MOTIFSIM - MOTIF SIMilarity Detection Tool

Version 2.0

INPUT

Input Parameters
Number of files: 4
Number of top significant motifs: 10
Number of best matches: 5
Similarity cutoff >= 0.75
Output file type: All
Output file format: All

Input files and motif counts
File name Count of motifs Dataset number
DREME_DM254.txt 45 1
MEME-CHIP_DM254.txt 24 2
PScanChIP_DM254.txt 63 3
RSAT_peak-motifs_DM254.txt 39 4

RESULTS

Top 10 Significant Motifs - Global Matching (Highest to Lowest)

Dataset #: 2 Motif ID: 46 Motif name: Motif 46

Original motif     Consensus sequence: AGRKGGCR Reverse complement motif     Consensus sequence: KGCCYKCT

Best Matches for Top Significant Motif ID 46 (Highest to Lowest)

Dataset #: 1
Motif ID: 1
Motif name: Motif 1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0

Alignment:
AGRKGGCR
AGRKGGCR

Original motif     Consensus sequence: AGRKGGCR Reverse complement motif     Consensus sequence: KGCCYKCT


Dataset #: 4
Motif ID: 147
Motif name: asCAGrkGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.00651548

Alignment:
ASCAGRGGGCRSB
---AGRKGGCR--

Original motif     Consensus sequence: ASCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCMCTGST


Dataset #: 4
Motif ID: 165
Motif name: wgGCCAshAGrGGGCrsy
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 9
Number of overlap: 8
Similarity score: 0.0102443

Alignment:
KBKGCCCKCTHGTGGCHH
--KGCCYKCT--------

Original motif     Consensus sequence: HDGCCACHAGRGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCKCTHGTGGCHH


Dataset #: 4
Motif ID: 166
Motif name: CasCAGrGGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0104954

Alignment:
CACCAGRGGGCRSB
----AGRKGGCR--

Original motif     Consensus sequence: CACCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCKCTGGTG


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0165822

Alignment:
KBKGCCCTCTYCTGGCCHV
--KGCCYKCT---------

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 1 Motif ID: 8 Motif name: Motif 8

Original motif     Consensus sequence: AAATAH Reverse complement motif     Consensus sequence: DTATTT

Best Matches for Top Significant Motif ID 8 (Highest to Lowest)

Dataset #: 4
Motif ID: 150
Motif name: waATwAAAATAww
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.00224204

Alignment:
DHATWAAAATAHD
------AAATAH-

Original motif     Consensus sequence: DHATWAAAATAHD Reverse complement motif     Consensus sequence: DHTATTTTWATHD


Dataset #: 4
Motif ID: 157
Motif name: wtATTTTTAww
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.00556446

Alignment:
WWTAAAAATAD
-----AAATAH

Original motif     Consensus sequence: DTATTTTTAWW Reverse complement motif     Consensus sequence: WWTAAAAATAD


Dataset #: 2
Motif ID: 68
Motif name: Motif 68
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 6
Similarity score: 0.0128826

Alignment:
WAAWAAAWAWWWAA
----AAATAH----

Original motif     Consensus sequence: WAAWAAAWAWWWAA Reverse complement motif     Consensus sequence: TTWWWTWTTTWTTW


Dataset #: 2
Motif ID: 52
Motif name: Motif 52
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0.0167304

Alignment:
AAATAAAW
AAATAH--

Original motif     Consensus sequence: AAATAAAW Reverse complement motif     Consensus sequence: WTTTATTT


Dataset #: 3
Motif ID: 118
Motif name: SRF
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.0210491

Alignment:
GCCCATATATGG
----AAATAH--

Original motif     Consensus sequence: GCCCATATATGG Reverse complement motif     Consensus sequence: CCATATATGGGC


Dataset #: 1 Motif ID: 20 Motif name: Motif 20

Original motif     Consensus sequence: CACGTR Reverse complement motif     Consensus sequence: MACGTG

Best Matches for Top Significant Motif ID 20 (Highest to Lowest)

Dataset #: 3
Motif ID: 71
Motif name: Arnt
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0

Alignment:
CACGTG
CACGTR

Original motif     Consensus sequence: CACGTG Reverse complement motif     Consensus sequence: CACGTG


Dataset #: 3
Motif ID: 95
Motif name: MYCMAX
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.0102183

Alignment:
RASCACGTGGT
---MACGTG--

Original motif     Consensus sequence: RASCACGTGGT Reverse complement motif     Consensus sequence: ACCACGTGSTM


Dataset #: 3
Motif ID: 91
Motif name: MAX
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.011152

Alignment:
DAHCACGTGD
---MACGTG-

Original motif     Consensus sequence: DAHCACGTGD Reverse complement motif     Consensus sequence: BCACGTGDTD


Dataset #: 3
Motif ID: 126
Motif name: USF1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.0131944

Alignment:
CACGTGR
MACGTG-

Original motif     Consensus sequence: CACGTGR Reverse complement motif     Consensus sequence: MCACGTG


Dataset #: 3
Motif ID: 94
Motif name: Myc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.0253396

Alignment:
DCCACGTGCV
--CACGTR--

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV


Dataset #: 1 Motif ID: 1 Motif name: Motif 1

Original motif     Consensus sequence: AGRKGGCR Reverse complement motif     Consensus sequence: KGCCYKCT

Best Matches for Top Significant Motif ID 1 (Highest to Lowest)

Dataset #: 2
Motif ID: 46
Motif name: Motif 46
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0

Alignment:
AGRKGGCR
AGRKGGCR

Original motif     Consensus sequence: AGRKGGCR Reverse complement motif     Consensus sequence: KGCCYKCT


Dataset #: 4
Motif ID: 147
Motif name: asCAGrkGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.00628523

Alignment:
ASCAGRGGGCRSB
---AGRKGGCR--

Original motif     Consensus sequence: ASCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCMCTGST


Dataset #: 4
Motif ID: 165
Motif name: wgGCCAshAGrGGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0102152

Alignment:
HDGCCACHAGRGGGCRBY
--------AGRKGGCR--

Original motif     Consensus sequence: HDGCCACHAGRGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCKCTHGTGGCHH


Dataset #: 4
Motif ID: 166
Motif name: CasCAGrGGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0106761

Alignment:
CACCAGRGGGCRSB
----AGRKGGCR--

Original motif     Consensus sequence: CACCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCKCTGGTG


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.016658

Alignment:
KBKGCCCTCTYCTGGCCHV
--KGCCYKCT---------

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 4
Motif ID: 164
Motif name: asyAGrkGGCRGCAga
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0201849

Alignment:
ASYAGRKGGCAGCABH
---AGRKGGCR-----

Original motif     Consensus sequence: ASYAGRKGGCAGCABH Reverse complement motif     Consensus sequence: HBTGCTGCCYMCTKST


Dataset #: 3 Motif ID: 127 Motif name: YY1

Original motif     Consensus sequence: RCCATB Reverse complement motif     Consensus sequence: BATGGM

Best Matches for Top Significant Motif ID 127 (Highest to Lowest)

Dataset #: 2
Motif ID: 61
Motif name: Motif 61
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.00122549

Alignment:
AGATGGY
BATGGM-

Original motif     Consensus sequence: AGATGGY Reverse complement motif     Consensus sequence: KCCATCT


Dataset #: 1
Motif ID: 12
Motif name: Motif 12
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.00857843

Alignment:
GAGCCATC
RCCATB--

Original motif     Consensus sequence: GATGGCTC Reverse complement motif     Consensus sequence: GAGCCATC


Dataset #: 4
Motif ID: 145
Motif name: grCCACyAGAkG
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.022036

Alignment:
CYTCTKGTGGHH
-----BATGGM-

Original motif     Consensus sequence: DDCCACYAGAKG Reverse complement motif     Consensus sequence: CYTCTKGTGGHH


Dataset #: 4
Motif ID: 138
Motif name: grCCACyAGAkG
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.0223679

Alignment:
DDCCACYAGAKG
-RCCATB-----

Original motif     Consensus sequence: DDCCACYAGAKG Reverse complement motif     Consensus sequence: CYTCTMGTGGHH


Dataset #: 4
Motif ID: 156
Motif name: rgyGCCMyCTksTGGccd
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 6
Similarity score: 0.0275501

Alignment:
DDGCCASYAGMGGGCKVM
--RCCATB----------

Original motif     Consensus sequence: RVYGCCCYCTKSTGGCHD Reverse complement motif     Consensus sequence: DDGCCASYAGMGGGCKVM


Dataset #: 2 Motif ID: 48 Motif name: Motif 48

Original motif     Consensus sequence: CCACYAGR Reverse complement motif     Consensus sequence: MCTKGTGG

Best Matches for Top Significant Motif ID 48 (Highest to Lowest)

Dataset #: 1
Motif ID: 21
Motif name: Motif 21
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.00903109

Alignment:
CCACYAGG
CCACYAGR

Original motif     Consensus sequence: CCACYAGG Reverse complement motif     Consensus sequence: CCTKGTGG


Dataset #: 4
Motif ID: 145
Motif name: grCCACyAGAkG
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0155354

Alignment:
DDCCACYAGAKG
--CCACYAGR--

Original motif     Consensus sequence: DDCCACYAGAKG Reverse complement motif     Consensus sequence: CYTCTKGTGGHH


Dataset #: 4
Motif ID: 158
Motif name: grCCACwAGrk
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0192652

Alignment:
DDCCACWAGRK
--CCACYAGR-

Original motif     Consensus sequence: DDCCACWAGRK Reverse complement motif     Consensus sequence: YMCTWGTGGHH


Dataset #: 4
Motif ID: 138
Motif name: grCCACyAGAkG
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0244381

Alignment:
DDCCACYAGAKG
--CCACYAGR--

Original motif     Consensus sequence: DDCCACYAGAKG Reverse complement motif     Consensus sequence: CYTCTMGTGGHH


Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 9
Number of overlap: 8
Similarity score: 0.0284404

Alignment:
YDRCCASYAGRKGGCRSYV
---CCACYAGR--------

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 2 Motif ID: 65 Motif name: Motif 65

Original motif     Consensus sequence: ARAACA Reverse complement motif     Consensus sequence: TGTTMT

Best Matches for Top Significant Motif ID 65 (Highest to Lowest)

Dataset #: 4
Motif ID: 141
Motif name: raCAAAACam
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.00122368

Alignment:
DACAAAACAH
---ARAACA-

Original motif     Consensus sequence: DACAAAACAH Reverse complement motif     Consensus sequence: HTGTTTTGTD


Dataset #: 1
Motif ID: 44
Motif name: Motif 44
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.0101983

Alignment:
GDAAACA
-ARAACA

Original motif     Consensus sequence: GDAAACA Reverse complement motif     Consensus sequence: TGTTTDC


Dataset #: 4
Motif ID: 159
Motif name: kkAAGAGCAsy
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 6
Similarity score: 0.0232212

Alignment:
HVTGCTCTTBH
--TGTTMT---

Original motif     Consensus sequence: DBAAGAGCAVH Reverse complement motif     Consensus sequence: HVTGCTCTTBH


Dataset #: 3
Motif ID: 121
Motif name: TAL1TCF3
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 7
Number of overlap: 6
Similarity score: 0.0330056

Alignment:
HVAMCATCTGKT
ARAACA------

Original motif     Consensus sequence: HVAMCATCTGKT Reverse complement motif     Consensus sequence: ARCAGATGRTVD


Dataset #: 1
Motif ID: 2
Motif name: Motif 2
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.0333069

Alignment:
AAAAHAAA
ARAACA--

Original motif     Consensus sequence: AAAAHAAA Reverse complement motif     Consensus sequence: TTTDTTTT


Dataset #: 1 Motif ID: 5 Motif name: Motif 5

Original motif     Consensus sequence: CCCCDCCC Reverse complement motif     Consensus sequence: GGGDGGGG

Best Matches for Top Significant Motif ID 5 (Highest to Lowest)

Dataset #: 2
Motif ID: 59
Motif name: Motif 59
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.00363191

Alignment:
CCCCRCCC
CCCCDCCC

Original motif     Consensus sequence: CCCCRCCC Reverse complement motif     Consensus sequence: GGGKGGGG


Dataset #: 4
Motif ID: 155
Motif name: csCSCCdCCCcs
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.00464015

Alignment:
VBCCCCDCCCHV
--CCCCDCCC--

Original motif     Consensus sequence: VBCCCCDCCCHV Reverse complement motif     Consensus sequence: VDGGGDGGGGBV


Dataset #: 3
Motif ID: 89
Motif name: Klf4
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0352587

Alignment:
GCCYCMCCCD
-CCCCDCCC-

Original motif     Consensus sequence: DGGGYGKGGC Reverse complement motif     Consensus sequence: GCCYCMCCCD


Dataset #: 4
Motif ID: 154
Motif name: csCsCCTCCcc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0361349

Alignment:
VBCCCCTCCHB
--CCCCDCCC-

Original motif     Consensus sequence: VBCCCCTCCHB Reverse complement motif     Consensus sequence: BDGGAGGGGBV


Dataset #: 3
Motif ID: 116
Motif name: SP1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0368066

Alignment:
CCCCKCCCCC
CCCCDCCC--

Original motif     Consensus sequence: CCCCKCCCCC Reverse complement motif     Consensus sequence: GGGGGYGGGG


Dataset #: 3 Motif ID: 72 Motif name: ArntAhr

Original motif     Consensus sequence: YGCGTG Reverse complement motif     Consensus sequence: CACGCM

Best Matches for Top Significant Motif ID 72 (Highest to Lowest)

Dataset #: 4
Motif ID: 134
Motif name: ssCGwGCGss
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 6
Similarity score: 0.0128947

Alignment:
BSCGWGCGBV
YGCGTG----

Original motif     Consensus sequence: BSCGWGCGBV Reverse complement motif     Consensus sequence: VBCGCWCGSB


Dataset #: 1
Motif ID: 20
Motif name: Motif 20
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0.0206428

Alignment:
MACGTG
YGCGTG

Original motif     Consensus sequence: CACGTR Reverse complement motif     Consensus sequence: MACGTG


Dataset #: 1
Motif ID: 42
Motif name: Motif 42
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.0259081

Alignment:
CGCGCSG
-CACGCM

Original motif     Consensus sequence: CGCGCSG Reverse complement motif     Consensus sequence: CSGCGCG


Dataset #: 4
Motif ID: 152
Motif name: yrCATGCAyr
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 6
Similarity score: 0.0279287

Alignment:
BRCATGCABD
--CACGCM--

Original motif     Consensus sequence: BRCATGCABD Reverse complement motif     Consensus sequence: HVTGCATGKV


Dataset #: 2
Motif ID: 57
Motif name: Motif 57
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.0315171

Alignment:
ACACACAY
-CACGCM-

Original motif     Consensus sequence: ACACACAY Reverse complement motif     Consensus sequence: KTGTGTGT


Dataset #: 3 Motif ID: 101 Motif name: NFIC

Original motif     Consensus sequence: TTGGCD Reverse complement motif     Consensus sequence: DGCCAA

Best Matches for Top Significant Motif ID 101 (Highest to Lowest)

Dataset #: 4
Motif ID: 165
Motif name: wgGCCAshAGrGGGCrsy
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 12
Number of overlap: 6
Similarity score: 0.0215379

Alignment:
HDGCCACHAGRGGGCRBY
-DGCCAA-----------

Original motif     Consensus sequence: HDGCCACHAGRGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCKCTHGTGGCHH


Dataset #: 4
Motif ID: 156
Motif name: rgyGCCMyCTksTGGccd
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 12
Number of overlap: 6
Similarity score: 0.026631

Alignment:
DDGCCASYAGMGGGCKVM
-DGCCAA-----------

Original motif     Consensus sequence: RVYGCCCYCTKSTGGCHD Reverse complement motif     Consensus sequence: DDGCCASYAGMGGGCKVM


Dataset #: 4
Motif ID: 151
Motif name: agrCCAGmAGrg
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.0273632

Alignment:
CKCTRCTGGCVH
-----TTGGCD-

Original motif     Consensus sequence: HVGCCAGMAGRG Reverse complement motif     Consensus sequence: CKCTRCTGGCVH


Dataset #: 1
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.0280507

Alignment:
SWGCCACC
-DGCCAA-

Original motif     Consensus sequence: GGTGGCWS Reverse complement motif     Consensus sequence: SWGCCACC


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.0280858

Alignment:
KBKGCCCTCTYCTGGCCHV
-----------TTGGCD--

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV



Significant Motifs - Global and Local Matching (Highest to Lowest)

Dataset #: 3 Motif ID: 71 Motif name: Arnt

Original motif     Consensus sequence: CACGTG Reverse complement motif     Consensus sequence: CACGTG

Best Matches for Significant Motif ID 71 (Highest to Lowest)

Dataset #: 1
Motif ID: 20
Motif name: Motif 20
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0

Alignment:
MACGTG
CACGTG

Original motif     Consensus sequence: CACGTR Reverse complement motif     Consensus sequence: MACGTG


Dataset #: 3
Motif ID: 91
Motif name: MAX
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.00380329

Alignment:
BCACGTGDTD
-CACGTG---

Original motif     Consensus sequence: DAHCACGTGD Reverse complement motif     Consensus sequence: BCACGTGDTD


Dataset #: 3
Motif ID: 126
Motif name: USF1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.00445689

Alignment:
MCACGTG
-CACGTG

Original motif     Consensus sequence: CACGTGR Reverse complement motif     Consensus sequence: MCACGTG


Dataset #: 3
Motif ID: 95
Motif name: MYCMAX
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 6
Similarity score: 0.00495292

Alignment:
RASCACGTGGT
---CACGTG--

Original motif     Consensus sequence: RASCACGTGGT Reverse complement motif     Consensus sequence: ACCACGTGSTM


Dataset #: 3
Motif ID: 94
Motif name: Myc
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.0173209

Alignment:
DCCACGTGCV
--CACGTG--

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV


Dataset #: 2 Motif ID: 46 Motif name: Motif 46

Original motif     Consensus sequence: AGRKGGCR Reverse complement motif     Consensus sequence: KGCCYKCT

Best Matches for Significant Motif ID 46 (Highest to Lowest)

Dataset #: 1
Motif ID: 1
Motif name: Motif 1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0

Alignment:
AGRKGGCR
AGRKGGCR

Original motif     Consensus sequence: AGRKGGCR Reverse complement motif     Consensus sequence: KGCCYKCT


Dataset #: 4
Motif ID: 147
Motif name: asCAGrkGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.00651548

Alignment:
ASCAGRGGGCRSB
---AGRKGGCR--

Original motif     Consensus sequence: ASCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCMCTGST


Dataset #: 4
Motif ID: 165
Motif name: wgGCCAshAGrGGGCrsy
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 9
Number of overlap: 8
Similarity score: 0.0102443

Alignment:
KBKGCCCKCTHGTGGCHH
--KGCCYKCT--------

Original motif     Consensus sequence: HDGCCACHAGRGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCKCTHGTGGCHH


Dataset #: 4
Motif ID: 166
Motif name: CasCAGrGGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.0104954

Alignment:
CACCAGRGGGCRSB
----AGRKGGCR--

Original motif     Consensus sequence: CACCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCKCTGGTG


