MOTIFSIM - MOTIF SIMilarity Detection Tool

Version 2.2

INPUT

Input Parameters
Number of files: 1
Number of top significant motifs: 2
Number of best matches: 2
Similarity cutoff >= 0.75
Matching motif database: None
Motif tree: No
Combined similar motifs: No
Output file type: All
Output file format: All

Input files and motif counts
File name Count of motifs Dataset number
U20230323-stremeR.txt 365 1

RESULTS

Top 2 Significant Motifs - Global Matching (Highest to Lowest)

There is no global matching for 1 motif file.


Significant Motifs - Global and Local Matching (Highest to Lowest)

Dataset #: 1 Motif ID: 156 Motif name: Motif 156

Original motif     Consensus sequence: CACTTCCCAGAC Reverse complement motif     Consensus sequence: GTCTGGGAAGTG

Best Matches for Significant Motif ID 156 (Highest to Lowest)

Dataset #: 1
Motif ID: 27
Motif name: Motif 27
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 7
Number of overlap: 12
Similarity score: 0.00564821

Alignment:
CACTTCCCAGACGGGGCG
CACTTCCCAGAC------

Original motif     Consensus sequence: CACTTCCCAGACGGGGCG Reverse complement motif     Consensus sequence: CGCCCCGTCTGGGAAGTG


Dataset #: 1
Motif ID: 95
Motif name: Motif 95
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 6
Number of overlap: 12
Similarity score: 0.0183065

Alignment:
CACCTCCCAGACMGGGT
-----CACTTCCCAGAC

Original motif     Consensus sequence: ACCCYGTCTGGGAGGTG Reverse complement motif     Consensus sequence: CACCTCCCAGACMGGGT


Dataset #: 1 Motif ID: 146 Motif name: Motif 146

Original motif     Consensus sequence: CTGTCACCCC Reverse complement motif     Consensus sequence: GGGGTGACAG

Best Matches for Significant Motif ID 146 (Highest to Lowest)

Dataset #: 1
Motif ID: 1
Motif name: Motif 1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 10
Similarity score: 0.00304976

Alignment:
GGGGTGACAGABGB
----GGGGTGACAG

Original motif     Consensus sequence: GGGGTGACAGABGB Reverse complement motif     Consensus sequence: BCVTCTGTCACCCC


Dataset #: 1
Motif ID: 209
Motif name: Motif 209
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.021009

Alignment:
ATGGGCTGACAG
--GGGGTGACAG

Original motif     Consensus sequence: CTGTCAGCCCAT Reverse complement motif     Consensus sequence: ATGGGCTGACAG



Best Matches for Each Motif (Highest to Lowest)

Dataset #: 1 Motif ID: 1 Motif name: Motif 1

Original motif     Consensus sequence: GGGGTGACAGABGB Reverse complement motif     Consensus sequence: BCVTCTGTCACCCC

Best Matches for Motif ID 1 (Highest to Lowest)

Dataset #: 1
Motif ID: 29
Motif name: Motif 29
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 6
Number of overlap: 14
Similarity score: 0.0644652

Alignment:
CTGGGCRACAGAGYRAGACY
-GGGGTGACAGABGB-----

Original motif     Consensus sequence: CTGGGCRACAGAGYRAGACY Reverse complement motif     Consensus sequence: MGTCTMKCTCTGTKGCCCAG


Dataset #: 1
Motif ID: 178
Motif name: Motif 178
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 6
Number of overlap: 14
Similarity score: 0.0767787

Alignment:
ACTGTCTTCCACCTCCACAT
-BCVTCTGTCACCCC-----

Original motif     Consensus sequence: ACTGTCTTCCACCTCCACAT Reverse complement motif     Consensus sequence: ATGTGGAGGTGGAAGACAGT


Dataset #: 1
Motif ID: 139
Motif name: Motif 139
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 6
Number of overlap: 14
Similarity score: 0.0824915

Alignment:
AGCCYCTGGYAACCAYYAWT
-BCVTCTGTCACCCC-----

Original motif     Consensus sequence: AGCCYCTGGYAACCAYYAWT Reverse complement motif     Consensus sequence: AWTKKTGGTTKCCAGKGGCT


Dataset #: 1 Motif ID: 2 Motif name: Motif 2

Original motif     Consensus sequence: ATTAGCYRGGCRTGGTGGC Reverse complement motif     Consensus sequence: GCCACCAMGCCMKGCTAAT

Best Matches for Motif ID 2 (Highest to Lowest)

Dataset #: 1
Motif ID: 155
Motif name: Motif 155
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 0.0936692

Alignment:
TCCCTCCCGGACGGGGYGGC
-ATTAGCYRGGCRTGGTGGC

Original motif     Consensus sequence: TCCCTCCCGGACGGGGYGGC Reverse complement motif     Consensus sequence: GCCKCCCCGTCCGGGAGGGA


Dataset #: 1
Motif ID: 165
Motif name: Motif 165
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 19
Similarity score: 0.109865

Alignment:
AGCTCMKCCTCCTGTCAGAT
-GCCACCAMGCCMKGCTAAT

Original motif     Consensus sequence: ATCTGACAGGAGGYRGAGCT Reverse complement motif     Consensus sequence: AGCTCMKCCTCCTGTCAGAT


Dataset #: 1 Motif ID: 3 Motif name: Motif 3

Original motif     Consensus sequence: GCTGGAGTGCAGTGGCRYGA Reverse complement motif     Consensus sequence: TCKMGCCACTGCACTCCAGC

Best Matches for Motif ID 3 (Highest to Lowest)

Dataset #: 1
Motif ID: 350
Motif name: Motif 350
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.100707

Alignment:
TCTGGAGTGGACCTCCAGCA
GCTGGAGTGCAGTGGCRYGA

Original motif     Consensus sequence: TCTGGAGTGGACCTCCAGCA Reverse complement motif     Consensus sequence: TGCTGGAGGTCCACTCCAGA


Dataset #: 1
Motif ID: 100
Motif name: Motif 100
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.113987

Alignment:
GCTGGCCCGCAAGCGCCGCG
GCTGGAGTGCAGTGGCRYGA

Original motif     Consensus sequence: GCTGGCCCGCAAGCGCCGCG Reverse complement motif     Consensus sequence: CGCGGCGCTTGCGGGCCAGC


Dataset #: 1 Motif ID: 4 Motif name: Motif 4

Original motif     Consensus sequence: GCTGGGATTACAGG Reverse complement motif     Consensus sequence: CCTGTAATCCCAGC

Best Matches for Motif ID 4 (Highest to Lowest)

Dataset #: 1
Motif ID: 191
Motif name: Motif 191
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0598063

Alignment:
AAAGTGCCGAGAKTGCAGC
-----GCTGGGATTACAGG

Original motif     Consensus sequence: AAAGTGCCGAGAKTGCAGC Reverse complement motif     Consensus sequence: GCTGCARTCTCGGCACTTT


Dataset #: 1
Motif ID: 294
Motif name: Motif 294
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 6
Number of overlap: 14
Similarity score: 0.0659358

Alignment:
GTGGCCCTCTTCTCACAGCT
-----CCTGTAATCCCAGC-

Original motif     Consensus sequence: AGCTGTGAGAAGAGGGCCAC Reverse complement motif     Consensus sequence: GTGGCCCTCTTCTCACAGCT


Dataset #: 1 Motif ID: 5 Motif name: Motif 5

Original motif     Consensus sequence: CCTCRGCCTCC Reverse complement motif     Consensus sequence: GGAGGCKGAGG

Best Matches for Motif ID 5 (Highest to Lowest)

Dataset #: 1
Motif ID: 26
Motif name: Motif 26
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 11
Similarity score: 0.0355603

Alignment:
CTCCTGCCTCAGCCTCCCRA
------CCTCRGCCTCC---

Original motif     Consensus sequence: CTCCTGCCTCAGCCTCCCRA Reverse complement motif     Consensus sequence: TMGGGAGGCTGAGGCAGGAG


Dataset #: 1
Motif ID: 105
Motif name: Motif 105
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.0494199

Alignment:
GCCTCTCCCTCCACACCTCC
-CCTCRGCCTCC--------

Original motif     Consensus sequence: GCCTCTCCCTCCACACCTCC Reverse complement motif     Consensus sequence: GGAGGTGTGGAGGGAGAGGC


Dataset #: 1 Motif ID: 6 Motif name: Motif 6

Original motif     Consensus sequence: GCTCACTGCAASCTC Reverse complement motif     Consensus sequence: GAGSTTGCAGTGAGC

Best Matches for Motif ID 6 (Highest to Lowest)

Dataset #: 1
Motif ID: 178
Motif name: Motif 178
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 6
Number of overlap: 15
Similarity score: 0.0768829

Alignment:
ATGTGGAGGTGGAAGACAGT
-----GAGSTTGCAGTGAGC

Original motif     Consensus sequence: ACTGTCTTCCACCTCCACAT Reverse complement motif     Consensus sequence: ATGTGGAGGTGGAAGACAGT


Dataset #: 1
Motif ID: 292
Motif name: Motif 292
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 15
Similarity score: 0.0774202

Alignment:
AAGACCTTCCAGTGGGACAA
--GAGSTTGCAGTGAGC---

Original motif     Consensus sequence: AAGACCTTCCAGTGGGACAA Reverse complement motif     Consensus sequence: TTGTCCCACTGGAAGGTCTT


Dataset #: 1 Motif ID: 7 Motif name: Motif 7

Original motif     Consensus sequence: GTCTCWAMAAAAAAWAMAAA Reverse complement motif     Consensus sequence: TTTYTWTTTTTTYTWGAGAC

Best Matches for Motif ID 7 (Highest to Lowest)

Dataset #: 1
Motif ID: 145
Motif name: Motif 145
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.0958672

Alignment:
GCCAGTCACAAAARGACAMA
GTCTCWAMAAAAAAWAMAAA

Original motif     Consensus sequence: GCCAGTCACAAAARGACAMA Reverse complement motif     Consensus sequence: TYTGTCMTTTTGTGACTGGC


Dataset #: 1
Motif ID: 261
Motif name: Motif 261
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 19
Similarity score: 0.598351

Alignment:
ATCTCASAAATCACCACTA-
GTCTCWAMAAAAAAWAMAAA

Original motif     Consensus sequence: ATCTCASAAATCACCACTA Reverse complement motif     Consensus sequence: TAGTGGTGATTTSTGAGAT


Dataset #: 1 Motif ID: 8 Motif name: Motif 8

Original motif     Consensus sequence: ATCRCTTGAGSYCAGGAGKT Reverse complement motif     Consensus sequence: ARCTCCTGKSCTCAAGKGAT

Best Matches for Motif ID 8 (Highest to Lowest)

Dataset #: 1
Motif ID: 139
Motif name: Motif 139
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.0757564

Alignment:
AGCCYCTGGYAACCAYYAWT
ARCTCCTGKSCTCAAGKGAT

Original motif     Consensus sequence: AGCCYCTGGYAACCAYYAWT Reverse complement motif     Consensus sequence: AWTKKTGGTTKCCAGKGGCT


Dataset #: 1
Motif ID: 119
Motif name: Motif 119
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.0854742

Alignment:
KKCACCTTGATCTTGGACTT
ATCRCTTGAGSYCAGGAGKT

Original motif     Consensus sequence: AAGTCCAAGATCAAGGTGYY Reverse complement motif     Consensus sequence: KKCACCTTGATCTTGGACTT


Dataset #: 1 Motif ID: 9 Motif name: Motif 9

Original motif     Consensus sequence: CACATGGAGC Reverse complement motif     Consensus sequence: GCTCCATGTG

Best Matches for Motif ID 9 (Highest to Lowest)

Dataset #: 1
Motif ID: 353
Motif name: Motif 353
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.0442841

Alignment:
GCTTCCATGTG
-GCTCCATGTG

Original motif     Consensus sequence: CACATGGAAGC Reverse complement motif     Consensus sequence: GCTTCCATGTG


Dataset #: 1
Motif ID: 326
Motif name: Motif 326
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0461936

Alignment:
GACATGGAGTCAAAGG
CACATGGAGC------

Original motif     Consensus sequence: GACATGGAGTCAAAGG Reverse complement motif     Consensus sequence: CCTTTGACTCCATGTC


Dataset #: 1 Motif ID: 10 Motif name: Motif 10

Original motif     Consensus sequence: AGGASCSTCYSWGCCMGGY Reverse complement motif     Consensus sequence: MCCYGGCWSMGASGSTCCT

Best Matches for Motif ID 10 (Highest to Lowest)

Dataset #: 1
Motif ID: 43
Motif name: Motif 43
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 19
Similarity score: 0.0458009

Alignment:
GCCAGGCAGAGRGKCTCCT
MCCYGGCWSMGASGSTCCT

Original motif     Consensus sequence: GCCAGGCAGAGRGKCTCCT Reverse complement motif     Consensus sequence: AGGAGRCMCTCTGCCTGGC


Dataset #: 1
Motif ID: 30
Motif name: Motif 30
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 19
Similarity score: 0.0489869

Alignment:
AGGAGCGCCTCTKCCCGGC
AGGASCSTCYSWGCCMGGY

Original motif     Consensus sequence: AGGAGCGCCTCTKCCCGGC Reverse complement motif     Consensus sequence: GCCGGGRAGAGGCGCTCCT


Dataset #: 1 Motif ID: 11 Motif name: Motif 11

Original motif     Consensus sequence: CTCAAGGTCCA Reverse complement motif     Consensus sequence: TGGACCTTGAG

Best Matches for Motif ID 11 (Highest to Lowest)

Dataset #: 1
Motif ID: 350
Motif name: Motif 350
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 8
Number of overlap: 11
Similarity score: 0.0546726

