**************************************************************************************************************************************************************************************************** MOTIFSIM - Motif Similarity Detection Tool Version 2.0 **************************************************************************************************************************************************************************************************** INPUT **************************************************************************************************************************************************************************************************** Input Parameters Number of files: 5 Number of top significant motifs: 10 Number of best matches: 10 Similarity cutoff: >= 0.75 Output file type: All Output file format: All Input files and motif counts File name Count of motifs Dataset # MEME_DM05.txt 46 1 MEME-CHIP_DM05.txt 4 2 PScanChIP_DM05.txt 16 3 RSAT_peak-motifs_DM05.txt 17 4 W-ChIPMotifs_DM05.txt 11 5 **************************************************************************************************************************************************************************************************** RESULTS **************************************************************************************************************************************************************************************************** ****************************************************************** Top 10 Significant Motifs - Global Matching (Highest to Lowest) ****************************************************************** Dataset #: 5 Motif ID: 84 Motif name: TFW3 Consensus sequence (original motif): GCACTG Consensus sequence (reverse complement motif): CAGTGC *************************************************************** Best Matches for Top Significant Motif ID 84 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 TgTGgTGTCACAGTGCTCC Reverse Complement Original Motif Backward 11 6 0 Consensus sequence (original motif): TGTGGTGTCACAGTGCTCC Consensus sequence (reverse complement motif): GGAGCACTGTGACACCACA Alignment: TGTGGTGTCACAGTGCTCC ---CAGTGC---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Reverse Complement Original Motif Forward 7 6 0.000794289 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: CACTGTGRTRTCACAGTGSWSCACT ------CAGTGC------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Reverse Complement Reverse Complement Backward 5 6 0.00482436 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: CCACTGTGVTGTCACAGTGCTCCA --------------CAGTGC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 76 CAcCACAGTGGAGCAct Reverse Complement Original Motif Forward 7 6 0.0201914 Consensus sequence (original motif): CAHCACAGTGGAGCACT Consensus sequence (reverse complement motif): AGTGCTCCACTGTGDTG Alignment: CAHCACAGTGGAGCACT ------CAGTGC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 70 CagTGCTCCACTGTGgT Reverse Complement Reverse Complement Forward 5 6 0.0205497 Consensus sequence (original motif): CAGTGCTCCACTGTGBT Consensus sequence (reverse complement motif): ABCACAGTGGAGCACTG Alignment: ABCACAGTGGAGCACTG ----CAGTGC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 AgTGCTCCACTGTGgTGTCACAgT Original Motif Original Motif Backward 13 6 0.0290883 Consensus sequence (original motif): AGTGCTCCACTGTGGTGTCACAGT Consensus sequence (reverse complement motif): ACTGTGACACCACAGTGGAGCACT Alignment: AGTGCTCCACTGTGGTGTCACAGT ------GCACTG------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Reverse Complement Original Motif Backward 15 6 0.039883 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC -CAGTGC-------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 65 Tcfcp2l1 Reverse Complement Original Motif Forward 8 6 0.0447224 Consensus sequence (original motif): CCAGYYHVADCCRG Consensus sequence (reverse complement motif): CKGGDTBDMMCTGG Alignment: CCAGYYHVADCCRG -------CAGTGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 5 Motif 5 Reverse Complement Original Motif Forward 9 6 0.0459818 Consensus sequence (original motif): CWGAGCCAYCTYTC Consensus sequence (reverse complement motif): GAKAGKTGGCTCWG Alignment: CWGAGCCAYCTYTC --------CAGTGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 75 wwCCAmAGTCmt Original Motif Reverse Complement Forward 6 6 0.0587933 Consensus sequence (original motif): DDCCAMAGTCHB Consensus sequence (reverse complement motif): VDGACTRTGGDD Alignment: VDGACTRTGGDD -----GCACTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 85 Motif name: TFW1 Consensus sequence (original motif): TTGCGCAA Consensus sequence (reverse complement motif): TTGCGCAA *************************************************************** Best Matches for Top Significant Motif ID 85 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 21 Motif 21 Original Motif Reverse Complement Backward 1 8 0.0195312 Consensus sequence (original motif): CTGCTTTCCMAA Consensus sequence (reverse complement motif): TTYGGAAAGCAG Alignment: TTYGGAAAGCAG ----TTGCGCAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 52 NR2F1 Reverse Complement Reverse Complement Forward 1 8 0.0276442 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: AKGYYCAAAGRTCA TTGCGCAA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 64 PPARGRXRA Reverse Complement Original Motif Forward 7 8 0.0277567 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA ------TTGCGCAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 28 Motif 28 Original Motif Reverse Complement Backward 2 8 0.0328125 Consensus sequence (original motif): ATTTAGTAAA Consensus sequence (reverse complement motif): TTTACTAAAT Alignment: TTTACTAAAT -TTGCGCAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 76 CAcCACAGTGGAGCAct Reverse Complement Original Motif Forward 2 8 0.0336914 Consensus sequence (original motif): CAHCACAGTGGAGCACT Consensus sequence (reverse complement motif): AGTGCTCCACTGTGDTG Alignment: CAHCACAGTGGAGCACT -TTGCGCAA-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Original Motif Original Motif Backward 17 8 0.0338471 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: TGGAGCACTGTGACAVCACAGTGG TTGCGCAA---------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 AgTGCTCCACTGTGgTGTCACAgT Reverse Complement Original Motif Backward 2 8 0.034375 Consensus sequence (original motif): AGTGCTCCACTGTGGTGTCACAGT Consensus sequence (reverse complement motif): ACTGTGACACCACAGTGGAGCACT Alignment: AGTGCTCCACTGTGGTGTCACAGT ---------------TTGCGCAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 70 CagTGCTCCACTGTGgT Reverse Complement Original Motif Backward 3 8 0.0354167 Consensus sequence (original motif): CAGTGCTCCACTGTGBT Consensus sequence (reverse complement motif): ABCACAGTGGAGCACTG Alignment: CAGTGCTCCACTGTGBT -------TTGCGCAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Original Motif Backward 3 8 0.0407242 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: CACTGTGRTRTCACAGTGSWSCACT ---------------TTGCGCAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 16 Motif 16 Original Motif Reverse Complement Forward 3 8 0.0421875 Consensus sequence (original motif): TCTKTGTCAAWA Consensus sequence (reverse complement motif): TWTTGACAYAGA Alignment: TWTTGACAYAGA --TTGCGCAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 55 Motif name: ZEB1 Consensus sequence (original motif): CACCTD Consensus sequence (reverse complement motif): HAGGTG *************************************************************** Best Matches for Top Significant Motif ID 55 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 47 Motif 47 Original Motif Original Motif Forward 4 6 0 Consensus sequence (original motif): YGCCACCTDSTGGY Consensus sequence (reverse complement motif): KCCASDAGGTGGCK Alignment: YGCCACCTDSTGGY ---CACCTD----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 5 Motif 5 Original Motif Original Motif Forward 7 6 0.00902841 Consensus sequence (original motif): CWGAGCCAYCTYTC Consensus sequence (reverse complement motif): GAKAGKTGGCTCWG Alignment: CWGAGCCAYCTYTC ------CACCTD-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 46 Motif 46 Original Motif Reverse Complement Backward 8 6 0.0285279 Consensus sequence (original motif): ATAGGTTTAGYATA Consensus sequence (reverse complement motif): TATKCTAAACCTAT Alignment: TATKCTAAACCTAT -CACCTD------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 20 Motif 20 Original Motif Original Motif Forward 3 6 0.0346255 Consensus sequence (original motif): TCCTCCTGGAA Consensus sequence (reverse complement motif): TTCCAGGAGGA Alignment: TCCTCCTGGAA --CACCTD--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 12 Motif 12 Original Motif Original Motif Forward 5 6 0.0376742 Consensus sequence (original motif): ACAACACATTT Consensus sequence (reverse complement motif): AAATGTGTTGT Alignment: ACAACACATTT ----CACCTD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 34 Motif 34 Reverse Complement Original Motif Backward 2 6 0.0397068 Consensus sequence (original motif): AAAGATGA Consensus sequence (reverse complement motif): TCATCTTT Alignment: AAAGATGA -HAGGTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 22 Motif 22 Reverse Complement Original Motif Backward 4 6 0.0397068 Consensus sequence (original motif): TTTATGGTGAGCAT Consensus sequence (reverse complement motif): ATGCTCACCATAAA Alignment: TTTATGGTGAGCAT -----HAGGTG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 17 Motif 17 Reverse Complement Reverse Complement Backward 6 6 0.0458043 Consensus sequence (original motif): CTTCTGACCTC Consensus sequence (reverse complement motif): GAGGTCAGAAG Alignment: GAGGTCAGAAG HAGGTG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 92 TFM11 Original Motif Original Motif Backward 7 6 0.0461561 Consensus sequence (original motif): CAMACACACACAYDCACACA Consensus sequence (reverse complement motif): TGTGTGDKTGTGTGTGTRTG Alignment: CAMACACACACAYDCACACA --------CACCTD------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 89 TFM1 Original Motif Original Motif Backward 7 6 0.0467843 Consensus sequence (original motif): CACACACACACWCACACA Consensus sequence (reverse complement motif): TGTGTGWGTGTGTGTGTG Alignment: CACACACACACWCACACA ------CACCTD------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 3 Motif name: Motif 3 Consensus sequence (original motif): HCAGRRVACASAG Consensus sequence (reverse complement motif): CTSTGTBKMCTGH *************************************************************** Best Matches for Top Significant Motif ID 3 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 93 TFM12 Original Motif Original Motif Forward 7 13 0.00926418 Consensus sequence (original motif): RAGKGMAGVRRGSRCASAGV Consensus sequence (reverse complement motif): VCTSTGKSCMKBCTRCYCTK Alignment: RAGKGMAGVRRGSRCASAGV ------HCAGRRVACASAG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Original Motif Original Motif Forward 4 13 0.0328703 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY ---HCAGRRVACASAG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Reverse Complement Backward 3 13 0.0400966 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: AGTGSWSCACTGTGAMAMCACAGTG ----------HCAGRRVACASAG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 90 TFM2 Original Motif Reverse Complement Forward 3 13 0.0435274 Consensus sequence (original motif): CHHCHBTCCTSCYTCTGC Consensus sequence (reverse complement motif): GCAGAKGSAGGABDGHDG Alignment: GCAGAKGSAGGABDGHDG --HCAGRRVACASAG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 66 CTCF Original Motif Original Motif Forward 7 13 0.0448341 Consensus sequence (original motif): YDRCCASYAGRKGGCRSYV Consensus sequence (reverse complement motif): BMSMGCCYMCTKSTGGMHM Alignment: YDRCCASYAGRKGGCRSYV ------HCAGRRVACASAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Reverse Complement Reverse Complement Forward 4 13 0.045698 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: CCACTGTGVTGTCACAGTGCTCCA ---CTSTGTBKMCTGH-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 64 PPARGRXRA Original Motif Original Motif Forward 1 13 0.0457253 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA HCAGRRVACASAG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 65 Tcfcp2l1 Reverse Complement Reverse Complement Forward 1 13 0.0477557 Consensus sequence (original motif): CCAGYYHVADCCRG Consensus sequence (reverse complement motif): CKGGDTBDMMCTGG Alignment: CKGGDTBDMMCTGG CTSTGTBKMCTGH- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 94 TFM13 Original Motif Reverse Complement Backward 4 13 0.0478998 Consensus sequence (original motif): TTTTTTTKTTKTTTAATTHW Consensus sequence (reverse complement motif): WHAATTAAARAARAAAAAAA Alignment: WHAATTAAARAARAAAAAAA ----HCAGRRVACASAG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 88 TFF11 Original Motif Reverse Complement Backward 1 13 0.048132 Consensus sequence (original motif): CTGCTGBDBBDGBD Consensus sequence (reverse complement motif): HVCDBBDBCAGCAG Alignment: HVCDBBDBCAGCAG -HCAGRRVACASAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 48 Motif name: Motif 48 Consensus sequence (original motif): GCARRGGSAGS Consensus sequence (reverse complement motif): SCTSCCKMTGC *************************************************************** Best Matches for Top Significant Motif ID 48 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 1 Motif 1 Reverse Complement Original Motif Backward 1 11 0 Consensus sequence (original motif): CYTSCCTCTGC Consensus sequence (reverse complement motif): GCAGAGGSAKG Alignment: CYTSCCTCTGC SCTSCCKMTGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 90 TFM2 Original Motif Reverse Complement Forward 1 11 0.000952693 Consensus sequence (original motif): CHHCHBTCCTSCYTCTGC Consensus sequence (reverse complement motif): GCAGAKGSAGGABDGHDG Alignment: GCAGAKGSAGGABDGHDG GCARRGGSAGS------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 66 CTCF Original Motif Original Motif Backward 3 11 0.033658 Consensus sequence (original motif): YDRCCASYAGRKGGCRSYV Consensus sequence (reverse complement motif): BMSMGCCYMCTKSTGGMHM Alignment: YDRCCASYAGRKGGCRSYV ------GCARRGGSAGS-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 88 TFF11 Reverse Complement Original Motif Forward 3 11 0.0410341 Consensus sequence (original motif): CTGCTGBDBBDGBD Consensus sequence (reverse complement motif): HVCDBBDBCAGCAG Alignment: CTGCTGBDBBDGBD --SCTSCCKMTGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 93 TFM12 Original Motif Original Motif Backward 6 11 0.0422459 Consensus sequence (original motif): RAGKGMAGVRRGSRCASAGV Consensus sequence (reverse complement motif): VCTSTGKSCMKBCTRCYCTK Alignment: RAGKGMAGVRRGSRCASAGV ----GCARRGGSAGS----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 65 Tcfcp2l1 Reverse Complement Original Motif Forward 1 11 0.0533531 Consensus sequence (original motif): CCAGYYHVADCCRG Consensus sequence (reverse complement motif): CKGGDTBDMMCTGG Alignment: CCAGYYHVADCCRG SCTSCCKMTGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Reverse Complement Reverse Complement Forward 4 11 0.0578944 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA ---SCTSCCKMTGC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Original Motif Original Motif Forward 3 11 0.0620615 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY --GCARRGGSAGS------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 3 Motif 3 Original Motif Original Motif Forward 1 11 0.0627554 Consensus sequence (original motif): HCAGRRVACASAG Consensus sequence (reverse complement motif): CTSTGTBKMCTGH Alignment: HCAGRRVACASAG GCARRGGSAGS-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 ESR2 Reverse Complement Original Motif Backward 5 11 0.0646979 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: VHRGGTCABDBTGMCCTB ---SCTSCCKMTGC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 87 Motif name: TFF1 Consensus sequence (original motif): AGGACAAAGAVV Consensus sequence (reverse complement motif): VVTCTTTGTCCT *************************************************************** Best Matches for Top Significant Motif ID 87 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 51 HNF4A Reverse Complement Reverse Complement Forward 2 12 0.0111472 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: TGMYCTTTGBCCK -VVTCTTTGTCCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 64 PPARGRXRA Original Motif Original Motif Forward 3 12 0.0210867 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA --AGGACAAAGAVV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 ESR2 Reverse Complement Reverse Complement Forward 5 12 0.0351633 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: BAGGYCABHBTGACCKHV ----VVTCTTTGTCCT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Reverse Complement Original Motif Backward 9 12 0.039773 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY VVTCTTTGTCCT-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 52 NR2F1 Original Motif Reverse Complement Backward 2 12 0.0472374 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: AKGYYCAAAGRTCA -AGGACAAAGAVV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 60 NR1H2RXRA Reverse Complement Reverse Complement Backward 3 12 0.0472884 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: GTTGACCTTTGACCTTT ---VVTCTTTGTCCT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Original Motif Backward 7 12 0.0530556 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: CACTGTGRTRTCACAGTGSWSCACT -------AGGACAAAGAVV------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Original Motif Original Motif Forward 13 12 0.0539204 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: TGGAGCACTGTGACAVCACAGTGG ------------AGGACAAAGAVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Original Motif Original Motif Forward 4 12 0.0558379 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC ---AGGACAAAGAVV------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 AgTGCTCCACTGTGgTGTCACAgT Reverse Complement Original Motif Backward 7 12 0.0609269 Consensus sequence (original motif): AGTGCTCCACTGTGGTGTCACAGT Consensus sequence (reverse complement motif): ACTGTGACACCACAGTGGAGCACT Alignment: AGTGCTCCACTGTGGTGTCACAGT ------VVTCTTTGTCCT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 37 Motif name: Motif 37 Consensus sequence (original motif): ACTTTGG Consensus sequence (reverse complement motif): CCAAAGT *************************************************************** Best Matches for Top Significant Motif ID 37 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 69 atactttggc Reverse Complement Reverse Complement Forward 2 7 0 Consensus sequence (original motif): ATACTTTGGC Consensus sequence (reverse complement motif): GCCAAAGTAT Alignment: GCCAAAGTAT -CCAAAGT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 75 wwCCAmAGTCmt Reverse Complement Original Motif Backward 4 7 0.0275974 Consensus sequence (original motif): DDCCAMAGTCHB Consensus sequence (reverse complement motif): VDGACTRTGGDD Alignment: DDCCAMAGTCHB --CCAAAGT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 AgTGCTCCACTGTGgTGTCACAgT Reverse Complement Reverse Complement Forward 10 7 0.056841 Consensus sequence (original motif): AGTGCTCCACTGTGGTGTCACAGT Consensus sequence (reverse complement motif): ACTGTGACACCACAGTGGAGCACT Alignment: ACTGTGACACCACAGTGGAGCACT ---------CCAAAGT-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 71 AmTGTGACACCACAGT Original Motif Reverse Complement Backward 10 7 0.0597098 Consensus sequence (original motif): AMTGTGACACCACAGT Consensus sequence (reverse complement motif): ACTGTGGTGTCACART Alignment: ACTGTGGTGTCACART ACTTTGG--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 76 CAcCACAGTGGAGCAct Original Motif Reverse Complement Forward 9 7 0.061942 Consensus sequence (original motif): CAHCACAGTGGAGCACT Consensus sequence (reverse complement motif): AGTGCTCCACTGTGDTG Alignment: AGTGCTCCACTGTGDTG --------ACTTTGG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 70 CagTGCTCCACTGTGgT Reverse Complement Reverse Complement Forward 2 7 0.0625 Consensus sequence (original motif): CAGTGCTCCACTGTGBT Consensus sequence (reverse complement motif): ABCACAGTGGAGCACTG Alignment: ABCACAGTGGAGCACTG -CCAAAGT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 52 NR2F1 Original Motif Original Motif Forward 4 7 0.0686813 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: TGAMCTTTGMMCYT ---ACTTTGG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Original Motif Forward 2 7 0.0714286 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: CACTGTGRTRTCACAGTGSWSCACT -ACTTTGG----------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Reverse Complement Original Motif Backward 3 7 0.0714286 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: TGGAGCACTGTGACAVCACAGTGG ---------------CCAAAGT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 60 NR1H2RXRA Original Motif Reverse Complement Forward 5 7 0.0728571 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: GTTGACCTTTGACCTTT ----ACTTTGG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 50 Motif name: Motif 50 Consensus sequence (original motif): GGAAM Consensus sequence (reverse complement motif): YTTCC *************************************************************** Best Matches for Top Significant Motif ID 50 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 21 Motif 21 Reverse Complement Original Motif Forward 4 5 0.01875 Consensus sequence (original motif): CTGCTTTCCMAA Consensus sequence (reverse complement motif): TTYGGAAAGCAG Alignment: CTGCTTTCCMAA ---YTTCC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 41 Motif 41 Reverse Complement Reverse Complement Backward 5 5 0.01875 Consensus sequence (original motif): TGGAGGAAA Consensus sequence (reverse complement motif): TTTCCTCCA Alignment: TTTCCTCCA YTTCC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 43 Motif 43 Reverse Complement Reverse Complement Forward 5 5 0.04375 Consensus sequence (original motif): AAKGAAAGGCA Consensus sequence (reverse complement motif): TGCCTTTCYTT Alignment: TGCCTTTCYTT ----YTTCC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 44 Motif 44 Reverse Complement Reverse Complement Forward 3 5 0.05625 Consensus sequence (original motif): AATGKAAGAA Consensus sequence (reverse complement motif): TTCTTYCATT Alignment: TTCTTYCATT --YTTCC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 9 Motif 9 Original Motif Reverse Complement Forward 8 5 0.06875 Consensus sequence (original motif): AACATATTTTCA Consensus sequence (reverse complement motif): TGAAAATATGTT Alignment: TGAAAATATGTT -------GGAAM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 19 Motif 19 Reverse Complement Reverse Complement Backward 3 5 0.06875 Consensus sequence (original motif): AGAGAAAG Consensus sequence (reverse complement motif): CTTTCTCT Alignment: CTTTCTCT -YTTCC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 28 Motif 28 Original Motif Original Motif Forward 6 5 0.06875 Consensus sequence (original motif): ATTTAGTAAA Consensus sequence (reverse complement motif): TTTACTAAAT Alignment: ATTTAGTAAA -----GGAAM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 8 Motif 8 Reverse Complement Reverse Complement Forward 7 5 0.06875 Consensus sequence (original motif): TGAAAATSCTT Consensus sequence (reverse complement motif): AAGSATTTTCA Alignment: AAGSATTTTCA ------YTTCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Reverse Complement Reverse Complement Forward 6 5 0.0747947 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA -----YTTCC----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 23 Motif 23 Reverse Complement Original Motif Backward 5 5 0.075 Consensus sequence (original motif): ATGTWTTCATTMAT Consensus sequence (reverse complement motif): ATYAATGAAWACAT Alignment: ATGTWTTCATTMAT -----YTTCC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 61 Motif name: NR4A2 Consensus sequence (original motif): AAGGTCAC Consensus sequence (reverse complement motif): GTGACCTT *************************************************************** Best Matches for Top Significant Motif ID 61 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 17 Motif 17 Reverse Complement Original Motif Forward 1 8 0.0393171 Consensus sequence (original motif): CTTCTGACCTC Consensus sequence (reverse complement motif): GAGGTCAGAAG Alignment: CTTCTGACCTC GTGACCTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 15 Motif 15 Original Motif Original Motif Forward 2 8 0.040519 Consensus sequence (original motif): AAAGRTMAAACTA Consensus sequence (reverse complement motif): TAGTTTYAKCTTT Alignment: AAAGRTMAAACTA -AAGGTCAC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 24 Motif 24 Reverse Complement Reverse Complement Forward 4 8 0.0539119 Consensus sequence (original motif): AAAGWCATWAA Consensus sequence (reverse complement motif): TTWATGWCTTT Alignment: TTWATGWCTTT ---GTGACCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Original Motif Forward 7 8 0.0557243 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: CACTGTGRTRTCACAGTGSWSCACT ------AAGGTCAC----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 35 Motif 35 Reverse Complement Original Motif Forward 2 8 0.0566591 Consensus sequence (original motif): AGATGYTCTTG Consensus sequence (reverse complement motif): CAAGAKCATCT Alignment: AGATGYTCTTG -GTGACCTT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 93 TFM12 Original Motif Original Motif Forward 10 8 0.0584971 Consensus sequence (original motif): RAGKGMAGVRRGSRCASAGV Consensus sequence (reverse complement motif): VCTSTGKSCMKBCTRCYCTK Alignment: RAGKGMAGVRRGSRCASAGV ---------AAGGTCAC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Original Motif Reverse Complement Forward 8 8 0.060729 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: CCACTGTGVTGTCACAGTGCTCCA -------AAGGTCAC--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 71 AmTGTGACACCACAGT Original Motif Reverse Complement Forward 6 8 0.0645146 Consensus sequence (original motif): AMTGTGACACCACAGT Consensus sequence (reverse complement motif): ACTGTGGTGTCACART Alignment: ACTGTGGTGTCACART -----AAGGTCAC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 22 Motif 22 Reverse Complement Original Motif Backward 7 8 0.0664462 Consensus sequence (original motif): TTTATGGTGAGCAT Consensus sequence (reverse complement motif): ATGCTCACCATAAA Alignment: TTTATGGTGAGCAT GTGACCTT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 18 Motif 18 Reverse Complement Reverse Complement Forward 2 8 0.0674765 Consensus sequence (original motif): CAAAGTCCAGC Consensus sequence (reverse complement motif): GCTGGACTTTG Alignment: GCTGGACTTTG -GTGACCTT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 79 Motif name: cCGCGGrCACG Consensus sequence (original motif): CCGCGGRCACG Consensus sequence (reverse complement motif): CGTGKCCGCGG *************************************************************** Best Matches for Top Significant Motif ID 79 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 88 TFF11 Reverse Complement Reverse Complement Forward 4 11 0.0478408 Consensus sequence (original motif): CTGCTGBDBBDGBD Consensus sequence (reverse complement motif): HVCDBBDBCAGCAG Alignment: HVCDBBDBCAGCAG ---CGTGKCCGCGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Original Motif Original Motif Backward 4 11 0.0484441 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC -------CCGCGGRCACG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Reverse Complement Reverse Complement Backward 3 11 0.0486581 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV -------CGTGKCCGCGG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 66 CTCF Original Motif Original Motif Backward 2 11 0.0588663 Consensus sequence (original motif): YDRCCASYAGRKGGCRSYV Consensus sequence (reverse complement motif): BMSMGCCYMCTKSTGGMHM Alignment: YDRCCASYAGRKGGCRSYV -------CCGCGGRCACG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 3 Motif 3 Original Motif Original Motif Forward 2 11 0.0597806 Consensus sequence (original motif): HCAGRRVACASAG Consensus sequence (reverse complement motif): CTSTGTBKMCTGH Alignment: HCAGRRVACASAG -CCGCGGRCACG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 2 Motif 2 Reverse Complement Reverse Complement Backward 3 11 0.0624268 Consensus sequence (original motif): ACACACACACACAC Consensus sequence (reverse complement motif): GTGTGTGTGTGTGT Alignment: GTGTGTGTGTGTGT -CGTGKCCGCGG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 93 TFM12 Original Motif Original Motif Backward 5 11 0.0625015 Consensus sequence (original motif): RAGKGMAGVRRGSRCASAGV Consensus sequence (reverse complement motif): VCTSTGKSCMKBCTRCYCTK Alignment: RAGKGMAGVRRGSRCASAGV -----CCGCGGRCACG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 89 TFM1 Original Motif Original Motif Backward 3 11 0.0628056 Consensus sequence (original motif): CACACACACACWCACACA Consensus sequence (reverse complement motif): TGTGTGWGTGTGTGTGTG Alignment: CACACACACACWCACACA -----CCGCGGRCACG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 64 PPARGRXRA Reverse Complement Reverse Complement Forward 4 11 0.0629476 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: TGRCCTKTGHCCKAB ---CGTGKCCGCGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 92 TFM11 Original Motif Original Motif Forward 8 11 0.0634175 Consensus sequence (original motif): CAMACACACACAYDCACACA Consensus sequence (reverse complement motif): TGTGTGDKTGTGTGTGTRTG Alignment: CAMACACACACAYDCACACA -------CCGCGGRCACG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- **************************************************************************************************************************************************************************************************** **************************************************************** Significant Motifs - Global and Local Matching (Highest to Lowest) **************************************************************** Dataset #: 3 Motif ID: 55 Motif name: ZEB1 Consensus sequence (original motif): CACCTD Consensus sequence (reverse complement motif): HAGGTG ************************************************************** Best Matches for Significant Motif ID 55 (Highest to Lowest) ************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 47 Motif 47 Original Motif Original Motif Backward 6 6 0 Consensus sequence (original motif): YGCCACCTDSTGGY Consensus sequence (reverse complement motif): KCCASDAGGTGGCK Alignment: YGCCACCTDSTGGY ---CACCTD----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 5 Motif 5 Original Motif Original Motif Backward 3 6 0.00902841 Consensus sequence (original motif): CWGAGCCAYCTYTC Consensus sequence (reverse complement motif): GAKAGKTGGCTCWG Alignment: CWGAGCCAYCTYTC ------CACCTD-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 66 CTCF Reverse Complement Original Motif Forward 8 6 0.0118423 Consensus sequence (original motif): YDRCCASYAGRKGGCRSYV Consensus sequence (reverse complement motif): BMSMGCCYMCTKSTGGMHM Alignment: YDRCCASYAGRKGGCRSYV -------HAGGTG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 62 RORA_1 Original Motif Reverse Complement Backward 4 6 0.0187312 Consensus sequence (original motif): AWVDAGGTCA Consensus sequence (reverse complement motif): TGACCTDVWT Alignment: TGACCTDVWT -CACCTD--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Reverse Complement Reverse Complement Backward 6 6 0.0189156 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA ----------HAGGTG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 54 Esrrb Reverse Complement Original Motif Forward 2 6 0.0248883 Consensus sequence (original motif): VBBYCAAGGTCA Consensus sequence (reverse complement motif): TGACCTTGMBBB Alignment: VBBYCAAGGTCA -HAGGTG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 60 NR1H2RXRA Original Motif Reverse Complement Backward 2 6 0.0278775 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: GTTGACCTTTGACCTTT ----------CACCTD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 46 Motif 46 Original Motif Reverse Complement Backward 8 6 0.0285279 Consensus sequence (original motif): ATAGGTTTAGYATA Consensus sequence (reverse complement motif): TATKCTAAACCTAT Alignment: TATKCTAAACCTAT -CACCTD------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 64 PPARGRXRA Original Motif Reverse Complement Backward 9 6 0.0310859 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: TGRCCTKTGHCCKAB -CACCTD-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 61 NR4A2 Original Motif Reverse Complement Backward 1 6 0.0334919 Consensus sequence (original motif): AAGGTCAC Consensus sequence (reverse complement motif): GTGACCTT Alignment: GTGACCTT --CACCTD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 84 Motif name: TFW3 Consensus sequence (original motif): GCACTG Consensus sequence (reverse complement motif): CAGTGC ************************************************************** Best Matches for Significant Motif ID 84 (Highest to Lowest) ************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 TgTGgTGTCACAGTGCTCC Original Motif Reverse Complement Forward 11 6 0 Consensus sequence (original motif): TGTGGTGTCACAGTGCTCC Consensus sequence (reverse complement motif): GGAGCACTGTGACACCACA Alignment: GGAGCACTGTGACACCACA ----------GCACTG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Reverse Complement Backward 7 6 0.000794289 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: AGTGSWSCACTGTGAMAMCACAGTG -------------GCACTG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Reverse Complement Reverse Complement Backward 5 6 0.00482436 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: CCACTGTGVTGTCACAGTGCTCCA --------------CAGTGC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 76 CAcCACAGTGGAGCAct Reverse Complement Original Motif Forward 7 6 0.0201914 Consensus sequence (original motif): CAHCACAGTGGAGCACT Consensus sequence (reverse complement motif): AGTGCTCCACTGTGDTG Alignment: CAHCACAGTGGAGCACT ------CAGTGC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 70 CagTGCTCCACTGTGgT Reverse Complement Reverse Complement Backward 8 6 0.0205497 Consensus sequence (original motif): CAGTGCTCCACTGTGBT Consensus sequence (reverse complement motif): ABCACAGTGGAGCACTG Alignment: ABCACAGTGGAGCACTG ----CAGTGC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 AgTGCTCCACTGTGgTGTCACAgT Original Motif Original Motif Backward 13 6 0.0290883 Consensus sequence (original motif): AGTGCTCCACTGTGGTGTCACAGT Consensus sequence (reverse complement motif): ACTGTGACACCACAGTGGAGCACT Alignment: AGTGCTCCACTGTGGTGTCACAGT ------GCACTG------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Reverse Complement Original Motif Backward 15 6 0.039883 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC -CAGTGC-------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 65 Tcfcp2l1 Reverse Complement Original Motif Forward 8 6 0.0447224 Consensus sequence (original motif): CCAGYYHVADCCRG Consensus sequence (reverse complement motif): CKGGDTBDMMCTGG Alignment: CCAGYYHVADCCRG -------CAGTGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 5 Motif 5 Original Motif Reverse Complement Backward 9 6 0.0459818 Consensus sequence (original motif): CWGAGCCAYCTYTC Consensus sequence (reverse complement motif): GAKAGKTGGCTCWG Alignment: GAKAGKTGGCTCWG GCACTG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 75 wwCCAmAGTCmt Original Motif Reverse Complement Forward 6 6 0.0587933 Consensus sequence (original motif): DDCCAMAGTCHB Consensus sequence (reverse complement motif): VDGACTRTGGDD Alignment: VDGACTRTGGDD -----GCACTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 85 Motif name: TFW1 Consensus sequence (original motif): TTGCGCAA Consensus sequence (reverse complement motif): TTGCGCAA ************************************************************** Best Matches for Significant Motif ID 85 (Highest to Lowest) ************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 21 Motif 21 Original Motif Reverse Complement Backward 1 8 0.0195312 Consensus sequence (original motif): CTGCTTTCCMAA Consensus sequence (reverse complement motif): TTYGGAAAGCAG Alignment: TTYGGAAAGCAG ----TTGCGCAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 52 NR2F1 Reverse Complement Reverse Complement Forward 1 8 0.0276442 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: AKGYYCAAAGRTCA TTGCGCAA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 64 PPARGRXRA Reverse Complement Original Motif Forward 7 8 0.0277567 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA ------TTGCGCAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 28 Motif 28 Original Motif Reverse Complement Forward 2 8 0.0328125 Consensus sequence (original motif): ATTTAGTAAA Consensus sequence (reverse complement motif): TTTACTAAAT Alignment: TTTACTAAAT -TTGCGCAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 76 CAcCACAGTGGAGCAct Reverse Complement Original Motif Forward 2 8 0.0336914 Consensus sequence (original motif): CAHCACAGTGGAGCACT Consensus sequence (reverse complement motif): AGTGCTCCACTGTGDTG Alignment: CAHCACAGTGGAGCACT -TTGCGCAA-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Original Motif Original Motif Backward 17 8 0.0338471 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: TGGAGCACTGTGACAVCACAGTGG TTGCGCAA---------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 AgTGCTCCACTGTGgTGTCACAgT Reverse Complement Original Motif Forward 16 8 0.034375 Consensus sequence (original motif): AGTGCTCCACTGTGGTGTCACAGT Consensus sequence (reverse complement motif): ACTGTGACACCACAGTGGAGCACT Alignment: AGTGCTCCACTGTGGTGTCACAGT ---------------TTGCGCAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 70 CagTGCTCCACTGTGgT Reverse Complement Original Motif Backward 3 8 0.0354167 Consensus sequence (original motif): CAGTGCTCCACTGTGBT Consensus sequence (reverse complement motif): ABCACAGTGGAGCACTG Alignment: CAGTGCTCCACTGTGBT -------TTGCGCAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 91 TFM3 Reverse Complement Original Motif Backward 2 8 0.0359375 Consensus sequence (original motif): KTTTTTTKTTTTTTDAAB Consensus sequence (reverse complement motif): BTTHAAAAAAYAAAAAAR Alignment: KTTTTTTKTTTTTTDAAB ---------TTGCGCAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Original Motif Backward 3 8 0.0407242 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: CACTGTGRTRTCACAGTGSWSCACT ---------------TTGCGCAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 83 Motif name: srACyCCGAyr Consensus sequence (original motif): SRACYCCGAYR Consensus sequence (reverse complement motif): KKTCGGKGTKS ************************************************************** Best Matches for Significant Motif ID 83 (Highest to Lowest) ************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 92 TFM11 Reverse Complement Reverse Complement Backward 8 11 0.0337509 Consensus sequence (original motif): CAMACACACACAYDCACACA Consensus sequence (reverse complement motif): TGTGTGDKTGTGTGTGTRTG Alignment: TGTGTGDKTGTGTGTGTRTG --KKTCGGKGTKS------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Reverse Complement Reverse Complement Forward 2 11 0.0342809 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV -KKTCGGKGTKS-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 89 TFM1 Reverse Complement Reverse Complement Forward 7 11 0.0348124 Consensus sequence (original motif): CACACACACACWCACACA Consensus sequence (reverse complement motif): TGTGTGWGTGTGTGTGTG Alignment: TGTGTGWGTGTGTGTGTG ------KKTCGGKGTKS- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Reverse Complement Reverse Complement Backward 5 11 0.0372475 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: CCACTGTGVTGTCACAGTGCTCCA ---------KKTCGGKGTKS---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 ESR2 Original Motif Reverse Complement Forward 4 11 0.0379796 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: BAGGYCABHBTGACCKHV ---SRACYCCGAYR---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 TgTGgTGTCACAGTGCTCC Original Motif Reverse Complement Forward 6 11 0.0381944 Consensus sequence (original motif): TGTGGTGTCACAGTGCTCC Consensus sequence (reverse complement motif): GGAGCACTGTGACACCACA Alignment: GGAGCACTGTGACACCACA -----SRACYCCGAYR--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 6 Motif 6 Reverse Complement Reverse Complement Backward 2 11 0.039412 Consensus sequence (original motif): CASABACWSACACA Consensus sequence (reverse complement motif): TGTGTSWGTBTSTG Alignment: TGTGTSWGTBTSTG --KKTCGGKGTKS- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Reverse Complement Backward 7 11 0.0397727 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: AGTGSWSCACTGTGAMAMCACAGTG --------SRACYCCGAYR------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Reverse Complement Reverse Complement Backward 5 11 0.0402801 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA ------KKTCGGKGTKS---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 2 Motif 2 Reverse Complement Reverse Complement Forward 2 11 0.0438762 Consensus sequence (original motif): ACACACACACACAC Consensus sequence (reverse complement motif): GTGTGTGTGTGTGT Alignment: GTGTGTGTGTGTGT -KKTCGGKGTKS-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 87 Motif name: TFF1 Consensus sequence (original motif): AGGACAAAGAVV Consensus sequence (reverse complement motif): VVTCTTTGTCCT ************************************************************** Best Matches for Significant Motif ID 87 (Highest to Lowest) ************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 51 HNF4A Reverse Complement Reverse Complement Forward 2 12 0.0111472 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: TGMYCTTTGBCCK -VVTCTTTGTCCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 64 PPARGRXRA Original Motif Original Motif Forward 3 12 0.0210867 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA --AGGACAAAGAVV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 ESR2 Reverse Complement Reverse Complement Forward 5 12 0.0351633 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: BAGGYCABHBTGACCKHV ----VVTCTTTGTCCT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Reverse Complement Original Motif Backward 9 12 0.039773 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY VVTCTTTGTCCT-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 93 TFM12 Original Motif Original Motif Backward 8 12 0.0408272 Consensus sequence (original motif): RAGKGMAGVRRGSRCASAGV Consensus sequence (reverse complement motif): VCTSTGKSCMKBCTRCYCTK Alignment: RAGKGMAGVRRGSRCASAGV -AGGACAAAGAVV------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 52 NR2F1 Original Motif Reverse Complement Forward 2 12 0.0472374 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: AKGYYCAAAGRTCA -AGGACAAAGAVV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 60 NR1H2RXRA Reverse Complement Reverse Complement Forward 4 12 0.0472884 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: GTTGACCTTTGACCTTT ---VVTCTTTGTCCT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Original Motif Backward 7 12 0.0530556 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: CACTGTGRTRTCACAGTGSWSCACT -------AGGACAAAGAVV------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Original Motif Original Motif Forward 13 12 0.0539204 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: TGGAGCACTGTGACAVCACAGTGG ------------AGGACAAAGAVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Original Motif Original Motif Forward 4 12 0.0558379 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC ---AGGACAAAGAVV------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 3 Motif name: Motif 3 Consensus sequence (original motif): HCAGRRVACASAG Consensus sequence (reverse complement motif): CTSTGTBKMCTGH ************************************************************** Best Matches for Significant Motif ID 3 (Highest to Lowest) ************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 93 TFM12 Original Motif Original Motif Forward 7 13 0.00926418 Consensus sequence (original motif): RAGKGMAGVRRGSRCASAGV Consensus sequence (reverse complement motif): VCTSTGKSCMKBCTRCYCTK Alignment: RAGKGMAGVRRGSRCASAGV ------HCAGRRVACASAG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Original Motif Original Motif Forward 4 13 0.0328703 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY ---HCAGRRVACASAG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Reverse Complement Backward 3 13 0.0400966 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: AGTGSWSCACTGTGAMAMCACAGTG ----------HCAGRRVACASAG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 90 TFM2 Original Motif Reverse Complement Forward 3 13 0.0435274 Consensus sequence (original motif): CHHCHBTCCTSCYTCTGC Consensus sequence (reverse complement motif): GCAGAKGSAGGABDGHDG Alignment: GCAGAKGSAGGABDGHDG --HCAGRRVACASAG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 66 CTCF Original Motif Original Motif Forward 7 13 0.0448341 Consensus sequence (original motif): YDRCCASYAGRKGGCRSYV Consensus sequence (reverse complement motif): BMSMGCCYMCTKSTGGMHM Alignment: YDRCCASYAGRKGGCRSYV ------HCAGRRVACASAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Reverse Complement Reverse Complement Forward 4 13 0.045698 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: CCACTGTGVTGTCACAGTGCTCCA ---CTSTGTBKMCTGH-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 64 PPARGRXRA Original Motif Original Motif Forward 1 13 0.0457253 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA HCAGRRVACASAG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 65 Tcfcp2l1 Reverse Complement Reverse Complement Forward 1 13 0.0477557 Consensus sequence (original motif): CCAGYYHVADCCRG Consensus sequence (reverse complement motif): CKGGDTBDMMCTGG Alignment: CKGGDTBDMMCTGG CTSTGTBKMCTGH- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 94 TFM13 Original Motif Reverse Complement Backward 4 13 0.0478998 Consensus sequence (original motif): TTTTTTTKTTKTTTAATTHW Consensus sequence (reverse complement motif): WHAATTAAARAARAAAAAAA Alignment: WHAATTAAARAARAAAAAAA ----HCAGRRVACASAG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 88 TFF11 Original Motif Reverse Complement Forward 2 13 0.048132 Consensus sequence (original motif): CTGCTGBDBBDGBD Consensus sequence (reverse complement motif): HVCDBBDBCAGCAG Alignment: HVCDBBDBCAGCAG -HCAGRRVACASAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 61 Motif name: NR4A2 Consensus sequence (original motif): AAGGTCAC Consensus sequence (reverse complement motif): GTGACCTT ************************************************************** Best Matches for Significant Motif ID 61 (Highest to Lowest) ************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 60 NR1H2RXRA Original Motif Original Motif Backward 9 8 0.0167759 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC -AAGGTCAC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Original Motif Original Motif Forward 5 8 0.0195235 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY ----AAGGTCAC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 ESR2 Reverse Complement Reverse Complement Backward 2 8 0.0198372 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: BAGGYCABHBTGACCKHV ---------GTGACCTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 17 Motif 17 Reverse Complement Original Motif Forward 1 8 0.0393171 Consensus sequence (original motif): CTTCTGACCTC Consensus sequence (reverse complement motif): GAGGTCAGAAG Alignment: CTTCTGACCTC GTGACCTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 15 Motif 15 Original Motif Original Motif Forward 2 8 0.040519 Consensus sequence (original motif): AAAGRTMAAACTA Consensus sequence (reverse complement motif): TAGTTTYAKCTTT Alignment: AAAGRTMAAACTA -AAGGTCAC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 64 PPARGRXRA Original Motif Original Motif Backward 7 8 0.0495607 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA -AAGGTCAC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 24 Motif 24 Reverse Complement Reverse Complement Forward 4 8 0.0539119 Consensus sequence (original motif): AAAGWCATWAA Consensus sequence (reverse complement motif): TTWATGWCTTT Alignment: TTWATGWCTTT ---GTGACCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Original Motif Forward 7 8 0.0557243 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: CACTGTGRTRTCACAGTGSWSCACT ------AAGGTCAC----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 52 NR2F1 Original Motif Reverse Complement Forward 7 8 0.0564874 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: AKGYYCAAAGRTCA ------AAGGTCAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 35 Motif 35 Reverse Complement Original Motif Forward 2 8 0.0566591 Consensus sequence (original motif): AGATGYTCTTG Consensus sequence (reverse complement motif): CAAGAKCATCT Alignment: AGATGYTCTTG -GTGACCTT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 48 Motif name: Motif 48 Consensus sequence (original motif): GCARRGGSAGS Consensus sequence (reverse complement motif): SCTSCCKMTGC ************************************************************** Best Matches for Significant Motif ID 48 (Highest to Lowest) ************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 1 Motif 1 Original Motif Reverse Complement Forward 1 11 0 Consensus sequence (original motif): CYTSCCTCTGC Consensus sequence (reverse complement motif): GCAGAGGSAKG Alignment: GCAGAGGSAKG GCARRGGSAGS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 90 TFM2 Original Motif Reverse Complement Forward 1 11 0.000952693 Consensus sequence (original motif): CHHCHBTCCTSCYTCTGC Consensus sequence (reverse complement motif): GCAGAKGSAGGABDGHDG Alignment: GCAGAKGSAGGABDGHDG GCARRGGSAGS------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 66 CTCF Original Motif Original Motif Backward 3 11 0.033658 Consensus sequence (original motif): YDRCCASYAGRKGGCRSYV Consensus sequence (reverse complement motif): BMSMGCCYMCTKSTGGMHM Alignment: YDRCCASYAGRKGGCRSYV ------GCARRGGSAGS-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 88 TFF11 Reverse Complement Original Motif Forward 3 11 0.0410341 Consensus sequence (original motif): CTGCTGBDBBDGBD Consensus sequence (reverse complement motif): HVCDBBDBCAGCAG Alignment: CTGCTGBDBBDGBD --SCTSCCKMTGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 93 TFM12 Original Motif Original Motif Backward 6 11 0.0422459 Consensus sequence (original motif): RAGKGMAGVRRGSRCASAGV Consensus sequence (reverse complement motif): VCTSTGKSCMKBCTRCYCTK Alignment: RAGKGMAGVRRGSRCASAGV ----GCARRGGSAGS----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 65 Tcfcp2l1 Reverse Complement Original Motif Forward 1 11 0.0533531 Consensus sequence (original motif): CCAGYYHVADCCRG Consensus sequence (reverse complement motif): CKGGDTBDMMCTGG Alignment: CCAGYYHVADCCRG SCTSCCKMTGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Reverse Complement Reverse Complement Forward 4 11 0.0578944 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA ---SCTSCCKMTGC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Original Motif Original Motif Forward 3 11 0.0620615 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY --GCARRGGSAGS------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 3 Motif 3 Original Motif Original Motif Forward 1 11 0.0627554 Consensus sequence (original motif): HCAGRRVACASAG Consensus sequence (reverse complement motif): CTSTGTBKMCTGH Alignment: HCAGRRVACASAG GCARRGGSAGS-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 ESR2 Reverse Complement Original Motif Backward 5 11 0.0646979 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: VHRGGTCABDBTGMCCTB ---SCTSCCKMTGC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 78 Motif name: ssGCkTGCssk Consensus sequence (original motif): SSGCKTGCSSK Consensus sequence (reverse complement motif): YSSGCAYGCSS ************************************************************** Best Matches for Significant Motif ID 78 (Highest to Lowest) ************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 82 gCGCGCsCgsG Original Motif Original Motif Backward 1 11 0.0230178 Consensus sequence (original motif): GCGCGCSCGCG Consensus sequence (reverse complement motif): CGCGSGCGCGC Alignment: GCGCGCSCGCG SSGCKTGCSSK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 74 ssCCCCGCSssk Reverse Complement Reverse Complement Forward 2 11 0.036087 Consensus sequence (original motif): SBCCCCGCCSBB Consensus sequence (reverse complement motif): BBSGGCGGGGBS Alignment: BBSGGCGGGGBS -YSSGCAYGCSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 68 sscCCCGCGcs Reverse Complement Reverse Complement Backward 1 11 0.0375477 Consensus sequence (original motif): BSCCCCGCGBS Consensus sequence (reverse complement motif): SBCGCGGGGSB Alignment: SBCGCGGGGSB YSSGCAYGCSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 79 cCGCGGrCACG Original Motif Original Motif Backward 1 11 0.0461039 Consensus sequence (original motif): CCGCGGRCACG Consensus sequence (reverse complement motif): CGTGKCCGCGG Alignment: CCGCGGRCACG SSGCKTGCSSK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 21 Motif 21 Original Motif Original Motif Backward 2 11 0.0529221 Consensus sequence (original motif): CTGCTTTCCMAA Consensus sequence (reverse complement motif): TTYGGAAAGCAG Alignment: CTGCTTTCCMAA SSGCKTGCSSK- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 66 CTCF Original Motif Original Motif Forward 8 11 0.0533963 Consensus sequence (original motif): YDRCCASYAGRKGGCRSYV Consensus sequence (reverse complement motif): BMSMGCCYMCTKSTGGMHM Alignment: YDRCCASYAGRKGGCRSYV -------SSGCKTGCSSK- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 54 Esrrb Reverse Complement Original Motif Forward 2 11 0.0543224 Consensus sequence (original motif): VBBYCAAGGTCA Consensus sequence (reverse complement motif): TGACCTTGMBBB Alignment: VBBYCAAGGTCA -YSSGCAYGCSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 ESR2 Reverse Complement Original Motif Backward 3 11 0.0563598 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: VHRGGTCABDBTGMCCTB -----YSSGCAYGCSS-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Reverse Complement Original Motif Backward 10 11 0.0593846 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC -YSSGCAYGCSS--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 64 PPARGRXRA Reverse Complement Original Motif Forward 3 11 0.0598714 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA --YSSGCAYGCSS-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 79 Motif name: cCGCGGrCACG Consensus sequence (original motif): CCGCGGRCACG Consensus sequence (reverse complement motif): CGTGKCCGCGG ************************************************************** Best Matches for Significant Motif ID 79 (Highest to Lowest) ************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 82 gCGCGCsCgsG Original Motif Original Motif Backward 1 11 0.010473 Consensus sequence (original motif): GCGCGCSCGCG Consensus sequence (reverse complement motif): CGCGSGCGCGC Alignment: GCGCGCSCGCG CCGCGGRCACG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 88 TFF11 Reverse Complement Reverse Complement Backward 1 11 0.0478408 Consensus sequence (original motif): CTGCTGBDBBDGBD Consensus sequence (reverse complement motif): HVCDBBDBCAGCAG Alignment: HVCDBBDBCAGCAG ---CGTGKCCGCGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Original Motif Original Motif Backward 4 11 0.0484441 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC -------CCGCGGRCACG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Reverse Complement Reverse Complement Backward 3 11 0.0486581 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV -------CGTGKCCGCGG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 78 ssGCkTGCssk Original Motif Original Motif Backward 1 11 0.0503056 Consensus sequence (original motif): SSGCKTGCSSK Consensus sequence (reverse complement motif): YSSGCAYGCSS Alignment: SSGCKTGCSSK CCGCGGRCACG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 74 ssCCCCGCSssk Reverse Complement Reverse Complement Backward 2 11 0.055777 Consensus sequence (original motif): SBCCCCGCCSBB Consensus sequence (reverse complement motif): BBSGGCGGGGBS Alignment: BBSGGCGGGGBS CGTGKCCGCGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 66 CTCF Original Motif Original Motif Forward 8 11 0.0588663 Consensus sequence (original motif): YDRCCASYAGRKGGCRSYV Consensus sequence (reverse complement motif): BMSMGCCYMCTKSTGGMHM Alignment: YDRCCASYAGRKGGCRSYV -------CCGCGGRCACG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 3 Motif 3 Original Motif Original Motif Forward 2 11 0.0597806 Consensus sequence (original motif): HCAGRRVACASAG Consensus sequence (reverse complement motif): CTSTGTBKMCTGH Alignment: HCAGRRVACASAG -CCGCGGRCACG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 2 Motif 2 Reverse Complement Reverse Complement Backward 3 11 0.0624268 Consensus sequence (original motif): ACACACACACACAC Consensus sequence (reverse complement motif): GTGTGTGTGTGTGT Alignment: GTGTGTGTGTGTGT -CGTGKCCGCGG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 93 TFM12 Original Motif Original Motif Backward 5 11 0.0625015 Consensus sequence (original motif): RAGKGMAGVRRGSRCASAGV Consensus sequence (reverse complement motif): VCTSTGKSCMKBCTRCYCTK Alignment: RAGKGMAGVRRGSRCASAGV -----CCGCGGRCACG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- **************************************************************************************************************************************************************************************************** ********************************************************************** Best Matches for Each Motif (Highest to Lowest) ***************************************************************************** Dataset #: 1 Motif ID: 1 Motif name: Motif 1 Consensus sequence (original motif): CYTSCCTCTGC Consensus sequence (reverse complement motif): GCAGAGGSAKG ************************************************************************ Best Matches for Motif ID 1 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 90 TFM2 Original Motif Original Motif Forward 8 11 0 Consensus sequence (original motif): CHHCHBTCCTSCYTCTGC Consensus sequence (reverse complement motif): GCAGAKGSAGGABDGHDG Alignment: CHHCHBTCCTSCYTCTGC -------CYTSCCTCTGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 48 Motif 48 Original Motif Reverse Complement Forward 1 11 0.0204179 Consensus sequence (original motif): GCARRGGSAGS Consensus sequence (reverse complement motif): SCTSCCKMTGC Alignment: SCTSCCKMTGC CYTSCCTCTGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 88 TFF11 Original Motif Original Motif Forward 3 11 0.0606594 Consensus sequence (original motif): CTGCTGBDBBDGBD Consensus sequence (reverse complement motif): HVCDBBDBCAGCAG Alignment: CTGCTGBDBBDGBD --CYTSCCTCTGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 93 TFM12 Reverse Complement Original Motif Backward 6 11 0.0635403 Consensus sequence (original motif): RAGKGMAGVRRGSRCASAGV Consensus sequence (reverse complement motif): VCTSTGKSCMKBCTRCYCTK Alignment: RAGKGMAGVRRGSRCASAGV ----GCAGAGGSAKG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 66 CTCF Reverse Complement Original Motif Backward 3 11 0.0656459 Consensus sequence (original motif): YDRCCASYAGRKGGCRSYV Consensus sequence (reverse complement motif): BMSMGCCYMCTKSTGGMHM Alignment: YDRCCASYAGRKGGCRSYV ------GCAGAGGSAKG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Original Motif Reverse Complement Forward 4 11 0.0782887 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA ---CYTSCCTCTGC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Original Motif Reverse Complement Backward 2 11 0.0788385 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV --------CYTSCCTCTGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 64 PPARGRXRA Original Motif Reverse Complement Forward 4 11 0.0823596 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: TGRCCTKTGHCCKAB ---CYTSCCTCTGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 65 Tcfcp2l1 Original Motif Original Motif Forward 1 11 0.0826758 Consensus sequence (original motif): CCAGYYHVADCCRG Consensus sequence (reverse complement motif): CKGGDTBDMMCTGG Alignment: CCAGYYHVADCCRG CYTSCCTCTGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 47 Motif 47 Original Motif Original Motif Backward 2 11 0.0840726 Consensus sequence (original motif): YGCCACCTDSTGGY Consensus sequence (reverse complement motif): KCCASDAGGTGGCK Alignment: YGCCACCTDSTGGY --CYTSCCTCTGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 74 ssCCCCGCSssk Reverse Complement Reverse Complement Backward 1 11 0.0843055 Consensus sequence (original motif): SBCCCCGCCSBB Consensus sequence (reverse complement motif): BBSGGCGGGGBS Alignment: BBSGGCGGGGBS -GCAGAGGSAKG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 2 Motif name: Motif 2 Consensus sequence (original motif): ACACACACACACAC Consensus sequence (reverse complement motif): GTGTGTGTGTGTGT ************************************************************************ Best Matches for Motif ID 2 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 89 TFM1 Reverse Complement Reverse Complement Backward 4 14 0 Consensus sequence (original motif): CACACACACACWCACACA Consensus sequence (reverse complement motif): TGTGTGWGTGTGTGTGTG Alignment: TGTGTGWGTGTGTGTGTG -GTGTGTGTGTGTGT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 92 TFM11 Original Motif Original Motif Backward 2 14 0.00332777 Consensus sequence (original motif): CAMACACACACAYDCACACA Consensus sequence (reverse complement motif): TGTGTGDKTGTGTGTGTRTG Alignment: CAMACACACACAYDCACACA -----ACACACACACACAC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Reverse Complement Reverse Complement Forward 2 14 0.0819161 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: AGTGSWSCACTGTGAMAMCACAGTG -GTGTGTGTGTGTGT---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 91 TFM3 Reverse Complement Original Motif Backward 4 14 0.082111 Consensus sequence (original motif): KTTTTTTKTTTTTTDAAB Consensus sequence (reverse complement motif): BTTHAAAAAAYAAAAAAR Alignment: KTTTTTTKTTTTTTDAAB -GTGTGTGTGTGTGT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 6 Motif 6 Reverse Complement Reverse Complement Forward 2 13 0.531086 Consensus sequence (original motif): CASABACWSACACA Consensus sequence (reverse complement motif): TGTGTSWGTBTSTG Alignment: TGTGTSWGTBTSTG- -GTGTGTGTGTGTGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 94 TFM13 Reverse Complement Original Motif Backward 8 13 0.576988 Consensus sequence (original motif): TTTTTTTKTTKTTTAATTHW Consensus sequence (reverse complement motif): WHAATTAAARAARAAAAAAA Alignment: -TTTTTTTKTTKTTTAATTHW GTGTGTGTGTGTGT------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 4 Motif 4 Reverse Complement Reverse Complement Backward 2 13 0.579965 Consensus sequence (original motif): HAAAAHAAARMAAA Consensus sequence (reverse complement motif): TTTRKTTTHTTTTH Alignment: -TTTRKTTTHTTTTH GTGTGTGTGTGTGT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 88 TFF11 Reverse Complement Original Motif Forward 4 11 1.5772 Consensus sequence (original motif): CTGCTGBDBBDGBD Consensus sequence (reverse complement motif): HVCDBBDBCAGCAG Alignment: CTGCTGBDBBDGBD--- ---GTGTGTGTGTGTGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 87 TFF1 Original Motif Original Motif Forward 2 11 1.57782 Consensus sequence (original motif): AGGACAAAGAVV Consensus sequence (reverse complement motif): VVTCTTTGTCCT Alignment: AGGACAAAGAVV--- -ACACACACACACAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 83 srACyCCGAyr Reverse Complement Reverse Complement Backward 1 11 1.58018 Consensus sequence (original motif): SRACYCCGAYR Consensus sequence (reverse complement motif): KKTCGGKGTKS Alignment: ---KKTCGGKGTKS GTGTGTGTGTGTGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 3 Motif name: Motif 3 Consensus sequence (original motif): HCAGRRVACASAG Consensus sequence (reverse complement motif): CTSTGTBKMCTGH ************************************************************************ Best Matches for Motif ID 3 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 93 TFM12 Original Motif Original Motif Forward 7 13 0.00926418 Consensus sequence (original motif): RAGKGMAGVRRGSRCASAGV Consensus sequence (reverse complement motif): VCTSTGKSCMKBCTRCYCTK Alignment: RAGKGMAGVRRGSRCASAGV ------HCAGRRVACASAG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Original Motif Original Motif Forward 4 13 0.0328703 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY ---HCAGRRVACASAG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Reverse Complement Backward 3 13 0.0400966 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: AGTGSWSCACTGTGAMAMCACAGTG ----------HCAGRRVACASAG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 90 TFM2 Original Motif Reverse Complement Forward 3 13 0.0435274 Consensus sequence (original motif): CHHCHBTCCTSCYTCTGC Consensus sequence (reverse complement motif): GCAGAKGSAGGABDGHDG Alignment: GCAGAKGSAGGABDGHDG --HCAGRRVACASAG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 66 CTCF Original Motif Original Motif Forward 7 13 0.0448341 Consensus sequence (original motif): YDRCCASYAGRKGGCRSYV Consensus sequence (reverse complement motif): BMSMGCCYMCTKSTGGMHM Alignment: YDRCCASYAGRKGGCRSYV ------HCAGRRVACASAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Reverse Complement Reverse Complement Forward 4 13 0.045698 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: CCACTGTGVTGTCACAGTGCTCCA ---CTSTGTBKMCTGH-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 64 PPARGRXRA Original Motif Original Motif Forward 1 13 0.0457253 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA HCAGRRVACASAG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 65 Tcfcp2l1 Reverse Complement Reverse Complement Forward 1 13 0.0477557 Consensus sequence (original motif): CCAGYYHVADCCRG Consensus sequence (reverse complement motif): CKGGDTBDMMCTGG Alignment: CKGGDTBDMMCTGG CTSTGTBKMCTGH- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 94 TFM13 Original Motif Reverse Complement Backward 4 13 0.0478998 Consensus sequence (original motif): TTTTTTTKTTKTTTAATTHW Consensus sequence (reverse complement motif): WHAATTAAARAARAAAAAAA Alignment: WHAATTAAARAARAAAAAAA ----HCAGRRVACASAG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 88 TFF11 Original Motif Reverse Complement Forward 2 13 0.048132 Consensus sequence (original motif): CTGCTGBDBBDGBD Consensus sequence (reverse complement motif): HVCDBBDBCAGCAG Alignment: HVCDBBDBCAGCAG -HCAGRRVACASAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 4 Motif name: Motif 4 Consensus sequence (original motif): HAAAAHAAARMAAA Consensus sequence (reverse complement motif): TTTRKTTTHTTTTH ************************************************************************ Best Matches for Motif ID 4 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 94 TFM13 Original Motif Reverse Complement Forward 6 14 0.0333546 Consensus sequence (original motif): TTTTTTTKTTKTTTAATTHW Consensus sequence (reverse complement motif): WHAATTAAARAARAAAAAAA Alignment: WHAATTAAARAARAAAAAAA -----HAAAAHAAARMAAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 91 TFM3 Original Motif Reverse Complement Forward 4 14 0.0408482 Consensus sequence (original motif): KTTTTTTKTTTTTTDAAB Consensus sequence (reverse complement motif): BTTHAAAAAAYAAAAAAR Alignment: BTTHAAAAAAYAAAAAAR ---HAAAAHAAARMAAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 49 Motif 49 Original Motif Original Motif Forward 1 14 0.0486607 Consensus sequence (original motif): AAAAAAAAAAAAAT Consensus sequence (reverse complement motif): ATTTTTTTTTTTTT Alignment: AAAAAAAAAAAAAT HAAAAHAAARMAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 33 Motif 33 Reverse Complement Original Motif Backward 1 14 0.0540179 Consensus sequence (original motif): TTTAATGTYTTTWA Consensus sequence (reverse complement motif): TWAAAKACATTAAA Alignment: TTTAATGTYTTTWA TTTRKTTTHTTTTH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 92 TFM11 Reverse Complement Reverse Complement Backward 5 14 0.0882898 Consensus sequence (original motif): CAMACACACACAYDCACACA Consensus sequence (reverse complement motif): TGTGTGDKTGTGTGTGTRTG Alignment: TGTGTGDKTGTGTGTGTRTG --TTTRKTTTHTTTTH---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 89 TFM1 Original Motif Original Motif Forward 1 14 0.0933036 Consensus sequence (original motif): CACACACACACWCACACA Consensus sequence (reverse complement motif): TGTGTGWGTGTGTGTGTG Alignment: CACACACACACWCACACA HAAAAHAAARMAAA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 6 Motif 6 Original Motif Original Motif Backward 1 14 0.0942815 Consensus sequence (original motif): CASABACWSACACA Consensus sequence (reverse complement motif): TGTGTSWGTBTSTG Alignment: CASABACWSACACA HAAAAHAAARMAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 93 TFM12 Original Motif Original Motif Backward 3 14 0.096284 Consensus sequence (original motif): RAGKGMAGVRRGSRCASAGV Consensus sequence (reverse complement motif): VCTSTGKSCMKBCTRCYCTK Alignment: RAGKGMAGVRRGSRCASAGV ----HAAAAHAAARMAAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 45 Motif 45 Reverse Complement Original Motif Backward 2 13 0.563221 Consensus sequence (original motif): TAASTCTWTTTTAA Consensus sequence (reverse complement motif): TTAAAAWAGASTTA Alignment: -TAASTCTWTTTTAA TTTRKTTTHTTTTH- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 15 Motif 15 Original Motif Original Motif Forward 1 13 0.572837 Consensus sequence (original motif): AAAGRTMAAACTA Consensus sequence (reverse complement motif): TAGTTTYAKCTTT Alignment: AAAGRTMAAACTA- HAAAAHAAARMAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 5 Motif name: Motif 5 Consensus sequence (original motif): CWGAGCCAYCTYTC Consensus sequence (reverse complement motif): GAKAGKTGGCTCWG ************************************************************************ Best Matches for Motif ID 5 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 66 CTCF Reverse Complement Original Motif Backward 1 14 0.0474988 Consensus sequence (original motif): YDRCCASYAGRKGGCRSYV Consensus sequence (reverse complement motif): BMSMGCCYMCTKSTGGMHM Alignment: YDRCCASYAGRKGGCRSYV -----GAKAGKTGGCTCWG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Reverse Complement Reverse Complement Backward 8 14 0.0554531 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: CCACTGTGVTGTCACAGTGCTCCA ---GAKAGKTGGCTCWG------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 93 TFM12 Original Motif Reverse Complement Forward 4 14 0.0576317 Consensus sequence (original motif): RAGKGMAGVRRGSRCASAGV Consensus sequence (reverse complement motif): VCTSTGKSCMKBCTRCYCTK Alignment: VCTSTGKSCMKBCTRCYCTK ---CWGAGCCAYCTYTC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 AgTGCTCCACTGTGgTGTCACAgT Original Motif Reverse Complement Forward 2 14 0.0576632 Consensus sequence (original motif): AGTGCTCCACTGTGGTGTCACAGT Consensus sequence (reverse complement motif): ACTGTGACACCACAGTGGAGCACT Alignment: ACTGTGACACCACAGTGGAGCACT -CWGAGCCAYCTYTC--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 71 AmTGTGACACCACAGT Original Motif Original Motif Backward 2 14 0.0578361 Consensus sequence (original motif): AMTGTGACACCACAGT Consensus sequence (reverse complement motif): ACTGTGGTGTCACART Alignment: AMTGTGACACCACAGT -CWGAGCCAYCTYTC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Reverse Complement Backward 3 14 0.065312 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: AGTGSWSCACTGTGAMAMCACAGTG ---------CWGAGCCAYCTYTC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 ESR2 Original Motif Original Motif Forward 1 14 0.0658518 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: VHRGGTCABDBTGMCCTB CWGAGCCAYCTYTC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Original Motif Reverse Complement Backward 3 14 0.0671359 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV ----CWGAGCCAYCTYTC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 TgTGgTGTCACAGTGCTCC Original Motif Reverse Complement Forward 7 13 0.538291 Consensus sequence (original motif): TGTGGTGTCACAGTGCTCC Consensus sequence (reverse complement motif): GGAGCACTGTGACACCACA Alignment: GGAGCACTGTGACACCACA- ------CWGAGCCAYCTYTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 65 Tcfcp2l1 Reverse Complement Reverse Complement Backward 2 13 0.560622 Consensus sequence (original motif): CCAGYYHVADCCRG Consensus sequence (reverse complement motif): CKGGDTBDMMCTGG Alignment: -CKGGDTBDMMCTGG GAKAGKTGGCTCWG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 6 Motif name: Motif 6 Consensus sequence (original motif): CASABACWSACACA Consensus sequence (reverse complement motif): TGTGTSWGTBTSTG ************************************************************************ Best Matches for Motif ID 6 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 92 TFM11 Reverse Complement Reverse Complement Forward 1 14 0.0383879 Consensus sequence (original motif): CAMACACACACAYDCACACA Consensus sequence (reverse complement motif): TGTGTGDKTGTGTGTGTRTG Alignment: TGTGTGDKTGTGTGTGTRTG TGTGTSWGTBTSTG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 89 TFM1 Reverse Complement Reverse Complement Forward 1 14 0.0411352 Consensus sequence (original motif): CACACACACACWCACACA Consensus sequence (reverse complement motif): TGTGTGWGTGTGTGTGTG Alignment: TGTGTGWGTGTGTGTGTG TGTGTSWGTBTSTG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Reverse Complement Reverse Complement Backward 3 14 0.0803592 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA -----TGTGTSWGTBTSTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 ESR2 Reverse Complement Original Motif Backward 4 14 0.0865284 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: VHRGGTCABDBTGMCCTB -TGTGTSWGTBTSTG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 TgTGgTGTCACAGTGCTCC Reverse Complement Original Motif Forward 4 14 0.0874787 Consensus sequence (original motif): TGTGGTGTCACAGTGCTCC Consensus sequence (reverse complement motif): GGAGCACTGTGACACCACA Alignment: TGTGGTGTCACAGTGCTCC ---TGTGTSWGTBTSTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 94 TFM13 Reverse Complement Original Motif Backward 6 14 0.0913053 Consensus sequence (original motif): TTTTTTTKTTKTTTAATTHW Consensus sequence (reverse complement motif): WHAATTAAARAARAAAAAAA Alignment: TTTTTTTKTTKTTTAATTHW -TGTGTSWGTBTSTG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Reverse Complement Reverse Complement Backward 4 14 0.0930634 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: CCACTGTGVTGTCACAGTGCTCCA -------TGTGTSWGTBTSTG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 4 Motif 4 Original Motif Original Motif Forward 1 14 0.0933886 Consensus sequence (original motif): HAAAAHAAARMAAA Consensus sequence (reverse complement motif): TTTRKTTTHTTTTH Alignment: HAAAAHAAARMAAA CASABACWSACACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 91 TFM3 Reverse Complement Original Motif Forward 1 14 0.0935906 Consensus sequence (original motif): KTTTTTTKTTTTTTDAAB Consensus sequence (reverse complement motif): BTTHAAAAAAYAAAAAAR Alignment: KTTTTTTKTTTTTTDAAB TGTGTSWGTBTSTG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 AgTGCTCCACTGTGgTGTCACAgT Original Motif Reverse Complement Forward 11 14 0.0939701 Consensus sequence (original motif): AGTGCTCCACTGTGGTGTCACAGT Consensus sequence (reverse complement motif): ACTGTGACACCACAGTGGAGCACT Alignment: ACTGTGACACCACAGTGGAGCACT ----------CASABACWSACACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 7 Motif name: Motif 7 Consensus sequence (original motif): AAAATKCTATT Consensus sequence (reverse complement motif): AATAGYATTTT ************************************************************************ Best Matches for Motif ID 7 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 25 Motif 25 Original Motif Reverse Complement Backward 1 11 0.0795455 Consensus sequence (original motif): AATAACAGATT Consensus sequence (reverse complement motif): AATCTGTTATT Alignment: AATCTGTTATT AAAATKCTATT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 13 Motif 13 Original Motif Reverse Complement Backward 1 11 0.0795455 Consensus sequence (original motif): AAWATRTATTT Consensus sequence (reverse complement motif): AAATAKATWTT Alignment: AAATAKATWTT AAAATKCTATT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 45 Motif 45 Reverse Complement Original Motif Backward 3 11 0.0909091 Consensus sequence (original motif): TAASTCTWTTTTAA Consensus sequence (reverse complement motif): TTAAAAWAGASTTA Alignment: TAASTCTWTTTTAA -AATAGYATTTT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 12 Motif 12 Reverse Complement Reverse Complement Forward 1 11 0.102273 Consensus sequence (original motif): ACAACACATTT Consensus sequence (reverse complement motif): AAATGTGTTGT Alignment: AAATGTGTTGT AATAGYATTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 33 Motif 33 Original Motif Reverse Complement Backward 4 11 0.102273 Consensus sequence (original motif): TTTAATGTYTTTWA Consensus sequence (reverse complement motif): TWAAAKACATTAAA Alignment: TWAAAKACATTAAA AAAATKCTATT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 15 Motif 15 Reverse Complement Reverse Complement Backward 2 11 0.102273 Consensus sequence (original motif): AAAGRTMAAACTA Consensus sequence (reverse complement motif): TAGTTTYAKCTTT Alignment: TAGTTTYAKCTTT -AATAGYATTTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 49 Motif 49 Reverse Complement Reverse Complement Forward 1 11 0.102273 Consensus sequence (original motif): AAAAAAAAAAAAAT Consensus sequence (reverse complement motif): ATTTTTTTTTTTTT Alignment: ATTTTTTTTTTTTT AATAGYATTTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 9 Motif 9 Original Motif Reverse Complement Forward 2 11 0.102273 Consensus sequence (original motif): AACATATTTTCA Consensus sequence (reverse complement motif): TGAAAATATGTT Alignment: TGAAAATATGTT -AAAATKCTATT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 11 Motif 11 Reverse Complement Reverse Complement Forward 2 11 0.113636 Consensus sequence (original motif): AAMATGTTTMAA Consensus sequence (reverse complement motif): TTYAAACATYTT Alignment: TTYAAACATYTT -AATAGYATTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 10 Motif 10 Original Motif Original Motif Forward 1 11 0.113636 Consensus sequence (original motif): AAAMATTGTTT Consensus sequence (reverse complement motif): AAACAATYTTT Alignment: AAAMATTGTTT AAAATKCTATT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 8 Motif name: Motif 8 Consensus sequence (original motif): TGAAAATSCTT Consensus sequence (reverse complement motif): AAGSATTTTCA ************************************************************************ Best Matches for Motif ID 8 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 9 Motif 9 Original Motif Reverse Complement Backward 2 11 0.0681818 Consensus sequence (original motif): AACATATTTTCA Consensus sequence (reverse complement motif): TGAAAATATGTT Alignment: TGAAAATATGTT TGAAAATSCTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 33 Motif 33 Reverse Complement Original Motif Forward 4 11 0.0909091 Consensus sequence (original motif): TTTAATGTYTTTWA Consensus sequence (reverse complement motif): TWAAAKACATTAAA Alignment: TTTAATGTYTTTWA ---AAGSATTTTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 11 Motif 11 Reverse Complement Original Motif Forward 1 11 0.102273 Consensus sequence (original motif): AAMATGTTTMAA Consensus sequence (reverse complement motif): TTYAAACATYTT Alignment: AAMATGTTTMAA AAGSATTTTCA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 10 Motif 10 Original Motif Reverse Complement Forward 1 11 0.102273 Consensus sequence (original motif): AAAMATTGTTT Consensus sequence (reverse complement motif): AAACAATYTTT Alignment: AAACAATYTTT TGAAAATSCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Reverse Complement Original Motif Forward 3 11 0.111179 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: TGGAGCACTGTGACAVCACAGTGG --AAGSATTTTCA----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 TgTGgTGTCACAGTGCTCC Original Motif Original Motif Forward 8 11 0.113005 Consensus sequence (original motif): TGTGGTGTCACAGTGCTCC Consensus sequence (reverse complement motif): GGAGCACTGTGACACCACA Alignment: TGTGGTGTCACAGTGCTCC -------TGAAAATSCTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 43 Motif 43 Original Motif Reverse Complement Backward 1 11 0.113636 Consensus sequence (original motif): AAKGAAAGGCA Consensus sequence (reverse complement motif): TGCCTTTCYTT Alignment: TGCCTTTCYTT TGAAAATSCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 46 Motif 46 Original Motif Reverse Complement Forward 3 11 0.113636 Consensus sequence (original motif): ATAGGTTTAGYATA Consensus sequence (reverse complement motif): TATKCTAAACCTAT Alignment: TATKCTAAACCTAT --TGAAAATSCTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 45 Motif 45 Original Motif Reverse Complement Backward 2 11 0.113636 Consensus sequence (original motif): TAASTCTWTTTTAA Consensus sequence (reverse complement motif): TTAAAAWAGASTTA Alignment: TTAAAAWAGASTTA --TGAAAATSCTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 24 Motif 24 Original Motif Reverse Complement Backward 1 11 0.125 Consensus sequence (original motif): AAAGWCATWAA Consensus sequence (reverse complement motif): TTWATGWCTTT Alignment: TTWATGWCTTT TGAAAATSCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 9 Motif name: Motif 9 Consensus sequence (original motif): AACATATTTTCA Consensus sequence (reverse complement motif): TGAAAATATGTT ************************************************************************ Best Matches for Motif ID 9 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 11 Motif 11 Original Motif Original Motif Forward 1 12 0.0729167 Consensus sequence (original motif): AAMATGTTTMAA Consensus sequence (reverse complement motif): TTYAAACATYTT Alignment: AAMATGTTTMAA AACATATTTTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 45 Motif 45 Original Motif Original Motif Backward 1 12 0.09375 Consensus sequence (original motif): TAASTCTWTTTTAA Consensus sequence (reverse complement motif): TTAAAAWAGASTTA Alignment: TAASTCTWTTTTAA --AACATATTTTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 33 Motif 33 Original Motif Reverse Complement Backward 2 12 0.104167 Consensus sequence (original motif): TTTAATGTYTTTWA Consensus sequence (reverse complement motif): TWAAAKACATTAAA Alignment: TWAAAKACATTAAA -AACATATTTTCA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 AgTGCTCCACTGTGgTGTCACAgT Original Motif Original Motif Forward 9 12 0.120305 Consensus sequence (original motif): AGTGCTCCACTGTGGTGTCACAGT Consensus sequence (reverse complement motif): ACTGTGACACCACAGTGGAGCACT Alignment: AGTGCTCCACTGTGGTGTCACAGT --------AACATATTTTCA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 89 TFM1 Original Motif Original Motif Backward 5 12 0.12128 Consensus sequence (original motif): CACACACACACWCACACA Consensus sequence (reverse complement motif): TGTGTGWGTGTGTGTGTG Alignment: CACACACACACWCACACA --AACATATTTTCA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 71 AmTGTGACACCACAGT Reverse Complement Original Motif Forward 5 12 0.12207 Consensus sequence (original motif): AMTGTGACACCACAGT Consensus sequence (reverse complement motif): ACTGTGGTGTCACART Alignment: AMTGTGACACCACAGT ----TGAAAATATGTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Original Motif Reverse Complement Backward 11 12 0.122466 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: CCACTGTGVTGTCACAGTGCTCCA --AACATATTTTCA---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 92 TFM11 Original Motif Original Motif Backward 5 12 0.123397 Consensus sequence (original motif): CAMACACACACAYDCACACA Consensus sequence (reverse complement motif): TGTGTGDKTGTGTGTGTRTG Alignment: CAMACACACACAYDCACACA ----AACATATTTTCA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Reverse Complement Reverse Complement Backward 2 12 0.124008 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: AGTGSWSCACTGTGAMAMCACAGTG ------------TGAAAATATGTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 49 Motif 49 Original Motif Reverse Complement Backward 3 12 0.125 Consensus sequence (original motif): AAAAAAAAAAAAAT Consensus sequence (reverse complement motif): ATTTTTTTTTTTTT Alignment: ATTTTTTTTTTTTT AACATATTTTCA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 10 Motif name: Motif 10 Consensus sequence (original motif): AAAMATTGTTT Consensus sequence (reverse complement motif): AAACAATYTTT ************************************************************************ Best Matches for Motif ID 10 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 45 Motif 45 Original Motif Reverse Complement Backward 1 11 0.0700758 Consensus sequence (original motif): TAASTCTWTTTTAA Consensus sequence (reverse complement motif): TTAAAAWAGASTTA Alignment: TTAAAAWAGASTTA ---AAAMATTGTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 13 Motif 13 Original Motif Original Motif Backward 1 11 0.0700758 Consensus sequence (original motif): AAWATRTATTT Consensus sequence (reverse complement motif): AAATAKATWTT Alignment: AAWATRTATTT AAAMATTGTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 9 Motif 9 Original Motif Reverse Complement Backward 2 11 0.0814394 Consensus sequence (original motif): AACATATTTTCA Consensus sequence (reverse complement motif): TGAAAATATGTT Alignment: TGAAAATATGTT AAAMATTGTTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 8 Motif 8 Original Motif Reverse Complement Backward 1 11 0.0814394 Consensus sequence (original motif): TGAAAATSCTT Consensus sequence (reverse complement motif): AAGSATTTTCA Alignment: AAGSATTTTCA AAAMATTGTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 25 Motif 25 Original Motif Original Motif Backward 1 11 0.0814394 Consensus sequence (original motif): AATAACAGATT Consensus sequence (reverse complement motif): AATCTGTTATT Alignment: AATAACAGATT AAAMATTGTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 7 Motif 7 Original Motif Original Motif Backward 1 11 0.092803 Consensus sequence (original motif): AAAATKCTATT Consensus sequence (reverse complement motif): AATAGYATTTT Alignment: AAAATKCTATT AAAMATTGTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 33 Motif 33 Original Motif Original Motif Forward 3 11 0.092803 Consensus sequence (original motif): TTTAATGTYTTTWA Consensus sequence (reverse complement motif): TWAAAKACATTAAA Alignment: TTTAATGTYTTTWA --AAAMATTGTTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 49 Motif 49 Reverse Complement Original Motif Backward 1 11 0.092803 Consensus sequence (original motif): AAAAAAAAAAAAAT Consensus sequence (reverse complement motif): ATTTTTTTTTTTTT Alignment: AAAAAAAAAAAAAT ---AAACAATYTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 29 Motif 29 Original Motif Original Motif Backward 1 11 0.092803 Consensus sequence (original motif): ATTTATTGCTA Consensus sequence (reverse complement motif): TAGCAATAAAT Alignment: ATTTATTGCTA AAAMATTGTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 12 Motif 12 Original Motif Reverse Complement Backward 1 11 0.092803 Consensus sequence (original motif): ACAACACATTT Consensus sequence (reverse complement motif): AAATGTGTTGT Alignment: AAATGTGTTGT AAAMATTGTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 11 Motif name: Motif 11 Consensus sequence (original motif): AAMATGTTTMAA Consensus sequence (reverse complement motif): TTYAAACATYTT ************************************************************************ Best Matches for Motif ID 11 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 9 Motif 9 Original Motif Original Motif Backward 1 12 0.0479167 Consensus sequence (original motif): AACATATTTTCA Consensus sequence (reverse complement motif): TGAAAATATGTT Alignment: AACATATTTTCA AAMATGTTTMAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 33 Motif 33 Reverse Complement Original Motif Forward 1 12 0.06875 Consensus sequence (original motif): TTTAATGTYTTTWA Consensus sequence (reverse complement motif): TWAAAKACATTAAA Alignment: TTTAATGTYTTTWA TTYAAACATYTT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 45 Motif 45 Reverse Complement Reverse Complement Forward 1 12 0.0791667 Consensus sequence (original motif): TAASTCTWTTTTAA Consensus sequence (reverse complement motif): TTAAAAWAGASTTA Alignment: TTAAAAWAGASTTA TTYAAACATYTT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 91 TFM3 Reverse Complement Reverse Complement Backward 6 12 0.0830729 Consensus sequence (original motif): KTTTTTTKTTTTTTDAAB Consensus sequence (reverse complement motif): BTTHAAAAAAYAAAAAAR Alignment: BTTHAAAAAAYAAAAAAR -TTYAAACATYTT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 94 TFM13 Original Motif Reverse Complement Forward 8 12 0.0970238 Consensus sequence (original motif): TTTTTTTKTTKTTTAATTHW Consensus sequence (reverse complement motif): WHAATTAAARAARAAAAAAA Alignment: WHAATTAAARAARAAAAAAA -------AAMATGTTTMAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 60 NR1H2RXRA Reverse Complement Original Motif Forward 5 12 0.0983333 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC ----TTYAAACATYTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 49 Motif 49 Original Motif Original Motif Backward 2 12 0.1 Consensus sequence (original motif): AAAAAAAAAAAAAT Consensus sequence (reverse complement motif): ATTTTTTTTTTTTT Alignment: AAAAAAAAAAAAAT -AAMATGTTTMAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 46 Motif 46 Reverse Complement Reverse Complement Forward 4 11 0.565909 Consensus sequence (original motif): ATAGGTTTAGYATA Consensus sequence (reverse complement motif): TATKCTAAACCTAT Alignment: TATKCTAAACCTAT- ---TTYAAACATYTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 13 Motif 13 Original Motif Original Motif Forward 1 11 0.565909 Consensus sequence (original motif): AAWATRTATTT Consensus sequence (reverse complement motif): AAATAKATWTT Alignment: AAWATRTATTT- AAMATGTTTMAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 12 Motif 12 Original Motif Reverse Complement Backward 1 11 0.577273 Consensus sequence (original motif): ACAACACATTT Consensus sequence (reverse complement motif): AAATGTGTTGT Alignment: -AAATGTGTTGT AAMATGTTTMAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 12 Motif name: Motif 12 Consensus sequence (original motif): ACAACACATTT Consensus sequence (reverse complement motif): AAATGTGTTGT ************************************************************************ Best Matches for Motif ID 12 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 AgTGCTCCACTGTGgTGTCACAgT Reverse Complement Original Motif Forward 8 11 0.074904 Consensus sequence (original motif): AGTGCTCCACTGTGGTGTCACAGT Consensus sequence (reverse complement motif): ACTGTGACACCACAGTGGAGCACT Alignment: AGTGCTCCACTGTGGTGTCACAGT -------AAATGTGTTGT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Original Motif Original Motif Backward 2 11 0.0795455 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: TGGAGCACTGTGACAVCACAGTGG ------------ACAACACATTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 33 Motif 33 Original Motif Reverse Complement Forward 2 11 0.0795455 Consensus sequence (original motif): TTTAATGTYTTTWA Consensus sequence (reverse complement motif): TWAAAKACATTAAA Alignment: TWAAAKACATTAAA -ACAACACATTT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Reverse Complement Backward 1 11 0.0891053 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: AGTGSWSCACTGTGAMAMCACAGTG --------------ACAACACATTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 13 Motif 13 Original Motif Original Motif Forward 1 11 0.0909091 Consensus sequence (original motif): AAWATRTATTT Consensus sequence (reverse complement motif): AAATAKATWTT Alignment: AAWATRTATTT ACAACACATTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 45 Motif 45 Original Motif Reverse Complement Forward 3 11 0.0909091 Consensus sequence (original motif): TAASTCTWTTTTAA Consensus sequence (reverse complement motif): TTAAAAWAGASTTA Alignment: TTAAAAWAGASTTA --ACAACACATTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 7 Motif 7 Reverse Complement Reverse Complement Forward 1 11 0.102273 Consensus sequence (original motif): AAAATKCTATT Consensus sequence (reverse complement motif): AATAGYATTTT Alignment: AATAGYATTTT AAATGTGTTGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 46 Motif 46 Reverse Complement Original Motif Backward 4 11 0.102273 Consensus sequence (original motif): ATAGGTTTAGYATA Consensus sequence (reverse complement motif): TATKCTAAACCTAT Alignment: ATAGGTTTAGYATA AAATGTGTTGT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 11 Motif 11 Reverse Complement Original Motif Forward 1 11 0.102273 Consensus sequence (original motif): AAMATGTTTMAA Consensus sequence (reverse complement motif): TTYAAACATYTT Alignment: AAMATGTTTMAA AAATGTGTTGT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 9 Motif 9 Reverse Complement Original Motif Forward 1 11 0.113636 Consensus sequence (original motif): AACATATTTTCA Consensus sequence (reverse complement motif): TGAAAATATGTT Alignment: AACATATTTTCA AAATGTGTTGT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 13 Motif name: Motif 13 Consensus sequence (original motif): AAWATRTATTT Consensus sequence (reverse complement motif): AAATAKATWTT ************************************************************************ Best Matches for Motif ID 13 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 45 Motif 45 Original Motif Reverse Complement Backward 2 11 0.0795455 Consensus sequence (original motif): TAASTCTWTTTTAA Consensus sequence (reverse complement motif): TTAAAAWAGASTTA Alignment: TTAAAAWAGASTTA --AAWATRTATTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 9 Motif 9 Reverse Complement Reverse Complement Forward 2 11 0.0795455 Consensus sequence (original motif): AACATATTTTCA Consensus sequence (reverse complement motif): TGAAAATATGTT Alignment: TGAAAATATGTT -AAATAKATWTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 7 Motif 7 Original Motif Reverse Complement Backward 1 11 0.0795455 Consensus sequence (original motif): AAAATKCTATT Consensus sequence (reverse complement motif): AATAGYATTTT Alignment: AATAGYATTTT AAWATRTATTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 33 Motif 33 Reverse Complement Reverse Complement Backward 2 11 0.0909091 Consensus sequence (original motif): TTTAATGTYTTTWA Consensus sequence (reverse complement motif): TWAAAKACATTAAA Alignment: TWAAAKACATTAAA --AAATAKATWTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 12 Motif 12 Original Motif Original Motif Forward 1 11 0.0909091 Consensus sequence (original motif): ACAACACATTT Consensus sequence (reverse complement motif): AAATGTGTTGT Alignment: ACAACACATTT AAWATRTATTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 24 Motif 24 Original Motif Reverse Complement Forward 1 11 0.0909091 Consensus sequence (original motif): AAAGWCATWAA Consensus sequence (reverse complement motif): TTWATGWCTTT Alignment: TTWATGWCTTT AAWATRTATTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 11 Motif 11 Original Motif Original Motif Forward 1 11 0.0909091 Consensus sequence (original motif): AAMATGTTTMAA Consensus sequence (reverse complement motif): TTYAAACATYTT Alignment: AAMATGTTTMAA AAWATRTATTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 10 Motif 10 Original Motif Original Motif Forward 1 11 0.0909091 Consensus sequence (original motif): AAAMATTGTTT Consensus sequence (reverse complement motif): AAACAATYTTT Alignment: AAAMATTGTTT AAWATRTATTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 25 Motif 25 Original Motif Reverse Complement Backward 1 11 0.0909091 Consensus sequence (original motif): AATAACAGATT Consensus sequence (reverse complement motif): AATCTGTTATT Alignment: AATCTGTTATT AAWATRTATTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 49 Motif 49 Reverse Complement Original Motif Forward 4 11 0.102273 Consensus sequence (original motif): AAAAAAAAAAAAAT Consensus sequence (reverse complement motif): ATTTTTTTTTTTTT Alignment: AAAAAAAAAAAAAT ---AAATAKATWTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 14 Motif name: Motif 14 Consensus sequence (original motif): TAATKATATAA Consensus sequence (reverse complement motif): TTATATYATTA ************************************************************************ Best Matches for Motif ID 14 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 33 Motif 33 Reverse Complement Original Motif Backward 2 11 0.0482955 Consensus sequence (original motif): TTTAATGTYTTTWA Consensus sequence (reverse complement motif): TWAAAKACATTAAA Alignment: TTTAATGTYTTTWA --TTATATYATTA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 94 TFM13 Original Motif Reverse Complement Backward 9 11 0.0629058 Consensus sequence (original motif): TTTTTTTKTTKTTTAATTHW Consensus sequence (reverse complement motif): WHAATTAAARAARAAAAAAA Alignment: WHAATTAAARAARAAAAAAA -TAATKATATAA-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 23 Motif 23 Reverse Complement Original Motif Forward 2 11 0.0710227 Consensus sequence (original motif): ATGTWTTCATTMAT Consensus sequence (reverse complement motif): ATYAATGAAWACAT Alignment: ATGTWTTCATTMAT -TTATATYATTA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 29 Motif 29 Reverse Complement Original Motif Backward 1 11 0.0710227 Consensus sequence (original motif): ATTTATTGCTA Consensus sequence (reverse complement motif): TAGCAATAAAT Alignment: ATTTATTGCTA TTATATYATTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 16 Motif 16 Original Motif Reverse Complement Backward 2 11 0.0710227 Consensus sequence (original motif): TCTKTGTCAAWA Consensus sequence (reverse complement motif): TWTTGACAYAGA Alignment: TWTTGACAYAGA TAATKATATAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 9 Motif 9 Original Motif Reverse Complement Backward 1 11 0.0710227 Consensus sequence (original motif): AACATATTTTCA Consensus sequence (reverse complement motif): TGAAAATATGTT Alignment: TGAAAATATGTT -TAATKATATAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 49 Motif 49 Reverse Complement Reverse Complement Backward 1 11 0.0710227 Consensus sequence (original motif): AAAAAAAAAAAAAT Consensus sequence (reverse complement motif): ATTTTTTTTTTTTT Alignment: ATTTTTTTTTTTTT ---TTATATYATTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 91 TFM3 Reverse Complement Original Motif Forward 6 11 0.0752841 Consensus sequence (original motif): KTTTTTTKTTTTTTDAAB Consensus sequence (reverse complement motif): BTTHAAAAAAYAAAAAAR Alignment: KTTTTTTKTTTTTTDAAB -----TTATATYATTA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 4 Motif 4 Reverse Complement Reverse Complement Forward 2 11 0.0778409 Consensus sequence (original motif): HAAAAHAAARMAAA Consensus sequence (reverse complement motif): TTTRKTTTHTTTTH Alignment: TTTRKTTTHTTTTH -TTATATYATTA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 45 Motif 45 Original Motif Original Motif Forward 1 11 0.0823864 Consensus sequence (original motif): TAASTCTWTTTTAA Consensus sequence (reverse complement motif): TTAAAAWAGASTTA Alignment: TAASTCTWTTTTAA TAATKATATAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 15 Motif name: Motif 15 Consensus sequence (original motif): AAAGRTMAAACTA Consensus sequence (reverse complement motif): TAGTTTYAKCTTT ************************************************************************ Best Matches for Motif ID 15 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 46 Motif 46 Reverse Complement Original Motif Backward 1 13 0.0865385 Consensus sequence (original motif): ATAGGTTTAGYATA Consensus sequence (reverse complement motif): TATKCTAAACCTAT Alignment: ATAGGTTTAGYATA -TAGTTTYAKCTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 60 NR1H2RXRA Original Motif Original Motif Forward 1 13 0.0938462 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC AAAGRTMAAACTA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 49 Motif 49 Reverse Complement Reverse Complement Forward 2 13 0.0961538 Consensus sequence (original motif): AAAAAAAAAAAAAT Consensus sequence (reverse complement motif): ATTTTTTTTTTTTT Alignment: ATTTTTTTTTTTTT -TAGTTTYAKCTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 4 Motif 4 Original Motif Original Motif Forward 1 13 0.100962 Consensus sequence (original motif): HAAAAHAAARMAAA Consensus sequence (reverse complement motif): TTTRKTTTHTTTTH Alignment: HAAAAHAAARMAAA AAAGRTMAAACTA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 94 TFM13 Original Motif Reverse Complement Forward 7 13 0.101648 Consensus sequence (original motif): TTTTTTTKTTKTTTAATTHW Consensus sequence (reverse complement motif): WHAATTAAARAARAAAAAAA Alignment: WHAATTAAARAARAAAAAAA ------AAAGRTMAAACTA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 91 TFM3 Reverse Complement Original Motif Forward 1 13 0.110577 Consensus sequence (original motif): KTTTTTTKTTTTTTDAAB Consensus sequence (reverse complement motif): BTTHAAAAAAYAAAAAAR Alignment: KTTTTTTKTTTTTTDAAB TAGTTTYAKCTTT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 23 Motif 23 Reverse Complement Original Motif Backward 1 13 0.125 Consensus sequence (original motif): ATGTWTTCATTMAT Consensus sequence (reverse complement motif): ATYAATGAAWACAT Alignment: ATGTWTTCATTMAT -TAGTTTYAKCTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 45 Motif 45 Original Motif Reverse Complement Forward 2 13 0.125 Consensus sequence (original motif): TAASTCTWTTTTAA Consensus sequence (reverse complement motif): TTAAAAWAGASTTA Alignment: TTAAAAWAGASTTA -AAAGRTMAAACTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 5 Motif 5 Original Motif Reverse Complement Forward 1 13 0.125 Consensus sequence (original motif): CWGAGCCAYCTYTC Consensus sequence (reverse complement motif): GAKAGKTGGCTCWG Alignment: GAKAGKTGGCTCWG AAAGRTMAAACTA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 22 Motif 22 Original Motif Reverse Complement Backward 3 12 0.614583 Consensus sequence (original motif): TTTATGGTGAGCAT Consensus sequence (reverse complement motif): ATGCTCACCATAAA Alignment: -ATGCTCACCATAAA AAAGRTMAAACTA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 16 Motif name: Motif 16 Consensus sequence (original motif): TCTKTGTCAAWA Consensus sequence (reverse complement motif): TWTTGACAYAGA ************************************************************************ Best Matches for Motif ID 16 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Original Motif Original Motif Forward 7 12 0.100225 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: TGGAGCACTGTGACAVCACAGTGG ------TCTKTGTCAAWA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Reverse Complement Forward 9 12 0.100694 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: AGTGSWSCACTGTGAMAMCACAGTG --------TCTKTGTCAAWA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 TgTGgTGTCACAGTGCTCC Reverse Complement Original Motif Forward 3 12 0.102141 Consensus sequence (original motif): TGTGGTGTCACAGTGCTCC Consensus sequence (reverse complement motif): GGAGCACTGTGACACCACA Alignment: TGTGGTGTCACAGTGCTCC --TWTTGACAYAGA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 AgTGCTCCACTGTGgTGTCACAgT Reverse Complement Original Motif Forward 13 12 0.103433 Consensus sequence (original motif): AGTGCTCCACTGTGGTGTCACAGT Consensus sequence (reverse complement motif): ACTGTGACACCACAGTGGAGCACT Alignment: AGTGCTCCACTGTGGTGTCACAGT ------------TWTTGACAYAGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 71 AmTGTGACACCACAGT Original Motif Original Motif Forward 1 12 0.104492 Consensus sequence (original motif): AMTGTGACACCACAGT Consensus sequence (reverse complement motif): ACTGTGGTGTCACART Alignment: AMTGTGACACCACAGT TCTKTGTCAAWA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 91 TFM3 Original Motif Original Motif Forward 5 12 0.11849 Consensus sequence (original motif): KTTTTTTKTTTTTTDAAB Consensus sequence (reverse complement motif): BTTHAAAAAAYAAAAAAR Alignment: KTTTTTTKTTTTTTDAAB ----TCTKTGTCAAWA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 94 TFM13 Original Motif Original Motif Forward 8 12 0.119048 Consensus sequence (original motif): TTTTTTTKTTKTTTAATTHW Consensus sequence (reverse complement motif): WHAATTAAARAARAAAAAAA Alignment: TTTTTTTKTTKTTTAATTHW -------TCTKTGTCAAWA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 64 PPARGRXRA Original Motif Reverse Complement Forward 4 12 0.121043 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: TGRCCTKTGHCCKAB ---TCTKTGTCAAWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 60 NR1H2RXRA Original Motif Reverse Complement Backward 1 12 0.121667 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: GTTGACCTTTGACCTTT -----TCTKTGTCAAWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 33 Motif 33 Reverse Complement Reverse Complement Forward 2 12 0.125 Consensus sequence (original motif): TTTAATGTYTTTWA Consensus sequence (reverse complement motif): TWAAAKACATTAAA Alignment: TWAAAKACATTAAA -TWTTGACAYAGA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 17 Motif name: Motif 17 Consensus sequence (original motif): CTTCTGACCTC Consensus sequence (reverse complement motif): GAGGTCAGAAG ************************************************************************ Best Matches for Motif ID 17 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 60 NR1H2RXRA Reverse Complement Original Motif Backward 6 11 0.0348052 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC -GAGGTCAGAAG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 64 PPARGRXRA Reverse Complement Original Motif Backward 4 11 0.0792232 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA -GAGGTCAGAAG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 24 Motif 24 Original Motif Reverse Complement Backward 1 11 0.0793506 Consensus sequence (original motif): AAAGWCATWAA Consensus sequence (reverse complement motif): TTWATGWCTTT Alignment: TTWATGWCTTT CTTCTGACCTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 21 Motif 21 Original Motif Original Motif Forward 1 11 0.0793506 Consensus sequence (original motif): CTGCTTTCCMAA Consensus sequence (reverse complement motif): TTYGGAAAGCAG Alignment: CTGCTTTCCMAA CTTCTGACCTC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 22 Motif 22 Original Motif Reverse Complement Forward 1 11 0.0793506 Consensus sequence (original motif): TTTATGGTGAGCAT Consensus sequence (reverse complement motif): ATGCTCACCATAAA Alignment: ATGCTCACCATAAA CTTCTGACCTC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 15 Motif 15 Original Motif Reverse Complement Forward 2 11 0.0793506 Consensus sequence (original motif): AAAGRTMAAACTA Consensus sequence (reverse complement motif): TAGTTTYAKCTTT Alignment: TAGTTTYAKCTTT -CTTCTGACCTC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 ESR2 Original Motif Reverse Complement Backward 2 11 0.0794143 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: BAGGYCABHBTGACCKHV ------CTTCTGACCTC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 AgTGCTCCACTGTGgTGTCACAgT Original Motif Reverse Complement Forward 1 11 0.0799909 Consensus sequence (original motif): AGTGCTCCACTGTGGTGTCACAGT Consensus sequence (reverse complement motif): ACTGTGACACCACAGTGGAGCACT Alignment: ACTGTGACACCACAGTGGAGCACT CTTCTGACCTC------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 71 AmTGTGACACCACAGT Reverse Complement Reverse Complement Forward 6 11 0.0800609 Consensus sequence (original motif): AMTGTGACACCACAGT Consensus sequence (reverse complement motif): ACTGTGGTGTCACART Alignment: ACTGTGGTGTCACART -----GAGGTCAGAAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Original Motif Reverse Complement Forward 2 11 0.0877439 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA -CTTCTGACCTC--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 18 Motif name: Motif 18 Consensus sequence (original motif): CAAAGTCCAGC Consensus sequence (reverse complement motif): GCTGGACTTTG ************************************************************************ Best Matches for Motif ID 18 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 60 NR1H2RXRA Original Motif Original Motif Forward 7 11 0.0763636 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC ------CAAAGTCCAGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 70 CagTGCTCCACTGTGgT Original Motif Reverse Complement Forward 3 11 0.0780303 Consensus sequence (original motif): CAGTGCTCCACTGTGBT Consensus sequence (reverse complement motif): ABCACAGTGGAGCACTG Alignment: ABCACAGTGGAGCACTG --CAAAGTCCAGC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 76 CAcCACAGTGGAGCAct Reverse Complement Reverse Complement Backward 4 11 0.0795455 Consensus sequence (original motif): CAHCACAGTGGAGCACT Consensus sequence (reverse complement motif): AGTGCTCCACTGTGDTG Alignment: AGTGCTCCACTGTGDTG ---GCTGGACTTTG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 AgTGCTCCACTGTGgTGTCACAgT Original Motif Reverse Complement Forward 11 11 0.0797055 Consensus sequence (original motif): AGTGCTCCACTGTGGTGTCACAGT Consensus sequence (reverse complement motif): ACTGTGACACCACAGTGGAGCACT Alignment: ACTGTGACACCACAGTGGAGCACT ----------CAAAGTCCAGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Reverse Complement Reverse Complement Backward 12 11 0.0894661 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: AGTGSWSCACTGTGAMAMCACAGTG ---GCTGGACTTTG----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Original Motif Reverse Complement Backward 2 11 0.10258 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: CCACTGTGVTGTCACAGTGCTCCA ------------CAAAGTCCAGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 TgTGgTGTCACAGTGCTCC Original Motif Original Motif Forward 9 11 0.107008 Consensus sequence (original motif): TGTGGTGTCACAGTGCTCC Consensus sequence (reverse complement motif): GGAGCACTGTGACACCACA Alignment: TGTGGTGTCACAGTGCTCC --------CAAAGTCCAGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Original Motif Original Motif Backward 4 11 0.110715 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC -------CAAAGTCCAGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 15 Motif 15 Original Motif Original Motif Forward 1 11 0.113636 Consensus sequence (original motif): AAAGRTMAAACTA Consensus sequence (reverse complement motif): TAGTTTYAKCTTT Alignment: AAAGRTMAAACTA CAAAGTCCAGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 4 Motif 4 Original Motif Original Motif Backward 4 11 0.120455 Consensus sequence (original motif): HAAAAHAAARMAAA Consensus sequence (reverse complement motif): TTTRKTTTHTTTTH Alignment: HAAAAHAAARMAAA CAAAGTCCAGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 19 Motif name: Motif 19 Consensus sequence (original motif): AGAGAAAG Consensus sequence (reverse complement motif): CTTTCTCT ************************************************************************ Best Matches for Motif ID 19 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 43 Motif 43 Reverse Complement Reverse Complement Backward 1 8 0.046875 Consensus sequence (original motif): AAKGAAAGGCA Consensus sequence (reverse complement motif): TGCCTTTCYTT Alignment: TGCCTTTCYTT ---CTTTCTCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 21 Motif 21 Reverse Complement Original Motif Forward 4 8 0.078125 Consensus sequence (original motif): CTGCTTTCCMAA Consensus sequence (reverse complement motif): TTYGGAAAGCAG Alignment: CTGCTTTCCMAA ---CTTTCTCT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 44 Motif 44 Reverse Complement Reverse Complement Forward 3 8 0.078125 Consensus sequence (original motif): AATGKAAGAA Consensus sequence (reverse complement motif): TTCTTYCATT Alignment: TTCTTYCATT --CTTTCTCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 16 Motif 16 Original Motif Reverse Complement Backward 4 8 0.078125 Consensus sequence (original motif): TCTKTGTCAAWA Consensus sequence (reverse complement motif): TWTTGACAYAGA Alignment: TWTTGACAYAGA -AGAGAAAG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 15 Motif 15 Original Motif Original Motif Forward 3 8 0.09375 Consensus sequence (original motif): AAAGRTMAAACTA Consensus sequence (reverse complement motif): TAGTTTYAKCTTT Alignment: AAAGRTMAAACTA --AGAGAAAG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 49 Motif 49 Original Motif Original Motif Backward 7 8 0.09375 Consensus sequence (original motif): AAAAAAAAAAAAAT Consensus sequence (reverse complement motif): ATTTTTTTTTTTTT Alignment: AAAAAAAAAAAAAT AGAGAAAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 41 Motif 41 Reverse Complement Reverse Complement Backward 2 8 0.09375 Consensus sequence (original motif): TGGAGGAAA Consensus sequence (reverse complement motif): TTTCCTCCA Alignment: TTTCCTCCA CTTTCTCT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 94 TFM13 Original Motif Reverse Complement Forward 10 8 0.0959821 Consensus sequence (original motif): TTTTTTTKTTKTTTAATTHW Consensus sequence (reverse complement motif): WHAATTAAARAARAAAAAAA Alignment: WHAATTAAARAARAAAAAAA ---------AGAGAAAG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 60 NR1H2RXRA Original Motif Original Motif Backward 7 8 0.09625 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC ---AGAGAAAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 4 Motif 4 Original Motif Original Motif Backward 5 8 0.101562 Consensus sequence (original motif): HAAAAHAAARMAAA Consensus sequence (reverse complement motif): TTTRKTTTHTTTTH Alignment: HAAAAHAAARMAAA --AGAGAAAG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 20 Motif name: Motif 20 Consensus sequence (original motif): TCCTCCTGGAA Consensus sequence (reverse complement motif): TTCCAGGAGGA ************************************************************************ Best Matches for Motif ID 20 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 66 CTCF Original Motif Reverse Complement Forward 8 11 0.102062 Consensus sequence (original motif): YDRCCASYAGRKGGCRSYV Consensus sequence (reverse complement motif): BMSMGCCYMCTKSTGGMHM Alignment: BMSMGCCYMCTKSTGGMHM -------TCCTCCTGGAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 47 Motif 47 Original Motif Original Motif Forward 2 11 0.121753 Consensus sequence (original motif): YGCCACCTDSTGGY Consensus sequence (reverse complement motif): KCCASDAGGTGGCK Alignment: YGCCACCTDSTGGY -TCCTCCTGGAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 21 Motif 21 Reverse Complement Reverse Complement Forward 1 11 0.125 Consensus sequence (original motif): CTGCTTTCCMAA Consensus sequence (reverse complement motif): TTYGGAAAGCAG Alignment: TTYGGAAAGCAG TTCCAGGAGGA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 23 Motif 23 Reverse Complement Reverse Complement Forward 1 11 0.125 Consensus sequence (original motif): ATGTWTTCATTMAT Consensus sequence (reverse complement motif): ATYAATGAAWACAT Alignment: ATYAATGAAWACAT TTCCAGGAGGA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 56 Mycn Original Motif Reverse Complement Forward 1 10 0.612329 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: GCCACGTGSD- TCCTCCTGGAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 27 Motif 27 Reverse Complement Original Motif Forward 2 10 0.6125 Consensus sequence (original motif): ATTCTGTRAAG Consensus sequence (reverse complement motif): CTTKACAGAAT Alignment: ATTCTGTRAAG- -TTCCAGGAGGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 58 Myc Original Motif Reverse Complement Forward 1 10 0.615419 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: DCCACGTGCV- TCCTCCTGGAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Reverse Complement Original Motif Backward 12 10 0.62065 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: -TTCAGCACCATGGACAGCKCC TTCCAGGAGGA----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 30 Motif 30 Original Motif Original Motif Forward 2 10 0.625 Consensus sequence (original motif): TTGCTGCTTTT Consensus sequence (reverse complement motif): AAAAGCAGCAA Alignment: TTGCTGCTTTT- -TCCTCCTGGAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 22 Motif 22 Original Motif Reverse Complement Forward 5 10 0.625 Consensus sequence (original motif): TTTATGGTGAGCAT Consensus sequence (reverse complement motif): ATGCTCACCATAAA Alignment: ATGCTCACCATAAA- ----TCCTCCTGGAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 21 Motif name: Motif 21 Consensus sequence (original motif): CTGCTTTCCMAA Consensus sequence (reverse complement motif): TTYGGAAAGCAG ************************************************************************ Best Matches for Motif ID 21 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 22 Motif 22 Original Motif Reverse Complement Backward 3 12 0.075 Consensus sequence (original motif): TTTATGGTGAGCAT Consensus sequence (reverse complement motif): ATGCTCACCATAAA Alignment: ATGCTCACCATAAA CTGCTTTCCMAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 91 TFM3 Reverse Complement Reverse Complement Backward 6 12 0.0854167 Consensus sequence (original motif): KTTTTTTKTTTTTTDAAB Consensus sequence (reverse complement motif): BTTHAAAAAAYAAAAAAR Alignment: BTTHAAAAAAYAAAAAAR -TTYGGAAAGCAG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Original Motif Reverse Complement Backward 9 12 0.0868982 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA -CTGCTTTCCMAA-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 71 AmTGTGACACCACAGT Original Motif Reverse Complement Forward 4 12 0.0938802 Consensus sequence (original motif): AMTGTGACACCACAGT Consensus sequence (reverse complement motif): ACTGTGGTGTCACART Alignment: ACTGTGGTGTCACART ---CTGCTTTCCMAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 AgTGCTCCACTGTGgTGTCACAgT Original Motif Original Motif Forward 12 12 0.0952465 Consensus sequence (original motif): AGTGCTCCACTGTGGTGTCACAGT Consensus sequence (reverse complement motif): ACTGTGACACCACAGTGGAGCACT Alignment: AGTGCTCCACTGTGGTGTCACAGT -----------CTGCTTTCCMAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Original Motif Reverse Complement Forward 6 12 0.0978041 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: CCACTGTGVTGTCACAGTGCTCCA -----CTGCTTTCCMAA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 TgTGgTGTCACAGTGCTCC Original Motif Original Motif Forward 2 12 0.100752 Consensus sequence (original motif): TGTGGTGTCACAGTGCTCC Consensus sequence (reverse complement motif): GGAGCACTGTGACACCACA Alignment: TGTGGTGTCACAGTGCTCC -CTGCTTTCCMAA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 23 Motif 23 Original Motif Original Motif Forward 1 12 0.10625 Consensus sequence (original motif): ATGTWTTCATTMAT Consensus sequence (reverse complement motif): ATYAATGAAWACAT Alignment: ATGTWTTCATTMAT CTGCTTTCCMAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 46 Motif 46 Original Motif Reverse Complement Forward 2 12 0.10625 Consensus sequence (original motif): ATAGGTTTAGYATA Consensus sequence (reverse complement motif): TATKCTAAACCTAT Alignment: TATKCTAAACCTAT -CTGCTTTCCMAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 43 Motif 43 Reverse Complement Original Motif Forward 1 11 0.583523 Consensus sequence (original motif): AAKGAAAGGCA Consensus sequence (reverse complement motif): TGCCTTTCYTT Alignment: AAKGAAAGGCA- TTYGGAAAGCAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 22 Motif name: Motif 22 Consensus sequence (original motif): TTTATGGTGAGCAT Consensus sequence (reverse complement motif): ATGCTCACCATAAA ************************************************************************ Best Matches for Motif ID 22 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 23 Motif 23 Original Motif Reverse Complement Backward 1 14 0.125 Consensus sequence (original motif): ATGTWTTCATTMAT Consensus sequence (reverse complement motif): ATYAATGAAWACAT Alignment: ATYAATGAAWACAT TTTATGGTGAGCAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 46 Motif 46 Reverse Complement Reverse Complement Forward 2 13 0.586538 Consensus sequence (original motif): ATAGGTTTAGYATA Consensus sequence (reverse complement motif): TATKCTAAACCTAT Alignment: TATKCTAAACCTAT- -ATGCTCACCATAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 33 Motif 33 Original Motif Original Motif Forward 2 13 0.625 Consensus sequence (original motif): TTTAATGTYTTTWA Consensus sequence (reverse complement motif): TWAAAKACATTAAA Alignment: TTTAATGTYTTTWA- -TTTATGGTGAGCAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 21 Motif 21 Reverse Complement Original Motif Backward 1 12 1.09375 Consensus sequence (original motif): CTGCTTTCCMAA Consensus sequence (reverse complement motif): TTYGGAAAGCAG Alignment: --CTGCTTTCCMAA ATGCTCACCATAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 60 NR1H2RXRA Original Motif Original Motif Forward 6 12 1.11167 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC-- -----TTTATGGTGAGCAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 15 Motif 15 Original Motif Reverse Complement Forward 2 12 1.11458 Consensus sequence (original motif): AAAGRTMAAACTA Consensus sequence (reverse complement motif): TAGTTTYAKCTTT Alignment: TAGTTTYAKCTTT-- -TTTATGGTGAGCAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 31 Motif 31 Original Motif Original Motif Backward 1 11 1.61364 Consensus sequence (original motif): TTGTTGATTTT Consensus sequence (reverse complement motif): AAAATCAACAA Alignment: ---TTGTTGATTTT TTTATGGTGAGCAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 27 Motif 27 Reverse Complement Reverse Complement Backward 1 11 1.61364 Consensus sequence (original motif): ATTCTGTRAAG Consensus sequence (reverse complement motif): CTTKACAGAAT Alignment: ---CTTKACAGAAT ATGCTCACCATAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 17 Motif 17 Reverse Complement Original Motif Backward 1 11 1.61364 Consensus sequence (original motif): CTTCTGACCTC Consensus sequence (reverse complement motif): GAGGTCAGAAG Alignment: ---CTTCTGACCTC ATGCTCACCATAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 24 Motif 24 Original Motif Reverse Complement Forward 1 11 1.625 Consensus sequence (original motif): AAAGWCATWAA Consensus sequence (reverse complement motif): TTWATGWCTTT Alignment: TTWATGWCTTT--- TTTATGGTGAGCAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 23 Motif name: Motif 23 Consensus sequence (original motif): ATGTWTTCATTMAT Consensus sequence (reverse complement motif): ATYAATGAAWACAT ************************************************************************ Best Matches for Motif ID 23 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 49 Motif 49 Original Motif Reverse Complement Backward 1 14 0.0825893 Consensus sequence (original motif): AAAAAAAAAAAAAT Consensus sequence (reverse complement motif): ATTTTTTTTTTTTT Alignment: ATTTTTTTTTTTTT ATGTWTTCATTMAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 94 TFM13 Reverse Complement Reverse Complement Forward 4 14 0.0876913 Consensus sequence (original motif): TTTTTTTKTTKTTTAATTHW Consensus sequence (reverse complement motif): WHAATTAAARAARAAAAAAA Alignment: WHAATTAAARAARAAAAAAA ---ATYAATGAAWACAT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 91 TFM3 Reverse Complement Reverse