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0165822

Alignment:
KBKGCCCTCTYCTGGCCHV
--KGCCYKCT---------

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 4 Motif ID: 133 Motif name: shAGrGGGCAgy

Original motif     Consensus sequence: SHAGRGGGCABH Reverse complement motif     Consensus sequence: DBTGCCCKCTDS

Best Matches for Significant Motif ID 133 (Highest to Lowest)

Dataset #: 4
Motif ID: 165
Motif name: wgGCCAshAGrGGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 7
Number of overlap: 12
Similarity score: 0.00159897

Alignment:
HDGCCACHAGRGGGCRBY
------SHAGRGGGCABH

Original motif     Consensus sequence: HDGCCACHAGRGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCKCTHGTGGCHH


Dataset #: 4
Motif ID: 143
Motif name: AgmAGAGGGCrscAGak
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 12
Similarity score: 0.00815796

Alignment:
AGMAGAGGGCASCAGAK
-SHAGRGGGCABH----

Original motif     Consensus sequence: AGMAGAGGGCASCAGAK Reverse complement motif     Consensus sequence: RTCTGSTGCCCTCTYCT


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 8
Number of overlap: 12
Similarity score: 0.0109424

Alignment:
VHGGCCAGMAGAGGGCRBY
-------SHAGRGGGCABH

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 4
Motif ID: 166
Motif name: CasCAGrGGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.0124424

Alignment:
CACCAGRGGGCRSB
--SHAGRGGGCABH

Original motif     Consensus sequence: CACCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCKCTGGTG


Dataset #: 4
Motif ID: 147
Motif name: asCAGrkGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 12
Similarity score: 0.0128393

Alignment:
ASCAGRGGGCRSB
-SHAGRGGGCABH

Original motif     Consensus sequence: ASCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCMCTGST


Dataset #: 1 Motif ID: 8 Motif name: Motif 8

Original motif     Consensus sequence: AAATAH Reverse complement motif     Consensus sequence: DTATTT

Best Matches for Significant Motif ID 8 (Highest to Lowest)

Dataset #: 4
Motif ID: 150
Motif name: waATwAAAATAww
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.00224204

Alignment:
DHATWAAAATAHD
------AAATAH-

Original motif     Consensus sequence: DHATWAAAATAHD Reverse complement motif     Consensus sequence: DHTATTTTWATHD


Dataset #: 4
Motif ID: 157
Motif name: wtATTTTTAww
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.00556446

Alignment:
WWTAAAAATAD
-----AAATAH

Original motif     Consensus sequence: DTATTTTTAWW Reverse complement motif     Consensus sequence: WWTAAAAATAD


Dataset #: 2
Motif ID: 68
Motif name: Motif 68
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 6
Similarity score: 0.0128826

Alignment:
WAAWAAAWAWWWAA
----AAATAH----

Original motif     Consensus sequence: WAAWAAAWAWWWAA Reverse complement motif     Consensus sequence: TTWWWTWTTTWTTW


Dataset #: 2
Motif ID: 52
Motif name: Motif 52
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0.0167304

Alignment:
AAATAAAW
AAATAH--

Original motif     Consensus sequence: AAATAAAW Reverse complement motif     Consensus sequence: WTTTATTT


Dataset #: 3
Motif ID: 118
Motif name: SRF
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.0210491

Alignment:
GCCCATATATGG
----AAATAH--

Original motif     Consensus sequence: GCCCATATATGG Reverse complement motif     Consensus sequence: CCATATATGGGC


Dataset #: 4 Motif ID: 153 Motif name: scAGrkGGCGcy

Original motif     Consensus sequence: SHAGRGGGCGCB Reverse complement motif     Consensus sequence: VGCGCCCMCTDS

Best Matches for Significant Motif ID 153 (Highest to Lowest)

Dataset #: 4
Motif ID: 137
Motif name: rgCGCCmyCTgs
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0

Alignment:
SHAGKGGGCGCB
SHAGRGGGCGCB

Original motif     Consensus sequence: VGCGCCCYCTDS Reverse complement motif     Consensus sequence: SHAGKGGGCGCB


Dataset #: 4
Motif ID: 147
Motif name: asCAGrkGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 12
Similarity score: 0.0112071

Alignment:
ASCAGRGGGCRSB
-SHAGRGGGCGCB

Original motif     Consensus sequence: ASCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCMCTGST


Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 7
Number of overlap: 12
Similarity score: 0.0133899

Alignment:
YDRCCASYAGRKGGCRSYV
------SHAGRGGGCGCB-

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 4
Motif ID: 165
Motif name: wgGCCAshAGrGGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.0146442

Alignment:
HDGCCACHAGRGGGCRBY
------SHAGRGGGCGCB

Original motif     Consensus sequence: HDGCCACHAGRGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCKCTHGTGGCHH


Dataset #: 4
Motif ID: 166
Motif name: CasCAGrGGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 12
Similarity score: 0.0200811

Alignment:
CACCAGRGGGCRSB
--SHAGRGGGCGCB

Original motif     Consensus sequence: CACCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCKCTGGTG


Dataset #: 1 Motif ID: 20 Motif name: Motif 20

Original motif     Consensus sequence: CACGTR Reverse complement motif     Consensus sequence: MACGTG

Best Matches for Significant Motif ID 20 (Highest to Lowest)

Dataset #: 3
Motif ID: 71
Motif name: Arnt
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0

Alignment:
CACGTG
CACGTR

Original motif     Consensus sequence: CACGTG Reverse complement motif     Consensus sequence: CACGTG


Dataset #: 3
Motif ID: 95
Motif name: MYCMAX
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.0102183

Alignment:
RASCACGTGGT
---MACGTG--

Original motif     Consensus sequence: RASCACGTGGT Reverse complement motif     Consensus sequence: ACCACGTGSTM


Dataset #: 3
Motif ID: 91
Motif name: MAX
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.011152

Alignment:
DAHCACGTGD
---MACGTG-

Original motif     Consensus sequence: DAHCACGTGD Reverse complement motif     Consensus sequence: BCACGTGDTD


Dataset #: 3
Motif ID: 126
Motif name: USF1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.0131944

Alignment:
CACGTGR
MACGTG-

Original motif     Consensus sequence: CACGTGR Reverse complement motif     Consensus sequence: MCACGTG


Dataset #: 3
Motif ID: 94
Motif name: Myc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.0253396

Alignment:
DCCACGTGCV
--CACGTR--

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV


Dataset #: 1 Motif ID: 1 Motif name: Motif 1

Original motif     Consensus sequence: AGRKGGCR Reverse complement motif     Consensus sequence: KGCCYKCT

Best Matches for Significant Motif ID 1 (Highest to Lowest)

Dataset #: 2
Motif ID: 46
Motif name: Motif 46
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0

Alignment:
AGRKGGCR
AGRKGGCR

Original motif     Consensus sequence: AGRKGGCR Reverse complement motif     Consensus sequence: KGCCYKCT


Dataset #: 4
Motif ID: 147
Motif name: asCAGrkGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.00628523

Alignment:
ASCAGRGGGCRSB
---AGRKGGCR--

Original motif     Consensus sequence: ASCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCMCTGST


Dataset #: 4
Motif ID: 165
Motif name: wgGCCAshAGrGGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0102152

Alignment:
HDGCCACHAGRGGGCRBY
--------AGRKGGCR--

Original motif     Consensus sequence: HDGCCACHAGRGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCKCTHGTGGCHH


Dataset #: 4
Motif ID: 166
Motif name: CasCAGrGGGCrsy
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0106761

Alignment:
BSKGCCCKCTGGTG
--KGCCYKCT----

Original motif     Consensus sequence: CACCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCKCTGGTG


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.016658

Alignment:
KBKGCCCTCTYCTGGCCHV
--KGCCYKCT---------

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 4
Motif ID: 164
Motif name: asyAGrkGGCRGCAga
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0201849

Alignment:
ASYAGRKGGCAGCABH
---AGRKGGCR-----

Original motif     Consensus sequence: ASYAGRKGGCAGCABH Reverse complement motif     Consensus sequence: HBTGCTGCCYMCTKST


Dataset #: 4 Motif ID: 136 Motif name: dwCAGAAGwh

Original motif     Consensus sequence: DHCAGAAGDH Reverse complement motif     Consensus sequence: HDCTTCTGHD

Best Matches for Significant Motif ID 136 (Highest to Lowest)

Dataset #: 4
Motif ID: 151
Motif name: agrCCAGmAGrg
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 10
Similarity score: 0.00562474

Alignment:
HVGCCAGMAGRG
--DHCAGAAGDH

Original motif     Consensus sequence: HVGCCAGMAGRG Reverse complement motif     Consensus sequence: CKCTRCTGGCVH


Dataset #: 4
Motif ID: 141
Motif name: raCAAAACam
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0107169

Alignment:
DACAAAACAH
DHCAGAAGDH

Original motif     Consensus sequence: DACAAAACAH Reverse complement motif     Consensus sequence: HTGTTTTGTD


Dataset #: 4
Motif ID: 158
Motif name: grCCACwAGrk
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0167426

Alignment:
DDCCACWAGRK
-DHCAGAAGDH

Original motif     Consensus sequence: DDCCACWAGRK Reverse complement motif     Consensus sequence: YMCTWGTGGHH


Dataset #: 4
Motif ID: 139
Motif name: mkCTyTTCsg
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0207259

Alignment:
HBCTTTTCBD
HDCTTCTGHD

Original motif     Consensus sequence: HBCTTTTCBD Reverse complement motif     Consensus sequence: HBGAAAAGBD


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 10
Similarity score: 0.0212719

Alignment:
VHGGCCAGMAGAGGGCRBY
---DHCAGAAGDH------

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 3 Motif ID: 127 Motif name: YY1

Original motif     Consensus sequence: RCCATB Reverse complement motif     Consensus sequence: BATGGM

Best Matches for Significant Motif ID 127 (Highest to Lowest)

Dataset #: 2
Motif ID: 61
Motif name: Motif 61
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.00122549

Alignment:
KCCATCT
-RCCATB

Original motif     Consensus sequence: AGATGGY Reverse complement motif     Consensus sequence: KCCATCT


Dataset #: 1
Motif ID: 12
Motif name: Motif 12
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.00857843

Alignment:
GATGGCTC
--BATGGM

Original motif     Consensus sequence: GATGGCTC Reverse complement motif     Consensus sequence: GAGCCATC


Dataset #: 4
Motif ID: 145
Motif name: grCCACyAGAkG
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.022036

Alignment:
CYTCTKGTGGHH
-----BATGGM-

Original motif     Consensus sequence: DDCCACYAGAKG Reverse complement motif     Consensus sequence: CYTCTKGTGGHH


Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.0220417

Alignment:
BMSMGCCYMCTKSTGGMHM
-----------BATGGM--

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 4
Motif ID: 138
Motif name: grCCACyAGAkG
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.0223679

Alignment:
DDCCACYAGAKG
-RCCATB-----

Original motif     Consensus sequence: DDCCACYAGAKG Reverse complement motif     Consensus sequence: CYTCTMGTGGHH


Dataset #: 3 Motif ID: 72 Motif name: ArntAhr

Original motif     Consensus sequence: YGCGTG Reverse complement motif     Consensus sequence: CACGCM

Best Matches for Significant Motif ID 72 (Highest to Lowest)

Dataset #: 3
Motif ID: 86
Motif name: HIF1AARNT
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0

Alignment:
VBACGTGV
-YGCGTG-

Original motif     Consensus sequence: VBACGTGV Reverse complement motif     Consensus sequence: VCACGTBV


Dataset #: 4
Motif ID: 134
Motif name: ssCGwGCGss
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 6
Similarity score: 0.0128947

Alignment:
BSCGWGCGBV
YGCGTG----

Original motif     Consensus sequence: BSCGWGCGBV Reverse complement motif     Consensus sequence: VBCGCWCGSB


Dataset #: 3
Motif ID: 71
Motif name: Arnt
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0.0203526

Alignment:
CACGTG
YGCGTG

Original motif     Consensus sequence: CACGTG Reverse complement motif     Consensus sequence: CACGTG


Dataset #: 1
Motif ID: 20
Motif name: Motif 20
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0.0206428

Alignment:
MACGTG
YGCGTG

Original motif     Consensus sequence: CACGTR Reverse complement motif     Consensus sequence: MACGTG


Dataset #: 3
Motif ID: 126
Motif name: USF1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.0255609

Alignment:
MCACGTG
-YGCGTG

Original motif     Consensus sequence: CACGTGR Reverse complement motif     Consensus sequence: MCACGTG



Best Matches for Each Motif (Highest to Lowest)

Dataset #: 1 Motif ID: 1 Motif name: Motif 1

Original motif     Consensus sequence: AGRKGGCR Reverse complement motif     Consensus sequence: KGCCYKCT

Best Matches for Motif ID 1 (Highest to Lowest)

Dataset #: 2
Motif ID: 46
Motif name: Motif 46
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0

Alignment:
AGRKGGCR
AGRKGGCR

Original motif     Consensus sequence: AGRKGGCR Reverse complement motif     Consensus sequence: KGCCYKCT


Dataset #: 4
Motif ID: 147
Motif name: asCAGrkGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.00628523

Alignment:
ASCAGRGGGCRSB
---AGRKGGCR--

Original motif     Consensus sequence: ASCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCMCTGST


Dataset #: 4
Motif ID: 165
Motif name: wgGCCAshAGrGGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0102152

Alignment:
HDGCCACHAGRGGGCRBY
--------AGRKGGCR--

Original motif     Consensus sequence: HDGCCACHAGRGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCKCTHGTGGCHH


Dataset #: 4
Motif ID: 166
Motif name: CasCAGrGGGCrsy
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0106761

Alignment:
BSKGCCCKCTGGTG
--KGCCYKCT----

Original motif     Consensus sequence: CACCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCKCTGGTG


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.016658

Alignment:
KBKGCCCTCTYCTGGCCHV
--KGCCYKCT---------

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 4
Motif ID: 164
Motif name: asyAGrkGGCRGCAga
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0201849

Alignment:
ASYAGRKGGCAGCABH
---AGRKGGCR-----

Original motif     Consensus sequence: ASYAGRKGGCAGCABH Reverse complement motif     Consensus sequence: HBTGCTGCCYMCTKST


Dataset #: 1 Motif ID: 2 Motif name: Motif 2

Original motif     Consensus sequence: AAAAHAAA Reverse complement motif     Consensus sequence: TTTDTTTT

Best Matches for Motif ID 2 (Highest to Lowest)

Dataset #: 2
Motif ID: 68
Motif name: Motif 68
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.034263

Alignment:
WAAWAAAWAWWWAA
---AAAAHAAA---

Original motif     Consensus sequence: WAAWAAAWAWWWAA Reverse complement motif     Consensus sequence: TTWWWTWTTTWTTW


Dataset #: 4
Motif ID: 150
Motif name: waATwAAAATAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 6
Number of overlap: 8
Similarity score: 0.061025

Alignment:
DHTATTTTWATHD
TTTDTTTT-----

Original motif     Consensus sequence: DHATWAAAATAHD Reverse complement motif     Consensus sequence: DHTATTTTWATHD


Dataset #: 2
Motif ID: 52
Motif name: Motif 52
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0613251

Alignment:
AAATAAAW
AAAAHAAA

Original motif     Consensus sequence: AAATAAAW Reverse complement motif     Consensus sequence: WTTTATTT


Dataset #: 4
Motif ID: 157
Motif name: wtATTTTTAww
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0669479

Alignment:
WWTAAAAATAD
AAAAHAAA---

Original motif     Consensus sequence: DTATTTTTAWW Reverse complement motif     Consensus sequence: WWTAAAAATAD


Dataset #: 4
Motif ID: 148
Motif name: wwTwAAAAww
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0808845

Alignment:
DDTWAAAAHH
AAAAHAAA--

Original motif     Consensus sequence: DDTWAAAAHH Reverse complement motif     Consensus sequence: HHTTTTWADD


Dataset #: 1 Motif ID: 3 Motif name: Motif 3

Original motif     Consensus sequence: CACACACA Reverse complement motif     Consensus sequence: TGTGTGTG

Best Matches for Motif ID 3 (Highest to Lowest)

Dataset #: 1
Motif ID: 24
Motif name: Motif 24
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0443933

Alignment:
CACCCACA
CACACACA

Original motif     Consensus sequence: TGTGGGTG Reverse complement motif     Consensus sequence: CACCCACA


Dataset #: 1
Motif ID: 31
Motif name: Motif 31
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0599548

Alignment:
CATGYACA
CACACACA

Original motif     Consensus sequence: CATGYACA Reverse complement motif     Consensus sequence: TGTKCATG


Dataset #: 3
Motif ID: 120
Motif name: T
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.065511

Alignment:
TTCACACCTAG
--CACACACA-

Original motif     Consensus sequence: CTAGGTGTGAA Reverse complement motif     Consensus sequence: TTCACACCTAG


Dataset #: 2
Motif ID: 64
Motif name: Motif 64
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0681512

Alignment:
CATATRCA
CACACACA

Original motif     Consensus sequence: CATATRCA Reverse complement motif     Consensus sequence: TGMATATG


Dataset #: 3
Motif ID: 114
Motif name: RUNX1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0795385

Alignment:
BBYTGTGGTTT
---TGTGTGTG

Original motif     Consensus sequence: BBYTGTGGTTT Reverse complement motif     Consensus sequence: AAACCACAKVB


Dataset #: 1 Motif ID: 4 Motif name: Motif 4

Original motif     Consensus sequence: TTTWWAW Reverse complement motif     Consensus sequence: WTWWAAA

Best Matches for Motif ID 4 (Highest to Lowest)

Dataset #: 4
Motif ID: 148
Motif name: wwTwAAAAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 7
Similarity score: 0.0204013

Alignment:
DDTWAAAAHH
-WTWWAAA--

Original motif     Consensus sequence: DDTWAAAAHH Reverse complement motif     Consensus sequence: HHTTTTWADD


Dataset #: 4
Motif ID: 150
Motif name: waATwAAAATAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 7
Similarity score: 0.0245609

Alignment:
DHATWAAAATAHD
--WTWWAAA----

Original motif     Consensus sequence: DHATWAAAATAHD Reverse complement motif     Consensus sequence: DHTATTTTWATHD


Dataset #: 4
Motif ID: 157
Motif name: wtATTTTTAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 7
Similarity score: 0.028753

Alignment:
WWTAAAAATAD
-WTWWAAA---

Original motif     Consensus sequence: DTATTTTTAWW Reverse complement motif     Consensus sequence: WWTAAAAATAD


Dataset #: 2
Motif ID: 68
Motif name: Motif 68
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 7
Similarity score: 0.048084

Alignment:
TTWWWTWTTTWTTW
-------TTTWWAW

Original motif     Consensus sequence: WAAWAAAWAWWWAA Reverse complement motif     Consensus sequence: TTWWWTWTTTWTTW


Dataset #: 2
Motif ID: 52
Motif name: Motif 52
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 7
Similarity score: 0.0637767

Alignment:
WTTTATTT
-TTTWWAW

Original motif     Consensus sequence: AAATAAAW Reverse complement motif     Consensus sequence: WTTTATTT


