**************************************************************************************************************************************************************************************************** MOTIFSIM - Motif Similarity Detection Tool Version 2.0 **************************************************************************************************************************************************************************************************** INPUT **************************************************************************************************************************************************************************************************** Input Parameters Number of files: 2 Number of top significant motifs: 10 Number of best matches: 10 Similarity cutoff: >= 0.75 Output file type: All Output file format: All Input files and motif counts File name Count of motifs Dataset # MEME-CHIP_DM721.txt 11 1 PScanChIP_DM721.txt 37 2 **************************************************************************************************************************************************************************************************** RESULTS **************************************************************************************************************************************************************************************************** ****************************************************************** Top 10 Significant Motifs - Global Matching (Highest to Lowest) ****************************************************************** Dataset #: 1 Motif ID: 4 Motif name: Motif 4 Consensus sequence (original motif): CTCTGY Consensus sequence (reverse complement motif): KCAGAG *************************************************************** Best Matches for Top Significant Motif ID 4 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 43 NR1H2RXRA Reverse Complement Original Motif Backward 7 6 0.012269 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC -----KCAGAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 PPARGRXRA Reverse Complement Original Motif Forward 6 6 0.0140102 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA -----KCAGAG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 22 NR2F1 Reverse Complement Reverse Complement Backward 5 6 0.0186793 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: AKGYYCAAAGRTCA ----KCAGAG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 34 HNF4A Reverse Complement Original Motif Forward 4 6 0.020602 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: RGGBCAAAGKYCA ---KCAGAG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 37 MIZF Original Motif Original Motif Forward 5 6 0.0221665 Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV Alignment: BAACGTCCGC ----CTCTGY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 35 INSM1 Reverse Complement Original Motif Backward 5 6 0.0255256 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: TGYCAGGGGGCR --KCAGAG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 16 SP1 Original Motif Original Motif Backward 5 6 0.0349642 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: CCCCKCCCCC CTCTGY---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 REST Original Motif Reverse Complement Forward 3 6 0.0376108 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA --CTCTGY------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 12 Zfx Reverse Complement Original Motif Forward 4 6 0.0448449 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV ---KCAGAG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 29 ESR1 Reverse Complement Reverse Complement Forward 4 6 0.0454269 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV ---KCAGAG----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 5 Motif name: Motif 5 Consensus sequence (original motif): ATKTM Consensus sequence (reverse complement motif): RARAT *************************************************************** Best Matches for Top Significant Motif ID 5 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 RREB1 Reverse Complement Reverse Complement Backward 10 5 0.0256083 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: BGRRRGRGGRTGRTTYGGGG ------RARAT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 44 NR4A2 Reverse Complement Original Motif Backward 4 5 0.0276382 Consensus sequence (original motif): AAGGTCAC Consensus sequence (reverse complement motif): GTGACCTT Alignment: AAGGTCAC RARAT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 22 NR2F1 Reverse Complement Reverse Complement Backward 3 5 0.0279129 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: AKGYYCAAAGRTCA -------RARAT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 37 MIZF Original Motif Original Motif Backward 4 5 0.0292478 Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV Alignment: BAACGTCCGC --ATKTM--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 43 NR1H2RXRA Original Motif Original Motif Forward 10 5 0.0292478 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC ---------ATKTM--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 PPARGRXRA Original Motif Reverse Complement Forward 5 5 0.0305369 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: TGRCCTKTGHCCKAB ----ATKTM------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 REST Original Motif Reverse Complement Forward 5 5 0.0315454 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA ----ATKTM------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 47 RXRRAR_DR5 Original Motif Original Motif Backward 13 5 0.0335956 Consensus sequence (original motif): RGKTCABVVRGAGGTCA Consensus sequence (reverse complement motif): TGACCTCKVVBTGAYCK Alignment: RGKTCABVVRGAGGTCA ATKTM------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 46 RORA_1 Reverse Complement Original Motif Forward 4 5 0.0336052 Consensus sequence (original motif): AWVDAGGTCA Consensus sequence (reverse complement motif): TGACCTDVWT Alignment: AWVDAGGTCA ---RARAT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 34 HNF4A Original Motif Original Motif Backward 2 5 0.0367105 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: RGGBCAAAGKYCA -------ATKTM- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 6 Motif name: Motif 6 Consensus sequence (original motif): CMGCRGC Consensus sequence (reverse complement motif): GCKGCYG *************************************************************** Best Matches for Top Significant Motif ID 6 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 REST Original Motif Original Motif Backward 13 7 0.0205607 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC --CMGCRGC------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 37 MIZF Reverse Complement Reverse Complement Forward 1 7 0.0322623 Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV Alignment: GCGGACGTTV GCKGCYG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 12 Zfx Original Motif Original Motif Forward 5 7 0.038091 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV ----CMGCRGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 15 TFAP2A Original Motif Reverse Complement Forward 3 7 0.0393168 Consensus sequence (original motif): GCCBBVRGS Consensus sequence (reverse complement motif): SCMVBBGGC Alignment: SCMVBBGGC --CMGCRGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 45 Pax5 Reverse Complement Reverse Complement Backward 7 7 0.0448462 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD -------GCKGCYG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 28 Egr1 Reverse Complement Original Motif Backward 2 7 0.0453576 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: HGCGTGGGCGK ---GCKGCYG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 36 Klf4 Original Motif Reverse Complement Forward 2 7 0.0476958 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: GCCYCMCCCD -CMGCRGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 16 SP1 Reverse Complement Reverse Complement Forward 1 7 0.0490991 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: GGGGGYGGGG GCKGCYG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 RREB1 Reverse Complement Reverse Complement Forward 6 7 0.0498726 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: BGRRRGRGGRTGRTTYGGGG -----GCKGCYG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 35 INSM1 Original Motif Reverse Complement Backward 3 7 0.0511926 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: MGCCCCCTGMCA ---CMGCRGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 8 Motif name: Motif 8 Consensus sequence (original motif): CTGGGA Consensus sequence (reverse complement motif): TCCCAG *************************************************************** Best Matches for Top Significant Motif ID 8 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 REST Reverse Complement Reverse Complement Backward 9 6 0.0392549 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA -------TCCCAG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 23 MZF1_1-4 Reverse Complement Reverse Complement Forward 1 6 0.0416319 Consensus sequence (original motif): BGGGGA Consensus sequence (reverse complement motif): TCCCCV Alignment: TCCCCV TCCCAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 RREB1 Original Motif Reverse Complement Backward 1 6 0.0509122 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: BGRRRGRGGRTGRTTYGGGG --------------CTGGGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 35 INSM1 Original Motif Original Motif Forward 4 6 0.0557857 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: TGYCAGGGGGCR ---CTGGGA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 13 Zfp423 Reverse Complement Reverse Complement Backward 7 6 0.0624145 Consensus sequence (original motif): GSMMCCYARGGKKKC Consensus sequence (reverse complement motif): GYRYCCMTKGGYRSC Alignment: GYRYCCMTKGGYRSC ---TCCCAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 43 NR1H2RXRA Reverse Complement Original Motif Backward 7 6 0.0650784 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC -----TCCCAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 48 Tcfcp2l1 Original Motif Reverse Complement Backward 9 6 0.0663804 Consensus sequence (original motif): CCAGYYHVADCCRG Consensus sequence (reverse complement motif): CKGGDTBDMMCTGG Alignment: CKGGDTBDMMCTGG CTGGGA-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 28 Egr1 Reverse Complement Reverse Complement Forward 3 6 0.0678562 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: YCGCCCACGCH --TCCCAG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 24 Ar Reverse Complement Original Motif Backward 3 6 0.0714107 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: HWDAGHACRHHVTGTHCCHVMV --------------TCCCAG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 12 Zfx Original Motif Original Motif Backward 4 6 0.0718041 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV -----CTGGGA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 2 Motif name: Motif 2 Consensus sequence (original motif): AMACA Consensus sequence (reverse complement motif): TGTRT *************************************************************** Best Matches for Top Significant Motif ID 2 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 RREB1 Original Motif Original Motif Backward 11 5 0.0243918 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: CCCCMAAMCAMCCMCMMMCV -----AMACA---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 24 Ar Original Motif Original Motif Backward 14 5 0.0429089 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: HWDAGHACRHHVTGTHCCHVMV ----AMACA------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 PPARGRXRA Reverse Complement Reverse Complement Backward 6 5 0.0595073 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: TGRCCTKTGHCCKAB -----TGTRT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 26 ArntAhr Reverse Complement Original Motif Forward 1 5 0.0600161 Consensus sequence (original motif): YGCGTG Consensus sequence (reverse complement motif): CACGCM Alignment: YGCGTG TGTRT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 45 Pax5 Original Motif Reverse Complement Forward 6 5 0.0620995 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD -----AMACA---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 22 NR2F1 Original Motif Reverse Complement Backward 4 5 0.0650242 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: AKGYYCAAAGRTCA ------AMACA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 35 INSM1 Reverse Complement Original Motif Backward 8 5 0.0670984 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: TGYCAGGGGGCR TGTRT------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 33 HIF1AARNT Original Motif Reverse Complement Backward 4 5 0.0700905 Consensus sequence (original motif): VBACGTGV Consensus sequence (reverse complement motif): VCACGTBV Alignment: VCACGTBV AMACA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 38 Myc Original Motif Original Motif Backward 5 5 0.0708148 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: VGCACGTGGH -AMACA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 34 HNF4A Reverse Complement Reverse Complement Backward 4 5 0.071574 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: TGMYCTTTGBCCK -----TGTRT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 3 Motif name: Motif 3 Consensus sequence (original motif): AGSCWGG Consensus sequence (reverse complement motif): CCWGSCT *************************************************************** Best Matches for Top Significant Motif ID 3 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 32 EWSR1-FLI1 Original Motif Original Motif Forward 8 7 0.0395671 Consensus sequence (original motif): GGAAGGAAGGAAGGAAGG Consensus sequence (reverse complement motif): CCTTCCTTCCTTCCTTCC Alignment: GGAAGGAAGGAAGGAAGG -------AGSCWGG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 35 INSM1 Reverse Complement Reverse Complement Backward 1 7 0.0494688 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: MGCCCCCTGMCA -----CCWGSCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 48 Tcfcp2l1 Reverse Complement Original Motif Forward 1 7 0.0669354 Consensus sequence (original motif): CCAGYYHVADCCRG Consensus sequence (reverse complement motif): CKGGDTBDMMCTGG Alignment: CCAGYYHVADCCRG CCWGSCT------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 REST Original Motif Original Motif Backward 9 7 0.0693747 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC ------AGSCWGG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 16 SP1 Reverse Complement Original Motif Backward 3 7 0.0695377 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: CCCCKCCCCC -CCWGSCT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 12 Zfx Reverse Complement Original Motif Backward 2 7 0.0720685 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV ------CCWGSCT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 29 ESR1 Reverse Complement Reverse Complement Forward 13 7 0.0771405 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV ------------CCWGSCT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 46 RORA_1 Reverse Complement Reverse Complement Backward 1 7 0.0772276 Consensus sequence (original motif): AWVDAGGTCA Consensus sequence (reverse complement motif): TGACCTDVWT Alignment: TGACCTDVWT ---CCWGSCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 36 Klf4 Reverse Complement Reverse Complement Backward 1 7 0.0798994 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: GCCYCMCCCD ---CCWGSCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 39 MYCMAX Original Motif Original Motif Backward 5 7 0.0839075 Consensus sequence (original motif): RASCACGTGGT Consensus sequence (reverse complement motif): ACCACGTGSTM Alignment: RASCACGTGGT AGSCWGG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 1 Motif name: Motif 1 Consensus sequence (original motif): RGGAAR Consensus sequence (reverse complement motif): MTTCCK *************************************************************** Best Matches for Top Significant Motif ID 1 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 32 EWSR1-FLI1 Original Motif Original Motif Forward 12 6 0.0146511 Consensus sequence (original motif): GGAAGGAAGGAAGGAAGG Consensus sequence (reverse complement motif): CCTTCCTTCCTTCCTTCC Alignment: GGAAGGAAGGAAGGAAGG -----------RGGAAR- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 37 MIZF Reverse Complement Original Motif Forward 4 6 0.0608243 Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV Alignment: BAACGTCCGC ---MTTCCK- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 41 MZF1_5-13 Original Motif Original Motif Backward 1 6 0.0753789 Consensus sequence (original motif): BKAGGGGDAD Consensus sequence (reverse complement motif): BTHCCCCTYB Alignment: BKAGGGGDAD ----RGGAAR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 42 NFKB1 Original Motif Reverse Complement Forward 2 6 0.0757695 Consensus sequence (original motif): GGGGRTTCCCC Consensus sequence (reverse complement motif): GGGGAAKCCCC Alignment: GGGGAAKCCCC -RGGAAR---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 PPARGRXRA Original Motif Original Motif Backward 7 6 0.0800484 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA ---RGGAAR------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 REST Original Motif Original Motif Backward 6 6 0.0829223 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC ----------RGGAAR----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 35 INSM1 Original Motif Original Motif Forward 7 6 0.0832926 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: TGYCAGGGGGCR ------RGGAAR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 RREB1 Original Motif Reverse Complement Forward 5 6 0.0835516 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: BGRRRGRGGRTGRTTYGGGG ----RGGAAR---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 24 Ar Original Motif Original Motif Forward 4 6 0.0836451 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: HWDAGHACRHHVTGTHCCHVMV ---RGGAAR------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 27 E2F1 Original Motif Reverse Complement Backward 1 6 0.0842331 Consensus sequence (original motif): TTTSGCGC Consensus sequence (reverse complement motif): GCGCSAAA Alignment: GCGCSAAA --RGGAAR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 13 Zfp423 Original Motif Reverse Complement Backward 2 6 0.0850287 Consensus sequence (original motif): GSMMCCYARGGKKKC Consensus sequence (reverse complement motif): GYRYCCMTKGGYRSC Alignment: GYRYCCMTKGGYRSC --------RGGAAR- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 7 Motif name: Motif 7 Consensus sequence (original motif): CCCRCCCC Consensus sequence (reverse complement motif): GGGGMGGG *************************************************************** Best Matches for Top Significant Motif ID 7 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 16 SP1 Original Motif Original Motif Backward 2 8 0.0423611 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: CCCCKCCCCC -CCCRCCCC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 36 Klf4 Reverse Complement Original Motif Forward 1 8 0.0461644 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: DGGGYGKGGC GGGGMGGG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 28 Egr1 Original Motif Reverse Complement Forward 4 8 0.0650374 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: YCGCCCACGCH ---CCCRCCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 RREB1 Original Motif Original Motif Forward 2 8 0.076401 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: CCCCMAAMCAMCCMCMMMCV -CCCRCCCC----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 42 NFKB1 Reverse Complement Reverse Complement Forward 1 8 0.0893429 Consensus sequence (original motif): GGGGRTTCCCC Consensus sequence (reverse complement motif): GGGGAAKCCCC Alignment: GGGGAAKCCCC GGGGMGGG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 35 INSM1 Reverse Complement Original Motif Forward 1 8 0.0936832 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: TGYCAGGGGGCR GGGGMGGG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 32 EWSR1-FLI1 Reverse Complement Original Motif Backward 5 8 0.0950969 Consensus sequence (original motif): GGAAGGAAGGAAGGAAGG Consensus sequence (reverse complement motif): CCTTCCTTCCTTCCTTCC Alignment: GGAAGGAAGGAAGGAAGG ------GGGGMGGG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 21 PLAG1 Reverse Complement Original Motif Forward 1 8 0.0998932 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: GGGGCCCAAGGGGG GGGGMGGG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 12 Zfx Original Motif Original Motif Forward 5 8 0.10221 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV ----CCCRCCCC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 45 Pax5 Reverse Complement Original Motif Backward 5 8 0.102497 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR --------GGGGMGGG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 26 Motif name: ArntAhr Consensus sequence (original motif): YGCGTG Consensus sequence (reverse complement motif): CACGCM *************************************************************** Best Matches for Top Significant Motif ID 26 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 11 Motif 11 Original Motif Reverse Complement Forward 7 6 0.0308396 Consensus sequence (original motif): CAYACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTKTG Alignment: TGTGTGTGTGTKTG ------YGCGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 9 Motif 9 Reverse Complement Original Motif Backward 1 6 0.0350575 Consensus sequence (original motif): CACACAVRCACACA Consensus sequence (reverse complement motif): TGTGTGKVTGTGTG Alignment: CACACAVRCACACA --------CACGCM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 7 Motif 7 Original Motif Reverse Complement Backward 3 6 0.0586538 Consensus sequence (original motif): CCCRCCCC Consensus sequence (reverse complement motif): GGGGMGGG Alignment: GGGGMGGG YGCGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 3 Motif 3 Reverse Complement Reverse Complement Forward 2 6 0.0884818 Consensus sequence (original motif): AGSCWGG Consensus sequence (reverse complement motif): CCWGSCT Alignment: CCWGSCT -CACGCM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 2 Motif 2 Reverse Complement Original Motif Forward 1 5 0.563057 Consensus sequence (original motif): AMACA Consensus sequence (reverse complement motif): TGTRT Alignment: AMACA- CACGCM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 6 Motif 6 Original Motif Reverse Complement Backward 3 5 0.572774 Consensus sequence (original motif): CMGCRGC Consensus sequence (reverse complement motif): GCKGCYG Alignment: -GCKGCYG YGCGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 8 Motif 8 Reverse Complement Reverse Complement Backward 2 5 0.581904 Consensus sequence (original motif): CTGGGA Consensus sequence (reverse complement motif): TCCCAG Alignment: -TCCCAG CACGCM- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 4 Motif 4 Original Motif Reverse Complement Backward 3 4 1.06919 Consensus sequence (original motif): CTCTGY Consensus sequence (reverse complement motif): KCAGAG Alignment: --KCAGAG YGCGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 33 Motif name: HIF1AARNT Consensus sequence (original motif): VBACGTGV Consensus sequence (reverse complement motif): VCACGTBV *************************************************************** Best Matches for Top Significant Motif ID 33 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 9 Motif 9 Reverse Complement Original Motif Backward 2 8 0.0745994 Consensus sequence (original motif): CACACAVRCACACA Consensus sequence (reverse complement motif): TGTGTGKVTGTGTG Alignment: CACACAVRCACACA -----VCACGTBV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 11 Motif 11 Reverse Complement Original Motif Forward 4 8 0.0850889 Consensus sequence (original motif): CAYACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTKTG Alignment: CAYACACACACACA ---VCACGTBV--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 7 Motif 7 Reverse Complement Original Motif Forward 2 7 0.588622 Consensus sequence (original motif): CCCRCCCC Consensus sequence (reverse complement motif): GGGGMGGG Alignment: CCCRCCCC- -VCACGTBV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 3 Motif 3 Reverse Complement Original Motif Backward 3 5 1.55675 Consensus sequence (original motif): AGSCWGG Consensus sequence (reverse complement motif): CCWGSCT Alignment: ---AGSCWGG VCACGTBV-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 2 Motif 2 Original Motif Reverse Complement Forward 1 5 1.57238 Consensus sequence (original motif): AMACA Consensus sequence (reverse complement motif): TGTRT Alignment: TGTRT--- VBACGTGV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- **************************************************************************************************************************************************************************************************** **************************************************************** Significant Motifs - Global and Local Matching (Highest to Lowest) **************************************************************** Dataset #: 2 Motif ID: 14 Motif name: ZEB1 Consensus sequence (original motif): CACCTD Consensus sequence (reverse complement motif): HAGGTG ************************************************************** Best Matches for Significant Motif ID 14 (Highest to Lowest) ************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 46 RORA_1 Original Motif Reverse Complement Backward 4 6 0.0141289 Consensus sequence (original motif): AWVDAGGTCA Consensus sequence (reverse complement motif): TGACCTDVWT Alignment: TGACCTDVWT -CACCTD--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 REST Reverse Complement Reverse Complement Backward 6 6 0.0143133 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA ----------HAGGTG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 31 Esrrb Original Motif Reverse Complement Backward 1 6 0.0207244 Consensus sequence (original motif): CACGTG Consensus sequence (reverse complement motif): CACGTG Alignment: CACGTG CACCTD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 25 Arnt Reverse Complement Original Motif Forward 1 6 0.0207244 Consensus sequence (original motif): CACGTG Consensus sequence (reverse complement motif): CACGTG Alignment: CACGTG HAGGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 43 NR1H2RXRA Original Motif Reverse Complement Backward 2 6 0.0232753 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: GTTGACCTTTGACCTTT ----------CACCTD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 33 HIF1AARNT Original Motif Reverse Complement Backward 2 6 0.0237889 Consensus sequence (original motif): VBACGTGV Consensus sequence (reverse complement motif): VCACGTBV Alignment: VCACGTBV -CACCTD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 35 INSM1 Reverse Complement Original Motif Backward 4 6 0.0262123 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: TGYCAGGGGGCR ---HAGGTG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 PPARGRXRA Original Motif Reverse Complement Backward 9 6 0.0264837 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: TGRCCTKTGHCCKAB -CACCTD-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 39 MYCMAX Original Motif Reverse Complement Backward 4 6 0.0269744 Consensus sequence (original motif): RASCACGTGGT Consensus sequence (reverse complement motif): ACCACGTGSTM Alignment: ACCACGTGSTM --CACCTD--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 44 NR4A2 Original Motif Reverse Complement Backward 1 6 0.0288897 Consensus sequence (original motif): AAGGTCAC Consensus sequence (reverse complement motif): GTGACCTT Alignment: GTGACCTT --CACCTD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 4 Motif name: Motif 4 Consensus sequence (original motif): CTCTGY Consensus sequence (reverse complement motif): KCAGAG ************************************************************** Best Matches for Significant Motif ID 4 (Highest to Lowest) ************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 43 NR1H2RXRA Reverse Complement Original Motif Forward 6 6 0.012269 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC -----KCAGAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 PPARGRXRA Reverse Complement Original Motif Forward 6 6 0.0140102 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA -----KCAGAG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 22 NR2F1 Reverse Complement Reverse Complement Forward 5 6 0.0186793 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: AKGYYCAAAGRTCA ----KCAGAG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 34 HNF4A Reverse Complement Original Motif Forward 4 6 0.020602 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: RGGBCAAAGKYCA ---KCAGAG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 37 MIZF Original Motif Original Motif Forward 5 6 0.0221665 Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV Alignment: BAACGTCCGC ----CTCTGY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 35 INSM1 Reverse Complement Original Motif Forward 3 6 0.0255256 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: TGYCAGGGGGCR --KCAGAG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 16 SP1 Original Motif Original Motif Backward 5 6 0.0349642 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: CCCCKCCCCC CTCTGY---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 REST Original Motif Reverse Complement Backward 14 6 0.0376108 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA --CTCTGY------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 8 Motif 8 Reverse Complement Reverse Complement Backward 1 6 0.0446026 Consensus sequence (original motif): CTGGGA Consensus sequence (reverse complement motif): TCCCAG Alignment: TCCCAG KCAGAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 12 Zfx Reverse Complement Original Motif Forward 4 6 0.0448449 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV ---KCAGAG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 5 Motif name: Motif 5 Consensus sequence (original motif): ATKTM Consensus sequence (reverse complement motif): RARAT ************************************************************** Best Matches for Significant Motif ID 5 (Highest to Lowest) ************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 RREB1 Reverse Complement Reverse Complement Backward 10 5 0.0256083 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: BGRRRGRGGRTGRTTYGGGG ------RARAT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 10 Motif 10 Reverse Complement Reverse Complement Forward 2 5 0.0260117 Consensus sequence (original motif): TKKTTTGTTTTTTT Consensus sequence (reverse complement motif): AAAAAAACAAARRA Alignment: AAAAAAACAAARRA -RARAT-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 44 NR4A2 Reverse Complement Original Motif Backward 4 5 0.0276382 Consensus sequence (original motif): AAGGTCAC Consensus sequence (reverse complement motif): GTGACCTT Alignment: AAGGTCAC RARAT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 22 NR2F1 Reverse Complement Reverse Complement Backward 3 5 0.0279129 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: AKGYYCAAAGRTCA -------RARAT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 37 MIZF Original Motif Original Motif Backward 4 5 0.0292478 Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV Alignment: BAACGTCCGC --ATKTM--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 43 NR1H2RXRA Original Motif Original Motif Forward 10 5 0.0292478 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC ---------ATKTM--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 PPARGRXRA Original Motif Reverse Complement Forward 5 5 0.0305369 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: TGRCCTKTGHCCKAB ----ATKTM------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 REST Original Motif Reverse Complement Backward 13 5 0.0315454 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA ----ATKTM------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 47 RXRRAR_DR5 Original Motif Original Motif Backward 13 5 0.0335956 Consensus sequence (original motif): RGKTCABVVRGAGGTCA Consensus sequence (reverse complement motif): TGACCTCKVVBTGAYCK Alignment: RGKTCABVVRGAGGTCA ATKTM------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 46 RORA_1 Reverse Complement Original Motif Backward 3 5 0.0336052 Consensus sequence (original motif): AWVDAGGTCA Consensus sequence (reverse complement motif): TGACCTDVWT Alignment: AWVDAGGTCA ---RARAT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 26 Motif name: ArntAhr Consensus sequence (original motif): YGCGTG Consensus sequence (reverse complement motif): CACGCM ************************************************************** Best Matches for Significant Motif ID 26 (Highest to Lowest) ************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 28 Egr1 Original Motif Original Motif Forward 1 6 0 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: HGCGTGGGCGK YGCGTG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 33 HIF1AARNT Original Motif Original Motif Backward 2 6 0.0112447 Consensus sequence (original motif): VBACGTGV Consensus sequence (reverse complement motif): VCACGTBV Alignment: VBACGTGV -YGCGTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 11 Motif 11 Original Motif Reverse Complement Forward 7 6 0.0308396 Consensus sequence (original motif): CAYACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTKTG Alignment: TGTGTGTGTGTKTG ------YGCGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 31 Esrrb Original Motif Original Motif Backward 1 6 0.0315972 Consensus sequence (original motif): CACGTG Consensus sequence (reverse complement motif): CACGTG Alignment: CACGTG YGCGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 25 Arnt Original Motif Original Motif Forward 1 6 0.0315972 Consensus sequence (original motif): CACGTG Consensus sequence (reverse complement motif): CACGTG Alignment: CACGTG YGCGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 9 Motif 9 Reverse Complement Original Motif Forward 9 6 0.0350575 Consensus sequence (original motif): CACACAVRCACACA Consensus sequence (reverse complement motif): TGTGTGKVTGTGTG Alignment: CACACAVRCACACA --------CACGCM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 39 MYCMAX Original Motif Original Motif Forward 4 6 0.0376488 Consensus sequence (original motif): RASCACGTGGT Consensus sequence (reverse complement motif): ACCACGTGSTM Alignment: RASCACGTGGT ---YGCGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 40 Mycn Original Motif Reverse Complement Forward 3 6 0.0377949 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: GCCACGTGSD --YGCGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 38 Myc Original Motif Reverse Complement Backward 3 6 0.0399214 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: DCCACGTGCV --YGCGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 RREB1 Original Motif Reverse Complement Backward 7 6 0.0433081 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: BGRRRGRGGRTGRTTYGGGG --------YGCGTG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 6 Motif name: Motif 6 Consensus sequence (original motif): CMGCRGC Consensus sequence (reverse complement motif): GCKGCYG ************************************************************** Best Matches for Significant Motif ID 6 (Highest to Lowest) ************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 REST Original Motif Original Motif Backward 13 7 0.0205607 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC --CMGCRGC------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 37 MIZF Reverse Complement Reverse Complement Forward 1 7 0.0322623 Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV Alignment: GCGGACGTTV GCKGCYG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 12 Zfx Original Motif Original Motif Backward 4 7 0.038091 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV ----CMGCRGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 15 TFAP2A Original Motif Reverse Complement Backward 1 7 0.0393168 Consensus sequence (original motif): GCCBBVRGS Consensus sequence (reverse complement motif): SCMVBBGGC Alignment: SCMVBBGGC --CMGCRGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 7 Motif 7 Original Motif Original Motif Forward 2 7 0.0443244 Consensus sequence (original motif): CCCRCCCC Consensus sequence (reverse complement motif): GGGGMGGG Alignment: CCCRCCCC -CMGCRGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 45 Pax5 Reverse Complement Reverse Complement Backward 7 7 0.0448462 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD -------GCKGCYG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 28 Egr1 Reverse Complement Original Motif Backward 2 7 0.0453576 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: HGCGTGGGCGK ---GCKGCYG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 36 Klf4 Original Motif Reverse Complement Forward 2 7 0.0476958 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: GCCYCMCCCD -CMGCRGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 16 SP1 Reverse Complement Reverse Complement Forward 1 7 0.0490991 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: GGGGGYGGGG GCKGCYG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 RREB1 Reverse Complement Reverse Complement Forward 6 7 0.0498726 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: BGRRRGRGGRTGRTTYGGGG -----GCKGCYG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 2 Motif name: Motif 2 Consensus sequence (original motif): AMACA Consensus sequence (reverse complement motif): TGTRT ************************************************************** Best Matches for Significant Motif ID 2 (Highest to Lowest) ************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 11 Motif 11 Original Motif Original Motif Forward 6 5 0 Consensus sequence (original motif): CAYACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTKTG Alignment: CAYACACACACACA -----AMACA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 9 Motif 9 Reverse Complement Reverse Complement Backward 10 5 0.0040753 Consensus sequence (original motif): CACACAVRCACACA Consensus sequence (reverse complement motif): TGTGTGKVTGTGTG Alignment: TGTGTGKVTGTGTG TGTRT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 RREB1 Original Motif Original Motif Backward 11 5 0.0243918 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: CCCCMAAMCAMCCMCMMMCV -----AMACA---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 10 Motif 10 Original Motif Reverse Complement Backward 6 5 0.0394919 Consensus sequence (original motif): TKKTTTGTTTTTTT Consensus sequence (reverse complement motif): AAAAAAACAAARRA Alignment: AAAAAAACAAARRA ----AMACA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 24 Ar Original Motif Original Motif Forward 5 5 0.0429089 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: HWDAGHACRHHVTGTHCCHVMV ----AMACA------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 PPARGRXRA Reverse Complement Reverse Complement Backward 6 5 0.0595073 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: TGRCCTKTGHCCKAB -----TGTRT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 26 ArntAhr Reverse Complement Original Motif Backward 2 5 0.0600161 Consensus sequence (original motif): YGCGTG Consensus sequence (reverse complement motif): CACGCM Alignment: YGCGTG TGTRT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 45 Pax5 Original Motif Reverse Complement Forward 6 5 0.0620995 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD -----AMACA---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 22 NR2F1 Original Motif Reverse Complement Forward 7 5 0.0650242 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: AKGYYCAAAGRTCA ------AMACA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 35 INSM1 Reverse Complement Original Motif Backward 8 5 0.0670984 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: TGYCAGGGGGCR TGTRT------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 23 Motif name: MZF1_1-4 Consensus sequence (original motif): BGGGGA Consensus sequence (reverse complement motif): TCCCCV ************************************************************** Best Matches for Significant Motif ID 23 (Highest to Lowest) ************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 35 INSM1 Reverse Complement Reverse Complement Forward 3 6 0.0276389 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: MGCCCCCTGMCA --TCCCCV---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 41 MZF1_5-13 Original Motif Original Motif Forward 4 6 0.0314583 Consensus sequence (original motif): BKAGGGGDAD Consensus sequence (reverse complement motif): BTHCCCCTYB Alignment: BKAGGGGDAD ---BGGGGA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 36 Klf4 Reverse Complement Reverse Complement Forward 1 6 0.0406514 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: GCCYCMCCCD TCCCCV---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 21 PLAG1 Original Motif Original Motif Forward 9 6 0.0412963 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: GGGGCCCAAGGGGG --------BGGGGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 8 Motif 8 Reverse Complement Reverse Complement Forward 1 6 0.0426517 Consensus sequence (original motif): CTGGGA Consensus sequence (reverse complement motif): TCCCAG Alignment: TCCCAG TCCCCV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 16 SP1 Original Motif Reverse Complement Forward 5 6 0.0464881 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: GGGGGYGGGG ----BGGGGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 RREB1 Reverse Complement Original Motif Forward 5 6 0.0493561 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: CCCCMAAMCAMCCMCMMMCV ----TCCCCV---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 42 NFKB1 Reverse Complement Original Motif Forward 6 6 0.0521759 Consensus sequence (original motif): GGGGRTTCCCC Consensus sequence (reverse complement motif): GGGGAAKCCCC Alignment: GGGGRTTCCCC -----TCCCCV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 REST