Complement Backward 4 14 0.0959821 Consensus sequence (original motif): KTTTTTTKTTTTTTDAAB Consensus sequence (reverse complement motif): BTTHAAAAAAYAAAAAAR Alignment: BTTHAAAAAAYAAAAAAR -ATYAATGAAWACAT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 33 Motif 33 Original Motif Reverse Complement Forward 1 14 0.109375 Consensus sequence (original motif): TTTAATGTYTTTWA Consensus sequence (reverse complement motif): TWAAAKACATTAAA Alignment: TWAAAKACATTAAA ATGTWTTCATTMAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 22 Motif 22 Original Motif Reverse Complement Backward 1 14 0.109375 Consensus sequence (original motif): TTTATGGTGAGCAT Consensus sequence (reverse complement motif): ATGCTCACCATAAA Alignment: ATGCTCACCATAAA ATGTWTTCATTMAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 45 Motif 45 Original Motif Original Motif Forward 2 13 0.590144 Consensus sequence (original motif): TAASTCTWTTTTAA Consensus sequence (reverse complement motif): TTAAAAWAGASTTA Alignment: TAASTCTWTTTTAA- -ATGTWTTCATTMAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 4 Motif 4 Reverse Complement Original Motif Forward 2 13 0.601683 Consensus sequence (original motif): HAAAAHAAARMAAA Consensus sequence (reverse complement motif): TTTRKTTTHTTTTH Alignment: HAAAAHAAARMAAA- -ATYAATGAAWACAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 15 Motif 15 Reverse Complement Original Motif Backward 1 13 0.609375 Consensus sequence (original motif): AAAGRTMAAACTA Consensus sequence (reverse complement motif): TAGTTTYAKCTTT Alignment: -AAAGRTMAAACTA ATYAATGAAWACAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 46 Motif 46 Reverse Complement Reverse Complement Backward 3 12 1.09896 Consensus sequence (original motif): ATAGGTTTAGYATA Consensus sequence (reverse complement motif): TATKCTAAACCTAT Alignment: --TATKCTAAACCTAT ATYAATGAAWACAT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 21 Motif 21 Original Motif Original Motif Forward 1 12 1.10938 Consensus sequence (original motif): CTGCTTTCCMAA Consensus sequence (reverse complement motif): TTYGGAAAGCAG Alignment: CTGCTTTCCMAA-- ATGTWTTCATTMAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 24 Motif name: Motif 24 Consensus sequence (original motif): AAAGWCATWAA Consensus sequence (reverse complement motif): TTWATGWCTTT ************************************************************************ Best Matches for Motif ID 24 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 33 Motif 33 Original Motif Reverse Complement Backward 2 11 0.0340909 Consensus sequence (original motif): TTTAATGTYTTTWA Consensus sequence (reverse complement motif): TWAAAKACATTAAA Alignment: TWAAAKACATTAAA --AAAGWCATWAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 31 Motif 31 Original Motif Reverse Complement Forward 1 11 0.0795455 Consensus sequence (original motif): TTGTTGATTTT Consensus sequence (reverse complement motif): AAAATCAACAA Alignment: AAAATCAACAA AAAGWCATWAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 49 Motif 49 Original Motif Original Motif Forward 1 11 0.0909091 Consensus sequence (original motif): AAAAAAAAAAAAAT Consensus sequence (reverse complement motif): ATTTTTTTTTTTTT Alignment: AAAAAAAAAAAAAT AAAGWCATWAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 30 Motif 30 Original Motif Reverse Complement Backward 1 11 0.0909091 Consensus sequence (original motif): TTGCTGCTTTT Consensus sequence (reverse complement motif): AAAAGCAGCAA Alignment: AAAAGCAGCAA AAAGWCATWAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 13 Motif 13 Original Motif Reverse Complement Backward 1 11 0.0909091 Consensus sequence (original motif): AAWATRTATTT Consensus sequence (reverse complement motif): AAATAKATWTT Alignment: AAATAKATWTT AAAGWCATWAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 91 TFM3 Reverse Complement Original Motif Backward 6 11 0.0951705 Consensus sequence (original motif): KTTTTTTKTTTTTTDAAB Consensus sequence (reverse complement motif): BTTHAAAAAAYAAAAAAR Alignment: KTTTTTTKTTTTTTDAAB --TTWATGWCTTT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 4 Motif 4 Reverse Complement Reverse Complement Forward 2 11 0.0977273 Consensus sequence (original motif): HAAAAHAAARMAAA Consensus sequence (reverse complement motif): TTTRKTTTHTTTTH Alignment: TTTRKTTTHTTTTH -TTWATGWCTTT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 94 TFM13 Reverse Complement Original Motif Backward 9 11 0.099026 Consensus sequence (original motif): TTTTTTTKTTKTTTAATTHW Consensus sequence (reverse complement motif): WHAATTAAARAARAAAAAAA Alignment: TTTTTTTKTTKTTTAATTHW -TTWATGWCTTT-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 15 Motif 15 Reverse Complement Reverse Complement Backward 1 11 0.102273 Consensus sequence (original motif): AAAGRTMAAACTA Consensus sequence (reverse complement motif): TAGTTTYAKCTTT Alignment: TAGTTTYAKCTTT --TTWATGWCTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 89 TFM1 Original Motif Original Motif Backward 5 11 0.112013 Consensus sequence (original motif): CACACACACACWCACACA Consensus sequence (reverse complement motif): TGTGTGWGTGTGTGTGTG Alignment: CACACACACACWCACACA ---AAAGWCATWAA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 25 Motif name: Motif 25 Consensus sequence (original motif): AATAACAGATT Consensus sequence (reverse complement motif): AATCTGTTATT ************************************************************************ Best Matches for Motif ID 25 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 7 Motif 7 Original Motif Reverse Complement Backward 1 11 0.0482955 Consensus sequence (original motif): AAAATKCTATT Consensus sequence (reverse complement motif): AATAGYATTTT Alignment: AATAGYATTTT AATAACAGATT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 49 Motif 49 Reverse Complement Reverse Complement Backward 4 11 0.0596591 Consensus sequence (original motif): AAAAAAAAAAAAAT Consensus sequence (reverse complement motif): ATTTTTTTTTTTTT Alignment: ATTTTTTTTTTTTT AATCTGTTATT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 13 Motif 13 Original Motif Reverse Complement Forward 1 11 0.0596591 Consensus sequence (original motif): AAWATRTATTT Consensus sequence (reverse complement motif): AAATAKATWTT Alignment: AAATAKATWTT AATAACAGATT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 45 Motif 45 Reverse Complement Original Motif Forward 3 11 0.0596591 Consensus sequence (original motif): TAASTCTWTTTTAA Consensus sequence (reverse complement motif): TTAAAAWAGASTTA Alignment: TAASTCTWTTTTAA --AATCTGTTATT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 27 Motif 27 Original Motif Reverse Complement Backward 1 11 0.0596591 Consensus sequence (original motif): ATTCTGTRAAG Consensus sequence (reverse complement motif): CTTKACAGAAT Alignment: CTTKACAGAAT AATAACAGATT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 33 Motif 33 Original Motif Reverse Complement Forward 1 11 0.0710227 Consensus sequence (original motif): TTTAATGTYTTTWA Consensus sequence (reverse complement motif): TWAAAKACATTAAA Alignment: TWAAAKACATTAAA AATAACAGATT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 10 Motif 10 Original Motif Original Motif Backward 1 11 0.0710227 Consensus sequence (original motif): AAAMATTGTTT Consensus sequence (reverse complement motif): AAACAATYTTT Alignment: AAAMATTGTTT AATAACAGATT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 AgTGCTCCACTGTGgTGTCACAgT Reverse Complement Original Motif Backward 6 11 0.0798255 Consensus sequence (original motif): AGTGCTCCACTGTGGTGTCACAGT Consensus sequence (reverse complement motif): ACTGTGACACCACAGTGGAGCACT Alignment: AGTGCTCCACTGTGGTGTCACAGT --------AATCTGTTATT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 15 Motif 15 Original Motif Original Motif Forward 2 11 0.0823864 Consensus sequence (original motif): AAAGRTMAAACTA Consensus sequence (reverse complement motif): TAGTTTYAKCTTT Alignment: AAAGRTMAAACTA -AATAACAGATT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 11 Motif 11 Original Motif Reverse Complement Forward 1 11 0.0823864 Consensus sequence (original motif): AAMATGTTTMAA Consensus sequence (reverse complement motif): TTYAAACATYTT Alignment: TTYAAACATYTT AATAACAGATT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 26 Motif name: Motif 26 Consensus sequence (original motif): CTGTTTTWAT Consensus sequence (reverse complement motif): ATWAAAACAG ************************************************************************ Best Matches for Motif ID 26 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 23 Motif 23 Original Motif Original Motif Backward 5 10 0.0625 Consensus sequence (original motif): ATGTWTTCATTMAT Consensus sequence (reverse complement motif): ATYAATGAAWACAT Alignment: ATGTWTTCATTMAT CTGTTTTWAT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 94 TFM13 Reverse Complement Reverse Complement Backward 8 10 0.0821429 Consensus sequence (original motif): TTTTTTTKTTKTTTAATTHW Consensus sequence (reverse complement motif): WHAATTAAARAARAAAAAAA Alignment: WHAATTAAARAARAAAAAAA ---ATWAAAACAG------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 49 Motif 49 Original Motif Reverse Complement Forward 4 10 0.0875 Consensus sequence (original motif): AAAAAAAAAAAAAT Consensus sequence (reverse complement motif): ATTTTTTTTTTTTT Alignment: ATTTTTTTTTTTTT ---CTGTTTTWAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 33 Motif 33 Original Motif Original Motif Backward 1 10 0.0875 Consensus sequence (original motif): TTTAATGTYTTTWA Consensus sequence (reverse complement motif): TWAAAKACATTAAA Alignment: TTTAATGTYTTTWA ----CTGTTTTWAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 16 Motif 16 Original Motif Original Motif Forward 2 10 0.0875 Consensus sequence (original motif): TCTKTGTCAAWA Consensus sequence (reverse complement motif): TWTTGACAYAGA Alignment: TCTKTGTCAAWA -CTGTTTTWAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 4 Motif 4 Original Motif Reverse Complement Backward 2 10 0.09 Consensus sequence (original motif): HAAAAHAAARMAAA Consensus sequence (reverse complement motif): TTTRKTTTHTTTTH Alignment: TTTRKTTTHTTTTH ---CTGTTTTWAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 91 TFM3 Original Motif Original Motif Backward 4 10 0.096875 Consensus sequence (original motif): KTTTTTTKTTTTTTDAAB Consensus sequence (reverse complement motif): BTTHAAAAAAYAAAAAAR Alignment: KTTTTTTKTTTTTTDAAB -----CTGTTTTWAT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 21 Motif 21 Original Motif Original Motif Backward 3 10 0.1 Consensus sequence (original motif): CTGCTTTCCMAA Consensus sequence (reverse complement motif): TTYGGAAAGCAG Alignment: CTGCTTTCCMAA CTGTTTTWAT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 45 Motif 45 Reverse Complement Reverse Complement Forward 2 10 0.1125 Consensus sequence (original motif): TAASTCTWTTTTAA Consensus sequence (reverse complement motif): TTAAAAWAGASTTA Alignment: TTAAAAWAGASTTA -ATWAAAACAG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 25 Motif 25 Original Motif Reverse Complement Forward 1 10 0.1125 Consensus sequence (original motif): AATAACAGATT Consensus sequence (reverse complement motif): AATCTGTTATT Alignment: AATCTGTTATT CTGTTTTWAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 27 Motif name: Motif 27 Consensus sequence (original motif): ATTCTGTRAAG Consensus sequence (reverse complement motif): CTTKACAGAAT ************************************************************************ Best Matches for Motif ID 27 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 25 Motif 25 Original Motif Reverse Complement Forward 1 11 0.0596591 Consensus sequence (original motif): AATAACAGATT Consensus sequence (reverse complement motif): AATCTGTTATT Alignment: AATCTGTTATT ATTCTGTRAAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 91 TFM3 Original Motif Original Motif Backward 1 11 0.0696023 Consensus sequence (original motif): KTTTTTTKTTTTTTDAAB Consensus sequence (reverse complement motif): BTTHAAAAAAYAAAAAAR Alignment: KTTTTTTKTTTTTTDAAB -------ATTCTGTRAAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 16 Motif 16 Reverse Complement Reverse Complement Backward 1 11 0.0710227 Consensus sequence (original motif): TCTKTGTCAAWA Consensus sequence (reverse complement motif): TWTTGACAYAGA Alignment: TWTTGACAYAGA -CTTKACAGAAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 81 ctatacggacg Original Motif Reverse Complement Forward 1 11 0.0710227 Consensus sequence (original motif): CTATACGGACG Consensus sequence (reverse complement motif): CGTCCGTATAG Alignment: CGTCCGTATAG ATTCTGTRAAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 94 TFM13 Original Motif Original Motif Backward 3 11 0.080763 Consensus sequence (original motif): TTTTTTTKTTKTTTAATTHW Consensus sequence (reverse complement motif): WHAATTAAARAARAAAAAAA Alignment: TTTTTTTKTTKTTTAATTHW -------ATTCTGTRAAG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 22 Motif 22 Original Motif Original Motif Forward 1 11 0.0823864 Consensus sequence (original motif): TTTATGGTGAGCAT Consensus sequence (reverse complement motif): ATGCTCACCATAAA Alignment: TTTATGGTGAGCAT ATTCTGTRAAG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 71 AmTGTGACACCACAGT Reverse Complement Original Motif Forward 3 11 0.0901989 Consensus sequence (original motif): AMTGTGACACCACAGT Consensus sequence (reverse complement motif): ACTGTGGTGTCACART Alignment: AMTGTGACACCACAGT --CTTKACAGAAT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 70 CagTGCTCCACTGTGgT Original Motif Reverse Complement Backward 6 11 0.0910985 Consensus sequence (original motif): CAGTGCTCCACTGTGBT Consensus sequence (reverse complement motif): ABCACAGTGGAGCACTG Alignment: ABCACAGTGGAGCACTG -ATTCTGTRAAG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 AgTGCTCCACTGTGgTGTCACAgT Reverse Complement Reverse Complement Backward 12 11 0.0921495 Consensus sequence (original motif): AGTGCTCCACTGTGGTGTCACAGT Consensus sequence (reverse complement motif): ACTGTGACACCACAGTGGAGCACT Alignment: ACTGTGACACCACAGTGGAGCACT --CTTKACAGAAT----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Reverse Complement Original Motif Forward 9 11 0.0925215 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: TGGAGCACTGTGACAVCACAGTGG --------CTTKACAGAAT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 28 Motif name: Motif 28 Consensus sequence (original motif): ATTTAGTAAA Consensus sequence (reverse complement motif): TTTACTAAAT ************************************************************************ Best Matches for Motif ID 28 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 27 Motif 27 Reverse Complement Reverse Complement Backward 1 10 0.0625 Consensus sequence (original motif): ATTCTGTRAAG Consensus sequence (reverse complement motif): CTTKACAGAAT Alignment: CTTKACAGAAT -TTTACTAAAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 46 Motif 46 Original Motif Original Motif Forward 5 10 0.0625 Consensus sequence (original motif): ATAGGTTTAGYATA Consensus sequence (reverse complement motif): TATKCTAAACCTAT Alignment: ATAGGTTTAGYATA ----ATTTAGTAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 33 Motif 33 Original Motif Reverse Complement Forward 5 10 0.0875 Consensus sequence (original motif): TTTAATGTYTTTWA Consensus sequence (reverse complement motif): TWAAAKACATTAAA Alignment: TWAAAKACATTAAA ----ATTTAGTAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 91 TFM3 Reverse Complement Reverse Complement Backward 8 10 0.09375 Consensus sequence (original motif): KTTTTTTKTTTTTTDAAB Consensus sequence (reverse complement motif): BTTHAAAAAAYAAAAAAR Alignment: BTTHAAAAAAYAAAAAAR -TTTACTAAAT------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 23 Motif 23 Reverse Complement Original Motif Forward 1 10 0.1 Consensus sequence (original motif): ATGTWTTCATTMAT Consensus sequence (reverse complement motif): ATYAATGAAWACAT Alignment: ATGTWTTCATTMAT TTTACTAAAT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 29 Motif 29 Original Motif Original Motif Forward 1 10 0.1 Consensus sequence (original motif): ATTTATTGCTA Consensus sequence (reverse complement motif): TAGCAATAAAT Alignment: ATTTATTGCTA ATTTAGTAAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 94 TFM13 Original Motif Reverse Complement Forward 3 10 0.105357 Consensus sequence (original motif): TTTTTTTKTTKTTTAATTHW Consensus sequence (reverse complement motif): WHAATTAAARAARAAAAAAA Alignment: WHAATTAAARAARAAAAAAA --ATTTAGTAAA-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 16 Motif 16 Original Motif Original Motif Backward 3 10 0.1125 Consensus sequence (original motif): TCTKTGTCAAWA Consensus sequence (reverse complement motif): TWTTGACAYAGA Alignment: TCTKTGTCAAWA ATTTAGTAAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 14 Motif 14 Original Motif Original Motif Forward 2 10 0.1125 Consensus sequence (original motif): TAATKATATAA Consensus sequence (reverse complement motif): TTATATYATTA Alignment: TAATKATATAA -ATTTAGTAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 4 Motif 4 Reverse Complement Reverse Complement Backward 5 10 0.115 Consensus sequence (original motif): HAAAAHAAARMAAA Consensus sequence (reverse complement motif): TTTRKTTTHTTTTH Alignment: TTTRKTTTHTTTTH TTTACTAAAT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 29 Motif name: Motif 29 Consensus sequence (original motif): ATTTATTGCTA Consensus sequence (reverse complement motif): TAGCAATAAAT ************************************************************************ Best Matches for Motif ID 29 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 49 Motif 49 Reverse Complement Original Motif Backward 1 11 0.0909091 Consensus sequence (original motif): AAAAAAAAAAAAAT Consensus sequence (reverse complement motif): ATTTTTTTTTTTTT Alignment: AAAAAAAAAAAAAT ---TAGCAATAAAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 23 Motif 23 Original Motif Original Motif Forward 1 11 0.102273 Consensus sequence (original motif): ATGTWTTCATTMAT Consensus sequence (reverse complement motif): ATYAATGAAWACAT Alignment: ATGTWTTCATTMAT ATTTATTGCTA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 14 Motif 14 Reverse Complement Original Motif Backward 1 11 0.102273 Consensus sequence (original motif): TAATKATATAA Consensus sequence (reverse complement motif): TTATATYATTA Alignment: TAATKATATAA TAGCAATAAAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 15 Motif 15 Reverse Complement Original Motif Forward 2 11 0.113636 Consensus sequence (original motif): AAAGRTMAAACTA Consensus sequence (reverse complement motif): TAGTTTYAKCTTT Alignment: AAAGRTMAAACTA -TAGCAATAAAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 9 Motif 9 Reverse Complement Reverse Complement Backward 2 11 0.113636 Consensus sequence (original motif): AACATATTTTCA Consensus sequence (reverse complement motif): TGAAAATATGTT Alignment: TGAAAATATGTT TAGCAATAAAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 10 Motif 10 Original Motif Original Motif Backward 1 11 0.113636 Consensus sequence (original motif): AAAMATTGTTT Consensus sequence (reverse complement motif): AAACAATYTTT Alignment: AAAMATTGTTT ATTTATTGCTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 94 TFM13 Original Motif Original Motif Backward 7 11 0.113636 Consensus sequence (original motif): TTTTTTTKTTKTTTAATTHW Consensus sequence (reverse complement motif): WHAATTAAARAARAAAAAAA Alignment: TTTTTTTKTTKTTTAATTHW ---ATTTATTGCTA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 91 TFM3 Reverse Complement Reverse Complement Backward 1 11 0.120739 Consensus sequence (original motif): KTTTTTTKTTTTTTDAAB Consensus sequence (reverse complement motif): BTTHAAAAAAYAAAAAAR Alignment: BTTHAAAAAAYAAAAAAR -------TAGCAATAAAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 33 Motif 33 Original Motif Original Motif Forward 1 11 0.125 Consensus sequence (original motif): TTTAATGTYTTTWA Consensus sequence (reverse complement motif): TWAAAKACATTAAA Alignment: TTTAATGTYTTTWA ATTTATTGCTA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 45 Motif 45 Reverse Complement Reverse Complement Backward 4 11 0.125 Consensus sequence (original motif): TAASTCTWTTTTAA Consensus sequence (reverse complement motif): TTAAAAWAGASTTA Alignment: TTAAAAWAGASTTA TAGCAATAAAT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 30 Motif name: Motif 30 Consensus sequence (original motif): TTGCTGCTTTT Consensus sequence (reverse complement motif): AAAAGCAGCAA ************************************************************************ Best Matches for Motif ID 30 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 31 Motif 31 Original Motif Original Motif Forward 1 11 0.0142045 Consensus sequence (original motif): TTGTTGATTTT Consensus sequence (reverse complement motif): AAAATCAACAA Alignment: TTGTTGATTTT TTGCTGCTTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 33 Motif 33 Original Motif Original Motif Forward 2 11 0.0482955 Consensus sequence (original motif): TTTAATGTYTTTWA Consensus sequence (reverse complement motif): TWAAAKACATTAAA Alignment: TTTAATGTYTTTWA -TTGCTGCTTTT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 4 Motif 4 Original Motif Reverse Complement Backward 2 11 0.0573864 Consensus sequence (original motif): HAAAAHAAARMAAA Consensus sequence (reverse complement motif): TTTRKTTTHTTTTH Alignment: TTTRKTTTHTTTTH --TTGCTGCTTTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 24 Motif 24 Original Motif Reverse Complement Forward 1 11 0.0596591 Consensus sequence (original motif): AAAGWCATWAA Consensus sequence (reverse complement motif): TTWATGWCTTT Alignment: TTWATGWCTTT TTGCTGCTTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 49 Motif 49 Reverse Complement Original Motif Backward 4 11 0.0596591 Consensus sequence (original motif): AAAAAAAAAAAAAT Consensus sequence (reverse complement motif): ATTTTTTTTTTTTT Alignment: AAAAAAAAAAAAAT AAAAGCAGCAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 91 TFM3 Original Motif Original Motif Backward 6 11 0.0610795 Consensus sequence (original motif): KTTTTTTKTTTTTTDAAB Consensus sequence (reverse complement motif): BTTHAAAAAAYAAAAAAR Alignment: KTTTTTTKTTTTTTDAAB --TTGCTGCTTTT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 94 TFM13 Original Motif Original Motif Forward 2 11 0.0629058 Consensus sequence (original motif): TTTTTTTKTTKTTTAATTHW Consensus sequence (reverse complement motif): WHAATTAAARAARAAAAAAA Alignment: TTTTTTTKTTKTTTAATTHW -TTGCTGCTTTT-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 88 TFF11 Original Motif Original Motif Forward 1 11 0.0756642 Consensus sequence (original motif): CTGCTGBDBBDGBD Consensus sequence (reverse complement motif): HVCDBBDBCAGCAG Alignment: CTGCTGBDBBDGBD TTGCTGCTTTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 25 Motif 25 Original Motif Reverse Complement Backward 1 11 0.0823864 Consensus sequence (original motif): AATAACAGATT Consensus sequence (reverse complement motif): AATCTGTTATT Alignment: AATCTGTTATT TTGCTGCTTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 45 Motif 45 Reverse Complement Reverse Complement Backward 1 11 0.0823864 Consensus sequence (original motif): TAASTCTWTTTTAA Consensus sequence (reverse complement motif): TTAAAAWAGASTTA Alignment: TTAAAAWAGASTTA ---AAAAGCAGCAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 31 Motif name: Motif 31 Consensus sequence (original motif): TTGTTGATTTT Consensus sequence (reverse complement motif): AAAATCAACAA ************************************************************************ Best Matches for Motif ID 31 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 30 Motif 30 Original Motif Original Motif Forward 1 11 0.0454545 Consensus sequence (original motif): TTGCTGCTTTT Consensus sequence (reverse complement motif): AAAAGCAGCAA Alignment: TTGCTGCTTTT TTGTTGATTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 49 Motif 49 Original Motif Reverse Complement Forward 3 11 0.0681818 Consensus sequence (original motif): AAAAAAAAAAAAAT Consensus sequence (reverse complement motif): ATTTTTTTTTTTTT Alignment: ATTTTTTTTTTTTT --TTGTTGATTTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 94 TFM13 Original Motif Original Motif Forward 2 11 0.0746753 Consensus sequence (original motif): TTTTTTTKTTKTTTAATTHW Consensus sequence (reverse complement motif): WHAATTAAARAARAAAAAAA Alignment: TTTTTTTKTTKTTTAATTHW -TTGTTGATTTT-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 33 Motif 33 Original Motif Original Motif Forward 2 11 0.0795455 Consensus sequence (original motif): TTTAATGTYTTTWA Consensus sequence (reverse complement motif): TWAAAKACATTAAA Alignment: TTTAATGTYTTTWA -TTGTTGATTTT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 24 Motif 24 Original Motif Reverse Complement Backward 1 11 0.0795455 Consensus sequence (original motif): AAAGWCATWAA Consensus sequence (reverse complement motif): TTWATGWCTTT Alignment: TTWATGWCTTT TTGTTGATTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 91 TFM3 Original Motif Original Motif Forward 3 11 0.0809659 Consensus sequence (original motif): KTTTTTTKTTTTTTDAAB Consensus sequence (reverse complement motif): BTTHAAAAAAYAAAAAAR Alignment: KTTTTTTKTTTTTTDAAB --TTGTTGATTTT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 4 Motif 4 Original Motif Reverse Complement Backward 2 11 0.0852273 Consensus sequence (original motif): HAAAAHAAARMAAA Consensus sequence (reverse complement motif): TTTRKTTTHTTTTH Alignment: TTTRKTTTHTTTTH --TTGTTGATTTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 13 Motif 13 Reverse Complement Original Motif Backward 1 11 0.113636 Consensus sequence (original motif): AAWATRTATTT Consensus sequence (reverse complement motif): AAATAKATWTT Alignment: AAWATRTATTT AAAATCAACAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 22 Motif 22 Reverse Complement Reverse Complement Forward 1 11 0.113636 Consensus sequence (original motif): TTTATGGTGAGCAT Consensus sequence (reverse complement motif): ATGCTCACCATAAA Alignment: ATGCTCACCATAAA AAAATCAACAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 45 Motif 45 Original Motif Original Motif Forward 2 11 0.113636 Consensus sequence (original motif): TAASTCTWTTTTAA Consensus sequence (reverse complement motif): TTAAAAWAGASTTA Alignment: TAASTCTWTTTTAA -TTGTTGATTTT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 32 Motif name: Motif 32 Consensus sequence (original motif): TTACWGTTT Consensus sequence (reverse complement motif): AAACWGTAA ************************************************************************ Best Matches for Motif ID 32 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 33 Motif 33 Original Motif Original Motif Backward 5 9 0.0347222 Consensus sequence (original motif): TTTAATGTYTTTWA Consensus sequence (reverse complement motif): TWAAAKACATTAAA Alignment: TTTAATGTYTTTWA -TTACWGTTT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 25 Motif 25 Original Motif Original Motif Backward 1 9 0.0486111 Consensus sequence (original motif): AATAACAGATT Consensus sequence (reverse complement motif): AATCTGTTATT Alignment: AATAACAGATT --TTACWGTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 30 Motif 30 Original Motif Original Motif Backward 3 9 0.0486111 Consensus sequence (original motif): TTGCTGCTTTT Consensus sequence (reverse complement motif): AAAAGCAGCAA Alignment: TTGCTGCTTTT TTACWGTTT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 27 Motif 27 Original Motif Reverse Complement Forward 1 9 0.0625 Consensus sequence (original motif): ATTCTGTRAAG Consensus sequence (reverse complement motif): CTTKACAGAAT Alignment: CTTKACAGAAT TTACWGTTT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 91 TFM3 Original Motif Original Motif Forward 3 9 0.0729167 Consensus sequence (original motif): KTTTTTTKTTTTTTDAAB Consensus sequence (reverse complement motif): BTTHAAAAAAYAAAAAAR Alignment: KTTTTTTKTTTTTTDAAB --TTACWGTTT------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 7 Motif 7 Original Motif Reverse Complement Backward 2 9 0.0763889 Consensus sequence (original motif): AAAATKCTATT Consensus sequence (reverse complement motif): AATAGYATTTT Alignment: AATAGYATTTT -TTACWGTTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 13 Motif 13 Original Motif Reverse Complement Forward 1 9 0.0763889 Consensus sequence (original motif): AAWATRTATTT Consensus sequence (reverse complement motif): AAATAKATWTT Alignment: AAATAKATWTT TTACWGTTT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 49 Motif 49 Reverse Complement Original Motif Forward 1 9 0.0763889 Consensus sequence (original motif): AAAAAAAAAAAAAT Consensus sequence (reverse complement motif): ATTTTTTTTTTTTT Alignment: AAAAAAAAAAAAAT AAACWGTAA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 45 Motif 45 Reverse Complement Reverse Complement Backward 1 9 0.0763889 Consensus sequence (original motif): TAASTCTWTTTTAA Consensus sequence (reverse complement motif): TTAAAAWAGASTTA Alignment: TTAAAAWAGASTTA -----AAACWGTAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 24 Motif 24 Original Motif Reverse Complement Forward 3 9 0.0763889 Consensus sequence (original motif): AAAGWCATWAA Consensus sequence (reverse complement motif): TTWATGWCTTT Alignment: TTWATGWCTTT --TTACWGTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 33 Motif name: Motif 33 Consensus sequence (original motif): TTTAATGTYTTTWA Consensus sequence (reverse complement motif): TWAAAKACATTAAA ************************************************************************ Best Matches for Motif ID 33 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 4 Motif 4 Reverse Complement Original Motif Backward 1 14 0.0821429 Consensus sequence (original motif): HAAAAHAAARMAAA Consensus sequence (reverse complement motif): TTTRKTTTHTTTTH Alignment: HAAAAHAAARMAAA TWAAAKACATTAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 94 TFM13 Original Motif Original Motif Forward 2 14 0.0918367 Consensus sequence (original motif): TTTTTTTKTTKTTTAATTHW Consensus sequence (reverse complement motif): WHAATTAAARAARAAAAAAA Alignment: TTTTTTTKTTKTTTAATTHW -TTTAATGTYTTTWA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 91 TFM3 Original Motif Original Motif Backward 4 14 0.09375 Consensus sequence (original motif): KTTTTTTKTTTTTTDAAB Consensus sequence (reverse complement motif): BTTHAAAAAAYAAAAAAR Alignment: KTTTTTTKTTTTTTDAAB -TTTAATGTYTTTWA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 49 Motif 49 Original Motif Reverse Complement Forward 1 14 0.107143 Consensus sequence (original motif): AAAAAAAAAAAAAT Consensus sequence (reverse complement motif): ATTTTTTTTTTTTT Alignment: ATTTTTTTTTTTTT TTTAATGTYTTTWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 23 Motif 23 Original Motif Reverse Complement Forward 1 14 0.125 Consensus sequence (original motif): ATGTWTTCATTMAT Consensus sequence (reverse complement motif): ATYAATGAAWACAT Alignment: ATYAATGAAWACAT TTTAATGTYTTTWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 45 Motif 45 Original Motif Original Motif Backward 2 13 0.576923 Consensus sequence (original motif): TAASTCTWTTTTAA Consensus sequence (reverse complement motif): TTAAAAWAGASTTA Alignment: -TAASTCTWTTTTAA TTTAATGTYTTTWA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 22 Motif 22 Original Motif Original Motif Backward 2 13 0.625 Consensus sequence (original motif): TTTATGGTGAGCAT Consensus sequence (reverse complement motif): ATGCTCACCATAAA Alignment: -TTTATGGTGAGCAT TTTAATGTYTTTWA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 11 Motif 11 Reverse Complement Original Motif Forward 1 12 1.09375 Consensus sequence (original motif): AAMATGTTTMAA Consensus sequence (reverse complement motif): TTYAAACATYTT Alignment: AAMATGTTTMAA-- TWAAAKACATTAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Reverse Complement Reverse Complement Forward 14 12 1.12483 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: AGTGSWSCACTGTGAMAMCACAGTG-- -------------TWAAAKACATTAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 15 Motif 15 Reverse Complement Original Motif Backward 2 12 1.125 Consensus sequence (original motif): AAAGRTMAAACTA Consensus sequence (reverse complement motif): TAGTTTYAKCTTT Alignment: --AAAGRTMAAACTA TWAAAKACATTAAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 34 Motif name: Motif 34 Consensus sequence (original motif): AAAGATGA Consensus sequence (reverse complement motif): TCATCTTT ************************************************************************ Best Matches for Motif ID 34 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 15 Motif 15 Reverse Complement Reverse Complement Forward 6 8 0.03125 Consensus sequence (original motif): AAAGRTMAAACTA Consensus sequence (reverse complement motif): TAGTTTYAKCTTT Alignment: TAGTTTYAKCTTT -----TCATCTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 80 taaacgatgcc Original Motif Original Motif Forward 3 8 0.0625 Consensus sequence (original motif): TAAACGATGCC Consensus sequence (reverse complement motif): GGCATCGTTTA Alignment: TAAACGATGCC --AAAGATGA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 9 Motif 9 Original Motif Reverse Complement Forward 2 8 0.0625 Consensus sequence (original motif): AACATATTTTCA Consensus sequence (reverse complement motif): TGAAAATATGTT Alignment: TGAAAATATGTT -AAAGATGA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 60 NR1H2RXRA Original Motif Original Motif Backward 3 8 0.06375 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC -------AAAGATGA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 52 NR2F1 Original Motif Reverse Complement Forward 7 8 0.0697115 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: AKGYYCAAAGRTCA ------AAAGATGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 45 Motif 45 Reverse Complement Original Motif Backward 3 8 0.078125 Consensus sequence (original motif): TAASTCTWTTTTAA Consensus sequence (reverse complement motif): TTAAAAWAGASTTA Alignment: TAASTCTWTTTTAA ----TCATCTTT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 35 Motif 35 Original Motif Reverse Complement Backward 4 8 0.078125 Consensus sequence (original motif): AGATGYTCTTG Consensus sequence (reverse complement motif): CAAGAKCATCT Alignment: CAAGAKCATCT AAAGATGA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 33 Motif 33 Original Motif Reverse Complement Backward 5 8 0.078125 Consensus sequence (original motif): TTTAATGTYTTTWA Consensus sequence (reverse complement motif): TWAAAKACATTAAA Alignment: TWAAAKACATTAAA --AAAGATGA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 11 Motif 11 Original Motif Reverse Complement Backward 4 8 0.078125 Consensus sequence (original motif): AAMATGTTTMAA Consensus sequence (reverse complement motif): TTYAAACATYTT Alignment: TTYAAACATYTT -AAAGATGA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 10 Motif 10 Reverse Complement Reverse Complement Backward 1 8 0.078125 Consensus sequence (original motif): AAAMATTGTTT Consensus sequence (reverse complement motif): AAACAATYTTT Alignment: AAACAATYTTT ---TCATCTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 35 Motif name: Motif 35 Consensus sequence (original motif): AGATGYTCTTG Consensus sequence (reverse complement motif): CAAGAKCATCT ************************************************************************ Best Matches for Motif ID 35 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 33 Motif 33 Original Motif Original Motif Backward 2 11 0.092803 Consensus sequence (original motif): TTTAATGTYTTTWA Consensus sequence (reverse complement motif): TWAAAKACATTAAA Alignment: TTTAATGTYTTTWA --AGATGYTCTTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Original Motif Reverse Complement Backward 9 11 0.0964903 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA --AGATGYTCTTG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 5 Motif 5 Original Motif Reverse Complement Backward 4 11 0.0999053 Consensus sequence (original motif): CWGAGCCAYCTYTC Consensus sequence (reverse complement motif): GAKAGKTGGCTCWG Alignment: GAKAGKTGGCTCWG AGATGYTCTTG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 88 TFF11 Original Motif Original Motif Forward 2 11 0.101926 Consensus sequence (original motif): CTGCTGBDBBDGBD Consensus sequence (reverse complement motif): HVCDBBDBCAGCAG Alignment: CTGCTGBDBBDGBD -AGATGYTCTTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 15 Motif 15 Original Motif Reverse Complement Forward 1 11 0.104167 Consensus sequence (original motif): AAAGRTMAAACTA Consensus sequence (reverse complement motif): TAGTTTYAKCTTT Alignment: TAGTTTYAKCTTT AGATGYTCTTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 9 Motif 9 Original Motif Original Motif Backward 1 11 0.104167 Consensus sequence (original motif): AACATATTTTCA Consensus sequence (reverse complement motif): TGAAAATATGTT Alignment: AACATATTTTCA -AGATGYTCTTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 49 Motif 49 Original Motif Reverse Complement Backward 4 11 0.104167 Consensus sequence (original motif): AAAAAAAAAAAAAT Consensus sequence (reverse complement motif): ATTTTTTTTTTTTT Alignment: ATTTTTTTTTTTTT AGATGYTCTTG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 13 Motif 13 Reverse Complement Reverse Complement Forward 1 11 0.104167 Consensus sequence (original motif): AAWATRTATTT Consensus sequence (reverse complement motif): AAATAKATWTT Alignment: AAATAKATWTT CAAGAKCATCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 23 Motif 23 Original Motif Original Motif Backward 4 11 0.104167 Consensus sequence (original motif): ATGTWTTCATTMAT Consensus sequence (reverse complement motif): ATYAATGAAWACAT Alignment: ATGTWTTCATTMAT AGATGYTCTTG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 12 Motif 12 Reverse Complement Original Motif Forward 1 11 0.104167 Consensus sequence (original motif): ACAACACATTT Consensus sequence (reverse complement motif): AAATGTGTTGT Alignment: ACAACACATTT CAAGAKCATCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 36 Motif name: Motif 36 Consensus sequence (original motif): TGGTGTCA Consensus sequence (reverse complement motif): TGACACCA ************************************************************************ Best Matches for Motif ID 36 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 71 AmTGTGACACCACAGT Original Motif Reverse Complement Backward 5 8 0.0205078 Consensus sequence (original motif): AMTGTGACACCACAGT Consensus sequence (reverse complement motif): ACTGTGGTGTCACART Alignment: ACTGTGGTGTCACART ----TGGTGTCA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 AgTGCTCCACTGTGgTGTCACAgT Reverse Complement Reverse Complement Backward 13 8 0.0246479 Consensus sequence (original motif): AGTGCTCCACTGTGGTGTCACAGT Consensus sequence (reverse complement motif): ACTGTGACACCACAGTGGAGCACT Alignment: ACTGTGACACCACAGTGGAGCACT ----TGACACCA------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 TgTGgTGTCACAGTGCTCC Original Motif Original Motif Forward 3 8 0.0338542 Consensus sequence (original motif): TGTGGTGTCACAGTGCTCC Consensus sequence (reverse complement motif): GGAGCACTGTGACACCACA Alignment: TGTGGTGTCACAGTGCTCC --TGGTGTCA--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Original Motif Reverse Complement Forward 7 8 0.035473 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: CCACTGTGVTGTCACAGTGCTCCA ------TGGTGTCA---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Reverse Complement Reverse Complement Forward 13 8 0.0575397 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: AGTGSWSCACTGTGAMAMCACAGTG ------------TGACACCA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 23 Motif 23 Original Motif Original Motif Backward 6 8 0.078125 Consensus sequence (original motif): ATGTWTTCATTMAT Consensus sequence (reverse complement motif): ATYAATGAAWACAT Alignment: ATGTWTTCATTMAT -TGGTGTCA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 15 Motif 15 Reverse Complement Original Motif Forward 1 8 0.078125 Consensus sequence (original motif): AAAGRTMAAACTA Consensus sequence (reverse complement motif): TAGTTTYAKCTTT Alignment: AAAGRTMAAACTA TGACACCA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 16 Motif 16 Original Motif Original Motif Forward 2 8 0.078125 Consensus sequence (original motif): TCTKTGTCAAWA Consensus sequence (reverse complement motif): TWTTGACAYAGA Alignment: TCTKTGTCAAWA -TGGTGTCA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 27 Motif 27 Reverse Complement Reverse Complement Backward 2 8 0.078125 Consensus sequence (original motif): ATTCTGTRAAG Consensus sequence (reverse complement motif): CTTKACAGAAT Alignment: CTTKACAGAAT --TGACACCA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 47 Motif 47 Reverse Complement Original Motif Forward 1 8 0.0915178 Consensus sequence (original motif): YGCCACCTDSTGGY Consensus sequence (reverse complement motif): KCCASDAGGTGGCK Alignment: YGCCACCTDSTGGY TGACACCA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 37 Motif name: Motif 37 Consensus sequence (original motif): ACTTTGG Consensus sequence (reverse complement motif): CCAAAGT ************************************************************************ Best Matches for Motif ID 37 