Dataset #: 1 Motif ID: 5 Motif name: Motif 5

Original motif     Consensus sequence: CCCCDCCC Reverse complement motif     Consensus sequence: GGGDGGGG

Best Matches for Motif ID 5 (Highest to Lowest)

Dataset #: 2
Motif ID: 59
Motif name: Motif 59
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.00363191

Alignment:
GGGKGGGG
GGGDGGGG

Original motif     Consensus sequence: CCCCRCCC Reverse complement motif     Consensus sequence: GGGKGGGG


Dataset #: 4
Motif ID: 155
Motif name: csCSCCdCCCcs
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.00464015

Alignment:
VDGGGDGGGGBV
--GGGDGGGG--

Original motif     Consensus sequence: VBCCCCDCCCHV Reverse complement motif     Consensus sequence: VDGGGDGGGGBV


Dataset #: 3
Motif ID: 89
Motif name: Klf4
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0352587

Alignment:
GCCYCMCCCD
-CCCCDCCC-

Original motif     Consensus sequence: DGGGYGKGGC Reverse complement motif     Consensus sequence: GCCYCMCCCD


Dataset #: 4
Motif ID: 154
Motif name: csCsCCTCCcc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0361349

Alignment:
VBCCCCTCCHB
--CCCCDCCC-

Original motif     Consensus sequence: VBCCCCTCCHB Reverse complement motif     Consensus sequence: BDGGAGGGGBV


Dataset #: 3
Motif ID: 116
Motif name: SP1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0368066

Alignment:
CCCCKCCCCC
CCCCDCCC--

Original motif     Consensus sequence: CCCCKCCCCC Reverse complement motif     Consensus sequence: GGGGGYGGGG


Dataset #: 1 Motif ID: 6 Motif name: Motif 6

Original motif     Consensus sequence: CTGGRRA Reverse complement motif     Consensus sequence: TMMCCAG

Best Matches for Motif ID 6 (Highest to Lowest)

Dataset #: 1
Motif ID: 40
Motif name: Motif 40
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 7
Similarity score: 0.0326828

Alignment:
CTGGGAMT
CTGGRRA-

Original motif     Consensus sequence: ARTCCCAG Reverse complement motif     Consensus sequence: CTGGGAMT


Dataset #: 2
Motif ID: 69
Motif name: Motif 69
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 7
Number of overlap: 7
Similarity score: 0.0472643

Alignment:
CCTGGARCTGGAGT
-CTGGRRA------

Original motif     Consensus sequence: CCTGGARCTGGAGT Reverse complement motif     Consensus sequence: ACTCCAGMTCCAGG


Dataset #: 3
Motif ID: 85
Motif name: Hand1Tcfe2a
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 7
Similarity score: 0.0513687

Alignment:
BRTCTGGMWT
---CTGGRRA

Original motif     Consensus sequence: BRTCTGGMWT Reverse complement motif     Consensus sequence: AWRCCAGAMB


Dataset #: 4
Motif ID: 151
Motif name: agrCCAGmAGrg
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 6
Number of overlap: 7
Similarity score: 0.0514331

Alignment:
CKCTRCTGGCVH
-----CTGGRRA

Original motif     Consensus sequence: HVGCCAGMAGRG Reverse complement motif     Consensus sequence: CKCTRCTGGCVH


Dataset #: 1
Motif ID: 33
Motif name: Motif 33
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 7
Similarity score: 0.0553656

Alignment:
GWAGCCAG
-TMMCCAG

Original motif     Consensus sequence: CTGGCTWC Reverse complement motif     Consensus sequence: GWAGCCAG


Dataset #: 1 Motif ID: 7 Motif name: Motif 7

Original motif     Consensus sequence: AGRAAA Reverse complement motif     Consensus sequence: TTTMCT

Best Matches for Motif ID 7 (Highest to Lowest)

Dataset #: 1
Motif ID: 2
Motif name: Motif 2
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0.0617932

Alignment:
TTTDTTTT
TTTMCT--

Original motif     Consensus sequence: AAAAHAAA Reverse complement motif     Consensus sequence: TTTDTTTT


Dataset #: 2
Motif ID: 52
Motif name: Motif 52
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.0627423

Alignment:
WTTTATTT
-TTTMCT-

Original motif     Consensus sequence: AAATAAAW Reverse complement motif     Consensus sequence: WTTTATTT


Dataset #: 2
Motif ID: 68
Motif name: Motif 68
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 8
Number of overlap: 6
Similarity score: 0.0627423

Alignment:
WAAWAAAWAWWWAA
-AGRAAA-------

Original motif     Consensus sequence: WAAWAAAWAWWWAA Reverse complement motif     Consensus sequence: TTWWWTWTTTWTTW


Dataset #: 1
Motif ID: 32
Motif name: Motif 32
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0.0627423

Alignment:
TTTATTY
TTTMCT-

Original motif     Consensus sequence: KAATAAA Reverse complement motif     Consensus sequence: TTTATTY


Dataset #: 3
Motif ID: 119
Motif name: Stat3
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.069443

Alignment:
TTCCAGGAAG
----AGRAAA

Original motif     Consensus sequence: TTCCAGGAAG Reverse complement motif     Consensus sequence: CTTCCTGGAA


Dataset #: 1 Motif ID: 8 Motif name: Motif 8

Original motif     Consensus sequence: AAATAH Reverse complement motif     Consensus sequence: DTATTT

Best Matches for Motif ID 8 (Highest to Lowest)

Dataset #: 4
Motif ID: 150
Motif name: waATwAAAATAww
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.00224204

Alignment:
DHATWAAAATAHD
------AAATAH-

Original motif     Consensus sequence: DHATWAAAATAHD Reverse complement motif     Consensus sequence: DHTATTTTWATHD


Dataset #: 4
Motif ID: 157
Motif name: wtATTTTTAww
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.00556446

Alignment:
WWTAAAAATAD
-----AAATAH

Original motif     Consensus sequence: DTATTTTTAWW Reverse complement motif     Consensus sequence: WWTAAAAATAD


Dataset #: 2
Motif ID: 68
Motif name: Motif 68
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 6
Similarity score: 0.0128826

Alignment:
WAAWAAAWAWWWAA
----AAATAH----

Original motif     Consensus sequence: WAAWAAAWAWWWAA Reverse complement motif     Consensus sequence: TTWWWTWTTTWTTW


Dataset #: 2
Motif ID: 52
Motif name: Motif 52
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0.0167304

Alignment:
AAATAAAW
AAATAH--

Original motif     Consensus sequence: AAATAAAW Reverse complement motif     Consensus sequence: WTTTATTT


Dataset #: 3
Motif ID: 118
Motif name: SRF
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.0210491

Alignment:
GCCCATATATGG
----AAATAH--

Original motif     Consensus sequence: GCCCATATATGG Reverse complement motif     Consensus sequence: CCATATATGGGC


Dataset #: 1 Motif ID: 9 Motif name: Motif 9

Original motif     Consensus sequence: GGTGGCWS Reverse complement motif     Consensus sequence: SWGCCACC

Best Matches for Motif ID 9 (Highest to Lowest)

Dataset #: 4
Motif ID: 144
Motif name: ctCTrsyGCCmCCTast
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.0240374

Alignment:
ASTAGGYGGCMSCAGDD
----GGTGGCWS-----

Original motif     Consensus sequence: HDCTGSYGCCMCCTAST Reverse complement motif     Consensus sequence: ASTAGGYGGCMSCAGDD


Dataset #: 4
Motif ID: 146
Motif name: myrGYGCCmCCTast
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.0280157

Alignment:
ASTAGGYGGCGCTBB
----GGTGGCWS---

Original motif     Consensus sequence: VBAGCGCCMCCTAST Reverse complement motif     Consensus sequence: ASTAGGYGGCGCTBB


Dataset #: 4
Motif ID: 164
Motif name: asyAGrkGGCRGCAga
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 8
Similarity score: 0.0360935

Alignment:
ASYAGRKGGCAGCABH
----GGTGGCWS----

Original motif     Consensus sequence: ASYAGRKGGCAGCABH Reverse complement motif     Consensus sequence: HBTGCTGCCYMCTKST


Dataset #: 4
Motif ID: 147
Motif name: asCAGrkGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0392839

Alignment:
ASCAGRGGGCRSB
----GGTGGCWS-

Original motif     Consensus sequence: ASCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCMCTGST


Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 10
Number of overlap: 8
Similarity score: 0.0429881

Alignment:
YDRCCASYAGRKGGCRSYV
---------GGTGGCWS--

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 1 Motif ID: 10 Motif name: Motif 10

Original motif     Consensus sequence: CTGGCCTC Reverse complement motif     Consensus sequence: GAGGCCAG

Best Matches for Motif ID 10 (Highest to Lowest)

Dataset #: 2
Motif ID: 49
Motif name: Motif 49
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0

Alignment:
CTGGCCTC
CTGGCCTC

Original motif     Consensus sequence: CTGGCCTC Reverse complement motif     Consensus sequence: GAGGCCAG


Dataset #: 1
Motif ID: 33
Motif name: Motif 33
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0326888

Alignment:
CTGGCTWC
CTGGCCTC

Original motif     Consensus sequence: CTGGCTWC Reverse complement motif     Consensus sequence: GWAGCCAG


Dataset #: 4
Motif ID: 143
Motif name: AgmAGAGGGCrscAGak
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 6
Number of overlap: 8
Similarity score: 0.047812

Alignment:
RTCTGSTGCCCTCTYCT
-----CTGGCCTC----

Original motif     Consensus sequence: AGMAGAGGGCASCAGAK Reverse complement motif     Consensus sequence: RTCTGSTGCCCTCTYCT


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0506629

Alignment:
VHGGCCAGMAGAGGGCRBY
GAGGCCAG-----------

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 4
Motif ID: 133
Motif name: shAGrGGGCAgy
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0509007

Alignment:
DBTGCCCKCTDS
-CTGGCCTC---

Original motif     Consensus sequence: SHAGRGGGCABH Reverse complement motif     Consensus sequence: DBTGCCCKCTDS


Dataset #: 1 Motif ID: 11 Motif name: Motif 11

Original motif     Consensus sequence: CTBCCTCY Reverse complement motif     Consensus sequence: MGAGGBAG

Best Matches for Motif ID 11 (Highest to Lowest)

Dataset #: 2
Motif ID: 63
Motif name: Motif 63
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0297241

Alignment:
CWCCCTCT
CTBCCTCY

Original motif     Consensus sequence: AGAGGGWG Reverse complement motif     Consensus sequence: CWCCCTCT


Dataset #: 1
Motif ID: 17
Motif name: Motif 17
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0448422

Alignment:
CCDCCTCC
CTBCCTCY

Original motif     Consensus sequence: CCDCCTCC Reverse complement motif     Consensus sequence: GGAGGDGG


Dataset #: 4
Motif ID: 169
Motif name: yvTGCyGCCmCCwGgtG
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.0620322

Alignment:
BVTGCTGCCACCWGGDG
----CTBCCTCY-----

Original motif     Consensus sequence: BVTGCTGCCACCWGGDG Reverse complement motif     Consensus sequence: CDCCWGGTGGCAGCAVV


Dataset #: 4
Motif ID: 164
Motif name: asyAGrkGGCRGCAga
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.0623054

Alignment:
HBTGCTGCCYMCTKST
----CTBCCTCY----

Original motif     Consensus sequence: ASYAGRKGGCAGCABH Reverse complement motif     Consensus sequence: HBTGCTGCCYMCTKST


Dataset #: 4
Motif ID: 154
Motif name: csCsCCTCCcc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.067516

Alignment:
VBCCCCTCCHB
-CTBCCTCY--

Original motif     Consensus sequence: VBCCCCTCCHB Reverse complement motif     Consensus sequence: BDGGAGGGGBV


Dataset #: 1 Motif ID: 12 Motif name: Motif 12

Original motif     Consensus sequence: GATGGCTC Reverse complement motif     Consensus sequence: GAGCCATC

Best Matches for Motif ID 12 (Highest to Lowest)

Dataset #: 1
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0446318

Alignment:
GGTGGCWS
GATGGCTC

Original motif     Consensus sequence: GGTGGCWS Reverse complement motif     Consensus sequence: SWGCCACC


Dataset #: 4
Motif ID: 149
Motif name: asmAGRGGGCrCTGsmkc
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 7
Number of overlap: 8
Similarity score: 0.053856

Alignment:
DBTSCAGMGCCCTCTRST
------GAGCCATC----

Original motif     Consensus sequence: ASMAGAGGGCRCTGSABH Reverse complement motif     Consensus sequence: DBTSCAGMGCCCTCTRST


Dataset #: 4
Motif ID: 146
Motif name: myrGYGCCmCCTast
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.0558657

Alignment:
ASTAGGYGGCGCTBB
----GATGGCTC---

Original motif     Consensus sequence: VBAGCGCCMCCTAST Reverse complement motif     Consensus sequence: ASTAGGYGGCGCTBB


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 11
Number of overlap: 8
Similarity score: 0.0592323

Alignment:
VHGGCCAGMAGAGGGCRBY
----------GATGGCTC-

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 4
Motif ID: 165
Motif name: wgGCCAshAGrGGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0607886

Alignment:
HDGCCACHAGRGGGCRBY
---------GATGGCTC-

Original motif     Consensus sequence: HDGCCACHAGRGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCKCTHGTGGCHH


Dataset #: 1 Motif ID: 13 Motif name: Motif 13

Original motif     Consensus sequence: CAGYDCC Reverse complement motif     Consensus sequence: GGDKCTG

Best Matches for Motif ID 13 (Highest to Lowest)

Dataset #: 2
Motif ID: 47
Motif name: Motif 47
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 7
Similarity score: 0

Alignment:
CAGYDCC
CAGYDCC

Original motif     Consensus sequence: CAGYDCC Reverse complement motif     Consensus sequence: GGDKCTG


Dataset #: 2
Motif ID: 53
Motif name: Motif 53
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 7
Similarity score: 0.0294104

Alignment:
GGGATCTG
-GGDKCTG

Original motif     Consensus sequence: CAGATCCC Reverse complement motif     Consensus sequence: GGGATCTG


Dataset #: 3
Motif ID: 113
Motif name: REST
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 13
Number of overlap: 7
Similarity score: 0.0500473

Alignment:
TTCAGCACCATGGACAGCKCC
--CAGYDCC------------

Original motif     Consensus sequence: TTCAGCACCATGGACAGCKCC Reverse complement motif     Consensus sequence: GGYGCTGTCCATGGTGCTGAA


Dataset #: 1
Motif ID: 22
Motif name: Motif 22
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 7
Similarity score: 0.0533516

Alignment:
GGKATCTG
-GGDKCTG

Original motif     Consensus sequence: CAGATYCC Reverse complement motif     Consensus sequence: GGKATCTG


Dataset #: 4
Motif ID: 149
Motif name: asmAGRGGGCrCTGsmkc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 8
Number of overlap: 7
Similarity score: 0.0558573

Alignment:
DBTSCAGMGCCCTCTRST
----CAGYDCC-------

Original motif     Consensus sequence: ASMAGAGGGCRCTGSABH Reverse complement motif     Consensus sequence: DBTSCAGMGCCCTCTRST


Dataset #: 1 Motif ID: 14 Motif name: Motif 14

Original motif     Consensus sequence: TSTGTR Reverse complement motif     Consensus sequence: MACASA

Best Matches for Motif ID 14 (Highest to Lowest)

Dataset #: 1
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.0165773

Alignment:
CACACACA
MACASA--

Original motif     Consensus sequence: CACACACA Reverse complement motif     Consensus sequence: TGTGTGTG


Dataset #: 2
Motif ID: 57
Motif name: Motif 57
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.0165773

Alignment:
KTGTGTGT
-TSTGTR-

Original motif     Consensus sequence: ACACACAY Reverse complement motif     Consensus sequence: KTGTGTGT


Dataset #: 4
Motif ID: 136
Motif name: dwCAGAAGwh
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.0401476

Alignment:
HDCTTCTGHD
----TSTGTR

Original motif     Consensus sequence: DHCAGAAGDH Reverse complement motif     Consensus sequence: HDCTTCTGHD


Dataset #: 3
Motif ID: 114
Motif name: RUNX1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.0445836

Alignment:
AAACCACAKVB
----MACASA-

Original motif     Consensus sequence: BBYTGTGGTTT Reverse complement motif     Consensus sequence: AAACCACAKVB


Dataset #: 1
Motif ID: 24
Motif name: Motif 24
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0.0456841

Alignment:
CACCCACA
MACASA--

Original motif     Consensus sequence: TGTGGGTG Reverse complement motif     Consensus sequence: CACCCACA


Dataset #: 1 Motif ID: 15 Motif name: Motif 15

Original motif     Consensus sequence: GCTCTTAA Reverse complement motif     Consensus sequence: TTAAGAGC

Best Matches for Motif ID 15 (Highest to Lowest)

Dataset #: 4
Motif ID: 159
Motif name: kkAAGAGCAsy
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0216416

Alignment:
DBAAGAGCAVH
TTAAGAGC---

Original motif     Consensus sequence: DBAAGAGCAVH Reverse complement motif     Consensus sequence: HVTGCTCTTBH


Dataset #: 2
Motif ID: 55
Motif name: Motif 55
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0390835

Alignment:
GCTCACAA
GCTCTTAA

Original motif     Consensus sequence: GCTCACAA Reverse complement motif     Consensus sequence: TTGTGAGC


Dataset #: 4
Motif ID: 148
Motif name: wwTwAAAAww
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0584188

Alignment:
HHTTTTWADD
GCTCTTAA--

Original motif     Consensus sequence: DDTWAAAAHH Reverse complement motif     Consensus sequence: HHTTTTWADD


Dataset #: 3
Motif ID: 120
Motif name: T
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0666592

Alignment:
CTAGGTGTGAA
---GCTCTTAA

Original motif     Consensus sequence: CTAGGTGTGAA Reverse complement motif     Consensus sequence: TTCACACCTAG


Dataset #: 3
Motif ID: 118
Motif name: SRF
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.0676161

Alignment:
CCATATATGGGC
----TTAAGAGC

Original motif     Consensus sequence: GCCCATATATGG Reverse complement motif     Consensus sequence: CCATATATGGGC


Dataset #: 1 Motif ID: 16 Motif name: Motif 16

Original motif     Consensus sequence: GGAAGRR Reverse complement motif     Consensus sequence: MMCTTCC

Best Matches for Motif ID 16 (Highest to Lowest)

Dataset #: 3
Motif ID: 84
Motif name: GABPA
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 7
Similarity score: 0.0238137

Alignment:
VVCACTTCCGG
--MMCTTCC--

Original motif     Consensus sequence: CCGGAAGTGVV Reverse complement motif     Consensus sequence: VVCACTTCCGG


Dataset #: 1
Motif ID: 17
Motif name: Motif 17
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 7
Similarity score: 0.0632856

Alignment:
GGAGGDGG
GGAAGRR-

Original motif     Consensus sequence: CCDCCTCC Reverse complement motif     Consensus sequence: GGAGGDGG


Dataset #: 4
Motif ID: 136
Motif name: dwCAGAAGwh
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 7
Similarity score: 0.0705782