Reverse Complement Reverse Complement Backward 11 6 0.0581528 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA -----TCCCCV---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 24 Ar Reverse Complement Original Motif Backward 3 6 0.0585417 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: HWDAGHACRHHVTGTHCCHVMV --------------TCCCCV-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 44 Motif name: NR4A2 Consensus sequence (original motif): AAGGTCAC Consensus sequence (reverse complement motif): GTGACCTT ************************************************************** Best Matches for Significant Motif ID 44 (Highest to Lowest) ************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 43 NR1H2RXRA Original Motif Original Motif Backward 9 8 0.0167759 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC -AAGGTCAC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 29 ESR1 Original Motif Original Motif Forward 5 8 0.0195235 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY ----AAGGTCAC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 30 ESR2 Reverse Complement Reverse Complement Forward 10 8 0.0198372 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: BAGGYCABHBTGACCKHV ---------GTGACCTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 24 Ar Reverse Complement Reverse Complement Forward 13 8 0.0487608 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: VRVDGGHACAVDDKGTHCTDWH ------------GTGACCTT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 PPARGRXRA Original Motif Original Motif Backward 7 8 0.0495607 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA -AAGGTCAC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 22 NR2F1 Original Motif Reverse Complement Forward 7 8 0.0564874 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: AKGYYCAAAGRTCA ------AAGGTCAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 REST Original Motif Original Motif Backward 5 8 0.0594649 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC ---------AAGGTCAC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 12 Zfx Reverse Complement Original Motif Forward 1 8 0.0631514 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV GTGACCTT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 RREB1 Reverse Complement Reverse Complement Backward 4 8 0.0720656 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: BGRRRGRGGRTGRTTYGGGG ---------GTGACCTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 48 Tcfcp2l1 Reverse Complement Reverse Complement Backward 2 8 0.0740998 Consensus sequence (original motif): CCAGYYHVADCCRG Consensus sequence (reverse complement motif): CKGGDTBDMMCTGG Alignment: CKGGDTBDMMCTGG -----GTGACCTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 15 Motif name: TFAP2A Consensus sequence (original motif): GCCBBVRGS Consensus sequence (reverse complement motif): SCMVBBGGC ************************************************************** Best Matches for Significant Motif ID 15 (Highest to Lowest) ************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 12 Zfx Reverse Complement Original Motif Backward 3 9 0.0131247 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV ---SCMVBBGGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 21 PLAG1 Original Motif Original Motif Forward 4 9 0.0414588 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: GGGGCCCAAGGGGG ---GCCBBVRGS-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 13 Zfp423 Reverse Complement Reverse Complement Backward 4 9 0.0438157 Consensus sequence (original motif): GSMMCCYARGGKKKC Consensus sequence (reverse complement motif): GYRYCCMTKGGYRSC Alignment: GYRYCCMTKGGYRSC ---SCMVBBGGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 29 ESR1 Original Motif Reverse Complement Backward 2 9 0.0450672 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV ----------GCCBBVRGS- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 30 ESR2 Reverse Complement Reverse Complement Forward 6 9 0.0531668 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: BAGGYCABHBTGACCKHV -----SCMVBBGGC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 40 Mycn Reverse Complement Original Motif Forward 2 9 0.0550803 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: HSCACGTGGC -SCMVBBGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 45 Pax5 Original Motif Reverse Complement Forward 8 9 0.0581255 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD -------GCCBBVRGS---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 47 RXRRAR_DR5 Original Motif Original Motif Backward 7 9 0.0606062 Consensus sequence (original motif): RGKTCABVVRGAGGTCA Consensus sequence (reverse complement motif): TGACCTCKVVBTGAYCK Alignment: RGKTCABVVRGAGGTCA --GCCBBVRGS------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 38 Myc Reverse Complement Original Motif Forward 2 9 0.0613455 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: VGCACGTGGH -SCMVBBGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 48 Tcfcp2l1 Original Motif Original Motif Backward 3 9 0.0631412 Consensus sequence (original motif): CCAGYYHVADCCRG Consensus sequence (reverse complement motif): CKGGDTBDMMCTGG Alignment: CCAGYYHVADCCRG ---GCCBBVRGS-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 25 Motif name: Arnt Consensus sequence (original motif): CACGTG Consensus sequence (reverse complement motif): CACGTG ************************************************************** Best Matches for Significant Motif ID 25 (Highest to Lowest) ************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 31 Esrrb Original Motif Original Motif Forward 1 6 0 Consensus sequence (original motif): CACGTG Consensus sequence (reverse complement motif): CACGTG Alignment: CACGTG CACGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 39 MYCMAX Original Motif Original Motif Backward 3 6 0.0143849 Consensus sequence (original motif): RASCACGTGGT Consensus sequence (reverse complement motif): ACCACGTGSTM Alignment: RASCACGTGGT ---CACGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 38 Myc Original Motif Original Motif Forward 3 6 0.0267529 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: VGCACGTGGH --CACGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 40 Mycn Reverse Complement Reverse Complement Backward 3 6 0.0272641 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: GCCACGTGSD --CACGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 33 HIF1AARNT Original Motif Original Motif Backward 2 6 0.0347756 Consensus sequence (original motif): VBACGTGV Consensus sequence (reverse complement motif): VCACGTBV Alignment: VBACGTGV -CACGTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 26 ArntAhr Original Motif Original Motif Forward 1 6 0.065625 Consensus sequence (original motif): YGCGTG Consensus sequence (reverse complement motif): CACGCM Alignment: YGCGTG CACGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 14 ZEB1 Reverse Complement Original Motif Forward 1 6 0.0689533 Consensus sequence (original motif): CACCTD Consensus sequence (reverse complement motif): HAGGTG Alignment: CACCTD CACGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 28 Egr1 Original Motif Original Motif Forward 1 6 0.0784722 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: HGCGTGGGCGK CACGTG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 37 MIZF Original Motif Original Motif Backward 4 6 0.0854167 Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV Alignment: BAACGTCCGC -CACGTG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 21 PLAG1 Original Motif Original Motif Forward 7 6 0.105093 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: GGGGCCCAAGGGGG ------CACGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- **************************************************************************************************************************************************************************************************** ********************************************************************** Best Matches for Each Motif (Highest to Lowest) ***************************************************************************** Dataset #: 1 Motif ID: 1 Motif name: Motif 1 Consensus sequence (original motif): RGGAAR Consensus sequence (reverse complement motif): MTTCCK ************************************************************************ Best Matches for Motif ID 1 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 32 EWSR1-FLI1 Reverse Complement Reverse Complement Backward 12 6 0.0146511 Consensus sequence (original motif): GGAAGGAAGGAAGGAAGG Consensus sequence (reverse complement motif): CCTTCCTTCCTTCCTTCC Alignment: CCTTCCTTCCTTCCTTCC -MTTCCK----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 37 MIZF Reverse Complement Original Motif Forward 4 6 0.0608243 Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV Alignment: BAACGTCCGC ---MTTCCK- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 41 MZF1_5-13 Original Motif Original Motif Backward 1 6 0.0753789 Consensus sequence (original motif): BKAGGGGDAD Consensus sequence (reverse complement motif): BTHCCCCTYB Alignment: BKAGGGGDAD ----RGGAAR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 42 NFKB1 Original Motif Reverse Complement Backward 5 6 0.0757695 Consensus sequence (original motif): GGGGRTTCCCC Consensus sequence (reverse complement motif): GGGGAAKCCCC Alignment: GGGGAAKCCCC -RGGAAR---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 PPARGRXRA Original Motif Original Motif Backward 7 6 0.0800484 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA ---RGGAAR------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 7 Motif 7 Original Motif Reverse Complement Backward 3 6 0.0827261 Consensus sequence (original motif): CCCRCCCC Consensus sequence (reverse complement motif): GGGGMGGG Alignment: GGGGMGGG RGGAAR-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 REST Original Motif Original Motif Backward 6 6 0.0829223 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC ----------RGGAAR----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 35 INSM1 Original Motif Original Motif Backward 1 6 0.0832926 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: TGYCAGGGGGCR ------RGGAAR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 RREB1 Original Motif Reverse Complement Forward 5 6 0.0835516 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: BGRRRGRGGRTGRTTYGGGG ----RGGAAR---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 24 Ar Original Motif Original Motif Forward 4 6 0.0836451 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: HWDAGHACRHHVTGTHCCHVMV ---RGGAAR------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 27 E2F1 Original Motif Reverse Complement Backward 1 6 0.0842331 Consensus sequence (original motif): TTTSGCGC Consensus sequence (reverse complement motif): GCGCSAAA Alignment: GCGCSAAA --RGGAAR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 2 Motif name: Motif 2 Consensus sequence (original motif): AMACA Consensus sequence (reverse complement motif): TGTRT ************************************************************************ Best Matches for Motif ID 2 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 11 Motif 11 Original Motif Original Motif Forward 6 5 0 Consensus sequence (original motif): CAYACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTKTG Alignment: CAYACACACACACA -----AMACA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 9 Motif 9 Reverse Complement Reverse Complement Backward 10 5 0.0040753 Consensus sequence (original motif): CACACAVRCACACA Consensus sequence (reverse complement motif): TGTGTGKVTGTGTG Alignment: TGTGTGKVTGTGTG TGTRT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 RREB1 Original Motif Original Motif Backward 11 5 0.0243918 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: CCCCMAAMCAMCCMCMMMCV -----AMACA---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 10 Motif 10 Original Motif Reverse Complement Backward 6 5 0.0394919 Consensus sequence (original motif): TKKTTTGTTTTTTT Consensus sequence (reverse complement motif): AAAAAAACAAARRA Alignment: AAAAAAACAAARRA ----AMACA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 24 Ar Original Motif Original Motif Forward 5 5 0.0429089 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: HWDAGHACRHHVTGTHCCHVMV ----AMACA------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 PPARGRXRA Reverse Complement Reverse Complement Backward 6 5 0.0595073 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: TGRCCTKTGHCCKAB -----TGTRT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 26 ArntAhr Reverse Complement Original Motif Backward 2 5 0.0600161 Consensus sequence (original motif): YGCGTG Consensus sequence (reverse complement motif): CACGCM Alignment: YGCGTG TGTRT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 45 Pax5 Original Motif Reverse Complement Forward 6 5 0.0620995 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD -----AMACA---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 22 NR2F1 Original Motif Reverse Complement Forward 7 5 0.0650242 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: AKGYYCAAAGRTCA ------AMACA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 35 INSM1 Reverse Complement Original Motif Backward 8 5 0.0670984 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: TGYCAGGGGGCR TGTRT------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 3 Motif name: Motif 3 Consensus sequence (original motif): AGSCWGG Consensus sequence (reverse complement motif): CCWGSCT ************************************************************************ Best Matches for Motif ID 3 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 32 EWSR1-FLI1 Original Motif Original Motif Forward 8 7 0.0395671 Consensus sequence (original motif): GGAAGGAAGGAAGGAAGG Consensus sequence (reverse complement motif): CCTTCCTTCCTTCCTTCC Alignment: GGAAGGAAGGAAGGAAGG -------AGSCWGG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 35 INSM1 Reverse Complement Reverse Complement Backward 1 7 0.0494688 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: MGCCCCCTGMCA -----CCWGSCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 48 Tcfcp2l1 Reverse Complement Original Motif Forward 1 7 0.0669354 Consensus sequence (original motif): CCAGYYHVADCCRG Consensus sequence (reverse complement motif): CKGGDTBDMMCTGG Alignment: CCAGYYHVADCCRG CCWGSCT------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 REST Original Motif Original Motif Forward 7 7 0.0693747 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC ------AGSCWGG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 16 SP1 Reverse Complement Original Motif Backward 3 7 0.0695377 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: CCCCKCCCCC -CCWGSCT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 12 Zfx Reverse Complement Original Motif Backward 2 7 0.0720685 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV ------CCWGSCT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 7 Motif 7 Original Motif Reverse Complement Forward 2 7 0.0742342 Consensus sequence (original motif): CCCRCCCC Consensus sequence (reverse complement motif): GGGGMGGG Alignment: GGGGMGGG -AGSCWGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 29 ESR1 Reverse Complement Reverse Complement Forward 13 7 0.0771405 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV ------------CCWGSCT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 46 RORA_1 Reverse Complement Reverse Complement Forward 4 7 0.0772276 Consensus sequence (original motif): AWVDAGGTCA Consensus sequence (reverse complement motif): TGACCTDVWT Alignment: TGACCTDVWT ---CCWGSCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 36 Klf4 Reverse Complement Reverse Complement Backward 1 7 0.0798994 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: GCCYCMCCCD ---CCWGSCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 4 Motif name: Motif 4 Consensus sequence (original motif): CTCTGY Consensus sequence (reverse complement motif): KCAGAG ************************************************************************ Best Matches for Motif ID 4 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 43 NR1H2RXRA Reverse Complement Original Motif Forward 6 6 0.012269 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC -----KCAGAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 PPARGRXRA Reverse Complement Original Motif Forward 6 6 0.0140102 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA -----KCAGAG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 22 NR2F1 Reverse Complement Reverse Complement Forward 5 6 0.0186793 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: AKGYYCAAAGRTCA ----KCAGAG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 34 HNF4A Reverse Complement Original Motif Forward 4 6 0.020602 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: RGGBCAAAGKYCA ---KCAGAG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 37 MIZF Original Motif Original Motif Forward 5 6 0.0221665 Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV Alignment: BAACGTCCGC ----CTCTGY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 35 INSM1 Reverse Complement Original Motif Forward 3 6 0.0255256 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: TGYCAGGGGGCR --KCAGAG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 16 SP1 Original Motif Original Motif Backward 5 6 0.0349642 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: CCCCKCCCCC CTCTGY---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 REST Original Motif Reverse Complement Backward 14 6 0.0376108 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA --CTCTGY------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 8 Motif 8 Reverse Complement Reverse Complement Backward 1 6 0.0446026 Consensus sequence (original motif): CTGGGA Consensus sequence (reverse complement motif): TCCCAG Alignment: TCCCAG KCAGAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 12 Zfx Reverse Complement Original Motif Forward 4 6 0.0448449 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV ---KCAGAG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 5 Motif name: Motif 5 Consensus sequence (original motif): ATKTM Consensus sequence (reverse complement motif): RARAT ************************************************************************ Best Matches for Motif ID 5 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 RREB1 Reverse Complement Reverse Complement Backward 10 5 0.0256083 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: BGRRRGRGGRTGRTTYGGGG ------RARAT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 10 Motif 10 Reverse Complement Reverse Complement Forward 2 5 0.0260117 Consensus sequence (original motif): TKKTTTGTTTTTTT Consensus sequence (reverse complement motif): AAAAAAACAAARRA Alignment: AAAAAAACAAARRA -RARAT-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 44 NR4A2 Reverse Complement Original Motif Backward 4 5 0.0276382 Consensus sequence (original motif): AAGGTCAC Consensus sequence (reverse complement motif): GTGACCTT Alignment: AAGGTCAC RARAT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 22 NR2F1 Reverse Complement Reverse Complement Backward 3 5 0.0279129 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: AKGYYCAAAGRTCA -------RARAT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 37 MIZF Original Motif Original Motif Backward 4 5 0.0292478 Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV Alignment: BAACGTCCGC --ATKTM--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 43 NR1H2RXRA Original Motif Original Motif Forward 10 5 0.0292478 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC ---------ATKTM--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 PPARGRXRA Original Motif Reverse Complement Forward 5 5 0.0305369 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: TGRCCTKTGHCCKAB ----ATKTM------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 REST Original Motif Reverse Complement Backward 13 5 0.0315454 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA ----ATKTM------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 47 RXRRAR_DR5 Original Motif Original Motif Backward 13 5 0.0335956 Consensus sequence (original motif): RGKTCABVVRGAGGTCA Consensus sequence (reverse complement motif): TGACCTCKVVBTGAYCK Alignment: RGKTCABVVRGAGGTCA ATKTM------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 46 RORA_1 Reverse Complement Original Motif Backward 3 5 0.0336052 Consensus sequence (original motif): AWVDAGGTCA Consensus sequence (reverse complement motif): TGACCTDVWT Alignment: AWVDAGGTCA ---RARAT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 6 Motif name: Motif 6 Consensus sequence (original motif): CMGCRGC Consensus sequence (reverse complement motif): GCKGCYG ************************************************************************ Best Matches for Motif ID 6 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 REST Original Motif Original Motif Backward 13 7 0.0205607 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC --CMGCRGC------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 