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 69 atactttggc Reverse Complement Reverse Complement Forward 2 7 0 Consensus sequence (original motif): ATACTTTGGC Consensus sequence (reverse complement motif): GCCAAAGTAT Alignment: GCCAAAGTAT -CCAAAGT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 75 wwCCAmAGTCmt Reverse Complement Original Motif Backward 4 7 0.0275974 Consensus sequence (original motif): DDCCAMAGTCHB Consensus sequence (reverse complement motif): VDGACTRTGGDD Alignment: DDCCAMAGTCHB --CCAAAGT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 AgTGCTCCACTGTGgTGTCACAgT Reverse Complement Reverse Complement Forward 10 7 0.056841 Consensus sequence (original motif): AGTGCTCCACTGTGGTGTCACAGT Consensus sequence (reverse complement motif): ACTGTGACACCACAGTGGAGCACT Alignment: ACTGTGACACCACAGTGGAGCACT ---------CCAAAGT-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 71 AmTGTGACACCACAGT Original Motif Reverse Complement Backward 10 7 0.0597098 Consensus sequence (original motif): AMTGTGACACCACAGT Consensus sequence (reverse complement motif): ACTGTGGTGTCACART Alignment: ACTGTGGTGTCACART ACTTTGG--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 76 CAcCACAGTGGAGCAct Original Motif Reverse Complement Forward 9 7 0.061942 Consensus sequence (original motif): CAHCACAGTGGAGCACT Consensus sequence (reverse complement motif): AGTGCTCCACTGTGDTG Alignment: AGTGCTCCACTGTGDTG --------ACTTTGG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 70 CagTGCTCCACTGTGgT Reverse Complement Reverse Complement Forward 2 7 0.0625 Consensus sequence (original motif): CAGTGCTCCACTGTGBT Consensus sequence (reverse complement motif): ABCACAGTGGAGCACTG Alignment: ABCACAGTGGAGCACTG -CCAAAGT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 52 NR2F1 Original Motif Original Motif Forward 4 7 0.0686813 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: TGAMCTTTGMMCYT ---ACTTTGG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Original Motif Forward 2 7 0.0714286 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: CACTGTGRTRTCACAGTGSWSCACT -ACTTTGG----------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Reverse Complement Original Motif Backward 3 7 0.0714286 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: TGGAGCACTGTGACAVCACAGTGG ---------------CCAAAGT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 60 NR1H2RXRA Original Motif Reverse Complement Forward 6 7 0.0728571 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: GTTGACCTTTGACCTTT -----ACTTTGG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 38 Motif name: Motif 38 Consensus sequence (original motif): ATKAYTTTG Consensus sequence (reverse complement motif): CAAAKTYAT ************************************************************************ Best Matches for Motif ID 38 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 33 Motif 33 Original Motif Original Motif Forward 5 9 0.0486111 Consensus sequence (original motif): TTTAATGTYTTTWA Consensus sequence (reverse complement motif): TWAAAKACATTAAA Alignment: TTTAATGTYTTTWA ----ATKAYTTTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 35 Motif 35 Reverse Complement Reverse Complement Forward 1 9 0.0625 Consensus sequence (original motif): AGATGYTCTTG Consensus sequence (reverse complement motif): CAAGAKCATCT Alignment: CAAGAKCATCT CAAAKTYAT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 18 Motif 18 Original Motif Reverse Complement Backward 3 9 0.0625 Consensus sequence (original motif): CAAAGTCCAGC Consensus sequence (reverse complement motif): GCTGGACTTTG Alignment: GCTGGACTTTG ATKAYTTTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 8 Motif 8 Reverse Complement Original Motif Backward 2 9 0.0625 Consensus sequence (original motif): TGAAAATSCTT Consensus sequence (reverse complement motif): AAGSATTTTCA Alignment: TGAAAATSCTT -CAAAKTYAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 49 Motif 49 Original Motif Reverse Complement Backward 6 9 0.0625 Consensus sequence (original motif): AAAAAAAAAAAAAT Consensus sequence (reverse complement motif): ATTTTTTTTTTTTT Alignment: ATTTTTTTTTTTTT ATKAYTTTG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 75 wwCCAmAGTCmt Reverse Complement Original Motif Backward 1 9 0.0650253 Consensus sequence (original motif): DDCCAMAGTCHB Consensus sequence (reverse complement motif): VDGACTRTGGDD Alignment: DDCCAMAGTCHB ---CAAAKTYAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 69 atactttggc Reverse Complement Reverse Complement Backward 1 9 0.0763889 Consensus sequence (original motif): ATACTTTGGC Consensus sequence (reverse complement motif): GCCAAAGTAT Alignment: GCCAAAGTAT -CAAAKTYAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 7 Motif 7 Original Motif Reverse Complement Backward 2 9 0.0763889 Consensus sequence (original motif): AAAATKCTATT Consensus sequence (reverse complement motif): AATAGYATTTT Alignment: AATAGYATTTT -ATKAYTTTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 14 Motif 14 Original Motif Original Motif Forward 3 9 0.0763889 Consensus sequence (original motif): TAATKATATAA Consensus sequence (reverse complement motif): TTATATYATTA Alignment: TAATKATATAA --ATKAYTTTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 46 Motif 46 Reverse Complement Reverse Complement Backward 1 9 0.0763889 Consensus sequence (original motif): ATAGGTTTAGYATA Consensus sequence (reverse complement motif): TATKCTAAACCTAT Alignment: TATKCTAAACCTAT -----CAAAKTYAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 39 Motif name: Motif 39 Consensus sequence (original motif): GCTGTGAC Consensus sequence (reverse complement motif): GTCACAGC ************************************************************************ Best Matches for Motif ID 39 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 TgTGgTGTCACAGTGCTCC Original Motif Reverse Complement Forward 6 8 0.0546875 Consensus sequence (original motif): TGTGGTGTCACAGTGCTCC Consensus sequence (reverse complement motif): GGAGCACTGTGACACCACA Alignment: GGAGCACTGTGACACCACA -----GCTGTGAC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 71 AmTGTGACACCACAGT Reverse Complement Reverse Complement Forward 9 8 0.0551758 Consensus sequence (original motif): AMTGTGACACCACAGT Consensus sequence (reverse complement motif): ACTGTGGTGTCACART Alignment: ACTGTGGTGTCACART --------GTCACAGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 AgTGCTCCACTGTGgTGTCACAgT Original Motif Reverse Complement Backward 17 8 0.0580986 Consensus sequence (original motif): AGTGCTCCACTGTGGTGTCACAGT Consensus sequence (reverse complement motif): ACTGTGACACCACAGTGGAGCACT Alignment: ACTGTGACACCACAGTGGAGCACT GCTGTGAC---------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Reverse Complement Reverse Complement Forward 11 8 0.058277 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: CCACTGTGVTGTCACAGTGCTCCA ----------GTCACAGC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 60 NR1H2RXRA Reverse Complement Original Motif Forward 5 8 0.06375 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC ----GTCACAGC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Reverse Complement Forward 9 8 0.0659722 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: AGTGSWSCACTGTGAMAMCACAGTG --------GCTGTGAC--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 16 Motif 16 Original Motif Original Motif Forward 1 8 0.078125 Consensus sequence (original motif): TCTKTGTCAAWA Consensus sequence (reverse complement motif): TWTTGACAYAGA Alignment: TCTKTGTCAAWA GCTGTGAC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 27 Motif 27 Original Motif Original Motif Backward 2 8 0.078125 Consensus sequence (original motif): ATTCTGTRAAG Consensus sequence (reverse complement motif): CTTKACAGAAT Alignment: ATTCTGTRAAG --GCTGTGAC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 88 TFF11 Reverse Complement Reverse Complement Backward 3 8 0.0926496 Consensus sequence (original motif): CTGCTGBDBBDGBD Consensus sequence (reverse complement motif): HVCDBBDBCAGCAG Alignment: HVCDBBDBCAGCAG ----GTCACAGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 25 Motif 25 Original Motif Reverse Complement Backward 3 8 0.09375 Consensus sequence (original motif): AATAACAGATT Consensus sequence (reverse complement motif): AATCTGTTATT Alignment: AATCTGTTATT -GCTGTGAC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 40 Motif name: Motif 40 Consensus sequence (original motif): AAGTTCA Consensus sequence (reverse complement motif): TGAACTT ************************************************************************ Best Matches for Motif ID 40 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 18 Motif 18 Original Motif Original Motif Forward 3 7 0.0357143 Consensus sequence (original motif): CAAAGTCCAGC Consensus sequence (reverse complement motif): GCTGGACTTTG Alignment: CAAAGTCCAGC --AAGTTCA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 60 NR1H2RXRA Original Motif Original Motif Backward 3 7 0.0371429 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC --------AAGTTCA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 52 NR2F1 Reverse Complement Original Motif Backward 8 7 0.043956 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: TGAMCTTTGMMCYT TGAACTT------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 54 Esrrb Reverse Complement Reverse Complement Backward 6 7 0.0492088 Consensus sequence (original motif): VBBYCAAGGTCA Consensus sequence (reverse complement motif): TGACCTTGMBBB Alignment: TGACCTTGMBBB TGAACTT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 35 Motif 35 Reverse Complement Original Motif Forward 2 7 0.0535714 Consensus sequence (original motif): AGATGYTCTTG Consensus sequence (reverse complement motif): CAAGAKCATCT Alignment: AGATGYTCTTG -TGAACTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 15 Motif 15 Original Motif Original Motif Backward 6 7 0.0535714 Consensus sequence (original motif): AAAGRTMAAACTA Consensus sequence (reverse complement motif): TAGTTTYAKCTTT Alignment: AAAGRTMAAACTA -AAGTTCA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 61 NR4A2 Reverse Complement Reverse Complement Forward 2 7 0.0596546 Consensus sequence (original motif): AAGGTCAC Consensus sequence (reverse complement motif): GTGACCTT Alignment: GTGACCTT -TGAACTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 62 RORA_1 Reverse Complement Reverse Complement Forward 1 7 0.0614286 Consensus sequence (original motif): AWVDAGGTCA Consensus sequence (reverse complement motif): TGACCTDVWT Alignment: TGACCTDVWT TGAACTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 86 TFW2 Reverse Complement Original Motif Backward 4 7 0.0674603 Consensus sequence (original motif): YGGACTTACG Consensus sequence (reverse complement motif): CGTAAGTCCK Alignment: YGGACTTACG TGAACTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 9 Motif 9 Reverse Complement Reverse Complement Backward 6 7 0.0714286 Consensus sequence (original motif): AACATATTTTCA Consensus sequence (reverse complement motif): TGAAAATATGTT Alignment: TGAAAATATGTT TGAACTT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 41 Motif name: Motif 41 Consensus sequence (original motif): TGGAGGAAA Consensus sequence (reverse complement motif): TTTCCTCCA ************************************************************************ Best Matches for Motif ID 41 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 28 Motif 28 Reverse Complement Reverse Complement Forward 1 9 0.0645833 Consensus sequence (original motif): ATTTAGTAAA Consensus sequence (reverse complement motif): TTTACTAAAT Alignment: TTTACTAAAT TTTCCTCCA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 23 Motif 23 Original Motif Reverse Complement Backward 2 9 0.0645833 Consensus sequence (original motif): ATGTWTTCATTMAT Consensus sequence (reverse complement motif): ATYAATGAAWACAT Alignment: ATYAATGAAWACAT ----TGGAGGAAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 70 CagTGCTCCACTGTGgT Original Motif Reverse Complement Forward 8 9 0.068287 Consensus sequence (original motif): CAGTGCTCCACTGTGBT Consensus sequence (reverse complement motif): ABCACAGTGGAGCACTG Alignment: ABCACAGTGGAGCACTG -------TGGAGGAAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 AgTGCTCCACTGTGgTGTCACAgT Original Motif Reverse Complement Backward 1 9 0.0692782 Consensus sequence (original motif): AGTGCTCCACTGTGGTGTCACAGT Consensus sequence (reverse complement motif): ACTGTGACACCACAGTGGAGCACT Alignment: ACTGTGACACCACAGTGGAGCACT ---------------TGGAGGAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 76 CAcCACAGTGGAGCAct Reverse Complement Reverse Complement Backward 9 9 0.0697917 Consensus sequence (original motif): CAHCACAGTGGAGCACT Consensus sequence (reverse complement motif): AGTGCTCCACTGTGDTG Alignment: AGTGCTCCACTGTGDTG TTTCCTCCA-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Reverse Complement Reverse Complement Forward 16 9 0.0844782 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: CCACTGTGVTGTCACAGTGCTCCA ---------------TTTCCTCCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 20 Motif 20 Original Motif Reverse Complement Backward 2 9 0.0923611 Consensus sequence (original motif): TCCTCCTGGAA Consensus sequence (reverse complement motif): TTCCAGGAGGA Alignment: TTCCAGGAGGA -TGGAGGAAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 29 Motif 29 Original Motif Reverse Complement Forward 2 9 0.0923611 Consensus sequence (original motif): ATTTATTGCTA Consensus sequence (reverse complement motif): TAGCAATAAAT Alignment: TAGCAATAAAT -TGGAGGAAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 46 Motif 46 Reverse Complement Reverse Complement Forward 1 9 0.0923611 Consensus sequence (original motif): ATAGGTTTAGYATA Consensus sequence (reverse complement motif): TATKCTAAACCTAT Alignment: TATKCTAAACCTAT TTTCCTCCA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 22 Motif 22 Reverse Complement Reverse Complement Forward 2 9 0.0923611 Consensus sequence (original motif): TTTATGGTGAGCAT Consensus sequence (reverse complement motif): ATGCTCACCATAAA Alignment: ATGCTCACCATAAA -TTTCCTCCA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 42 Motif name: Motif 42 Consensus sequence (original motif): TGAATGAA Consensus sequence (reverse complement motif): TTCATTCA ************************************************************************ Best Matches for Motif ID 42 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 23 Motif 23 Original Motif Reverse Complement Backward 2 8 0.015625 Consensus sequence (original motif): ATGTWTTCATTMAT Consensus sequence (reverse complement motif): ATYAATGAAWACAT Alignment: ATYAATGAAWACAT -----TGAATGAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 44 Motif 44 Reverse Complement Reverse Complement Backward 3 8 0.046875 Consensus sequence (original motif): AATGKAAGAA Consensus sequence (reverse complement motif): TTCTTYCATT Alignment: TTCTTYCATT TTCATTCA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 41 Motif 41 Original Motif Original Motif Forward 1 8 0.0625 Consensus sequence (original motif): TGGAGGAAA Consensus sequence (reverse complement motif): TTTCCTCCA Alignment: TGGAGGAAA TGAATGAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 33 Motif 33 Reverse Complement Reverse Complement Backward 2 8 0.078125 Consensus sequence (original motif): TTTAATGTYTTTWA Consensus sequence (reverse complement motif): TWAAAKACATTAAA Alignment: TWAAAKACATTAAA -----TTCATTCA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 27 Motif 27 Reverse Complement Original Motif Forward 3 8 0.078125 Consensus sequence (original motif): ATTCTGTRAAG Consensus sequence (reverse complement motif): CTTKACAGAAT Alignment: ATTCTGTRAAG --TTCATTCA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 11 Motif 11 Reverse Complement Reverse Complement Forward 1 8 0.078125 Consensus sequence (original motif): AAMATGTTTMAA Consensus sequence (reverse complement motif): TTYAAACATYTT Alignment: TTYAAACATYTT TTCATTCA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 21 Motif 21 Original Motif Reverse Complement Backward 4 8 0.09375 Consensus sequence (original motif): CTGCTTTCCMAA Consensus sequence (reverse complement motif): TTYGGAAAGCAG Alignment: TTYGGAAAGCAG -TGAATGAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 80 taaacgatgcc Original Motif Original Motif Forward 1 8 0.09375 Consensus sequence (original motif): TAAACGATGCC Consensus sequence (reverse complement motif): GGCATCGTTTA Alignment: TAAACGATGCC TGAATGAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 9 Motif 9 Reverse Complement Original Motif Backward 5 8 0.09375 Consensus sequence (original motif): AACATATTTTCA Consensus sequence (reverse complement motif): TGAAAATATGTT Alignment: AACATATTTTCA TTCATTCA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 24 Motif 24 Original Motif Reverse Complement Backward 1 8 0.09375 Consensus sequence (original motif): AAAGWCATWAA Consensus sequence (reverse complement motif): TTWATGWCTTT Alignment: TTWATGWCTTT ---TGAATGAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 43 Motif name: Motif 43 Consensus sequence (original motif): AAKGAAAGGCA Consensus sequence (reverse complement motif): TGCCTTTCYTT ************************************************************************ Best Matches for Motif ID 43 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 4 Motif 4 Reverse Complement Reverse Complement Backward 3 11 0.102273 Consensus sequence (original motif): HAAAAHAAARMAAA Consensus sequence (reverse complement motif): TTTRKTTTHTTTTH Alignment: TTTRKTTTHTTTTH -TGCCTTTCYTT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 49 Motif 49 Reverse Complement Reverse Complement Forward 4 11 0.102273 Consensus sequence (original motif): AAAAAAAAAAAAAT Consensus sequence (reverse complement motif): ATTTTTTTTTTTTT Alignment: ATTTTTTTTTTTTT ---TGCCTTTCYTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 21 Motif 21 Reverse Complement Original Motif Forward 1 11 0.102273 Consensus sequence (original motif): CTGCTTTCCMAA Consensus sequence (reverse complement motif): TTYGGAAAGCAG Alignment: CTGCTTTCCMAA TGCCTTTCYTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 94 TFM13 Reverse Complement Original Motif Forward 3 11 0.112013 Consensus sequence (original motif): TTTTTTTKTTKTTTAATTHW Consensus sequence (reverse complement motif): WHAATTAAARAARAAAAAAA Alignment: TTTTTTTKTTKTTTAATTHW --TGCCTTTCYTT------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 23 Motif 23 Reverse Complement Original Motif Forward 4 11 0.113636 Consensus sequence (original motif): ATGTWTTCATTMAT Consensus sequence (reverse complement motif): ATYAATGAAWACAT Alignment: ATGTWTTCATTMAT ---TGCCTTTCYTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 8 Motif 8 Original Motif Reverse Complement Backward 1 11 0.113636 Consensus sequence (original motif): TGAAAATSCTT Consensus sequence (reverse complement motif): AAGSATTTTCA Alignment: AAGSATTTTCA AAKGAAAGGCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 45 Motif 45 Reverse Complement Original Motif Backward 4 11 0.113636 Consensus sequence (original motif): TAASTCTWTTTTAA Consensus sequence (reverse complement motif): TTAAAAWAGASTTA Alignment: TAASTCTWTTTTAA TGCCTTTCYTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 24 Motif 24 Reverse Complement Reverse Complement Forward 1 11 0.113636 Consensus sequence (original motif): AAAGWCATWAA Consensus sequence (reverse complement motif): TTWATGWCTTT Alignment: TTWATGWCTTT TGCCTTTCYTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 33 Motif 33 Original Motif Reverse Complement Backward 3 11 0.113636 Consensus sequence (original motif): TTTAATGTYTTTWA Consensus sequence (reverse complement motif): TWAAAKACATTAAA Alignment: TWAAAKACATTAAA -AAKGAAAGGCA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 54 Esrrb Original Motif Original Motif Backward 1 11 0.116255 Consensus sequence (original motif): VBBYCAAGGTCA Consensus sequence (reverse complement motif): TGACCTTGMBBB Alignment: VBBYCAAGGTCA -AAKGAAAGGCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 44 Motif name: Motif 44 Consensus sequence (original motif): AATGKAAGAA Consensus sequence (reverse complement motif): TTCTTYCATT ************************************************************************ Best Matches for Motif ID 44 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 23 Motif 23 Original Motif Reverse Complement Backward 4 10 0.0541667 Consensus sequence (original motif): ATGTWTTCATTMAT Consensus sequence (reverse complement motif): ATYAATGAAWACAT Alignment: ATYAATGAAWACAT -AATGKAAGAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 14 Motif 14 Reverse Complement Reverse Complement Forward 1 10 0.0541667 Consensus sequence (original motif): TAATKATATAA Consensus sequence (reverse complement motif): TTATATYATTA Alignment: TTATATYATTA TTCTTYCATT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 25 Motif 25 Reverse Complement Reverse Complement Backward 1 10 0.0666667 Consensus sequence (original motif): AATAACAGATT Consensus sequence (reverse complement motif): AATCTGTTATT Alignment: AATCTGTTATT -TTCTTYCATT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 49 Motif 49 Reverse Complement Reverse Complement Forward 2 10 0.0666667 Consensus sequence (original motif): AAAAAAAAAAAAAT Consensus sequence (reverse complement motif): ATTTTTTTTTTTTT Alignment: ATTTTTTTTTTTTT -TTCTTYCATT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 17 Motif 17 Reverse Complement Original Motif Forward 1 10 0.0666667 Consensus sequence (original motif): CTTCTGACCTC Consensus sequence (reverse complement motif): GAGGTCAGAAG Alignment: CTTCTGACCTC TTCTTYCATT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 43 Motif 43 Reverse Complement Reverse Complement Forward 2 10 0.0666667 Consensus sequence (original motif): AAKGAAAGGCA Consensus sequence (reverse complement motif): TGCCTTTCYTT Alignment: TGCCTTTCYTT -TTCTTYCATT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 94 TFM13 Original Motif Reverse Complement Backward 9 10 0.0684524 Consensus sequence (original motif): TTTTTTTKTTKTTTAATTHW Consensus sequence (reverse complement motif): WHAATTAAARAARAAAAAAA Alignment: WHAATTAAARAARAAAAAAA --AATGKAAGAA-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 4 Motif 4 Reverse Complement Reverse Complement Forward 2 10 0.0754167 Consensus sequence (original motif): HAAAAHAAARMAAA Consensus sequence (reverse complement motif): TTTRKTTTHTTTTH Alignment: TTTRKTTTHTTTTH -TTCTTYCATT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 24 Motif 24 Original Motif Original Motif Forward 1 10 0.0791667 Consensus sequence (original motif): AAAGWCATWAA Consensus sequence (reverse complement motif): TTWATGWCTTT Alignment: AAAGWCATWAA AATGKAAGAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 31 Motif 31 Original Motif Reverse Complement Backward 2 10 0.0791667 Consensus sequence (original motif): TTGTTGATTTT Consensus sequence (reverse complement motif): AAAATCAACAA Alignment: AAAATCAACAA AATGKAAGAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 45 Motif name: Motif 45 Consensus sequence (original motif): TAASTCTWTTTTAA Consensus sequence (reverse complement motif): TTAAAAWAGASTTA ************************************************************************ Best Matches for Motif ID 45 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 94 TFM13 Reverse Complement Reverse Complement Forward 5 14 0.100765 Consensus sequence (original motif): TTTTTTTKTTKTTTAATTHW Consensus sequence (reverse complement motif): WHAATTAAARAARAAAAAAA Alignment: WHAATTAAARAARAAAAAAA ----TTAAAAWAGASTTA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 91 TFM3 Reverse Complement Reverse Complement Backward 3 14 0.104911 Consensus sequence (original motif): KTTTTTTKTTTTTTDAAB Consensus sequence (reverse complement motif): BTTHAAAAAAYAAAAAAR Alignment: BTTHAAAAAAYAAAAAAR --TTAAAAWAGASTTA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 33 Motif 33 Reverse Complement Reverse Complement Backward 2 13 0.576923 Consensus sequence (original motif): TTTAATGTYTTTWA Consensus sequence (reverse complement motif): TWAAAKACATTAAA Alignment: -TWAAAKACATTAAA TTAAAAWAGASTTA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 4 Motif 4 Reverse Complement Original Motif Forward 2 13 0.591346 Consensus sequence (original motif): HAAAAHAAARMAAA Consensus sequence (reverse complement motif): TTTRKTTTHTTTTH Alignment: HAAAAHAAARMAAA- -TTAAAAWAGASTTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 23 Motif 23 Reverse Complement Reverse Complement Forward 2 13 0.605769 Consensus sequence (original motif): ATGTWTTCATTMAT Consensus sequence (reverse complement motif): ATYAATGAAWACAT Alignment: ATYAATGAAWACAT- -TTAAAAWAGASTTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 46 Motif 46 Original Motif Original Motif Forward 2 13 0.605769 Consensus sequence (original motif): ATAGGTTTAGYATA Consensus sequence (reverse complement motif): TATKCTAAACCTAT Alignment: ATAGGTTTAGYATA- -TAASTCTWTTTTAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 49 Motif 49 Original Motif Reverse Complement Backward 2 13 0.605769 Consensus sequence (original motif): AAAAAAAAAAAAAT Consensus sequence (reverse complement motif): ATTTTTTTTTTTTT Alignment: -ATTTTTTTTTTTTT TAASTCTWTTTTAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Reverse Complement Reverse Complement Forward 13 13 0.620726 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: AGTGSWSCACTGTGAMAMCACAGTG- ------------TTAAAAWAGASTTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 15 Motif 15 Reverse Complement Original Motif Forward 1 13 0.625 Consensus sequence (original motif): AAAGRTMAAACTA Consensus sequence (reverse complement motif): TAGTTTYAKCTTT Alignment: AAAGRTMAAACTA- TTAAAAWAGASTTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 9 Motif 9 Reverse Complement Reverse Complement Forward 1 12 1.09375 Consensus sequence (original motif): AACATATTTTCA Consensus sequence (reverse complement motif): TGAAAATATGTT Alignment: TGAAAATATGTT-- TTAAAAWAGASTTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 46 Motif name: Motif 46 Consensus sequence (original motif): ATAGGTTTAGYATA Consensus sequence (reverse complement motif): TATKCTAAACCTAT ************************************************************************ Best Matches for Motif ID 46 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 15 Motif 15 Reverse Complement Original Motif Backward 1 13 0.0865385 Consensus sequence (original motif): AAAGRTMAAACTA Consensus sequence (reverse complement motif): TAGTTTYAKCTTT Alignment: -AAAGRTMAAACTA TATKCTAAACCTAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 22 Motif 22 Original Motif Original Motif Forward 2 13 0.0865385 Consensus sequence (original motif): TTTATGGTGAGCAT Consensus sequence (reverse complement motif): ATGCTCACCATAAA Alignment: TTTATGGTGAGCAT- -ATAGGTTTAGYATA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 45 Motif 45 Original Motif Original Motif Backward 2 13 0.105769 Consensus sequence (original motif): TAASTCTWTTTTAA Consensus sequence (reverse complement motif): TTAAAAWAGASTTA Alignment: -TAASTCTWTTTTAA ATAGGTTTAGYATA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 23 Motif 23 Reverse Complement Reverse Complement Forward 3 12 0.614583 Consensus sequence (original motif): ATGTWTTCATTMAT Consensus sequence (reverse complement motif): ATYAATGAAWACAT Alignment: ATYAATGAAWACAT-- --TATKCTAAACCTAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 33 Motif 33 Original Motif Original Motif Forward 3 12 0.625 Consensus sequence (original motif): TTTAATGTYTTTWA Consensus sequence (reverse complement motif): TWAAAKACATTAAA Alignment: TTTAATGTYTTTWA-- --ATAGGTTTAGYATA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 11 Motif 11 Reverse Complement Reverse Complement Backward 2 11 1.09091 Consensus sequence (original motif): AAMATGTTTMAA Consensus sequence (reverse complement motif): TTYAAACATYTT Alignment: ---TTYAAACATYTT TATKCTAAACCTAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 80 taaacgatgcc Original Motif Reverse Complement Backward 1 11 1.10227 Consensus sequence (original motif): TAAACGATGCC Consensus sequence (reverse complement motif): GGCATCGTTTA Alignment: ---GGCATCGTTTA ATAGGTTTAGYATA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 12 Motif 12 Reverse Complement Original Motif Forward 1 11 1.10227 Consensus sequence (original motif): ACAACACATTT Consensus sequence (reverse complement motif): AAATGTGTTGT Alignment: ACAACACATTT--- TATKCTAAACCTAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 18 Motif 18 Reverse Complement Reverse Complement Backward 1 11 1.125 Consensus sequence (original motif): CAAAGTCCAGC Consensus sequence (reverse complement motif): GCTGGACTTTG Alignment: ---GCTGGACTTTG TATKCTAAACCTAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 9 Motif 9 Reverse Complement Reverse Complement Backward 2 11 1.125 Consensus sequence (original motif): AACATATTTTCA Consensus sequence (reverse complement motif): TGAAAATATGTT Alignment: ---TGAAAATATGTT TATKCTAAACCTAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 47 Motif name: Motif 47 Consensus sequence (original motif): YGCCACCTDSTGGY Consensus sequence (reverse complement motif): KCCASDAGGTGGCK ************************************************************************ Best Matches for Motif ID 47 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 66 CTCF Original Motif Reverse Complement Backward 3 14 0.0209936 Consensus sequence (original motif): YDRCCASYAGRKGGCRSYV Consensus sequence (reverse complement motif): BMSMGCCYMCTKSTGGMHM Alignment: BMSMGCCYMCTKSTGGMHM ---YGCCACCTDSTGGY-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 70 CagTGCTCCACTGTGgT Original Motif Original Motif Forward 4 14 0.0790816 Consensus sequence (original motif): CAGTGCTCCACTGTGBT Consensus sequence (reverse complement motif): ABCACAGTGGAGCACTG Alignment: CAGTGCTCCACTGTGBT ---YGCCACCTDSTGGY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 76 CAcCACAGTGGAGCAct Original Motif Reverse Complement Backward 2 14 0.0804767 Consensus sequence (original motif): CAHCACAGTGGAGCACT Consensus sequence (reverse complement motif): AGTGCTCCACTGTGDTG Alignment: AGTGCTCCACTGTGDTG --YGCCACCTDSTGGY- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 AgTGCTCCACTGTGgTGTCACAgT Original Motif Original Motif Forward 3 14 0.0836896 Consensus sequence (original motif): AGTGCTCCACTGTGGTGTCACAGT Consensus sequence (reverse complement motif): ACTGTGACACCACAGTGGAGCACT Alignment: AGTGCTCCACTGTGGTGTCACAGT --YGCCACCTDSTGGY-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 93 TFM12 Reverse Complement Original Motif Forward 4 14 0.0913786 Consensus sequence (original motif): RAGKGMAGVRRGSRCASAGV Consensus sequence (reverse complement motif): VCTSTGKSCMKBCTRCYCTK Alignment: RAGKGMAGVRRGSRCASAGV ---KCCASDAGGTGGCK--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 90 TFM2 Original Motif Original Motif Forward 6 13 0.582451 Consensus sequence (original motif): CHHCHBTCCTSCYTCTGC Consensus sequence (reverse complement motif): GCAGAKGSAGGABDGHDG Alignment: CHHCHBTCCTSCYTCTGC- -----YGCCACCTDSTGGY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Original Motif Reverse Complement Forward 8 13 0.590483 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV- -------YGCCACCTDSTGGY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 54 Esrrb Reverse Complement Original Motif Forward 1 12 1.08988 Consensus sequence (original motif): VBBYCAAGGTCA Consensus sequence (reverse complement motif): TGACCTTGMBBB Alignment: VBBYCAAGGTCA-- KCCASDAGGTGGCK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Original Motif Reverse Complement Backward 13 12 1.09162 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: --CCACTGTGVTGTCACAGTGCTCCA YGCCACCTDSTGGY------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 74 ssCCCCGCSssk Original Motif Original Motif Forward 1 12 1.09358 Consensus sequence (original motif): SBCCCCGCCSBB Consensus sequence (reverse complement motif): BBSGGCGGGGBS Alignment: SBCCCCGCCSBB-- YGCCACCTDSTGGY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 48 Motif name: Motif 48 Consensus sequence (original motif): GCARRGGSAGS Consensus sequence (reverse complement motif): SCTSCCKMTGC ************************************************************************ Best Matches for Motif ID 48 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 1 Motif 1 Original Motif Reverse Complement Forward 1 11 0 Consensus sequence (original motif): CYTSCCTCTGC Consensus sequence (reverse complement motif): GCAGAGGSAKG Alignment: GCAGAGGSAKG GCARRGGSAGS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 90 TFM2 Original Motif Reverse Complement Forward 1 11 0.000952693 Consensus sequence (original motif): CHHCHBTCCTSCYTCTGC Consensus sequence (reverse complement motif): GCAGAKGSAGGABDGHDG Alignment: GCAGAKGSAGGABDGHDG GCARRGGSAGS------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 66 CTCF Original Motif Original Motif Backward 3 11 0.033658 Consensus sequence (original motif): YDRCCASYAGRKGGCRSYV Consensus sequence (reverse complement motif): BMSMGCCYMCTKSTGGMHM Alignment: YDRCCASYAGRKGGCRSYV ------GCARRGGSAGS-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 88 TFF11 Reverse Complement Original Motif Forward 3 11 0.0410341 Consensus sequence (original motif): CTGCTGBDBBDGBD Consensus sequence (reverse complement motif): HVCDBBDBCAGCAG Alignment: CTGCTGBDBBDGBD --SCTSCCKMTGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 93 TFM12 Original Motif Original Motif Backward 6 11 0.0422459 Consensus sequence (original motif): RAGKGMAGVRRGSRCASAGV Consensus sequence (reverse complement motif): VCTSTGKSCMKBCTRCYCTK Alignment: RAGKGMAGVRRGSRCASAGV ----GCARRGGSAGS----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 65 Tcfcp2l1 Reverse Complement Original Motif Forward 1 11 0.0533531 Consensus sequence (original motif): CCAGYYHVADCCRG Consensus sequence (reverse complement motif): CKGGDTBDMMCTGG Alignment: CCAGYYHVADCCRG SCTSCCKMTGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Reverse Complement Reverse Complement Forward 4 11 0.0578944 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA ---SCTSCCKMTGC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Original Motif Original Motif Forward 3 11 0.0620615 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY --GCARRGGSAGS------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 3 Motif 3 Original Motif Original Motif Forward 1 11 0.0627554 Consensus sequence (original motif): HCAGRRVACASAG Consensus sequence (reverse complement motif): CTSTGTBKMCTGH Alignment: HCAGRRVACASAG GCARRGGSAGS-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 ESR2 Reverse Complement Original Motif Backward 5 11 0.0646979 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: VHRGGTCABDBTGMCCTB ---SCTSCCKMTGC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 49 Motif name: Motif 49 Consensus sequence (original motif): AAAAAAAAAAAAAT Consensus sequence (reverse complement motif): ATTTTTTTTTTTTT ************************************************************************ Best Matches for Motif ID 49 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 94 TFM13 Original Motif Reverse Complement Backward 1 14 0.0548469 Consensus sequence (original motif): TTTTTTTKTTKTTTAATTHW Consensus sequence (reverse complement motif): WHAATTAAARAARAAAAAAA Alignment: WHAATTAAARAARAAAAAAA ------AAAAAAAAAAAAAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 91 TFM3 Reverse Complement Original Motif Forward 1 14 0.0602679 Consensus sequence (original motif): KTTTTTTKTTTTTTDAAB Consensus sequence (reverse complement motif): BTTHAAAAAAYAAAAAAR Alignment: KTTTTTTKTTTTTTDAAB ATTTTTTTTTTTTT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 4 Motif 4 Original Motif Original Motif Forward 1 14 0.0767857 Consensus sequence (original motif): HAAAAHAAARMAAA Consensus sequence (reverse complement motif): TTTRKTTTHTTTTH Alignment: HAAAAHAAARMAAA AAAAAAAAAAAAAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 23 Motif 23 Original Motif Reverse Complement Backward 1 14 0.0982143 Consensus sequence (original motif): ATGTWTTCATTMAT Consensus sequence (reverse complement motif): ATYAATGAAWACAT Alignment: ATYAATGAAWACAT AAAAAAAAAAAAAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 33 Motif 33 Original Motif Reverse Complement Forward 1 14 0.107143 Consensus sequence (original motif): TTTAATGTYTTTWA Consensus sequence (reverse complement motif): TWAAAKACATTAAA Alignment: TWAAAKACATTAAA AAAAAAAAAAAAAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 15 Motif 15 Reverse Complement Reverse Complement Backward 1 13 0.596154 Consensus sequence (original motif): AAAGRTMAAACTA Consensus sequence (reverse complement motif): TAGTTTYAKCTTT Alignment: -TAGTTTYAKCTTT ATTTTTTTTTTTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 45 Motif 45 Original Motif Reverse Complement Forward 2 13 0.605769 Consensus sequence (original motif): TAASTCTWTTTTAA Consensus sequence (reverse complement motif): TTAAAAWAGASTTA Alignment: TTAAAAWAGASTTA- -AAAAAAAAAAAAAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 9 Motif 9 Original Motif Reverse Complement Forward 1 12 1.125 Consensus sequence (original motif): AACATATTTTCA Consensus sequence (reverse complement motif): TGAAAATATGTT Alignment: TGAAAATATGTT-- AAAAAAAAAAAAAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 11 Motif 11 Reverse Complement Reverse Complement Backward 1 12 1.125 Consensus sequence (original motif): AAMATGTTTMAA Consensus sequence (reverse complement motif): TTYAAACATYTT Alignment: --TTYAAACATYTT ATTTTTTTTTTTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 31 Motif 31 Reverse Complement Original Motif Forward 1 11 1.56818 Consensus sequence (original motif): TTGTTGATTTT Consensus sequence (reverse complement motif): AAAATCAACAA Alignment: TTGTTGATTTT--- ATTTTTTTTTTTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 50 Motif name: Motif 50 Consensus sequence (original motif): GGAAM Consensus sequence (reverse complement motif): YTTCC ************************************************************************ Best Matches for Motif ID 50 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 41 Motif 41 Reverse Complement Reverse Complement Backward 5 5 0.01875 Consensus sequence (original motif): TGGAGGAAA Consensus sequence (reverse complement motif): TTTCCTCCA Alignment: TTTCCTCCA YTTCC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 21 Motif 21 Reverse Complement Original Motif Backward 5 5 0.01875 Consensus sequence (original motif): CTGCTTTCCMAA Consensus sequence (reverse complement motif): TTYGGAAAGCAG Alignment: CTGCTTTCCMAA ---YTTCC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 43 Motif 43 Reverse Complement Reverse Complement Backward 3 5 0.04375 Consensus sequence (original motif): AAKGAAAGGCA Consensus sequence (reverse complement motif): TGCCTTTCYTT Alignment: TGCCTTTCYTT ----YTTCC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 44 Motif 44 Reverse Complement Reverse Complement Backward 4 5 0.05625 Consensus sequence (original motif): AATGKAAGAA Consensus sequence (reverse complement motif): TTCTTYCATT Alignment: TTCTTYCATT --YTTCC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 8 Motif 8 Reverse Complement Reverse Complement Backward 1 5 0.06875 Consensus sequence (original motif): TGAAAATSCTT Consensus sequence (reverse complement motif): AAGSATTTTCA Alignment: AAGSATTTTCA ------YTTCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 9 Motif 9 Original Motif Reverse Complement Backward 1 5 0.06875 Consensus sequence (original motif): AACATATTTTCA Consensus sequence (reverse complement motif): TGAAAATATGTT Alignment: TGAAAATATGTT -------GGAAM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 19 Motif 19 Reverse Complement Reverse Complement Forward 2 5 0.06875 Consensus sequence (original motif): AGAGAAAG Consensus sequence (reverse complement motif): CTTTCTCT Alignment: CTTTCTCT -YTTCC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 28 Motif 28 Reverse Complement Reverse Complement Forward 1 5 0.06875 Consensus sequence (original motif): ATTTAGTAAA Consensus sequence (reverse complement motif): TTTACTAAAT Alignment: TTTACTAAAT YTTCC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Reverse Complement Reverse Complement Backward 12 5 0.0747947 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA -----YTTCC----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 23 Motif 23 Original Motif Reverse Complement Backward 6 5 0.075 Consensus sequence (original motif): ATGTWTTCATTMAT Consensus sequence (reverse complement motif): ATYAATGAAWACAT Alignment: ATYAATGAAWACAT ----GGAAM----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 51 Motif name: HNF4A Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK ************************************************************************ Best Matches for Motif ID 51 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 64 PPARGRXRA Original Motif Original Motif Forward 3 13 0 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA --RGGBCAAAGKYCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 52 NR2F1 Original Motif Reverse Complement Forward 2 13 0.0227413 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: AKGYYCAAAGRTCA -RGGBCAAAGKYCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 60 NR1H2RXRA Original Motif Original Motif Backward 3 13 0.0423023 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC --RGGBCAAAGKYCA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Original Motif Backward 6 13 0.0557654 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: CACTGTGRTRTCACAGTGSWSCACT -------RGGBCAAAGKYCA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 93 TFM12 Reverse Complement Reverse Complement Backward 2 13 0.0609093 Consensus sequence (original motif): RAGKGMAGVRRGSRCASAGV Consensus sequence (reverse complement motif): VCTSTGKSCMKBCTRCYCTK Alignment: VCTSTGKSCMKBCTRCYCTK ------TGMYCTTTGBCCK- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Original Motif Reverse Complement Backward 4 13 0.0656443 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: CCACTGTGVTGTCACAGTGCTCCA --------RGGBCAAAGKYCA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 ESR2 Original Motif Original Motif Forward 3 13 0.0671615 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: VHRGGTCABDBTGMCCTB --RGGBCAAAGKYCA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 TgTGgTGTCACAGTGCTCC Original Motif Original Motif Backward 3 13 0.0681338 Consensus sequence (original motif): TGTGGTGTCACAGTGCTCC Consensus sequence (reverse complement motif): GGAGCACTGTGACACCACA Alignment: TGTGGTGTCACAGTGCTCC ----RGGBCAAAGKYCA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Original Motif Reverse Complement Forward 1 13 0.0711137 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV RGGBCAAAGKYCA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Reverse Complement Reverse Complement Backward 4 13 0.0741922 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA -----TGMYCTTTGBCCK--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 52 Motif name: NR2F1 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA ************************************************************************ Best Matches for Motif ID 52 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 60 NR1H2RXRA Original Motif Reverse Complement Backward 2 14 0.0289973 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: GTTGACCTTTGACCTTT --TGAMCTTTGMMCYT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 64 PPARGRXRA Original Motif Reverse Complement Backward 2 14 0.0393667 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: TGRCCTKTGHCCKAB TGAMCTTTGMMCYT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Reverse Complement Backward 7 14 0.0713032 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: AGTGSWSCACTGTGAMAMCACAGTG -----TGAMCTTTGMMCYT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 93 TFM12 Reverse Complement Original Motif Forward 3 14 0.0742967 Consensus sequence (original motif): RAGKGMAGVRRGSRCASAGV Consensus sequence (reverse complement motif): VCTSTGKSCMKBCTRCYCTK Alignment: RAGKGMAGVRRGSRCASAGV --AKGYYCAAAGRTCA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 ESR2 Original Motif Reverse Complement Forward 4 14 0.0825859 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: BAGGYCABHBTGACCKHV ---TGAMCTTTGMMCYT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Reverse Complement Original Motif Backward 6 14 0.0833345 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC --AKGYYCAAAGRTCA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Original Motif Original Motif Backward 8 14 0.0852669 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: TGGAGCACTGTGACAVCACAGTGG ---TGAMCTTTGMMCYT------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 TgTGgTGTCACAGTGCTCC Original Motif Reverse Complement Backward 4 14 0.0855082 Consensus sequence (original motif): TGTGGTGTCACAGTGCTCC Consensus sequence (reverse complement motif): GGAGCACTGTGACACCACA Alignment: GGAGCACTGTGACACCACA --TGAMCTTTGMMCYT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 51 HNF4A Original Motif Reverse Complement Backward 1 13 0.525587 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: -TGMYCTTTGBCCK TGAMCTTTGMMCYT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Original Motif Original Motif Forward 8 13 0.581407 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY- -------TGAMCTTTGMMCYT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 53 Motif name: ESR1 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV ************************************************************************ Best Matches for Motif ID 53 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Original Motif Reverse Complement Backward 2 20 0.0722586 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: CCACTGTGVTGTCACAGTGCTCCA ---VDBHMAGGTCACCCTGACCY- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Original Motif Forward 3 20 0.0818971 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: CACTGTGRTRTCACAGTGSWSCACT --VDBHMAGGTCACCCTGACCY--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 93 TFM12 Original Motif Reverse Complement Backward 2 19 0.553964 Consensus sequence (original motif): RAGKGMAGVRRGSRCASAGV Consensus sequence (reverse complement motif): VCTSTGKSCMKBCTRCYCTK Alignment: -VCTSTGKSCMKBCTRCYCTK VDBHMAGGTCACCCTGACCY- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 TgTGgTGTCACAGTGCTCC Original Motif Original Motif Backward 1 19 0.566376 Consensus sequence (original motif): TGTGGTGTCACAGTGCTCC Consensus sequence (reverse complement motif): GGAGCACTGTGACACCACA Alignment: -TGTGGTGTCACAGTGCTCC VDBHMAGGTCACCCTGACCY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 66 CTCF Original Motif Reverse Complement Backward 1 19 0.579928 Consensus sequence (original motif): YDRCCASYAGRKGGCRSYV Consensus sequence (reverse complement motif): BMSMGCCYMCTKSTGGMHM Alignment: -BMSMGCCYMCTKSTGGMHM VDBHMAGGTCACCCTGACCY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 ESR2 Original Motif Original Motif Backward 2 17 1.50287 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: ---VHRGGTCABDBTGMCCTB VDBHMAGGTCACCCTGACCY- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 90 TFM2 Original Motif Original Motif Forward 2 17 1.55953 Consensus sequence (original motif): CHHCHBTCCTSCYTCTGC Consensus sequence (reverse complement motif): GCAGAKGSAGGABDGHDG Alignment: CHHCHBTCCTSCYTCTGC--- -VDBHMAGGTCACCCTGACCY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 89 TFM1 Original Motif Original Motif Backward 2 17 1.5827 Consensus sequence (original motif): CACACACACACWCACACA Consensus sequence (reverse complement motif): TGTGTGWGTGTGTGTGTG Alignment: ---CACACACACACWCACACA VDBHMAGGTCACCCTGACCY- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Original Motif Original Motif Forward 6 16 2.07409 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC---- -----VDBHMAGGTCACCCTGACCY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 71 AmTGTGACACCACAGT Original Motif Reverse Complement Forward 2 15 2.57517 Consensus sequence (original motif): AMTGTGACACCACAGT Consensus sequence (reverse complement motif): ACTGTGGTGTCACART Alignment: ACTGTGGTGTCACART----- -VDBHMAGGTCACCCTGACCY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 54 Motif name: Esrrb Consensus sequence (original motif): VBBYCAAGGTCA Consensus sequence (reverse complement motif): TGACCTTGMBBB ************************************************************************ Best Matches for Motif ID 54 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 52 NR2F1 Reverse Complement Original Motif Backward 1 12 0.0613872 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: TGAMCTTTGMMCYT --TGACCTTGMBBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 64 PPARGRXRA Original Motif Original Motif Forward 4 12 0.0641161 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA ---VBBYCAAGGTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 51 HNF4A Original Motif Original Motif Backward 1 12 0.0642069 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: RGGBCAAAGKYCA -VBBYCAAGGTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 60 NR1H2RXRA Original Motif Original Motif Backward 3 12 0.0678238 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC ---VBBYCAAGGTCA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Reverse Complement Original Motif Backward 9 12 0.0799744 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY TGACCTTGMBBB-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 ESR2 Reverse Complement Original Motif Forward 6 12 0.0865873 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: VHRGGTCABDBTGMCCTB -----TGACCTTGMBBB- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Original Motif Original Motif Forward 5 12 0.0884496 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC ----VBBYCAAGGTCA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 TgTGgTGTCACAGTGCTCC Reverse Complement Original Motif Backward 1 12 0.0943816 Consensus sequence (original motif): TGTGGTGTCACAGTGCTCC Consensus sequence (reverse complement motif): GGAGCACTGTGACACCACA Alignment: TGTGGTGTCACAGTGCTCC -------TGACCTTGMBBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Reverse Complement Reverse Complement Forward 12 12 0.0956646 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: CCACTGTGVTGTCACAGTGCTCCA -----------TGACCTTGMBBB- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Reverse Complement Backward 11 12 0.100398 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: AGTGSWSCACTGTGAMAMCACAGTG ---VBBYCAAGGTCA---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 55 Motif name: ZEB1 Consensus sequence (original motif): CACCTD Consensus sequence (reverse complement motif): HAGGTG ************************************************************************ Best Matches for Motif ID 55 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 47 Motif 47 Original Motif Original Motif Backward 6 6 0 Consensus sequence (original motif): YGCCACCTDSTGGY Consensus sequence (reverse complement motif): KCCASDAGGTGGCK Alignment: YGCCACCTDSTGGY ---CACCTD----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 5 Motif 5 Original Motif Original Motif Backward 3 6 0.00902841 Consensus sequence (original motif): CWGAGCCAYCTYTC Consensus sequence (reverse complement motif): GAKAGKTGGCTCWG Alignment: CWGAGCCAYCTYTC ------CACCTD-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 66 CTCF Reverse Complement Original Motif Forward 8 6 0.0118423 Consensus sequence (original motif): YDRCCASYAGRKGGCRSYV Consensus sequence (reverse complement motif): BMSMGCCYMCTKSTGGMHM Alignment: YDRCCASYAGRKGGCRSYV -------HAGGTG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 62 RORA_1 Original Motif Reverse Complement Backward 4 6 0.0187312 Consensus sequence (original motif): AWVDAGGTCA Consensus sequence (reverse complement motif): TGACCTDVWT Alignment: TGACCTDVWT -CACCTD--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Reverse Complement Reverse Complement Backward 6 6 0.0189156 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA ----------HAGGTG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 54 Esrrb Reverse Complement Original Motif Forward 2 6 0.0248883 Consensus sequence (original motif): VBBYCAAGGTCA Consensus sequence (reverse complement motif): TGACCTTGMBBB Alignment: VBBYCAAGGTCA -HAGGTG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 60 NR1H2RXRA Original Motif Reverse Complement Backward 2 6 0.0278775 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: GTTGACCTTTGACCTTT ----------CACCTD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 46 Motif 46 Original Motif Reverse Complement Backward 8 6 0.0285279 Consensus sequence (original motif): ATAGGTTTAGYATA Consensus sequence (reverse complement motif): TATKCTAAACCTAT Alignment: TATKCTAAACCTAT -CACCTD------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 64 PPARGRXRA Original Motif Reverse Complement Backward 9 6 0.0310859 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: TGRCCTKTGHCCKAB -CACCTD-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 61 NR4A2 Original Motif Reverse Complement Backward 1 6 0.0334919 Consensus sequence (original motif): AAGGTCAC Consensus sequence (reverse complement motif): GTGACCTT Alignment: GTGACCTT --CACCTD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 56 Motif name: Mycn Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD ************************************************************************ Best Matches for Motif ID 56 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 58 Myc Reverse Complement Reverse Complement Forward 1 10 0 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: DCCACGTGCV GCCACGTGSD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 68 sscCCCGCGcs Reverse Complement Original Motif Backward 1 10 0.0654819 Consensus sequence (original motif): BSCCCCGCGBS Consensus sequence (reverse complement motif): SBCGCGGGGSB Alignment: BSCCCCGCGBS -GCCACGTGSD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 66 CTCF Original Motif Original Motif Forward 6 10 0.0679017 Consensus sequence (original motif): YDRCCASYAGRKGGCRSYV Consensus sequence (reverse complement motif): BMSMGCCYMCTKSTGGMHM Alignment: YDRCCASYAGRKGGCRSYV -----HSCACGTGGC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 74 ssCCCCGCSssk Original Motif Reverse Complement Forward 2 10 0.0704988 Consensus sequence (original motif): SBCCCCGCCSBB Consensus sequence (reverse complement motif): BBSGGCGGGGBS Alignment: BBSGGCGGGGBS -HSCACGTGGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 47 Motif 47 Original Motif Reverse Complement Backward 4 10 0.0733001 Consensus sequence (original motif): YGCCACCTDSTGGY Consensus sequence (reverse complement motif): KCCASDAGGTGGCK Alignment: KCCASDAGGTGGCK -HSCACGTGGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Reverse Complement Reverse Complement Backward 10 10 0.0883224 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: AGTGSWSCACTGTGAMAMCACAGTG ------GCCACGTGSD--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Reverse Complement Reverse Complement Backward 3 10 0.089863 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV --------GCCACGTGSD-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 70 CagTGCTCCACTGTGgT Reverse Complement Reverse Complement Backward 7 10 0.0943014 Consensus sequence (original motif): CAGTGCTCCACTGTGBT Consensus sequence (reverse complement motif): ABCACAGTGGAGCACTG Alignment: ABCACAGTGGAGCACTG -GCCACGTGSD------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 51 HNF4A Reverse Complement Reverse Complement Forward 2 10 0.0947124 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: TGMYCTTTGBCCK -GCCACGTGSD-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 AgTGCTCCACTGTGgTGTCACAgT Reverse Complement Reverse Complement Backward 6 10 0.0949359 Consensus sequence (original motif): AGTGCTCCACTGTGGTGTCACAGT Consensus sequence (reverse complement motif): ACTGTGACACCACAGTGGAGCACT Alignment: ACTGTGACACCACAGTGGAGCACT ---------GCCACGTGSD----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 57 Motif name: REST Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA ************************************************************************ Best Matches for Motif ID 57 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 93 TFM12 Reverse Complement Reverse Complement Backward 1 20 0.0656473 Consensus sequence (original motif): RAGKGMAGVRRGSRCASAGV Consensus sequence (reverse complement motif): VCTSTGKSCMKBCTRCYCTK Alignment: -VCTSTGKSCMKBCTRCYCTK GGYGCTGTCCATGGTGCTGAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 AgTGCTCCACTGTGgTGTCACAgT Reverse Complement Original Motif Backward 6 19 0.560523 Consensus sequence (original motif): AGTGCTCCACTGTGGTGTCACAGT Consensus sequence (reverse complement motif): ACTGTGACACCACAGTGGAGCACT Alignment: --AGTGCTCCACTGTGGTGTCACAGT GGYGCTGTCCATGGTGCTGAA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Original Motif Original Motif Backward 5 16 2.06264 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: -----VDBHMAGGTCACCCTGACCY TTCAGCACCATGGACAGCKCC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 90 TFM2 Reverse Complement Original Motif Forward 5 14 3.06651 Consensus sequence (original motif): CHHCHBTCCTSCYTCTGC Consensus sequence (reverse complement motif): GCAGAKGSAGGABDGHDG Alignment: CHHCHBTCCTSCYTCTGC------- ----GGYGCTGTCCATGGTGCTGAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 70 CagTGCTCCACTGTGgT Reverse Complement Reverse Complement Backward 4 14 3.07032 Consensus sequence (original motif): CAGTGCTCCACTGTGBT Consensus sequence (reverse complement motif): ABCACAGTGGAGCACTG Alignment: -------ABCACAGTGGAGCACTG GGYGCTGTCCATGGTGCTGAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 71 AmTGTGACACCACAGT Reverse Complement Reverse Complement Forward 3 14 3.07054 Consensus sequence (original motif): AMTGTGACACCACAGT Consensus sequence (reverse complement motif): ACTGTGGTGTCACART Alignment: ACTGTGGTGTCACART------- --GGYGCTGTCCATGGTGCTGAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Original Motif Original Motif Forward 12 13 3.54841 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: TGGAGCACTGTGACAVCACAGTGG-------- -----------TTCAGCACCATGGACAGCKCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 ESR2 Reverse Complement Reverse Complement Forward 6 13 3.55156 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: BAGGYCABHBTGACCKHV-------- -----GGYGCTGTCCATGGTGCTGAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 51 HNF4A Reverse Complement Reverse Complement Forward 1 13 3.56375 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: TGMYCTTTGBCCK-------- GGYGCTGTCCATGGTGCTGAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 64 PPARGRXRA Original Motif Original Motif Backward 3 13 3.56574 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: --------BTRGGDCARAGGKCA TTCAGCACCATGGACAGCKCC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 58 Motif name: Myc Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV ************************************************************************ Best Matches for Motif ID 58 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 56 Mycn Original Motif Original Motif Backward 1 10 0 Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD Alignment: HSCACGTGGC VGCACGTGGH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 68 sscCCCGCGcs Reverse Complement Original Motif Backward 1 10 0.064853 Consensus sequence (original motif): BSCCCCGCGBS Consensus sequence (reverse complement motif): SBCGCGGGGSB Alignment: BSCCCCGCGBS -DCCACGTGCV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 74 ssCCCCGCSssk Reverse Complement Original Motif Backward 2 10 0.0728588 Consensus sequence (original motif): SBCCCCGCCSBB Consensus sequence (reverse complement motif): BBSGGCGGGGBS Alignment: SBCCCCGCCSBB -DCCACGTGCV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 66 CTCF Reverse Complement Original Motif Backward 8 10 0.0754257 Consensus sequence (original motif): YDRCCASYAGRKGGCRSYV Consensus sequence (reverse complement motif): BMSMGCCYMCTKSTGGMHM Alignment: YDRCCASYAGRKGGCRSYV --DCCACGTGCV------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 47 Motif 47 Original Motif Reverse Complement Backward 4 10 0.0792377 Consensus sequence (original motif): YGCCACCTDSTGGY Consensus sequence (reverse complement motif): KCCASDAGGTGGCK Alignment: KCCASDAGGTGGCK -VGCACGTGGH--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Reverse Complement Original Motif Backward 6 10 0.0888909 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: CACTGTGRTRTCACAGTGSWSCACT ----------DCCACGTGCV----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 51 HNF4A Original Motif Reverse Complement Backward 1 10 0.0934488 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: TGMYCTTTGBCCK ---VGCACGTGGH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Reverse Complement Reverse Complement Forward 9 10 0.0940438 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV --------DCCACGTGCV-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 70 CagTGCTCCACTGTGgT Reverse Complement Reverse Complement Backward 7 10 0.0955234 Consensus sequence (original motif): CAGTGCTCCACTGTGBT Consensus sequence (reverse complement motif): ABCACAGTGGAGCACTG Alignment: ABCACAGTGGAGCACTG -DCCACGTGCV------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 ESR2 Original Motif Original Motif Forward 5 10 0.0968598 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: VHRGGTCABDBTGMCCTB ----VGCACGTGGH---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 59 Motif name: ESR2 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV ************************************************************************ Best Matches for Motif ID 59 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 93 TFM12 Original Motif Reverse Complement Forward 3 18 0.0691727 Consensus sequence (original motif): RAGKGMAGVRRGSRCASAGV Consensus sequence (reverse complement motif): VCTSTGKSCMKBCTRCYCTK Alignment: VCTSTGKSCMKBCTRCYCTK --VHRGGTCABDBTGMCCTB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Original Motif Reverse Complement Forward 7 18 0.0717757 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: CCACTGTGVTGTCACAGTGCTCCA ------VHRGGTCABDBTGMCCTB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Reverse Complement Forward 2 18 0.0815903 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: AGTGSWSCACTGTGAMAMCACAGTG -VHRGGTCABDBTGMCCTB------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Original Motif Reverse Complement Backward 3 18 0.0916961 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA -VHRGGTCABDBTGMCCTB-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Original Motif Original Motif Forward 4 17 0.511812 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY- ---VHRGGTCABDBTGMCCTB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 TgTGgTGTCACAGTGCTCC Original Motif Original Motif Forward 3 17 0.569595 Consensus sequence (original motif): TGTGGTGTCACAGTGCTCC Consensus sequence (reverse complement motif): GGAGCACTGTGACACCACA Alignment: TGTGGTGTCACAGTGCTCC- --VHRGGTCABDBTGMCCTB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 90 TFM2 Original Motif Reverse Complement Forward 2 17 0.583467 Consensus sequence (original motif): CHHCHBTCCTSCYTCTGC Consensus sequence (reverse complement motif): GCAGAKGSAGGABDGHDG Alignment: GCAGAKGSAGGABDGHDG- -VHRGGTCABDBTGMCCTB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 64 PPARGRXRA Original Motif Original Motif Forward 1 15 1.56699 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA--- VHRGGTCABDBTGMCCTB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 5 Motif 5 Original Motif Original Motif Forward 1 14 2.08635 Consensus sequence (original motif): CWGAGCCAYCTYTC Consensus sequence (reverse complement motif): GAKAGKTGGCTCWG Alignment: CWGAGCCAYCTYTC---- VHRGGTCABDBTGMCCTB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 52 NR2F1 Original Motif Original Motif Backward 1 14 2.08921 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: ----TGAMCTTTGMMCYT VHRGGTCABDBTGMCCTB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 60 Motif name: NR1H2RXRA Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT ************************************************************************ Best Matches for Motif ID 60 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Reverse Complement Reverse Complement Forward 4 17 0.0911991 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA ---GTTGACCTTTGACCTTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 64 PPARGRXRA Original Motif Original Motif Forward 1 15 1.05945 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA-- AAAGGTCAAAGGTCAAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 15 Motif 15 Original Motif Original Motif Forward 1 13 2.0701 Consensus sequence (original motif): AAAGRTMAAACTA Consensus sequence (reverse complement motif): TAGTTTYAKCTTT Alignment: AAAGRTMAAACTA---- AAAGGTCAAAGGTCAAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Original Motif Original Motif Backward 8 13 2.08514 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: ----VDBHMAGGTCACCCTGACCY AAAGGTCAAAGGTCAAC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 22 Motif 22 Original Motif Original Motif Backward 3 12 2.58792 Consensus sequence (original motif): TTTATGGTGAGCAT Consensus sequence (reverse complement motif): ATGCTCACCATAAA Alignment: -----TTTATGGTGAGCAT AAAGGTCAAAGGTCAAC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 93 TFM12 Original Motif Original Motif Forward 9 12 2.58894 Consensus sequence (original motif): RAGKGMAGVRRGSRCASAGV Consensus sequence (reverse complement motif): VCTSTGKSCMKBCTRCYCTK Alignment: RAGKGMAGVRRGSRCASAGV----- --------AAAGGTCAAAGGTCAAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 16 Motif 16 Original Motif Reverse Complement Backward 1 12 2.59792 Consensus sequence (original motif): TCTKTGTCAAWA Consensus sequence (reverse complement motif): TWTTGACAYAGA Alignment: -----TWTTGACAYAGA AAAGGTCAAAGGTCAAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 AgTGCTCCACTGTGgTGTCACAgT Original Motif Original Motif Forward 13 12 2.59961 Consensus sequence (original motif): AGTGCTCCACTGTGGTGTCACAGT Consensus sequence (reverse complement motif): ACTGTGACACCACAGTGGAGCACT Alignment: AGTGCTCCACTGTGGTGTCACAGT----- ------------AAAGGTCAAAGGTCAAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 71 AmTGTGACACCACAGT Original Motif Reverse Complement Forward 5 12 2.59967 Consensus sequence (original motif): AMTGTGACACCACAGT Consensus sequence (reverse complement motif): ACTGTGGTGTCACART Alignment: ACTGTGGTGTCACART----- ----AAAGGTCAAAGGTCAAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 18 Motif 18 Original Motif Original Motif Backward 1 11 3.05261 Consensus sequence (original motif): CAAAGTCCAGC Consensus sequence (reverse complement motif): GCTGGACTTTG Alignment: ------CAAAGTCCAGC AAAGGTCAAAGGTCAAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 61 Motif name: NR4A2 Consensus sequence (original motif): AAGGTCAC Consensus sequence (reverse complement motif): GTGACCTT ************************************************************************ Best Matches for Motif ID 61 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 60 NR1H2RXRA Original Motif Original Motif Backward 9 8 0.0167759 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC -AAGGTCAC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Original Motif Original Motif Forward 5 8 0.0195235 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY ----AAGGTCAC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 ESR2 Reverse Complement Reverse Complement Backward 2 8 0.0198372 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: BAGGYCABHBTGACCKHV ---------GTGACCTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 17 Motif 17 Reverse Complement Original Motif Forward 1 8 0.0393171 Consensus sequence (original motif): CTTCTGACCTC Consensus sequence (reverse complement motif): GAGGTCAGAAG Alignment: CTTCTGACCTC GTGACCTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 15 Motif 15 Original Motif Original Motif Forward 2 8 0.040519 Consensus sequence (original motif): AAAGRTMAAACTA Consensus sequence (reverse complement motif): TAGTTTYAKCTTT Alignment: AAAGRTMAAACTA -AAGGTCAC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 64 PPARGRXRA Original Motif Original Motif Backward 7 8 0.0495607 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA -AAGGTCAC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 24 Motif 24 Reverse Complement Reverse Complement Forward 4 8 0.0539119 Consensus sequence (original motif): AAAGWCATWAA Consensus sequence (reverse complement motif): TTWATGWCTTT Alignment: TTWATGWCTTT ---GTGACCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Original Motif Forward 7 8 0.0557243 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: CACTGTGRTRTCACAGTGSWSCACT ------AAGGTCAC----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 52 NR2F1 Original Motif Reverse Complement Forward 7 8 0.0564874 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: AKGYYCAAAGRTCA ------AAGGTCAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 35 Motif 35 Reverse Complement Original Motif Forward 2 8 0.0566591 Consensus sequence (original motif): AGATGYTCTTG Consensus sequence (reverse complement motif): CAAGAKCATCT Alignment: AGATGYTCTTG -GTGACCTT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 62 Motif name: RORA_1 Consensus sequence (original motif): AWVDAGGTCA Consensus sequence (reverse complement motif): TGACCTDVWT ************************************************************************ Best Matches for Motif ID 62 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 54 Esrrb Original Motif Original Motif Backward 1 10 0.053151 Consensus sequence (original motif): VBBYCAAGGTCA Consensus sequence (reverse complement motif): TGACCTTGMBBB Alignment: VBBYCAAGGTCA --AWVDAGGTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Reverse Complement Reverse Complement Backward 2 10 0.0655351 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV ---------TGACCTDVWT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 60 NR1H2RXRA Original Motif Original Motif Forward 6 10 0.078 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC -----AWVDAGGTCA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 52 NR2F1 Reverse Complement Original Motif Forward 5 10 0.0892308 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: TGAMCTTTGMMCYT ----TGACCTDVWT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 64 PPARGRXRA Original Motif Original Motif Backward 1 10 0.09043 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA -----AWVDAGGTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Original Motif Original Motif Forward 7 10 0.0993108 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC ------AWVDAGGTCA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 88 TFF11 Reverse Complement Original Motif Backward 1 10 0.103528 Consensus sequence (original motif): CTGCTGBDBBDGBD Consensus sequence (reverse complement motif): HVCDBBDBCAGCAG Alignment: CTGCTGBDBBDGBD ----TGACCTDVWT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 51 HNF4A Original Motif Original Motif Forward 4 10 0.10409 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: RGGBCAAAGKYCA ---AWVDAGGTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 93 TFM12 Original Motif Original Motif Backward 5 10 0.106859 Consensus sequence (original motif): RAGKGMAGVRRGSRCASAGV Consensus sequence (reverse complement motif): VCTSTGKSCMKBCTRCYCTK Alignment: RAGKGMAGVRRGSRCASAGV ------AWVDAGGTCA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 22 Motif 22 Reverse Complement Reverse Complement Forward 5 10 0.111 Consensus sequence (original motif): TTTATGGTGAGCAT Consensus sequence (reverse complement motif): ATGCTCACCATAAA Alignment: ATGCTCACCATAAA ----TGACCTDVWT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 63 Motif name: MIZF Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV ************************************************************************ Best Matches for Motif ID 63 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 18 Motif 18 Original Motif Original Motif Forward 1 10 0.0591071 Consensus sequence (original motif): CAAAGTCCAGC Consensus sequence (reverse complement motif): GCTGGACTTTG Alignment: CAAAGTCCAGC BAACGTCCGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 ESR2 Reverse Complement Reverse Complement Backward 1 10 0.0605777 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: BAGGYCABHBTGACCKHV --------GCGGACGTTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Original Motif Original Motif Backward 8 10 0.0614567 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY ---BAACGTCCGC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 60 NR1H2RXRA Original Motif Original Motif Backward 1 10 0.0646071 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC -------BAACGTCCGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 82 gCGCGCsCgsG Original Motif Original Motif Forward 1 10 0.0651598 Consensus sequence (original motif): GCGCGCSCGCG Consensus sequence (reverse complement motif): CGCGSGCGCGC Alignment: GCGCGCSCGCG BAACGTCCGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 66 CTCF Original Motif Reverse Complement Backward 10 10 0.0697767 Consensus sequence (original motif): YDRCCASYAGRKGGCRSYV Consensus sequence (reverse complement motif): BMSMGCCYMCTKSTGGMHM Alignment: BMSMGCCYMCTKSTGGMHM BAACGTCCGC--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Original Motif Reverse Complement Backward 3 10 0.0708149 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA ---------BAACGTCCGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 88 TFF11 Reverse Complement Original Motif Forward 3 10 0.0753571 Consensus sequence (original motif): CTGCTGBDBBDGBD Consensus sequence (reverse complement motif): HVCDBBDBCAGCAG Alignment: CTGCTGBDBBDGBD --GCGGACGTTV-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 93 TFM12 Original Motif Reverse Complement Forward 7 10 0.0780684 Consensus sequence (original motif): RAGKGMAGVRRGSRCASAGV Consensus sequence (reverse complement motif): VCTSTGKSCMKBCTRCYCTK Alignment: VCTSTGKSCMKBCTRCYCTK ------BAACGTCCGC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 1 Motif 1 Original Motif Original Motif Forward 2 10 0.0797585 Consensus sequence (original motif): CYTSCCTCTGC Consensus sequence (reverse complement motif): GCAGAGGSAKG Alignment: CYTSCCTCTGC -BAACGTCCGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 64 Motif name: PPARGRXRA Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB ************************************************************************ Best Matches for Motif ID 64 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 60 NR1H2RXRA Original Motif Original Motif Backward 3 15 0.0442974 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC BTRGGDCARAGGKCA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 ESR2 Original Motif Original Motif Backward 4 15 0.0602408 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: VHRGGTCABDBTGMCCTB BTRGGDCARAGGKCA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 93 TFM12 Original Motif Original Motif Backward 5 15 0.0615418 Consensus sequence (original motif): RAGKGMAGVRRGSRCASAGV Consensus sequence (reverse complement motif): VCTSTGKSCMKBCTRCYCTK Alignment: RAGKGMAGVRRGSRCASAGV -BTRGGDCARAGGKCA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Original Motif Original Motif Backward 3 15 0.0723092 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY ---BTRGGDCARAGGKCA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Original Motif Forward 6 15 0.0741352 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: CACTGTGRTRTCACAGTGSWSCACT -----BTRGGDCARAGGKCA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 66 CTCF Original Motif Original Motif Forward 2 15 0.0786357 Consensus sequence (original motif): YDRCCASYAGRKGGCRSYV Consensus sequence (reverse complement motif): BMSMGCCYMCTKSTGGMHM Alignment: YDRCCASYAGRKGGCRSYV -BTRGGDCARAGGKCA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 90 TFM2 Reverse Complement Original Motif Backward 4 15 0.0790185 Consensus sequence (original motif): CHHCHBTCCTSCYTCTGC Consensus sequence (reverse complement motif): GCAGAKGSAGGABDGHDG Alignment: CHHCHBTCCTSCYTCTGC TGRCCTKTGHCCKAB--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Original Motif Original Motif Forward 2 15 0.0796159 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC -BTRGGDCARAGGKCA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Original Motif Reverse Complement Forward 7 15 0.0813414 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: CCACTGTGVTGTCACAGTGCTCCA ------BTRGGDCARAGGKCA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 TgTGgTGTCACAGTGCTCC Original Motif Original Motif Forward 3 15 0.0818655 Consensus sequence (original motif): TGTGGTGTCACAGTGCTCC Consensus sequence (reverse complement motif): GGAGCACTGTGACACCACA Alignment: TGTGGTGTCACAGTGCTCC --BTRGGDCARAGGKCA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 65 Motif name: Tcfcp2l1 Consensus sequence (original motif): CCAGYYHVADCCRG Consensus sequence (reverse complement motif): CKGGDTBDMMCTGG ************************************************************************ Best Matches for Motif ID 65 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Original Motif Reverse Complement Forward 4 14 0.0453398 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV ---CCAGYYHVADCCRG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 66 CTCF Original Motif Original Motif Forward 4 14 0.0491111 Consensus sequence (original motif): YDRCCASYAGRKGGCRSYV Consensus sequence (reverse complement motif): BMSMGCCYMCTKSTGGMHM Alignment: YDRCCASYAGRKGGCRSYV ---CCAGYYHVADCCRG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 93 TFM12 Original Motif Reverse Complement Forward 2 14 0.0502168 Consensus sequence (original motif): RAGKGMAGVRRGSRCASAGV Consensus sequence (reverse complement motif): VCTSTGKSCMKBCTRCYCTK Alignment: VCTSTGKSCMKBCTRCYCTK -CCAGYYHVADCCRG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 90 TFM2 Reverse Complement Reverse Complement Backward 1 14 0.0514558 Consensus sequence (original motif): CHHCHBTCCTSCYTCTGC Consensus sequence (reverse complement motif): GCAGAKGSAGGABDGHDG Alignment: GCAGAKGSAGGABDGHDG ----CKGGDTBDMMCTGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 88 TFF11 Original Motif Reverse Complement Backward 1 14 0.0546308 Consensus sequence (original motif): CTGCTGBDBBDGBD Consensus sequence (reverse complement motif): HVCDBBDBCAGCAG Alignment: HVCDBBDBCAGCAG CCAGYYHVADCCRG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 ESR2 Reverse Complement Original Motif Backward 1 14 0.0568174 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: VHRGGTCABDBTGMCCTB ----CKGGDTBDMMCTGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 64 PPARGRXRA Reverse Complement Reverse Complement Backward 1 14 0.0569399 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: TGRCCTKTGHCCKAB -CKGGDTBDMMCTGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 3 Motif 3 Reverse Complement Reverse Complement Forward 1 13 0.542892 Consensus sequence (original motif): HCAGRRVACASAG Consensus sequence (reverse complement motif): CTSTGTBKMCTGH Alignment: CTSTGTBKMCTGH- CKGGDTBDMMCTGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 5 Motif 5 Reverse Complement Reverse Complement Forward 2 13 0.546848 Consensus sequence (original motif): CWGAGCCAYCTYTC Consensus sequence (reverse complement motif): GAKAGKTGGCTCWG Alignment: GAKAGKTGGCTCWG- -CKGGDTBDMMCTGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 70 CagTGCTCCACTGTGgT Reverse Complement Reverse Complement Forward 5 13 0.551995 Consensus sequence (original motif): CAGTGCTCCACTGTGBT Consensus sequence (reverse complement motif): ABCACAGTGGAGCACTG Alignment: ABCACAGTGGAGCACTG- ----CKGGDTBDMMCTGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 66 Motif name: CTCF Consensus sequence (original motif): YDRCCASYAGRKGGCRSYV Consensus sequence (reverse complement motif): BMSMGCCYMCTKSTGGMHM ************************************************************************ Best Matches for Motif ID 66 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 93 TFM12 Reverse Complement Reverse Complement Forward 1 19 0.066318 Consensus sequence (original motif): RAGKGMAGVRRGSRCASAGV Consensus sequence (reverse complement motif): VCTSTGKSCMKBCTRCYCTK Alignment: VCTSTGKSCMKBCTRCYCTK BMSMGCCYMCTKSTGGMHM- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Original Motif Reverse Complement Forward 2 19 0.0687764 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV -YDRCCASYAGRKGGCRSYV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 AgTGCTCCACTGTGgTGTCACAgT Original Motif Reverse Complement Forward 7 18 0.566688 Consensus sequence (original motif): AGTGCTCCACTGTGGTGTCACAGT Consensus sequence (reverse complement motif): ACTGTGACACCACAGTGGAGCACT Alignment: ACTGTGACACCACAGTGGAGCACT- ------YDRCCASYAGRKGGCRSYV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Reverse Complement Reverse Complement Backward 8 18 0.56949 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: -AGTGSWSCACTGTGAMAMCACAGTG BMSMGCCYMCTKSTGGMHM------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 90 TFM2 Reverse Complement Original Motif Backward 1 18 0.571172 Consensus sequence (original motif): CHHCHBTCCTSCYTCTGC Consensus sequence (reverse complement motif): GCAGAKGSAGGABDGHDG Alignment: -CHHCHBTCCTSCYTCTGC BMSMGCCYMCTKSTGGMHM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 70 CagTGCTCCACTGTGgT Original Motif Reverse Complement Backward 1 17 1.05559 Consensus sequence (original motif): CAGTGCTCCACTGTGBT Consensus sequence (reverse complement motif): ABCACAGTGGAGCACTG Alignment: --ABCACAGTGGAGCACTG YDRCCASYAGRKGGCRSYV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 76 