Alignment:
HDCTTCTGHD
MMCTTCC---

Original motif     Consensus sequence: DHCAGAAGDH Reverse complement motif     Consensus sequence: HDCTTCTGHD


Dataset #: 3
Motif ID: 112
Motif name: RELA
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 7
Similarity score: 0.0712379

Alignment:
GGGRATTTCC
---MMCTTCC

Original motif     Consensus sequence: GGGRATTTCC Reverse complement motif     Consensus sequence: GGAAATKCCC


Dataset #: 4
Motif ID: 154
Motif name: csCsCCTCCcc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 7
Similarity score: 0.0768131

Alignment:
BDGGAGGGGBV
--GGAAGRR--

Original motif     Consensus sequence: VBCCCCTCCHB Reverse complement motif     Consensus sequence: BDGGAGGGGBV


Dataset #: 1 Motif ID: 17 Motif name: Motif 17

Original motif     Consensus sequence: CCDCCTCC Reverse complement motif     Consensus sequence: GGAGGDGG

Best Matches for Motif ID 17 (Highest to Lowest)

Dataset #: 4
Motif ID: 154
Motif name: csCsCCTCCcc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0325807

Alignment:
VBCCCCTCCHB
-CCDCCTCC--

Original motif     Consensus sequence: VBCCCCTCCHB Reverse complement motif     Consensus sequence: BDGGAGGGGBV


Dataset #: 1
Motif ID: 11
Motif name: Motif 11
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0441606

Alignment:
CTBCCTCY
CCDCCTCC

Original motif     Consensus sequence: CTBCCTCY Reverse complement motif     Consensus sequence: MGAGGBAG


Dataset #: 4
Motif ID: 155
Motif name: csCSCCdCCCcs
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0485525

Alignment:
VDGGGDGGGGBV
---GGAGGDGG-

Original motif     Consensus sequence: VBCCCCDCCCHV Reverse complement motif     Consensus sequence: VDGGGDGGGGBV


Dataset #: 1
Motif ID: 27
Motif name: Motif 27
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0499486

Alignment:
CSGCCGCC
CCDCCTCC

Original motif     Consensus sequence: CSGCCGCC Reverse complement motif     Consensus sequence: GGCGGCSG


Dataset #: 3
Motif ID: 116
Motif name: SP1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0500496

Alignment:
CCCCKCCCCC
--CCDCCTCC

Original motif     Consensus sequence: CCCCKCCCCC Reverse complement motif     Consensus sequence: GGGGGYGGGG


Dataset #: 1 Motif ID: 18 Motif name: Motif 18

Original motif     Consensus sequence: CATGYATG Reverse complement motif     Consensus sequence: CATKCATG

Best Matches for Motif ID 18 (Highest to Lowest)

Dataset #: 4
Motif ID: 152
Motif name: yrCATGCAyr
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.058327

Alignment:
HVTGCATGKV
CATGYATG--

Original motif     Consensus sequence: BRCATGCABD Reverse complement motif     Consensus sequence: HVTGCATGKV


Dataset #: 1
Motif ID: 31
Motif name: Motif 31
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0666244

Alignment:
CATGYACA
CATGYATG

Original motif     Consensus sequence: CATGYACA Reverse complement motif     Consensus sequence: TGTKCATG


Dataset #: 3
Motif ID: 125
Motif name: TP53
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 8
Number of overlap: 8
Similarity score: 0.068413

Alignment:
MSGGACATGYCCGGGCATGT
-----CATGYATG-------

Original motif     Consensus sequence: MSGGACATGYCCGGGCATGT Reverse complement motif     Consensus sequence: ACATGCCCGGKCATGTCCSR


Dataset #: 3
Motif ID: 118
Motif name: SRF
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0745698

Alignment:
CCATATATGGGC
-CATGYATG---

Original motif     Consensus sequence: GCCCATATATGG Reverse complement motif     Consensus sequence: CCATATATGGGC


Dataset #: 3
Motif ID: 131
Motif name: znf143
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.105729

Alignment:
BAHYTCCCAKMATGCMWYGC
----------CATKCATG--

Original motif     Consensus sequence: BAHYTCCCAKMATGCMWYGC Reverse complement motif     Consensus sequence: GCMWRGCATYRTGGGAMHTB


Dataset #: 1 Motif ID: 19 Motif name: Motif 19

Original motif     Consensus sequence: CAGSCAG Reverse complement motif     Consensus sequence: CTGSCTG

Best Matches for Motif ID 19 (Highest to Lowest)

Dataset #: 1
Motif ID: 33
Motif name: Motif 33
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 7
Similarity score: 0.0196488

Alignment:
CTGGCTWC
CTGSCTG-

Original motif     Consensus sequence: CTGGCTWC Reverse complement motif     Consensus sequence: GWAGCCAG


Dataset #: 1
Motif ID: 28
Motif name: Motif 28
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 7
Similarity score: 0.0338273

Alignment:
CTTCCTG
CTGSCTG

Original motif     Consensus sequence: CTTCCTG Reverse complement motif     Consensus sequence: CAGGAAG


Dataset #: 1
Motif ID: 11
Motif name: Motif 11
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 7
Similarity score: 0.0430055

Alignment:
MGAGGBAG
CAGSCAG-

Original motif     Consensus sequence: CTBCCTCY Reverse complement motif     Consensus sequence: MGAGGBAG


Dataset #: 1
Motif ID: 10
Motif name: Motif 10
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 7
Similarity score: 0.0473229

Alignment:
GAGGCCAG
CAGSCAG-

Original motif     Consensus sequence: CTGGCCTC Reverse complement motif     Consensus sequence: GAGGCCAG


Dataset #: 1
Motif ID: 25
Motif name: Motif 25
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 7
Similarity score: 0.0479304

Alignment:
CTGRGTTC
CTGSCTG-

Original motif     Consensus sequence: CTGRGTTC Reverse complement motif     Consensus sequence: GAACKCAG


Dataset #: 1 Motif ID: 20 Motif name: Motif 20

Original motif     Consensus sequence: CACGTR Reverse complement motif     Consensus sequence: MACGTG

Best Matches for Motif ID 20 (Highest to Lowest)

Dataset #: 3
Motif ID: 71
Motif name: Arnt
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0

Alignment:
CACGTG
CACGTR

Original motif     Consensus sequence: CACGTG Reverse complement motif     Consensus sequence: CACGTG


Dataset #: 3
Motif ID: 95
Motif name: MYCMAX
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.0102183

Alignment:
RASCACGTGGT
---MACGTG--

Original motif     Consensus sequence: RASCACGTGGT Reverse complement motif     Consensus sequence: ACCACGTGSTM


Dataset #: 3
Motif ID: 91
Motif name: MAX
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.011152

Alignment:
DAHCACGTGD
---MACGTG-

Original motif     Consensus sequence: DAHCACGTGD Reverse complement motif     Consensus sequence: BCACGTGDTD


Dataset #: 3
Motif ID: 126
Motif name: USF1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.0131944

Alignment:
CACGTGR
MACGTG-

Original motif     Consensus sequence: CACGTGR Reverse complement motif     Consensus sequence: MCACGTG


Dataset #: 3
Motif ID: 94
Motif name: Myc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.0253396

Alignment:
DCCACGTGCV
--CACGTR--

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV


Dataset #: 1 Motif ID: 21 Motif name: Motif 21

Original motif     Consensus sequence: CCACYAGG Reverse complement motif     Consensus sequence: CCTKGTGG

Best Matches for Motif ID 21 (Highest to Lowest)

Dataset #: 2
Motif ID: 48
Motif name: Motif 48
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.00903109

Alignment:
CCACYAGR
CCACYAGG

Original motif     Consensus sequence: CCACYAGR Reverse complement motif     Consensus sequence: MCTKGTGG


Dataset #: 4
Motif ID: 145
Motif name: grCCACyAGAkG
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.028408

Alignment:
CYTCTKGTGGHH
--CCTKGTGG--

Original motif     Consensus sequence: DDCCACYAGAKG Reverse complement motif     Consensus sequence: CYTCTKGTGGHH


Dataset #: 4
Motif ID: 158
Motif name: grCCACwAGrk
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0314791

Alignment:
DDCCACWAGRK
--CCACYAGG-

Original motif     Consensus sequence: DDCCACWAGRK Reverse complement motif     Consensus sequence: YMCTWGTGGHH


Dataset #: 4
Motif ID: 138
Motif name: grCCACyAGAkG
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0373754

Alignment:
DDCCACYAGAKG
--CCACYAGG--

Original motif     Consensus sequence: DDCCACYAGAKG Reverse complement motif     Consensus sequence: CYTCTMGTGGHH


Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 9
Number of overlap: 8
Similarity score: 0.0387762

Alignment:
BMSMGCCYMCTKSTGGMHM
--------CCTKGTGG---

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 1 Motif ID: 22 Motif name: Motif 22

Original motif     Consensus sequence: CAGATYCC Reverse complement motif     Consensus sequence: GGKATCTG

Best Matches for Motif ID 22 (Highest to Lowest)

Dataset #: 2
Motif ID: 53
Motif name: Motif 53
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0

Alignment:
GGGATCTG
GGKATCTG

Original motif     Consensus sequence: CAGATCCC Reverse complement motif     Consensus sequence: GGGATCTG


Dataset #: 2
Motif ID: 69
Motif name: Motif 69
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.060058

Alignment:
ACTCCAGMTCCAGG
----CAGATYCC--

Original motif     Consensus sequence: CCTGGARCTGGAGT Reverse complement motif     Consensus sequence: ACTCCAGMTCCAGG


Dataset #: 4
Motif ID: 149
Motif name: asmAGRGGGCrCTGsmkc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 7
Number of overlap: 8
Similarity score: 0.0603056

Alignment:
DBTSCAGMGCCCTCTRST
----CAGATYCC------

Original motif     Consensus sequence: ASMAGAGGGCRCTGSABH Reverse complement motif     Consensus sequence: DBTSCAGMGCCCTCTRST


Dataset #: 2
Motif ID: 64
Motif name: Motif 64
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0721296

Alignment:
CATATRCA
CAGATYCC

Original motif     Consensus sequence: CATATRCA Reverse complement motif     Consensus sequence: TGMATATG


Dataset #: 4
Motif ID: 160
Motif name: brCAGGGCCrs
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0730966

Alignment:
BBGGCCCTGBB
-GGKATCTG--

Original motif     Consensus sequence: BVCAGGGCCVB Reverse complement motif     Consensus sequence: BBGGCCCTGBB


Dataset #: 1 Motif ID: 23 Motif name: Motif 23

Original motif     Consensus sequence: GASAGAGA Reverse complement motif     Consensus sequence: TCTCTSTC

Best Matches for Motif ID 23 (Highest to Lowest)

Dataset #: 3
Motif ID: 113
Motif name: REST
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 13
Number of overlap: 8
Similarity score: 0.0614501

Alignment:
TTCAGCACCATGGACAGCKCC
------------GASAGAGA-

Original motif     Consensus sequence: TTCAGCACCATGGACAGCKCC Reverse complement motif     Consensus sequence: GGYGCTGTCCATGGTGCTGAA


Dataset #: 1
Motif ID: 2
Motif name: Motif 2
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0761109

Alignment:
AAAAHAAA
GASAGAGA

Original motif     Consensus sequence: AAAAHAAA Reverse complement motif     Consensus sequence: TTTDTTTT


Dataset #: 1
Motif ID: 38
Motif name: Motif 38
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.081673

Alignment:
GAGTTACA
GASAGAGA

Original motif     Consensus sequence: GAGTTACA Reverse complement motif     Consensus sequence: TGTAACTC


Dataset #: 2
Motif ID: 51
Motif name: Motif 51
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.081673

Alignment:
GAGTTACA
GASAGAGA

Original motif     Consensus sequence: GAGTTACA Reverse complement motif     Consensus sequence: TGTAACTC


Dataset #: 1
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0826138

Alignment:
CACACACA
GASAGAGA

Original motif     Consensus sequence: CACACACA Reverse complement motif     Consensus sequence: TGTGTGTG


Dataset #: 1 Motif ID: 24 Motif name: Motif 24

Original motif     Consensus sequence: TGTGGGTG Reverse complement motif     Consensus sequence: CACCCACA

Best Matches for Motif ID 24 (Highest to Lowest)

Dataset #: 1
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0589779

Alignment:
CACACACA
CACCCACA

Original motif     Consensus sequence: CACACACA Reverse complement motif     Consensus sequence: TGTGTGTG


Dataset #: 4
Motif ID: 162
Motif name: ccAsCCCCAcc
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.060611

Alignment:
HVASCCCCABH
-CACCCACA--

Original motif     Consensus sequence: HVASCCCCABH Reverse complement motif     Consensus sequence: DBTGGGGSTVD


Dataset #: 3
Motif ID: 114
Motif name: RUNX1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0649239

Alignment:
AAACCACAKVB
CACCCACA---

Original motif     Consensus sequence: BBYTGTGGTTT Reverse complement motif     Consensus sequence: AAACCACAKVB


Dataset #: 1
Motif ID: 31
Motif name: Motif 31
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0828996

Alignment:
TGTKCATG
TGTGGGTG

Original motif     Consensus sequence: CATGYACA Reverse complement motif     Consensus sequence: TGTKCATG


Dataset #: 1
Motif ID: 34
Motif name: Motif 34
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0843302

Alignment:
TGTGGYCA
TGTGGGTG

Original motif     Consensus sequence: TGKCCACA Reverse complement motif     Consensus sequence: TGTGGYCA


Dataset #: 1 Motif ID: 25 Motif name: Motif 25

Original motif     Consensus sequence: CTGRGTTC Reverse complement motif     Consensus sequence: GAACKCAG

Best Matches for Motif ID 25 (Highest to Lowest)

Dataset #: 1
Motif ID: 33
Motif name: Motif 33
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0224867

Alignment:
CTGGCTWC
CTGRGTTC

Original motif     Consensus sequence: CTGGCTWC Reverse complement motif     Consensus sequence: GWAGCCAG


Dataset #: 1
Motif ID: 10
Motif name: Motif 10
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.034485

Alignment:
CTGGCCTC
CTGRGTTC

Original motif     Consensus sequence: CTGGCCTC Reverse complement motif     Consensus sequence: GAGGCCAG


Dataset #: 2
Motif ID: 49
Motif name: Motif 49
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.052298

Alignment:
CTGGCCTC
CTGRGTTC

Original motif     Consensus sequence: CTGGCCTC Reverse complement motif     Consensus sequence: GAGGCCAG


Dataset #: 3
Motif ID: 107
Motif name: NR2F1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 6
Number of overlap: 8
Similarity score: 0.0551569

Alignment:
TGAMCTTTGMMCYT
-GAACKCAG-----

Original motif     Consensus sequence: TGAMCTTTGMMCYT Reverse complement motif     Consensus sequence: AKGYYCAAAGRTCA


Dataset #: 1
Motif ID: 37
Motif name: Motif 37
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0560348

Alignment:
CTGAGCYA
CTGRGTTC

Original motif     Consensus sequence: CTGAGCYA Reverse complement motif     Consensus sequence: TKGCTCAG


Dataset #: 1 Motif ID: 26 Motif name: Motif 26

Original motif     Consensus sequence: CAGAGGAY Reverse complement motif     Consensus sequence: KTCCTCTG

Best Matches for Motif ID 26 (Highest to Lowest)

Dataset #: 4
Motif ID: 136
Motif name: dwCAGAAGwh
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0359628

Alignment:
DHCAGAAGDH
--CAGAGGAY

Original motif     Consensus sequence: DHCAGAAGDH Reverse complement motif     Consensus sequence: HDCTTCTGHD


Dataset #: 4
Motif ID: 166
Motif name: CasCAGrGGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.036576

Alignment:
CACCAGRGGGCRSB
---CAGAGGAY---

Original motif     Consensus sequence: CACCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCKCTGGTG


Dataset #: 4
Motif ID: 143
Motif name: AgmAGAGGGCrscAGak
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 8
Number of overlap: 8
Similarity score: 0.0438271

Alignment:
AGMAGAGGGCASCAGAK
--CAGAGGAY-------

Original motif     Consensus sequence: AGMAGAGGGCASCAGAK Reverse complement motif     Consensus sequence: RTCTGSTGCCCTCTYCT


Dataset #: 4
Motif ID: 168
Motif name: yrcrGYGCCMyCTGGtG
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 7
Number of overlap: 8
Similarity score: 0.0450811

Alignment:
CACCAGMGGGCGCTGBD
---CAGAGGAY------

Original motif     Consensus sequence: HVCAGCGCCCYCTGGTG Reverse complement motif     Consensus sequence: CACCAGMGGGCGCTGBD


Dataset #: 4
Motif ID: 149
Motif name: asmAGRGGGCrCTGsmkc
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 9
Number of overlap: 8
Similarity score: 0.0460269

Alignment:
DBTSCAGMGCCCTCTRST
--------KTCCTCTG--

Original motif     Consensus sequence: ASMAGAGGGCRCTGSABH Reverse complement motif     Consensus sequence: DBTSCAGMGCCCTCTRST


Dataset #: 1 Motif ID: 27 Motif name: Motif 27

Original motif     Consensus sequence: CSGCCGCC Reverse complement motif     Consensus sequence: GGCGGCSG

Best Matches for Motif ID 27 (Highest to Lowest)

Dataset #: 4
Motif ID: 144
Motif name: ctCTrsyGCCmCCTast
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.0594103

Alignment:
ASTAGGYGGCMSCAGDD
----GGCGGCSG-----

Original motif     Consensus sequence: HDCTGSYGCCMCCTAST Reverse complement motif     Consensus sequence: ASTAGGYGGCMSCAGDD


Dataset #: 4
Motif ID: 169
Motif name: yvTGCyGCCmCCwGgtG
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 5
Number of overlap: 8
Similarity score: 0.0661709

Alignment:
CDCCWGGTGGCAGCAVV
-----GGCGGCSG----

Original motif     Consensus sequence: BVTGCTGCCACCWGGDG Reverse complement motif     Consensus sequence: CDCCWGGTGGCAGCAVV


Dataset #: 1
Motif ID: 17
Motif name: Motif 17
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0678225

Alignment:
CCDCCTCC
CSGCCGCC

Original motif     Consensus sequence: CCDCCTCC Reverse complement motif     Consensus sequence: GGAGGDGG


Dataset #: 4
Motif ID: 146
Motif name: myrGYGCCmCCTast
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0682918

Alignment:
ASTAGGYGGCGCTBB
----GGCGGCSG---

Original motif     Consensus sequence: VBAGCGCCMCCTAST Reverse complement motif     Consensus sequence: ASTAGGYGGCGCTBB


Dataset #: 4
Motif ID: 135
Motif name: ssCGGCCGss
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0688339

Alignment:
BSCGGCCGSV
GGCGGCSG--

Original motif     Consensus sequence: BSCGGCCGSV Reverse complement motif     Consensus sequence: VSCGGCCGSB


Dataset #: 1 Motif ID: 28 Motif name: Motif 28

Original motif     Consensus sequence: CTTCCTG Reverse complement motif     Consensus sequence: CAGGAAG