37 MIZF Reverse Complement Reverse Complement Forward 1 7 0.0322623 Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV Alignment: GCGGACGTTV GCKGCYG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 12 Zfx Original Motif Original Motif Backward 4 7 0.038091 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV ----CMGCRGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 15 TFAP2A Original Motif Reverse Complement Backward 1 7 0.0393168 Consensus sequence (original motif): GCCBBVRGS Consensus sequence (reverse complement motif): SCMVBBGGC Alignment: SCMVBBGGC --CMGCRGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 7 Motif 7 Original Motif Original Motif Forward 2 7 0.0443244 Consensus sequence (original motif): CCCRCCCC Consensus sequence (reverse complement motif): GGGGMGGG Alignment: CCCRCCCC -CMGCRGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 45 Pax5 Reverse Complement Reverse Complement Backward 7 7 0.0448462 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD -------GCKGCYG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 28 Egr1 Reverse Complement Original Motif Backward 2 7 0.0453576 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: HGCGTGGGCGK ---GCKGCYG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 36 Klf4 Original Motif Reverse Complement Forward 2 7 0.0476958 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: GCCYCMCCCD -CMGCRGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 16 SP1 Reverse Complement Reverse Complement Forward 1 7 0.0490991 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: GGGGGYGGGG GCKGCYG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 RREB1 Reverse Complement Reverse Complement Forward 6 7 0.0498726 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: BGRRRGRGGRTGRTTYGGGG -----GCKGCYG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 7 Motif name: Motif 7 Consensus sequence (original motif): CCCRCCCC Consensus sequence (reverse complement motif): GGGGMGGG ************************************************************************ Best Matches for Motif ID 7 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 16 SP1 Original Motif Original Motif Backward 2 8 0.0423611 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: CCCCKCCCCC -CCCRCCCC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 36 Klf4 Reverse Complement Original Motif Forward 1 8 0.0461644 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: DGGGYGKGGC GGGGMGGG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 28 Egr1 Original Motif Reverse Complement Forward 4 8 0.0650374 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: YCGCCCACGCH ---CCCRCCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 RREB1 Original Motif Original Motif Forward 2 8 0.076401 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: CCCCMAAMCAMCCMCMMMCV -CCCRCCCC----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 42 NFKB1 Reverse Complement Reverse Complement Forward 1 8 0.0893429 Consensus sequence (original motif): GGGGRTTCCCC Consensus sequence (reverse complement motif): GGGGAAKCCCC Alignment: GGGGAAKCCCC GGGGMGGG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 35 INSM1 Reverse Complement Original Motif Forward 1 8 0.0936832 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: TGYCAGGGGGCR GGGGMGGG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 32 EWSR1-FLI1 Reverse Complement Original Motif Backward 5 8 0.0950969 Consensus sequence (original motif): GGAAGGAAGGAAGGAAGG Consensus sequence (reverse complement motif): CCTTCCTTCCTTCCTTCC Alignment: GGAAGGAAGGAAGGAAGG ------GGGGMGGG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 21 PLAG1 Reverse Complement Original Motif Forward 1 8 0.0998932 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: GGGGCCCAAGGGGG GGGGMGGG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 12 Zfx Original Motif Original Motif Forward 5 8 0.10221 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV ----CCCRCCCC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 45 Pax5 Reverse Complement Original Motif Forward 9 8 0.102497 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR --------GGGGMGGG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 8 Motif name: Motif 8 Consensus sequence (original motif): CTGGGA Consensus sequence (reverse complement motif): TCCCAG ************************************************************************ Best Matches for Motif ID 8 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 REST Reverse Complement Reverse Complement Backward 9 6 0.0392549 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA -------TCCCAG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 23 MZF1_1-4 Reverse Complement Reverse Complement Forward 1 6 0.0416319 Consensus sequence (original motif): BGGGGA Consensus sequence (reverse complement motif): TCCCCV Alignment: TCCCCV TCCCAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 RREB1 Original Motif Reverse Complement Backward 1 6 0.0509122 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: BGRRRGRGGRTGRTTYGGGG --------------CTGGGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 35 INSM1 Original Motif Original Motif Forward 4 6 0.0557857 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: TGYCAGGGGGCR ---CTGGGA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 13 Zfp423 Reverse Complement Reverse Complement Forward 4 6 0.0624145 Consensus sequence (original motif): GSMMCCYARGGKKKC Consensus sequence (reverse complement motif): GYRYCCMTKGGYRSC Alignment: GYRYCCMTKGGYRSC ---TCCCAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 43 NR1H2RXRA Reverse Complement Original Motif Backward 7 6 0.0650784 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC -----TCCCAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 48 Tcfcp2l1 Original Motif Reverse Complement Forward 1 6 0.0663804 Consensus sequence (original motif): CCAGYYHVADCCRG Consensus sequence (reverse complement motif): CKGGDTBDMMCTGG Alignment: CKGGDTBDMMCTGG CTGGGA-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 28 Egr1 Reverse Complement Reverse Complement Forward 3 6 0.0678562 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: YCGCCCACGCH --TCCCAG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 24 Ar Reverse Complement Original Motif Backward 3 6 0.0714107 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: HWDAGHACRHHVTGTHCCHVMV --------------TCCCAG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 12 Zfx Original Motif Original Motif Backward 4 6 0.0718041 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV -----CTGGGA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 9 Motif name: Motif 9 Consensus sequence (original motif): CACACAVRCACACA Consensus sequence (reverse complement motif): TGTGTGKVTGTGTG ************************************************************************ Best Matches for Motif ID 9 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 11 Motif 11 Original Motif Original Motif Forward 1 14 0.0170175 Consensus sequence (original motif): CAYACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTKTG Alignment: CAYACACACACACA CACACAVRCACACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 RREB1 Original Motif Original Motif Backward 3 14 0.0868786 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: CCCCMAAMCAMCCMCMMMCV ----CACACAVRCACACA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 10 Motif 10 Reverse Complement Original Motif Forward 2 13 0.578949 Consensus sequence (original motif): TKKTTTGTTTTTTT Consensus sequence (reverse complement motif): AAAAAAACAAARRA Alignment: TKKTTTGTTTTTTT- -TGTGTGKVTGTGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 17 RXRAVDR Reverse Complement Original Motif Backward 3 13 0.593978 Consensus sequence (original motif): GGGTCAWBGRGTTCA Consensus sequence (reverse complement motif): TGAACKCBWTGACCC Alignment: -GGGTCAWBGRGTTCA TGTGTGKVTGTGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 24 Ar Original Motif Reverse Complement Backward 11 12 1.09291 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: --VRVDGGHACAVDDKGTHCTDWH CACACAVRCACACA---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 28 Egr1 Reverse Complement Original Motif Forward 1 11 1.57424 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: HGCGTGGGCGK--- TGTGTGKVTGTGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 29 ESR1 Original Motif Original Motif Forward 10 11 1.58704 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY--- ---------CACACAVRCACACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 35 INSM1 Original Motif Reverse Complement Forward 3 10 2.08086 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: MGCCCCCTGMCA---- --CACACAVRCACACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 36 Klf4 Reverse Complement Original Motif Forward 1 10 2.0884 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: DGGGYGKGGC---- TGTGTGKVTGTGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 34 HNF4A Reverse Complement Reverse Complement Forward 4 10 2.09226 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: TGMYCTTTGBCCK---- ---TGTGTGKVTGTGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 10 Motif name: Motif 10 Consensus sequence (original motif): TKKTTTGTTTTTTT Consensus sequence (reverse complement motif): AAAAAAACAAARRA ************************************************************************ Best Matches for Motif ID 10 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 32 EWSR1-FLI1 Reverse Complement Original Motif Forward 3 14 0.0424269 Consensus sequence (original motif): GGAAGGAAGGAAGGAAGG Consensus sequence (reverse complement motif): CCTTCCTTCCTTCCTTCC Alignment: GGAAGGAAGGAAGGAAGG --AAAAAAACAAARRA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 9 Motif 9 Reverse Complement Original Motif Backward 2 13 0.529035 Consensus sequence (original motif): CACACAVRCACACA Consensus sequence (reverse complement motif): TGTGTGKVTGTGTG Alignment: -CACACAVRCACACA AAAAAAACAAARRA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 11 Motif 11 Original Motif Reverse Complement Backward 2 13 0.531594 Consensus sequence (original motif): CAYACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTKTG Alignment: -TGTGTGTGTGTKTG TKKTTTGTTTTTTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 43 NR1H2RXRA Reverse Complement Original Motif Backward 5 13 0.535643 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: -AAAGGTCAAAGGTCAAC AAAAAAACAAARRA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 PPARGRXRA Reverse Complement Original Motif Backward 3 13 0.543043 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: -BTRGGDCARAGGKCA AAAAAAACAAARRA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 24 Ar Original Motif Reverse Complement Forward 10 13 0.544053 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: VRVDGGHACAVDDKGTHCTDWH- ---------TKKTTTGTTTTTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 22 NR2F1 Reverse Complement Reverse Complement Backward 3 12 1.04059 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: --AKGYYCAAAGRTCA AAAAAAACAAARRA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 34 HNF4A Reverse Complement Original Motif Backward 3 11 1.53429 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: ---RGGBCAAAGKYCA AAAAAAACAAARRA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 45 Pax5 Reverse Complement Original Motif Backward 10 11 1.54022 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: ---DGVBCABTGDWGCGKRRCSR AAAAAAACAAARRA--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 RREB1 Reverse Complement Original Motif Backward 11 10 2.0484 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: ----CCCCMAAMCAMCCMCMMMCV AAAAAAACAAARRA---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 11 Motif name: Motif 11 Consensus sequence (original motif): CAYACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTKTG ************************************************************************ Best Matches for Motif ID 11 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 9 Motif 9 Original Motif Original Motif Forward 1 14 0.0170175 Consensus sequence (original motif): CACACAVRCACACA Consensus sequence (reverse complement motif): TGTGTGKVTGTGTG Alignment: CACACAVRCACACA CAYACACACACACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 RREB1 Original Motif Original Motif Backward 3 14 0.0837439 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: CCCCMAAMCAMCCMCMMMCV ----CAYACACACACACA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 10 Motif 10 Original Motif Reverse Complement Forward 2 13 0.581509 Consensus sequence (original motif): TKKTTTGTTTTTTT Consensus sequence (reverse complement motif): AAAAAAACAAARRA Alignment: AAAAAAACAAARRA- -CAYACACACACACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 35 INSM1 Reverse Complement Original Motif Backward 1 12 1.09362 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: --TGYCAGGGGGCR TGTGTGTGTGTKTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 28 Egr1 Reverse Complement Original Motif Forward 1 11 1.56977 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: HGCGTGGGCGK--- TGTGTGTGTGTKTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 29 ESR1 Original Motif Original Motif Forward 10 11 1.59795 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY--- ---------CAYACACACACACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 36 Klf4 Reverse Complement Original Motif Forward 1 10 2.08683 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: DGGGYGKGGC---- TGTGTGTGTGTKTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 16 SP1 Reverse Complement Reverse Complement Backward 2 9 2.59204 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: -----GGGGGYGGGG TGTGTGTGTGTKTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 7 Motif 7 Original Motif Original Motif Backward 1 8 3.09205 Consensus sequence (original motif): CCCRCCCC Consensus sequence (reverse complement motif): GGGGMGGG Alignment: ------CCCRCCCC CAYACACACACACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 33 HIF1AARNT Reverse Complement Original Motif Backward 2 7 3.58699 Consensus sequence (original motif): VBACGTGV Consensus sequence (reverse complement motif): VCACGTBV Alignment: -------VBACGTGV TGTGTGTGTGTKTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 12 Motif name: Zfx Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB ************************************************************************ Best Matches for Motif ID 12 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 45 Pax5 Original Motif Original Motif Backward 5 14 0.0611182 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR --BBVGCCBVGGCCTV---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 30 ESR2 Original Motif Reverse Complement Backward 2 14 0.0635714 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: BAGGYCABHBTGACCKHV ---BBVGCCBVGGCCTV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 29 ESR1 Original Motif Reverse Complement Backward 5 14 0.0722733 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV --BBVGCCBVGGCCTV---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 48 Tcfcp2l1 Original Motif Original Motif Backward 1 14 0.0732898 Consensus sequence (original motif): CCAGYYHVADCCRG Consensus sequence (reverse complement motif): CKGGDTBDMMCTGG Alignment: CCAGYYHVADCCRG BBVGCCBVGGCCTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 13 Zfp423 Reverse Complement Reverse Complement Forward 2 14 0.0747812 Consensus sequence (original motif): GSMMCCYARGGKKKC Consensus sequence (reverse complement motif): GYRYCCMTKGGYRSC Alignment: GYRYCCMTKGGYRSC -VAGGCCBBGGCVBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 21 PLAG1 Original Motif Reverse Complement Forward 1 14 0.0796879 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: CCCCCTTGGGCCCC BBVGCCBVGGCCTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 REST Reverse Complement Reverse Complement Forward 5 14 0.0812253 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA ----VAGGCCBBGGCVBB--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 24 Ar Reverse Complement Original Motif Backward 4 14 0.0832838 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: HWDAGHACRHHVTGTHCCHVMV -----VAGGCCBBGGCVBB--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 PPARGRXRA Original Motif Reverse Complement Forward 1 14 0.0836605 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: TGRCCTKTGHCCKAB BBVGCCBVGGCCTV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 47 RXRRAR_DR5 Original Motif Reverse Complement Forward 5 13 0.570818 Consensus sequence (original motif): RGKTCABVVRGAGGTCA Consensus sequence (reverse complement motif): TGACCTCKVVBTGAYCK Alignment: TGACCTCKVVBTGAYCK- ----BBVGCCBVGGCCTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 13 Motif name: Zfp423 Consensus sequence (original motif): GSMMCCYARGGKKKC Consensus sequence (reverse complement motif): GYRYCCMTKGGYRSC ************************************************************************ Best Matches for Motif ID 13 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 24 Ar Original Motif Original Motif Backward 5 15 0.0400042 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: HWDAGHACRHHVTGTHCCHVMV ---GSMMCCYARGGKKKC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 45 Pax5 Original Motif Original Motif Forward 3 15 0.0400673 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR --GSMMCCYARGGKKKC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 REST Reverse Complement Original Motif Backward 4 15 0.0410001 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC ---GYRYCCMTKGGYRSC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 17 RXRAVDR Reverse Complement Original Motif Forward 1 15 0.0465067 Consensus sequence (original motif): GGGTCAWBGRGTTCA Consensus sequence (reverse complement motif): TGAACKCBWTGACCC Alignment: GGGTCAWBGRGTTCA GYRYCCMTKGGYRSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 21 PLAG1 Original Motif Original Motif Forward 1 14 0.527928 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: GGGGCCCAAGGGGG- GSMMCCYARGGKKKC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 12 Zfx Reverse Complement Reverse Complement Backward 1 14 0.53991 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: -VAGGCCBBGGCVBB GYRYCCMTKGGYRSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 29 ESR1 Reverse Complement Original Motif Backward 8 13 1.03254 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: --VDBHMAGGTCACCCTGACCY GYRYCCMTKGGYRSC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 RREB1 Reverse Complement Reverse Complement Forward 8 13 1.04952 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: BGRRRGRGGRTGRTTYGGGG-- -------GYRYCCMTKGGYRSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 35 INSM1 Original Motif Original Motif Backward 1 12 1.54193 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: ---TGYCAGGGGGCR GSMMCCYARGGKKKC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 48 Tcfcp2l1 Reverse Complement Reverse Complement Forward 4 11 2.04218 Consensus sequence (original motif): CCAGYYHVADCCRG Consensus sequence (reverse complement motif): CKGGDTBDMMCTGG Alignment: CKGGDTBDMMCTGG---- ---GYRYCCMTKGGYRSC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 14 Motif name: ZEB1 Consensus sequence (original motif): CACCTD Consensus sequence (reverse complement motif): HAGGTG ************************************************************************ Best Matches for Motif ID 14 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 46 RORA_1 Original Motif Reverse Complement Backward 4 6 0.0141289 Consensus sequence (original motif): AWVDAGGTCA Consensus sequence (reverse complement motif): TGACCTDVWT Alignment: TGACCTDVWT -CACCTD--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 REST Reverse Complement Reverse Complement Backward 6 6 0.0143133 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA ----------HAGGTG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 31 Esrrb Original Motif Reverse Complement Backward 1 6 0.0207244 Consensus sequence (original motif): CACGTG Consensus sequence (reverse complement motif): CACGTG Alignment: CACGTG CACCTD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 25 Arnt Reverse Complement Original Motif Forward 1 6 0.0207244 Consensus sequence (original motif): CACGTG Consensus sequence (reverse complement motif): CACGTG Alignment: CACGTG HAGGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 43 NR1H2RXRA Original Motif Reverse Complement Backward 2 6 0.0232753 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: GTTGACCTTTGACCTTT ----------CACCTD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 33 HIF1AARNT Original Motif Reverse Complement Backward 2 6 0.0237889 Consensus sequence (original motif): VBACGTGV Consensus sequence (reverse complement motif): VCACGTBV Alignment: VCACGTBV -CACCTD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 35 INSM1 Reverse Complement Original Motif Backward 4 6 0.0262123 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: TGYCAGGGGGCR ---HAGGTG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 PPARGRXRA Original Motif Reverse Complement Backward 9 6 0.0264837 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: TGRCCTKTGHCCKAB -CACCTD-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 39 MYCMAX Original Motif Reverse Complement Backward 4 6 0.0269744 Consensus sequence (original motif): RASCACGTGGT Consensus sequence (reverse complement motif): ACCACGTGSTM Alignment: ACCACGTGSTM --CACCTD--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 44 NR4A2 Original Motif Reverse Complement Backward 1 6 0.0288897 Consensus sequence (original motif): AAGGTCAC Consensus sequence (reverse complement motif): GTGACCTT Alignment: GTGACCTT --CACCTD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 15 Motif name: TFAP2A Consensus sequence (original motif): GCCBBVRGS Consensus sequence (reverse complement motif): SCMVBBGGC ************************************************************************ Best Matches for Motif ID 15 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 12 Zfx Reverse Complement Original Motif Backward 3 9 0.0131247 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV ---SCMVBBGGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 21 PLAG1 Original Motif Original Motif Forward 4 9 0.0414588 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: GGGGCCCAAGGGGG ---GCCBBVRGS-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 13 Zfp423 Reverse Complement Reverse Complement Backward 4 9 0.0438157 Consensus sequence (original motif): GSMMCCYARGGKKKC Consensus sequence (reverse complement motif): GYRYCCMTKGGYRSC Alignment: GYRYCCMTKGGYRSC ---SCMVBBGGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 29 ESR1 Original Motif Reverse Complement Backward 2 9 0.0450672 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV ----------GCCBBVRGS- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 30 ESR2 Reverse Complement Reverse Complement Forward 6 9 0.0531668 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: BAGGYCABHBTGACCKHV -----SCMVBBGGC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 40 Mycn Reverse Complement Original Motif Forward 2 9 0.0550803 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: HSCACGTGGC -SCMVBBGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 45 Pax5 Original Motif Reverse Complement Forward 8 9 0.0581255 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD -------GCCBBVRGS---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 47 RXRRAR_DR5 Original Motif Original Motif Backward 7 9 0.0606062 Consensus sequence (original motif): RGKTCABVVRGAGGTCA Consensus sequence (reverse complement motif): TGACCTCKVVBTGAYCK Alignment: RGKTCABVVRGAGGTCA --GCCBBVRGS------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 38 Myc Reverse Complement Original Motif Forward 2 9 0.0613455 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: VGCACGTGGH -SCMVBBGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 48 Tcfcp2l1 Original Motif Original Motif Backward 3 9 0.0631412 Consensus sequence (original motif): CCAGYYHVADCCRG Consensus sequence (reverse complement motif): CKGGDTBDMMCTGG Alignment: CCAGYYHVADCCRG ---GCCBBVRGS-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 16 Motif name: SP1 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG ************************************************************************ Best Matches for Motif ID 16 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 RREB1 Reverse Complement Reverse Complement Forward 2 10 0.0646465 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: BGRRRGRGGRTGRTTYGGGG -GGGGGYGGGG--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 12 Zfx Reverse Complement Original Motif Backward 1 10 0.0664832 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV ----GGGGGYGGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 21 PLAG1 Original Motif Reverse Complement Forward 2 10 0.0725 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: CCCCCTTGGGCCCC -CCCCKCCCCC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 PPARGRXRA Original Motif Reverse Complement Backward 4 10 0.0731995 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: TGRCCTKTGHCCKAB --CCCCKCCCCC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 36 Klf4 Original Motif Reverse Complement Backward 1 10 0.0761191 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: GCCYCMCCCD CCCCKCCCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 28 Egr1 Reverse Complement Original Motif Forward 1 10 0.0798413 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: HGCGTGGGCGK GGGGGYGGGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 45 Pax5 Reverse Complement Original Motif Forward 8 10 0.0846627 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR -------GGGGGYGGGG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 41 MZF1_5-13 Reverse Complement Original Motif Forward 1 10 0.0884127 Consensus sequence (original motif): BKAGGGGDAD Consensus sequence (reverse complement motif): BTHCCCCTYB Alignment: BKAGGGGDAD GGGGGYGGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 35 INSM1 Reverse Complement Original Motif Backward 3 10 0.089127 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: TGYCAGGGGGCR GGGGGYGGGG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 32 EWSR1-FLI1 Original Motif Reverse Complement Forward 4 10 0.0893651 Consensus sequence (original motif): GGAAGGAAGGAAGGAAGG Consensus sequence (reverse complement motif): CCTTCCTTCCTTCCTTCC Alignment: CCTTCCTTCCTTCCTTCC ---CCCCKCCCCC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 17 Motif name: RXRAVDR Consensus sequence (original motif): GGGTCAWBGRGTTCA Consensus sequence (reverse complement motif): TGAACKCBWTGACCC ************************************************************************ Best Matches for Motif ID 17 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 24 Ar Reverse Complement Original Motif Backward 5 15 0.0566667 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: HWDAGHACRHHVTGTHCCHVMV ---TGAACKCBWTGACCC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 30 ESR2 Original Motif Original Motif Forward 3 15 0.0617507 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: VHRGGTCABDBTGMCCTB --GGGTCAWBGRGTTCA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 47 RXRRAR_DR5 Original Motif Original Motif Backward 3 15 0.062029 Consensus sequence (original motif): RGKTCABVVRGAGGTCA Consensus sequence (reverse complement motif): TGACCTCKVVBTGAYCK Alignment: RGKTCABVVRGAGGTCA GGGTCAWBGRGTTCA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 29 ESR1 Reverse Complement Original Motif Backward 1 15 0.0714525 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY -----TGAACKCBWTGACCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 13 Zfp423 Reverse Complement Original Motif Forward 1 15 0.0849495 Consensus sequence (original motif): GSMMCCYARGGKKKC Consensus sequence (reverse complement motif): GYRYCCMTKGGYRSC Alignment: GSMMCCYARGGKKKC TGAACKCBWTGACCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 43 NR1H2RXRA Original Motif Original Motif Forward 3 15 0.0866667 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC --GGGTCAWBGRGTTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 21 PLAG1 Original Motif Original Motif Forward 2 13 1.06201 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: GGGGCCCAAGGGGG-- -GGGTCAWBGRGTTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 PPARGRXRA Original Motif Original Motif Forward 3 13 1.07837 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA-- --GGGTCAWBGRGTTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 34 HNF4A Original Motif Original Motif Forward 1 13 1.0801 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: RGGBCAAAGKYCA-- GGGTCAWBGRGTTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 22 NR2F1 Original Motif Reverse Complement Forward 2 13 1.08482 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: AKGYYCAAAGRTCA-- -GGGTCAWBGRGTTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 18 Motif name: RREB1 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG ************************************************************************ Best Matches for Motif ID 18 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 29 ESR1 Reverse Complement Reverse Complement Backward 2 19 0.0874679 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: -MGGTCAGGGTGACCTRDBHV BGRRRGRGGRTGRTTYGGGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 24 Ar Original Motif Original Motif Backward 4 19 0.0927532 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: -HWDAGHACRHHVTGTHCCHVMV CCCCMAAMCAMCCMCMMMCV--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 30 ESR2 Reverse Complement Reverse Complement Forward 1 18 0.593122 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: BAGGYCABHBTGACCKHV-- BGRRRGRGGRTGRTTYGGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 45 Pax5 Reverse Complement Original Motif Backward 4 17 1.09431 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: ---DGVBCABTGDWGCGKRRCSR BGRRRGRGGRTGRTTYGGGG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 21 PLAG1 Original Motif Reverse Complement Forward 1 14 2.5804 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: CCCCCTTGGGCCCC------ CCCCMAAMCAMCCMCMMMCV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 9 Motif 9 Original Motif Original Motif Backward 1 14 2.58596 Consensus sequence (original motif): CACACAVRCACACA Consensus sequence (reverse complement motif): TGTGTGKVTGTGTG Alignment: ------CACACAVRCACACA CCCCMAAMCAMCCMCMMMCV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 11 Motif 11 Original Motif Original Motif Backward 1 14 2.59077 Consensus sequence (original motif): CAYACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTKTG Alignment: ------CAYACACACACACA CCCCMAAMCAMCCMCMMMCV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 47 RXRRAR_DR5 Reverse Complement Original Motif Forward 5 13 3.07964 Consensus sequence (original motif): RGKTCABVVRGAGGTCA Consensus sequence (reverse complement motif): TGACCTCKVVBTGAYCK Alignment: RGKTCABVVRGAGGTCA------- ----BGRRRGRGGRTGRTTYGGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 PPARGRXRA Reverse Complement Original Motif Forward 3 13 3.08033 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA------- --BGRRRGRGGRTGRTTYGGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 48 Tcfcp2l1 Original Motif Original Motif Backward 2 13 3.08771 Consensus sequence (original motif): CCAGYYHVADCCRG Consensus sequence (reverse complement motif): CKGGDTBDMMCTGG Alignment: -------CCAGYYHVADCCRG CCCCMAAMCAMCCMCMMMCV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 19 Motif name: REST Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA ************************************************************************ Best Matches for Motif ID 19 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 24 Ar Reverse Complement Reverse Complement Backward 1 21 0.0685835 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: VRVDGGHACAVDDKGTHCTDWH -GGYGCTGTCCATGGTGCTGAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 45 Pax5 Reverse Complement Reverse Complement Forward 3 18 1.577 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD--- --GGYGCTGTCCATGGTGCTGAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 29 ESR1 Original Motif Original Motif Backward 5 16 2.56863 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: -----VDBHMAGGTCACCCTGACCY TTCAGCACCATGGACAGCKCC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 30 ESR2 Reverse Complement Reverse Complement Forward 6 13 4.05754 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: BAGGYCABHBTGACCKHV-------- -----GGYGCTGTCCATGGTGCTGAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 34 HNF4A Reverse Complement Reverse Complement Forward 1 13 4.06973 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: TGMYCTTTGBCCK-------- GGYGCTGTCCATGGTGCTGAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 PPARGRXRA Original Motif Original Motif Backward 3 13 4.07172 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: --------BTRGGDCARAGGKCA TTCAGCACCATGGACAGCKCC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 48 Tcfcp2l1 Reverse Complement Original Motif Forward 3 12 4.57098 Consensus sequence (original motif): CCAGYYHVADCCRG Consensus sequence (reverse complement motif): CKGGDTBDMMCTGG Alignment: CCAGYYHVADCCRG--------- --GGYGCTGTCCATGGTGCTGAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 12 Zfx Reverse Complement Original Motif Backward 3 12 4.57482 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: ---------BBVGCCBVGGCCTV GGYGCTGTCCATGGTGCTGAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 17 RXRAVDR Reverse Complement Reverse Complement Forward 5 11 5.05758 Consensus sequence (original motif): GGGTCAWBGRGTTCA Consensus sequence (reverse complement motif): TGAACKCBWTGACCC Alignment: TGAACKCBWTGACCC---------- ----GGYGCTGTCCATGGTGCTGAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 47 RXRRAR_DR5 Reverse Complement Reverse Complement Forward 7 11 5.05947 Consensus sequence (original motif): RGKTCABVVRGAGGTCA Consensus sequence (reverse complement motif): TGACCTCKVVBTGAYCK Alignment: TGACCTCKVVBTGAYCK---------- ------GGYGCTGTCCATGGTGCTGAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 20 Motif name: PPARGRXRA Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB ************************************************************************ Best Matches for Motif ID 20 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 43 NR1H2RXRA Original Motif Original Motif Backward 3 15 0.0442974 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC BTRGGDCARAGGKCA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 47 RXRRAR_DR5 Original Motif Original Motif Backward 1 15 0.0500583 Consensus sequence (original motif): RGKTCABVVRGAGGTCA Consensus sequence (reverse complement motif): TGACCTCKVVBTGAYCK Alignment: RGKTCABVVRGAGGTCA --BTRGGDCARAGGKCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 30 ESR2 Original Motif Original Motif Backward 4 15 0.0602408 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: VHRGGTCABDBTGMCCTB BTRGGDCARAGGKCA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 24 Ar Reverse Complement Original Motif Forward 8 15 0.0714981 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: HWDAGHACRHHVTGTHCCHVMV -------TGRCCTKTGHCCKAB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 45 Pax5 Reverse Complement Reverse Complement Backward 3 15 0.0720255 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD ---TGRCCTKTGHCCKAB-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 29 ESR1 Original Motif Original Motif Backward 3 15 0.0723092 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY ---BTRGGDCARAGGKCA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 RREB1 Reverse Complement Original Motif Forward 2 15 0.0755648 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: CCCCMAAMCAMCCMCMMMCV -TGRCCTKTGHCCKAB---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 REST Original Motif Original Motif Forward 2 15 0.0796159 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC -BTRGGDCARAGGKCA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 22 NR2F1 Reverse Complement Original Motif Forward 1 14 0.536521 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: TGAMCTTTGMMCYT- TGRCCTKTGHCCKAB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 21 PLAG1 Original Motif Original Motif Backward 1 14 0.575248 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: -GGGGCCCAAGGGGG BTRGGDCARAGGKCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 21 Motif name: PLAG1 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC ************************************************************************ Best Matches for Motif ID 21 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 13 Zfp423 Original Motif Original Motif Forward 1 14 0.0944264 Consensus sequence (original motif): GSMMCCYARGGKKKC Consensus sequence (reverse complement motif): GYRYCCMTKGGYRSC Alignment: GSMMCCYARGGKKKC GGGGCCCAAGGGGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 RREB1 Original Motif Reverse Complement Backward 7 14 0.102814 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: BGRRRGRGGRTGRTTYGGGG GGGGCCCAAGGGGG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 PPARGRXRA Original Motif Original Motif Forward 2 14 0.107206 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA -GGGGCCCAAGGGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 12 Zfx Original Motif Reverse Complement Forward 1 14 0.111315 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: VAGGCCBBGGCVBB GGGGCCCAAGGGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 48 Tcfcp2l1 Reverse Complement Original Motif Backward 1 14 0.115151 Consensus sequence (original motif): CCAGYYHVADCCRG Consensus sequence (reverse complement motif): CKGGDTBDMMCTGG Alignment: CCAGYYHVADCCRG CCCCCTTGGGCCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 47 RXRRAR_DR5 Original Motif Original Motif Backward 4 14 0.116287 Consensus sequence (original motif): RGKTCABVVRGAGGTCA Consensus sequence (reverse complement motif): TGACCTCKVVBTGAYCK Alignment: RGKTCABVVRGAGGTCA GGGGCCCAAGGGGG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 45 Pax5 Original Motif Original Motif Forward 1 14 0.117063 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR GGGGCCCAAGGGGG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 17 RXRAVDR Original Motif Original Motif Backward 3 13 0.590064 Consensus sequence (original motif): GGGTCAWBGRGTTCA Consensus sequence (reverse complement motif): TGAACKCBWTGACCC Alignment: -GGGTCAWBGRGTTCA GGGGCCCAAGGGGG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 34 HNF4A Original Motif Original Motif Backward 1 13 0.603385 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: -RGGBCAAAGKYCA GGGGCCCAAGGGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 22 NR2F1 Original Motif Reverse Complement Backward 2 13 0.613207 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: -AKGYYCAAAGRTCA GGGGCCCAAGGGGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 22 Motif name: NR2F1 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA ************************************************************************ Best Matches for Motif ID 22 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 43 NR1H2RXRA Original Motif Reverse Complement Backward 2 14 0.0174588 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: GTTGACCTTTGACCTTT --TGAMCTTTGMMCYT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 PPARGRXRA Reverse Complement Original Motif Backward 2 14 0.0278283 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA AKGYYCAAAGRTCA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 47 RXRRAR_DR5 Reverse Complement Original Motif Backward 1 14 0.0625328 Consensus sequence (original motif): RGKTCABVVRGAGGTCA Consensus sequence (reverse complement motif): TGACCTCKVVBTGAYCK Alignment: RGKTCABVVRGAGGTCA ---AKGYYCAAAGRTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 30 ESR2 Original Motif Reverse Complement Backward 2 14 0.0710475 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: BAGGYCABHBTGACCKHV ---TGAMCTTTGMMCYT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 REST Original Motif Reverse Complement Backward 6 14 0.071796 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA --TGAMCTTTGMMCYT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 45 Pax5 Original Motif Reverse Complement Forward 5 14 0.0741987 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD ----TGAMCTTTGMMCYT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 34 HNF4A Reverse Complement Original Motif Backward 1 13 0.514048 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: -RGGBCAAAGKYCA AKGYYCAAAGRTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 12 Zfx Reverse Complement Original Motif Forward 2 13 0.568042 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV- -AKGYYCAAAGRTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 29 ESR1 Original Motif Original Motif Forward 8 13 0.569869 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY- -------TGAMCTTTGMMCYT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 17 RXRAVDR Original Motif Reverse Complement Backward 3 13 0.572226 Consensus sequence (original motif): GGGTCAWBGRGTTCA Consensus sequence (reverse complement motif): TGAACKCBWTGACCC Alignment: -TGAACKCBWTGACCC TGAMCTTTGMMCYT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 23 Motif name: MZF1_1-4 Consensus sequence (original motif): BGGGGA Consensus sequence (reverse complement motif): TCCCCV ************************************************************************ Best Matches for Motif ID 23 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 35 INSM1 Reverse Complement Reverse Complement Forward 3 6 0.0276389 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: MGCCCCCTGMCA --TCCCCV---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 41 MZF1_5-13 Original Motif Original Motif Forward 4 6 0.0314583 Consensus