Alignment:
TGCTGGAGGTCCACTCCAGA
--CTCAAGGTCCA-------

Original motif     Consensus sequence: TCTGGAGTGGACCTCCAGCA Reverse complement motif     Consensus sequence: TGCTGGAGGTCCACTCCAGA


Dataset #: 1
Motif ID: 104
Motif name: Motif 104
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 10
Number of overlap: 11
Similarity score: 0.054717

Alignment:
CTCCAGKTMCATCCATGTTG
CTCAAGGTCCA---------

Original motif     Consensus sequence: CAACATGGATGRARCTGGAG Reverse complement motif     Consensus sequence: CTCCAGKTMCATCCATGTTG


Dataset #: 1 Motif ID: 12 Motif name: Motif 12

Original motif     Consensus sequence: AGACCAGCCTGGCCAAC Reverse complement motif     Consensus sequence: GTTGGCCAGGCTGGTCT

Best Matches for Motif ID 12 (Highest to Lowest)

Dataset #: 1
Motif ID: 170
Motif name: Motif 170
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 17
Similarity score: 0.0789836

Alignment:
ATTGATMKCCAGGGTTGATT
---GTTGGCCAGGCTGGTCT

Original motif     Consensus sequence: AATCAACCCTGGYRATCAAT Reverse complement motif     Consensus sequence: ATTGATMKCCAGGGTTGATT


Dataset #: 1
Motif ID: 292
Motif name: Motif 292
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 17
Similarity score: 0.0836974

Alignment:
AAGACCTTCCAGTGGGACAA
-AGACCAGCCTGGCCAAC--

Original motif     Consensus sequence: AAGACCTTCCAGTGGGACAA Reverse complement motif     Consensus sequence: TTGTCCCACTGGAAGGTCTT


Dataset #: 1 Motif ID: 13 Motif name: Motif 13

Original motif     Consensus sequence: AAGCAGGGCGAGGCATTGCC Reverse complement motif     Consensus sequence: GGCAATGCCTCGCCCTGCTT

Best Matches for Motif ID 13 (Highest to Lowest)

Dataset #: 1
Motif ID: 96
Motif name: Motif 96
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.0876504

Alignment:
AAGCTGAGGGAGCCGGCTCC
AAGCAGGGCGAGGCATTGCC

Original motif     Consensus sequence: AAGCTGAGGGAGCCGGCTCC Reverse complement motif     Consensus sequence: GGAGCCGGCTCCCTCAGCTT


Dataset #: 1
Motif ID: 43
Motif name: Motif 43
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 19
Similarity score: 0.603866

Alignment:
AGGAGRCMCTCTGCCTGGC-
GGCAATGCCTCGCCCTGCTT

Original motif     Consensus sequence: GCCAGGCAGAGRGKCTCCT Reverse complement motif     Consensus sequence: AGGAGRCMCTCTGCCTGGC


Dataset #: 1 Motif ID: 14 Motif name: Motif 14

Original motif     Consensus sequence: ACCTGGAAAATCGGGTCACT Reverse complement motif     Consensus sequence: AGTGACCCGATTTTCCAGGT

Best Matches for Motif ID 14 (Highest to Lowest)

Dataset #: 1
Motif ID: 56
Motif name: Motif 56
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.120636

Alignment:
GCCKGGMKCMGTGGCTCAKG
ACCTGGAAAATCGGGTCACT

Original motif     Consensus sequence: CRTGAGCCACYGYRCCYGGC Reverse complement motif     Consensus sequence: GCCKGGMKCMGTGGCTCAKG


Dataset #: 1
Motif ID: 294
Motif name: Motif 294
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 19
Similarity score: 0.604557

Alignment:
-GTGGCCCTCTTCTCACAGCT
AGTGACCCGATTTTCCAGGT-

Original motif     Consensus sequence: AGCTGTGAGAAGAGGGCCAC Reverse complement motif     Consensus sequence: GTGGCCCTCTTCTCACAGCT


Dataset #: 1 Motif ID: 15 Motif name: Motif 15

Original motif     Consensus sequence: CTTGCGCTTCCCRRGTGA Reverse complement motif     Consensus sequence: TCACKMGGGAAGCGCAAG

Best Matches for Motif ID 15 (Highest to Lowest)

Dataset #: 1
Motif ID: 350
Motif name: Motif 350
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 18
Similarity score: 0.112624

Alignment:
TCTGGAGTGGACCTCCAGCA
TCACKMGGGAAGCGCAAG--

Original motif     Consensus sequence: TCTGGAGTGGACCTCCAGCA Reverse complement motif     Consensus sequence: TGCTGGAGGTCCACTCCAGA


Dataset #: 1
Motif ID: 164
Motif name: Motif 164
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 18
Similarity score: 0.117199

Alignment:
GCGMGCGGGAACCGGGGCT
TCACKMGGGAAGCGCAAG-

Original motif     Consensus sequence: AGCCCCGGTTCCCGCYCGC Reverse complement motif     Consensus sequence: GCGMGCGGGAACCGGGGCT


Dataset #: 1 Motif ID: 16 Motif name: Motif 16

Original motif     Consensus sequence: GAAAGGGAACTCCCTGACCC Reverse complement motif     Consensus sequence: GGGTCAGGGAGTTCCCTTTC

Best Matches for Motif ID 16 (Highest to Lowest)

Dataset #: 1
Motif ID: 293
Motif name: Motif 293
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.122102

Alignment:
CTGACTGGGAGACACCTCCC
GGGTCAGGGAGTTCCCTTTC

Original motif     Consensus sequence: CTGACTGGGAGACACCTCCC Reverse complement motif     Consensus sequence: GGGAGGTGTCTCCCAGTCAG


Dataset #: 1
Motif ID: 96
Motif name: Motif 96
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 0.615331

Alignment:
AAGCTGAGGGAGCCGGCTCC-
-GGGTCAGGGAGTTCCCTTTC

Original motif     Consensus sequence: AAGCTGAGGGAGCCGGCTCC Reverse complement motif     Consensus sequence: GGAGCCGGCTCCCTCAGCTT


Dataset #: 1 Motif ID: 17 Motif name: Motif 17

Original motif     Consensus sequence: AGACAGTGGGYGCAGGHCA Reverse complement motif     Consensus sequence: TGHCCTGCKCCCACTGTCT

Best Matches for Motif ID 17 (Highest to Lowest)

Dataset #: 1
Motif ID: 65
Motif name: Motif 65
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 0.0792941

Alignment:
CGGCGCTGMGCTCGATTTCT
-TGHCCTGCKCCCACTGTCT

Original motif     Consensus sequence: AGAAATCGAGCRCAGCGCCG Reverse complement motif     Consensus sequence: CGGCGCTGMGCTCGATTTCT


Dataset #: 1
Motif ID: 312
Motif name: Motif 312
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 19
Similarity score: 0.0967987

Alignment:
AGGACTGAGGGTGCCYRGGG
-AGACAGTGGGYGCAGGHCA

Original motif     Consensus sequence: AGGACTGAGGGTGCCYRGGG Reverse complement motif     Consensus sequence: CCCMKGGCACCCTCAGTCCT


Dataset #: 1 Motif ID: 18 Motif name: Motif 18

Original motif     Consensus sequence: GAAAAGCGCAGTATTMGGG Reverse complement motif     Consensus sequence: CCCYAATACTGCGCTTTTC

Best Matches for Motif ID 18 (Highest to Lowest)

Dataset #: 1
Motif ID: 160
Motif name: Motif 160
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 19
Similarity score: 0.112986

Alignment:
AAATTACCCAGTCTCAGGTA
GAAAAGCGCAGTATTMGGG-

Original motif     Consensus sequence: AAATTACCCAGTCTCAGGTA Reverse complement motif     Consensus sequence: TACCTGAGACTGGGTAATTT


Dataset #: 1
Motif ID: 195
Motif name: Motif 195
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 0.113548

Alignment:
ACCCAATWTGTAGTCTTTTA
-CCCYAATACTGCGCTTTTC

Original motif     Consensus sequence: TAAAAGACTACAWATTGGGT Reverse complement motif     Consensus sequence: ACCCAATWTGTAGTCTTTTA


Dataset #: 1 Motif ID: 19 Motif name: Motif 19

Original motif     Consensus sequence: CACCAGGAGATTATATCCCR Reverse complement motif     Consensus sequence: MGGGATATAATCTCCTGGTG

Best Matches for Motif ID 19 (Highest to Lowest)

Dataset #: 1
Motif ID: 99
Motif name: Motif 99
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.11753

Alignment:
AATGAKATCATGTCYTTTGC
MGGGATATAATCTCCTGGTG

Original motif     Consensus sequence: GCAAAKGACATGATYTCATT Reverse complement motif     Consensus sequence: AATGAKATCATGTCYTTTGC


Dataset #: 1
Motif ID: 262
Motif name: Motif 262
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 19
Similarity score: 0.601395

Alignment:
-GACAGGAGATTAACACTGAG
CACCAGGAGATTATATCCCR-

Original motif     Consensus sequence: CTCAGTGTTAATCTCCTGTC Reverse complement motif     Consensus sequence: GACAGGAGATTAACACTGAG


Dataset #: 1 Motif ID: 20 Motif name: Motif 20

Original motif     Consensus sequence: ACAATGGACC Reverse complement motif     Consensus sequence: GGTCCATTGT

Best Matches for Motif ID 20 (Highest to Lowest)

Dataset #: 1
Motif ID: 193
Motif name: Motif 193
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 10
Similarity score: 0.0500147

Alignment:
GKCTGTACCCCCATTGTAT
-------GGTCCATTGT--

Original motif     Consensus sequence: ATACAATGGGGGTACAGRC Reverse complement motif     Consensus sequence: GKCTGTACCCCCATTGTAT


Dataset #: 1
Motif ID: 322
Motif name: Motif 322
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 7
Number of overlap: 10
Similarity score: 0.059291

Alignment:
GCAWSTGCAAAGGCCCT
------ACAATGGACC-

Original motif     Consensus sequence: AGGGCCTTTGCASWTGC Reverse complement motif     Consensus sequence: GCAWSTGCAAAGGCCCT


Dataset #: 1 Motif ID: 21 Motif name: Motif 21

Original motif     Consensus sequence: GCCGTTTKTTAAGCCCGTY Reverse complement motif     Consensus sequence: KACGGGCTTAARAAACGGC

Best Matches for Motif ID 21 (Highest to Lowest)

Dataset #: 1
Motif ID: 86
Motif name: Motif 86
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 18
Similarity score: 0.0915321

Alignment:
AGTAGGTGCTCARTAAATRB-
--KACGGGCTTAARAAACGGC

Original motif     Consensus sequence: AGTAGGTGCTCARTAAATRB Reverse complement motif     Consensus sequence: VMATTTAKTGAGCACCTACT


Dataset #: 1
Motif ID: 137
Motif name: Motif 137
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 18
Similarity score: 0.0978691

Alignment:
TWTACCTATGTAACAAACCT-
--KACGGGCTTAARAAACGGC

Original motif     Consensus sequence: AGGTTTGTTACATAGGTAWA Reverse complement motif     Consensus sequence: TWTACCTATGTAACAAACCT


Dataset #: 1 Motif ID: 22 Motif name: Motif 22

Original motif     Consensus sequence: ATCTCAGACKRY Reverse complement motif     Consensus sequence: KMRGTCTGAGAT

Best Matches for Motif ID 22 (Highest to Lowest)

Dataset #: 1
Motif ID: 36
Motif name: Motif 36
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 6
Number of overlap: 12
Similarity score: 0.0496789

Alignment:
ACATCCCAGACGATGGGCG
--ATCTCAGACKRY-----

Original motif     Consensus sequence: ACATCCCAGACGATGGGCG Reverse complement motif     Consensus sequence: CGCCCATCGTCTGGGATGT


Dataset #: 1
Motif ID: 261
Motif name: Motif 261
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 8
Number of overlap: 12
Similarity score: 0.0600848

Alignment:
TAGTGGTGATTTSTGAGAT
-------KMRGTCTGAGAT

Original motif     Consensus sequence: ATCTCASAAATCACCACTA Reverse complement motif     Consensus sequence: TAGTGGTGATTTSTGAGAT


Dataset #: 1 Motif ID: 23 Motif name: Motif 23

Original motif     Consensus sequence: GGTTCATCTCACTAGGGAGT Reverse complement motif     Consensus sequence: ACTCCCTAGTGAGATGAACC

Best Matches for Motif ID 23 (Highest to Lowest)

Dataset #: 1
Motif ID: 201
Motif name: Motif 201
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 19
Similarity score: 0.104804

Alignment:
-GTAACACTCACCGCGARGGT
GGTTCATCTCACTAGGGAGT-

Original motif     Consensus sequence: GTAACACTCACCGCGARGGT Reverse complement motif     Consensus sequence: ACCKTCGCGGTGAGTGTTAC


Dataset #: 1
Motif ID: 225
Motif name: Motif 225
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 0.108413

Alignment:
AAGTTCTKGGKTACATGTGC-
-ACTCCCTAGTGAGATGAACC

Original motif     Consensus sequence: GCACATGTAYCCYAGAACTT Reverse complement motif     Consensus sequence: AAGTTCTKGGKTACATGTGC


Dataset #: 1 Motif ID: 24 Motif name: Motif 24

Original motif     Consensus sequence: CKAGTCAAAGAAA Reverse complement motif     Consensus sequence: TTTCTTTGACTRG

Best Matches for Motif ID 24 (Highest to Lowest)

Dataset #: 1
Motif ID: 274
Motif name: Motif 274
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 13
Similarity score: 0.0524968

