensus sequence: YGCGTG Reverse complement motif     Consensus sequence: CACGCM

Best Matches for Motif ID 32 (Highest to Lowest)

Dataset #: 3
Motif ID: 23
Motif name: Egr1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0

Alignment:
YCGCCCACGCH
-----CACGCM

Original motif     Consensus sequence: HGCGTGGGCGK Reverse complement motif     Consensus sequence: YCGCCCACGCH

Dataset #: 3
Motif ID: 29
Motif name: HIF1AARNT
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.0112447

Alignment:
VBACGTGV
-YGCGTG-

Original motif     Consensus sequence: VBACGTGV Reverse complement motif     Consensus sequence: VCACGTBV

Dataset #: 3
Motif ID: 33
Motif name: Mycn
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 6
Similarity score: 0.0377949

Alignment:
GCCACGTGSD
--YGCGTG--

Original motif     Consensus sequence: HSCACGTGGC Reverse complement motif     Consensus sequence: GCCACGTGSD

Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 6
Similarity score: 0.0396403

Alignment:
HVGCCCCGCCCCBB
----CACGCM----

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD

Dataset #: 3
Motif ID: 34
Motif name: Myc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.0399214

Alignment:
DCCACGTGCV
--YGCGTG--

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV

Dataset #: 1
Motif ID: 1
Motif name: Motif 1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 6
Similarity score: 0.040625

Alignment:
GCCCCGCC
--CACGCM

Original motif     Consensus sequence: GGCGGGGC Reverse complement motif     Consensus sequence: GCCCCGCC

Dataset #: 4
Motif ID: 42
Motif name: sSGTCACGTGACSs
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 6
Similarity score: 0.0412037

Alignment:
SGGTCACGTGACCS
----YGCGTG----

Original motif     Consensus sequence: SGGTCACGTGACCS Reverse complement motif     Consensus sequence: SGGTCACGTGACCS

Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 6
Number of overlap: 6
Similarity score: 0.0425089

Alignment:
BCCGCCCCGCCCCBB
-----CACGCM----

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB

Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 6
Similarity score: 0.0465867

Alignment:
MSGGGGCGGGGYSG
----YGCGTG----

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG

Dataset #: 5
Motif ID: 47
Motif name: TFW2
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.0469722

Alignment:
SCGCGCGG
-YGCGTG-

Original motif     Consensus sequence: SCGCGCGG Reverse complement motif     Consensus sequence: CCGCGCGS

Dataset #: 3 Motif ID: 33 Motif name: Mycn

Original motif     Consensus sequence: HSCACGTGGC Reverse complement motif     Consensus sequence: GCCACGTGSD

Best Matches for Motif ID 33 (Highest to Lowest)

Dataset #: 3
Motif ID: 34
Motif name: Myc
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0

Alignment:
DCCACGTGCV
GCCACGTGSD

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV

Dataset #: 4
Motif ID: 42
Motif name: sSGTCACGTGACSs
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 10
Similarity score: 0.0628441

Alignment:
SGGTCACGTGACCS
--HSCACGTGGC--

Original motif     Consensus sequence: SGGTCACGTGACCS Reverse complement motif     Consensus sequence: SGGTCACGTGACCS

Dataset #: 3
Motif ID: 35
Motif name: GABPA
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0884396

Alignment:
VVCACTTCCGG
GCCACGTGSD-

Original motif     Consensus sequence: CCGGAAGTGVV Reverse complement motif     Consensus sequence: VVCACTTCCGG

Dataset #: 3
Motif ID: 27
Motif name: Klf4
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0893272

Alignment:
DGGGYGKGGC
HSCACGTGGC

Original motif     Consensus sequence: DGGGYGKGGC Reverse complement motif     Consensus sequence: GCCYCMCCCD

Dataset #: 5
Motif ID: 50
Motif name: TFF11
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 10
Similarity score: 0.0895444

Alignment:
GGMGGRGGCGGVGC
--HSCACGTGGC--

Original motif     Consensus sequence: GGMGGRGGCGGVGC Reverse complement motif     Consensus sequence: GCVCCGCCMCCYCC

Dataset #: 3
Motif ID: 22
Motif name: Zfx
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 10
Similarity score: 0.0899944

Alignment:
VAGGCCBBGGCVBB
---GCCACGTGSD-

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB

Dataset #: 3
Motif ID: 30
Motif name: PLAG1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 10
Similarity score: 0.0921439

Alignment:
CCCCCTTGGGCCCC
----HSCACGTGGC

Original motif     Consensus sequence: GGGGCCCAAGGGGG Reverse complement motif     Consensus sequence: CCCCCTTGGGCCCC

Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 10
Similarity score: 0.093472

Alignment:
HVGCCCCGCCCCBB
--GCCACGTGSD--

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD

Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 10
Similarity score: 0.0964516

Alignment:
MSGGGGCGGGGYSG
--HSCACGTGGC--

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG

Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 10
Similarity score: 0.0979367

Alignment:
BCCGCCCCGCCCCBB
---GCCACGTGSD--

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB

Dataset #: 3 Motif ID: 34 Motif name: Myc

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV

Best Matches for Motif ID 34 (Highest to Lowest)

Dataset #: 3
Motif ID: 33
Motif name: Mycn
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0

Alignment:
HSCACGTGGC
VGCACGTGGH

Original motif     Consensus sequence: HSCACGTGGC Reverse complement motif     Consensus sequence: GCCACGTGSD

Dataset #: 4
Motif ID: 42
Motif name: sSGTCACGTGACSs
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 10
Similarity score: 0.0646601

Alignment:
SGGTCACGTGACCS
--DCCACGTGCV--

Original motif     Consensus sequence: SGGTCACGTGACCS Reverse complement motif     Consensus sequence: SGGTCACGTGACCS

Dataset #: 3
Motif ID: 35
Motif name: GABPA
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.0840341

Alignment:
VVCACTTCCGG
DCCACGTGCV-

Original motif     Consensus sequence: CCGGAAGTGVV Reverse complement motif     Consensus sequence: VVCACTTCCGG

Dataset #: 5
Motif ID: 50
Motif name: TFF11
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 10
Similarity score: 0.0851555

Alignment:
GGMGGRGGCGGVGC
--VGCACGTGGH--

Original motif     Consensus sequence: GGMGGRGGCGGVGC Reverse complement motif     Consensus sequence: GCVCCGCCMCCYCC

Dataset #: 3
Motif ID: 27
Motif name: Klf4
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0883745

Alignment:
DGGGYGKGGC
VGCACGTGGH

Original motif     Consensus sequence: DGGGYGKGGC Reverse complement motif     Consensus sequence: GCCYCMCCCD

Dataset #: 3
Motif ID: 22
Motif name: Zfx
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.0925451

Alignment:
VAGGCCBBGGCVBB
---DCCACGTGCV-

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB

Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 10
Similarity score: 0.0928504

Alignment:
HVGCCCCGCCCCBB
--DCCACGTGCV--

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD

Dataset #: 3
Motif ID: 30
Motif name: PLAG1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 10
Similarity score: 0.0930375

Alignment:
CCCCCTTGGGCCCC
----VGCACGTGGH

Original motif     Consensus sequence: GGGGCCCAAGGGGG Reverse complement motif     Consensus sequence: CCCCCTTGGGCCCC

Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 10
Similarity score: 0.0941376

Alignment:
MSGGGGCGGGGYSG
--VGCACGTGGH--

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG

Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 10
Similarity score: 0.0974172

Alignment:
BCCGCCCCGCCCCBB
---DCCACGTGCV--

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB

Dataset #: 3 Motif ID: 35 Motif name: GABPA

Original motif     Consensus sequence: CCGGAAGTGVV Reverse complement motif     Consensus sequence: VVCACTTCCGG

Best Matches for Motif ID 35 (Highest to Lowest)

Dataset #: 5
Motif ID: 54
Motif name: TFM12
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 11
Similarity score: 0.0360984

Alignment:
CYYCBBCYYYTCCHCCTYYY
----VVCACTTCCGG-----

Original motif     Consensus sequence: CYYCBBCYYYTCCHCCTYYY Reverse complement motif     Consensus sequence: KKKAGGDGGAKKMGBBGKMG

Dataset #: 5
Motif ID: 51
Motif name: TFM2
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 11
Similarity score: 0.0445566

Alignment:
RGRGGAGRRGGHGGDG
-CCGGAAGTGVV----

Original motif     Consensus sequence: RGRGGAGRRGGHGGDG Reverse complement motif     Consensus sequence: CHCCBCCKMCTCCKCM

Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 8
Number of overlap: 11
Similarity score: 0.0446257

Alignment:
DGVBCABTGDWGCGKRRCSR
-------VVCACTTCCGG--

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD

Dataset #: 3
Motif ID: 22
Motif name: Zfx
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0457327

Alignment:
BBVGCCBVGGCCTV
VVCACTTCCGG---

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB

Dataset #: 4
Motif ID: 40
Motif name: kcACCTGCAgc
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0483841

Alignment:
BCACCTGCABC
VVCACTTCCGG

Original motif     Consensus sequence: BCACCTGCABC Reverse complement motif     Consensus sequence: GBTGCAGGTGB

Dataset #: 4
Motif ID: 45
Motif name: wbgTAAATAww
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0492127