sequence (original motif): BKAGGGGDAD Consensus sequence (reverse complement motif): BTHCCCCTYB Alignment: BKAGGGGDAD ---BGGGGA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 36 Klf4 Reverse Complement Reverse Complement Forward 1 6 0.0406514 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: GCCYCMCCCD TCCCCV---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 21 PLAG1 Original Motif Original Motif Forward 9 6 0.0412963 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: GGGGCCCAAGGGGG --------BGGGGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 8 Motif 8 Reverse Complement Reverse Complement Forward 1 6 0.0426517 Consensus sequence (original motif): CTGGGA Consensus sequence (reverse complement motif): TCCCAG Alignment: TCCCAG TCCCCV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 16 SP1 Original Motif Reverse Complement Forward 5 6 0.0464881 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: GGGGGYGGGG ----BGGGGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 RREB1 Reverse Complement Original Motif Forward 5 6 0.0493561 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: CCCCMAAMCAMCCMCMMMCV ----TCCCCV---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 42 NFKB1 Reverse Complement Original Motif Forward 6 6 0.0521759 Consensus sequence (original motif): GGGGRTTCCCC Consensus sequence (reverse complement motif): GGGGAAKCCCC Alignment: GGGGRTTCCCC -----TCCCCV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 REST Reverse Complement Reverse Complement Backward 11 6 0.0581528 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA -----TCCCCV---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 24 Ar Reverse Complement Original Motif Backward 3 6 0.0585417 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: HWDAGHACRHHVTGTHCCHVMV --------------TCCCCV-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 24 Motif name: Ar Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH ************************************************************************ Best Matches for Motif ID 24 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 REST Reverse Complement Reverse Complement Backward 1 21 0.0696331 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: -GGYGCTGTCCATGGTGCTGAA VRVDGGHACAVDDKGTHCTDWH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 45 Pax5 Reverse Complement Reverse Complement Backward 1 20 0.564914 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: --MSGKKRCGCWDCABTGBBCD VRVDGGHACAVDDKGTHCTDWH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 29 ESR1 Reverse Complement Original Motif Forward 2 19 1.05195 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY--- -VRVDGGHACAVDDKGTHCTDWH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 RREB1 Original Motif Original Motif Forward 2 19 1.07661 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: CCCCMAAMCAMCCMCMMMCV--- -HWDAGHACRHHVTGTHCCHVMV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 PPARGRXRA Reverse Complement Original Motif Backward 1 15 3.0649 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: -------BTRGGDCARAGGKCA VRVDGGHACAVDDKGTHCTDWH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 30 ESR2 Reverse Complement Original Motif Backward 5 14 3.57597 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: --------VHRGGTCABDBTGMCCTB VRVDGGHACAVDDKGTHCTDWH---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 34 HNF4A Original Motif Reverse Complement Backward 1 13 4.07506 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: ---------TGMYCTTTGBCCK HWDAGHACRHHVTGTHCCHVMV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 10 Motif 10 Original Motif Reverse Complement Backward 2 13 4.07511 Consensus sequence (original motif): TKKTTTGTTTTTTT Consensus sequence (reverse complement motif): AAAAAAACAAARRA Alignment: ---------AAAAAAACAAARRA HWDAGHACRHHVTGTHCCHVMV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 48 Tcfcp2l1 Reverse Complement Reverse Complement Forward 2 13 4.0791 Consensus sequence (original motif): CCAGYYHVADCCRG Consensus sequence (reverse complement motif): CKGGDTBDMMCTGG Alignment: CKGGDTBDMMCTGG--------- -VRVDGGHACAVDDKGTHCTDWH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 9 Motif 9 Original Motif Reverse Complement Forward 3 12 4.57405 Consensus sequence (original motif): CACACAVRCACACA Consensus sequence (reverse complement motif): TGTGTGKVTGTGTG Alignment: TGTGTGKVTGTGTG---------- --HWDAGHACRHHVTGTHCCHVMV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 25 Motif name: Arnt Consensus sequence (original motif): CACGTG Consensus sequence (reverse complement motif): CACGTG ************************************************************************ Best Matches for Motif ID 25 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 31 Esrrb Original Motif Original Motif Forward 1 6 0 Consensus sequence (original motif): CACGTG Consensus sequence (reverse complement motif): CACGTG Alignment: CACGTG CACGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 39 MYCMAX Original Motif Original Motif Backward 3 6 0.0143849 Consensus sequence (original motif): RASCACGTGGT Consensus sequence (reverse complement motif): ACCACGTGSTM Alignment: RASCACGTGGT ---CACGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 38 Myc Original Motif Original Motif Forward 3 6 0.0267529 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: VGCACGTGGH --CACGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 40 Mycn Reverse Complement Reverse Complement Backward 3 6 0.0272641 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: GCCACGTGSD --CACGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 33 HIF1AARNT Original Motif Original Motif Backward 2 6 0.0347756 Consensus sequence (original motif): VBACGTGV Consensus sequence (reverse complement motif): VCACGTBV Alignment: VBACGTGV -CACGTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 26 ArntAhr Original Motif Original Motif Forward 1 6 0.065625 Consensus sequence (original motif): YGCGTG Consensus sequence (reverse complement motif): CACGCM Alignment: YGCGTG CACGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 14 ZEB1 Reverse Complement Original Motif Forward 1 6 0.0689533 Consensus sequence (original motif): CACCTD Consensus sequence (reverse complement motif): HAGGTG Alignment: CACCTD CACGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 28 Egr1 Original Motif Original Motif Forward 1 6 0.0784722 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: HGCGTGGGCGK CACGTG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 37 MIZF Original Motif Original Motif Backward 4 6 0.0854167 Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV Alignment: BAACGTCCGC -CACGTG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 21 PLAG1 Original Motif Original Motif Forward 7 6 0.105093 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: GGGGCCCAAGGGGG ------CACGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 26 Motif name: ArntAhr Consensus sequence (original motif): YGCGTG Consensus sequence (reverse complement motif): CACGCM ************************************************************************ Best Matches for Motif ID 26 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 28 Egr1 Original Motif Original Motif Forward 1 6 0 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: HGCGTGGGCGK YGCGTG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 33 HIF1AARNT Original Motif Original Motif Backward 2 6 0.0112447 Consensus sequence (original motif): VBACGTGV Consensus sequence (reverse complement motif): VCACGTBV Alignment: VBACGTGV -YGCGTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 11 Motif 11 Original Motif Reverse Complement Forward 7 6 0.0308396 Consensus sequence (original motif): CAYACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTKTG Alignment: TGTGTGTGTGTKTG ------YGCGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 31 Esrrb Original Motif Original Motif Backward 1 6 0.0315972 Consensus sequence (original motif): CACGTG Consensus sequence (reverse complement motif): CACGTG Alignment: CACGTG YGCGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 25 Arnt Original Motif Original Motif Forward 1 6 0.0315972 Consensus sequence (original motif): CACGTG Consensus sequence (reverse complement motif): CACGTG Alignment: CACGTG YGCGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 9 Motif 9 Reverse Complement Original Motif Forward 9 6 0.0350575 Consensus sequence (original motif): CACACAVRCACACA Consensus sequence (reverse complement motif): TGTGTGKVTGTGTG Alignment: CACACAVRCACACA --------CACGCM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 39 MYCMAX Original Motif Original Motif Forward 4 6 0.0376488 Consensus sequence (original motif): RASCACGTGGT Consensus sequence (reverse complement motif): ACCACGTGSTM Alignment: RASCACGTGGT ---YGCGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 40 Mycn Original Motif Reverse Complement Forward 3 6 0.0377949 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: GCCACGTGSD --YGCGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 38 Myc Original Motif Reverse Complement Backward 3 6 0.0399214 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: DCCACGTGCV --YGCGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 RREB1 Original Motif Reverse Complement Backward 7 6 0.0433081 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: BGRRRGRGGRTGRTTYGGGG --------YGCGTG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 27 Motif name: E2F1 Consensus sequence (original motif): TTTSGCGC Consensus sequence (reverse complement motif): GCGCSAAA ************************************************************************ Best Matches for Motif ID 27 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 21 PLAG1 Original Motif Reverse Complement Forward 2 8 0.0255644 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: CCCCCTTGGGCCCC -TTTSGCGC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 PPARGRXRA Original Motif Reverse Complement Backward 6 8 0.0280436 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: TGRCCTKTGHCCKAB --TTTSGCGC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 34 HNF4A Reverse Complement Original Motif Forward 1 8 0.0283733 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: RGGBCAAAGKYCA GCGCSAAA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 43 NR1H2RXRA Reverse Complement Original Motif Forward 3 8 0.0298005 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC --GCGCSAAA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 22 NR2F1 Original Motif Original Motif Backward 2 8 0.0369159 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: TGAMCTTTGMMCYT -----TTTSGCGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 13 Zfp423 Reverse Complement Original Motif Forward 7 8 0.0423573 Consensus sequence (original motif): GSMMCCYARGGKKKC Consensus sequence (reverse complement motif): GYRYCCMTKGGYRSC Alignment: GSMMCCYARGGKKKC ------GCGCSAAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 28 Egr1 Reverse Complement Reverse Complement Backward 4 8 0.0470922 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: YCGCCCACGCH GCGCSAAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 10 Motif 10 Original Motif Original Motif Backward 4 8 0.0486459 Consensus sequence (original motif): TKKTTTGTTTTTTT Consensus sequence (reverse complement motif): AAAAAAACAAARRA Alignment: TKKTTTGTTTTTTT ---TTTSGCGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 RREB1 Original Motif Reverse Complement Backward 13 8 0.0497437 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: BGRRRGRGGRTGRTTYGGGG TTTSGCGC------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 1 Motif 1 Original Motif Reverse Complement Backward 1 6 1.03392 Consensus sequence (original motif): RGGAAR Consensus sequence (reverse complement motif): MTTCCK Alignment: --MTTCCK TTTSGCGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 28 Motif name: Egr1 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH ************************************************************************ Best Matches for Motif ID 28 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 RREB1 Original Motif Reverse Complement Backward 3 11 0.0550907 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: BGRRRGRGGRTGRTTYGGGG -------HGCGTGGGCGK-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 11 Motif 11 Reverse Complement Original Motif Forward 1 11 0.062391 Consensus sequence (original motif): CAYACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTKTG Alignment: CAYACACACACACA YCGCCCACGCH--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 9 Motif 9 Reverse Complement Original Motif Forward 1 11 0.0668604 Consensus sequence (original motif): CACACAVRCACACA Consensus sequence (reverse complement motif): TGTGTGKVTGTGTG Alignment: CACACAVRCACACA YCGCCCACGCH--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 13 Zfp423 Reverse Complement Original Motif Backward 2 11 0.0673496 Consensus sequence (original motif): GSMMCCYARGGKKKC Consensus sequence (reverse complement motif): GYRYCCMTKGGYRSC Alignment: GSMMCCYARGGKKKC ---YCGCCCACGCH- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 12 Zfx Original Motif Original Motif Backward 2 11 0.0764878 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV --HGCGTGGGCGK- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 45 Pax5 Original Motif Original Motif Backward 6 11 0.0765783 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR ----HGCGTGGGCGK----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 35 INSM1 Original Motif Original Motif Forward 1 11 0.0830177 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: TGYCAGGGGGCR HGCGTGGGCGK- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 34 HNF4A Original Motif Reverse Complement Backward 1 11 0.0857144 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: TGMYCTTTGBCCK --HGCGTGGGCGK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 16 SP1 Reverse Complement Original Motif Forward 1 10 0.572401 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: CCCCKCCCCC- YCGCCCACGCH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 36 Klf4 Reverse Complement Reverse Complement Backward 1 10 0.580823 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: -GCCYCMCCCD YCGCCCACGCH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 29 Motif name: ESR1 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV ************************************************************************ Best Matches for Motif ID 29 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 45 Pax5 Reverse Complement Reverse Complement Backward 1 20 0.0624908 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD MGGTCAGGGTGACCTRDBHV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 24 Ar Reverse Complement Original Motif Backward 4 19 0.556363 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: -HWDAGHACRHHVTGTHCCHVMV MGGTCAGGGTGACCTRDBHV--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 RREB1 Reverse Complement Reverse Complement Forward 2 19 0.575732 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: BGRRRGRGGRTGRTTYGGGG- -MGGTCAGGGTGACCTRDBHV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 30 ESR2 Original Motif Original Motif Backward 2 17 1.50287 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: ---VHRGGTCABDBTGMCCTB VDBHMAGGTCACCCTGACCY- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 47 RXRRAR_DR5 Original Motif Reverse Complement Backward 1 17 1.55839 Consensus sequence (original motif): RGKTCABVVRGAGGTCA Consensus sequence (reverse complement motif): TGACCTCKVVBTGAYCK Alignment: ---TGACCTCKVVBTGAYCK VDBHMAGGTCACCCTGACCY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 REST Original Motif Original Motif Forward 6 16 2.07409 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC---- -----VDBHMAGGTCACCCTGACCY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 17 RXRAVDR Reverse Complement Original Motif Backward 1 15 2.56536 Consensus sequence (original motif): GGGTCAWBGRGTTCA Consensus sequence (reverse complement motif): TGAACKCBWTGACCC Alignment: -----GGGTCAWBGRGTTCA MGGTCAGGGTGACCTRDBHV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 PPARGRXRA Original Motif Reverse Complement Backward 2 14 3.07055 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: ------TGRCCTKTGHCCKAB VDBHMAGGTCACCCTGACCY- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 12 Zfx Reverse Complement Reverse Complement Forward 2 13 3.56429 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: VAGGCCBBGGCVBB------- -MGGTCAGGGTGACCTRDBHV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 13 Zfp423 Reverse Complement Original Motif Forward 3 13 3.56489 Consensus sequence (original motif): GSMMCCYARGGKKKC Consensus sequence (reverse complement motif): GYRYCCMTKGGYRSC Alignment: GSMMCCYARGGKKKC------- --MGGTCAGGGTGACCTRDBHV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 30 Motif name: ESR2 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV ************************************************************************ Best Matches for Motif ID 30 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 24 Ar Reverse Complement Original Motif Forward 3 18 0.0488603 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: HWDAGHACRHHVTGTHCCHVMV --BAGGYCABHBTGACCKHV-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 45 Pax5 Reverse Complement Reverse Complement Backward 3 18 0.0851144 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD BAGGYCABHBTGACCKHV-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 RREB1 Reverse Complement Reverse Complement Backward 3 18 0.0903249 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: BGRRRGRGGRTGRTTYGGGG BAGGYCABHBTGACCKHV-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 REST Original Motif Reverse Complement Backward 3 18 0.0916961 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA -VHRGGTCABDBTGMCCTB-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 29 ESR1 Original Motif Original Motif Forward 4 17 0.511812 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY- ---VHRGGTCABDBTGMCCTB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 47 RXRRAR_DR5 Reverse Complement Original Motif Backward 1 17 0.570972 Consensus sequence (original motif): RGKTCABVVRGAGGTCA Consensus sequence (reverse complement motif): TGACCTCKVVBTGAYCK Alignment: -RGKTCABVVRGAGGTCA BAGGYCABHBTGACCKHV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 PPARGRXRA Original Motif Original Motif Forward 1 15 1.56699 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA--- VHRGGTCABDBTGMCCTB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 12 Zfx Reverse Complement Reverse Complement Forward 1 14 2.07891 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: VAGGCCBBGGCVBB---- BAGGYCABHBTGACCKHV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 22 NR2F1 Original Motif Original Motif Backward 1 14 2.08921 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: ----TGAMCTTTGMMCYT VHRGGTCABDBTGMCCTB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 48 Tcfcp2l1 Reverse Complement Original Motif Backward 1 14 2.09109 Consensus sequence (original motif): CCAGYYHVADCCRG Consensus sequence (reverse complement motif): CKGGDTBDMMCTGG Alignment: ----CCAGYYHVADCCRG BAGGYCABHBTGACCKHV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 31 Motif name: Esrrb Consensus sequence (original motif): CACGTG Consensus sequence (reverse complement motif): CACGTG ************************************************************************ Best Matches for Motif ID 31 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 25 Arnt Original Motif Original Motif Forward 1 6 0 Consensus sequence (original motif): CACGTG Consensus sequence (reverse complement motif): CACGTG Alignment: CACGTG CACGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 39 MYCMAX Original Motif Original Motif Backward 3 6 0.0143849 Consensus sequence (original motif): RASCACGTGGT Consensus sequence (reverse complement motif): ACCACGTGSTM Alignment: RASCACGTGGT ---CACGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 38 Myc Original Motif Original Motif Forward 3 6 0.0267529 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: VGCACGTGGH --CACGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 40 Mycn Reverse Complement Reverse Complement Backward 3 6 0.0272641 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: GCCACGTGSD --CACGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 33 HIF1AARNT Original Motif Original Motif Backward 2 6 0.0347756 Consensus sequence (original motif): VBACGTGV Consensus sequence (reverse complement motif): VCACGTBV Alignment: VBACGTGV -CACGTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 26 ArntAhr Original Motif Original Motif Forward 1 6 0.065625 Consensus sequence (original motif): YGCGTG Consensus sequence (reverse complement motif): CACGCM Alignment: YGCGTG CACGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 14 ZEB1 Original Motif Reverse Complement Backward 1 6 0.0689533 Consensus sequence (original motif): CACCTD Consensus sequence (reverse complement motif): HAGGTG Alignment: HAGGTG CACGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 28 Egr1 Original Motif Original Motif Backward 6 6 0.0784722 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: HGCGTGGGCGK CACGTG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 37 MIZF Original Motif Original Motif Backward 4 6 0.0854167 Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV Alignment: BAACGTCCGC -CACGTG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 21 PLAG1 Original Motif Original Motif Backward 3 6 0.105093 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: GGGGCCCAAGGGGG ------CACGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 32 Motif name: EWSR1-FLI1 Consensus sequence (original motif): GGAAGGAAGGAAGGAAGG Consensus sequence (reverse complement motif): CCTTCCTTCCTTCCTTCC ************************************************************************ Best Matches for Motif ID 32 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 43 NR1H2RXRA Original Motif Original Motif Backward 6 12 1.09472 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: ------AAAGGTCAAAGGTCAAC GGAAGGAAGGAAGGAAGG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 10 Motif 10 Reverse Complement Original Motif Backward 3 12 1.1007 Consensus sequence (original motif): TKKTTTGTTTTTTT Consensus sequence (reverse complement motif): AAAAAAACAAARRA Alignment: ------TKKTTTGTTTTTTT CCTTCCTTCCTTCCTTCC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 RREB1 Reverse Complement Original Motif Backward 11 10 2.09833 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: --------CCCCMAAMCAMCCMCMMMCV CCTTCCTTCCTTCCTTCC---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 16 SP1 Original Motif Reverse Complement Forward 2 9 2.58264 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: GGGGGYGGGG--------- -GGAAGGAAGGAAGGAAGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 37 MIZF Reverse Complement Original Motif Backward 3 8 3.0896 Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV Alignment: ----------BAACGTCCGC CCTTCCTTCCTTCCTTCC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 7 Motif 7 Reverse Complement Original Motif Backward 1 8 3.09107 Consensus sequence (original motif): CCCRCCCC Consensus sequence (reverse complement motif): GGGGMGGG Alignment: ----------CCCRCCCC CCTTCCTTCCTTCCTTCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 29 ESR1 Original Motif Reverse Complement Forward 13 8 3.09836 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV---------- ------------GGAAGGAAGGAAGGAAGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 36 Klf4 Original Motif Original Motif Backward 3 8 3.10206 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: ----------DGGGYGKGGC GGAAGGAAGGAAGGAAGG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 3 Motif 3 Original Motif Original Motif Backward 1 7 3.55161 Consensus sequence (original motif): AGSCWGG Consensus sequence (reverse complement motif): CCWGSCT Alignment: -----------AGSCWGG GGAAGGAAGGAAGGAAGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 46 RORA_1 Reverse Complement Reverse Complement Forward 4 7 3.58428 Consensus sequence (original motif): AWVDAGGTCA Consensus sequence (reverse complement motif): TGACCTDVWT Alignment: TGACCTDVWT----------- ---CCTTCCTTCCTTCCTTCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 33 Motif name: HIF1AARNT Consensus sequence (original motif): VBACGTGV Consensus sequence (reverse complement motif): VCACGTBV ************************************************************************ Best Matches for Motif ID 33 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 40 Mycn Original Motif Reverse Complement Forward 2 8 0.0228069 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: GCCACGTGSD -VBACGTGV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 38 Myc Original Motif Reverse Complement Forward 2 8 0.0249459 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: DCCACGTGCV -VBACGTGV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 39 MYCMAX Reverse Complement Reverse Complement Forward 2 8 0.0254922 Consensus sequence (original motif): RASCACGTGGT Consensus sequence (reverse complement motif): ACCACGTGSTM Alignment: ACCACGTGSTM -VCACGTBV-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 37 MIZF Reverse Complement Reverse Complement Forward 3 8 0.0482171 Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV Alignment: GCGGACGTTV --VCACGTBV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 24 Ar Original Motif Reverse Complement Forward 5 8 0.0533654 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: VRVDGGHACAVDDKGTHCTDWH ----VBACGTGV---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 45 Pax5 Reverse Complement Reverse Complement Backward 8 8 0.0661859 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD -----VCACGTBV------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 RREB1 Reverse Complement Original Motif Backward 8 8 0.0666776 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: CCCCMAAMCAMCCMCMMMCV -----VCACGTBV------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 41 MZF1_5-13 Original Motif Original Motif Backward 3 8 0.0703926 Consensus sequence (original motif): BKAGGGGDAD Consensus sequence (reverse complement motif): BTHCCCCTYB Alignment: BKAGGGGDAD VBACGTGV-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 30 ESR2 Original Motif Reverse Complement Backward 6 8 0.0716055 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: BAGGYCABHBTGACCKHV -----VBACGTGV----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 47 RXRRAR_DR5 Original Motif Reverse Complement Backward 4 8 0.0726789 Consensus sequence (original motif): RGKTCABVVRGAGGTCA Consensus sequence (reverse complement motif): TGACCTCKVVBTGAYCK Alignment: TGACCTCKVVBTGAYCK ------VBACGTGV--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 34 Motif name: HNF4A Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK ************************************************************************ Best Matches for Motif ID 34 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 PPARGRXRA Original Motif Original Motif Forward 3 13 0 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA --RGGBCAAAGKYCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 22 NR2F1 Reverse Complement Original Motif Forward 2 13 0.0227413 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: TGAMCTTTGMMCYT -TGMYCTTTGBCCK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 43 NR1H2RXRA Original Motif Original Motif Forward 3 13 0.0423023 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC --RGGBCAAAGKYCA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 47 RXRRAR_DR5 Reverse Complement Reverse Complement Forward 1 13 0.048852 Consensus sequence (original motif): RGKTCABVVRGAGGTCA Consensus sequence (reverse complement motif): TGACCTCKVVBTGAYCK Alignment: TGACCTCKVVBTGAYCK TGMYCTTTGBCCK---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 45 Pax5 Original Motif Reverse Complement Forward 8 13 0.063924 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD -------RGGBCAAAGKYCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 30 ESR2 Original Motif Original Motif Forward 3 13 0.0671615 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: VHRGGTCABDBTGMCCTB --RGGBCAAAGKYCA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 24 Ar Reverse Complement Reverse Complement Backward 4 13 0.067775 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: VRVDGGHACAVDDKGTHCTDWH ------TGMYCTTTGBCCK--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 29 ESR1 Reverse Complement Original Motif Forward 1 13 0.0711137 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY TGMYCTTTGBCCK------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 21 PLAG1 Original Motif Original Motif Backward 1 13 0.0714266 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: GGGGCCCAAGGGGG -RGGBCAAAGKYCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 REST Reverse Complement Reverse Complement Backward 4 13 0.0741922 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA -----TGMYCTTTGBCCK--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 35 Motif name: INSM1 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA ************************************************************************ Best Matches for Motif ID 35 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 PPARGRXRA Original Motif Original Motif Forward 4 12 0.0472454 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA ---TGYCAGGGGGCR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 RREB1 Original Motif Reverse Complement Backward 1 12 0.0499162 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: BGRRRGRGGRTGRTTYGGGG --------TGYCAGGGGGCR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 13 Zfp423 Reverse Complement Reverse Complement Backward 3 12 0.0538619 Consensus sequence (original motif): GSMMCCYARGGKKKC Consensus sequence (reverse complement motif): GYRYCCMTKGGYRSC Alignment: GYRYCCMTKGGYRSC -MGCCCCCTGMCA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 34 HNF4A Original Motif Original Motif Forward 2 12 0.0551858 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: RGGBCAAAGKYCA -TGYCAGGGGGCR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 29 ESR1 Original Motif Original Motif Forward 2 12 0.0630846 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY -TGYCAGGGGGCR------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 45 Pax5 Original Motif Original Motif Forward 6 12 0.0679087 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR -----TGYCAGGGGGCR--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 12 Zfx Reverse Complement Reverse Complement Backward 2 12 0.069037 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: VAGGCCBBGGCVBB -MGCCCCCTGMCA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 11 Motif 11 Reverse Complement Original Motif Forward 3 12 0.0692502 Consensus sequence (original motif): CAYACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTKTG Alignment: CAYACACACACACA --MGCCCCCTGMCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 43 NR1H2RXRA Original Motif Original Motif Backward 3 12 0.0696795 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC ---TGYCAGGGGGCR-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 22 NR2F1 Reverse Complement Original Motif Backward 1 12 0.0705128 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: TGAMCTTTGMMCYT --MGCCCCCTGMCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 36 Motif name: Klf4 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD ************************************************************************ Best Matches for Motif ID 36 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 RREB1 Original Motif Reverse Complement Backward 1 10 0.065355 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: BGRRRGRGGRTGRTTYGGGG ----------DGGGYGKGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 12 Zfx Reverse Complement Original Motif Backward 4 10 0.0734166 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV -GCCYCMCCCD--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 16 SP1 Original Motif Reverse Complement Backward 1 10 0.0773711 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: GGGGGYGGGG DGGGYGKGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 11 Motif 11 Reverse Complement Original Motif Forward 3 10 0.0781179 Consensus sequence (original motif): CAYACACACACACA Consensus sequence (reverse complement motif): TGTGTGTGTGTKTG Alignment: CAYACACACACACA --GCCYCMCCCD-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 35 INSM1 Reverse Complement Reverse Complement Backward 1 10 0.0785684 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: MGCCCCCTGMCA --GCCYCMCCCD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 38 Myc Original Motif Original Motif Backward 1 10 0.0797423 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: VGCACGTGGH DGGGYGKGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 45 Pax5 Original Motif Original Motif Forward 9 10 0.0806175 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR --------DGGGYGKGGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 40 Mycn Original Motif Original Motif Forward 1 10 0.080695 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: HSCACGTGGC DGGGYGKGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 48 Tcfcp2l1 Reverse Complement Original Motif Forward 4 10 0.0807235 Consensus sequence (original motif): CCAGYYHVADCCRG Consensus sequence (reverse complement motif): CKGGDTBDMMCTGG Alignment: CCAGYYHVADCCRG ---GCCYCMCCCD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 28 Egr1 Reverse Complement Reverse Complement Backward 1 10 0.089515 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: YCGCCCACGCH -GCCYCMCCCD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 37 Motif name: MIZF Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV ************************************************************************ Best Matches for Motif ID 37 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 39 MYCMAX Original Motif Reverse Complement Forward 2 10 0.0390724 Consensus sequence (original motif): RASCACGTGGT Consensus sequence (reverse complement motif): ACCACGTGSTM Alignment: ACCACGTGSTM -BAACGTCCGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 30 ESR2 Reverse Complement Reverse Complement Backward 1 10 0.0399477 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: BAGGYCABHBTGACCKHV --------GCGGACGTTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 29 ESR1 Original Motif Original Motif Backward 8 10 0.0408267 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY ---BAACGTCCGC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 24 Ar Original Motif Original Motif Backward 4 10 0.0432688 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: HWDAGHACRHHVTGTHCCHVMV ---------BAACGTCCGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 43 NR1H2RXRA Original Motif Original Motif Forward 8 10 0.0439771 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC -------BAACGTCCGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 REST Original Motif Reverse Complement Backward 3 10 0.0501848 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA ---------BAACGTCCGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 45 Pax5 Reverse Complement Reverse Complement Forward 2 10 0.0576438 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD -GCGGACGTTV--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 38 Myc Original Motif Reverse Complement Forward 2 9 0.535015 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: DCCACGTGCV- -BAACGTCCGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 28 Egr1 Original Motif Original Motif Backward 3 9 0.537968 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH Alignment: -HGCGTGGGCGK BAACGTCCGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 40 Mycn Original Motif Reverse Complement Forward 2 9 0.540549 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: GCCACGTGSD- -BAACGTCCGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 38 Motif name: Myc Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV ************************************************************************ Best Matches for Motif ID 38 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 40 Mycn Original Motif Original Motif Backward 1 10 0 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: HSCACGTGGC VGCACGTGGH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 39 MYCMAX Original Motif Original Motif Backward 1 10 0.0209359 Consensus sequence (original motif): RASCACGTGGT Consensus sequence (reverse complement motif): ACCACGTGSTM Alignment: RASCACGTGGT -VGCACGTGGH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 35 INSM1 Reverse Complement Reverse Complement Backward 2 10 0.0844808 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: MGCCCCCTGMCA -DCCACGTGCV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 36 Klf4 Original Motif Original Motif Backward 1 10 0.0883745 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: DGGGYGKGGC VGCACGTGGH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 12 Zfx Reverse Complement Reverse Complement Backward 2 10 0.0925451 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: VAGGCCBBGGCVBB ---DCCACGTGCV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 21 PLAG1 Original Motif Reverse Complement Forward 5 10 0.0930375 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: CCCCCTTGGGCCCC ----VGCACGTGGH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 13 Zfp423 Reverse Complement Reverse Complement Backward 3 10 0.0930519 Consensus sequence (original motif): GSMMCCYARGGKKKC Consensus sequence (reverse complement motif): GYRYCCMTKGGYRSC Alignment: GYRYCCMTKGGYRSC ---DCCACGTGCV-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 34 HNF4A Original Motif Reverse Complement Backward 1 10 0.0934488 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: TGMYCTTTGBCCK ---VGCACGTGGH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 29 ESR1 Reverse Complement Reverse Complement Backward 3 10 0.0940438 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV --------DCCACGTGCV-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 24 Ar Reverse Complement Original Motif Forward 7 10 0.0966137 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: HWDAGHACRHHVTGTHCCHVMV ------DCCACGTGCV------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 39 Motif name: MYCMAX Consensus sequence (original motif): RASCACGTGGT Consensus sequence (reverse complement motif): ACCACGTGSTM ************************************************************************ Best Matches for Motif ID 39 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 RREB1 Reverse Complement Original Motif Backward 7 11 0.0862644 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: CCCCMAAMCAMCCMCMMMCV ---ACCACGTGSTM------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 24 Ar Original Motif Original Motif Backward 10 11 0.0877525 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: HWDAGHACRHHVTGTHCCHVMV --RASCACGTGGT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 13 Zfp423 Reverse Complement Original Motif Forward 2 11 0.0933483 Consensus sequence (original motif): GSMMCCYARGGKKKC Consensus sequence (reverse complement motif): GYRYCCMTKGGYRSC Alignment: GSMMCCYARGGKKKC -ACCACGTGSTM--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 21 PLAG1 Reverse Complement Reverse Complement Forward 1 11 0.10358 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: CCCCCTTGGGCCCC ACCACGTGSTM--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 35 INSM1 Original Motif Original Motif Backward 2 11 0.104527 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: TGYCAGGGGGCR RASCACGTGGT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 REST Reverse Complement Reverse Complement Backward 3 11 0.105174 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA --------ACCACGTGSTM-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 30 ESR2 Original Motif Original Motif Forward 4 11 0.105681 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: VHRGGTCABDBTGMCCTB ---RASCACGTGGT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 29 ESR1 Reverse Complement Reverse Complement Backward 2 11 0.107782 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV --------ACCACGTGSTM- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 47 RXRRAR_DR5 Reverse Complement Reverse Complement Forward 3 11 0.108615 Consensus sequence (original motif): RGKTCABVVRGAGGTCA Consensus sequence (reverse complement motif): TGACCTCKVVBTGAYCK Alignment: TGACCTCKVVBTGAYCK --ACCACGTGSTM---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 12 Zfx Original Motif Original Motif Forward 1 11 0.110189 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV RASCACGTGGT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 40 Motif name: Mycn Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD ************************************************************************ Best Matches for Motif ID 40 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 38 Myc Original Motif Original Motif Backward 1 10 0 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: VGCACGTGGH HSCACGTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 39 MYCMAX Original Motif Original Motif Forward 2 10 0.0200467 Consensus sequence (original motif): RASCACGTGGT Consensus sequence (reverse complement motif): ACCACGTGSTM Alignment: RASCACGTGGT -HSCACGTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 35 INSM1 Reverse Complement Reverse Complement Backward 2 10 0.0834824 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: MGCCCCCTGMCA -GCCACGTGSD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 36 Klf4 Original Motif Original Motif Forward 1 10 0.0893272 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: DGGGYGKGGC HSCACGTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 29 ESR1 Reverse Complement Reverse Complement Backward 3 10 0.089863 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV --------GCCACGTGSD-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 12 Zfx Reverse Complement Reverse Complement Forward 4 10 0.0899944 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: VAGGCCBBGGCVBB ---GCCACGTGSD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 21 PLAG1 Original Motif Reverse Complement Forward 5 10 0.0921439 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: CCCCCTTGGGCCCC ----HSCACGTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 34 HNF4A Reverse Complement Reverse Complement Forward 2 10 0.0947124 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: TGMYCTTTGBCCK -GCCACGTGSD-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 PPARGRXRA Reverse Complement Reverse Complement Backward 5 10 0.0954444 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: TGRCCTKTGHCCKAB -GCCACGTGSD---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 30 ESR2 Original Motif Original Motif Forward 5 10 0.0964708 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: VHRGGTCABDBTGMCCTB ----HSCACGTGGC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 41 Motif name: MZF1_5-13 Consensus sequence (original motif): BKAGGGGDAD Consensus sequence (reverse complement motif): BTHCCCCTYB ************************************************************************ Best Matches for Motif ID 41 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 35 INSM1 Original Motif Original Motif Backward 1 10 0.0360532 Consensus sequence (original motif): TGYCAGGGGGCR Consensus sequence (reverse complement motif): MGCCCCCTGMCA Alignment: TGYCAGGGGGCR --BKAGGGGDAD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 45 Pax5 Original Motif Original Motif Backward 4 10 0.0428241 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR -------BKAGGGGDAD--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 PPARGRXRA Original Motif Original Motif Forward 1 10 0.0470779 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA BKAGGGGDAD----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 13 Zfp423 Original Motif Original Motif Forward 6 10 0.0524832 Consensus sequence (original motif): GSMMCCYARGGKKKC Consensus sequence (reverse complement motif): GYRYCCMTKGGYRSC Alignment: GSMMCCYARGGKKKC -----BKAGGGGDAD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 RREB1 Reverse Complement Original Motif Forward 2 10 0.0548506 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: CCCCMAAMCAMCCMCMMMCV -BTHCCCCTYB--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 34 HNF4A Reverse Complement Reverse Complement Forward 1 10 0.0568244 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: TGMYCTTTGBCCK BTHCCCCTYB--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 47 RXRRAR_DR5 Reverse Complement Reverse Complement Forward 1 10 0.0581547 Consensus sequence (original motif): RGKTCABVVRGAGGTCA Consensus sequence (reverse complement motif): TGACCTCKVVBTGAYCK Alignment: TGACCTCKVVBTGAYCK BTHCCCCTYB------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 24 Ar Original Motif Reverse Complement Forward 13 10 0.0610532 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: VRVDGGHACAVDDKGTHCTDWH ------------BKAGGGGDAD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 29 ESR1 Original Motif Original Motif Backward 9 10 0.0642057 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY --BKAGGGGDAD-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 16 SP1 Reverse Complement Original Motif Forward 1 10 0.0692824 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: CCCCKCCCCC BTHCCCCTYB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 42 Motif name: NFKB1 Consensus sequence (original motif): GGGGRTTCCCC Consensus sequence (reverse complement motif): GGGGAAKCCCC ************************************************************************ Best Matches for Motif ID 42 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 48 Tcfcp2l1 Original Motif Reverse Complement Backward 4 11 0.103405 Consensus sequence (original motif): CCAGYYHVADCCRG Consensus sequence (reverse complement motif): CKGGDTBDMMCTGG Alignment: CKGGDTBDMMCTGG GGGGRTTCCCC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 REST Reverse Complement Original Motif Forward 1 11 0.112926 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC GGGGAAKCCCC---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 45 Pax5 Reverse Complement Reverse Complement Backward 9 11 0.116162 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD -GGGGAAKCCCC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 RREB1 Reverse Complement Original Motif Backward 5 11 0.117826 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: CCCCMAAMCAMCCMCMMMCV -----GGGGAAKCCCC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 36 Klf4 Original Motif Reverse Complement Forward 1 10 0.616368 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: GCCYCMCCCD- GGGGRTTCCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 21 PLAG1 Original Motif Original Motif Backward 6 9 1.11497 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: --GGGGCCCAAGGGGG GGGGRTTCCCC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 16 SP1 Original Motif Reverse Complement Backward 2 9 1.11585 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG Alignment: --GGGGGYGGGG GGGGRTTCCCC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 7 Motif 7 Reverse Complement Reverse Complement Forward 1 8 1.59629 Consensus sequence (original motif): CCCRCCCC Consensus sequence (reverse complement motif): GGGGMGGG Alignment: GGGGMGGG--- GGGGAAKCCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 13 Zfp423 Original Motif Original Motif Forward 8 8 1.59848 Consensus sequence (original motif): GSMMCCYARGGKKKC Consensus sequence (reverse complement motif): GYRYCCMTKGGYRSC Alignment: GSMMCCYARGGKKKC--- -------GGGGRTTCCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 41 MZF1_5-13 Reverse Complement Original Motif Backward 3 8 1.61306 Consensus sequence (original motif): BKAGGGGDAD Consensus sequence (reverse complement motif): BTHCCCCTYB Alignment: ---BKAGGGGDAD GGGGAAKCCCC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 43 Motif name: NR1H2RXRA Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT ************************************************************************ Best Matches for Motif ID 43 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 REST Reverse Complement Reverse Complement Forward 4 17 0.0911991 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA ---GTTGACCTTTGACCTTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 PPARGRXRA Original Motif Original Motif Forward 1 15 1.05945 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA-- AAAGGTCAAAGGTCAAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 17 RXRAVDR Original Motif Original Motif Backward 1 15 1.09792 Consensus sequence (original motif): GGGTCAWBGRGTTCA Consensus sequence (reverse complement motif): TGAACKCBWTGACCC Alignment: --GGGTCAWBGRGTTCA AAAGGTCAAAGGTCAAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 29 ESR1 Original Motif Original Motif Backward 8 13 2.08514 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: ----VDBHMAGGTCACCCTGACCY AAAGGTCAAAGGTCAAC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 10 Motif 10 Reverse Complement Original Motif Forward 2 13 2.08845 Consensus sequence (original motif): TKKTTTGTTTTTTT Consensus sequence (reverse complement motif): AAAAAAACAAARRA Alignment: TKKTTTGTTTTTTT---- -GTTGACCTTTGACCTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 32 EWSR1-FLI1 Original Motif Original Motif Forward 7 12 2.59335 Consensus sequence (original motif): GGAAGGAAGGAAGGAAGG Consensus sequence (reverse complement motif): CCTTCCTTCCTTCCTTCC Alignment: GGAAGGAAGGAAGGAAGG----- ------AAAGGTCAAAGGTCAAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 24 Ar Reverse Complement Reverse Complement Forward 12 11 3.09595 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: VRVDGGHACAVDDKGTHCTDWH------ -----------GTTGACCTTTGACCTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 30 ESR2 Reverse Complement Reverse Complement Forward 9 10 3.56221 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: BAGGYCABHBTGACCKHV------- --------GTTGACCTTTGACCTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 37 MIZF Original Motif Original Motif Backward 1 10 3.5855 Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV Alignment: -------BAACGTCCGC AAAGGTCAAAGGTCAAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 9 Motif 9 Original Motif Original Motif Forward 5 10 3.59839 Consensus sequence (original motif): CACACAVRCACACA Consensus sequence (reverse complement motif): TGTGTGKVTGTGTG Alignment: CACACAVRCACACA------- ----AAAGGTCAAAGGTCAAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 44 Motif name: NR4A2 Consensus sequence (original motif): AAGGTCAC Consensus sequence (reverse complement motif): GTGACCTT ************************************************************************ Best Matches for Motif ID 44 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 43 NR1H2RXRA Original Motif Original Motif Backward 9 8 0.0167759 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC -AAGGTCAC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 29 ESR1 Original Motif Original Motif Forward 5 8 0.0195235 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY ----AAGGTCAC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 30 ESR2 Reverse Complement Reverse Complement Forward 10 8 0.0198372 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: BAGGYCABHBTGACCKHV ---------GTGACCTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 24 Ar Reverse Complement Reverse Complement Forward 13 8 0.0487608 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: VRVDGGHACAVDDKGTHCTDWH ------------GTGACCTT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 PPARGRXRA Original Motif Original Motif Backward 7 8 0.0495607 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA -AAGGTCAC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 22 NR2F1 Original Motif Reverse Complement Forward 7 8 0.0564874 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: AKGYYCAAAGRTCA ------AAGGTCAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 REST Original Motif Original Motif Backward 5 8 0.0594649 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC ---------AAGGTCAC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 12 Zfx Reverse Complement Original Motif Forward 1 8 0.0631514 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV GTGACCTT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 RREB1 Reverse Complement Reverse Complement Backward 4 8 0.0720656 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: BGRRRGRGGRTGRTTYGGGG ---------GTGACCTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 48 Tcfcp2l1 Reverse Complement Reverse Complement Backward 2 8 0.0740998 Consensus sequence (original motif): CCAGYYHVADCCRG Consensus sequence (reverse complement motif): CKGGDTBDMMCTGG Alignment: CKGGDTBDMMCTGG -----GTGACCTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 45 Motif name: Pax5 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD ************************************************************************ Best Matches for Motif ID 45 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 29 ESR1 Reverse Complement Reverse Complement Backward 1 20 0.0382347 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV MSGKKRCGCWDCABTGBBCD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 24 Ar Reverse Complement Reverse Complement Backward 1 20 0.0450685 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: VRVDGGHACAVDDKGTHCTDWH --MSGKKRCGCWDCABTGBBCD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 30 ESR2 Reverse Complement Reverse Complement Forward 1 18 1.05192 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: BAGGYCABHBTGACCKHV-- MSGKKRCGCWDCABTGBBCD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 REST Reverse Complement Reverse Complement Backward 4 18 1.0582 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: --GGYGCTGTCCATGGTGCTGAA MSGKKRCGCWDCABTGBBCD--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 47 RXRRAR_DR5 Reverse Complement Reverse Complement Backward 1 17 1.53818 Consensus sequence (original motif): RGKTCABVVRGAGGTCA Consensus sequence (reverse complement motif): TGACCTCKVVBTGAYCK Alignment: ---TGACCTCKVVBTGAYCK MSGKKRCGCWDCABTGBBCD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 RREB1 Reverse Complement Original Motif Forward 4 17 1.55831 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: CCCCMAAMCAMCCMCMMMCV--- ---MSGKKRCGCWDCABTGBBCD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 PPARGRXRA Original Motif Reverse Complement Backward 1 15 2.55126 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: -----TGRCCTKTGHCCKAB DGVBCABTGDWGCGKRRCSR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 21 PLAG1 Original Motif Original Motif Forward 1 14 3.05866 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: GGGGCCCAAGGGGG------ DGVBCABTGDWGCGKRRCSR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 22 NR2F1 Reverse Complement Reverse Complement Backward 1 14 3.05897 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: ------AKGYYCAAAGRTCA MSGKKRCGCWDCABTGBBCD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 34 HNF4A Original Motif Reverse Complement Backward 1 13 3.53748 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: -------TGMYCTTTGBCCK DGVBCABTGDWGCGKRRCSR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 46 Motif name: RORA_1 Consensus sequence (original motif): AWVDAGGTCA Consensus sequence (reverse complement motif): TGACCTDVWT ************************************************************************ Best Matches for Motif ID 46 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 29 ESR1 Reverse Complement Reverse Complement Backward 2 10 0.0417851 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV ---------TGACCTDVWT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 17 RXRAVDR Original Motif Original Motif Forward 6 10 0.05325 Consensus sequence (original motif): GGGTCAWBGRGTTCA Consensus sequence (reverse complement motif): TGAACKCBWTGACCC Alignment: GGGTCAWBGRGTTCA -----AWVDAGGTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 43 NR1H2RXRA Original Motif Original Motif Forward 6 10 0.05425 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC -----AWVDAGGTCA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 47 RXRRAR_DR5 Reverse Complement Reverse Complement Forward 1 10 0.0600761 Consensus sequence (original motif): RGKTCABVVRGAGGTCA Consensus sequence (reverse complement motif): TGACCTCKVVBTGAYCK Alignment: TGACCTCKVVBTGAYCK TGACCTDVWT------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 22 NR2F1 Reverse Complement Original Motif Forward 5 10 0.0654808 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: TGAMCTTTGMMCYT ----TGACCTDVWT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 PPARGRXRA Original Motif Original Motif Backward 1 10 0.06668 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA -----AWVDAGGTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 REST Original Motif Original Motif Forward 7 10 0.0755608 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC ------AWVDAGGTCA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 34 HNF4A Original Motif Original Motif Forward 4 10 0.0803396 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: RGGBCAAAGKYCA ---AWVDAGGTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 24 Ar Original Motif Reverse Complement Forward 13 10 0.0814167 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: VRVDGGHACAVDDKGTHCTDWH ------------AWVDAGGTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 RREB1 Reverse Complement Original Motif Forward 4 10 0.0901591 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: CCCCMAAMCAMCCMCMMMCV ---TGACCTDVWT------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 47 Motif name: RXRRAR_DR5 Consensus sequence (original motif): RGKTCABVVRGAGGTCA Consensus sequence (reverse complement motif): TGACCTCKVVBTGAYCK ************************************************************************ Best Matches for Motif ID 47 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 29 ESR1 Original Motif Reverse Complement Backward 1 17 0.0554256 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV ---RGKTCABVVRGAGGTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 30 ESR2 Reverse Complement Original Motif Forward 2 17 0.0590677 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: VHRGGTCABDBTGMCCTB -TGACCTCKVVBTGAYCK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 45 Pax5 Reverse Complement Reverse Complement Backward 1 17 0.0594693 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: MSGKKRCGCWDCABTGBBCD ---TGACCTCKVVBTGAYCK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 24 Ar Reverse Complement Original Motif Backward 2 17 0.0751876 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: HWDAGHACRHHVTGTHCCHVMV ----TGACCTCKVVBTGAYCK- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 PPARGRXRA Original Motif Original Motif Backward 1 15 1.0449 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: --BTRGGDCARAGGKCA RGKTCABVVRGAGGTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 17 RXRAVDR Original Motif Original Motif Forward 1 15 1.05297 Consensus sequence (original motif): GGGTCAWBGRGTTCA Consensus sequence (reverse complement motif): TGAACKCBWTGACCC Alignment: GGGTCAWBGRGTTCA-- RGKTCABVVRGAGGTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 22 NR2F1 Reverse Complement Original Motif Backward 1 14 1.56607 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: ---TGAMCTTTGMMCYT TGACCTCKVVBTGAYCK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 21 PLAG1 Original Motif Original Motif Forward 1 14 1.57917 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: GGGGCCCAAGGGGG--- RGKTCABVVRGAGGTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 34 HNF4A Reverse Complement Reverse Complement Forward 1 13 2.0437 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: TGMYCTTTGBCCK---- TGACCTCKVVBTGAYCK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 RREB1 Reverse Complement Original Motif Backward 8 13 2.06494 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: ----CCCCMAAMCAMCCMCMMMCV TGACCTCKVVBTGAYCK------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 48 Motif name: Tcfcp2l1 Consensus sequence (original motif): CCAGYYHVADCCRG Consensus sequence (reverse complement motif): CKGGDTBDMMCTGG ************************************************************************ Best Matches for Motif ID 48 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 24 Ar Original Motif Original Motif Backward 3 14 0.0679942 Consensus sequence (original motif): HWDAGHACRHHVTGTHCCHVMV Consensus sequence (reverse complement motif): VRVDGGHACAVDDKGTHCTDWH Alignment: HWDAGHACRHHVTGTHCCHVMV ------CCAGYYHVADCCRG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 29 ESR1 Original Motif Reverse Complement Forward 4 14 0.0713928 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV ---CCAGYYHVADCCRG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 12 Zfx Original Motif Original Motif Backward 1 14 0.0714852 Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: BBVGCCBVGGCCTV CCAGYYHVADCCRG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 18 RREB1 Reverse Complement Reverse Complement Backward 2 14 0.0777364 Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: BGRRRGRGGRTGRTTYGGGG -----CKGGDTBDMMCTGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 21 PLAG1 Reverse Complement Original Motif Forward 1 14 0.0817193 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: GGGGCCCAAGGGGG CKGGDTBDMMCTGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 30 ESR2 Reverse Complement Original Motif Backward 1 14 0.0828703 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: VHRGGTCABDBTGMCCTB ----CKGGDTBDMMCTGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 20 PPARGRXRA Reverse Complement Reverse Complement Backward 1 14 0.0829929 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: TGRCCTKTGHCCKAB -CKGGDTBDMMCTGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 45 Pax5 Reverse Complement Original Motif Forward 8 13 0.575635 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD Alignment: DGVBCABTGDWGCGKRRCSR- -------CKGGDTBDMMCTGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 47 RXRRAR_DR5 Reverse Complement Original Motif Forward 5 13 0.578477 Consensus sequence (original motif): RGKTCABVVRGAGGTCA Consensus sequence (reverse complement motif): TGACCTCKVVBTGAYCK Alignment: RGKTCABVVRGAGGTCA- ----CKGGDTBDMMCTGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 19 REST Reverse Complement Original Motif Backward 10 12 1.07716 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: --TTCAGCACCATGGACAGCKCC CKGGDTBDMMCTGG--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Results created by MOTIFSIM on 09-23-2015 12:30:58 Runtime: 62.6699 seconds. MOTIFSIM is written by Ngoc Tam L. Tran