Alignment:
CTGGTCAAGGAAA
CKAGTCAAAGAAA

Original motif     Consensus sequence: CTGGTCAAGGAAA Reverse complement motif     Consensus sequence: TTTCCTTGACCAG


Dataset #: 1
Motif ID: 23
Motif name: Motif 23
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 6
Number of overlap: 13
Similarity score: 0.0775612

Alignment:
ACTCCCTAGTGAGATGAACC
--CKAGTCAAAGAAA-----

Original motif     Consensus sequence: GGTTCATCTCACTAGGGAGT Reverse complement motif     Consensus sequence: ACTCCCTAGTGAGATGAACC


Dataset #: 1 Motif ID: 25 Motif name: Motif 25

Original motif     Consensus sequence: CATTTCCAWCTGAGGTAC Reverse complement motif     Consensus sequence: GTACCTCAGWTGGAAATG

Best Matches for Motif ID 25 (Highest to Lowest)

Dataset #: 1
Motif ID: 179
Motif name: Motif 179
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 18
Similarity score: 0.0987898

Alignment:
GAATACCTCCTGAAGGACCT
CATTTCCAWCTGAGGTAC--

Original motif     Consensus sequence: AGGTCCTTCAGGAGGTATTC Reverse complement motif     Consensus sequence: GAATACCTCCTGAAGGACCT


Dataset #: 1
Motif ID: 332
Motif name: Motif 332
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 18
Similarity score: 0.110707

Alignment:
GTTTAACCATTGAGGGCCAG
CATTTCCAWCTGAGGTAC--

Original motif     Consensus sequence: CTGGCCCTCAATGGTTAAAC Reverse complement motif     Consensus sequence: GTTTAACCATTGAGGGCCAG


Dataset #: 1 Motif ID: 26 Motif name: Motif 26

Original motif     Consensus sequence: CTCCTGCCTCAGCCTCCCRA Reverse complement motif     Consensus sequence: TMGGGAGGCTGAGGCAGGAG

Best Matches for Motif ID 26 (Highest to Lowest)

Dataset #: 1
Motif ID: 67
Motif name: Motif 67
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.0991184

Alignment:
CACCAGACTCAGGAGCCCAG
CTCCTGCCTCAGCCTCCCRA

Original motif     Consensus sequence: CTGGGCTCCTGAGTCTGGTG Reverse complement motif     Consensus sequence: CACCAGACTCAGGAGCCCAG


Dataset #: 1
Motif ID: 104
Motif name: Motif 104
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.111358

Alignment:
CAACATGGATGRARCTGGAG
TMGGGAGGCTGAGGCAGGAG

Original motif     Consensus sequence: CAACATGGATGRARCTGGAG Reverse complement motif     Consensus sequence: CTCCAGKTMCATCCATGTTG


Dataset #: 1 Motif ID: 27 Motif name: Motif 27

Original motif     Consensus sequence: CACTTCCCAGACGGGGCG Reverse complement motif     Consensus sequence: CGCCCCGTCTGGGAAGTG

Best Matches for Motif ID 27 (Highest to Lowest)

Dataset #: 1
Motif ID: 45
Motif name: Motif 45
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 18
Similarity score: 0.0413095

Alignment:
CACTTTCCAGACTGGGCA
CACTTCCCAGACGGGGCG

Original motif     Consensus sequence: TGCCCAGTCTGGAAAGTG Reverse complement motif     Consensus sequence: CACTTTCCAGACTGGGCA


Dataset #: 1
Motif ID: 155
Motif name: Motif 155
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 18
Similarity score: 0.0525092

Alignment:
TCCCTCCCGGACGGGGYGGC
CACTTCCCAGACGGGGCG--

Original motif     Consensus sequence: TCCCTCCCGGACGGGGYGGC Reverse complement motif     Consensus sequence: GCCKCCCCGTCCGGGAGGGA


Dataset #: 1 Motif ID: 28 Motif name: Motif 28

Original motif     Consensus sequence: GTCACCCCATT Reverse complement motif     Consensus sequence: AATGGGGTGAC

Best Matches for Motif ID 28 (Highest to Lowest)

Dataset #: 1
Motif ID: 193
Motif name: Motif 193
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 11
Similarity score: 0.0423623

Alignment:
ATACAATGGGGGTACAGRC
----AATGGGGTGAC----

Original motif     Consensus sequence: ATACAATGGGGGTACAGRC Reverse complement motif     Consensus sequence: GKCTGTACCCCCATTGTAT


Dataset #: 1
Motif ID: 14
Motif name: Motif 14
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.0486677

Alignment:
AGTGACCCGATTTTCCAGGT
--------GTCACCCCATT-

Original motif     Consensus sequence: ACCTGGAAAATCGGGTCACT Reverse complement motif     Consensus sequence: AGTGACCCGATTTTCCAGGT


Dataset #: 1 Motif ID: 29 Motif name: Motif 29

Original motif     Consensus sequence: CTGGGCRACAGAGYRAGACY Reverse complement motif     Consensus sequence: MGTCTMKCTCTGTKGCCCAG

Best Matches for Motif ID 29 (Highest to Lowest)

Dataset #: 1
Motif ID: 109
Motif name: Motif 109
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.0944011

Alignment:
TCTCTCTCTCTCTCTCTCTC
MGTCTMKCTCTGTKGCCCAG

Original motif     Consensus sequence: GAGAGAGAGAGAGAGAGAGA Reverse complement motif     Consensus sequence: TCTCTCTCTCTCTCTCTCTC


Dataset #: 1
Motif ID: 67
Motif name: Motif 67
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.100789

Alignment:
CTGGGCTCCTGAGTCTGGTG
CTGGGCRACAGAGYRAGACY

Original motif     Consensus sequence: CTGGGCTCCTGAGTCTGGTG Reverse complement motif     Consensus sequence: CACCAGACTCAGGAGCCCAG


Dataset #: 1 Motif ID: 30 Motif name: Motif 30

Original motif     Consensus sequence: AGGAGCGCCTCTKCCCGGC Reverse complement motif     Consensus sequence: GCCGGGRAGAGGCGCTCCT

Best Matches for Motif ID 30 (Highest to Lowest)

Dataset #: 1
Motif ID: 43
Motif name: Motif 43
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 19
Similarity score: 0.0399316

Alignment:
AGGAGRCMCTCTGCCTGGC
AGGAGCGCCTCTKCCCGGC

Original motif     Consensus sequence: GCCAGGCAGAGRGKCTCCT Reverse complement motif     Consensus sequence: AGGAGRCMCTCTGCCTGGC


Dataset #: 1
Motif ID: 10
Motif name: Motif 10
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 19
Similarity score: 0.0610031

Alignment:
AGGASCSTCYSWGCCMGGY
AGGAGCGCCTCTKCCCGGC

Original motif     Consensus sequence: AGGASCSTCYSWGCCMGGY Reverse complement motif     Consensus sequence: MCCYGGCWSMGASGSTCCT


Dataset #: 1 Motif ID: 31 Motif name: Motif 31

Original motif     Consensus sequence: CCGTGCGCGAGCCG Reverse complement motif     Consensus sequence: CGGCTCGCGCACGG

Best Matches for Motif ID 31 (Highest to Lowest)

Dataset #: 1
Motif ID: 299
Motif name: Motif 299
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0706247

Alignment:
TTGGAGGTTCTAGCAGGG
----CGGCTCGCGCACGG

Original motif     Consensus sequence: CCCTGCTAGAACCTCCAA Reverse complement motif     Consensus sequence: TTGGAGGTTCTAGCAGGG


Dataset #: 1
Motif ID: 48
Motif name: Motif 48
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 14
Similarity score: 0.0742371

Alignment:
AGCTCCCAGCGTGAGCGACG
----CCGTGCGCGAGCCG--

Original motif     Consensus sequence: AGCTCCCAGCGTGAGCGACG Reverse complement motif     Consensus sequence: CGTCGCTCACGCTGGGAGCT


Dataset #: 1 Motif ID: 32 Motif name: Motif 32

Original motif     Consensus sequence: ATGGTGAAACCC Reverse complement motif     Consensus sequence: GGGTTTCACCAT

Best Matches for Motif ID 32 (Highest to Lowest)

Dataset #: 1
Motif ID: 61
Motif name: Motif 61
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 9
Number of overlap: 12
Similarity score: 0.0712132

Alignment:
TGGCTTCACCCAGTGGATCC
GGGTTTCACCAT--------

Original motif     Consensus sequence: GGATCCACTGGGTGAAGCCA Reverse complement motif     Consensus sequence: TGGCTTCACCCAGTGGATCC


Dataset #: 1
Motif ID: 204
Motif name: Motif 204
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 12
Similarity score: 0.0785008

Alignment:
AGAGYRAGACTCC
ATGGTGAAACCC-

Original motif     Consensus sequence: AGAGYRAGACTCC Reverse complement motif     Consensus sequence: GGAGTCTMKCTCT


Dataset #: 1 Motif ID: 33 Motif name: Motif 33

Original motif     Consensus sequence: ACGCCCACGGAGTCTC Reverse complement motif     Consensus sequence: GAGACTCCGTGGGCGT

Best Matches for Motif ID 33 (Highest to Lowest)

Dataset #: 1
Motif ID: 291
Motif name: Motif 291
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 16
Similarity score: 0.0890595

Alignment:
CTGAGGACCTGAGGTCRTA
--GAGACTCCGTGGGCGT-

Original motif     Consensus sequence: CTGAGGACCTGAGGTCRTA Reverse complement motif     Consensus sequence: TAMGACCTCAGGTCCTCAG


Dataset #: 1
Motif ID: 159
Motif name: Motif 159
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 16
Similarity score: 0.100481

Alignment:
TGCTCACACAAAGCCTGT
-ACGCCCACGGAGTCTC-

Original motif     Consensus sequence: ACAGGCTTTGTGTGAGCA Reverse complement motif     Consensus sequence: TGCTCACACAAAGCCTGT


Dataset #: 1 Motif ID: 34 Motif name: Motif 34

Original motif     Consensus sequence: GGACGCACA Reverse complement motif     Consensus sequence: TGTGCGTCC

Best Matches for Motif ID 34 (Highest to Lowest)

Dataset #: 1
Motif ID: 314
Motif name: Motif 314
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 9
Similarity score: 0.0220227

Alignment:
ATGTGCGTTCC
-TGTGCGTCC-

Original motif     Consensus sequence: GGAACGCACAT Reverse complement motif     Consensus sequence: ATGTGCGTTCC


Dataset #: 1
Motif ID: 87
Motif name: Motif 87
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 9
Similarity score: 0.0275308

Alignment:
GGACACACATG
GGACGCACA--

Original motif     Consensus sequence: CATGTGTGTCC Reverse complement motif     Consensus sequence: GGACACACATG


Dataset #: 1 Motif ID: 35 Motif name: Motif 35

Original motif     Consensus sequence: CAGAAATCACCCGTCTT Reverse complement motif     Consensus sequence: AAGACGGGTGATTTCTG

Best Matches for Motif ID 35 (Highest to Lowest)

Dataset #: 1
Motif ID: 85
Motif name: Motif 85
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 17
Similarity score: 0.104456

Alignment:
TGGAGAACCTTTATGTCTAG
--AAGACGGGTGATTTCTG-

Original motif     Consensus sequence: CTAGACATAAAGGTTCTCCA Reverse complement motif     Consensus sequence: TGGAGAACCTTTATGTCTAG


Dataset #: 1
Motif ID: 191
Motif name: Motif 191
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 17
Similarity score: 0.109156

Alignment:
GCTGCARTCTCGGCACTTT
-CAGAAATCACCCGTCTT-

Original motif     Consensus sequence: AAAGTGCCGAGAKTGCAGC Reverse complement motif     Consensus sequence: GCTGCARTCTCGGCACTTT


Dataset #: 1 Motif ID: 36 Motif name: Motif 36

Original motif     Consensus sequence: ACATCCCAGACGATGGGCG Reverse complement motif     Consensus sequence: CGCCCATCGTCTGGGATGT

Best Matches for Motif ID 36 (Highest to Lowest)

Dataset #: 1
Motif ID: 155
Motif name: Motif 155
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 19
Similarity score: 0.102313

Alignment:
GCCKCCCCGTCCGGGAGGGA
CGCCCATCGTCTGGGATGT-

Original motif     Consensus sequence: TCCCTCCCGGACGGGGYGGC Reverse complement motif     Consensus sequence: GCCKCCCCGTCCGGGAGGGA


Dataset #: 1
Motif ID: 176
Motif name: Motif 176
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 19
Similarity score: 0.105478

Alignment:
AACAACASACACTGGGGCCT
-ACATCCCAGACGATGGGCG

Original motif     Consensus sequence: AGGCCCCAGTGTSTGTTGTT Reverse complement motif     Consensus sequence: AACAACASACACTGGGGCCT


Dataset #: 1 Motif ID: 37 Motif name: Motif 37

Original motif     Consensus sequence: CCTTGAGAGCW Reverse complement motif     Consensus sequence: WGCTCTCAAGG

Best Matches for Motif ID 37 (Highest to Lowest)

Dataset #: 1
Motif ID: 332
Motif name: Motif 332
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 11
Similarity score: 0.0617144

Alignment:
GTTTAACCATTGAGGGCCAG
-------CCTTGAGAGCW--

Original motif     Consensus sequence: CTGGCCCTCAATGGTTAAAC Reverse complement motif     Consensus sequence: GTTTAACCATTGAGGGCCAG


Dataset #: 1
Motif ID: 303
Motif name: Motif 303
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0637615