Best Matches for Motif ID 28 (Highest to Lowest)

Dataset #: 3
Motif ID: 119
Motif name: Stat3
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 7
Similarity score: 0.0301014

Alignment:
CTTCCTGGAA
CTTCCTG---

Original motif     Consensus sequence: TTCCAGGAAG Reverse complement motif     Consensus sequence: CTTCCTGGAA


Dataset #: 3
Motif ID: 84
Motif name: GABPA
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 7
Similarity score: 0.0389741

Alignment:
CCGGAAGTGVV
CAGGAAG----

Original motif     Consensus sequence: CCGGAAGTGVV Reverse complement motif     Consensus sequence: VVCACTTCCGG


Dataset #: 3
Motif ID: 80
Motif name: ELK4
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 7
Similarity score: 0.044949

Alignment:
ACCGGAAGT
-CAGGAAG-

Original motif     Consensus sequence: ACCGGAAGT Reverse complement motif     Consensus sequence: ACTTCCGGT


Dataset #: 3
Motif ID: 79
Motif name: ELK1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 7
Similarity score: 0.0709694

Alignment:
VDDCCGGAAR
---CAGGAAG

Original motif     Consensus sequence: VDDCCGGAAR Reverse complement motif     Consensus sequence: MTTCCGGHBV


Dataset #: 1
Motif ID: 19
Motif name: Motif 19
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 7
Similarity score: 0.0713134

Alignment:
CAGSCAG
CAGGAAG

Original motif     Consensus sequence: CAGSCAG Reverse complement motif     Consensus sequence: CTGSCTG


Dataset #: 1 Motif ID: 29 Motif name: Motif 29

Original motif     Consensus sequence: CATTTCY Reverse complement motif     Consensus sequence: MGAAATG

Best Matches for Motif ID 29 (Highest to Lowest)

Dataset #: 4
Motif ID: 139
Motif name: mkCTyTTCsg
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 7
Similarity score: 0.0479916

Alignment:
HBGAAAAGBD
-MGAAATG--

Original motif     Consensus sequence: HBCTTTTCBD Reverse complement motif     Consensus sequence: HBGAAAAGBD


Dataset #: 2
Motif ID: 66
Motif name: Motif 66
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 7
Similarity score: 0.050303

Alignment:
TATAAATR
-MGAAATG

Original motif     Consensus sequence: TATAAATR Reverse complement motif     Consensus sequence: KATTTATA


Dataset #: 3
Motif ID: 125
Motif name: TP53
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 12
Number of overlap: 7
Similarity score: 0.058821

Alignment:
ACATGCCCGGKCATGTCCSR
-----------CATTTCY--

Original motif     Consensus sequence: MSGGACATGYCCGGGCATGT Reverse complement motif     Consensus sequence: ACATGCCCGGKCATGTCCSR


Dataset #: 3
Motif ID: 112
Motif name: RELA
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 7
Similarity score: 0.0629654

Alignment:
GGAAATKCCC
MGAAATG---

Original motif     Consensus sequence: GGGRATTTCC Reverse complement motif     Consensus sequence: GGAAATKCCC


Dataset #: 3
Motif ID: 84
Motif name: GABPA
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 7
Similarity score: 0.0668119

Alignment:
VVCACTTCCGG
--CATTTCY--

Original motif     Consensus sequence: CCGGAAGTGVV Reverse complement motif     Consensus sequence: VVCACTTCCGG


Dataset #: 1 Motif ID: 30 Motif name: Motif 30

Original motif     Consensus sequence: CWGCAGC Reverse complement motif     Consensus sequence: GCTGCWG

Best Matches for Motif ID 30 (Highest to Lowest)

Dataset #: 3
Motif ID: 97
Motif name: Myf
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 7
Similarity score: 0.0232337

Alignment:
CWSCWGMTGCKR
CWGCAGC-----

Original motif     Consensus sequence: MRGCARCWGSWG Reverse complement motif     Consensus sequence: CWSCWGMTGCKR


Dataset #: 1
Motif ID: 41
Motif name: Motif 41
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 7
Similarity score: 0.027698

Alignment:
YCAGCAGG
-CWGCAGC

Original motif     Consensus sequence: CCTGCTGK Reverse complement motif     Consensus sequence: YCAGCAGG


Dataset #: 3
Motif ID: 105
Motif name: NHLH1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 6
Number of overlap: 7
Similarity score: 0.032311

Alignment:
VCGCAGCTGCGV
CWGCAGC-----

Original motif     Consensus sequence: VCGCAGCTGCGB Reverse complement motif     Consensus sequence: VCGCAGCTGCGV


Dataset #: 1
Motif ID: 27
Motif name: Motif 27
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 7
Similarity score: 0.037602

Alignment:
CSGCCGCC
CWGCAGC-

Original motif     Consensus sequence: CSGCCGCC Reverse complement motif     Consensus sequence: GGCGGCSG


Dataset #: 4
Motif ID: 151
Motif name: agrCCAGmAGrg
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 5
Number of overlap: 7
Similarity score: 0.0377961

Alignment:
CKCTRCTGGCVH
-GCTGCWG----

Original motif     Consensus sequence: HVGCCAGMAGRG Reverse complement motif     Consensus sequence: CKCTRCTGGCVH


Dataset #: 1 Motif ID: 31 Motif name: Motif 31

Original motif     Consensus sequence: CATGYACA Reverse complement motif     Consensus sequence: TGTKCATG

Best Matches for Motif ID 31 (Highest to Lowest)

Dataset #: 3
Motif ID: 125
Motif name: TP53
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 8
Number of overlap: 8
Similarity score: 0.0607115

Alignment:
ACATGCCCGGKCATGTCCSR
-------TGTKCATG-----

Original motif     Consensus sequence: MSGGACATGYCCGGGCATGT Reverse complement motif     Consensus sequence: ACATGCCCGGKCATGTCCSR


Dataset #: 4
Motif ID: 152
Motif name: yrCATGCAyr
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0609044

Alignment:
BRCATGCABD
--CATGYACA

Original motif     Consensus sequence: BRCATGCABD Reverse complement motif     Consensus sequence: HVTGCATGKV


Dataset #: 1
Motif ID: 18
Motif name: Motif 18
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0666244

Alignment:
CATGYATG
CATGYACA

Original motif     Consensus sequence: CATGYATG Reverse complement motif     Consensus sequence: CATKCATG


Dataset #: 2
Motif ID: 64
Motif name: Motif 64
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0706964

Alignment:
CATATRCA
CATGYACA

Original motif     Consensus sequence: CATATRCA Reverse complement motif     Consensus sequence: TGMATATG


Dataset #: 3
Motif ID: 113
Motif name: REST
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 6
Number of overlap: 8
Similarity score: 0.0726387

Alignment:
TTCAGCACCATGGACAGCKCC
--------CATGYACA-----

Original motif     Consensus sequence: TTCAGCACCATGGACAGCKCC Reverse complement motif     Consensus sequence: GGYGCTGTCCATGGTGCTGAA


Dataset #: 1 Motif ID: 32 Motif name: Motif 32

Original motif     Consensus sequence: KAATAAA Reverse complement motif     Consensus sequence: TTTATTY

Best Matches for Motif ID 32 (Highest to Lowest)

Dataset #: 2
Motif ID: 52
Motif name: Motif 52
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 7
Similarity score: 0.017829

Alignment:
WTTTATTT
-TTTATTY

Original motif     Consensus sequence: AAATAAAW Reverse complement motif     Consensus sequence: WTTTATTT


Dataset #: 1
Motif ID: 2
Motif name: Motif 2
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 7
Similarity score: 0.0445453

Alignment:
TTTDTTTT
TTTATTY-

Original motif     Consensus sequence: AAAAHAAA Reverse complement motif     Consensus sequence: TTTDTTTT


Dataset #: 2
Motif ID: 68
Motif name: Motif 68
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 7
Similarity score: 0.0470498

Alignment:
TTWWWTWTTTWTTW
-------TTTATTY

Original motif     Consensus sequence: WAAWAAAWAWWWAA Reverse complement motif     Consensus sequence: TTWWWTWTTTWTTW


Dataset #: 4
Motif ID: 150
Motif name: waATwAAAATAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 7
Similarity score: 0.0674341

Alignment:
DHTATTTTWATHD
------TTTATTY

Original motif     Consensus sequence: DHATWAAAATAHD Reverse complement motif     Consensus sequence: DHTATTTTWATHD


Dataset #: 4
Motif ID: 148
Motif name: wwTwAAAAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 7
Similarity score: 0.0811175

Alignment:
HHTTTTWADD
---TTTATTY

Original motif     Consensus sequence: DDTWAAAAHH Reverse complement motif     Consensus sequence: HHTTTTWADD


Dataset #: 1 Motif ID: 33 Motif name: Motif 33

Original motif     Consensus sequence: CTGGCTWC Reverse complement motif     Consensus sequence: GWAGCCAG

Best Matches for Motif ID 33 (Highest to Lowest)

Dataset #: 2
Motif ID: 49
Motif name: Motif 49
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.011666

Alignment:
CTGGCCTC
CTGGCTWC

Original motif     Consensus sequence: CTGGCCTC Reverse complement motif     Consensus sequence: GAGGCCAG


Dataset #: 1
Motif ID: 10
Motif name: Motif 10
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.029479

Alignment:
CTGGCCTC
CTGGCTWC

Original motif     Consensus sequence: CTGGCCTC Reverse complement motif     Consensus sequence: GAGGCCAG


Dataset #: 1
Motif ID: 25
Motif name: Motif 25
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0400133

Alignment:
CTGRGTTC
CTGGCTWC

Original motif     Consensus sequence: CTGRGTTC Reverse complement motif     Consensus sequence: GAACKCAG


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.050611

Alignment:
KBKGCCCTCTYCTGGCCHV
-----------CTGGCTWC

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 4
Motif ID: 133
Motif name: shAGrGGGCAgy
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0636793

Alignment:
DBTGCCCKCTDS
-CTGGCTWC---

Original motif     Consensus sequence: SHAGRGGGCABH Reverse complement motif     Consensus sequence: DBTGCCCKCTDS


Dataset #: 1 Motif ID: 34 Motif name: Motif 34

Original motif     Consensus sequence: TGKCCACA Reverse complement motif     Consensus sequence: TGTGGYCA

Best Matches for Motif ID 34 (Highest to Lowest)

Dataset #: 4
Motif ID: 171
Motif name: ysGTGGCCACsr
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0504663

Alignment:
VBGTGGCCACVB
---TGKCCACA-

Original motif     Consensus sequence: BVGTGGCCACBV Reverse complement motif     Consensus sequence: VBGTGGCCACVB


Dataset #: 3
Motif ID: 114
Motif name: RUNX1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0690177

Alignment:
BBYTGTGGTTT
---TGTGGYCA

Original motif     Consensus sequence: BBYTGTGGTTT Reverse complement motif     Consensus sequence: AAACCACAKVB


Dataset #: 4
Motif ID: 165
Motif name: wgGCCAshAGrGGGCrsy
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 11
Number of overlap: 8
Similarity score: 0.083395

Alignment:
KBKGCCCKCTHGTGGCHH
----------TGTGGYCA

Original motif     Consensus sequence: HDGCCACHAGRGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCKCTHGTGGCHH


Dataset #: 1
Motif ID: 24
Motif name: Motif 24
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0843302

Alignment:
CACCCACA
TGKCCACA

Original motif     Consensus sequence: TGTGGGTG Reverse complement motif     Consensus sequence: CACCCACA


Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 12
Number of overlap: 8
Similarity score: 0.0872346

Alignment:
BMSMGCCYMCTKSTGGMHM
-----------TGTGGYCA

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 1 Motif ID: 35 Motif name: Motif 35

Original motif     Consensus sequence: ACAACCAY Reverse complement motif     Consensus sequence: KTGGTTGT

Best Matches for Motif ID 35 (Highest to Lowest)

Dataset #: 2
Motif ID: 57
Motif name: Motif 57
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0737654

Alignment:
KTGTGTGT
KTGGTTGT

Original motif     Consensus sequence: ACACACAY Reverse complement motif     Consensus sequence: KTGTGTGT


Dataset #: 3
Motif ID: 113
Motif name: REST
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0887654

Alignment:
TTCAGCACCATGGACAGCKCC
---ACAACCAY----------

Original motif     Consensus sequence: TTCAGCACCATGGACAGCKCC Reverse complement motif     Consensus sequence: GGYGCTGTCCATGGTGCTGAA


Dataset #: 3
Motif ID: 120
Motif name: T
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0890625

Alignment:
TTCACACCTAG
---ACAACCAY

Original motif     Consensus sequence: CTAGGTGTGAA Reverse complement motif     Consensus sequence: TTCACACCTAG


Dataset #: 4
Motif ID: 162
Motif name: ccAsCCCCAcc
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0921848

Alignment:
DBTGGGGSTVD
-KTGGTTGT--

Original motif     Consensus sequence: HVASCCCCABH Reverse complement motif     Consensus sequence: DBTGGGGSTVD


Dataset #: 4
Motif ID: 152
Motif name: yrCATGCAyr
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0932982

Alignment:
BRCATGCABD
-ACAACCAY-

Original motif     Consensus sequence: BRCATGCABD Reverse complement motif     Consensus sequence: HVTGCATGKV


Dataset #: 1 Motif ID: 36 Motif name: Motif 36

Original motif     Consensus sequence: TCCTGGRA Reverse complement motif     Consensus sequence: TMCCAGGA

Best Matches for Motif ID 36 (Highest to Lowest)

Dataset #: 3
Motif ID: 119
Motif name: Stat3
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0190833

Alignment:
CTTCCTGGAA
--TCCTGGRA

Original motif     Consensus sequence: TTCCAGGAAG Reverse complement motif     Consensus sequence: CTTCCTGGAA


Dataset #: 4
Motif ID: 151
Motif name: agrCCAGmAGrg
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0609014

Alignment:
CKCTRCTGGCVH
---TCCTGGRA-

Original motif     Consensus sequence: HVGCCAGMAGRG Reverse complement motif     Consensus sequence: CKCTRCTGGCVH


Dataset #: 3
Motif ID: 131
Motif name: znf143
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 9
Number of overlap: 8
Similarity score: 0.061907

Alignment:
BAHYTCCCAKMATGCMWYGC
----TMCCAGGA--------

Original motif     Consensus sequence: BAHYTCCCAKMATGCMWYGC Reverse complement motif     Consensus sequence: GCMWRGCATYRTGGGAMHTB


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0667495

Alignment:
KBKGCCCTCTYCTGGCCHV
---------TCCTGGRA--

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 3
Motif ID: 85
Motif name: Hand1Tcfe2a
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0719458

Alignment:
AWRCCAGAMB
-TMCCAGGA-

Original motif     Consensus sequence: BRTCTGGMWT Reverse complement motif     Consensus sequence: AWRCCAGAMB


Dataset #: 1 Motif ID: 37 Motif name: Motif 37

Original motif     Consensus sequence: CTGAGCYA Reverse complement motif     Consensus sequence: TKGCTCAG

Best Matches for Motif ID 37 (Highest to Lowest)

Dataset #: 3
Motif ID: 100
Motif name: NFE2L2
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0542114

Alignment:
RTGACWHAGCA
-TKGCTCAG--

Original motif     Consensus sequence: RTGACWHAGCA Reverse complement motif     Consensus sequence: TGCTDWGTCAK


Dataset #: 4
Motif ID: 160
Motif name: brCAGGGCCrs
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0573364

Alignment:
BBGGCCCTGBB
-TKGCTCAG--

Original motif     Consensus sequence: BVCAGGGCCVB Reverse complement motif     Consensus sequence: BBGGCCCTGBB


Dataset #: 4
Motif ID: 142
Motif name: ctCTTAACyw
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0660909

Alignment:
HHCTTAACHD
--CTGAGCYA

Original motif     Consensus sequence: HHCTTAACHD Reverse complement motif     Consensus sequence: DDGTTAAGHD


Dataset #: 1
Motif ID: 25
Motif name: Motif 25
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0673416

Alignment:
CTGRGTTC
CTGAGCYA

Original motif     Consensus sequence: CTGRGTTC Reverse complement motif     Consensus sequence: GAACKCAG


Dataset #: 3
Motif ID: 111
Motif name: PPARG
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 11
Number of overlap: 8
Similarity score: 0.0687591

Alignment:
STAGGTCACBGTGACCYABT
----------CTGAGCYA--

Original motif     Consensus sequence: STAGGTCACBGTGACCYABT Reverse complement motif     Consensus sequence: ABTMGGTCACBGTGACCTAS


Dataset #: 1 Motif ID: 38 Motif name: Motif 38

Original motif     Consensus sequence: GAGTTACA Reverse complement motif     Consensus sequence: TGTAACTC

Best Matches for Motif ID 38 (Highest to Lowest)

Dataset #: 2
Motif ID: 51
Motif name: Motif 51
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0

Alignment:
GAGTTACA
GAGTTACA

Original motif     Consensus sequence: GAGTTACA Reverse complement motif     Consensus sequence: TGTAACTC


Dataset #: 2
Motif ID: 66
Motif name: Motif 66
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0742432

Alignment:
KATTTATA
GAGTTACA

Original motif     Consensus sequence: TATAAATR Reverse complement motif     Consensus sequence: KATTTATA


Dataset #: 3
Motif ID: 117
Motif name: Spz1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0855279

Alignment:
AGGGTAWCAGC
-GAGTTACA--

Original motif     Consensus sequence: AGGGTAWCAGC Reverse complement motif     Consensus sequence: GCTGWTACCCT


Dataset #: 2
Motif ID: 69
Motif name: Motif 69
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 8
Similarity score: 0.0901267

Alignment:
CCTGGARCTGGAGT
--TGTAACTC----

Original motif     Consensus sequence: CCTGGARCTGGAGT Reverse complement motif     Consensus sequence: ACTCCAGMTCCAGG


Dataset #: 3
Motif ID: 75
Motif name: Ddit3Cebpa
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0913372

Alignment:
GGRATTGCAKHB
-GAGTTACA---

Original motif     Consensus sequence: VDRTGCAATMCC Reverse complement motif     Consensus sequence: GGRATTGCAKHB


Dataset #: 1 Motif ID: 39 Motif name: Motif 39

Original motif     Consensus sequence: BAGAAA Reverse complement motif     Consensus sequence: TTTCTB

Best Matches for Motif ID 39 (Highest to Lowest)

Dataset #: 1
Motif ID: 23
Motif name: Motif 23
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 6
Similarity score: 0.0215381

Alignment:
GASAGAGA
--BAGAAA

Original motif     Consensus sequence: GASAGAGA Reverse complement motif     Consensus sequence: TCTCTSTC


Dataset #: 1
Motif ID: 45
Motif name: Motif 45
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.0344566

Alignment:
GSAGAGA
-BAGAAA

Original motif     Consensus sequence: GSAGAGA Reverse complement motif     Consensus sequence: TCTCTSC


Dataset #: 4
Motif ID: 139
Motif name: mkCTyTTCsg
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 6
Similarity score: 0.0384118