Alignment:
DBGTAAATAHD
CCGGAAGTGVV

Original motif     Consensus sequence: DBGTAAATAHD Reverse complement motif     Consensus sequence: DHTATTTACBD

Dataset #: 4
Motif ID: 44
Motif name: dhACATTCTkh
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0495154

Alignment:
DHACATTCTGH
VVCACTTCCGG

Original motif     Consensus sequence: DHACATTCTGH Reverse complement motif     Consensus sequence: HCAGAATGTHD

Dataset #: 5
Motif ID: 50
Motif name: TFF11
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.0504656

Alignment:
GGMGGRGGCGGVGC
-CCGGAAGTGVV--

Original motif     Consensus sequence: GGMGGRGGCGGVGC Reverse complement motif     Consensus sequence: GCVCCGCCMCCYCC

Dataset #: 2
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0518418

Alignment:
AATTYDGAARTAWW
---CCGGAAGTGVV

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.0554249

Alignment:
BCCGCCCCGCCCCBB
---VVCACTTCCGG-

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB

Dataset #: 4 Motif ID: 36 Motif name: csGCCCCGCCCCsc

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD

Best Matches for Motif ID 36 (Highest to Lowest)

Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0

Alignment:
BBGGGGCGGGGCGGB
BBGGGGCGGGGCVD-

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB

Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0117332

Alignment:
CSKCCCCGCCCCSY
HVGCCCCGCCCCBB

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG

Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0747029

Alignment:
MSGKKRCGCWDCABTGBBCD
------HVGCCCCGCCCCBB

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD

Dataset #: 5
Motif ID: 54
Motif name: TFM12
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 14
Similarity score: 0.0777991

Alignment:
CYYCBBCYYYTCCHCCTYYY
---HVGCCCCGCCCCBB---

Original motif     Consensus sequence: CYYCBBCYYYTCCHCCTYYY Reverse complement motif     Consensus sequence: KKKAGGDGGAKKMGBBGKMG

Dataset #: 5
Motif ID: 51
Motif name: TFM2
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 14
Similarity score: 0.0880609

Alignment:
RGRGGAGRRGGHGGDG
BBGGGGCGGGGCVD--

Original motif     Consensus sequence: RGRGGAGRRGGHGGDG Reverse complement motif     Consensus sequence: CHCCBCCKMCTCCKCM

Dataset #: 3
Motif ID: 22
Motif name: Zfx
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0884848

Alignment:
BBVGCCBVGGCCTV
BBGGGGCGGGGCVD

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB

Dataset #: 5
Motif ID: 50
Motif name: TFF11
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0937271

Alignment:
GCVCCGCCMCCYCC
HVGCCCCGCCCCBB

Original motif     Consensus sequence: GGMGGRGGCGGVGC Reverse complement motif     Consensus sequence: GCVCCGCCMCCYCC

Dataset #: 4
Motif ID: 42
Motif name: sSGTCACGTGACSs
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0971132

Alignment:
SGGTCACGTGACCS
HVGCCCCGCCCCBB

Original motif     Consensus sequence: SGGTCACGTGACCS Reverse complement motif     Consensus sequence: SGGTCACGTGACCS

Dataset #: 3
Motif ID: 30
Motif name: PLAG1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 13
Similarity score: 0.609319

Alignment:
GGGGCCCAAGGGGG-
-BBGGGGCGGGGCVD

Original motif     Consensus sequence: GGGGCCCAAGGGGG Reverse complement motif     Consensus sequence: CCCCCTTGGGCCCC

Dataset #: 5
Motif ID: 49
Motif name: TFF1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 1.08016

Alignment:
CGGVGCCGCVGC--
HVGCCCCGCCCCBB

Original motif     Consensus sequence: CGGVGCCGCVGC Reverse complement motif     Consensus sequence: GCVGCGGCBCCG

Dataset #: 4 Motif ID: 37 Motif name: tkAAATAATAtw

Original motif     Consensus sequence: HDAAATAATAHW Reverse complement motif     Consensus sequence: WHTATTATTTDH

Best Matches for Motif ID 37 (Highest to Lowest)

Dataset #: 4
Motif ID: 41
Motif name: wwAAATAATAtw
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0

Alignment:
HDAAATAATADD
HDAAATAATAHW

Original motif     Consensus sequence: HDAAATAATADD Reverse complement motif     Consensus sequence: DDTATTATTTDH

Dataset #: 2
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 12
Similarity score: 0.0522317

Alignment:
TWSTTTWAWTTTWT
-WHTATTATTTDH-

Original motif     Consensus sequence: AWAAAWTWAAASWA Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

Dataset #: 5
Motif ID: 56
Motif name: TFM11
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 12
Number of overlap: 12
Similarity score: 0.0590505

Alignment:
TWVHWWWYTTTYTTTTTHTTTVWBH
-----------WHTATTATTTDH--

Original motif     Consensus sequence: HDWVAAAHAAAAAMAAAMWWWHBWA Reverse complement motif     Consensus sequence: TWVHWWWYTTTYTTTTTHTTTVWBH

Dataset #: 5
Motif ID: 52
Motif name: TFM1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.0637702

Alignment:
ABAAAAAAWHAAAAARAW
HDAAATAATAHW------

Original motif     Consensus sequence: WTKTTTTTHWTTTTTTBT Reverse complement motif     Consensus sequence: ABAAAAAAWHAAAAARAW

Dataset #: 2
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.0641975

Alignment:
AATHATATWTHAAA
--WHTATTATTTDH

Original motif     Consensus sequence: AATHATATWTHAAA Reverse complement motif     Consensus sequence: TTTDAWATATHATT

Dataset #: 5
Motif ID: 55
Motif name: TFM13
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.0704475

Alignment:
ATKAAWTTTTRMAABAHHTW
WHTATTATTTDH--------

Original motif     Consensus sequence: ATKAAWTTTTRMAABAHHTW Reverse complement motif     Consensus sequence: WAHHTVTTYKAAAAWTTRAT

Dataset #: 2
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 12
Similarity score: 0.0704475

Alignment:
AAATTKTATTTAWT
-WHTATTATTTDH-

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

Dataset #: 5
Motif ID: 53
Motif name: TFM3
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.0763819

Alignment:
WWHTTTTTCABAAWTTWA
------WHTATTATTTDH

Original motif     Consensus sequence: WWHTTTTTCABAAWTTWA Reverse complement motif     Consensus sequence: TWAAWTTVTGAAAAAHWW

Dataset #: 2
Motif ID: 16
Motif name: Motif 16
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.0864198

Alignment:
TCAAAATKAWTTGT
--WHTATTATTTDH

Original motif     Consensus sequence: ACAAWTRATTTTGA Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT

Dataset #: 2
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.09076

Alignment:
WWTAKTTCDKAATT
WHTATTATTTDH--

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

Dataset #: 4 Motif ID: 38 Motif name: cccGCCCCGCCCCsb

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB

Best Matches for Motif ID 38 (Highest to Lowest)

Dataset #: 5
Motif ID: 54
Motif name: TFM12
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 15
Similarity score: 0.0773345

Alignment:
CYYCBBCYYYTCCHCCTYYY
--BCCGCCCCGCCCCBB---

Original motif     Consensus sequence: CYYCBBCYYYTCCHCCTYYY Reverse complement motif     Consensus sequence: KKKAGGDGGAKKMGBBGKMG

Dataset #: 5
Motif ID: 51
Motif name: TFM2
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 15
Similarity score: 0.0869149

Alignment:
RGRGGAGRRGGHGGDG
BBGGGGCGGGGCGGB-

Original motif     Consensus sequence: RGRGGAGRRGGHGGDG Reverse complement motif     Consensus sequence: CHCCBCCKMCTCCKCM

Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 15
Similarity score: 0.0992376

Alignment:
MSGKKRCGCWDCABTGBBCD
BBGGGGCGGGGCGGB-----

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD

Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.5

Alignment:
-HVGCCCCGCCCCBB
BCCGCCCCGCCCCBB

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD

Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.513015

Alignment:
-CSKCCCCGCCCCSY
BCCGCCCCGCCCCBB

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG

Dataset #: 3
Motif ID: 22
Motif name: Zfx
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.574434

Alignment:
BBVGCCBVGGCCTV-
BCCGCCCCGCCCCBB

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB

Dataset #: 5
Motif ID: 50
Motif name: TFF11
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.58333

Alignment:
GCVCCGCCMCCYCC-
BCCGCCCCGCCCCBB

Original motif     Consensus sequence: GGMGGRGGCGGVGC Reverse complement motif     Consensus sequence: GCVCCGCCMCCYCC

Dataset #: 4
Motif ID: 42
Motif name: sSGTCACGTGACSs
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.601399

Alignment:
SGGTCACGTGACCS-
BBGGGGCGGGGCGGB

Original motif     Consensus sequence: SGGTCACGTGACCS Reverse complement motif     Consensus sequence: SGGTCACGTGACCS

Dataset #: 3
Motif ID: 30
Motif name: PLAG1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.604586

Alignment:
GGGGCCCAAGGGGG-
BBGGGGCGGGGCGGB

Original motif     Consensus sequence: GGGGCCCAAGGGGG Reverse complement motif     Consensus sequence: CCCCCTTGGGCCCC