Alignment:
AGTTCTTAAAGATGGT
WGCTCTCAAGG-----

Original motif     Consensus sequence: AGTTCTTAAAGATGGT Reverse complement motif     Consensus sequence: ACCATCTTTAAGAACT


Dataset #: 1 Motif ID: 38 Motif name: Motif 38

Original motif     Consensus sequence: GCAGTGAGCYRAGA Reverse complement motif     Consensus sequence: TCTMKGCTCACTGC

Best Matches for Motif ID 38 (Highest to Lowest)

Dataset #: 1
Motif ID: 294
Motif name: Motif 294
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 14
Similarity score: 0.0688783

Alignment:
GTGGCCCTCTTCTCACAGCT
-----TCTMKGCTCACTGC-

Original motif     Consensus sequence: AGCTGTGAGAAGAGGGCCAC Reverse complement motif     Consensus sequence: GTGGCCCTCTTCTCACAGCT


Dataset #: 1
Motif ID: 64
Motif name: Motif 64
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 7
Number of overlap: 14
Similarity score: 0.0904176

Alignment:
GAAGGCAGCTAAGGCCCGGY
GCAGTGAGCYRAGA------

Original motif     Consensus sequence: GAAGGCAGCTAAGGCCCGGY Reverse complement motif     Consensus sequence: KCCGGGCCTTAGCTGCCTTC


Dataset #: 1 Motif ID: 39 Motif name: Motif 39

Original motif     Consensus sequence: AGGCGGCTGGGAGG Reverse complement motif     Consensus sequence: CCTCCCAGCCGCCT

Best Matches for Motif ID 39 (Highest to Lowest)

Dataset #: 1
Motif ID: 10
Motif name: Motif 10
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0839569

Alignment:
AGGASCSTCYSWGCCMGGY
CCTCCCAGCCGCCT-----

Original motif     Consensus sequence: AGGASCSTCYSWGCCMGGY Reverse complement motif     Consensus sequence: MCCYGGCWSMGASGSTCCT


Dataset #: 1
Motif ID: 68
Motif name: Motif 68
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 14
Similarity score: 0.0883656

Alignment:
GACCTGCAGCCCGCCATG
--CCTCCCAGCCGCCT--

Original motif     Consensus sequence: CATGGCGGGCTGCAGGTC Reverse complement motif     Consensus sequence: GACCTGCAGCCCGCCATG


Dataset #: 1 Motif ID: 40 Motif name: Motif 40

Original motif     Consensus sequence: ACTTTGGGAGGC Reverse complement motif     Consensus sequence: GCCTCCCAAAGT

Best Matches for Motif ID 40 (Highest to Lowest)

Dataset #: 1
Motif ID: 144
Motif name: Motif 144
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 12
Similarity score: 0.0448889

Alignment:
GGGCTCCCACAGTGCAGCGG
-GCCTCCCAAAGT-------

Original motif     Consensus sequence: CCGCTGCACTGTGGGAGCCC Reverse complement motif     Consensus sequence: GGGCTCCCACAGTGCAGCGG


Dataset #: 1
Motif ID: 239
Motif name: Motif 239
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 12
Similarity score: 0.0724344

Alignment:
ACAGTTCTGGAGGCT
--ACTTTGGGAGGC-

Original motif     Consensus sequence: AGCCTCCAGAACTGT Reverse complement motif     Consensus sequence: ACAGTTCTGGAGGCT


Dataset #: 1 Motif ID: 41 Motif name: Motif 41

Original motif     Consensus sequence: AAAYAAAAAAA Reverse complement motif     Consensus sequence: TTTTTTTMTTT

Best Matches for Motif ID 41 (Highest to Lowest)

Dataset #: 1
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0197219

Alignment:
GTCTCWAMAAAAAAWAMAAA
---------AAAYAAAAAAA

Original motif     Consensus sequence: GTCTCWAMAAAAAAWAMAAA Reverse complement motif     Consensus sequence: TTTYTWTTTTTTYTWGAGAC


Dataset #: 1
Motif ID: 54
Motif name: Motif 54
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0476983

Alignment:
TTTCTTTTCCTT
-TTTTTTTMTTT

Original motif     Consensus sequence: AAGGAAAAGAAA Reverse complement motif     Consensus sequence: TTTCTTTTCCTT


Dataset #: 1 Motif ID: 42 Motif name: Motif 42

Original motif     Consensus sequence: CTCTGCCCGGCCGC Reverse complement motif     Consensus sequence: GCGGCCGGGCAGAG

Best Matches for Motif ID 42 (Highest to Lowest)

Dataset #: 1
Motif ID: 149
Motif name: Motif 149
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 14
Similarity score: 0.0584472

Alignment:
GGGTGCAGGMGGGCTGAGT
----GCGGCCGGGCAGAG-

Original motif     Consensus sequence: ACTCAGCCCRCCTGCACCC Reverse complement motif     Consensus sequence: GGGTGCAGGMGGGCTGAGT


Dataset #: 1
Motif ID: 307
Motif name: Motif 307
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 14
Similarity score: 0.0775689

Alignment:
AGAGCTCTGGCTGGCATCT
----CTCTGCCCGGCCGC-

Original motif     Consensus sequence: AGATGCCAGCCAGAGCTCT Reverse complement motif     Consensus sequence: AGAGCTCTGGCTGGCATCT


Dataset #: 1 Motif ID: 43 Motif name: Motif 43

Original motif     Consensus sequence: GCCAGGCAGAGRGKCTCCT Reverse complement motif     Consensus sequence: AGGAGRCMCTCTGCCTGGC

Best Matches for Motif ID 43 (Highest to Lowest)

Dataset #: 1
Motif ID: 30
Motif name: Motif 30
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 19
Similarity score: 0.049578

Alignment:
GCCGGGRAGAGGCGCTCCT
GCCAGGCAGAGRGKCTCCT

Original motif     Consensus sequence: AGGAGCGCCTCTKCCCGGC Reverse complement motif     Consensus sequence: GCCGGGRAGAGGCGCTCCT


Dataset #: 1
Motif ID: 10
Motif name: Motif 10
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 19
Similarity score: 0.0674635

Alignment:
AGGASCSTCYSWGCCMGGY
AGGAGRCMCTCTGCCTGGC

Original motif     Consensus sequence: AGGASCSTCYSWGCCMGGY Reverse complement motif     Consensus sequence: MCCYGGCWSMGASGSTCCT


Dataset #: 1 Motif ID: 44 Motif name: Motif 44

Original motif     Consensus sequence: AATCGCTTGAACC Reverse complement motif     Consensus sequence: GGTTCAAGCGATT

Best Matches for Motif ID 44 (Highest to Lowest)

Dataset #: 1
Motif ID: 16
Motif name: Motif 16
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 13
Similarity score: 0.0728317

Alignment:
GAAAGGGAACTCCCTGACCC
-------AATCGCTTGAACC

Original motif     Consensus sequence: GAAAGGGAACTCCCTGACCC Reverse complement motif     Consensus sequence: GGGTCAGGGAGTTCCCTTTC


Dataset #: 1
Motif ID: 178
Motif name: Motif 178
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 8
Number of overlap: 13
Similarity score: 0.0766097

Alignment:
ATGTGGAGGTGGAAGACAGT
-------GGTTCAAGCGATT

Original motif     Consensus sequence: ACTGTCTTCCACCTCCACAT Reverse complement motif     Consensus sequence: ATGTGGAGGTGGAAGACAGT


Dataset #: 1 Motif ID: 45 Motif name: Motif 45

Original motif     Consensus sequence: TGCCCAGTCTGGAAAGTG Reverse complement motif     Consensus sequence: CACTTTCCAGACTGGGCA

Best Matches for Motif ID 45 (Highest to Lowest)

Dataset #: 1
Motif ID: 27
Motif name: Motif 27
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 18
Similarity score: 0.0555298

Alignment:
CGCCCCGTCTGGGAAGTG
TGCCCAGTCTGGAAAGTG

Original motif     Consensus sequence: CACTTCCCAGACGGGGCG Reverse complement motif     Consensus sequence: CGCCCCGTCTGGGAAGTG


Dataset #: 1
Motif ID: 155
Motif name: Motif 155
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 18
Similarity score: 0.104002

Alignment:
TCCCTCCCGGACGGGGYGGC
CACTTTCCAGACTGGGCA--

Original motif     Consensus sequence: TCCCTCCCGGACGGGGYGGC Reverse complement motif     Consensus sequence: GCCKCCCCGTCCGGGAGGGA


Dataset #: 1 Motif ID: 46 Motif name: Motif 46

Original motif     Consensus sequence: CCCCWCCCCCA Reverse complement motif     Consensus sequence: TGGGGGWGGGG

Best Matches for Motif ID 46 (Highest to Lowest)

Dataset #: 1
Motif ID: 78
Motif name: Motif 78
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 11
Similarity score: 0.0694266

Alignment:
CGAGCCCTGCCCCGCGG
---CCCCWCCCCCA---

Original motif     Consensus sequence: CGAGCCCTGCCCCGCGG Reverse complement motif     Consensus sequence: CCGCGGGGCAGGGCTCG


Dataset #: 1
Motif ID: 221
Motif name: Motif 221
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 11
Similarity score: 0.0733808

Alignment:
GGGAGGAAGGGGACAC
-TGGGGGWGGGG----

Original motif     Consensus sequence: GGGAGGAAGGGGACAC Reverse complement motif     Consensus sequence: GTGTCCCCTTCCTCCC


Dataset #: 1 Motif ID: 47 Motif name: Motif 47

Original motif     Consensus sequence: GCCTCAGTTTCCY Reverse complement motif     Consensus sequence: MGGAAACTGAGGC

Best Matches for Motif ID 47 (Highest to Lowest)

Dataset #: 1
Motif ID: 26
Motif name: Motif 26
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 6
Number of overlap: 13
Similarity score: 0.0351242

Alignment:
CTCCTGCCTCAGCCTCCCRA
-----GCCTCAGTTTCCY--

Original motif     Consensus sequence: CTCCTGCCTCAGCCTCCCRA Reverse complement motif     Consensus sequence: TMGGGAGGCTGAGGCAGGAG


Dataset #: 1
Motif ID: 64
Motif name: Motif 64
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 6
Number of overlap: 13
Similarity score: 0.0624672

Alignment:
KCCGGGCCTTAGCTGCCTTC
-----GCCTCAGTTTCCY--

Original motif     Consensus sequence: GAAGGCAGCTAAGGCCCGGY Reverse complement motif     Consensus sequence: KCCGGGCCTTAGCTGCCTTC


Dataset #: 1 Motif ID: 48 Motif name: Motif 48

Original motif     Consensus sequence: AGCTCCCAGCGTGAGCGACG Reverse complement motif     Consensus sequence: CGTCGCTCACGCTGGGAGCT

Best Matches for Motif ID 48 (Highest to Lowest)

Dataset #: 1
Motif ID: 176
Motif name: Motif 176
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.113918

Alignment:
AGGCCCCAGTGTSTGTTGTT
AGCTCCCAGCGTGAGCGACG

Original motif     Consensus sequence: AGGCCCCAGTGTSTGTTGTT Reverse complement motif     Consensus sequence: AACAACASACACTGGGGCCT


Dataset #: 1
Motif ID: 312
Motif name: Motif 312
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.121076

Alignment:
CCCMKGGCACCCTCAGTCCT
CGTCGCTCACGCTGGGAGCT

Original motif     Consensus sequence: AGGACTGAGGGTGCCYRGGG Reverse complement motif     Consensus sequence: CCCMKGGCACCCTCAGTCCT


Dataset #: 1 Motif ID: 49 Motif name: Motif 49

Original motif     Consensus sequence: ACATCTGYMMCC Reverse complement motif     Consensus sequence: GGRRMCAGATGT

Best Matches for Motif ID 49 (Highest to Lowest)

Dataset #: 1
Motif ID: 1
Motif name: Motif 1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.0495311

Alignment:
GGGGTGACAGABGB
GGRRMCAGATGT--

Original motif     Consensus sequence: GGGGTGACAGABGB Reverse complement motif     Consensus sequence: BCVTCTGTCACCCC


Dataset #: 1
Motif ID: 199
Motif name: Motif 199
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.0505389

Alignment:
ACAGCTGGCACC
ACATCTGYMMCC

Original motif     Consensus sequence: ACAGCTGGCACC Reverse complement motif     Consensus sequence: GGTGCCAGCTGT


Dataset #: 1 Motif ID: 50 Motif name: Motif 50

Original motif     Consensus sequence: GATGTGAGGGC Reverse complement motif     Consensus sequence: GCCCTCACATC

Best Matches for Motif ID 50 (Highest to Lowest)

Dataset #: 1
Motif ID: 277
Motif name: Motif 277
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 11
Similarity score: 0.0679708

Alignment:
GCTTCTGGTGAGGGC
----GATGTGAGGGC

Original motif     Consensus sequence: GCCCTCACCAGAAGC Reverse complement motif     Consensus sequence: GCTTCTGGTGAGGGC


Dataset #: 1
Motif ID: 283
Motif name: Motif 283
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 11
Similarity score: 0.0702987

Alignment:
GGATGGTGAGGGC
--GATGTGAGGGC

Original motif     Consensus sequence: GCCCTCACCATCC Reverse complement motif     Consensus sequence: GGATGGTGAGGGC


Dataset #: 1 Motif ID: 51 Motif name: Motif 51

Original motif     Consensus sequence: GTGGGTGCGCGCA Reverse complement motif     Consensus sequence: TGCGCGCACCCAC

Best Matches for Motif ID 51 (Highest to Lowest)

Dataset #: 1
Motif ID: 17
Motif name: Motif 17
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 6
Number of overlap: 13
Similarity score: 0.0746013