CAcCACAGTGGAGCAct Original Motif Original Motif Backward 3 15 2.06507 Consensus sequence (original motif): CAHCACAGTGGAGCACT Consensus sequence (reverse complement motif): AGTGCTCCACTGTGDTG Alignment: ----CAHCACAGTGGAGCACT YDRCCASYAGRKGGCRSYV-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Original Motif Original Motif Forward 10 15 2.07021 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: TGGAGCACTGTGACAVCACAGTGG---- ---------YDRCCASYAGRKGGCRSYV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 5 Motif 5 Reverse Complement Original Motif Backward 1 14 2.54791 Consensus sequence (original motif): CWGAGCCAYCTYTC Consensus sequence (reverse complement motif): GAKAGKTGGCTCWG Alignment: -----CWGAGCCAYCTYTC BMSMGCCYMCTKSTGGMHM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 47 Motif 47 Original Motif Reverse Complement Forward 1 14 2.56483 Consensus sequence (original motif): YGCCACCTDSTGGY Consensus sequence (reverse complement motif): KCCASDAGGTGGCK Alignment: KCCASDAGGTGGCK----- YDRCCASYAGRKGGCRSYV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 67 Motif name: TgTGgTGTCACAGTGCTCC Consensus sequence (original motif): TGTGGTGTCACAGTGCTCC Consensus sequence (reverse complement motif): GGAGCACTGTGACACCACA ************************************************************************ Best Matches for Motif ID 67 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Original Motif Reverse Complement Forward 5 19 0 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: CCACTGTGVTGTCACAGTGCTCCA ----TGTGGTGTCACAGTGCTCC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Reverse Complement Reverse Complement Forward 4 19 0.0217259 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: AGTGSWSCACTGTGAMAMCACAGTG ---GGAGCACTGTGACACCACA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 AgTGCTCCACTGTGgTGTCACAgT Original Motif Reverse Complement Backward 4 19 0.074816 Consensus sequence (original motif): AGTGCTCCACTGTGGTGTCACAGT Consensus sequence (reverse complement motif): ACTGTGACACCACAGTGGAGCACT Alignment: ACTGTGACACCACAGTGGAGCACT --TGTGGTGTCACAGTGCTCC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Original Motif Original Motif Backward 1 19 0.0857262 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY -TGTGGTGTCACAGTGCTCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 93 TFM12 Reverse Complement Original Motif Backward 3 18 0.595281 Consensus sequence (original motif): RAGKGMAGVRRGSRCASAGV Consensus sequence (reverse complement motif): VCTSTGKSCMKBCTRCYCTK Alignment: -RAGKGMAGVRRGSRCASAGV GGAGCACTGTGACACCACA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 ESR2 Original Motif Original Motif Backward 2 17 1.08001 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: --VHRGGTCABDBTGMCCTB TGTGGTGTCACAGTGCTCC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 70 CagTGCTCCACTGTGgT Original Motif Original Motif Forward 1 17 1.08847 Consensus sequence (original motif): CAGTGCTCCACTGTGBT Consensus sequence (reverse complement motif): ABCACAGTGGAGCACTG Alignment: CAGTGCTCCACTGTGBT-- TGTGGTGTCACAGTGCTCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 71 AmTGTGACACCACAGT Reverse Complement Reverse Complement Forward 1 16 1.59452 Consensus sequence (original motif): AMTGTGACACCACAGT Consensus sequence (reverse complement motif): ACTGTGGTGTCACART Alignment: ACTGTGGTGTCACART--- GGAGCACTGTGACACCACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 92 TFM11 Original Motif Reverse Complement Backward 5 16 1.60014 Consensus sequence (original motif): CAMACACACACAYDCACACA Consensus sequence (reverse complement motif): TGTGTGDKTGTGTGTGTRTG Alignment: ---TGTGTGDKTGTGTGTGTRTG TGTGGTGTCACAGTGCTCC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 89 TFM1 Original Motif Reverse Complement Backward 3 16 1.60282 Consensus sequence (original motif): CACACACACACWCACACA Consensus sequence (reverse complement motif): TGTGTGWGTGTGTGTGTG Alignment: ---TGTGTGWGTGTGTGTGTG TGTGGTGTCACAGTGCTCC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 68 Motif name: sscCCCGCGcs Consensus sequence (original motif): BSCCCCGCGBS Consensus sequence (reverse complement motif): SBCGCGGGGSB ************************************************************************ Best Matches for Motif ID 68 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 74 ssCCCCGCSssk Original Motif Original Motif Forward 1 11 0 Consensus sequence (original motif): SBCCCCGCCSBB Consensus sequence (reverse complement motif): BBSGGCGGGGBS Alignment: SBCCCCGCCSBB BSCCCCGCGBS- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 82 gCGCGCsCgsG Reverse Complement Reverse Complement Forward 1 11 0.0417227 Consensus sequence (original motif): GCGCGCSCGCG Consensus sequence (reverse complement motif): CGCGSGCGCGC Alignment: CGCGSGCGCGC SBCGCGGGGSB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 78 ssGCkTGCssk Original Motif Original Motif Forward 1 11 0.0523123 Consensus sequence (original motif): SSGCKTGCSSK Consensus sequence (reverse complement motif): YSSGCAYGCSS Alignment: SSGCKTGCSSK BSCCCCGCGBS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 66 CTCF Reverse Complement Original Motif Backward 7 11 0.0564004 Consensus sequence (original motif): YDRCCASYAGRKGGCRSYV Consensus sequence (reverse complement motif): BMSMGCCYMCTKSTGGMHM Alignment: YDRCCASYAGRKGGCRSYV --SBCGCGGGGSB------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 90 TFM2 Original Motif Original Motif Backward 4 11 0.0666605 Consensus sequence (original motif): CHHCHBTCCTSCYTCTGC Consensus sequence (reverse complement motif): GCAGAKGSAGGABDGHDG Alignment: CHHCHBTCCTSCYTCTGC ----BSCCCCGCGBS--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 93 TFM12 Reverse Complement Original Motif Backward 6 11 0.0677432 Consensus sequence (original motif): RAGKGMAGVRRGSRCASAGV Consensus sequence (reverse complement motif): VCTSTGKSCMKBCTRCYCTK Alignment: RAGKGMAGVRRGSRCASAGV ----SBCGCGGGGSB----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Original Motif Reverse Complement Forward 1 11 0.0734979 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV BSCCCCGCGBS--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 79 cCGCGGrCACG Original Motif Original Motif Forward 1 11 0.0757081 Consensus sequence (original motif): CCGCGGRCACG Consensus sequence (reverse complement motif): CGTGKCCGCGG Alignment: CCGCGGRCACG BSCCCCGCGBS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Reverse Complement Reverse Complement Forward 1 11 0.0758097 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA SBCGCGGGGSB---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 1 Motif 1 Reverse Complement Reverse Complement Backward 1 11 0.0788714 Consensus sequence (original motif): CYTSCCTCTGC Consensus sequence (reverse complement motif): GCAGAGGSAKG Alignment: GCAGAGGSAKG SBCGCGGGGSB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 69 Motif name: atactttggc Consensus sequence (original motif): ATACTTTGGC Consensus sequence (reverse complement motif): GCCAAAGTAT ************************************************************************ Best Matches for Motif ID 69 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 75 wwCCAmAGTCmt Reverse Complement Original Motif Backward 2 10 0.0840909 Consensus sequence (original motif): DDCCAMAGTCHB Consensus sequence (reverse complement motif): VDGACTRTGGDD Alignment: DDCCAMAGTCHB -GCCAAAGTAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 80 taaacgatgcc Reverse Complement Reverse Complement Backward 2 10 0.1 Consensus sequence (original motif): TAAACGATGCC Consensus sequence (reverse complement motif): GGCATCGTTTA Alignment: GGCATCGTTTA GCCAAAGTAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 60 NR1H2RXRA Reverse Complement Original Motif Backward 5 10 0.102 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC ---GCCAAAGTAT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 TgTGgTGTCACAGTGCTCC Original Motif Reverse Complement Backward 4 10 0.109722 Consensus sequence (original motif): TGTGGTGTCACAGTGCTCC Consensus sequence (reverse complement motif): GGAGCACTGTGACACCACA Alignment: GGAGCACTGTGACACCACA ------ATACTTTGGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Reverse Complement Original Motif Backward 7 10 0.109921 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: CACTGTGRTRTCACAGTGSWSCACT ---------GCCAAAGTAT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 51 HNF4A Original Motif Reverse Complement Forward 3 10 0.110821 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: TGMYCTTTGBCCK --ATACTTTGGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 52 NR2F1 Original Motif Original Motif Forward 2 10 0.111538 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: TGAMCTTTGMMCYT -ATACTTTGGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Reverse Complement Reverse Complement Backward 5 10 0.111824 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: CCACTGTGVTGTCACAGTGCTCCA ----------GCCAAAGTAT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 AgTGCTCCACTGTGgTGTCACAgT Reverse Complement Reverse Complement Forward 9 10 0.112324 Consensus sequence (original motif): AGTGCTCCACTGTGGTGTCACAGT Consensus sequence (reverse complement motif): ACTGTGACACCACAGTGGAGCACT Alignment: ACTGTGACACCACAGTGGAGCACT --------GCCAAAGTAT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 46 Motif 46 Original Motif Reverse Complement Backward 2 10 0.1125 Consensus sequence (original motif): ATAGGTTTAGYATA Consensus sequence (reverse complement motif): TATKCTAAACCTAT Alignment: TATKCTAAACCTAT ---ATACTTTGGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 70 Motif name: CagTGCTCCACTGTGgT Consensus sequence (original motif): CAGTGCTCCACTGTGBT Consensus sequence (reverse complement motif): ABCACAGTGGAGCACTG ************************************************************************ Best Matches for Motif ID 70 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 66 CTCF Original Motif Reverse Complement Backward 1 17 0.0957051 Consensus sequence (original motif): YDRCCASYAGRKGGCRSYV Consensus sequence (reverse complement motif): BMSMGCCYMCTKSTGGMHM Alignment: BMSMGCCYMCTKSTGGMHM --CAGTGCTCCACTGTGBT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Reverse Complement Original Motif Forward 2 17 0.0975871 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC -ABCACAGTGGAGCACTG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 TgTGgTGTCACAGTGCTCC Original Motif Original Motif Backward 3 17 0.0980868 Consensus sequence (original motif): TGTGGTGTCACAGTGCTCC Consensus sequence (reverse complement motif): GGAGCACTGTGACACCACA Alignment: TGTGGTGTCACAGTGCTCC CAGTGCTCCACTGTGBT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 AgTGCTCCACTGTGgTGTCACAgT Reverse Complement Original Motif Backward 3 17 0.099784 Consensus sequence (original motif): AGTGCTCCACTGTGGTGTCACAGT Consensus sequence (reverse complement motif): ACTGTGACACCACAGTGGAGCACT Alignment: AGTGCTCCACTGTGGTGTCACAGT -----ABCACAGTGGAGCACTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Reverse Complement Reverse Complement Forward 6 17 0.104226 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: AGTGSWSCACTGTGAMAMCACAGTG -----ABCACAGTGGAGCACTG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Reverse Complement Original Motif Backward 5 17 0.107548 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: TGGAGCACTGTGACAVCACAGTGG ---ABCACAGTGGAGCACTG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 76 CAcCACAGTGGAGCAct Original Motif Reverse Complement Backward 2 16 0.5 Consensus sequence (original motif): CAHCACAGTGGAGCACT Consensus sequence (reverse complement motif): AGTGCTCCACTGTGDTG Alignment: -AGTGCTCCACTGTGDTG CAGTGCTCCACTGTGBT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 71 AmTGTGACACCACAGT Original Motif Original Motif Backward 1 16 0.607943 Consensus sequence (original motif): AMTGTGACACCACAGT Consensus sequence (reverse complement motif): ACTGTGGTGTCACART Alignment: -AMTGTGACACCACAGT CAGTGCTCCACTGTGBT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 47 Motif 47 Original Motif Original Motif Backward 1 14 1.59821 Consensus sequence (original motif): YGCCACCTDSTGGY Consensus sequence (reverse complement motif): KCCASDAGGTGGCK Alignment: ---YGCCACCTDSTGGY CAGTGCTCCACTGTGBT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 93 TFM12 Original Motif Reverse Complement Forward 8 13 2.09999 Consensus sequence (original motif): RAGKGMAGVRRGSRCASAGV Consensus sequence (reverse complement motif): VCTSTGKSCMKBCTRCYCTK Alignment: VCTSTGKSCMKBCTRCYCTK---- -------CAGTGCTCCACTGTGBT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 71 Motif name: AmTGTGACACCACAGT Consensus sequence (original motif): AMTGTGACACCACAGT Consensus sequence (reverse complement motif): ACTGTGGTGTCACART ************************************************************************ Best Matches for Motif ID 71 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 AgTGCTCCACTGTGgTGTCACAgT Original Motif Reverse Complement Forward 1 16 0.00066365 Consensus sequence (original motif): AGTGCTCCACTGTGGTGTCACAGT Consensus sequence (reverse complement motif): ACTGTGACACCACAGTGGAGCACT Alignment: ACTGTGACACCACAGTGGAGCACT AMTGTGACACCACAGT-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Reverse Complement Reverse Complement Forward 3 16 0.00238202 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: CCACTGTGVTGTCACAGTGCTCCA --ACTGTGGTGTCACART------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Reverse Complement Original Motif Forward 2 16 0.0203916 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: CACTGTGRTRTCACAGTGSWSCACT -ACTGTGGTGTCACART-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 TgTGgTGTCACAGTGCTCC Reverse Complement Reverse Complement Backward 4 16 0.0957574 Consensus sequence (original motif): TGTGGTGTCACAGTGCTCC Consensus sequence (reverse complement motif): GGAGCACTGTGACACCACA Alignment: GGAGCACTGTGACACCACA ACTGTGGTGTCACART--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 70 CagTGCTCCACTGTGgT Original Motif Original Motif Backward 1 16 0.0995605 Consensus sequence (original motif): CAGTGCTCCACTGTGBT Consensus sequence (reverse complement motif): ABCACAGTGGAGCACTG Alignment: CAGTGCTCCACTGTGBT -AMTGTGACACCACAGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 93 TFM12 Original Motif Original Motif Forward 5 16 0.10061 Consensus sequence (original motif): RAGKGMAGVRRGSRCASAGV Consensus sequence (reverse complement motif): VCTSTGKSCMKBCTRCYCTK Alignment: RAGKGMAGVRRGSRCASAGV ----AMTGTGACACCACAGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 76 CAcCACAGTGGAGCAct Original Motif Reverse Complement Backward 2 16 0.102539 Consensus sequence (original motif): CAHCACAGTGGAGCACT Consensus sequence (reverse complement motif): AGTGCTCCACTGTGDTG Alignment: AGTGCTCCACTGTGDTG AMTGTGACACCACAGT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Original Motif Reverse Complement Backward 6 15 0.595756 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: -MGGTCAGGGTGACCTRDBHV AMTGTGACACCACAGT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Reverse Complement Reverse Complement Backward 8 14 1.10257 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: --GGYGCTGTCCATGGTGCTGAA ACTGTGGTGTCACART------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 88 TFF11 Original Motif Reverse Complement Forward 2 13 1.59198 Consensus sequence (original motif): CTGCTGBDBBDGBD Consensus sequence (reverse complement motif): HVCDBBDBCAGCAG Alignment: HVCDBBDBCAGCAG--- -AMTGTGACACCACAGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 72 Motif name: CACTGTGrYrtCACAGTGswsCAcT Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG ************************************************************************ Best Matches for Motif ID 72 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 AgTGCTCCACTGTGgTGTCACAgT Original Motif Reverse Complement Backward 1 24 0.0299166 Consensus sequence (original motif): AGTGCTCCACTGTGGTGTCACAGT Consensus sequence (reverse complement motif): ACTGTGACACCACAGTGGAGCACT Alignment: -ACTGTGACACCACAGTGGAGCACT CACTGTGRTRTCACAGTGSWSCACT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Reverse Complement Original Motif Backward 2 23 0.506166 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: --TGGAGCACTGTGACAVCACAGTGG AGTGSWSCACTGTGAMAMCACAGTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 93 TFM12 Reverse Complement Original Motif Forward 2 19 2.59185 Consensus sequence (original motif): RAGKGMAGVRRGSRCASAGV Consensus sequence (reverse complement motif): VCTSTGKSCMKBCTRCYCTK Alignment: RAGKGMAGVRRGSRCASAGV------ -AGTGSWSCACTGTGAMAMCACAGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Original Motif Reverse Complement Forward 3 18 3.08766 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV------- --CACTGTGRTRTCACAGTGSWSCACT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 66 CTCF Reverse Complement Reverse Complement Forward 2 18 3.09362 Consensus sequence (original motif): YDRCCASYAGRKGGCRSYV Consensus sequence (reverse complement motif): BMSMGCCYMCTKSTGGMHM Alignment: BMSMGCCYMCTKSTGGMHM------- -AGTGSWSCACTGTGAMAMCACAGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 TgTGgTGTCACAGTGCTCC Original Motif Reverse Complement Forward 2 18 3.09504 Consensus sequence (original motif): TGTGGTGTCACAGTGCTCC Consensus sequence (reverse complement motif): GGAGCACTGTGACACCACA Alignment: GGAGCACTGTGACACCACA------- -CACTGTGRTRTCACAGTGSWSCACT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 76 CAcCACAGTGGAGCAct Original Motif Original Motif Backward 1 17 3.52969 Consensus sequence (original motif): CAHCACAGTGGAGCACT Consensus sequence (reverse complement motif): AGTGCTCCACTGTGDTG Alignment: --------CAHCACAGTGGAGCACT CACTGTGRTRTCACAGTGSWSCACT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 70 CagTGCTCCACTGTGgT Reverse Complement Original Motif Backward 2 16 4.02785 Consensus sequence (original motif): CAGTGCTCCACTGTGBT Consensus sequence (reverse complement motif): ABCACAGTGGAGCACTG Alignment: ---------CAGTGCTCCACTGTGBT AGTGSWSCACTGTGAMAMCACAGTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 90 TFM2 Original Motif Original Motif Backward 4 15 4.59058 Consensus sequence (original motif): CHHCHBTCCTSCYTCTGC Consensus sequence (reverse complement motif): GCAGAKGSAGGABDGHDG Alignment: ----------CHHCHBTCCTSCYTCTGC CACTGTGRTRTCACAGTGSWSCACT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 ESR2 Reverse Complement Original Motif Forward 6 13 5.58821 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: VHRGGTCABDBTGMCCTB------------ -----AGTGSWSCACTGTGAMAMCACAGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 73 Motif name: TGGAGCACTGTGACAcCACAGTGg Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA ************************************************************************ Best Matches for Motif ID 73 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Reverse Complement Original Motif Forward 3 23 0.0136536 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: CACTGTGRTRTCACAGTGSWSCACT- --CCACTGTGVTGTCACAGTGCTCCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 AgTGCTCCACTGTGgTGTCACAgT Reverse Complement Reverse Complement Backward 3 22 0.560082 Consensus sequence (original motif): AGTGCTCCACTGTGGTGTCACAGT Consensus sequence (reverse complement motif): ACTGTGACACCACAGTGGAGCACT Alignment: --ACTGTGACACCACAGTGGAGCACT CCACTGTGVTGTCACAGTGCTCCA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 ESR2 Original Motif Reverse Complement Backward 1 18 2.5833 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: ------BAGGYCABHBTGACCKHV TGGAGCACTGTGACAVCACAGTGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 90 TFM2 Reverse Complement Original Motif Forward 1 18 2.60363 Consensus sequence (original motif): CHHCHBTCCTSCYTCTGC Consensus sequence (reverse complement motif): GCAGAKGSAGGABDGHDG Alignment: CHHCHBTCCTSCYTCTGC------ CCACTGTGVTGTCACAGTGCTCCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Reverse Complement Reverse Complement Forward 4 17 3.10239 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV------- ---CCACTGTGVTGTCACAGTGCTCCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 93 TFM12 Original Motif Original Motif Forward 4 17 3.10268 Consensus sequence (original motif): RAGKGMAGVRRGSRCASAGV Consensus sequence (reverse complement motif): VCTSTGKSCMKBCTRCYCTK Alignment: RAGKGMAGVRRGSRCASAGV------- ---TGGAGCACTGTGACAVCACAGTGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 TgTGgTGTCACAGTGCTCC Reverse Complement Reverse Complement Forward 4 16 3.56015 Consensus sequence (original motif): TGTGGTGTCACAGTGCTCC Consensus sequence (reverse complement motif): GGAGCACTGTGACACCACA Alignment: GGAGCACTGTGACACCACA-------- ---CCACTGTGVTGTCACAGTGCTCCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 70 CagTGCTCCACTGTGgT Reverse Complement Reverse Complement Forward 2 16 3.58845 Consensus sequence (original motif): CAGTGCTCCACTGTGBT Consensus sequence (reverse complement motif): ABCACAGTGGAGCACTG Alignment: ABCACAGTGGAGCACTG-------- -CCACTGTGVTGTCACAGTGCTCCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 76 CAcCACAGTGGAGCAct Original Motif Reverse Complement Forward 3 15 4.07113 Consensus sequence (original motif): CAHCACAGTGGAGCACT Consensus sequence (reverse complement motif): AGTGCTCCACTGTGDTG Alignment: AGTGCTCCACTGTGDTG--------- --TGGAGCACTGTGACAVCACAGTGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 66 CTCF Original Motif Original Motif Backward 5 15 4.10183 Consensus sequence (original motif): YDRCCASYAGRKGGCRSYV Consensus sequence (reverse complement motif): BMSMGCCYMCTKSTGGMHM Alignment: ---------YDRCCASYAGRKGGCRSYV TGGAGCACTGTGACAVCACAGTGG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 74 Motif name: ssCCCCGCSssk Consensus sequence (original motif): SBCCCCGCCSBB Consensus sequence (reverse complement motif): BBSGGCGGGGBS ************************************************************************ Best Matches for Motif ID 74 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 90 TFM2 Original Motif Original Motif Backward 3 12 0.0606622 Consensus sequence (original motif): CHHCHBTCCTSCYTCTGC Consensus sequence (reverse complement motif): GCAGAKGSAGGABDGHDG Alignment: CHHCHBTCCTSCYTCTGC ----SBCCCCGCCSBB-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Reverse Complement Reverse Complement Backward 2 12 0.063076 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV -------BBSGGCGGGGBS- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 66 CTCF Reverse Complement Original Motif Forward 2 12 0.0642087 Consensus sequence (original motif): YDRCCASYAGRKGGCRSYV Consensus sequence (reverse complement motif): BMSMGCCYMCTKSTGGMHM Alignment: YDRCCASYAGRKGGCRSYV -BBSGGCGGGGBS------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 64 PPARGRXRA Original Motif Reverse Complement Backward 3 12 0.0671548 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: TGRCCTKTGHCCKAB -SBCCCCGCCSBB-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 93 TFM12 Reverse Complement Original Motif Backward 6 12 0.0674545 Consensus sequence (original motif): RAGKGMAGVRRGSRCASAGV Consensus sequence (reverse complement motif): VCTSTGKSCMKBCTRCYCTK Alignment: RAGKGMAGVRRGSRCASAGV ---BBSGGCGGGGBS----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 ESR2 Original Motif Reverse Complement Forward 2 12 0.0734481 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: BAGGYCABHBTGACCKHV -SBCCCCGCCSBB----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Reverse Complement Original Motif Backward 10 12 0.0751084 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC BBSGGCGGGGBS--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 47 Motif 47 Original Motif Original Motif Forward 1 12 0.078885 Consensus sequence (original motif): YGCCACCTDSTGGY Consensus sequence (reverse complement motif): KCCASDAGGTGGCK Alignment: YGCCACCTDSTGGY SBCCCCGCCSBB-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 68 sscCCCGCGcs Original Motif Original Motif Forward 1 11 0.5 Consensus sequence (original motif): BSCCCCGCGBS Consensus sequence (reverse complement motif): SBCGCGGGGSB Alignment: BSCCCCGCGBS- SBCCCCGCCSBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 82 gCGCGCsCgsG Reverse Complement Reverse Complement Backward 1 11 0.548902 Consensus sequence (original motif): GCGCGCSCGCG Consensus sequence (reverse complement motif): CGCGSGCGCGC Alignment: -CGCGSGCGCGC BBSGGCGGGGBS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 75 Motif name: wwCCAmAGTCmt Consensus sequence (original motif): DDCCAMAGTCHB Consensus sequence (reverse complement motif): VDGACTRTGGDD ************************************************************************ Best Matches for Motif ID 75 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Original Motif Forward 9 12 0.0656866 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: CACTGTGRTRTCACAGTGSWSCACT --------DDCCAMAGTCHB----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 70 CagTGCTCCACTGTGgT Reverse Complement Reverse Complement Backward 6 12 0.0676046 Consensus sequence (original motif): CAGTGCTCCACTGTGBT Consensus sequence (reverse complement motif): ABCACAGTGGAGCACTG Alignment: ABCACAGTGGAGCACTG VDGACTRTGGDD----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 76 CAcCACAGTGGAGCAct Reverse Complement Reverse Complement Forward 6 12 0.0684312 Consensus sequence (original motif): CAHCACAGTGGAGCACT Consensus sequence (reverse complement motif): AGTGCTCCACTGTGDTG Alignment: AGTGCTCCACTGTGDTG -----VDGACTRTGGDD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 AgTGCTCCACTGTGgTGTCACAgT Reverse Complement Original Motif Forward 6 12 0.0695137 Consensus sequence (original motif): AGTGCTCCACTGTGGTGTCACAGT Consensus sequence (reverse complement motif): ACTGTGACACCACAGTGGAGCACT Alignment: AGTGCTCCACTGTGGTGTCACAGT -----VDGACTRTGGDD------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 51 HNF4A Original Motif Original Motif Forward 2 12 0.0717637 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: RGGBCAAAGKYCA -DDCCAMAGTCHB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 92 TFM11 Original Motif Original Motif Backward 8 12 0.0751124 Consensus sequence (original motif): CAMACACACACAYDCACACA Consensus sequence (reverse complement motif): TGTGTGDKTGTGTGTGTRTG Alignment: CAMACACACACAYDCACACA -DDCCAMAGTCHB------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Original Motif Reverse Complement Forward 4 12 0.075392 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: CCACTGTGVTGTCACAGTGCTCCA ---DDCCAMAGTCHB--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Original Motif Reverse Complement Forward 4 12 0.0784446 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA ---DDCCAMAGTCHB------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 TgTGgTGTCACAGTGCTCC Original Motif Original Motif Backward 3 12 0.0786999 Consensus sequence (original motif): TGTGGTGTCACAGTGCTCC Consensus sequence (reverse complement motif): GGAGCACTGTGACACCACA Alignment: TGTGGTGTCACAGTGCTCC -----DDCCAMAGTCHB-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Original Motif Original Motif Forward 1 12 0.0800522 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY DDCCAMAGTCHB-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 76 Motif name: CAcCACAGTGGAGCAct Consensus sequence (original motif): CAHCACAGTGGAGCACT Consensus sequence (reverse complement motif): AGTGCTCCACTGTGDTG ************************************************************************ Best Matches for Motif ID 76 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 AgTGCTCCACTGTGgTGTCACAgT Original Motif Reverse Complement Forward 8 17 0.00742502 Consensus sequence (original motif): AGTGCTCCACTGTGGTGTCACAGT Consensus sequence (reverse complement motif): ACTGTGACACCACAGTGGAGCACT Alignment: ACTGTGACACCACAGTGGAGCACT -------CAHCACAGTGGAGCACT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Original Motif Backward 1 17 0.0456803 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: CACTGTGRTRTCACAGTGSWSCACT --------CAHCACAGTGGAGCACT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Original Motif Original Motif Forward 3 17 0.0894884 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC --CAHCACAGTGGAGCACT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 TgTGgTGTCACAGTGCTCC Original Motif Reverse Complement Backward 2 17 0.0962536 Consensus sequence (original motif): TGTGGTGTCACAGTGCTCC Consensus sequence (reverse complement motif): GGAGCACTGTGACACCACA Alignment: GGAGCACTGTGACACCACA -CAHCACAGTGGAGCACT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 66 CTCF Original Motif Original Motif Forward 2 17 0.0978126 Consensus sequence (original motif): YDRCCASYAGRKGGCRSYV Consensus sequence (reverse complement motif): BMSMGCCYMCTKSTGGMHM Alignment: YDRCCASYAGRKGGCRSYV -CAHCACAGTGGAGCACT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Reverse Complement Reverse Complement Backward 3 17 0.106708 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: CCACTGTGVTGTCACAGTGCTCCA -----AGTGCTCCACTGTGDTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 70 CagTGCTCCACTGTGgT Reverse Complement Original Motif Backward 2 16 0.5 Consensus sequence (original motif): CAGTGCTCCACTGTGBT Consensus sequence (reverse complement motif): ABCACAGTGGAGCACTG Alignment: -CAGTGCTCCACTGTGBT AGTGCTCCACTGTGDTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 71 AmTGTGACACCACAGT Original Motif Reverse Complement Forward 1 16 0.610921 Consensus sequence (original motif): AMTGTGACACCACAGT Consensus sequence (reverse complement motif): ACTGTGGTGTCACART Alignment: ACTGTGGTGTCACART- CAHCACAGTGGAGCACT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 75 wwCCAmAGTCmt Reverse Complement Reverse Complement Backward 1 12 2.5839 Consensus sequence (original motif): DDCCAMAGTCHB Consensus sequence (reverse complement motif): VDGACTRTGGDD Alignment: -----VDGACTRTGGDD AGTGCTCCACTGTGDTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 93 TFM12 Reverse Complement Reverse Complement Forward 9 12 2.60274 Consensus sequence (original motif): RAGKGMAGVRRGSRCASAGV Consensus sequence (reverse complement motif): VCTSTGKSCMKBCTRCYCTK Alignment: VCTSTGKSCMKBCTRCYCTK----- --------AGTGCTCCACTGTGDTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 77 Motif name: AgTGCTCCACTGTGgTGTCACAgT Consensus sequence (original motif): AGTGCTCCACTGTGGTGTCACAGT Consensus sequence (reverse complement motif): ACTGTGACACCACAGTGGAGCACT ************************************************************************ Best Matches for Motif ID 77 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Reverse Complement Forward 2 24 0.0409586 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: AGTGSWSCACTGTGAMAMCACAGTG -AGTGCTCCACTGTGGTGTCACAGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Reverse Complement Reverse Complement Forward 3 22 1.06364 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: CCACTGTGVTGTCACAGTGCTCCA-- --ACTGTGACACCACAGTGGAGCACT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Reverse Complement Original Motif Forward 3 19 2.59599 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC----- --ACTGTGACACCACAGTGGAGCACT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 TgTGgTGTCACAGTGCTCC Reverse Complement Reverse Complement Backward 2 18 3.10123 Consensus sequence (original motif): TGTGGTGTCACAGTGCTCC Consensus sequence (reverse complement motif): GGAGCACTGTGACACCACA Alignment: ------GGAGCACTGTGACACCACA ACTGTGACACCACAGTGGAGCACT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 66 CTCF Original Motif Reverse Complement Backward 2 18 3.10186 Consensus sequence (original motif): YDRCCASYAGRKGGCRSYV Consensus sequence (reverse complement motif): BMSMGCCYMCTKSTGGMHM Alignment: ------BMSMGCCYMCTKSTGGMHM AGTGCTCCACTGTGGTGTCACAGT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 76 CAcCACAGTGGAGCAct Original Motif Reverse Complement Backward 1 17 3.50248 Consensus sequence (original motif): CAHCACAGTGGAGCACT Consensus sequence (reverse complement motif): AGTGCTCCACTGTGDTG Alignment: -------AGTGCTCCACTGTGDTG AGTGCTCCACTGTGGTGTCACAGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 70 CagTGCTCCACTGTGgT Original Motif Original Motif Forward 2 16 4 Consensus sequence (original motif): CAGTGCTCCACTGTGBT Consensus sequence (reverse complement motif): ABCACAGTGGAGCACTG Alignment: CAGTGCTCCACTGTGBT-------- -AGTGCTCCACTGTGGTGTCACAGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 71 AmTGTGACACCACAGT Reverse Complement Original Motif Backward 1 16 4.0041 Consensus sequence (original motif): AMTGTGACACCACAGT Consensus sequence (reverse complement motif): ACTGTGGTGTCACART Alignment: --------AMTGTGACACCACAGT ACTGTGACACCACAGTGGAGCACT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 93 TFM12 Reverse Complement Original Motif Forward 5 16 4.10485 Consensus sequence (original motif): RAGKGMAGVRRGSRCASAGV Consensus sequence (reverse complement motif): VCTSTGKSCMKBCTRCYCTK Alignment: RAGKGMAGVRRGSRCASAGV-------- ----ACTGTGACACCACAGTGGAGCACT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Reverse Complement Reverse Complement Forward 6 15 4.59996 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV--------- -----ACTGTGACACCACAGTGGAGCACT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 78 Motif name: ssGCkTGCssk Consensus sequence (original motif): SSGCKTGCSSK Consensus sequence (reverse complement motif): YSSGCAYGCSS ************************************************************************ Best Matches for Motif ID 78 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 82 gCGCGCsCgsG Original Motif Original Motif Backward 1 11 0.0230178 Consensus sequence (original motif): GCGCGCSCGCG Consensus sequence (reverse complement motif): CGCGSGCGCGC Alignment: GCGCGCSCGCG SSGCKTGCSSK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 74 ssCCCCGCSssk Reverse Complement Reverse Complement Forward 2 11 0.036087 Consensus sequence (original motif): SBCCCCGCCSBB Consensus sequence (reverse complement motif): BBSGGCGGGGBS Alignment: BBSGGCGGGGBS -YSSGCAYGCSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 68 sscCCCGCGcs Reverse Complement Reverse Complement Backward 1 11 0.0375477 Consensus sequence (original motif): BSCCCCGCGBS Consensus sequence (reverse complement motif): SBCGCGGGGSB Alignment: SBCGCGGGGSB YSSGCAYGCSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 79 cCGCGGrCACG Original Motif Original Motif Backward 1 11 0.0461039 Consensus sequence (original motif): CCGCGGRCACG Consensus sequence (reverse complement motif): CGTGKCCGCGG Alignment: CCGCGGRCACG SSGCKTGCSSK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 21 Motif 21 Original Motif Original Motif Backward 2 11 0.0529221 Consensus sequence (original motif): CTGCTTTCCMAA Consensus sequence (reverse complement motif): TTYGGAAAGCAG Alignment: CTGCTTTCCMAA SSGCKTGCSSK- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 66 CTCF Original Motif Original Motif Forward 8 11 0.0533963 Consensus sequence (original motif): YDRCCASYAGRKGGCRSYV Consensus sequence (reverse complement motif): BMSMGCCYMCTKSTGGMHM Alignment: YDRCCASYAGRKGGCRSYV -------SSGCKTGCSSK- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 54 Esrrb Reverse Complement Original Motif Forward 2 11 0.0543224 Consensus sequence (original motif): VBBYCAAGGTCA Consensus sequence (reverse complement motif): TGACCTTGMBBB Alignment: VBBYCAAGGTCA -YSSGCAYGCSS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 ESR2 Reverse Complement Original Motif Backward 3 11 0.0563598 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: VHRGGTCABDBTGMCCTB -----YSSGCAYGCSS-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Reverse Complement Original Motif Backward 10 11 0.0593846 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC -YSSGCAYGCSS--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 64 PPARGRXRA Reverse Complement Original Motif Forward 3 11 0.0598714 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA --YSSGCAYGCSS-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 79 Motif name: cCGCGGrCACG Consensus sequence (original motif): CCGCGGRCACG Consensus sequence (reverse complement motif): CGTGKCCGCGG ************************************************************************ Best Matches for Motif ID 79 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 82 gCGCGCsCgsG Original Motif Original Motif Backward 1 11 0.010473 Consensus sequence (original motif): GCGCGCSCGCG Consensus sequence (reverse complement motif): CGCGSGCGCGC Alignment: GCGCGCSCGCG CCGCGGRCACG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 88 TFF11 Reverse Complement Reverse Complement Backward 1 11 0.0478408 Consensus sequence (original motif): CTGCTGBDBBDGBD Consensus sequence (reverse complement motif): HVCDBBDBCAGCAG Alignment: HVCDBBDBCAGCAG ---CGTGKCCGCGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Original Motif Original Motif Backward 4 11 0.0484441 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC -------CCGCGGRCACG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Reverse Complement Reverse Complement Backward 3 11 0.0486581 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV -------CGTGKCCGCGG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 78 ssGCkTGCssk Original Motif Original Motif Backward 1 11 0.0503056 Consensus sequence (original motif): SSGCKTGCSSK Consensus sequence (reverse complement motif): YSSGCAYGCSS Alignment: SSGCKTGCSSK CCGCGGRCACG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 74 ssCCCCGCSssk Reverse Complement Reverse Complement Backward 2 11 0.055777 Consensus sequence (original motif): SBCCCCGCCSBB Consensus sequence (reverse complement motif): BBSGGCGGGGBS Alignment: BBSGGCGGGGBS CGTGKCCGCGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 66 CTCF Original Motif Original Motif Forward 8 11 0.0588663 Consensus sequence (original motif): YDRCCASYAGRKGGCRSYV Consensus sequence (reverse complement motif): BMSMGCCYMCTKSTGGMHM Alignment: YDRCCASYAGRKGGCRSYV -------CCGCGGRCACG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 3 Motif 3 Original Motif Original Motif Forward 2 11 0.0597806 Consensus sequence (original motif): HCAGRRVACASAG Consensus sequence (reverse complement motif): CTSTGTBKMCTGH Alignment: HCAGRRVACASAG -CCGCGGRCACG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 2 Motif 2 Reverse Complement Reverse Complement Backward 3 11 0.0624268 Consensus sequence (original motif): ACACACACACACAC Consensus sequence (reverse complement motif): GTGTGTGTGTGTGT Alignment: GTGTGTGTGTGTGT -CGTGKCCGCGG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 93 TFM12 Original Motif Original Motif Backward 5 11 0.0625015 Consensus sequence (original motif): RAGKGMAGVRRGSRCASAGV Consensus sequence (reverse complement motif): VCTSTGKSCMKBCTRCYCTK Alignment: RAGKGMAGVRRGSRCASAGV -----CCGCGGRCACG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 80 Motif name: taaacgatgcc Consensus sequence (original motif): TAAACGATGCC Consensus sequence (reverse complement motif): GGCATCGTTTA ************************************************************************ Best Matches for Motif ID 80 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 46 Motif 46 Original Motif Reverse Complement Backward 1 11 0.102273 Consensus sequence (original motif): ATAGGTTTAGYATA Consensus sequence (reverse complement motif): TATKCTAAACCTAT Alignment: TATKCTAAACCTAT ---TAAACGATGCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 9 Motif 9 Original Motif Reverse Complement Backward 2 11 0.113636 Consensus sequence (original motif): AACATATTTTCA Consensus sequence (reverse complement motif): TGAAAATATGTT Alignment: TGAAAATATGTT TAAACGATGCC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 23 Motif 23 Reverse Complement Original Motif Forward 2 11 0.113636 Consensus sequence (original motif): ATGTWTTCATTMAT Consensus sequence (reverse complement motif): ATYAATGAAWACAT Alignment: ATGTWTTCATTMAT -GGCATCGTTTA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 60 NR1H2RXRA Original Motif Reverse Complement Backward 3 11 0.113636 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: GTTGACCTTTGACCTTT ----TAAACGATGCC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 52 NR2F1 Original Motif Original Motif Forward 1 11 0.118881 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: TGAMCTTTGMMCYT TAAACGATGCC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 11 Motif 11 Original Motif Reverse Complement Backward 2 11 0.125 Consensus sequence (original motif): AAMATGTTTMAA Consensus sequence (reverse complement motif): TTYAAACATYTT Alignment: TTYAAACATYTT TAAACGATGCC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 45 Motif 45 Original Motif Reverse Complement Backward 2 11 0.125 Consensus sequence (original motif): TAASTCTWTTTTAA Consensus sequence (reverse complement motif): TTAAAAWAGASTTA Alignment: TTAAAAWAGASTTA --TAAACGATGCC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 10 Motif 10 Original Motif Reverse Complement Forward 2 10 0.5875 Consensus sequence (original motif): AAAMATTGTTT Consensus sequence (reverse complement motif): AAACAATYTTT Alignment: AAACAATYTTT- -TAAACGATGCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 30 Motif 30 Original Motif Reverse Complement Forward 2 10 0.6 Consensus sequence (original motif): TTGCTGCTTTT Consensus sequence (reverse complement motif): AAAAGCAGCAA Alignment: AAAAGCAGCAA- -TAAACGATGCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 69 atactttggc Original Motif Original Motif Backward 1 10 0.6 Consensus sequence (original motif): ATACTTTGGC Consensus sequence (reverse complement motif): GCCAAAGTAT Alignment: -ATACTTTGGC TAAACGATGCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 81 Motif name: ctatacggacg Consensus sequence (original motif): CTATACGGACG Consensus sequence (reverse complement motif): CGTCCGTATAG ************************************************************************ Best Matches for Motif ID 81 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 27 Motif 27 Original Motif Reverse Complement Forward 1 11 0.102273 Consensus sequence (original motif): ATTCTGTRAAG Consensus sequence (reverse complement motif): CTTKACAGAAT Alignment: CTTKACAGAAT CTATACGGACG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 83 srACyCCGAyr Original Motif Original Motif Backward 1 11 0.125 Consensus sequence (original motif): SRACYCCGAYR Consensus sequence (reverse complement motif): KKTCGGKGTKS Alignment: SRACYCCGAYR CTATACGGACG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 46 Motif 46 Original Motif Reverse Complement Backward 5 10 0.6 Consensus sequence (original motif): ATAGGTTTAGYATA Consensus sequence (reverse complement motif): TATKCTAAACCTAT Alignment: -TATKCTAAACCTAT CTATACGGACG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 89 TFM1 Reverse Complement Reverse Complement Forward 9 10 0.624107 Consensus sequence (original motif): CACACACACACWCACACA Consensus sequence (reverse complement motif): TGTGTGWGTGTGTGTGTG Alignment: TGTGTGWGTGTGTGTGTG- --------CGTCCGTATAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 80 taaacgatgcc Reverse Complement Reverse Complement Forward 2 10 0.625 Consensus sequence (original motif): TAAACGATGCC Consensus sequence (reverse complement motif): GGCATCGTTTA Alignment: GGCATCGTTTA- -CGTCCGTATAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 20 Motif 20 Original Motif Reverse Complement Forward 2 10 0.625 Consensus sequence (original motif): TCCTCCTGGAA Consensus sequence (reverse complement motif): TTCCAGGAGGA Alignment: TTCCAGGAGGA- -CTATACGGACG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 22 Motif 22 Reverse Complement Reverse Complement Forward 5 10 0.625 Consensus sequence (original motif): TTTATGGTGAGCAT Consensus sequence (reverse complement motif): ATGCTCACCATAAA Alignment: ATGCTCACCATAAA- ----CGTCCGTATAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 28 Motif 28 Reverse Complement Original Motif Backward 1 10 0.625 Consensus sequence (original motif): ATTTAGTAAA Consensus sequence (reverse complement motif): TTTACTAAAT Alignment: -ATTTAGTAAA CGTCCGTATAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 21 Motif 21 Reverse Complement Reverse Complement Backward 4 9 1.09722 Consensus sequence (original motif): CTGCTTTCCMAA Consensus sequence (reverse complement motif): TTYGGAAAGCAG Alignment: --TTYGGAAAGCAG CGTCCGTATAG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 63 MIZF Reverse Complement Reverse Complement Forward 2 9 1.10694 Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV Alignment: GCGGACGTTV-- -CGTCCGTATAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 82 Motif name: gCGCGCsCgsG Consensus sequence (original motif): GCGCGCSCGCG Consensus sequence (reverse complement motif): CGCGSGCGCGC ************************************************************************ Best Matches for Motif ID 82 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 79 cCGCGGrCACG Original Motif Original Motif Backward 1 11 0.0131931 Consensus sequence (original motif): CCGCGGRCACG Consensus sequence (reverse complement motif): CGTGKCCGCGG Alignment: CCGCGGRCACG GCGCGCSCGCG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 78 ssGCkTGCssk Original Motif Original Motif Backward 1 11 0.0299395 Consensus sequence (original motif): SSGCKTGCSSK Consensus sequence (reverse complement motif): YSSGCAYGCSS Alignment: SSGCKTGCSSK GCGCGCSCGCG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 68 sscCCCGCGcs Reverse Complement Reverse Complement Forward 1 11 0.0338798 Consensus sequence (original motif): BSCCCCGCGBS Consensus sequence (reverse complement motif): SBCGCGGGGSB Alignment: SBCGCGGGGSB CGCGSGCGCGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 74 ssCCCCGCSssk Reverse Complement Reverse Complement Forward 2 11 0.0410595 Consensus sequence (original motif): SBCCCCGCCSBB Consensus sequence (reverse complement motif): BBSGGCGGGGBS Alignment: BBSGGCGGGGBS -CGCGSGCGCGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 66 CTCF Original Motif Reverse Complement Forward 7 11 0.0537298 Consensus sequence (original motif): YDRCCASYAGRKGGCRSYV Consensus sequence (reverse complement motif): BMSMGCCYMCTKSTGGMHM Alignment: BMSMGCCYMCTKSTGGMHM ------GCGCGCSCGCG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Original Motif Reverse Complement Backward 7 11 0.0651602 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV ---GCGCGCSCGCG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 88 TFF11 Reverse Complement Reverse Complement Backward 1 11 0.0669956 Consensus sequence (original motif): CTGCTGBDBBDGBD Consensus sequence (reverse complement motif): HVCDBBDBCAGCAG Alignment: HVCDBBDBCAGCAG ---CGCGSGCGCGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 63 MIZF Original Motif Original Motif Forward 1 10 0.55601 Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV Alignment: BAACGTCCGC- GCGCGCSCGCG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 47 Motif 47 Original Motif Original Motif Backward 5 10 0.557768 Consensus sequence (original motif): YGCCACCTDSTGGY Consensus sequence (reverse complement motif): KCCASDAGGTGGCK Alignment: -YGCCACCTDSTGGY GCGCGCSCGCG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 58 Myc Original Motif Reverse Complement Forward 1 10 0.561823 Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV Alignment: DCCACGTGCV- GCGCGCSCGCG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 83 Motif name: srACyCCGAyr Consensus sequence (original motif): SRACYCCGAYR Consensus sequence (reverse complement motif): KKTCGGKGTKS ************************************************************************ Best Matches for Motif ID 83 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 92 TFM11 Reverse Complement Reverse Complement Backward 8 11 0.0337509 Consensus sequence (original motif): CAMACACACACAYDCACACA Consensus sequence (reverse complement motif): TGTGTGDKTGTGTGTGTRTG Alignment: TGTGTGDKTGTGTGTGTRTG --KKTCGGKGTKS------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Reverse Complement Reverse Complement Forward 2 11 0.0342809 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV -KKTCGGKGTKS-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 89 TFM1 Reverse Complement Reverse Complement Forward 7 11 0.0348124 Consensus sequence (original motif): CACACACACACWCACACA Consensus sequence (reverse complement motif): TGTGTGWGTGTGTGTGTG Alignment: TGTGTGWGTGTGTGTGTG ------KKTCGGKGTKS- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Reverse Complement Reverse Complement Backward 5 11 0.0372475 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: CCACTGTGVTGTCACAGTGCTCCA ---------KKTCGGKGTKS---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 ESR2 Original Motif Reverse Complement Forward 4 11 0.0379796 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: BAGGYCABHBTGACCKHV ---SRACYCCGAYR---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 TgTGgTGTCACAGTGCTCC Original Motif Reverse Complement Forward 6 11 0.0381944 Consensus sequence (original motif): TGTGGTGTCACAGTGCTCC Consensus sequence (reverse complement motif): GGAGCACTGTGACACCACA Alignment: GGAGCACTGTGACACCACA -----SRACYCCGAYR--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 6 Motif 6 Reverse Complement Reverse Complement Backward 2 11 0.039412 Consensus sequence (original motif): CASABACWSACACA Consensus sequence (reverse complement motif): TGTGTSWGTBTSTG Alignment: TGTGTSWGTBTSTG --KKTCGGKGTKS- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Reverse Complement Backward 7 11 0.0397727 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: AGTGSWSCACTGTGAMAMCACAGTG --------SRACYCCGAYR------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Reverse Complement Reverse Complement Backward 5 11 0.0402801 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA ------KKTCGGKGTKS---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 2 Motif 2 Reverse Complement Reverse Complement Forward 2 11 0.0438762 Consensus sequence (original motif): ACACACACACACAC Consensus sequence (reverse complement motif): GTGTGTGTGTGTGT Alignment: GTGTGTGTGTGTGT -KKTCGGKGTKS-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 84 Motif name: TFW3 Consensus sequence (original motif): GCACTG Consensus sequence (reverse complement motif): CAGTGC ************************************************************************ Best Matches for Motif ID 84 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 TgTGgTGTCACAGTGCTCC Original Motif Reverse Complement Forward 11 6 0 Consensus sequence (original motif): TGTGGTGTCACAGTGCTCC Consensus sequence (reverse complement motif): GGAGCACTGTGACACCACA Alignment: GGAGCACTGTGACACCACA ----------GCACTG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Reverse Complement Backward 7 6 0.000794289 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: AGTGSWSCACTGTGAMAMCACAGTG -------------GCACTG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Reverse Complement Reverse Complement Backward 5 6 0.00482436 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: CCACTGTGVTGTCACAGTGCTCCA --------------CAGTGC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 76 CAcCACAGTGGAGCAct Reverse Complement Original Motif Forward 7 6 0.0201914 Consensus sequence (original motif): CAHCACAGTGGAGCACT Consensus sequence (reverse complement motif): AGTGCTCCACTGTGDTG Alignment: CAHCACAGTGGAGCACT ------CAGTGC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 70 CagTGCTCCACTGTGgT Reverse Complement Reverse Complement Backward 8 6 0.0205497 Consensus sequence (original motif): CAGTGCTCCACTGTGBT Consensus sequence (reverse complement motif): ABCACAGTGGAGCACTG Alignment: ABCACAGTGGAGCACTG ----CAGTGC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 AgTGCTCCACTGTGgTGTCACAgT Original Motif Original Motif Backward 13 6 0.0290883 Consensus sequence (original motif): AGTGCTCCACTGTGGTGTCACAGT Consensus sequence (reverse complement motif): ACTGTGACACCACAGTGGAGCACT Alignment: AGTGCTCCACTGTGGTGTCACAGT ------GCACTG------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Reverse Complement Original Motif Backward 15 6 0.039883 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC -CAGTGC-------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 65 Tcfcp2l1 Reverse Complement Original Motif Forward 8 6 0.0447224 Consensus sequence (original motif): CCAGYYHVADCCRG Consensus sequence (reverse complement motif): CKGGDTBDMMCTGG Alignment: CCAGYYHVADCCRG -------CAGTGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 5 Motif 5 Original Motif Reverse Complement Backward 9 6 0.0459818 Consensus sequence (original motif): CWGAGCCAYCTYTC Consensus sequence (reverse complement motif): GAKAGKTGGCTCWG Alignment: GAKAGKTGGCTCWG GCACTG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 75 wwCCAmAGTCmt Original Motif Reverse Complement Forward 6 6 0.0587933 Consensus sequence (original motif): DDCCAMAGTCHB Consensus sequence (reverse complement motif): VDGACTRTGGDD Alignment: VDGACTRTGGDD -----GCACTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 85 Motif name: TFW1 Consensus sequence (original motif): TTGCGCAA Consensus sequence (reverse complement motif): TTGCGCAA ************************************************************************ Best Matches for Motif ID 85 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 21 Motif 21 Original Motif Reverse Complement Backward 1 8 0.0195312 Consensus sequence (original motif): CTGCTTTCCMAA Consensus sequence (reverse complement motif): TTYGGAAAGCAG Alignment: TTYGGAAAGCAG ----TTGCGCAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 52 NR2F1 Reverse Complement Reverse Complement Forward 1 8 0.0276442 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: AKGYYCAAAGRTCA TTGCGCAA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 64 PPARGRXRA Reverse Complement Original Motif Forward 7 8 0.0277567 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA ------TTGCGCAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 28 Motif 28 Original Motif Reverse Complement Forward 2 8 0.0328125 Consensus sequence (original motif): ATTTAGTAAA Consensus sequence (reverse complement motif): TTTACTAAAT Alignment: TTTACTAAAT -TTGCGCAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 76 CAcCACAGTGGAGCAct Reverse Complement Original Motif Forward 2 8 0.0336914 Consensus sequence (original motif): CAHCACAGTGGAGCACT Consensus sequence (reverse complement motif): AGTGCTCCACTGTGDTG Alignment: CAHCACAGTGGAGCACT -TTGCGCAA-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Original Motif Original Motif Backward 17 8 0.0338471 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: TGGAGCACTGTGACAVCACAGTGG TTGCGCAA---------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 77 AgTGCTCCACTGTGgTGTCACAgT Reverse Complement Original Motif Forward 16 8 0.034375 Consensus sequence (original motif): AGTGCTCCACTGTGGTGTCACAGT Consensus sequence (reverse complement motif): ACTGTGACACCACAGTGGAGCACT Alignment: AGTGCTCCACTGTGGTGTCACAGT ---------------TTGCGCAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 70 CagTGCTCCACTGTGgT Reverse Complement Original Motif Backward 3 8 0.0354167 Consensus sequence (original motif): CAGTGCTCCACTGTGBT Consensus sequence (reverse complement motif): ABCACAGTGGAGCACTG Alignment: CAGTGCTCCACTGTGBT -------TTGCGCAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 91 TFM3 Reverse Complement Original Motif Backward 2 8 0.0359375 Consensus sequence (original motif): KTTTTTTKTTTTTTDAAB Consensus sequence (reverse complement motif): BTTHAAAAAAYAAAAAAR Alignment: KTTTTTTKTTTTTTDAAB ---------TTGCGCAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Original Motif Backward 3 8 0.0407242 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: CACTGTGRTRTCACAGTGSWSCACT ---------------TTGCGCAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 86 Motif name: TFW2 Consensus sequence (original motif): YGGACTTACG Consensus sequence (reverse complement motif): CGTAAGTCCK ************************************************************************ Best Matches for Motif ID 86 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 75 wwCCAmAGTCmt Original Motif Reverse Complement Backward 1 10 0.0441919 Consensus sequence (original motif): DDCCAMAGTCHB Consensus sequence (reverse complement motif): VDGACTRTGGDD Alignment: VDGACTRTGGDD --YGGACTTACG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 54 Esrrb Reverse Complement Original Motif Backward 3 10 0.0583503 Consensus sequence (original motif): VBBYCAAGGTCA Consensus sequence (reverse complement motif): TGACCTTGMBBB Alignment: VBBYCAAGGTCA CGTAAGTCCK-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 51 HNF4A Original Motif Reverse Complement Backward 1 10 0.063039 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: TGMYCTTTGBCCK ---YGGACTTACG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Original Motif Original Motif Backward 2 10 0.0662938 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC ----------YGGACTTACG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 52 NR2F1 Original Motif Original Motif Forward 1 10 0.0672009 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: TGAMCTTTGMMCYT YGGACTTACG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Reverse Complement Original Motif Backward 3 10 0.0684067 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY --------CGTAAGTCCK-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 64 PPARGRXRA Reverse Complement Reverse Complement Forward 4 10 0.0692256 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: TGRCCTKTGHCCKAB ---CGTAAGTCCK-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 8 Motif 8 Original Motif Reverse Complement Backward 2 10 0.0694444 Consensus sequence (original motif): TGAAAATSCTT Consensus sequence (reverse complement motif): AAGSATTTTCA Alignment: AAGSATTTTCA YGGACTTACG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 87 TFF1 Reverse Complement Reverse Complement Forward 3 10 0.0707746 Consensus sequence (original motif): AGGACAAAGAVV Consensus sequence (reverse complement motif): VVTCTTTGTCCT Alignment: VVTCTTTGTCCT --CGTAAGTCCK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 60 NR1H2RXRA Original Motif Reverse Complement Forward 7 10 0.0713889 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: GTTGACCTTTGACCTTT ------YGGACTTACG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 87 Motif name: TFF1 Consensus sequence (original motif): AGGACAAAGAVV Consensus sequence (reverse complement motif): VVTCTTTGTCCT ************************************************************************ Best Matches for Motif ID 87 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 51 HNF4A Reverse Complement Reverse Complement Forward 2 12 0.0111472 Consensus sequence (original motif): RGGBCAAAGKYCA Consensus sequence (reverse complement motif): TGMYCTTTGBCCK Alignment: TGMYCTTTGBCCK -VVTCTTTGTCCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 64 PPARGRXRA Original Motif Original Motif Forward 3 12 0.0210867 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA --AGGACAAAGAVV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 ESR2 Reverse Complement Reverse Complement Forward 5 12 0.0351633 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: BAGGYCABHBTGACCKHV ----VVTCTTTGTCCT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Reverse Complement Original Motif Backward 9 12 0.039773 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY VVTCTTTGTCCT-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 93 TFM12 Original Motif Original Motif Backward 8 12 0.0408272 Consensus sequence (original motif): RAGKGMAGVRRGSRCASAGV Consensus sequence (reverse complement motif): VCTSTGKSCMKBCTRCYCTK Alignment: RAGKGMAGVRRGSRCASAGV -AGGACAAAGAVV------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 52 NR2F1 Original Motif Reverse Complement Forward 2 12 0.0472374 Consensus sequence (original motif): TGAMCTTTGMMCYT Consensus sequence (reverse complement motif): AKGYYCAAAGRTCA Alignment: AKGYYCAAAGRTCA -AGGACAAAGAVV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 60 NR1H2RXRA Reverse Complement Reverse Complement Forward 4 12 0.0472884 Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: GTTGACCTTTGACCTTT ---VVTCTTTGTCCT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Original Motif Backward 7 12 0.0530556 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: CACTGTGRTRTCACAGTGSWSCACT -------AGGACAAAGAVV------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Original Motif Original Motif Forward 13 12 0.0539204 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: TGGAGCACTGTGACAVCACAGTGG ------------AGGACAAAGAVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Original Motif Original Motif Forward 4 12 0.0558379 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC ---AGGACAAAGAVV------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 88 Motif name: TFF11 Consensus sequence (original motif): CTGCTGBDBBDGBD Consensus sequence (reverse complement motif): HVCDBBDBCAGCAG ************************************************************************ Best Matches for Motif ID 88 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 90 TFM2 Original Motif Reverse Complement Forward 2 14 0.03576 Consensus sequence (original motif): CHHCHBTCCTSCYTCTGC Consensus sequence (reverse complement motif): GCAGAKGSAGGABDGHDG Alignment: GCAGAKGSAGGABDGHDG -CTGCTGBDBBDGBD--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 93 TFM12 Reverse Complement Original Motif Forward 4 14 0.0381494 Consensus sequence (original motif): RAGKGMAGVRRGSRCASAGV Consensus sequence (reverse complement motif): VCTSTGKSCMKBCTRCYCTK Alignment: RAGKGMAGVRRGSRCASAGV ---HVCDBBDBCAGCAG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Original Motif Reverse Complement Forward 7 14 0.0491354 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA ------CTGCTGBDBBDGBD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Reverse Complement Original Motif Backward 2 14 0.0521061 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY -----HVCDBBDBCAGCAG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 ESR2 Original Motif Original Motif Forward 2 14 0.0565525 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: VHRGGTCABDBTGMCCTB -CTGCTGBDBBDGBD--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 64 PPARGRXRA Reverse Complement Original Motif Forward 2 14 0.0584136 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA -HVCDBBDBCAGCAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 TgTGgTGTCACAGTGCTCC Reverse Complement Reverse Complement Forward 5 14 0.0586124 Consensus sequence (original motif): TGTGGTGTCACAGTGCTCC Consensus sequence (reverse complement motif): GGAGCACTGTGACACCACA Alignment: GGAGCACTGTGACACCACA ----HVCDBBDBCAGCAG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Original Motif Reverse Complement Backward 6 14 0.060085 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: CCACTGTGVTGTCACAGTGCTCCA -----CTGCTGBDBBDGBD----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 65 Tcfcp2l1 Original Motif Reverse Complement Backward 1 14 0.0669051 Consensus sequence (original motif): CCAGYYHVADCCRG Consensus sequence (reverse complement motif): CKGGDTBDMMCTGG Alignment: CKGGDTBDMMCTGG CTGCTGBDBBDGBD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 66 CTCF Reverse Complement Reverse Complement Forward 2 14 0.0670544 Consensus sequence (original motif): YDRCCASYAGRKGGCRSYV Consensus sequence (reverse complement motif): BMSMGCCYMCTKSTGGMHM Alignment: BMSMGCCYMCTKSTGGMHM -HVCDBBDBCAGCAG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 89 Motif name: TFM1 Consensus sequence (original motif): CACACACACACWCACACA Consensus sequence (reverse complement motif): TGTGTGWGTGTGTGTGTG ************************************************************************ Best Matches for Motif ID 89 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 92 TFM11 Original Motif Original Motif Forward 3 18 0 Consensus sequence (original motif): CAMACACACACAYDCACACA Consensus sequence (reverse complement motif): TGTGTGDKTGTGTGTGTRTG Alignment: CAMACACACACAYDCACACA --CACACACACACWCACACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 91 TFM3 Reverse Complement Original Motif Backward 1 18 0.099254 Consensus sequence (original motif): KTTTTTTKTTTTTTDAAB Consensus sequence (reverse complement motif): BTTHAAAAAAYAAAAAAR Alignment: KTTTTTTKTTTTTTDAAB TGTGTGWGTGTGTGTGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Original Motif Original Motif Forward 4 17 0.598911 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY- ---CACACACACACWCACACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 TgTGgTGTCACAGTGCTCC Original Motif Reverse Complement Forward 4 16 1.09969 Consensus sequence (original motif): TGTGGTGTCACAGTGCTCC Consensus sequence (reverse complement motif): GGAGCACTGTGACACCACA Alignment: GGAGCACTGTGACACCACA-- ---CACACACACACWCACACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 94 TFM13 Reverse Complement Original Motif Backward 6 15 1.59953 Consensus sequence (original motif): TTTTTTTKTTKTTTAATTHW Consensus sequence (reverse complement motif): WHAATTAAARAARAAAAAAA Alignment: ---TTTTTTTKTTKTTTAATTHW TGTGTGWGTGTGTGTGTG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 6 Motif 6 Original Motif Original Motif Backward 1 14 2.04528 Consensus sequence (original motif): CASABACWSACACA Consensus sequence (reverse complement motif): TGTGTSWGTBTSTG Alignment: ----CASABACWSACACA CACACACACACWCACACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 4 Motif 4 Original Motif Original Motif Forward 1 14 2.09655 Consensus sequence (original motif): HAAAAHAAARMAAA Consensus sequence (reverse complement motif): TTTRKTTTHTTTTH Alignment: HAAAAHAAARMAAA---- CACACACACACWCACACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 2 Motif 2 Original Motif Original Motif Forward 2 13 2.51954 Consensus sequence (original motif): ACACACACACACAC Consensus sequence (reverse complement motif): GTGTGTGTGTGTGT Alignment: ACACACACACACAC----- -CACACACACACWCACACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 ESR2 Original Motif Reverse Complement Backward 6 13 2.59375 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: -----BAGGYCABHBTGACCKHV CACACACACACWCACACA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Original Motif Original Motif Forward 9 13 2.59669 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: TTCAGCACCATGGACAGCKCC----- --------CACACACACACWCACACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 90 Motif name: TFM2 Consensus sequence (original motif): CHHCHBTCCTSCYTCTGC Consensus sequence (reverse complement motif): GCAGAKGSAGGABDGHDG ************************************************************************ Best Matches for Motif ID 90 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 93 TFM12 Reverse Complement Original Motif Forward 3 18 0.0675327 Consensus sequence (original motif): RAGKGMAGVRRGSRCASAGV Consensus sequence (reverse complement motif): VCTSTGKSCMKBCTRCYCTK Alignment: RAGKGMAGVRRGSRCASAGV --GCAGAKGSAGGABDGHDG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Original Motif Original Motif Forward 2 18 0.0741766 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: VDBHMAGGTCACCCTGACCY -CHHCHBTCCTSCYTCTGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 66 CTCF Reverse Complement Original Motif Backward 1 18 0.0893246 Consensus sequence (original motif): YDRCCASYAGRKGGCRSYV Consensus sequence (reverse complement motif): BMSMGCCYMCTKSTGGMHM Alignment: YDRCCASYAGRKGGCRSYV -GCAGAKGSAGGABDGHDG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Reverse Complement Original Motif Forward 1 18 0.0901636 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: TGGAGCACTGTGACAVCACAGTGG GCAGAKGSAGGABDGHDG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 ESR2 Original Motif Reverse Complement Backward 2 17 0.58153 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: -BAGGYCABHBTGACCKHV CHHCHBTCCTSCYTCTGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 64 PPARGRXRA Reverse Complement Original Motif Forward 1 15 1.58383 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: BTRGGDCARAGGKCA--- GCAGAKGSAGGABDGHDG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Original Motif Original Motif Forward 11 15 1.5846 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: CACTGTGRTRTCACAGTGSWSCACT--- ----------CHHCHBTCCTSCYTCTGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 88 TFF11 Original Motif Reverse Complement Backward 1 14 2.05771 Consensus sequence (original motif): CTGCTGBDBBDGBD Consensus sequence (reverse complement motif): HVCDBBDBCAGCAG Alignment: ----HVCDBBDBCAGCAG CHHCHBTCCTSCYTCTGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 65 Tcfcp2l1 Reverse Complement Reverse Complement Backward 1 14 2.08379 Consensus sequence (original motif): CCAGYYHVADCCRG Consensus sequence (reverse complement motif): CKGGDTBDMMCTGG Alignment: ----CKGGDTBDMMCTGG GCAGAKGSAGGABDGHDG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Reverse Complement Original Motif Backward 8 14 2.08495 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: ----TTCAGCACCATGGACAGCKCC GCAGAKGSAGGABDGHDG------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 91 Motif name: TFM3 Consensus sequence (original motif): KTTTTTTKTTTTTTDAAB Consensus sequence (reverse complement motif): BTTHAAAAAAYAAAAAAR ************************************************************************ Best Matches for Motif ID 91 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 94 TFM13 Original Motif Original Motif Forward 1 18 0.00694444 Consensus sequence (original motif): TTTTTTTKTTKTTTAATTHW Consensus sequence (reverse complement motif): WHAATTAAARAARAAAAAAA Alignment: TTTTTTTKTTKTTTAATTHW KTTTTTTKTTTTTTDAAB-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 89 TFM1 Reverse Complement Original Motif Backward 1 18 0.0750248 Consensus sequence (original motif): CACACACACACWCACACA Consensus sequence (reverse complement motif): TGTGTGWGTGTGTGTGTG Alignment: CACACACACACWCACACA BTTHAAAAAAYAAAAAAR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 92 TFM11 Original Motif Reverse Complement Forward 6 15 1.57541 Consensus sequence (original motif): CAMACACACACAYDCACACA Consensus sequence (reverse complement motif): TGTGTGDKTGTGTGTGTRTG Alignment: TGTGTGDKTGTGTGTGTRTG--- -----KTTTTTTKTTTTTTDAAB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 49 Motif 49 Reverse Complement Original Motif Forward 1 14 2.01116 Consensus sequence (original motif): AAAAAAAAAAAAAT Consensus sequence (reverse complement motif): ATTTTTTTTTTTTT Alignment: AAAAAAAAAAAAAT---- BTTHAAAAAAYAAAAAAR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 4 Motif 4 Original Motif Reverse Complement Backward 1 14 2.02946 Consensus sequence (original motif): HAAAAHAAARMAAA Consensus sequence (reverse complement motif): TTTRKTTTHTTTTH Alignment: ----TTTRKTTTHTTTTH KTTTTTTKTTTTTTDAAB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 33 Motif 33 Original Motif Original Motif Forward 1 14 2.0692 Consensus sequence (original motif): TTTAATGTYTTTWA Consensus sequence (reverse complement motif): TWAAAKACATTAAA Alignment: TTTAATGTYTTTWA---- KTTTTTTKTTTTTTDAAB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 6 Motif 6 Reverse Complement Original Motif Forward 1 14 2.0735 Consensus sequence (original motif): CASABACWSACACA Consensus sequence (reverse complement motif): TGTGTSWGTBTSTG Alignment: CASABACWSACACA---- BTTHAAAAAAYAAAAAAR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 45 Motif 45 Original Motif Original Motif Forward 1 14 2.07366 Consensus sequence (original motif): TAASTCTWTTTTAA Consensus sequence (reverse complement motif): TTAAAAWAGASTTA Alignment: TAASTCTWTTTTAA---- KTTTTTTKTTTTTTDAAB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 15 Motif 15 Original Motif Reverse Complement Backward 1 13 2.56147 Consensus sequence (original motif): AAAGRTMAAACTA Consensus sequence (reverse complement motif): TAGTTTYAKCTTT Alignment: -----TAGTTTYAKCTTT KTTTTTTKTTTTTTDAAB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 23 Motif 23 Reverse Complement Reverse Complement Backward 2 13 2.56748 Consensus sequence (original motif): ATGTWTTCATTMAT Consensus sequence (reverse complement motif): ATYAATGAAWACAT Alignment: -----ATYAATGAAWACAT BTTHAAAAAAYAAAAAAR- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 92 Motif name: TFM11 Consensus sequence (original motif): CAMACACACACAYDCACACA Consensus sequence (reverse complement motif): TGTGTGDKTGTGTGTGTRTG ************************************************************************ Best Matches for Motif ID 92 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 94 TFM13 Reverse Complement Original Motif Forward 2 19 0.0921695 Consensus sequence (original motif): TTTTTTTKTTKTTTAATTHW Consensus sequence (reverse complement motif): WHAATTAAARAARAAAAAAA Alignment: TTTTTTTKTTKTTTAATTHW- -TGTGTGDKTGTGTGTGTRTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 89 TFM1 Reverse Complement Reverse Complement Forward 1 18 0.5 Consensus sequence (original motif): CACACACACACWCACACA Consensus sequence (reverse complement motif): TGTGTGWGTGTGTGTGTG Alignment: TGTGTGWGTGTGTGTGTG-- TGTGTGDKTGTGTGTGTRTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 TgTGgTGTCACAGTGCTCC Original Motif Reverse Complement Forward 4 16 1.597 Consensus sequence (original motif): TGTGGTGTCACAGTGCTCC Consensus sequence (reverse complement motif): GGAGCACTGTGACACCACA Alignment: GGAGCACTGTGACACCACA---- ---CAMACACACACAYDCACACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 91 TFM3 Original Motif Reverse Complement Backward 4 15 2.09964 Consensus sequence (original motif): KTTTTTTKTTTTTTDAAB Consensus sequence (reverse complement motif): BTTHAAAAAAYAAAAAAR Alignment: -----BTTHAAAAAAYAAAAAAR CAMACACACACAYDCACACA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 6 Motif 6 Reverse Complement Reverse Complement Forward 1 14 2.54253 Consensus sequence (original motif): CASABACWSACACA Consensus sequence (reverse complement motif): TGTGTSWGTBTSTG Alignment: TGTGTSWGTBTSTG------ TGTGTGDKTGTGTGTGTRTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 93 TFM12 Original Motif Original Motif Forward 7 14 2.59651 Consensus sequence (original motif): RAGKGMAGVRRGSRCASAGV Consensus sequence (reverse complement motif): VCTSTGKSCMKBCTRCYCTK Alignment: RAGKGMAGVRRGSRCASAGV------ ------CAMACACACACAYDCACACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 4 Motif 4 Original Motif Original Motif Forward 1 14 2.59861 Consensus sequence (original motif): HAAAAHAAARMAAA Consensus sequence (reverse complement motif): TTTRKTTTHTTTTH Alignment: HAAAAHAAARMAAA------ CAMACACACACAYDCACACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 2 Motif 2 Original Motif Original Motif Forward 2 13 3.02049 Consensus sequence (original motif): ACACACACACACAC Consensus sequence (reverse complement motif): GTGTGTGTGTGTGT Alignment: ACACACACACACAC------- -CAMACACACACAYDCACACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 90 TFM2 Reverse Complement Reverse Complement Forward 6 13 3.09283 Consensus sequence (original motif): CHHCHBTCCTSCYTCTGC Consensus sequence (reverse complement motif): GCAGAKGSAGGABDGHDG Alignment: GCAGAKGSAGGABDGHDG------- -----TGTGTGDKTGTGTGTGTRTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 3 Motif 3 Original Motif Original Motif Forward 1 13 3.09411 Consensus sequence (original motif): HCAGRRVACASAG Consensus sequence (reverse complement motif): CTSTGTBKMCTGH Alignment: HCAGRRVACASAG------- CAMACACACACAYDCACACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 93 Motif name: TFM12 Consensus sequence (original motif): RAGKGMAGVRRGSRCASAGV Consensus sequence (reverse complement motif): VCTSTGKSCMKBCTRCYCTK ************************************************************************ Best Matches for Motif ID 93 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 73 TGGAGCACTGTGACAcCACAGTGg Original Motif Original Motif Backward 3 20 0.0627086 Consensus sequence (original motif): TGGAGCACTGTGACAVCACAGTGG Consensus sequence (reverse complement motif): CCACTGTGVTGTCACAGTGCTCCA Alignment: TGGAGCACTGTGACAVCACAGTGG --RAGKGMAGVRRGSRCASAGV-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 72 CACTGTGrYrtCACAGTGswsCAcT Reverse Complement Original Motif Backward 2 20 0.063541 Consensus sequence (original motif): CACTGTGRTRTCACAGTGSWSCACT Consensus sequence (reverse complement motif): AGTGSWSCACTGTGAMAMCACAGTG Alignment: CACTGTGRTRTCACAGTGSWSCACT ----VCTSTGKSCMKBCTRCYCTK- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 57 REST Reverse Complement Reverse Complement Backward 1 20 0.0650732 Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA -VCTSTGKSCMKBCTRCYCTK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 53 ESR1 Original Motif Reverse Complement Forward 2 19 0.541945 Consensus sequence (original motif): VDBHMAGGTCACCCTGACCY Consensus sequence (reverse complement motif): MGGTCAGGGTGACCTRDBHV Alignment: MGGTCAGGGTGACCTRDBHV- -RAGKGMAGVRRGSRCASAGV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 66 CTCF Reverse Complement Reverse Complement Forward 1 19 0.565451 Consensus sequence (original motif): YDRCCASYAGRKGGCRSYV Consensus sequence (reverse complement motif): BMSMGCCYMCTKSTGGMHM Alignment: BMSMGCCYMCTKSTGGMHM- VCTSTGKSCMKBCTRCYCTK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 59 ESR2 Original Motif Reverse Complement Backward 1 18 1.04822 Consensus sequence (original motif): VHRGGTCABDBTGMCCTB Consensus sequence (reverse complement motif): BAGGYCABHBTGACCKHV Alignment: --BAGGYCABHBTGACCKHV RAGKGMAGVRRGSRCASAGV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 90 TFM2 Reverse Complement Original Motif Backward 1 18 1.04851 Consensus sequence (original motif): CHHCHBTCCTSCYTCTGC Consensus sequence (reverse complement motif): GCAGAKGSAGGABDGHDG Alignment: --CHHCHBTCCTSCYTCTGC VCTSTGKSCMKBCTRCYCTK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 TgTGgTGTCACAGTGCTCC Reverse Complement Original Motif Forward 2 18 1.06391 Consensus sequence (original motif): TGTGGTGTCACAGTGCTCC Consensus sequence (reverse complement motif): GGAGCACTGTGACACCACA Alignment: TGTGGTGTCACAGTGCTCC-- -VCTSTGKSCMKBCTRCYCTK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 94 TFM13 Original Motif Reverse Complement Forward 3 18 1.06828 Consensus sequence (original motif): TTTTTTTKTTKTTTAATTHW Consensus sequence (reverse complement motif): WHAATTAAARAARAAAAAAA Alignment: WHAATTAAARAARAAAAAAA-- --RAGKGMAGVRRGSRCASAGV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 71 AmTGTGACACCACAGT Original Motif Original Motif Backward 1 16 2.06801 Consensus sequence (original motif): AMTGTGACACCACAGT Consensus sequence (reverse complement motif): ACTGTGGTGTCACART Alignment: ----AMTGTGACACCACAGT RAGKGMAGVRRGSRCASAGV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 94 Motif name: TFM13 Consensus sequence (original motif): TTTTTTTKTTKTTTAATTHW Consensus sequence (reverse complement motif): WHAATTAAARAARAAAAAAA ************************************************************************ Best Matches for Motif ID 94 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 92 TFM11 Reverse Complement Original Motif Backward 2 19 0.0813331 Consensus sequence (original motif): CAMACACACACAYDCACACA Consensus sequence (reverse complement motif): TGTGTGDKTGTGTGTGTRTG Alignment: -CAMACACACACAYDCACACA WHAATTAAARAARAAAAAAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 91 TFM3 Original Motif Original Motif Forward 1 18 0.520337 Consensus sequence (original motif): KTTTTTTKTTTTTTDAAB Consensus sequence (reverse complement motif): BTTHAAAAAAYAAAAAAR Alignment: KTTTTTTKTTTTTTDAAB-- TTTTTTTKTTKTTTAATTHW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 93 TFM12 Original Motif Reverse Complement Backward 3 18 0.585681 Consensus sequence (original motif): RAGKGMAGVRRGSRCASAGV Consensus sequence (reverse complement motif): VCTSTGKSCMKBCTRCYCTK Alignment: --VCTSTGKSCMKBCTRCYCTK TTTTTTTKTTKTTTAATTHW-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 5 89 TFM1 Reverse Complement Original Motif Forward 4 15 2.08869 Consensus sequence (original motif): CACACACACACWCACACA Consensus sequence (reverse complement motif): TGTGTGWGTGTGTGTGTG Alignment: CACACACACACWCACACA----- ---WHAATTAAARAARAAAAAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 2 49 Motif 49 Reverse Complement Original Motif Forward 1 14 2.51913 Consensus sequence (original motif): AAAAAAAAAAAAAT Consensus sequence (reverse complement motif): ATTTTTTTTTTTTT Alignment: AAAAAAAAAAAAAT------ WHAATTAAARAARAAAAAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 4 Motif 4 Original Motif Reverse Complement Backward 1 14 2.53469 Consensus sequence (original motif): HAAAAHAAARMAAA Consensus sequence (reverse complement motif): TTTRKTTTHTTTTH Alignment: ------TTTRKTTTHTTTTH TTTTTTTKTTKTTTAATTHW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 33 Motif 33 Original Motif Original Motif Forward 1 14 2.5727 Consensus sequence (original motif): TTTAATGTYTTTWA Consensus sequence (reverse complement motif): TWAAAKACATTAAA Alignment: TTTAATGTYTTTWA------ TTTTTTTKTTKTTTAATTHW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 4 67 TgTGgTGTCACAGTGCTCC Original Motif Original Motif Backward 6 14 2.5844 Consensus sequence (original motif): TGTGGTGTCACAGTGCTCC Consensus sequence (reverse complement motif): GGAGCACTGTGACACCACA Alignment: ------TGTGGTGTCACAGTGCTCC TTTTTTTKTTKTTTAATTHW----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 45 Motif 45 Reverse Complement Reverse Complement Backward 1 14 2.58546 Consensus sequence (original motif): TAASTCTWTTTTAA Consensus sequence (reverse complement motif): TTAAAAWAGASTTA Alignment: ------TTAAAAWAGASTTA WHAATTAAARAARAAAAAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 3 64 PPARGRXRA Original Motif Reverse Complement Forward 2 14 2.58746 Consensus sequence (original motif): BTRGGDCARAGGKCA Consensus sequence (reverse complement motif): TGRCCTKTGHCCKAB Alignment: TGRCCTKTGHCCKAB------ -TTTTTTTKTTKTTTAATTHW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Results created by MOTIFSIM on 09-23-2015 12:07:36 Runtime: 137.654 seconds. MOTIFSIM is written by Ngoc Tam L. Tran