Alignment:
HBCTTTTCBD
----TTTCTB

Original motif     Consensus sequence: HBCTTTTCBD Reverse complement motif     Consensus sequence: HBGAAAAGBD


Dataset #: 1
Motif ID: 2
Motif name: Motif 2
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0.0438306

Alignment:
TTTDTTTT
TTTCTB--

Original motif     Consensus sequence: AAAAHAAA Reverse complement motif     Consensus sequence: TTTDTTTT


Dataset #: 4
Motif ID: 136
Motif name: dwCAGAAGwh
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 6
Similarity score: 0.0496185

Alignment:
DHCAGAAGDH
--BAGAAA--

Original motif     Consensus sequence: DHCAGAAGDH Reverse complement motif     Consensus sequence: HDCTTCTGHD


Dataset #: 1 Motif ID: 40 Motif name: Motif 40

Original motif     Consensus sequence: ARTCCCAG Reverse complement motif     Consensus sequence: CTGGGAMT

Best Matches for Motif ID 40 (Highest to Lowest)

Dataset #: 4
Motif ID: 162
Motif name: ccAsCCCCAcc
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0511488

Alignment:
DBTGGGGSTVD
-CTGGGAMT--

Original motif     Consensus sequence: HVASCCCCABH Reverse complement motif     Consensus sequence: DBTGGGGSTVD


Dataset #: 2
Motif ID: 69
Motif name: Motif 69
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0574096

Alignment:
CCTGGARCTGGAGT
-CTGGGAMT-----

Original motif     Consensus sequence: CCTGGARCTGGAGT Reverse complement motif     Consensus sequence: ACTCCAGMTCCAGG


Dataset #: 3
Motif ID: 131
Motif name: znf143
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 11
Number of overlap: 8
Similarity score: 0.0623563

Alignment:
GCMWRGCATYRTGGGAMHTB
----------CTGGGAMT--

Original motif     Consensus sequence: BAHYTCCCAKMATGCMWYGC Reverse complement motif     Consensus sequence: GCMWRGCATYRTGGGAMHTB


Dataset #: 3
Motif ID: 125
Motif name: TP53
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 11
Number of overlap: 8
Similarity score: 0.0776137

Alignment:
MSGGACATGYCCGGGCATGT
----------CTGGGAMT--

Original motif     Consensus sequence: MSGGACATGYCCGGGCATGT Reverse complement motif     Consensus sequence: ACATGCCCGGKCATGTCCSR


Dataset #: 3
Motif ID: 114
Motif name: RUNX1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.080122

Alignment:
AAACCACAKVB
-ARTCCCAG--

Original motif     Consensus sequence: BBYTGTGGTTT Reverse complement motif     Consensus sequence: AAACCACAKVB


Dataset #: 1 Motif ID: 41 Motif name: Motif 41

Original motif     Consensus sequence: CCTGCTGK Reverse complement motif     Consensus sequence: YCAGCAGG

Best Matches for Motif ID 41 (Highest to Lowest)

Dataset #: 4
Motif ID: 151
Motif name: agrCCAGmAGrg
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.028602

Alignment:
HVGCCAGMAGRG
---YCAGCAGG-

Original motif     Consensus sequence: HVGCCAGMAGRG Reverse complement motif     Consensus sequence: CKCTRCTGGCVH


Dataset #: 4
Motif ID: 168
Motif name: yrcrGYGCCMyCTGGtG
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0340048

Alignment:
CACCAGMGGGCGCTGBD
--YCAGCAGG-------

Original motif     Consensus sequence: HVCAGCGCCCYCTGGTG Reverse complement motif     Consensus sequence: CACCAGMGGGCGCTGBD


Dataset #: 1
Motif ID: 21
Motif name: Motif 21
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0342298

Alignment:
CCTKGTGG
CCTGCTGK

Original motif     Consensus sequence: CCACYAGG Reverse complement motif     Consensus sequence: CCTKGTGG


Dataset #: 4
Motif ID: 166
Motif name: CasCAGrGGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.0366705

Alignment:
BSKGCCCKCTGGTG
----CCTGCTGK--

Original motif     Consensus sequence: CACCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCKCTGGTG


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.0407982

Alignment:
VHGGCCAGMAGAGGGCRBY
----YCAGCAGG-------

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 1 Motif ID: 42 Motif name: Motif 42

Original motif     Consensus sequence: CGCGCSG Reverse complement motif     Consensus sequence: CSGCGCG

Best Matches for Motif ID 42 (Highest to Lowest)

Dataset #: 4
Motif ID: 161
Motif name: ssCGCwGCGss
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 7
Similarity score: 0.0226692

Alignment:
VSCGCDGCGSB
----CSGCGCG

Original motif     Consensus sequence: VSCGCDGCGSB Reverse complement motif     Consensus sequence: BSCGCDGCGSV


Dataset #: 4
Motif ID: 134
Motif name: ssCGwGCGss
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 7
Similarity score: 0.0315768

Alignment:
BSCGWGCGBV
-CSGCGCG--

Original motif     Consensus sequence: BSCGWGCGBV Reverse complement motif     Consensus sequence: VBCGCWCGSB


Dataset #: 4
Motif ID: 146
Motif name: myrGYGCCmCCTast
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 7
Similarity score: 0.0331622

Alignment:
ASTAGGYGGCGCTBB
------CSGCGCG--

Original motif     Consensus sequence: VBAGCGCCMCCTAST Reverse complement motif     Consensus sequence: ASTAGGYGGCGCTBB


Dataset #: 4
Motif ID: 168
Motif name: yrcrGYGCCMyCTGGtG
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 7
Similarity score: 0.0399606

Alignment:
CACCAGMGGGCGCTGBD
--------CGCGCSG--

Original motif     Consensus sequence: HVCAGCGCCCYCTGGTG Reverse complement motif     Consensus sequence: CACCAGMGGGCGCTGBD


Dataset #: 4
Motif ID: 170
Motif name: ssGGCrsTGCrs
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 7
Similarity score: 0.0456255

Alignment:
BVGCASMGCCVV
---CSGCGCG--

Original motif     Consensus sequence: VVGGCRSTGCVB Reverse complement motif     Consensus sequence: BVGCASMGCCVV


Dataset #: 1 Motif ID: 43 Motif name: Motif 43

Original motif     Consensus sequence: ACATYTA Reverse complement motif     Consensus sequence: TAMATGT

Best Matches for Motif ID 43 (Highest to Lowest)

Dataset #: 3
Motif ID: 120
Motif name: T
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 7
Similarity score: 0.0260628

Alignment:
TTCACACCTAG
---ACATYTA-

Original motif     Consensus sequence: CTAGGTGTGAA Reverse complement motif     Consensus sequence: TTCACACCTAG


Dataset #: 2
Motif ID: 58
Motif name: Motif 58
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 7
Similarity score: 0.0342454

Alignment:
TACATGCA
TAMATGT-

Original motif     Consensus sequence: TACATGCA Reverse complement motif     Consensus sequence: TGCATGTA


Dataset #: 2
Motif ID: 64
Motif name: Motif 64
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 7
Similarity score: 0.0444069

Alignment:
TGMATATG
TAMATGT-

Original motif     Consensus sequence: CATATRCA Reverse complement motif     Consensus sequence: TGMATATG


Dataset #: 4
Motif ID: 152
Motif name: yrCATGCAyr
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 7
Similarity score: 0.0458993

Alignment:
HVTGCATGKV
--TAMATGT-

Original motif     Consensus sequence: BRCATGCABD Reverse complement motif     Consensus sequence: HVTGCATGKV


Dataset #: 3
Motif ID: 121
Motif name: TAL1TCF3
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 7
Similarity score: 0.0525238

Alignment:
HVAMCATCTGKT
---ACATYTA--

Original motif     Consensus sequence: HVAMCATCTGKT Reverse complement motif     Consensus sequence: ARCAGATGRTVD


Dataset #: 1 Motif ID: 44 Motif name: Motif 44

Original motif     Consensus sequence: GDAAACA Reverse complement motif     Consensus sequence: TGTTTDC

Best Matches for Motif ID 44 (Highest to Lowest)

Dataset #: 4
Motif ID: 141
Motif name: raCAAAACam
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 7
Similarity score: 0.0588603

Alignment:
HTGTTTTGTD
-TGTTTDC--

Original motif     Consensus sequence: DACAAAACAH Reverse complement motif     Consensus sequence: HTGTTTTGTD


Dataset #: 2
Motif ID: 68
Motif name: Motif 68
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 6
Number of overlap: 7
Similarity score: 0.0651624

Alignment:
WAAWAAAWAWWWAA
--GDAAACA-----

Original motif     Consensus sequence: WAAWAAAWAWWWAA Reverse complement motif     Consensus sequence: TTWWWTWTTTWTTW


Dataset #: 1
Motif ID: 33
Motif name: Motif 33
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 7
Similarity score: 0.0667857

Alignment:
GWAGCCAG
-GDAAACA

Original motif     Consensus sequence: CTGGCTWC Reverse complement motif     Consensus sequence: GWAGCCAG


Dataset #: 1
Motif ID: 34
Motif name: Motif 34
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 7
Similarity score: 0.066941

Alignment:
TGKCCACA
-GDAAACA

Original motif     Consensus sequence: TGKCCACA Reverse complement motif     Consensus sequence: TGTGGYCA


Dataset #: 2
Motif ID: 57
Motif name: Motif 57
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 7
Similarity score: 0.0694703

Alignment:
KTGTGTGT
-TGTTTDC

Original motif     Consensus sequence: ACACACAY Reverse complement motif     Consensus sequence: KTGTGTGT


Dataset #: 1 Motif ID: 45 Motif name: Motif 45

Original motif     Consensus sequence: GSAGAGA Reverse complement motif     Consensus sequence: TCTCTSC

Best Matches for Motif ID 45 (Highest to Lowest)

Dataset #: 4
Motif ID: 140
Motif name: vkCKCTkCGk
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 7
Similarity score: 0.0315852

Alignment:
BCGYAGAGDV
--GSAGAGA-

Original motif     Consensus sequence: VDCTCTKCGB Reverse complement motif     Consensus sequence: BCGYAGAGDV


Dataset #: 1
Motif ID: 23
Motif name: Motif 23
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 7
Similarity score: 0.0364931

Alignment:
TCTCTSTC
TCTCTSC-

Original motif     Consensus sequence: GASAGAGA Reverse complement motif     Consensus sequence: TCTCTSTC


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 6
Number of overlap: 7
Similarity score: 0.0625376

Alignment:
VHGGCCAGMAGAGGGCRBY
-------GSAGAGA-----

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 4
Motif ID: 143
Motif name: AgmAGAGGGCrscAGak
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 10
Number of overlap: 7
Similarity score: 0.0633827

Alignment:
RTCTGSTGCCCTCTYCT
---------TCTCTSC-

Original motif     Consensus sequence: AGMAGAGGGCASCAGAK Reverse complement motif     Consensus sequence: RTCTGSTGCCCTCTYCT


Dataset #: 4
Motif ID: 139
Motif name: mkCTyTTCsg
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 7
Similarity score: 0.0693299

Alignment:
HBCTTTTCBD
-TCTCTSC--

Original motif     Consensus sequence: HBCTTTTCBD Reverse complement motif     Consensus sequence: HBGAAAAGBD


Dataset #: 2 Motif ID: 46 Motif name: Motif 46

Original motif     Consensus sequence: AGRKGGCR Reverse complement motif     Consensus sequence: KGCCYKCT

Best Matches for Motif ID 46 (Highest to Lowest)

Dataset #: 1
Motif ID: 1
Motif name: Motif 1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0

Alignment:
AGRKGGCR
AGRKGGCR

Original motif     Consensus sequence: AGRKGGCR Reverse complement motif     Consensus sequence: KGCCYKCT


Dataset #: 4
Motif ID: 147
Motif name: asCAGrkGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.00651548

Alignment:
ASCAGRGGGCRSB
---AGRKGGCR--

Original motif     Consensus sequence: ASCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCMCTGST


Dataset #: 4
Motif ID: 165
Motif name: wgGCCAshAGrGGGCrsy
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 9
Number of overlap: 8
Similarity score: 0.0102443

Alignment:
KBKGCCCKCTHGTGGCHH
--KGCCYKCT--------

Original motif     Consensus sequence: HDGCCACHAGRGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCKCTHGTGGCHH


Dataset #: 4
Motif ID: 166
Motif name: CasCAGrGGGCrsy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.0104954

Alignment:
CACCAGRGGGCRSB
----AGRKGGCR--

Original motif     Consensus sequence: CACCAGRGGGCRSB Reverse complement motif     Consensus sequence: BSKGCCCKCTGGTG


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0165822

Alignment:
KBKGCCCTCTYCTGGCCHV
--KGCCYKCT---------

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 2 Motif ID: 47 Motif name: Motif 47

Original motif     Consensus sequence: CAGYDCC Reverse complement motif     Consensus sequence: GGDKCTG

Best Matches for Motif ID 47 (Highest to Lowest)

Dataset #: 1
Motif ID: 13
Motif name: Motif 13
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 7
Similarity score: 0

Alignment:
GGDKCTG
GGDKCTG

Original motif     Consensus sequence: CAGYDCC Reverse complement motif     Consensus sequence: GGDKCTG


Dataset #: 2
Motif ID: 53
Motif name: Motif 53
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 7
Similarity score: 0.0288002

Alignment:
GGGATCTG
-GGDKCTG

Original motif     Consensus sequence: CAGATCCC Reverse complement motif     Consensus sequence: GGGATCTG


Dataset #: 3
Motif ID: 113
Motif name: REST
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 13
Number of overlap: 7
Similarity score: 0.0502666

Alignment:
GGYGCTGTCCATGGTGCTGAA
------------GGDKCTG--

Original motif     Consensus sequence: TTCAGCACCATGGACAGCKCC Reverse complement motif     Consensus sequence: GGYGCTGTCCATGGTGCTGAA


Dataset #: 1
Motif ID: 22
Motif name: Motif 22
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 7
Similarity score: 0.0531399

Alignment:
GGKATCTG
-GGDKCTG

Original motif     Consensus sequence: CAGATYCC Reverse complement motif     Consensus sequence: GGKATCTG


Dataset #: 4
Motif ID: 160
Motif name: brCAGGGCCrs
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 7
Similarity score: 0.0559697

Alignment:
BVCAGGGCCVB
--CAGYDCC--

Original motif     Consensus sequence: BVCAGGGCCVB Reverse complement motif     Consensus sequence: BBGGCCCTGBB


Dataset #: 2 Motif ID: 48 Motif name: Motif 48

Original motif     Consensus sequence: CCACYAGR Reverse complement motif     Consensus sequence: MCTKGTGG

Best Matches for Motif ID 48 (Highest to Lowest)

Dataset #: 1
Motif ID: 21
Motif name: Motif 21
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.00903109

Alignment:
CCACYAGG
CCACYAGR

Original motif     Consensus sequence: CCACYAGG Reverse complement motif     Consensus sequence: CCTKGTGG


Dataset #: 4
Motif ID: 145
Motif name: grCCACyAGAkG
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0155354

Alignment:
DDCCACYAGAKG
--CCACYAGR--

Original motif     Consensus sequence: DDCCACYAGAKG Reverse complement motif     Consensus sequence: CYTCTKGTGGHH


Dataset #: 4
Motif ID: 158
Motif name: grCCACwAGrk
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0192652

Alignment:
DDCCACWAGRK
--CCACYAGR-

Original motif     Consensus sequence: DDCCACWAGRK Reverse complement motif     Consensus sequence: YMCTWGTGGHH


Dataset #: 4
Motif ID: 138
Motif name: grCCACyAGAkG
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0244381

Alignment:
DDCCACYAGAKG
--CCACYAGR--

Original motif     Consensus sequence: DDCCACYAGAKG Reverse complement motif     Consensus sequence: CYTCTMGTGGHH


Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 9
Number of overlap: 8
Similarity score: 0.0284404

Alignment:
BMSMGCCYMCTKSTGGMHM
--------MCTKGTGG---

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 2 Motif ID: 49 Motif name: Motif 49

Original motif     Consensus sequence: CTGGCCTC Reverse complement motif     Consensus sequence: GAGGCCAG

Best Matches for Motif ID 49 (Highest to Lowest)

Dataset #: 1
Motif ID: 10
Motif name: Motif 10
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0

Alignment:
CTGGCCTC
CTGGCCTC

Original motif     Consensus sequence: CTGGCCTC Reverse complement motif     Consensus sequence: GAGGCCAG


Dataset #: 1
Motif ID: 33
Motif name: Motif 33
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0148758

Alignment:
CTGGCTWC
CTGGCCTC

Original motif     Consensus sequence: CTGGCTWC Reverse complement motif     Consensus sequence: GWAGCCAG


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 12
Number of overlap: 8
Similarity score: 0.0362649

Alignment:
KBKGCCCTCTYCTGGCCHV
-----------CTGGCCTC

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 4
Motif ID: 171
Motif name: ysGTGGCCACsr
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0504205

Alignment:
VBGTGGCCACVB
--CTGGCCTC--

Original motif     Consensus sequence: BVGTGGCCACBV Reverse complement motif     Consensus sequence: VBGTGGCCACVB


Dataset #: 4
Motif ID: 133
Motif name: shAGrGGGCAgy
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0509007

Alignment:
SHAGRGGGCABH
---GAGGCCAG-

Original motif     Consensus sequence: SHAGRGGGCABH Reverse complement motif     Consensus sequence: DBTGCCCKCTDS


Dataset #: 2 Motif ID: 50 Motif name: Motif 50

Original motif     Consensus sequence: AGRAA Reverse complement motif     Consensus sequence: TTMCT

Best Matches for Motif ID 50 (Highest to Lowest)

Dataset #: 1
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 5
Similarity score: 0

Alignment:
TTTMCT
-TTMCT

Original motif     Consensus sequence: AGRAAA Reverse complement motif     Consensus sequence: TTTMCT


Dataset #: 1
Motif ID: 39
Motif name: Motif 39
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 5
Similarity score: 0.0244128

Alignment:
BAGAAA
-AGRAA

Original motif     Consensus sequence: BAGAAA Reverse complement motif     Consensus sequence: TTTCTB


Dataset #: 1
Motif ID: 28
Motif name: Motif 28
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 5
Similarity score: 0.0419638

Alignment:
CTTCCTG
-TTMCT-

Original motif     Consensus sequence: CTTCCTG Reverse complement motif     Consensus sequence: CAGGAAG


Dataset #: 1
Motif ID: 29
Motif name: Motif 29
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 5
Similarity score: 0.0427966

Alignment:
CATTTCY
TTMCT--

Original motif     Consensus sequence: CATTTCY Reverse complement motif     Consensus sequence: MGAAATG


Dataset #: 3
Motif ID: 119
Motif name: Stat3
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 5
Similarity score: 0.0502276

Alignment:
CTTCCTGGAA
-TTMCT----

Original motif     Consensus sequence: TTCCAGGAAG Reverse complement motif     Consensus sequence: CTTCCTGGAA


Dataset #: 2 Motif ID: 51 Motif name: Motif 51

Original motif     Consensus sequence: GAGTTACA Reverse complement motif     Consensus sequence: TGTAACTC

Best Matches for Motif ID 51 (Highest to Lowest)