Alignment:
TGHCCTGCKCCCACTGTCT
-----TGCGCGCACCCAC-

Original motif     Consensus sequence: AGACAGTGGGYGCAGGHCA Reverse complement motif     Consensus sequence: TGHCCTGCKCCCACTGTCT


Dataset #: 1
Motif ID: 159
Motif name: Motif 159
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 6
Number of overlap: 13
Similarity score: 0.0830854

Alignment:
ACAGGCTTTGTGTGAGCA
-----GTGGGTGCGCGCA

Original motif     Consensus sequence: ACAGGCTTTGTGTGAGCA Reverse complement motif     Consensus sequence: TGCTCACACAAAGCCTGT


Dataset #: 1 Motif ID: 52 Motif name: Motif 52

Original motif     Consensus sequence: GACTGGCAGGCAGCTCCACC Reverse complement motif     Consensus sequence: GGTGGAGCTGCCTGCCAGTC

Best Matches for Motif ID 52 (Highest to Lowest)

Dataset #: 1
Motif ID: 350
Motif name: Motif 350
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.108621

Alignment:
TGCTGGAGGTCCACTCCAGA
GACTGGCAGGCAGCTCCACC

Original motif     Consensus sequence: TCTGGAGTGGACCTCCAGCA Reverse complement motif     Consensus sequence: TGCTGGAGGTCCACTCCAGA


Dataset #: 1
Motif ID: 105
Motif name: Motif 105
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.118973

Alignment:
GGAGGTGTGGAGGGAGAGGC
GGTGGAGCTGCCTGCCAGTC

Original motif     Consensus sequence: GCCTCTCCCTCCACACCTCC Reverse complement motif     Consensus sequence: GGAGGTGTGGAGGGAGAGGC


Dataset #: 1 Motif ID: 53 Motif name: Motif 53

Original motif     Consensus sequence: GTCCCATCGACCACCCAAG Reverse complement motif     Consensus sequence: CTTGGGTGGTCGATGGGAC

Best Matches for Motif ID 53 (Highest to Lowest)

Dataset #: 1
Motif ID: 309
Motif name: Motif 309
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 0.113725

Alignment:
CATTCTGGGGTCTGGAGGAY
-CTTGGGTGGTCGATGGGAC

Original motif     Consensus sequence: CATTCTGGGGTCTGGAGGAY Reverse complement motif     Consensus sequence: MTCCTCCAGACCCCAGAATG


Dataset #: 1
Motif ID: 178
Motif name: Motif 178
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 19
Similarity score: 0.118023

Alignment:
ATGTGGAGGTGGAAGACAGT
CTTGGGTGGTCGATGGGAC-

Original motif     Consensus sequence: ACTGTCTTCCACCTCCACAT Reverse complement motif     Consensus sequence: ATGTGGAGGTGGAAGACAGT


Dataset #: 1 Motif ID: 54 Motif name: Motif 54

Original motif     Consensus sequence: AAGGAAAAGAAA Reverse complement motif     Consensus sequence: TTTCTTTTCCTT

Best Matches for Motif ID 54 (Highest to Lowest)

Dataset #: 1
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 9
Number of overlap: 12
Similarity score: 0.0346455

Alignment:
GTCTCWAMAAAAAAWAMAAA
--------AAGGAAAAGAAA

Original motif     Consensus sequence: GTCTCWAMAAAAAAWAMAAA Reverse complement motif     Consensus sequence: TTTYTWTTTTTTYTWGAGAC


Dataset #: 1
Motif ID: 356
Motif name: Motif 356
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.0458962

Alignment:
CAGTCTGTGTCTTTTAATT
-------TTTCTTTTCCTT

Original motif     Consensus sequence: AATTAAAAGACACAGACTG Reverse complement motif     Consensus sequence: CAGTCTGTGTCTTTTAATT


Dataset #: 1 Motif ID: 55 Motif name: Motif 55

Original motif     Consensus sequence: ATGGAATAYTATTCAGCCAT Reverse complement motif     Consensus sequence: ATGGCTGAATAKTATTCCAT

Best Matches for Motif ID 55 (Highest to Lowest)

Dataset #: 1
Motif ID: 234
Motif name: Motif 234
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.0832183

Alignment:
GTGTCKGGAGTTTGTTCCTT
ATGGCTGAATAKTATTCCAT

Original motif     Consensus sequence: AAGGAACAAACTCCRGACAC Reverse complement motif     Consensus sequence: GTGTCKGGAGTTTGTTCCTT


Dataset #: 1
Motif ID: 336
Motif name: Motif 336
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.102251

Alignment:
CAGGTGGTKTTTGGTTACAT
ATGGCTGAATAKTATTCCAT

Original motif     Consensus sequence: ATGTAACCAAAYACCACCTG Reverse complement motif     Consensus sequence: CAGGTGGTKTTTGGTTACAT


Dataset #: 1 Motif ID: 56 Motif name: Motif 56

Original motif     Consensus sequence: CRTGAGCCACYGYRCCYGGC Reverse complement motif     Consensus sequence: GCCKGGMKCMGTGGCTCAKG

Best Matches for Motif ID 56 (Highest to Lowest)

Dataset #: 1
Motif ID: 177
Motif name: Motif 177
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.0865863

Alignment:
CCCGAAGCTGCRYRCTCGGT
CRTGAGCCACYGYRCCYGGC

Original motif     Consensus sequence: CCCGAAGCTGCRYRCTCGGT Reverse complement motif     Consensus sequence: ACCGAGMKMGCAGCTTCGGG


Dataset #: 1
Motif ID: 112
Motif name: Motif 112
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.103187

Alignment:
CTTGCCCAAGGTCACACAGC
CRTGAGCCACYGYRCCYGGC

Original motif     Consensus sequence: GCTGTGTGACCTTGGGCAAG Reverse complement motif     Consensus sequence: CTTGCCCAAGGTCACACAGC


Dataset #: 1 Motif ID: 57 Motif name: Motif 57

Original motif     Consensus sequence: AAATATTTATT Reverse complement motif     Consensus sequence: AATAAATATTT

Best Matches for Motif ID 57 (Highest to Lowest)

Dataset #: 1
Motif ID: 55
Motif name: Motif 55
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 11
Similarity score: 0.0640425

Alignment:
ATGGCTGAATAKTATTCCAT
---AATAAATATTT------

Original motif     Consensus sequence: ATGGAATAYTATTCAGCCAT Reverse complement motif     Consensus sequence: ATGGCTGAATAKTATTCCAT


Dataset #: 1
Motif ID: 70
Motif name: Motif 70
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 11
Similarity score: 0.0653502

Alignment:
GCAGCAMTATTCACAATAG
----AAATATTTATT----

Original motif     Consensus sequence: CTATTGTGAATARTGCTGC Reverse complement motif     Consensus sequence: GCAGCAMTATTCACAATAG


Dataset #: 1 Motif ID: 58 Motif name: Motif 58

Original motif     Consensus sequence: ATGGACAYTTRGGTTGHTTC Reverse complement motif     Consensus sequence: GAAHCAACCKAAKTGTCCAT

Best Matches for Motif ID 58 (Highest to Lowest)

Dataset #: 1
Motif ID: 170
Motif name: Motif 170
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 0.0796786

Alignment:
ATTGATMKCCAGGGTTGATT-
-ATGGACAYTTRGGTTGHTTC

Original motif     Consensus sequence: AATCAACCCTGGYRATCAAT Reverse complement motif     Consensus sequence: ATTGATMKCCAGGGTTGATT


Dataset #: 1
Motif ID: 63
Motif name: Motif 63
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 0.0861321

Alignment:
AGTGAGAACATRYRRTRTTT-
-ATGGACAYTTRGGTTGHTTC

Original motif     Consensus sequence: AGTGAGAACATRYRRTRTTT Reverse complement motif     Consensus sequence: AAAMAMMKMATGTTCTCACT


Dataset #: 1 Motif ID: 59 Motif name: Motif 59

Original motif     Consensus sequence: CCTCCCSGACGRG Reverse complement motif     Consensus sequence: CKCGTCSGGGAGG

Best Matches for Motif ID 59 (Highest to Lowest)

Dataset #: 1
Motif ID: 155
Motif name: Motif 155
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 13
Similarity score: 0.0335165

Alignment:
TCCCTCCCGGACGGGGYGGC
--CCTCCCSGACGRG-----

Original motif     Consensus sequence: TCCCTCCCGGACGGGGYGGC Reverse complement motif     Consensus sequence: GCCKCCCCGTCCGGGAGGGA


Dataset #: 1
Motif ID: 108
Motif name: Motif 108
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 13
Similarity score: 0.0365108

Alignment:
GCGCTCKTCGGGGAGGCTCG
---CKCGTCSGGGAGG----

Original motif     Consensus sequence: CGAGCCTCCCCGAYGAGCGC Reverse complement motif     Consensus sequence: GCGCTCKTCGGGGAGGCTCG


Dataset #: 1 Motif ID: 60 Motif name: Motif 60

Original motif     Consensus sequence: GATCACGAGGTCAGGAG Reverse complement motif     Consensus sequence: CTCCTGACCTCGTGATC

Best Matches for Motif ID 60 (Highest to Lowest)

Dataset #: 1
Motif ID: 309
Motif name: Motif 309
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 17
Similarity score: 0.08025

Alignment:
CATTCTGGGGTCTGGAGGAY
GATCACGAGGTCAGGAG---

Original motif     Consensus sequence: CATTCTGGGGTCTGGAGGAY Reverse complement motif     Consensus sequence: MTCCTCCAGACCCCAGAATG


Dataset #: 1
Motif ID: 290
Motif name: Motif 290
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 17
Similarity score: 0.0894593

Alignment:
CTGTTTGCCTGGGTATCA
CTCCTGACCTCGTGATC-

Original motif     Consensus sequence: TGATACCCAGGCAAACAG Reverse complement motif     Consensus sequence: CTGTTTGCCTGGGTATCA


Dataset #: 1 Motif ID: 61 Motif name: Motif 61

Original motif     Consensus sequence: GGATCCACTGGGTGAAGCCA Reverse complement motif     Consensus sequence: TGGCTTCACCCAGTGGATCC

Best Matches for Motif ID 61 (Highest to Lowest)

Dataset #: 1
Motif ID: 84
Motif name: Motif 84
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.110456

Alignment:
GGCACTGCTGGGGGACCCAG
GGATCCACTGGGTGAAGCCA

Original motif     Consensus sequence: CTGGGTCCCCCAGCAGTGCC Reverse complement motif     Consensus sequence: GGCACTGCTGGGGGACCCAG


Dataset #: 1
Motif ID: 202
Motif name: Motif 202
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.116364

Alignment:
ACACATCACAAAGCAGTTTC
TGGCTTCACCCAGTGGATCC

Original motif     Consensus sequence: ACACATCACAAAGCAGTTTC Reverse complement motif     Consensus sequence: GAAACTGCTTTGTGATGTGT


Dataset #: 1 Motif ID: 62 Motif name: Motif 62

Original motif     Consensus sequence: AGGAACAGCTCCRGTCTAC Reverse complement motif     Consensus sequence: GTAGACKGGAGCTGTTCCT

Best Matches for Motif ID 62 (Highest to Lowest)

Dataset #: 1
Motif ID: 30
Motif name: Motif 30
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 19
Similarity score: 0.108892

Alignment:
AGGAGCGCCTCTKCCCGGC
AGGAACAGCTCCRGTCTAC

Original motif     Consensus sequence: AGGAGCGCCTCTKCCCGGC Reverse complement motif     Consensus sequence: GCCGGGRAGAGGCGCTCCT


Dataset #: 1
Motif ID: 234
Motif name: Motif 234
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 0.110299

Alignment:
AAGGAACAAACTCCRGACAC
-AGGAACAGCTCCRGTCTAC

Original motif     Consensus sequence: AAGGAACAAACTCCRGACAC Reverse complement motif     Consensus sequence: GTGTCKGGAGTTTGTTCCTT


Dataset #: 1 Motif ID: 63 Motif name: Motif 63

Original motif     Consensus sequence: AGTGAGAACATRYRRTRTTT Reverse complement motif     Consensus sequence: AAAMAMMKMATGTTCTCACT

Best Matches for Motif ID 63 (Highest to Lowest)

Dataset #: 1
Motif ID: 170
Motif name: Motif 170
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.10502

Alignment:
AATCAACCCTGGYRATCAAT
AAAMAMMKMATGTTCTCACT

Original motif     Consensus sequence: AATCAACCCTGGYRATCAAT Reverse complement motif     Consensus sequence: ATTGATMKCCAGGGTTGATT


Dataset #: 1
Motif ID: 99
Motif name: Motif 99
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.106569

Alignment:
GCAAAKGACATGATYTCATT
AAAMAMMKMATGTTCTCACT

Original motif     Consensus sequence: GCAAAKGACATGATYTCATT Reverse complement motif     Consensus sequence: AATGAKATCATGTCYTTTGC


Dataset #: 1 Motif ID: 64 Motif name: Motif 64

Original motif     Consensus sequence: GAAGGCAGCTAAGGCCCGGY Reverse complement motif     Consensus sequence: KCCGGGCCTTAGCTGCCTTC

Best Matches for Motif ID 64 (Highest to Lowest)

Dataset #: 1
Motif ID: 100
Motif name: Motif 100
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.088142

Alignment:
CGCGGCGCTTGCGGGCCAGC
KCCGGGCCTTAGCTGCCTTC

Original motif     Consensus sequence: GCTGGCCCGCAAGCGCCGCG Reverse complement motif     Consensus sequence: CGCGGCGCTTGCGGGCCAGC