Dataset #: 5
Motif ID: 49
Motif name: TFF1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 1.58073

Alignment:
---GCVGCGGCBCCG
BCCGCCCCGCCCCBB

Original motif     Consensus sequence: CGGVGCCGCVGC Reverse complement motif     Consensus sequence: GCVGCGGCBCCG

Dataset #: 4 Motif ID: 39 Motif name: kCAGCCAATmr

Original motif     Consensus sequence: DCAGCCAATVR Reverse complement motif     Consensus sequence: MBATTGGCTGH

Best Matches for Motif ID 39 (Highest to Lowest)

Dataset #: 4
Motif ID: 37
Motif name: tkAAATAATAtw
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.0559269

Alignment:
WHTATTATTTDH
-MBATTGGCTGH

Original motif     Consensus sequence: HDAAATAATAHW Reverse complement motif     Consensus sequence: WHTATTATTTDH

Dataset #: 4
Motif ID: 44
Motif name: dhACATTCTkh
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0588235

Alignment:
HCAGAATGTHD
DCAGCCAATVR

Original motif     Consensus sequence: DHACATTCTGH Reverse complement motif     Consensus sequence: HCAGAATGTHD

Dataset #: 4
Motif ID: 41
Motif name: wwAAATAATAtw
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0597643

Alignment:
DDTATTATTTDH
-MBATTGGCTGH

Original motif     Consensus sequence: HDAAATAATADD Reverse complement motif     Consensus sequence: DDTATTATTTDH

Dataset #: 4
Motif ID: 40
Motif name: kcACCTGCAgc
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0599548

Alignment:
BCACCTGCABC
MBATTGGCTGH

Original motif     Consensus sequence: BCACCTGCABC Reverse complement motif     Consensus sequence: GBTGCAGGTGB

Dataset #: 5
Motif ID: 50
Motif name: TFF11
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.0614719

Alignment:
GCVCCGCCMCCYCC
--DCAGCCAATVR-

Original motif     Consensus sequence: GGMGGRGGCGGVGC Reverse complement motif     Consensus sequence: GCVCCGCCMCCYCC

Dataset #: 5
Motif ID: 56
Motif name: TFM11
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 7
Number of overlap: 11
Similarity score: 0.0635027

Alignment:
HDWVAAAHAAAAAMAAAMWWWHBWA
--------DCAGCCAATVR------

Original motif     Consensus sequence: HDWVAAAHAAAAAMAAAMWWWHBWA Reverse complement motif     Consensus sequence: TWVHWWWYTTTYTTTTTHTTTVWBH

Dataset #: 2
Motif ID: 18
Motif name: Motif 18
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0661765

Alignment:
TTAGWTWATAA
DCAGCCAATVR

Original motif     Consensus sequence: TTAGWTWATAA Reverse complement motif     Consensus sequence: TTATWAWCTAA

Dataset #: 3
Motif ID: 35
Motif name: GABPA
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.56089

Alignment:
-CCGGAAGTGVV
DCAGCCAATVR-

Original motif     Consensus sequence: CCGGAAGTGVV Reverse complement motif     Consensus sequence: VVCACTTCCGG

Dataset #: 4
Motif ID: 45
Motif name: wbgTAAATAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.561975

Alignment:
DHTATTTACBD-
-MBATTGGCTGH

Original motif     Consensus sequence: DBGTAAATAHD Reverse complement motif     Consensus sequence: DHTATTTACBD

Dataset #: 3
Motif ID: 22
Motif name: Zfx
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 10
Similarity score: 0.563709

Alignment:
VAGGCCBBGGCVBB-
----DCAGCCAATVR

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB

Dataset #: 4 Motif ID: 40 Motif name: kcACCTGCAgc

Original motif     Consensus sequence: BCACCTGCABC Reverse complement motif     Consensus sequence: GBTGCAGGTGB

Best Matches for Motif ID 40 (Highest to Lowest)

Dataset #: 4
Motif ID: 43
Motif name: wsTACwGTAsw
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0215284

Alignment:
DBTACWGTAVH
BCACCTGCABC

Original motif     Consensus sequence: HVTACWGTABD Reverse complement motif     Consensus sequence: DBTACWGTAVH

Dataset #: 4
Motif ID: 44
Motif name: dhACATTCTkh
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0254134

Alignment:
DHACATTCTGH
BCACCTGCABC

Original motif     Consensus sequence: DHACATTCTGH Reverse complement motif     Consensus sequence: HCAGAATGTHD

Dataset #: 4
Motif ID: 42
Motif name: sSGTCACGTGACSs
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 11
Similarity score: 0.031338

Alignment:
SGGTCACGTGACCS
---BCACCTGCABC

Original motif     Consensus sequence: SGGTCACGTGACCS Reverse complement motif     Consensus sequence: SGGTCACGTGACCS

Dataset #: 5
Motif ID: 50
Motif name: TFF11
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 11
Similarity score: 0.034471

Alignment:
GCVCCGCCMCCYCC
BCACCTGCABC---

Original motif     Consensus sequence: GGMGGRGGCGGVGC Reverse complement motif     Consensus sequence: GCVCCGCCMCCYCC

Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.0402518

Alignment:
HVGCCCCGCCCCBB
-BCACCTGCABC--

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD

Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.0411257

Alignment:
CSKCCCCGCCCCSY
-BCACCTGCABC--

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG

Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 11
Similarity score: 0.0420218

Alignment:
DGVBCABTGDWGCGKRRCSR
----GBTGCAGGTGB-----

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD

Dataset #: 3
Motif ID: 35
Motif name: GABPA
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0423275

Alignment:
CCGGAAGTGVV
GBTGCAGGTGB

Original motif     Consensus sequence: CCGGAAGTGVV Reverse complement motif     Consensus sequence: VVCACTTCCGG

Dataset #: 4
Motif ID: 39
Motif name: kCAGCCAATmr
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0439586

Alignment:
DCAGCCAATVR
GBTGCAGGTGB

Original motif     Consensus sequence: DCAGCCAATVR Reverse complement motif     Consensus sequence: MBATTGGCTGH

Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 11
Similarity score: 0.0461444

Alignment:
BCCGCCCCGCCCCBB
--BCACCTGCABC--

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB

Dataset #: 4 Motif ID: 41 Motif name: wwAAATAATAtw

Original motif     Consensus sequence: HDAAATAATADD Reverse complement motif     Consensus sequence: DDTATTATTTDH

Best Matches for Motif ID 41 (Highest to Lowest)

Dataset #: 4
Motif ID: 37
Motif name: tkAAATAATAtw
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0

Alignment:
HDAAATAATAHW
HDAAATAATADD

Original motif     Consensus sequence: HDAAATAATAHW Reverse complement motif     Consensus sequence: WHTATTATTTDH

Dataset #: 2
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 12
Similarity score: 0.0536028

Alignment:
AWAAAWTWAAASWA
-HDAAATAATADD-

Original motif     Consensus sequence: AWAAAWTWAAASWA Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

Dataset #: 5
Motif ID: 52
Motif name: TFM1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 7
Number of overlap: 12
Similarity score: 0.0565705

Alignment:
WTKTTTTTHWTTTTTTBT
------DDTATTATTTDH

Original motif     Consensus sequence: WTKTTTTTHWTTTTTTBT Reverse complement motif     Consensus sequence: ABAAAAAAWHAAAAARAW

Dataset #: 5
Motif ID: 56
Motif name: TFM11
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 12
Similarity score: 0.0575935

Alignment:
HDWVAAAHAAAAAMAAAMWWWHBWA
--HDAAATAATADD-----------

Original motif     Consensus sequence: HDWVAAAHAAAAAMAAAMWWWHBWA Reverse complement motif     Consensus sequence: TWVHWWWYTTTYTTTTTHTTTVWBH

Dataset #: 2
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 12
Similarity score: 0.0591821

Alignment:
AATHATATWTHAAA
--DDTATTATTTDH

Original motif     Consensus sequence: AATHATATWTHAAA Reverse complement motif     Consensus sequence: TTTDAWATATHATT

Dataset #: 5
Motif ID: 55
Motif name: TFM13
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.0712963

Alignment:
WAHHTVTTYKAAAAWTTRAT
--------HDAAATAATADD

Original motif     Consensus sequence: ATKAAWTTTTRMAABAHHTW Reverse complement motif     Consensus sequence: WAHHTVTTYKAAAAWTTRAT

Dataset #: 2
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 12
Similarity score: 0.0715278

Alignment:
AAATTKTATTTAWT
-DDTATTATTTDH-

Original motif     Consensus sequence: AWTAAATAYAATTT Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

Dataset #: 5
Motif ID: 53
Motif name: TFM3
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.0733516

Alignment:
WWHTTTTTCABAAWTTWA
------DDTATTATTTDH

Original motif     Consensus sequence: WWHTTTTTCABAAWTTWA Reverse complement motif     Consensus sequence: TWAAWTTVTGAAAAAHWW

Dataset #: 2
Motif ID: 16
Motif name: Motif 16
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.0912037

Alignment:
TCAAAATKAWTTGT
--DDTATTATTTDH

Original motif     Consensus sequence: ACAAWTRATTTTGA Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT

Dataset #: 2
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 12
Similarity score: 0.0924576

Alignment:
WWTAKTTCDKAATT
DDTATTATTTDH--

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

Dataset #: 4 Motif ID: 42 Motif name: sSGTCACGTGACSs

Original motif     Consensus sequence: SGGTCACGTGACCS Reverse complement motif     Consensus sequence: SGGTCACGTGACCS

Best Matches for Motif ID 42 (Highest to Lowest)

Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 7
Number of overlap: 14
Similarity score: 0.0518737

Alignment:
DGVBCABTGDWGCGKRRCSR
------SGGTCACGTGACCS

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD

Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0539097

Alignment:
BBGGGGCGGGGCVD
SGGTCACGTGACCS

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD

Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0581955

Alignment:
BCCGCCCCGCCCCBB
SGGTCACGTGACCS-

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB

Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0634135

Alignment:
MSGGGGCGGGGYSG
SGGTCACGTGACCS

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG

Dataset #: 5
Motif ID: 50
Motif name: TFF11
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 12
Similarity score: 1.05855

Alignment:
--GCVCCGCCMCCYCC
SGGTCACGTGACCS--

Original motif     Consensus sequence: GGMGGRGGCGGVGC Reverse complement motif     Consensus sequence: GCVCCGCCMCCYCC

Dataset #: 5
Motif ID: 49
Motif name: TFF1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 1.06047

Alignment:
--GCVGCGGCBCCG
SGGTCACGTGACCS

Original motif     Consensus sequence: CGGVGCCGCVGC Reverse complement motif     Consensus sequence: GCVGCGGCBCCG

Dataset #: 4
Motif ID: 40
Motif name: kcACCTGCAgc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 1.54742

Alignment:
---BCACCTGCABC
SGGTCACGTGACCS

Original motif     Consensus sequence: BCACCTGCABC Reverse complement motif     Consensus sequence: GBTGCAGGTGB

Dataset #: 5
Motif ID: 48
Motif name: TFW3
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 2.05201

Alignment:
----CGCGBMGCCG
SGGTCACGTGACCS

Original motif     Consensus sequence: CGGCYBCGCG Reverse complement motif     Consensus sequence: CGCGBMGCCG

Dataset #: 3
Motif ID: 23
Motif name: Egr1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 2.06209

Alignment:
----YCGCCCACGCH
SGGTCACGTGACCS-

Original motif     Consensus sequence: HGCGTGGGCGK Reverse complement motif     Consensus sequence: YCGCCCACGCH

Dataset #: 3
Motif ID: 30
Motif name: PLAG1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 8
Number of overlap: 7
Similarity score: 3.53253

Alignment:
CCCCCTTGGGCCCC-------
-------SGGTCACGTGACCS

Original motif     Consensus sequence: GGGGCCCAAGGGGG Reverse complement motif     Consensus sequence: CCCCCTTGGGCCCC

Dataset #: 4 Motif ID: 43 Motif name: wsTACwGTAsw

Original motif     Consensus sequence: HVTACWGTABD Reverse complement motif     Consensus sequence: DBTACWGTAVH

Best Matches for Motif ID 43 (Highest to Lowest)

Dataset #: 4
Motif ID: 40
Motif name: kcACCTGCAgc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0199592

Alignment:
GBTGCAGGTGB
HVTACWGTABD

Original motif     Consensus sequence: BCACCTGCABC Reverse complement motif     Consensus sequence: GBTGCAGGTGB

Dataset #: 4
Motif ID: 41
Motif name: wwAAATAATAtw
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0309343

Alignment:
DDTATTATTTDH
-HVTACWGTABD

Original motif     Consensus sequence: HDAAATAATADD Reverse complement motif     Consensus sequence: DDTATTATTTDH

Dataset #: 4
Motif ID: 37
Motif name: tkAAATAATAtw
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0337121

Alignment:
WHTATTATTTDH
-HVTACWGTABD

Original motif     Consensus sequence: HDAAATAATAHW Reverse complement motif     Consensus sequence: WHTATTATTTDH

Dataset #: 2
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 11
Similarity score: 0.0353535

Alignment:
AATTYDGAARTAWW
HVTACWGTABD---

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

Dataset #: 4
Motif ID: 45
Motif name: wbgTAAATAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.037518

Alignment:
DBGTAAATAHD
DBTACWGTAVH

Original motif     Consensus sequence: DBGTAAATAHD Reverse complement motif     Consensus sequence: DHTATTTACBD

Dataset #: 2
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 11
Similarity score: 0.0397727

Alignment:
TTTDAWATATHATT
DBTACWGTAVH---

Original motif     Consensus sequence: AATHATATWTHAAA Reverse complement motif     Consensus sequence: TTTDAWATATHATT

Dataset #: 5
Motif ID: 53
Motif name: TFM3
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 5
Number of overlap: 11
Similarity score: 0.0413797

Alignment:
TWAAWTTVTGAAAAAHWW
---HVTACWGTABD----

Original motif     Consensus sequence: WWHTTTTTCABAAWTTWA Reverse complement motif     Consensus sequence: TWAAWTTVTGAAAAAHWW

Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 6
Number of overlap: 11
Similarity score: 0.042298

Alignment:
DGVBCABTGDWGCGKRRCSR
-----HVTACWGTABD----

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD

Dataset #: 5
Motif ID: 55
Motif name: TFM13
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 11
Similarity score: 0.0445707

Alignment:
ATKAAWTTTTRMAABAHHTW
-------DBTACWGTAVH--

Original motif     Consensus sequence: ATKAAWTTTTRMAABAHHTW Reverse complement motif     Consensus sequence: WAHHTVTTYKAAAAWTTRAT

Dataset #: 2
Motif ID: 19
Motif name: Motif 19
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 11
Similarity score: 0.0460859

Alignment:
TTCWTAGATTAWA
DBTACWGTAVH--

Original motif     Consensus sequence: TTCWTAGATTAWA Reverse complement motif     Consensus sequence: TWTAATCTAWGAA

Dataset #: 4 Motif ID: 44 Motif name: dhACATTCTkh

Original motif     Consensus sequence: DHACATTCTGH Reverse complement motif     Consensus sequence: HCAGAATGTHD

Best Matches for Motif ID 44 (Highest to Lowest)

Dataset #: 5
Motif ID: 53
Motif name: TFM3
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 8
Number of overlap: 11
Similarity score: 0.0217516

Alignment:
TWAAWTTVTGAAAAAHWW
DHACATTCTGH-------

Original motif     Consensus sequence: WWHTTTTTCABAAWTTWA Reverse complement motif     Consensus sequence: TWAAWTTVTGAAAAAHWW

Dataset #: 4
Motif ID: 40
Motif name: kcACCTGCAgc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0238442

Alignment:
BCACCTGCABC
DHACATTCTGH

Original motif     Consensus sequence: BCACCTGCABC Reverse complement motif     Consensus sequence: GBTGCAGGTGB

Dataset #: 2
Motif ID: 16
Motif name: Motif 16
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 11
Similarity score: 0.0258838

Alignment:
TCAAAATKAWTTGT
HCAGAATGTHD---

Original motif     Consensus sequence: ACAAWTRATTTTGA Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT

Dataset #: 4
Motif ID: 41
Motif name: wwAAATAATAtw
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0292508

Alignment:
DDTATTATTTDH
-HCAGAATGTHD

Original motif     Consensus sequence: HDAAATAATADD Reverse complement motif     Consensus sequence: DDTATTATTTDH

Dataset #: 5
Motif ID: 56
Motif name: TFM11
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 11
Similarity score: 0.0307858

Alignment:
TWVHWWWYTTTYTTTTTHTTTVWBH
----DHACATTCTGH----------

Original motif     Consensus sequence: HDWVAAAHAAAAAMAAAMWWWHBWA Reverse complement motif     Consensus sequence: TWVHWWWYTTTYTTTTTHTTTVWBH

Dataset #: 5
Motif ID: 55
Motif name: TFM13
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 9
Number of overlap: 11
Similarity score: 0.0357323

Alignment:
ATKAAWTTTTRMAABAHHTW
-DHACATTCTGH--------

Original motif     Consensus sequence: ATKAAWTTTTRMAABAHHTW Reverse complement motif     Consensus sequence: WAHHTVTTYKAAAAWTTRAT

Dataset #: 4
Motif ID: 37
Motif name: tkAAATAATAtw
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.0364899

Alignment:
WHTATTATTTDH
-HCAGAATGTHD

Original motif     Consensus sequence: HDAAATAATAHW Reverse complement motif     Consensus sequence: WHTATTATTTDH

Dataset #: 2
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 11
Similarity score: 0.0400884

Alignment:
AATTYDGAARTAWW
HCAGAATGTHD---

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

Dataset #: 4
Motif ID: 39
Motif name: kCAGCCAATmr
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0412582

Alignment:
MBATTGGCTGH
DHACATTCTGH

Original motif     Consensus sequence: DCAGCCAATVR Reverse complement motif     Consensus sequence: MBATTGGCTGH

Dataset #: 3
Motif ID: 35
Motif name: GABPA
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0418896

Alignment:
CCGGAAGTGVV
HCAGAATGTHD

Original motif     Consensus sequence: CCGGAAGTGVV Reverse complement motif     Consensus sequence: VVCACTTCCGG