Dataset #: 1
Motif ID: 38
Motif name: Motif 38
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0

Alignment:
GAGTTACA
GAGTTACA

Original motif     Consensus sequence: GAGTTACA Reverse complement motif     Consensus sequence: TGTAACTC


Dataset #: 2
Motif ID: 66
Motif name: Motif 66
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0742432

Alignment:
KATTTATA
GAGTTACA

Original motif     Consensus sequence: TATAAATR Reverse complement motif     Consensus sequence: KATTTATA


Dataset #: 3
Motif ID: 75
Motif name: Ddit3Cebpa
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0857192

Alignment:
GGRATTGCAKHB
-GAGTTACA---

Original motif     Consensus sequence: VDRTGCAATMCC Reverse complement motif     Consensus sequence: GGRATTGCAKHB


Dataset #: 3
Motif ID: 117
Motif name: Spz1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0885417

Alignment:
AGGGTAWCAGC
-GAGTTACA--

Original motif     Consensus sequence: AGGGTAWCAGC Reverse complement motif     Consensus sequence: GCTGWTACCCT


Dataset #: 3
Motif ID: 112
Motif name: RELA
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0911946

Alignment:
GGGRATTTCC
--GAGTTACA

Original motif     Consensus sequence: GGGRATTTCC Reverse complement motif     Consensus sequence: GGAAATKCCC


Dataset #: 2 Motif ID: 52 Motif name: Motif 52

Original motif     Consensus sequence: AAATAAAW Reverse complement motif     Consensus sequence: WTTTATTT

Best Matches for Motif ID 52 (Highest to Lowest)

Dataset #: 2
Motif ID: 68
Motif name: Motif 68
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0178205

Alignment:
TTWWWTWTTTWTTW
------WTTTATTT

Original motif     Consensus sequence: WAAWAAAWAWWWAA Reverse complement motif     Consensus sequence: TTWWWTWTTTWTTW


Dataset #: 4
Motif ID: 150
Motif name: waATwAAAATAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0502803

Alignment:
DHTATTTTWATHD
-----WTTTATTT

Original motif     Consensus sequence: DHATWAAAATAHD Reverse complement motif     Consensus sequence: DHTATTTTWATHD


Dataset #: 1
Motif ID: 2
Motif name: Motif 2
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0573886

Alignment:
AAAAHAAA
AAATAAAW

Original motif     Consensus sequence: AAAAHAAA Reverse complement motif     Consensus sequence: TTTDTTTT


Dataset #: 4
Motif ID: 148
Motif name: wwTwAAAAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0617903

Alignment:
HHTTTTWADD
--WTTTATTT

Original motif     Consensus sequence: DDTWAAAAHH Reverse complement motif     Consensus sequence: HHTTTTWADD


Dataset #: 4
Motif ID: 157
Motif name: wtATTTTTAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0718936

Alignment:
DTATTTTTAWW
--WTTTATTT-

Original motif     Consensus sequence: DTATTTTTAWW Reverse complement motif     Consensus sequence: WWTAAAAATAD


Dataset #: 2 Motif ID: 53 Motif name: Motif 53

Original motif     Consensus sequence: CAGATCCC Reverse complement motif     Consensus sequence: GGGATCTG

Best Matches for Motif ID 53 (Highest to Lowest)

Dataset #: 1
Motif ID: 22
Motif name: Motif 22
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0

Alignment:
CAGATYCC
CAGATCCC

Original motif     Consensus sequence: CAGATYCC Reverse complement motif     Consensus sequence: GGKATCTG


Dataset #: 4
Motif ID: 149
Motif name: asmAGRGGGCrCTGsmkc
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 7
Number of overlap: 8
Similarity score: 0.0479917

Alignment:
DBTSCAGMGCCCTCTRST
----CAGATCCC------

Original motif     Consensus sequence: ASMAGAGGGCRCTGSABH Reverse complement motif     Consensus sequence: DBTSCAGMGCCCTCTRST


Dataset #: 4
Motif ID: 160
Motif name: brCAGGGCCrs
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0605671

Alignment:
BBGGCCCTGBB
-GGGATCTG--

Original motif     Consensus sequence: BVCAGGGCCVB Reverse complement motif     Consensus sequence: BBGGCCCTGBB


Dataset #: 2
Motif ID: 69
Motif name: Motif 69
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.0606088

Alignment:
ACTCCAGMTCCAGG
----CAGATCCC--

Original motif     Consensus sequence: CCTGGARCTGGAGT Reverse complement motif     Consensus sequence: ACTCCAGMTCCAGG


Dataset #: 4
Motif ID: 168
Motif name: yrcrGYGCCMyCTGGtG
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.065385

Alignment:
CACCAGMGGGCGCTGBD
-------GGGATCTG--

Original motif     Consensus sequence: HVCAGCGCCCYCTGGTG Reverse complement motif     Consensus sequence: CACCAGMGGGCGCTGBD


Dataset #: 2 Motif ID: 54 Motif name: Motif 54

Original motif     Consensus sequence: ATTYY Reverse complement motif     Consensus sequence: MKAAT

Best Matches for Motif ID 54 (Highest to Lowest)

Dataset #: 4
Motif ID: 157
Motif name: wtATTTTTAww
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 5
Similarity score: 0.0491344

Alignment:
DTATTTTTAWW
--ATTYY----

Original motif     Consensus sequence: DTATTTTTAWW Reverse complement motif     Consensus sequence: WWTAAAAATAD


Dataset #: 1
Motif ID: 29
Motif name: Motif 29
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 5
Similarity score: 0.0551561

Alignment:
CATTTCY
-ATTYY-

Original motif     Consensus sequence: CATTTCY Reverse complement motif     Consensus sequence: MGAAATG


Dataset #: 4
Motif ID: 150
Motif name: waATwAAAATAww
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 6
Number of overlap: 5
Similarity score: 0.0567288

Alignment:
DHTATTTTWATHD
---ATTYY-----

Original motif     Consensus sequence: DHATWAAAATAHD Reverse complement motif     Consensus sequence: DHTATTTTWATHD


Dataset #: 4
Motif ID: 148
Motif name: wwTwAAAAww
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 5
Similarity score: 0.0727457

Alignment:
HHTTTTWADD
-ATTYY----

Original motif     Consensus sequence: DDTWAAAAHH Reverse complement motif     Consensus sequence: HHTTTTWADD


Dataset #: 3
Motif ID: 131
Motif name: znf143
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 9
Number of overlap: 5
Similarity score: 0.0737392

Alignment:
BAHYTCCCAKMATGCMWYGC
--------MKAAT-------

Original motif     Consensus sequence: BAHYTCCCAKMATGCMWYGC Reverse complement motif     Consensus sequence: GCMWRGCATYRTGGGAMHTB


Dataset #: 2 Motif ID: 55 Motif name: Motif 55

Original motif     Consensus sequence: GCTCACAA Reverse complement motif     Consensus sequence: TTGTGAGC

Best Matches for Motif ID 55 (Highest to Lowest)

Dataset #: 1
Motif ID: 15
Motif name: Motif 15
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.071643

Alignment:
GCTCTTAA
GCTCACAA

Original motif     Consensus sequence: GCTCTTAA Reverse complement motif     Consensus sequence: TTAAGAGC


Dataset #: 2
Motif ID: 57
Motif name: Motif 57
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0907452

Alignment:
KTGTGTGT
TTGTGAGC

Original motif     Consensus sequence: ACACACAY Reverse complement motif     Consensus sequence: KTGTGTGT


Dataset #: 4
Motif ID: 145
Motif name: grCCACyAGAkG
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.0949146

Alignment:
CYTCTKGTGGHH
----TTGTGAGC

Original motif     Consensus sequence: DDCCACYAGAKG Reverse complement motif     Consensus sequence: CYTCTKGTGGHH


Dataset #: 4
Motif ID: 158
Motif name: grCCACwAGrk
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0951691

Alignment:
YMCTWGTGGHH
---TTGTGAGC

Original motif     Consensus sequence: DDCCACWAGRK Reverse complement motif     Consensus sequence: YMCTWGTGGHH


Dataset #: 3
Motif ID: 76
Motif name: E2F1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.103125

Alignment:
GCGCSAAA
GCTCACAA

Original motif     Consensus sequence: TTTSGCGC Reverse complement motif     Consensus sequence: GCGCSAAA


Dataset #: 2 Motif ID: 56 Motif name: Motif 56

Original motif     Consensus sequence: CCACATGG Reverse complement motif     Consensus sequence: CCATGTGG

Best Matches for Motif ID 56 (Highest to Lowest)

Dataset #: 1
Motif ID: 21
Motif name: Motif 21
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0480363

Alignment:
CCTKGTGG
CCATGTGG

Original motif     Consensus sequence: CCACYAGG Reverse complement motif     Consensus sequence: CCTKGTGG


Dataset #: 2
Motif ID: 48
Motif name: Motif 48
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0609421

Alignment:
MCTKGTGG
CCATGTGG

Original motif     Consensus sequence: CCACYAGR Reverse complement motif     Consensus sequence: MCTKGTGG


Dataset #: 3
Motif ID: 95
Motif name: MYCMAX
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0616071

Alignment:
RASCACGTGGT
--CCACATGG-

Original motif     Consensus sequence: RASCACGTGGT Reverse complement motif     Consensus sequence: ACCACGTGSTM


Dataset #: 3
Motif ID: 96
Motif name: Mycn
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0634989

Alignment:
HSCACGTGGC
-CCACATGG-

Original motif     Consensus sequence: HSCACGTGGC Reverse complement motif     Consensus sequence: GCCACGTGSD


Dataset #: 4
Motif ID: 158
Motif name: grCCACwAGrk
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0666667

Alignment:
DDCCACWAGRK
--CCACATGG-

Original motif     Consensus sequence: DDCCACWAGRK Reverse complement motif     Consensus sequence: YMCTWGTGGHH


Dataset #: 2 Motif ID: 57 Motif name: Motif 57

Original motif     Consensus sequence: ACACACAY Reverse complement motif     Consensus sequence: KTGTGTGT

Best Matches for Motif ID 57 (Highest to Lowest)

Dataset #: 1
Motif ID: 35
Motif name: Motif 35
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0591808

Alignment:
KTGGTTGT
KTGTGTGT

Original motif     Consensus sequence: ACAACCAY Reverse complement motif     Consensus sequence: KTGGTTGT


Dataset #: 3
Motif ID: 114
Motif name: RUNX1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0712868

Alignment:
BBYTGTGGTTT
--KTGTGTGT-

Original motif     Consensus sequence: BBYTGTGGTTT Reverse complement motif     Consensus sequence: AAACCACAKVB


Dataset #: 3
Motif ID: 120
Motif name: T
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0758601

Alignment:
TTCACACCTAG
-ACACACAY--

Original motif     Consensus sequence: CTAGGTGTGAA Reverse complement motif     Consensus sequence: TTCACACCTAG


Dataset #: 2
Motif ID: 55
Motif name: Motif 55
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0761605

Alignment:
TTGTGAGC
KTGTGTGT

Original motif     Consensus sequence: GCTCACAA Reverse complement motif     Consensus sequence: TTGTGAGC


Dataset #: 4
Motif ID: 162
Motif name: ccAsCCCCAcc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0776002

Alignment:
HVASCCCCABH
--ACACACAY-

Original motif     Consensus sequence: HVASCCCCABH Reverse complement motif     Consensus sequence: DBTGGGGSTVD


Dataset #: 2 Motif ID: 58 Motif name: Motif 58

Original motif     Consensus sequence: TACATGCA Reverse complement motif     Consensus sequence: TGCATGTA

Best Matches for Motif ID 58 (Highest to Lowest)

Dataset #: 4
Motif ID: 152
Motif name: yrCATGCAyr
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0160706

Alignment:
BRCATGCABD
TACATGCA--

Original motif     Consensus sequence: BRCATGCABD Reverse complement motif     Consensus sequence: HVTGCATGKV


Dataset #: 3
Motif ID: 125
Motif name: TP53
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0595681

Alignment:
ACATGCCCGGKCATGTCCSR
---------TGCATGTA---

Original motif     Consensus sequence: MSGGACATGYCCGGGCATGT Reverse complement motif     Consensus sequence: ACATGCCCGGKCATGTCCSR


Dataset #: 2
Motif ID: 64
Motif name: Motif 64
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0642891

Alignment:
CATATRCA
TACATGCA

Original motif     Consensus sequence: CATATRCA Reverse complement motif     Consensus sequence: TGMATATG


Dataset #: 1
Motif ID: 36
Motif name: Motif 36
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0792922

Alignment:
TCCTGGRA
TGCATGTA

Original motif     Consensus sequence: TCCTGGRA Reverse complement motif     Consensus sequence: TMCCAGGA


Dataset #: 3
Motif ID: 95
Motif name: MYCMAX
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0822408

Alignment:
RASCACGTGGT
-TGCATGTA--

Original motif     Consensus sequence: RASCACGTGGT Reverse complement motif     Consensus sequence: ACCACGTGSTM


Dataset #: 2 Motif ID: 59 Motif name: Motif 59

Original motif     Consensus sequence: CCCCRCCC Reverse complement motif     Consensus sequence: GGGKGGGG

Best Matches for Motif ID 59 (Highest to Lowest)

Dataset #: 1
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.00363191

Alignment:
GGGDGGGG
GGGKGGGG

Original motif     Consensus sequence: CCCCDCCC Reverse complement motif     Consensus sequence: GGGDGGGG


Dataset #: 4
Motif ID: 155
Motif name: csCSCCdCCCcs
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0143924

Alignment:
VBCCCCDCCCHV
--CCCCRCCC--

Original motif     Consensus sequence: VBCCCCDCCCHV Reverse complement motif     Consensus sequence: VDGGGDGGGGBV


Dataset #: 3
Motif ID: 89
Motif name: Klf4
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0334874

Alignment:
GCCYCMCCCD
-CCCCRCCC-

Original motif     Consensus sequence: DGGGYGKGGC Reverse complement motif     Consensus sequence: GCCYCMCCCD


Dataset #: 3
Motif ID: 116
Motif name: SP1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0421627

Alignment:
GGGGGYGGGG
--GGGKGGGG

Original motif     Consensus sequence: CCCCKCCCCC Reverse complement motif     Consensus sequence: GGGGGYGGGG


Dataset #: 4
Motif ID: 154
Motif name: csCsCCTCCcc
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0467112

Alignment:
VBCCCCTCCHB
--CCCCRCCC-

Original motif     Consensus sequence: VBCCCCTCCHB Reverse complement motif     Consensus sequence: BDGGAGGGGBV


Dataset #: 2 Motif ID: 60 Motif name: Motif 60

Original motif     Consensus sequence: CTGGAR Reverse complement motif     Consensus sequence: MTCCAG

Best Matches for Motif ID 60 (Highest to Lowest)

Dataset #: 1
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.00500479

Alignment:
CTGGRRA
CTGGAR-

Original motif     Consensus sequence: CTGGRRA Reverse complement motif     Consensus sequence: TMMCCAG


Dataset #: 2
Motif ID: 69
Motif name: Motif 69
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 8
Number of overlap: 6
Similarity score: 0.0149252

Alignment:
CCTGGARCTGGAGT
-------CTGGAR-

Original motif     Consensus sequence: CCTGGARCTGGAGT Reverse complement motif     Consensus sequence: ACTCCAGMTCCAGG


Dataset #: 1
Motif ID: 36
Motif name: Motif 36
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.0273394

Alignment:
TCCTGGRA
--CTGGAR

Original motif     Consensus sequence: TCCTGGRA Reverse complement motif     Consensus sequence: TMCCAGGA


Dataset #: 4
Motif ID: 151
Motif name: agrCCAGmAGrg
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 6
Number of overlap: 6
Similarity score: 0.0324331

Alignment:
CKCTRCTGGCVH
-----CTGGAR-

Original motif     Consensus sequence: HVGCCAGMAGRG Reverse complement motif     Consensus sequence: CKCTRCTGGCVH


Dataset #: 3
Motif ID: 85
Motif name: Hand1Tcfe2a
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 6
Similarity score: 0.0370865

Alignment:
BRTCTGGMWT
---CTGGAR-

Original motif     Consensus sequence: BRTCTGGMWT Reverse complement motif     Consensus sequence: AWRCCAGAMB


Dataset #: 2 Motif ID: 61 Motif name: Motif 61

Original motif     Consensus sequence: AGATGGY Reverse complement motif     Consensus sequence: KCCATCT

Best Matches for Motif ID 61 (Highest to Lowest)

Dataset #: 2
Motif ID: 63
Motif name: Motif 63
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 7
Similarity score: 0.0339703

Alignment:
CWCCCTCT
-KCCATCT

Original motif     Consensus sequence: AGAGGGWG Reverse complement motif     Consensus sequence: CWCCCTCT


Dataset #: 3
Motif ID: 121
Motif name: TAL1TCF3
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 7
Similarity score: 0.034782

Alignment:
ARCAGATGRTVD
---AGATGGY--

Original motif     Consensus sequence: HVAMCATCTGKT Reverse complement motif     Consensus sequence: ARCAGATGRTVD


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 7
Similarity score: 0.0365189

Alignment:
VHGGCCAGMAGAGGGCRBY
---------AGATGGY---

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 2
Motif ID: 46
Motif name: Motif 46
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 7
Similarity score: 0.0371728

Alignment:
AGRKGGCR
AGATGGY-

Original motif     Consensus sequence: AGRKGGCR Reverse complement motif     Consensus sequence: KGCCYKCT


Dataset #: 1
Motif ID: 1
Motif name: Motif 1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 7
Similarity score: 0.0375558

Alignment:
AGRKGGCR
AGATGGY-

Original motif     Consensus sequence: AGRKGGCR Reverse complement motif     Consensus sequence: KGCCYKCT


Dataset #: 2 Motif ID: 62 Motif name: Motif 62

Original motif     Consensus sequence: CGCCVCC Reverse complement motif     Consensus sequence: GGVGGCG

Best Matches for Motif ID 62 (Highest to Lowest)

Dataset #: 4
Motif ID: 146
Motif name: myrGYGCCmCCTast
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 7
Similarity score: 0.0315476

Alignment:
VBAGCGCCMCCTAST
----CGCCVCC----

Original motif     Consensus sequence: VBAGCGCCMCCTAST Reverse complement motif     Consensus sequence: ASTAGGYGGCGCTBB


Dataset #: 1
Motif ID: 27
Motif name: Motif 27
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 7
Similarity score: 0.0348335

Alignment:
GGCGGCSG
GGVGGCG-

Original motif     Consensus sequence: CSGCCGCC Reverse complement motif     Consensus sequence: GGCGGCSG


Dataset #: 4
Motif ID: 137
Motif name: rgCGCCmyCTgs
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 7
Similarity score: 0.0357527

Alignment:
SHAGKGGGCGCB
---GGVGGCG--

Original motif     Consensus sequence: VGCGCCCYCTDS Reverse complement motif     Consensus sequence: SHAGKGGGCGCB


Dataset #: 4
Motif ID: 153
Motif name: scAGrkGGCGcy
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 7
Similarity score: 0.0403279