Dataset #: 1
Motif ID: 13
Motif name: Motif 13
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 19
Similarity score: 0.586666

Alignment:
-AAGCAGGGCGAGGCATTGCC
GAAGGCAGCTAAGGCCCGGY-

Original motif     Consensus sequence: AAGCAGGGCGAGGCATTGCC Reverse complement motif     Consensus sequence: GGCAATGCCTCGCCCTGCTT


Dataset #: 1 Motif ID: 65 Motif name: Motif 65

Original motif     Consensus sequence: AGAAATCGAGCRCAGCGCCG Reverse complement motif     Consensus sequence: CGGCGCTGMGCTCGATTTCT

Best Matches for Motif ID 65 (Highest to Lowest)

Dataset #: 1
Motif ID: 17
Motif name: Motif 17
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 19
Similarity score: 0.0924478

Alignment:
-TGHCCTGCKCCCACTGTCT
CGGCGCTGMGCTCGATTTCT

Original motif     Consensus sequence: AGACAGTGGGYGCAGGHCA Reverse complement motif     Consensus sequence: TGHCCTGCKCCCACTGTCT


Dataset #: 1
Motif ID: 16
Motif name: Motif 16
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 0.116136

Alignment:
GGGTCAGGGAGTTCCCTTTC-
-CGGCGCTGMGCTCGATTTCT

Original motif     Consensus sequence: GAAAGGGAACTCCCTGACCC Reverse complement motif     Consensus sequence: GGGTCAGGGAGTTCCCTTTC


Dataset #: 1 Motif ID: 66 Motif name: Motif 66

Original motif     Consensus sequence: ACACACAYACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTKTGTGTGT

Best Matches for Motif ID 66 (Highest to Lowest)

Dataset #: 1
Motif ID: 145
Motif name: Motif 145
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 19
Similarity score: 0.0762936

Alignment:
TYTGTCMTTTTGTGACTGGC
TGTGTGTGTGTKTGTGTGT-

Original motif     Consensus sequence: GCCAGTCACAAAARGACAMA Reverse complement motif     Consensus sequence: TYTGTCMTTTTGTGACTGGC


Dataset #: 1
Motif ID: 109
Motif name: Motif 109
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 19
Similarity score: 0.084962

Alignment:
GAGAGAGAGAGAGAGAGAGA
-ACACACAYACACACACACA

Original motif     Consensus sequence: GAGAGAGAGAGAGAGAGAGA Reverse complement motif     Consensus sequence: TCTCTCTCTCTCTCTCTCTC


Dataset #: 1 Motif ID: 67 Motif name: Motif 67

Original motif     Consensus sequence: CTGGGCTCCTGAGTCTGGTG Reverse complement motif     Consensus sequence: CACCAGACTCAGGAGCCCAG

Best Matches for Motif ID 67 (Highest to Lowest)

Dataset #: 1
Motif ID: 26
Motif name: Motif 26
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.10051

Alignment:
TMGGGAGGCTGAGGCAGGAG
CTGGGCTCCTGAGTCTGGTG

Original motif     Consensus sequence: CTCCTGCCTCAGCCTCCCRA Reverse complement motif     Consensus sequence: TMGGGAGGCTGAGGCAGGAG


Dataset #: 1
Motif ID: 29
Motif name: Motif 29
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.107414

Alignment:
CTGGGCRACAGAGYRAGACY
CTGGGCTCCTGAGTCTGGTG

Original motif     Consensus sequence: CTGGGCRACAGAGYRAGACY Reverse complement motif     Consensus sequence: MGTCTMKCTCTGTKGCCCAG


Dataset #: 1 Motif ID: 68 Motif name: Motif 68

Original motif     Consensus sequence: CATGGCGGGCTGCAGGTC Reverse complement motif     Consensus sequence: GACCTGCAGCCCGCCATG

Best Matches for Motif ID 68 (Highest to Lowest)

Dataset #: 1
Motif ID: 52
Motif name: Motif 52
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 18
Similarity score: 0.102941

Alignment:
GACTGGCAGGCAGCTCCACC
-CATGGCGGGCTGCAGGTC-

Original motif     Consensus sequence: GACTGGCAGGCAGCTCCACC Reverse complement motif     Consensus sequence: GGTGGAGCTGCCTGCCAGTC


Dataset #: 1
Motif ID: 164
Motif name: Motif 164
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 18
Similarity score: 0.111785

Alignment:
AGCCCCGGTTCCCGCYCGC
-GACCTGCAGCCCGCCATG

Original motif     Consensus sequence: AGCCCCGGTTCCCGCYCGC Reverse complement motif     Consensus sequence: GCGMGCGGGAACCGGGGCT


Dataset #: 1 Motif ID: 69 Motif name: Motif 69

Original motif     Consensus sequence: GTAGCTGGGAYTACA Reverse complement motif     Consensus sequence: TGTAKTCCCAGCTAC

Best Matches for Motif ID 69 (Highest to Lowest)

Dataset #: 1
Motif ID: 102
Motif name: Motif 102
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 5
Number of overlap: 15
Similarity score: 0.0936422

Alignment:
GTTGTGAGGATTAAATGAG
GTAGCTGGGAYTACA----

Original motif     Consensus sequence: CTCATTTAATCCTCACAAC Reverse complement motif     Consensus sequence: GTTGTGAGGATTAAATGAG


Dataset #: 1
Motif ID: 106
Motif name: Motif 106
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 6
Number of overlap: 15
Similarity score: 0.0994445

Alignment:
ATTGGTGTATTTACAATCCC
GTAGCTGGGAYTACA-----

Original motif     Consensus sequence: ATTGGTGTATTTACAATCCC Reverse complement motif     Consensus sequence: GGGATTGTAAATACACCAAT


Dataset #: 1 Motif ID: 70 Motif name: Motif 70

Original motif     Consensus sequence: CTATTGTGAATARTGCTGC Reverse complement motif     Consensus sequence: GCAGCAMTATTCACAATAG

Best Matches for Motif ID 70 (Highest to Lowest)

Dataset #: 1
Motif ID: 191
Motif name: Motif 191
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 19
Similarity score: 0.0948966

Alignment:
GCTGCARTCTCGGCACTTT
GCAGCAMTATTCACAATAG

Original motif     Consensus sequence: AAAGTGCCGAGAKTGCAGC Reverse complement motif     Consensus sequence: GCTGCARTCTCGGCACTTT


Dataset #: 1
Motif ID: 106
Motif name: Motif 106
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 19
Similarity score: 0.100944

Alignment:
GGGATTGTAAATACACCAAT
-CTATTGTGAATARTGCTGC

Original motif     Consensus sequence: ATTGGTGTATTTACAATCCC Reverse complement motif     Consensus sequence: GGGATTGTAAATACACCAAT


Dataset #: 1 Motif ID: 71 Motif name: Motif 71

Original motif     Consensus sequence: AGCACTTTG Reverse complement motif     Consensus sequence: CAAAGTGCT

Best Matches for Motif ID 71 (Highest to Lowest)

Dataset #: 1
Motif ID: 304
Motif name: Motif 304
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 9
Similarity score: 0.039262

Alignment:
AGCAGYTTGGAAACACT
AGCACTTTG--------

Original motif     Consensus sequence: AGTGTTTCCAAMCTGCT Reverse complement motif     Consensus sequence: AGCAGYTTGGAAACACT


Dataset #: 1
Motif ID: 134
Motif name: Motif 134
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 9
Similarity score: 0.0420544

Alignment:
CAAACTGCA
CAAAGTGCT

Original motif     Consensus sequence: CAAACTGCA Reverse complement motif     Consensus sequence: TGCAGTTTG


Dataset #: 1 Motif ID: 72 Motif name: Motif 72

Original motif     Consensus sequence: CGCACTCCTCAGCC Reverse complement motif     Consensus sequence: GGCTGAGGAGTGCG

Best Matches for Motif ID 72 (Highest to Lowest)

Dataset #: 1
Motif ID: 89
Motif name: Motif 89
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0631515

Alignment:
TACACCCTCCGCAGCC
--CGCACTCCTCAGCC

Original motif     Consensus sequence: GGCTGCGGAGGGTGTA Reverse complement motif     Consensus sequence: TACACCCTCCGCAGCC


Dataset #: 1
Motif ID: 26
Motif name: Motif 26
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0793425

Alignment:
CTCCTGCCTCAGCCTCCCRA
CGCACTCCTCAGCC------

Original motif     Consensus sequence: CTCCTGCCTCAGCCTCCCRA Reverse complement motif     Consensus sequence: TMGGGAGGCTGAGGCAGGAG


Dataset #: 1 Motif ID: 73 Motif name: Motif 73

Original motif     Consensus sequence: CAAACTGCAAG Reverse complement motif     Consensus sequence: CTTGCAGTTTG

Best Matches for Motif ID 73 (Highest to Lowest)

Dataset #: 1
Motif ID: 292
Motif name: Motif 292
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 11
Similarity score: 0.0679381

Alignment:
TTGTCCCACTGGAAGGTCTT
----CAAACTGCAAG-----

Original motif     Consensus sequence: AAGACCTTCCAGTGGGACAA Reverse complement motif     Consensus sequence: TTGTCCCACTGGAAGGTCTT


Dataset #: 1
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.0730245

Alignment:
GAGSTTGCAGTGAGC
---CTTGCAGTTTG-

Original motif     Consensus sequence: GCTCACTGCAASCTC Reverse complement motif     Consensus sequence: GAGSTTGCAGTGAGC


Dataset #: 1 Motif ID: 74 Motif name: Motif 74

Original motif     Consensus sequence: CACTTCCTAGATGG Reverse complement motif     Consensus sequence: CCATCTAGGAAGTG

Best Matches for Motif ID 74 (Highest to Lowest)

Dataset #: 1
Motif ID: 27
Motif name: Motif 27
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0286091

Alignment:
CACTTCCCAGACGGGGCG
CACTTCCTAGATGG----

Original motif     Consensus sequence: CACTTCCCAGACGGGGCG Reverse complement motif     Consensus sequence: CGCCCCGTCTGGGAAGTG


Dataset #: 1
Motif ID: 95
Motif name: Motif 95
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0523125

Alignment:
ACCCYGTCTGGGAGGTG
---CCATCTAGGAAGTG

Original motif     Consensus sequence: ACCCYGTCTGGGAGGTG Reverse complement motif     Consensus sequence: CACCTCCCAGACMGGGT


Dataset #: 1 Motif ID: 75 Motif name: Motif 75

Original motif     Consensus sequence: CATGGAGCGGKK Reverse complement motif     Consensus sequence: RRCCGCTCCATG

Best Matches for Motif ID 75 (Highest to Lowest)

Dataset #: 1
Motif ID: 331
Motif name: Motif 331
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 12
Similarity score: 0.0720918

Alignment:
GCCTCCTTGAGCTGTGGTGG
----CATGGAGCGGKK----

Original motif     Consensus sequence: CCACCACAGCTCAAGGAGGC Reverse complement motif     Consensus sequence: GCCTCCTTGAGCTGTGGTGG


Dataset #: 1
Motif ID: 56
Motif name: Motif 56
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 12
Similarity score: 0.0764369

Alignment:
CRTGAGCCACYGYRCCYGGC
-RRCCGCTCCATG-------

Original motif     Consensus sequence: CRTGAGCCACYGYRCCYGGC Reverse complement motif     Consensus sequence: GCCKGGMKCMGTGGCTCAKG


Dataset #: 1 Motif ID: 76 Motif name: Motif 76

Original motif     Consensus sequence: GTGCCAGGCACTGTKCTARG Reverse complement motif     Consensus sequence: CMTAGYACAGTGCCTGGCAC

Best Matches for Motif ID 76 (Highest to Lowest)

Dataset #: 1
Motif ID: 56
Motif name: Motif 56
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 19
Similarity score: 0.0709271

Alignment:
-CRTGAGCCACYGYRCCYGGC
GTGCCAGGCACTGTKCTARG-

Original motif     Consensus sequence: CRTGAGCCACYGYRCCYGGC Reverse complement motif     Consensus sequence: GCCKGGMKCMGTGGCTCAKG


Dataset #: 1
Motif ID: 112
Motif name: Motif 112
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 0.0806209

Alignment:
GCTGTGTGACCTTGGGCAAG-
-GTGCCAGGCACTGTKCTARG

Original motif     Consensus sequence: GCTGTGTGACCTTGGGCAAG Reverse complement motif     Consensus sequence: CTTGCCCAAGGTCACACAGC


Dataset #: 1 Motif ID: 77 Motif name: Motif 77

Original motif     Consensus sequence: AGGAAGAAA Reverse complement motif     Consensus sequence: TTTCTTCCT

Best Matches for Motif ID 77 (Highest to Lowest)

Dataset #: 1
Motif ID: 173
Motif name: Motif 173
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 9
Similarity score: 0.0441796

Alignment:
TTGTTTCCTT
TTTCTTCCT-

Original motif     Consensus sequence: AAGGAAACAA Reverse complement motif     Consensus sequence: TTGTTTCCTT


Dataset #: 1
Motif ID: 234
Motif name: Motif 234
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 11
Number of overlap: 9
Similarity score: 0.0447051

Alignment:
AAGGAACAAACTCCRGACAC
-AGGAAGAAA----------

Original motif     Consensus sequence: AAGGAACAAACTCCRGACAC Reverse complement motif     Consensus sequence: GTGTCKGGAGTTTGTTCCTT


Dataset #: 1 Motif ID: 78 Motif name: Motif 78

Original motif     Consensus sequence: CGAGCCCTGCCCCGCGG Reverse complement motif     Consensus sequence: CCGCGGGGCAGGGCTCG