Dataset #: 4 Motif ID: 45 Motif name: wbgTAAATAww

Original motif     Consensus sequence: DBGTAAATAHD Reverse complement motif     Consensus sequence: DHTATTTACBD

Best Matches for Motif ID 45 (Highest to Lowest)

Dataset #: 4
Motif ID: 37
Motif name: tkAAATAATAtw
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0162338

Alignment:
HDAAATAATAHW
-DBGTAAATAHD

Original motif     Consensus sequence: HDAAATAATAHW Reverse complement motif     Consensus sequence: WHTATTATTTDH

Dataset #: 4
Motif ID: 41
Motif name: wwAAATAATAtw
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.0164863

Alignment:
DDTATTATTTDH
DHTATTTACBD-

Original motif     Consensus sequence: HDAAATAATADD Reverse complement motif     Consensus sequence: DDTATTATTTDH

Dataset #: 5
Motif ID: 56
Motif name: TFM11
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 15
Number of overlap: 11
Similarity score: 0.0192768

Alignment:
TWVHWWWYTTTYTTTTTHTTTVWBH
--------------DHTATTTACBD

Original motif     Consensus sequence: HDWVAAAHAAAAAMAAAMWWWHBWA Reverse complement motif     Consensus sequence: TWVHWWWYTTTYTTTTTHTTTVWBH

Dataset #: 2
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 11
Similarity score: 0.0250541

Alignment:
AATHATATWTHAAA
DHTATTTACBD---

Original motif     Consensus sequence: AATHATATWTHAAA Reverse complement motif     Consensus sequence: TTTDAWATATHATT

Dataset #: 2
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.027895

Alignment:
AATTYDGAARTAWW
---DBGTAAATAHD

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

Dataset #: 5
Motif ID: 52
Motif name: TFM1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0283217

Alignment:
ABAAAAAAWHAAAAARAW
DBGTAAATAHD-------

Original motif     Consensus sequence: WTKTTTTTHWTTTTTTBT Reverse complement motif     Consensus sequence: ABAAAAAAWHAAAAARAW

Dataset #: 5
Motif ID: 53
Motif name: TFM3
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.0308097

Alignment:
TWAAWTTVTGAAAAAHWW
------DBGTAAATAHD-

Original motif     Consensus sequence: WWHTTTTTCABAAWTTWA Reverse complement motif     Consensus sequence: TWAAWTTVTGAAAAAHWW

Dataset #: 5
Motif ID: 55
Motif name: TFM13
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 11
Similarity score: 0.0333874

Alignment:
ATKAAWTTTTRMAABAHHTW
-------DBGTAAATAHD--

Original motif     Consensus sequence: ATKAAWTTTTRMAABAHHTW Reverse complement motif     Consensus sequence: WAHHTVTTYKAAAAWTTRAT

Dataset #: 2
Motif ID: 4
Motif name: Motif 4
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0361187

Alignment:
AWGKAAWTTTT
DBGTAAATAHD

Original motif     Consensus sequence: AAAAWTTRCWT Reverse complement motif     Consensus sequence: AWGKAAWTTTT

Dataset #: 2
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.0410381

Alignment:
AWAAAWTWAAASWA
--DHTATTTACBD-

Original motif     Consensus sequence: AWAAAWTWAAASWA Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

Dataset #: 5 Motif ID: 46 Motif name: TFW1

Original motif     Consensus sequence: GTCGCG Reverse complement motif     Consensus sequence: CGCGAC

Best Matches for Motif ID 46 (Highest to Lowest)

Dataset #: 5
Motif ID: 48
Motif name: TFW3
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.0350356

Alignment:
CGGCYBCGCG
----GTCGCG

Original motif     Consensus sequence: CGGCYBCGCG Reverse complement motif     Consensus sequence: CGCGBMGCCG

Dataset #: 4
Motif ID: 42
Motif name: sSGTCACGTGACSs
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 7
Number of overlap: 6
Similarity score: 0.0375102

Alignment:
SGGTCACGTGACCS
--GTCGCG------

Original motif     Consensus sequence: SGGTCACGTGACCS Reverse complement motif     Consensus sequence: SGGTCACGTGACCS

Dataset #: 5
Motif ID: 50
Motif name: TFF11
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 6
Similarity score: 0.0381641

Alignment:
GCVCCGCCMCCYCC
----CGCGAC----

Original motif     Consensus sequence: GGMGGRGGCGGVGC Reverse complement motif     Consensus sequence: GCVCCGCCMCCYCC

Dataset #: 5
Motif ID: 49
Motif name: TFF1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 7
Number of overlap: 6
Similarity score: 0.0431161

Alignment:
CGGVGCCGCVGC
------CGCGAC

Original motif     Consensus sequence: CGGVGCCGCVGC Reverse complement motif     Consensus sequence: GCVGCGGCBCCG

Dataset #: 5
Motif ID: 47
Motif name: TFW2
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.052047

Alignment:
CCGCGCGS
-CGCGAC-

Original motif     Consensus sequence: SCGCGCGG Reverse complement motif     Consensus sequence: CCGCGCGS

Dataset #: 3
Motif ID: 33
Motif name: Mycn
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.0537993

Alignment:
GCCACGTGSD
----GTCGCG

Original motif     Consensus sequence: HSCACGTGGC Reverse complement motif     Consensus sequence: GCCACGTGSD

Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 7
Number of overlap: 6
Similarity score: 0.0539

Alignment:
HVGCCCCGCCCCBB
--GTCGCG------

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD

Dataset #: 1
Motif ID: 1
Motif name: Motif 1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 6
Similarity score: 0.0554263

Alignment:
GCCCCGCC
--GTCGCG

Original motif     Consensus sequence: GGCGGGGC Reverse complement motif     Consensus sequence: GCCCCGCC

Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.0558733

Alignment:
BBGGGGCGGGGCGGB
-------GTCGCG--

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB

Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 7
Number of overlap: 6
Similarity score: 0.0644512

Alignment:
CSKCCCCGCCCCSY
--CGCGAC------

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG

Dataset #: 5 Motif ID: 47 Motif name: TFW2

Original motif     Consensus sequence: SCGCGCGG Reverse complement motif     Consensus sequence: CCGCGCGS

Best Matches for Motif ID 47 (Highest to Lowest)

Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 6
Number of overlap: 8
Similarity score: 0.0456233

Alignment:
HVGCCCCGCCCCBB
-CCGCGCGS-----

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD

Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 7
Number of overlap: 8
Similarity score: 0.045686

Alignment:
BBGGGGCGGGGCGGB
------SCGCGCGG-

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB

Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 6
Number of overlap: 8
Similarity score: 0.0504058

Alignment:
CSKCCCCGCCCCSY
-CCGCGCGS-----

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG

Dataset #: 3
Motif ID: 33
Motif name: Mycn
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0527532

Alignment:
HSCACGTGGC
-SCGCGCGG-

Original motif     Consensus sequence: HSCACGTGGC Reverse complement motif     Consensus sequence: GCCACGTGSD

Dataset #: 3
Motif ID: 34
Motif name: Myc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0574543

Alignment:
VGCACGTGGH
-SCGCGCGG-

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV

Dataset #: 5
Motif ID: 50
Motif name: TFF11
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0583967

Alignment:
GCVCCGCCMCCYCC
---CCGCGCGS---

Original motif     Consensus sequence: GGMGGRGGCGGVGC Reverse complement motif     Consensus sequence: GCVCCGCCMCCYCC

Dataset #: 5
Motif ID: 49
Motif name: TFF1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 8
Similarity score: 0.060966

Alignment:
CGGVGCCGCVGC
SCGCGCGG----

Original motif     Consensus sequence: CGGVGCCGCVGC Reverse complement motif     Consensus sequence: GCVGCGGCBCCG

Dataset #: 3
Motif ID: 25
Motif name: TFAP2A
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0678925

Alignment:
SCMVBBGGC
-SCGCGCGG

Original motif     Consensus sequence: GCCBBVRGS Reverse complement motif     Consensus sequence: SCMVBBGGC

Dataset #: 3
Motif ID: 24
Motif name: SP1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.07018

Alignment:
GGGGGYGGGG
SCGCGCGG--

Original motif     Consensus sequence: CCCCKCCCCC Reverse complement motif     Consensus sequence: GGGGGYGGGG

Dataset #: 3
Motif ID: 22
Motif name: Zfx
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0710499

Alignment:
BBVGCCBVGGCCTV
--SCGCGCGG----

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB

Dataset #: 5 Motif ID: 48 Motif name: TFW3

Original motif     Consensus sequence: CGGCYBCGCG Reverse complement motif     Consensus sequence: CGCGBMGCCG

Best Matches for Motif ID 48 (Highest to Lowest)

Dataset #: 5
Motif ID: 49
Motif name: TFF1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 10
Similarity score: 0.0623879

Alignment:
CGGVGCCGCVGC
CGGCYBCGCG--

Original motif     Consensus sequence: CGGVGCCGCVGC Reverse complement motif     Consensus sequence: GCVGCGGCBCCG

Dataset #: 3
Motif ID: 23
Motif name: Egr1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.0630189