Alignment:
VGCGCCCMCTDS
--CGCCVCC---

Original motif     Consensus sequence: SHAGRGGGCGCB Reverse complement motif     Consensus sequence: VGCGCCCMCTDS


Dataset #: 4
Motif ID: 155
Motif name: csCSCCdCCCcs
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 7
Similarity score: 0.0439081

Alignment:
VBCCCCDCCCHV
--CGCCVCC---

Original motif     Consensus sequence: VBCCCCDCCCHV Reverse complement motif     Consensus sequence: VDGGGDGGGGBV


Dataset #: 2 Motif ID: 63 Motif name: Motif 63

Original motif     Consensus sequence: AGAGGGWG Reverse complement motif     Consensus sequence: CWCCCTCT

Best Matches for Motif ID 63 (Highest to Lowest)

Dataset #: 1
Motif ID: 11
Motif name: Motif 11
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0323316

Alignment:
MGAGGBAG
AGAGGGWG

Original motif     Consensus sequence: CTBCCTCY Reverse complement motif     Consensus sequence: MGAGGBAG


Dataset #: 4
Motif ID: 149
Motif name: asmAGRGGGCrCTGsmkc
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 8
Number of overlap: 8
Similarity score: 0.040911

Alignment:
DBTSCAGMGCCCTCTRST
-------CWCCCTCT---

Original motif     Consensus sequence: ASMAGAGGGCRCTGSABH Reverse complement motif     Consensus sequence: DBTSCAGMGCCCTCTRST


Dataset #: 4
Motif ID: 153
Motif name: scAGrkGGCGcy
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0435349

Alignment:
SHAGRGGGCGCB
--AGAGGGWG--

Original motif     Consensus sequence: SHAGRGGGCGCB Reverse complement motif     Consensus sequence: VGCGCCCMCTDS


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0462891

Alignment:
VHGGCCAGMAGAGGGCRBY
---------AGAGGGWG--

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 4
Motif ID: 137
Motif name: rgCGCCmyCTgs
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0481673

Alignment:
VGCGCCCYCTDS
--CWCCCTCT--

Original motif     Consensus sequence: VGCGCCCYCTDS Reverse complement motif     Consensus sequence: SHAGKGGGCGCB


Dataset #: 2 Motif ID: 64 Motif name: Motif 64

Original motif     Consensus sequence: CATATRCA Reverse complement motif     Consensus sequence: TGMATATG

Best Matches for Motif ID 64 (Highest to Lowest)

Dataset #: 1
Motif ID: 31
Motif name: Motif 31
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0465487

Alignment:
CATGYACA
CATATRCA

Original motif     Consensus sequence: CATGYACA Reverse complement motif     Consensus sequence: TGTKCATG


Dataset #: 1
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0585881

Alignment:
CACACACA
CATATRCA

Original motif     Consensus sequence: CACACACA Reverse complement motif     Consensus sequence: TGTGTGTG


Dataset #: 2
Motif ID: 58
Motif name: Motif 58
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0607109

Alignment:
TACATGCA
CATATRCA

Original motif     Consensus sequence: TACATGCA Reverse complement motif     Consensus sequence: TGCATGTA


Dataset #: 4
Motif ID: 152
Motif name: yrCATGCAyr
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0626249

Alignment:
BRCATGCABD
CATATRCA--

Original motif     Consensus sequence: BRCATGCABD Reverse complement motif     Consensus sequence: HVTGCATGKV


Dataset #: 2
Motif ID: 69
Motif name: Motif 69
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.0676075

Alignment:
ACTCCAGMTCCAGG
----CATATRCA--

Original motif     Consensus sequence: CCTGGARCTGGAGT Reverse complement motif     Consensus sequence: ACTCCAGMTCCAGG


Dataset #: 2 Motif ID: 65 Motif name: Motif 65

Original motif     Consensus sequence: ARAACA Reverse complement motif     Consensus sequence: TGTTMT

Best Matches for Motif ID 65 (Highest to Lowest)

Dataset #: 4
Motif ID: 141
Motif name: raCAAAACam
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0.00122368

Alignment:
DACAAAACAH
---ARAACA-

Original motif     Consensus sequence: DACAAAACAH Reverse complement motif     Consensus sequence: HTGTTTTGTD


Dataset #: 1
Motif ID: 44
Motif name: Motif 44
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.0101983

Alignment:
GDAAACA
-ARAACA

Original motif     Consensus sequence: GDAAACA Reverse complement motif     Consensus sequence: TGTTTDC


Dataset #: 4
Motif ID: 159
Motif name: kkAAGAGCAsy
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 6
Similarity score: 0.0232212

Alignment:
HVTGCTCTTBH
--TGTTMT---

Original motif     Consensus sequence: DBAAGAGCAVH Reverse complement motif     Consensus sequence: HVTGCTCTTBH


Dataset #: 3
Motif ID: 121
Motif name: TAL1TCF3
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 7
Number of overlap: 6
Similarity score: 0.0330056

Alignment:
HVAMCATCTGKT
ARAACA------

Original motif     Consensus sequence: HVAMCATCTGKT Reverse complement motif     Consensus sequence: ARCAGATGRTVD


Dataset #: 1
Motif ID: 2
Motif name: Motif 2
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.0333069

Alignment:
AAAAHAAA
ARAACA--

Original motif     Consensus sequence: AAAAHAAA Reverse complement motif     Consensus sequence: TTTDTTTT


Dataset #: 2 Motif ID: 66 Motif name: Motif 66

Original motif     Consensus sequence: TATAAATR Reverse complement motif     Consensus sequence: KATTTATA

Best Matches for Motif ID 66 (Highest to Lowest)

Dataset #: 4
Motif ID: 157
Motif name: wtATTTTTAww
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.00950221

Alignment:
WWTAAAAATAD
--TATAAATR-

Original motif     Consensus sequence: DTATTTTTAWW Reverse complement motif     Consensus sequence: WWTAAAAATAD


Dataset #: 4
Motif ID: 150
Motif name: waATwAAAATAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0358566

Alignment:
DHTATTTTWATHD
--KATTTATA---

Original motif     Consensus sequence: DHATWAAAATAHD Reverse complement motif     Consensus sequence: DHTATTTTWATHD


Dataset #: 2
Motif ID: 51
Motif name: Motif 51
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0432007

Alignment:
TGTAACTC
TATAAATR

Original motif     Consensus sequence: GAGTTACA Reverse complement motif     Consensus sequence: TGTAACTC


Dataset #: 1
Motif ID: 38
Motif name: Motif 38
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0432007

Alignment:
TGTAACTC
TATAAATR

Original motif     Consensus sequence: GAGTTACA Reverse complement motif     Consensus sequence: TGTAACTC


Dataset #: 2
Motif ID: 68
Motif name: Motif 68
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0496717

Alignment:
WAAWAAAWAWWWAA
-TATAAATR-----

Original motif     Consensus sequence: WAAWAAAWAWWWAA Reverse complement motif     Consensus sequence: TTWWWTWTTTWTTW


Dataset #: 2 Motif ID: 67 Motif name: Motif 67

Original motif     Consensus sequence: SYGCCCYCTDSTGG Reverse complement motif     Consensus sequence: CCASHAGKGGGCKS

Best Matches for Motif ID 67 (Highest to Lowest)

Dataset #: 4
Motif ID: 156
Motif name: rgyGCCMyCTksTGGccd
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 14
Similarity score: 0

Alignment:
RVYGCCCYCTKSTGGCHD
-SYGCCCYCTDSTGG---

Original motif     Consensus sequence: RVYGCCCYCTKSTGGCHD Reverse complement motif     Consensus sequence: DDGCCASYAGMGGGCKVM


Dataset #: 3
Motif ID: 74
Motif name: CTCF
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 14
Similarity score: 0.0137353

Alignment:
BMSMGCCYMCTKSTGGMHM
--SYGCCCYCTDSTGG---

Original motif     Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif     Consensus sequence: BMSMGCCYMCTKSTGGMHM


Dataset #: 4
Motif ID: 165
Motif name: wgGCCAshAGrGGGCrsy
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 14
Similarity score: 0.0259772

Alignment:
HDGCCACHAGRGGGCRBY
---CCASHAGKGGGCKS-

Original motif     Consensus sequence: HDGCCACHAGRGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCKCTHGTGGCHH


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 14
Similarity score: 0.0316372

Alignment:
VHGGCCAGMAGAGGGCRBY
----CCASHAGKGGGCKS-

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 4
Motif ID: 169
Motif name: yvTGCyGCCmCCwGgtG
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 14
Similarity score: 0.0786902

Alignment:
BVTGCTGCCACCWGGDG
-SYGCCCYCTDSTGG--

Original motif     Consensus sequence: BVTGCTGCCACCWGGDG Reverse complement motif     Consensus sequence: CDCCWGGTGGCAGCAVV


Dataset #: 2 Motif ID: 68 Motif name: Motif 68

Original motif     Consensus sequence: WAAWAAAWAWWWAA Reverse complement motif     Consensus sequence: TTWWWTWTTTWTTW

Best Matches for Motif ID 68 (Highest to Lowest)

Dataset #: 4
Motif ID: 150
Motif name: waATwAAAATAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 13
Similarity score: 0.0423083

Alignment:
-DHTATTTTWATHD
TTWWWTWTTTWTTW

Original motif     Consensus sequence: DHATWAAAATAHD Reverse complement motif     Consensus sequence: DHTATTTTWATHD


Dataset #: 4
Motif ID: 157
Motif name: wtATTTTTAww
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 1.06057

Alignment:
DTATTTTTAWW---
TTWWWTWTTTWTTW

Original motif     Consensus sequence: DTATTTTTAWW Reverse complement motif     Consensus sequence: WWTAAAAATAD


Dataset #: 4
Motif ID: 148
Motif name: wwTwAAAAww
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 1.54726

Alignment:
DDTWAAAAHH----
WAAWAAAWAWWWAA

Original motif     Consensus sequence: DDTWAAAAHH Reverse complement motif     Consensus sequence: HHTTTTWADD


Dataset #: 4
Motif ID: 141
Motif name: raCAAAACam
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 1.55678

Alignment:
----HTGTTTTGTD
TTWWWTWTTTWTTW

Original motif     Consensus sequence: DACAAAACAH Reverse complement motif     Consensus sequence: HTGTTTTGTD


Dataset #: 2
Motif ID: 52
Motif name: Motif 52
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 2.5

Alignment:
------WTTTATTT
TTWWWTWTTTWTTW

Original motif     Consensus sequence: AAATAAAW Reverse complement motif     Consensus sequence: WTTTATTT


Dataset #: 2 Motif ID: 69 Motif name: Motif 69

Original motif     Consensus sequence: CCTGGARCTGGAGT Reverse complement motif     Consensus sequence: ACTCCAGMTCCAGG

Best Matches for Motif ID 69 (Highest to Lowest)

Dataset #: 4
Motif ID: 156
Motif name: rgyGCCMyCTksTGGccd
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.070946

Alignment:
DDGCCASYAGMGGGCKVM
ACTCCAGMTCCAGG----

Original motif     Consensus sequence: RVYGCCCYCTKSTGGCHD Reverse complement motif     Consensus sequence: DDGCCASYAGMGGGCKVM


Dataset #: 4
Motif ID: 149
Motif name: asmAGRGGGCrCTGsmkc
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 5
Number of overlap: 14
Similarity score: 0.073647

Alignment:
DBTSCAGMGCCCTCTRST
ACTCCAGMTCCAGG----

Original motif     Consensus sequence: ASMAGAGGGCRCTGSABH Reverse complement motif     Consensus sequence: DBTSCAGMGCCCTCTRST


Dataset #: 4
Motif ID: 163
Motif name: gwGGCCAGmAGAGGGCrby
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 14
Similarity score: 0.0761843

Alignment:
VHGGCCAGMAGAGGGCRBY
-ACTCCAGMTCCAGG----

Original motif     Consensus sequence: VHGGCCAGMAGAGGGCRBY Reverse complement motif     Consensus sequence: KBKGCCCTCTYCTGGCCHV


Dataset #: 3
Motif ID: 115
Motif name: RXRRAR_DR5
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0775577

Alignment:
RGKTCABVVRGAGGTCA
ACTCCAGMTCCAGG---

Original motif     Consensus sequence: RGKTCABVVRGAGGTCA Reverse complement motif     Consensus sequence: TGACCTCKVVBTGAYCK


Dataset #: 2
Motif ID: 67
Motif name: Motif 67
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0806144

Alignment:
CCASHAGKGGGCKS
CCTGGARCTGGAGT

Original motif     Consensus sequence: SYGCCCYCTDSTGG Reverse complement motif     Consensus sequence: CCASHAGKGGGCKS


Dataset #: 3 Motif ID: 70 Motif name: Ar

Original motif     Consensus sequence: HWDAGHACRHHVTGTHCCHVMV Reverse complement motif     Consensus sequence: VRVDGGHACAVDDKGTHCTDWH

Best Matches for Motif ID 70 (Highest to Lowest)

Dataset #: 3
Motif ID: 113
Motif name: REST
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 21
Similarity score: 0.0696331

Alignment:
-GGYGCTGTCCATGGTGCTGAA
VRVDGGHACAVDDKGTHCTDWH

Original motif     Consensus sequence: TTCAGCACCATGGACAGCKCC Reverse complement motif     Consensus sequence: GGYGCTGTCCATGGTGCTGAA


Dataset #: 3
Motif ID: 111
Motif name: PPARG
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.55978

Alignment:
--STAGGTCACBGTGACCYABT
VRVDGGHACAVDDKGTHCTDWH

Original motif     Consensus sequence: STAGGTCACBGTGACCYABT Reverse complement motif     Consensus sequence: ABTMGGTCACBGTGACCTAS


Dataset #: 3
Motif ID: 109
Motif name: Pax5
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.564914

Alignment:
--MSGKKRCGCWDCABTGBBCD
VRVDGGHACAVDDKGTHCTDWH

Original motif     Consensus sequence: DGVBCABTGDWGCGKRRCSR Reverse complement motif     Consensus sequence: MSGKKRCGCWDCABTGBBCD


Dataset #: 3
Motif ID: 131
Motif name: znf143
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.566373

Alignment:
GCMWRGCATYRTGGGAMHTB--
VRVDGGHACAVDDKGTHCTDWH

Original motif     Consensus sequence: BAHYTCCCAKMATGCMWYGC Reverse complement motif     Consensus sequence: GCMWRGCATYRTGGGAMHTB


Dataset #: 3
Motif ID: 81
Motif name: ESR1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 1.05195

Alignment:
VDBHMAGGTCACCCTGACCY---
-VRVDGGHACAVDDKGTHCTDWH

Original motif     Consensus sequence: VDBHMAGGTCACCCTGACCY Reverse complement motif     Consensus sequence: MGGTCAGGGTGACCTRDBHV


Dataset #: 3 Motif ID: 71 Motif name: Arnt

Original motif     Consensus sequence: CACGTG Reverse complement motif     Consensus sequence: CACGTG

Best Matches for Motif ID 71 (Highest to Lowest)

Dataset #: 1
Motif ID: 20
Motif name: Motif 20
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0

Alignment:
MACGTG
CACGTG

Original motif     Consensus sequence: CACGTR Reverse complement motif     Consensus sequence: MACGTG


Dataset #: 3
Motif ID: 91
Motif name: MAX
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.00380329

Alignment:
BCACGTGDTD
-CACGTG---

Original motif     Consensus sequence: DAHCACGTGD Reverse complement motif     Consensus sequence: BCACGTGDTD


Dataset #: 3
Motif ID: 126
Motif name: USF1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 6
Similarity score: 0.00445689

Alignment:
MCACGTG
-CACGTG

Original motif     Consensus sequence: CACGTGR Reverse complement motif     Consensus sequence: MCACGTG


Dataset #: 3
Motif ID: 95
Motif name: MYCMAX
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 6
Similarity score: 0.00495292

Alignment:
RASCACGTGGT
---CACGTG--

Original motif     Consensus sequence: RASCACGTGGT Reverse complement motif     Consensus sequence: ACCACGTGSTM


Dataset #: 3
Motif ID: 94
Motif name: Myc
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 6
Similarity score: 0.0173209

Alignment:
DCCACGTGCV
--CACGTG--

Original motif     Consensus sequence: VGCACGTGGH Reverse complement motif     Consensus sequence: DCCACGTGCV


Dataset #: 3 Motif ID: 72 Motif name: ArntAhr

Original motif     Consensus sequence: YGCGTG Reverse complement motif     Consensus sequence: CACGCM

Best Matches for Motif ID 72 (Highest to Lowest)

Dataset #: 3
Motif ID: 86
Motif name: HIF1AARNT
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 6
Similarity score: 0

Alignment:
VBACGTGV
-YGCGTG-

Original motif     Consensus sequence: VBACGTGV Reverse complement motif     Consensus sequence: VCACGTBV


Dataset #: 4
Motif ID: 134
Motif name: ssCGwGCGss
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 6
Similarity score: 0.0128947

Alignment:
BSCGWGCGBV
YGCGTG----

Original motif     Consensus sequence: BSCGWGCGBV Reverse complement motif     Consensus sequence: VBCGCWCGSB


Dataset #: 3
Motif ID: 71
Motif name: Arnt
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0.0203526

Alignment:
CACGTG
YGCGTG

Original motif     Consensus sequence: CACGTG Reverse complement motif     Consensus sequence: CACGTG


Dataset #: 1
Motif ID: 20
Motif name: Motif 20
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 6
Similarity score: 0.0206428

Alignment:
MACGTG
YGCGTG

Original motif     Consensus sequence: CACGTR Reverse complement motif     Consensus sequence: MACGTG


Dataset #: 3
Motif ID: 126
Motif name: USF1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 6
Similarity score: 0.0255609

Alignment:
MCACGTG
-YGCGTG

Original motif     Consensus sequence: CACGTGR Reverse complement motif     Consensus sequence: MCACGTG


Dataset #: 3 Motif ID: 73 Motif name: CREB1

Original motif     Consensus sequence: TGACGTCA Reverse complement motif     Consensus sequence: TGACGTCA

Best Matches for Motif ID 73 (Highest to Lowest)

Dataset #: 3
Motif ID: 92
Motif name: MIZF
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.00956439

Alignment:
GCGGACGTTV
--TGACGTCA

Original motif     Consensus sequence: BAACGTCCGC Reverse complement motif     Consensus sequence: GCGGACGTTV


Dataset #: 3
Motif ID: 115
Motif name: RXRRAR_DR5
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 10
Number of overlap: 8
Similarity score: 0.0133811

Alignment:
TGACCTCKVVBTGAYCK
TGACGTCA---------

Original motif     Consensus sequence: RGKTCABVVRGAGGTCA Reverse complement motif     Consensus sequence: TGACCTCKVVBTGAYCK


Dataset #: 3
Motif ID: 81
Motif name: ESR1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0197902

Alignment:
VDBHMAGGTCACCCTGACCY
---TGACGTCA---------

Original motif     Consensus sequence: VDBHMAGGTCACCCTGACCY Reverse complement motif     Consensus sequence: MGGTCAGGGTGACCTRDBHV


Dataset #: 3
Motif ID: 82
Motif name: ESR2
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.