Best Matches for Motif ID 78 (Highest to Lowest)

Dataset #: 1
Motif ID: 96
Motif name: Motif 96
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 17
Similarity score: 0.0803184

Alignment:
AAGCTGAGGGAGCCGGCTCC
---CCGCGGGGCAGGGCTCG

Original motif     Consensus sequence: AAGCTGAGGGAGCCGGCTCC Reverse complement motif     Consensus sequence: GGAGCCGGCTCCCTCAGCTT


Dataset #: 1
Motif ID: 30
Motif name: Motif 30
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 17
Similarity score: 0.0851642

Alignment:
GCCGGGRAGAGGCGCTCCT
-CCGCGGGGCAGGGCTCG-

Original motif     Consensus sequence: AGGAGCGCCTCTKCCCGGC Reverse complement motif     Consensus sequence: GCCGGGRAGAGGCGCTCCT


Dataset #: 1 Motif ID: 79 Motif name: Motif 79

Original motif     Consensus sequence: AATGAATGAAT Reverse complement motif     Consensus sequence: ATTCATTCATT

Best Matches for Motif ID 79 (Highest to Lowest)

Dataset #: 1
Motif ID: 341
Motif name: Motif 341
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 11
Similarity score: 0.0536965

Alignment:
TGGATGGATGGATGGAT
--AATGAATGAAT----

Original motif     Consensus sequence: ATCCATCCATCCATCCA Reverse complement motif     Consensus sequence: TGGATGGATGGATGGAT


Dataset #: 1
Motif ID: 211
Motif name: Motif 211
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 11
Similarity score: 0.0549499

Alignment:
CGGCTTCATTCTTGAAGTC
---ATTCATTCATT-----

Original motif     Consensus sequence: GACTTCAAGAATGAAGCCG Reverse complement motif     Consensus sequence: CGGCTTCATTCTTGAAGTC


Dataset #: 1 Motif ID: 80 Motif name: Motif 80

Original motif     Consensus sequence: WTTTTWAAAAW Reverse complement motif     Consensus sequence: WTTTTWAAAAW

Best Matches for Motif ID 80 (Highest to Lowest)

Dataset #: 1
Motif ID: 319
Motif name: Motif 319
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 11
Similarity score: 0.0536456

Alignment:
TAGTTTTTAACAA
--WTTTTWAAAAW

Original motif     Consensus sequence: TAGTTTTTAACAA Reverse complement motif     Consensus sequence: TTGTTAAAAACTA


Dataset #: 1
Motif ID: 81
Motif name: Motif 81
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.0558466

Alignment:
ATTTTACAGATG
WTTTTWAAAAW-

Original motif     Consensus sequence: CATCTGTAAAAT Reverse complement motif     Consensus sequence: ATTTTACAGATG


Dataset #: 1 Motif ID: 81 Motif name: Motif 81

Original motif     Consensus sequence: CATCTGTAAAAT Reverse complement motif     Consensus sequence: ATTTTACAGATG

Best Matches for Motif ID 81 (Highest to Lowest)

Dataset #: 1
Motif ID: 233
Motif name: Motif 233
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 12
Similarity score: 0.0547757

Alignment:
GTTAACTGTAAAACAGCCT
--CATCTGTAAAAT-----

Original motif     Consensus sequence: GTTAACTGTAAAACAGCCT Reverse complement motif     Consensus sequence: AGGCTGTTTTACAGTTAAC


Dataset #: 1
Motif ID: 303
Motif name: Motif 303
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 12
Similarity score: 0.0658845

Alignment:
AGTTCTTAAAGATGGT
--ATTTTACAGATG--

Original motif     Consensus sequence: AGTTCTTAAAGATGGT Reverse complement motif     Consensus sequence: ACCATCTTTAAGAACT


Dataset #: 1 Motif ID: 82 Motif name: Motif 82

Original motif     Consensus sequence: GCTTAGCACCYGGGCCAGC Reverse complement motif     Consensus sequence: GCTGGCCCKGGTGCTAAGC

Best Matches for Motif ID 82 (Highest to Lowest)

Dataset #: 1
Motif ID: 100
Motif name: Motif 100
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 19
Similarity score: 0.0733424

Alignment:
CGCGGCGCTTGCGGGCCAGC
-GCTTAGCACCYGGGCCAGC

Original motif     Consensus sequence: GCTGGCCCGCAAGCGCCGCG Reverse complement motif     Consensus sequence: CGCGGCGCTTGCGGGCCAGC


Dataset #: 1
Motif ID: 56
Motif name: Motif 56
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 19
Similarity score: 0.104947

Alignment:
GCCKGGMKCMGTGGCTCAKG
-GCTGGCCCKGGTGCTAAGC

Original motif     Consensus sequence: CRTGAGCCACYGYRCCYGGC Reverse complement motif     Consensus sequence: GCCKGGMKCMGTGGCTCAKG


Dataset #: 1 Motif ID: 83 Motif name: Motif 83

Original motif     Consensus sequence: AAAATGTGGTAYATAYAYAC Reverse complement motif     Consensus sequence: GTKTMTATMTACCACATTTT

Best Matches for Motif ID 83 (Highest to Lowest)

Dataset #: 1
Motif ID: 86
Motif name: Motif 86
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.100064

Alignment:
AGTAGGTGCTCARTAAATRB
AAAATGTGGTAYATAYAYAC

Original motif     Consensus sequence: AGTAGGTGCTCARTAAATRB Reverse complement motif     Consensus sequence: VMATTTAKTGAGCACCTACT


Dataset #: 1
Motif ID: 308
Motif name: Motif 308
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.110604

Alignment:
GTTATTAATTGGCCTAATTT
GTKTMTATMTACCACATTTT

Original motif     Consensus sequence: AAATTAGGCCAATTAATAAC Reverse complement motif     Consensus sequence: GTTATTAATTGGCCTAATTT


Dataset #: 1 Motif ID: 84 Motif name: Motif 84

Original motif     Consensus sequence: CTGGGTCCCCCAGCAGTGCC Reverse complement motif     Consensus sequence: GGCACTGCTGGGGGACCCAG

Best Matches for Motif ID 84 (Highest to Lowest)

Dataset #: 1
Motif ID: 61
Motif name: Motif 61
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.106094

Alignment:
TGGCTTCACCCAGTGGATCC
CTGGGTCCCCCAGCAGTGCC

Original motif     Consensus sequence: GGATCCACTGGGTGAAGCCA Reverse complement motif     Consensus sequence: TGGCTTCACCCAGTGGATCC


Dataset #: 1
Motif ID: 29
Motif name: Motif 29
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.107291

Alignment:
CTGGGCRACAGAGYRAGACY
CTGGGTCCCCCAGCAGTGCC

Original motif     Consensus sequence: CTGGGCRACAGAGYRAGACY Reverse complement motif     Consensus sequence: MGTCTMKCTCTGTKGCCCAG


Dataset #: 1 Motif ID: 85 Motif name: Motif 85

Original motif     Consensus sequence: CTAGACATAAAGGTTCTCCA Reverse complement motif     Consensus sequence: TGGAGAACCTTTATGTCTAG

Best Matches for Motif ID 85 (Highest to Lowest)

Dataset #: 1
Motif ID: 145
Motif name: Motif 145
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 0.110512

Alignment:
GCCAGTCACAAAARGACAMA-
-CTAGACATAAAGGTTCTCCA

Original motif     Consensus sequence: GCCAGTCACAAAARGACAMA Reverse complement motif     Consensus sequence: TYTGTCMTTTTGTGACTGGC


Dataset #: 1
Motif ID: 260
Motif name: Motif 260
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 19
Similarity score: 0.114441

Alignment:
TTMGTCCCAGAGGGGCACC-
CTAGACATAAAGGTTCTCCA

Original motif     Consensus sequence: GGTGCCCCTCTGGGACRAA Reverse complement motif     Consensus sequence: TTMGTCCCAGAGGGGCACC


Dataset #: 1 Motif ID: 86 Motif name: Motif 86

Original motif     Consensus sequence: AGTAGGTGCTCARTAAATRB Reverse complement motif     Consensus sequence: VMATTTAKTGAGCACCTACT

Best Matches for Motif ID 86 (Highest to Lowest)

Dataset #: 1
Motif ID: 83
Motif name: Motif 83
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.0711295

Alignment:
AAAATGTGGTAYATAYAYAC
AGTAGGTGCTCARTAAATRB

Original motif     Consensus sequence: AAAATGTGGTAYATAYAYAC Reverse complement motif     Consensus sequence: GTKTMTATMTACCACATTTT


Dataset #: 1
Motif ID: 357
Motif name: Motif 357
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 0.581344

Alignment:
TAATTTTATGTGTCAACTTG-
-VMATTTAKTGAGCACCTACT

Original motif     Consensus sequence: CAAGTTGACACATAAAATTA Reverse complement motif     Consensus sequence: TAATTTTATGTGTCAACTTG


Dataset #: 1 Motif ID: 87 Motif name: Motif 87

Original motif     Consensus sequence: CATGTGTGTCC Reverse complement motif     Consensus sequence: GGACACACATG

Best Matches for Motif ID 87 (Highest to Lowest)

Dataset #: 1
Motif ID: 206
Motif name: Motif 206
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 11
Similarity score: 0.0574969

Alignment:
GCTCCWGTGYGKCC
---CATGTGTGTCC

Original motif     Consensus sequence: GCTCCWGTGYGKCC Reverse complement motif     Consensus sequence: GGRCKCACWGGAGC


Dataset #: 1
Motif ID: 120
Motif name: Motif 120
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.062082

Alignment:
CCATGTGSTCCC
-CATGTGTGTCC

Original motif     Consensus sequence: CCATGTGSTCCC Reverse complement motif     Consensus sequence: GGGASCACATGG


Dataset #: 1 Motif ID: 88 Motif name: Motif 88

Original motif     Consensus sequence: ACCGGGGCTGCA Reverse complement motif     Consensus sequence: TGCAGCCCCGGT

Best Matches for Motif ID 88 (Highest to Lowest)

Dataset #: 1
Motif ID: 62
Motif name: Motif 62
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 12
Similarity score: 0.0744827

Alignment:
GTAGACKGGAGCTGTTCCT
---ACCGGGGCTGCA----

Original motif     Consensus sequence: AGGAACAGCTCCRGTCTAC Reverse complement motif     Consensus sequence: GTAGACKGGAGCTGTTCCT


Dataset #: 1
Motif ID: 17
Motif name: Motif 17
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 12
Similarity score: 0.0782839

Alignment:
AGACAGTGGGYGCAGGHCA
--ACCGGGGCTGCA-----

Original motif     Consensus sequence: AGACAGTGGGYGCAGGHCA Reverse complement motif     Consensus sequence: TGHCCTGCKCCCACTGTCT


Dataset #: 1 Motif ID: 89 Motif name: Motif 89

Original motif     Consensus sequence: GGCTGCGGAGGGTGTA Reverse complement motif     Consensus sequence: TACACCCTCCGCAGCC

Best Matches for Motif ID 89 (Highest to Lowest)

Dataset #: 1
Motif ID: 105
Motif name: Motif 105
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 16
Similarity score: 0.0814615

Alignment:
GGAGGTGTGGAGGGAGAGGC
--GGCTGCGGAGGGTGTA--

Original motif     Consensus sequence: GCCTCTCCCTCCACACCTCC Reverse complement motif     Consensus sequence: GGAGGTGTGGAGGGAGAGGC


Dataset #: 1
Motif ID: 67
Motif name: Motif 67
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 16
Similarity score: 0.0835227

Alignment:
CACCAGACTCAGGAGCCCAG
-TACACCCTCCGCAGCC---

Original motif     Consensus sequence: CTGGGCTCCTGAGTCTGGTG Reverse complement motif     Consensus sequence: CACCAGACTCAGGAGCCCAG


Dataset #: 1 Motif ID: 90 Motif name: Motif 90

Original motif     Consensus sequence: CCCCATTGCY Reverse complement motif     Consensus sequence: KGCAATGGGG

Best Matches for Motif ID 90 (Highest to Lowest)

Dataset #: 1
Motif ID: 193
Motif name: Motif 193
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 9
Number of overlap: 10
Similarity score: 0.0254376

Alignment:
ATACAATGGGGGTACAGRC
-KGCAATGGGG--------

Original motif     Consensus sequence: ATACAATGGGGGTACAGRC Reverse complement motif     Consensus sequence: GKCTGTACCCCCATTGTAT


Dataset #: 1
Motif ID: 196
Motif name: Motif 196
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 9
Number of overlap: 10
Similarity score: 0.0348826

Alignment:
CCTGCCATTGCYSAGGCTTG
--CCCCATTGCY--------

Original motif     Consensus sequence: CCTGCCATTGCYSAGGCTTG Reverse complement motif     Consensus sequence: CAAGCCTSKGCAATGGCAGG


Dataset #: 1 Motif ID: 91 Motif name: Motif 91

Original motif     Consensus sequence: AGACYCYGTCTCAA Reverse complement motif     Consensus sequence: TTGAGACMGKGTCT

Best Matches for Motif ID 91 (Highest to Lowest)

Dataset #: 1
Motif ID: 175
Motif name: Motif 175
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 14
Similarity score: 0.0743241

Alignment:
GCACTCTGTMTCTAGCT
AGACYCYGTCTCAA---

Original motif     Consensus sequence: AGCTAGAYACAGAGTGC Reverse complement motif     Consensus sequence: GCACTCTGTMTCTAGCT


Dataset #: 1
Motif ID: 160
Motif name: Motif 160
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 14
Similarity score: 0.0811922