Alignment:
YCGCCCACGCH
CGGCYBCGCG-

Original motif     Consensus sequence: HGCGTGGGCGK Reverse complement motif     Consensus sequence: YCGCCCACGCH

Dataset #: 5
Motif ID: 50
Motif name: TFF11
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0645308

Alignment:
GGMGGRGGCGGVGC
CGCGBMGCCG----

Original motif     Consensus sequence: GGMGGRGGCGGVGC Reverse complement motif     Consensus sequence: GCVCCGCCMCCYCC

Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 11
Number of overlap: 10
Similarity score: 0.0714355

Alignment:
MSGKKRCGCWDCABTGBBCD
----------CGGCYBCGCG

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD

Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0717594

Alignment:
CSKCCCCGCCCCSY
CGGCYBCGCG----

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG

Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 10
Similarity score: 0.0718771

Alignment:
HVGCCCCGCCCCBB
CGGCYBCGCG----

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD

Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 10
Similarity score: 0.0719604

Alignment:
BCCGCCCCGCCCCBB
-CGGCYBCGCG----

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB

Dataset #: 3
Motif ID: 22
Motif name: Zfx
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 10
Similarity score: 0.0766755

Alignment:
VAGGCCBBGGCVBB
--CGGCYBCGCG--

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB

Dataset #: 5
Motif ID: 54
Motif name: TFM12
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0767689

Alignment:
KKKAGGDGGAKKMGBBGKMG
----------CGCGBMGCCG

Original motif     Consensus sequence: CYYCBBCYYYTCCHCCTYYY Reverse complement motif     Consensus sequence: KKKAGGDGGAKKMGBBGKMG

Dataset #: 5
Motif ID: 51
Motif name: TFM2
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 7
Number of overlap: 10
Similarity score: 0.0814831

Alignment:
CHCCBCCKMCTCCKCM
CGGCYBCGCG------

Original motif     Consensus sequence: RGRGGAGRRGGHGGDG Reverse complement motif     Consensus sequence: CHCCBCCKMCTCCKCM

Dataset #: 5 Motif ID: 49 Motif name: TFF1

Original motif     Consensus sequence: CGGVGCCGCVGC Reverse complement motif     Consensus sequence: GCVGCGGCBCCG

Best Matches for Motif ID 49 (Highest to Lowest)

Dataset #: 5
Motif ID: 50
Motif name: TFF11
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.0292081

Alignment:
GGMGGRGGCGGVGC
--CGGVGCCGCVGC

Original motif     Consensus sequence: GGMGGRGGCGGVGC Reverse complement motif     Consensus sequence: GCVCCGCCMCCYCC

Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.0542674

Alignment:
HVGCCCCGCCCCBB
CGGVGCCGCVGC--

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD

Dataset #: 5
Motif ID: 54
Motif name: TFM12
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 7
Number of overlap: 12
Similarity score: 0.0543272

Alignment:
KKKAGGDGGAKKMGBBGKMG
------CGGVGCCGCVGC--

Original motif     Consensus sequence: CYYCBBCYYYTCCHCCTYYY Reverse complement motif     Consensus sequence: KKKAGGDGGAKKMGBBGKMG

Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 12
Similarity score: 0.0548371

Alignment:
BBGGGGCGGGGCGGB
---CGGVGCCGCVGC

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB

Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.0556962

Alignment:
DGVBCABTGDWGCGKRRCSR
GCVGCGGCBCCG--------

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD

Dataset #: 5
Motif ID: 51
Motif name: TFM2
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 12
Similarity score: 0.0594165

Alignment:
CHCCBCCKMCTCCKCM
--GCVGCGGCBCCG--

Original motif     Consensus sequence: RGRGGAGRRGGHGGDG Reverse complement motif     Consensus sequence: CHCCBCCKMCTCCKCM

Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.0624366

Alignment:
CSKCCCCGCCCCSY
GCVGCGGCBCCG--

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG

Dataset #: 4
Motif ID: 42
Motif name: sSGTCACGTGACSs
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.0777862

Alignment:
SGGTCACGTGACCS
--CGGVGCCGCVGC

Original motif     Consensus sequence: SGGTCACGTGACCS Reverse complement motif     Consensus sequence: SGGTCACGTGACCS

Dataset #: 3
Motif ID: 22
Motif name: Zfx
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 12
Similarity score: 0.0779228

Alignment:
BBVGCCBVGGCCTV
-GCVGCGGCBCCG-

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB

Dataset #: 3
Motif ID: 30
Motif name: PLAG1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.0809608

Alignment:
GGGGCCCAAGGGGG
CGGVGCCGCVGC--

Original motif     Consensus sequence: GGGGCCCAAGGGGG Reverse complement motif     Consensus sequence: CCCCCTTGGGCCCC

Dataset #: 5 Motif ID: 50 Motif name: TFF11

Original motif     Consensus sequence: GGMGGRGGCGGVGC Reverse complement motif     Consensus sequence: GCVCCGCCMCCYCC

Best Matches for Motif ID 50 (Highest to Lowest)

Dataset #: 5
Motif ID: 51
Motif name: TFM2
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 14
Similarity score: 0.033716

Alignment:
RGRGGAGRRGGHGGDG
GGMGGRGGCGGVGC--

Original motif     Consensus sequence: RGRGGAGRRGGHGGDG Reverse complement motif     Consensus sequence: CHCCBCCKMCTCCKCM

Dataset #: 5
Motif ID: 54
Motif name: TFM12
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 6
Number of overlap: 14
Similarity score: 0.0386905

Alignment:
CYYCBBCYYYTCCHCCTYYY
-----GCVCCGCCMCCYCC-

Original motif     Consensus sequence: CYYCBBCYYYTCCHCCTYYY Reverse complement motif     Consensus sequence: KKKAGGDGGAKKMGBBGKMG

Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 14
Similarity score: 0.0548198

Alignment:
BBGGGGCGGGGCGGB
GGMGGRGGCGGVGC-

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB

Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 14
Similarity score: 0.0573129

Alignment:
DGVBCABTGDWGCGKRRCSR
----GGMGGRGGCGGVGC--

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD

Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0652173

Alignment:
BBGGGGCGGGGCVD
GGMGGRGGCGGVGC

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD

Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0661275

Alignment:
MSGGGGCGGGGYSG
GGMGGRGGCGGVGC

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG

Dataset #: 2
Motif ID: 2
Motif name: Motif 2
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0714286

Alignment:
RGRAGARRGARRAR
GGMGGRGGCGGVGC

Original motif     Consensus sequence: RGRAGARRGARRAR Reverse complement motif     Consensus sequence: MTMMTCMMTCTKCK

Dataset #: 3
Motif ID: 30
Motif name: PLAG1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 13
Similarity score: 0.574939

Alignment:
-CCCCCTTGGGCCCC
GCVCCGCCMCCYCC-

Original motif     Consensus sequence: GGGGCCCAAGGGGG Reverse complement motif     Consensus sequence: CCCCCTTGGGCCCC

Dataset #: 3
Motif ID: 22
Motif name: Zfx
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 13
Similarity score: 0.577861

Alignment:
VAGGCCBBGGCVBB-
-GGMGGRGGCGGVGC

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB

Dataset #: 5
Motif ID: 49
Motif name: TFF1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 1.02659

Alignment:
--CGGVGCCGCVGC
GGMGGRGGCGGVGC

Original motif     Consensus sequence: CGGVGCCGCVGC Reverse complement motif     Consensus sequence: GCVGCGGCBCCG

Dataset #: 5 Motif ID: 51 Motif name: TFM2

Original motif     Consensus sequence: RGRGGAGRRGGHGGDG Reverse complement motif     Consensus sequence: CHCCBCCKMCTCCKCM

Best Matches for Motif ID 51 (Highest to Lowest)

Dataset #: 5
Motif ID: 54
Motif name: TFM12
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 16
Similarity score: 0.0331473

Alignment:
CYYCBBCYYYTCCHCCTYYY
CHCCBCCKMCTCCKCM----

Original motif     Consensus sequence: CYYCBBCYYYTCCHCCTYYY Reverse complement motif     Consensus sequence: KKKAGGDGGAKKMGBBGKMG

Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 16
Similarity score: 0.0668155

Alignment:
DGVBCABTGDWGCGKRRCSR
-RGRGGAGRRGGHGGDG---

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD

Dataset #: 5
Motif ID: 56
Motif name: TFM11
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 8
Number of overlap: 16
Similarity score: 0.0794752

Alignment:
HDWVAAAHAAAAAMAAAMWWWHBWA
-------RGRGGAGRRGGHGGDG--

Original motif     Consensus sequence: HDWVAAAHAAAAAMAAAMWWWHBWA Reverse complement motif     Consensus sequence: TWVHWWWYTTTYTTTTTHTTTVWBH

Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 15
Similarity score: 0.558405

Alignment:
BCCGCCCCGCCCCBB-
CHCCBCCKMCTCCKCM

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB

Dataset #: 2
Motif ID: 2
Motif name: Motif 2
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 1.01195

Alignment:
--RGRAGARRGARRAR
RGRGGAGRRGGHGGDG

Original motif     Consensus sequence: RGRAGARRGARRAR Reverse complement motif     Consensus sequence: MTMMTCMMTCTKCK

Dataset #: 5
Motif ID: 50
Motif name: TFF11
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 1.03372

Alignment:
GGMGGRGGCGGVGC--
RGRGGAGRRGGHGGDG

Original motif     Consensus sequence: GGMGGRGGCGGVGC Reverse complement motif     Consensus sequence: GCVCCGCCMCCYCC

Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 1.05908

Alignment:
MSGGGGCGGGGYSG--
RGRGGAGRRGGHGGDG

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG

Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 1.05955

Alignment:
HVGCCCCGCCCCBB--
CHCCBCCKMCTCCKCM

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD

Dataset #: 3
Motif ID: 30
Motif name: PLAG1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 1.07365

Alignment:
--CCCCCTTGGGCCCC
CHCCBCCKMCTCCKCM

Original motif     Consensus sequence: GGGGCCCAAGGGGG Reverse complement motif     Consensus sequence: CCCCCTTGGGCCCC

Dataset #: 3
Motif ID: 22
Motif name: Zfx
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 12
Similarity score: 2.06908

Alignment:
VAGGCCBBGGCVBB----
--RGRGGAGRRGGHGGDG

Original motif     Consensus sequence: BBVGCCBVGGCCTV Reverse complement motif     Consensus sequence: VAGGCCBBGGCVBB

Dataset #: 5 Motif ID: 52 Motif name: TFM1

Original motif     Consensus sequence: WTKTTTTTHWTTTTTTBT Reverse complement motif     Consensus sequence: ABAAAAAAWHAAAAARAW

Best Matches for Motif ID 52 (Highest to Lowest)

Dataset #: 5
Motif ID: 56
Motif name: TFM11
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 6
Number of overlap: 18
Similarity score: 0

Alignment:
TWVHWWWYTTTYTTTTTHTTTVWBH
-----WTKTTTTTHWTTTTTTBT--

Original motif     Consensus sequence: HDWVAAAHAAAAAMAAAMWWWHBWA Reverse complement motif     Consensus sequence: TWVHWWWYTTTYTTTTTHTTTVWBH

Dataset #: 5
Motif ID: 55
Motif name: TFM13
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 18
Similarity score: 0.0364672

Alignment:
ATKAAWTTTTRMAABAHHTW
ABAAAAAAWHAAAAARAW--

Original motif     Consensus sequence: ATKAAWTTTTRMAABAHHTW Reverse complement motif     Consensus sequence: WAHHTVTTYKAAAAWTTRAT

Dataset #: 5
Motif ID: 53
Motif name: TFM3
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 18
Similarity score: 0.0456974

Alignment:
WWHTTTTTCABAAWTTWA
WTKTTTTTHWTTTTTTBT

Original motif     Consensus sequence: WWHTTTTTCABAAWTTWA Reverse complement motif     Consensus sequence: TWAAWTTVTGAAAAAHWW

Dataset #: 5
Motif ID: 54
Motif name: TFM12
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 17
Similarity score: 0.572783

Alignment:
CYYCBBCYYYTCCHCCTYYY-
---WTKTTTTTHWTTTTTTBT

Original motif     Consensus sequence: CYYCBBCYYYTCCHCCTYYY Reverse complement motif     Consensus sequence: KKKAGGDGGAKKMGBBGKMG

Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 5
Number of overlap: 16
Similarity score: 1.07322

Alignment:
--MSGKKRCGCWDCABTGBBCD
WTKTTTTTHWTTTTTTBT----

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD

Dataset #: 2
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 2.01877

Alignment:
----TWSTTTWAWTTTWT
WTKTTTTTHWTTTTTTBT

Original motif     Consensus sequence: AWAAAWTWAAASWA Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

Dataset #: 2
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 2.05025

Alignment:
----AATHATATWTHAAA
ABAAAAAAWHAAAAARAW

Original motif     Consensus sequence: AATHATATWTHAAA Reverse complement motif     Consensus sequence: TTTDAWATATHATT

Dataset #: 2
Motif ID: 2
Motif name: Motif 2
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 2.05187

Alignment:
MTMMTCMMTCTKCK----
WTKTTTTTHWTTTTTTBT

Original motif     Consensus sequence: RGRAGARRGARRAR Reverse complement motif     Consensus sequence: MTMMTCMMTCTKCK

Dataset #: 2
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 2.0566

Alignment:
AATTYDGAARTAWW----
ABAAAAAAWHAAAAARAW

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

Dataset #: 2
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 2.07166

Alignment:
AAATRWTAAAATCA----
ABAAAAAAWHAAAAARAW

Original motif     Consensus sequence: AAATRWTAAAATCA Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

Dataset #: 5 Motif ID: 53 Motif name: TFM3

Original motif     Consensus sequence: WWHTTTTTCABAAWTTWA Reverse complement motif     Consensus sequence: TWAAWTTVTGAAAAAHWW

Best Matches for Motif ID 53 (Highest to Lowest)

Dataset #: 5
Motif ID: 55
Motif name: TFM13
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 18
Similarity score: 0.013876

Alignment:
ATKAAWTTTTRMAABAHHTW
-TWAAWTTVTGAAAAAHWW-

Original motif     Consensus sequence: ATKAAWTTTTRMAABAHHTW Reverse complement motif     Consensus sequence: WAHHTVTTYKAAAAWTTRAT

Dataset #: 5
Motif ID: 56
Motif name: TFM11
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 18
Similarity score: 0.0402327

Alignment:
TWVHWWWYTTTYTTTTTHTTTVWBH
----WWHTTTTTCABAAWTTWA---

Original motif     Consensus sequence: HDWVAAAHAAAAAMAAAMWWWHBWA Reverse complement motif     Consensus sequence: TWVHWWWYTTTYTTTTTHTTTVWBH

Dataset #: 5
Motif ID: 52
Motif name: TFM1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 18
Similarity score: 0.0432207

Alignment:
WTKTTTTTHWTTTTTTBT
WWHTTTTTCABAAWTTWA

Original motif     Consensus sequence: WTKTTTTTHWTTTTTTBT Reverse complement motif     Consensus sequence: ABAAAAAAWHAAAAARAW

Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 17
Similarity score: 0.561883

Alignment:
-MSGKKRCGCWDCABTGBBCD
WWHTTTTTCABAAWTTWA---

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD

Dataset #: 2
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 2.04564

Alignment:
----TWSTTTWAWTTTWT
WWHTTTTTCABAAWTTWA

Original motif     Consensus sequence: AWAAAWTWAAASWA Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

Dataset #: 2
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 2.04628

Alignment:
WWTAKTTCDKAATT----
TWAAWTTVTGAAAAAHWW

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

Dataset #: 2
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 2.04784

Alignment:
AATHATATWTHAAA----
WWHTTTTTCABAAWTTWA

Original motif     Consensus sequence: AATHATATWTHAAA Reverse complement motif     Consensus sequence: TTTDAWATATHATT

Dataset #: 2
Motif ID: 2
Motif name: Motif 2
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 13
Similarity score: 2.56928

Alignment:
-----RGRAGARRGARRAR
TWAAWTTVTGAAAAAHWW-

Original motif     Consensus sequence: RGRAGARRGARRAR Reverse complement motif     Consensus sequence: MTMMTCMMTCTKCK

Dataset #: 2
Motif ID: 19
Motif name: Motif 19
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 13
Similarity score: 2.56949

Alignment:
-----TWTAATCTAWGAA
WWHTTTTTCABAAWTTWA

Original motif     Consensus sequence: TTCWTAGATTAWA Reverse complement motif     Consensus sequence: TWTAATCTAWGAA

Dataset #: 4
Motif ID: 41
Motif name: wwAAATAATAtw
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 3.0422

Alignment:
------HDAAATAATADD
TWAAWTTVTGAAAAAHWW

Original motif     Consensus sequence: HDAAATAATADD Reverse complement motif     Consensus sequence: DDTATTATTTDH

Dataset #: 5 Motif ID: 54 Motif name: TFM12

Original motif     Consensus sequence: CYYCBBCYYYTCCHCCTYYY Reverse complement motif     Consensus sequence: KKKAGGDGGAKKMGBBGKMG

Best Matches for Motif ID 54 (Highest to Lowest)

Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.0458155

Alignment:
MSGKKRCGCWDCABTGBBCD
CYYCBBCYYYTCCHCCTYYY

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD

Dataset #: 5
Motif ID: 56
Motif name: TFM11
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 6
Number of overlap: 20
Similarity score: 0.0573204

Alignment:
TWVHWWWYTTTYTTTTTHTTTVWBH
CYYCBBCYYYTCCHCCTYYY-----

Original motif     Consensus sequence: HDWVAAAHAAAAAMAAAMWWWHBWA Reverse complement motif     Consensus sequence: TWVHWWWYTTTYTTTTTHTTTVWBH

Dataset #: 5
Motif ID: 52
Motif name: TFM1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 17
Similarity score: 1.56255

Alignment:
---WTKTTTTTHWTTTTTTBT
CYYCBBCYYYTCCHCCTYYY-

Original motif     Consensus sequence: WTKTTTTTHWTTTTTTBT Reverse complement motif     Consensus sequence: ABAAAAAAWHAAAAARAW

Dataset #: 5
Motif ID: 51
Motif name: TFM2
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 16
Similarity score: 2.01568

Alignment:
RGRGGAGRRGGHGGDG----
KKKAGGDGGAKKMGBBGKMG

Original motif     Consensus sequence: RGRGGAGRRGGHGGDG Reverse complement motif     Consensus sequence: CHCCBCCKMCTCCKCM

Dataset #: 4
Motif ID: 38
Motif name: cccGCCCCGCCCCsb
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 15
Similarity score: 2.55221

Alignment:
-----BCCGCCCCGCCCCBB
CYYCBBCYYYTCCHCCTYYY

Original motif     Consensus sequence: BCCGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCGGB

Dataset #: 2
Motif ID: 2
Motif name: Motif 2
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 3.0395

Alignment:
------RGRAGARRGARRAR
KKKAGGDGGAKKMGBBGKMG

Original motif     Consensus sequence: RGRAGARRGARRAR Reverse complement motif     Consensus sequence: MTMMTCMMTCTKCK

Dataset #: 2
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 3.04463

Alignment:
------CSKCCCCGCCCCSY
CYYCBBCYYYTCCHCCTYYY

Original motif     Consensus sequence: CSKCCCCGCCCCSY Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG

Dataset #: 4
Motif ID: 36
Motif name: csGCCCCGCCCCsc
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 3.05024

Alignment:
------BBGGGGCGGGGCVD
KKKAGGDGGAKKMGBBGKMG

Original motif     Consensus sequence: HVGCCCCGCCCCBB Reverse complement motif     Consensus sequence: BBGGGGCGGGGCVD

Dataset #: 5
Motif ID: 50
Motif name: TFF11
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 3.0542

Alignment:
GGMGGRGGCGGVGC------
KKKAGGDGGAKKMGBBGKMG

Original motif     Consensus sequence: GGMGGRGGCGGVGC Reverse complement motif     Consensus sequence: GCVCCGCCMCCYCC

Dataset #: 3
Motif ID: 30
Motif name: PLAG1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 3.06074

Alignment:
GGGGCCCAAGGGGG------
KKKAGGDGGAKKMGBBGKMG

Original motif     Consensus sequence: GGGGCCCAAGGGGG Reverse complement motif     Consensus sequence: CCCCCTTGGGCCCC

Dataset #: 5 Motif ID: 55 Motif name: TFM13

Original motif     Consensus sequence: ATKAAWTTTTRMAABAHHTW Reverse complement motif     Consensus sequence: WAHHTVTTYKAAAAWTTRAT

Best Matches for Motif ID 55 (Highest to Lowest)

Dataset #: 5
Motif ID: 56
Motif name: TFM11
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 20
Similarity score: 0.0352451

Alignment:
TWVHWWWYTTTYTTTTTHTTTVWBH
----WAHHTVTTYKAAAAWTTRAT-

Original motif     Consensus sequence: HDWVAAAHAAAAAMAAAMWWWHBWA Reverse complement motif     Consensus sequence: TWVHWWWYTTTYTTTTTHTTTVWBH

Dataset #: 5
Motif ID: 53
Motif name: TFM3
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 18
Similarity score: 1.02254

Alignment:
TWAAWTTVTGAAAAAHWW--
ATKAAWTTTTRMAABAHHTW

Original motif     Consensus sequence: WWHTTTTTCABAAWTTWA Reverse complement motif     Consensus sequence: TWAAWTTVTGAAAAAHWW

Dataset #: 5
Motif ID: 52
Motif name: TFM1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 18
Similarity score: 1.02868

Alignment:
WTKTTTTTHWTTTTTTBT--
WAHHTVTTYKAAAAWTTRAT

Original motif     Consensus sequence: WTKTTTTTHWTTTTTTBT Reverse complement motif     Consensus sequence: ABAAAAAAWHAAAAARAW

Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 6
Number of overlap: 15
Similarity score: 2.56565

Alignment:
-----MSGKKRCGCWDCABTGBBCD
WAHHTVTTYKAAAAWTTRAT-----

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD

Dataset #: 2
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 3.02278

Alignment:
------TTTDAWATATHATT
WAHHTVTTYKAAAAWTTRAT

Original motif     Consensus sequence: AATHATATWTHAAA Reverse complement motif     Consensus sequence: TTTDAWATATHATT

Dataset #: 2
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 3.04317

Alignment:
AWAAAWTWAAASWA------
ATKAAWTTTTRMAABAHHTW

Original motif     Consensus sequence: AWAAAWTWAAASWA Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

Dataset #: 2
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 3.05135

Alignment:
WWTAKTTCDKAATT------
WAHHTVTTYKAAAAWTTRAT

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

Dataset #: 2
Motif ID: 19
Motif name: Motif 19
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 13
Similarity score: 3.56273

Alignment:
TTCWTAGATTAWA-------
WAHHTVTTYKAAAAWTTRAT

Original motif     Consensus sequence: TTCWTAGATTAWA Reverse complement motif     Consensus sequence: TWTAATCTAWGAA

Dataset #: 2
Motif ID: 16
Motif name: Motif 16
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 13
Similarity score: 3.56529

Alignment:
-------ACAAWTRATTTTGA
WAHHTVTTYKAAAAWTTRAT-

Original motif     Consensus sequence: ACAAWTRATTTTGA Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT

Dataset #: 4
Motif ID: 37
Motif name: tkAAATAATAtw
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 4.03399

Alignment:
HDAAATAATAHW--------
WAHHTVTTYKAAAAWTTRAT

Original motif     Consensus sequence: HDAAATAATAHW Reverse complement motif     Consensus sequence: WHTATTATTTDH

Dataset #: 5 Motif ID: 56 Motif name: TFM11

Original motif     Consensus sequence: HDWVAAAHAAAAAMAAAMWWWHBWA Reverse complement motif     Consensus sequence: TWVHWWWYTTTYTTTTTHTTTVWBH

Best Matches for Motif ID 56 (Highest to Lowest)

Dataset #: 5
Motif ID: 55
Motif name: TFM13
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.0486765

Alignment:
WAHHTVTTYKAAAAWTTRAT-----
TWVHWWWYTTTYTTTTTHTTTVWBH

Original motif     Consensus sequence: ATKAAWTTTTRMAABAHHTW Reverse complement motif     Consensus sequence: WAHHTVTTYKAAAAWTTRAT

Dataset #: 5
Motif ID: 54
Motif name: TFM12
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.0693284

Alignment:
KKKAGGDGGAKKMGBBGKMG-----
HDWVAAAHAAAAAMAAAMWWWHBWA

Original motif     Consensus sequence: CYYCBBCYYYTCCHCCTYYY Reverse complement motif     Consensus sequence: KKKAGGDGGAKKMGBBGKMG

Dataset #: 3
Motif ID: 31
Motif name: Pax5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.0750613

Alignment:
DGVBCABTGDWGCGKRRCSR-----
HDWVAAAHAAAAAMAAAMWWWHBWA

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD

Dataset #: 5
Motif ID: 52
Motif name: TFM1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 18
Similarity score: 1.0232

Alignment:
-------ABAAAAAAWHAAAAARAW
HDWVAAAHAAAAAMAAAMWWWHBWA

Original motif     Consensus sequence: WTKTTTTTHWTTTTTTBT Reverse complement motif     Consensus sequence: ABAAAAAAWHAAAAARAW

Dataset #: 5
Motif ID: 53
Motif name: TFM3
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 18
Similarity score: 1.05388

Alignment:
WWHTTTTTCABAAWTTWA-------
TWVHWWWYTTTYTTTTTHTTTVWBH

Original motif     Consensus sequence: WWHTTTTTCABAAWTTWA Reverse complement motif     Consensus sequence: TWAAWTTVTGAAAAAHWW

Dataset #: 2
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 3.04236

Alignment:
TWSTTTWAWTTTWT-----------
TWVHWWWYTTTYTTTTTHTTTVWBH

Original motif     Consensus sequence: AWAAAWTWAAASWA Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

Dataset #: 2
Motif ID: 2
Motif name: Motif 2
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 3.05212

Alignment:
-----------RGRAGARRGARRAR
HDWVAAAHAAAAAMAAAMWWWHBWA

Original motif     Consensus sequence: RGRAGARRGARRAR Reverse complement motif     Consensus sequence: MTMMTCMMTCTKCK

Dataset #: 2
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 3.05326

Alignment:
AATHATATWTHAAA-----------
TWVHWWWYTTTYTTTTTHTTTVWBH

Original motif     Consensus sequence: AATHATATWTHAAA Reverse complement motif     Consensus sequence: TTTDAWATATHATT

Dataset #: 2
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 3.06919

Alignment:
WWTAKTTCDKAATT-----------
TWVHWWWYTTTYTTTTTHTTTVWBH

Original motif     Consensus sequence: AATTYDGAARTAWW Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

Dataset #: 4
Motif ID: 41
Motif name: wwAAATAATAtw
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 4.03464

Alignment:
HDAAATAATADD-------------
HDWVAAAHAAAAAMAAAMWWWHBWA

Original motif     Consensus sequence: HDAAATAATADD Reverse complement motif     Consensus sequence: DDTATTATTTDH

Results created by MOTIFSIM on 09-23-2015 12:50:42
Runtime: 75.0307 seconds.

MOTIFSIM is written by Ngoc Tam L. Tran
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