Alignment:
TACCTGAGACTGGGTAATTT
---TTGAGACMGKGTCT---

Original motif     Consensus sequence: AAATTACCCAGTCTCAGGTA Reverse complement motif     Consensus sequence: TACCTGAGACTGGGTAATTT


Dataset #: 1 Motif ID: 92 Motif name: Motif 92

Original motif     Consensus sequence: GGGGGCTGACCCCCCCACC Reverse complement motif     Consensus sequence: GGTGGGGGGGTCAGCCCCC

Best Matches for Motif ID 92 (Highest to Lowest)

Dataset #: 1
Motif ID: 52
Motif name: Motif 52
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 0.100201

Alignment:
GACTGGCAGGCAGCTCCACC
-GGGGGCTGACCCCCCCACC

Original motif     Consensus sequence: GACTGGCAGGCAGCTCCACC Reverse complement motif     Consensus sequence: GGTGGAGCTGCCTGCCAGTC


Dataset #: 1
Motif ID: 293
Motif name: Motif 293
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 19
Similarity score: 0.10109

Alignment:
CTGACTGGGAGACACCTCCC
-GGTGGGGGGGTCAGCCCCC

Original motif     Consensus sequence: CTGACTGGGAGACACCTCCC Reverse complement motif     Consensus sequence: GGGAGGTGTCTCCCAGTCAG


Dataset #: 1 Motif ID: 93 Motif name: Motif 93

Original motif     Consensus sequence: CCATGTGCGG Reverse complement motif     Consensus sequence: CCGCACATGG

Best Matches for Motif ID 93 (Highest to Lowest)

Dataset #: 1
Motif ID: 128
Motif name: Motif 128
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0496914

Alignment:
CMGCTCCGAGTGCGG
-----CCATGTGCGG

Original motif     Consensus sequence: CCGCACTCGGAGCRG Reverse complement motif     Consensus sequence: CMGCTCCGAGTGCGG


Dataset #: 1
Motif ID: 25
Motif name: Motif 25
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 6
Number of overlap: 10
Similarity score: 0.0540497

Alignment:
GTACCTCAGWTGGAAATG
---CCGCACATGG-----

Original motif     Consensus sequence: CATTTCCAWCTGAGGTAC Reverse complement motif     Consensus sequence: GTACCTCAGWTGGAAATG


Dataset #: 1 Motif ID: 94 Motif name: Motif 94

Original motif     Consensus sequence: TAAGTGGGAGCTAARC Reverse complement motif     Consensus sequence: GMTTAGCTCCCACTTA

Best Matches for Motif ID 94 (Highest to Lowest)

Dataset #: 1
Motif ID: 333
Motif name: Motif 333
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 16
Similarity score: 0.062587

Alignment:
TAGATAATAGCTCCAGCTTT
----GMTTAGCTCCCACTTA

Original motif     Consensus sequence: TAGATAATAGCTCCAGCTTT Reverse complement motif     Consensus sequence: AAAGCTGGAGCTATTATCTA


Dataset #: 1
Motif ID: 306
Motif name: Motif 306
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 16
Similarity score: 0.0700236

Alignment:
GACATGAGCTGGCGCTTG
--GMTTAGCTCCCACTTA

Original motif     Consensus sequence: GACATGAGCTGGCGCTTG Reverse complement motif     Consensus sequence: CAAGCGCCAGCTCATGTC


Dataset #: 1 Motif ID: 95 Motif name: Motif 95

Original motif     Consensus sequence: ACCCYGTCTGGGAGGTG Reverse complement motif     Consensus sequence: CACCTCCCAGACMGGGT

Best Matches for Motif ID 95 (Highest to Lowest)

Dataset #: 1
Motif ID: 27
Motif name: Motif 27
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 17
Similarity score: 0.0376618

Alignment:
CACTTCCCAGACGGGGCG
-CACCTCCCAGACMGGGT

Original motif     Consensus sequence: CACTTCCCAGACGGGGCG Reverse complement motif     Consensus sequence: CGCCCCGTCTGGGAAGTG


Dataset #: 1
Motif ID: 45
Motif name: Motif 45
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 17
Similarity score: 0.0519023

Alignment:
TGCCCAGTCTGGAAAGTG
-ACCCYGTCTGGGAGGTG

Original motif     Consensus sequence: TGCCCAGTCTGGAAAGTG Reverse complement motif     Consensus sequence: CACTTTCCAGACTGGGCA


Dataset #: 1 Motif ID: 96 Motif name: Motif 96

Original motif     Consensus sequence: AAGCTGAGGGAGCCGGCTCC Reverse complement motif     Consensus sequence: GGAGCCGGCTCCCTCAGCTT

Best Matches for Motif ID 96 (Highest to Lowest)

Dataset #: 1
Motif ID: 13
Motif name: Motif 13
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.0900694

Alignment:
AAGCAGGGCGAGGCATTGCC
AAGCTGAGGGAGCCGGCTCC

Original motif     Consensus sequence: AAGCAGGGCGAGGCATTGCC Reverse complement motif     Consensus sequence: GGCAATGCCTCGCCCTGCTT


Dataset #: 1
Motif ID: 108
Motif name: Motif 108
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.11205

Alignment:
CGAGCCTCCCCGAYGAGCGC
GGAGCCGGCTCCCTCAGCTT

Original motif     Consensus sequence: CGAGCCTCCCCGAYGAGCGC Reverse complement motif     Consensus sequence: GCGCTCKTCGGGGAGGCTCG


Dataset #: 1 Motif ID: 97 Motif name: Motif 97

Original motif     Consensus sequence: AAGATGGCCGAAT Reverse complement motif     Consensus sequence: ATTCGGCCATCTT

Best Matches for Motif ID 97 (Highest to Lowest)

Dataset #: 1
Motif ID: 35
Motif name: Motif 35
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 13
Similarity score: 0.0664224

Alignment:
AAGACGGGTGATTTCTG
----AAGATGGCCGAAT

Original motif     Consensus sequence: CAGAAATCACCCGTCTT Reverse complement motif     Consensus sequence: AAGACGGGTGATTTCTG


Dataset #: 1
Motif ID: 308
Motif name: Motif 308
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 6
Number of overlap: 13
Similarity score: 0.0712075

Alignment:
AAATTAGGCCAATTAATAAC
--ATTCGGCCATCTT-----

Original motif     Consensus sequence: AAATTAGGCCAATTAATAAC Reverse complement motif     Consensus sequence: GTTATTAATTGGCCTAATTT


Dataset #: 1 Motif ID: 98 Motif name: Motif 98

Original motif     Consensus sequence: AGTTCCGGGTGGGCGTGGG Reverse complement motif     Consensus sequence: CCCACGCCCACCCGGAACT

Best Matches for Motif ID 98 (Highest to Lowest)

Dataset #: 1
Motif ID: 122
Motif name: Motif 122
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 19
Similarity score: 0.0965972

Alignment:
CTTTCTGGGCTGGCCAAGG
AGTTCCGGGTGGGCGTGGG

Original motif     Consensus sequence: CCTTGGCCAGCCCAGAAAG Reverse complement motif     Consensus sequence: CTTTCTGGGCTGGCCAAGG


Dataset #: 1
Motif ID: 312
Motif name: Motif 312
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 19
Similarity score: 0.0978875

Alignment:
AGGACTGAGGGTGCCYRGGG
AGTTCCGGGTGGGCGTGGG-

Original motif     Consensus sequence: AGGACTGAGGGTGCCYRGGG Reverse complement motif     Consensus sequence: CCCMKGGCACCCTCAGTCCT


Dataset #: 1 Motif ID: 99 Motif name: Motif 99

Original motif     Consensus sequence: GCAAAKGACATGATYTCATT Reverse complement motif     Consensus sequence: AATGAKATCATGTCYTTTGC

Best Matches for Motif ID 99 (Highest to Lowest)

Dataset #: 1
Motif ID: 63
Motif name: Motif 63
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.0793398

Alignment:
AGTGAGAACATRYRRTRTTT
AATGAKATCATGTCYTTTGC

Original motif     Consensus sequence: AGTGAGAACATRYRRTRTTT Reverse complement motif     Consensus sequence: AAAMAMMKMATGTTCTCACT


Dataset #: 1
Motif ID: 19
Motif name: Motif 19
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.0873595

Alignment:
MGGGATATAATCTCCTGGTG
AATGAKATCATGTCYTTTGC

Original motif     Consensus sequence: CACCAGGAGATTATATCCCR Reverse complement motif     Consensus sequence: MGGGATATAATCTCCTGGTG


Dataset #: 1 Motif ID: 100 Motif name: Motif 100

Original motif     Consensus sequence: GCTGGCCCGCAAGCGCCGCG Reverse complement motif     Consensus sequence: CGCGGCGCTTGCGGGCCAGC

Best Matches for Motif ID 100 (Highest to Lowest)

Dataset #: 1
Motif ID: 64
Motif name: Motif 64
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.109117

Alignment:
KCCGGGCCTTAGCTGCCTTC
CGCGGCGCTTGCGGGCCAGC

Original motif     Consensus sequence: GAAGGCAGCTAAGGCCCGGY Reverse complement motif     Consensus sequence: KCCGGGCCTTAGCTGCCTTC


Dataset #: 1
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.111065

Alignment:
GCTGGAGTGCAGTGGCRYGA
GCTGGCCCGCAAGCGCCGCG

Original motif     Consensus sequence: GCTGGAGTGCAGTGGCRYGA Reverse complement motif     Consensus sequence: TCKMGCCACTGCACTCCAGC


Dataset #: 1 Motif ID: 101 Motif name: Motif 101

Original motif     Consensus sequence: CGCCGCCGCCGC Reverse complement motif     Consensus sequence: GCGGCGGCGGCG

Best Matches for Motif ID 101 (Highest to Lowest)

Dataset #: 1
Motif ID: 266
Motif name: Motif 266
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.0686683

Alignment:
GCAGCAGCAGCA
GCGGCGGCGGCG

Original motif     Consensus sequence: GCAGCAGCAGCA Reverse complement motif     Consensus sequence: TGCTGCTGCTGC


Dataset #: 1
Motif ID: 100
Motif name: Motif 100
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 12
Similarity score: 0.0752454

Alignment:
GCTGGCCCGCAAGCGCCGCG
-------CGCCGCCGCCGC-

Original motif     Consensus sequence: GCTGGCCCGCAAGCGCCGCG Reverse complement motif     Consensus sequence: CGCGGCGCTTGCGGGCCAGC


Dataset #: 1 Motif ID: 102 Motif name: Motif 102

Original motif     Consensus sequence: CTCATTTAATCCTCACAAC Reverse complement motif     Consensus sequence: GTTGTGAGGATTAAATGAG

Best Matches for Motif ID 102 (Highest to Lowest)

Dataset #: 1
Motif ID: 310
Motif name: Motif 310
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 19
Similarity score: 0.0961125

Alignment:
CCCATGCAAGTCYRAAATCC
CTCATTTAATCCTCACAAC-

Original motif     Consensus sequence: CCCATGCAAGTCYRAAATCC Reverse complement motif     Consensus sequence: GGATTTMKGACTTGCATGGG


Dataset #: 1
Motif ID: 309
Motif name: Motif 309
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 19
Similarity score: 0.0968109

Alignment:
MTCCTCCAGACCCCAGAATG
CTCATTTAATCCTCACAAC-

Original motif     Consensus sequence: CATTCTGGGGTCTGGAGGAY Reverse complement motif     Consensus sequence: MTCCTCCAGACCCCAGAATG


Dataset #: 1 Motif ID: 103 Motif name: Motif 103

Original motif     Consensus sequence: AAGTGAAATAA Reverse complement motif     Consensus sequence: TTATTTCACTT

Best Matches for Motif ID 103 (Highest to Lowest)

Dataset #: 1
Motif ID: 24
Motif name: Motif 24
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.0659798

Alignment:
CKAGTCAAAGAAA
-AAGTGAAATAA-

Original motif     Consensus sequence: CKAGTCAAAGAAA Reverse complement motif     Consensus sequence: TTTCTTTGACTRG


Dataset #: 1
Motif ID: 281
Motif name: Motif 281
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.068219

Alignment:
AAATGGAATCAT
AAGTGAAATAA-

Original motif     Consensus sequence: AAATGGAATCAT Reverse complement motif     Consensus sequence: ATGATTCCATTT


Dataset #: 1 Motif ID: 104 Motif name: Motif 104

Original motif     Consensus sequence: CAACATGGATGRARCTGGAG Reverse complement motif     Consensus sequence: CTCCAGKTMCATCCATGTTG

Best Matches for Motif ID 104 (Highest to Lowest)

Dataset #: 1
Motif ID: 26
Motif name: Motif 26
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.0969491

Alignment:
CTCCTGCCTCAGCCTCCCRA
CTCCAGKTMCATCCATGTTG

Original motif     Consensus sequence: CTCCTGCCTCAGCCTCCCRA Reverse complement motif     Consensus sequence: TMGGGAGGCTGAGGCAGGAG


Dataset #: 1
Motif ID: 235
Motif name: Motif 235
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 0.576666

Alignment:
TCCAAATGGGAGAAATTGGC-
-CAACATGGATGRARCTGGAG

Original motif     Consensus sequence: TCCAAATGGGAGAAATTGGC Reverse complement motif     Consensus sequence: GCCAATTTCTCCCATTTGGA


Dataset #: 1 Motif ID: 105 Motif name: Motif 105

Original motif     Consensus sequence: GCCTCTCCCTCCACACCTCC Reverse complement motif     Consensus sequence: GGAGGTGTGGAGGGAGAGGC

Best Matches for Motif ID 105 (Highest to Lowest)

Dataset #: 1
Motif ID: 52
Motif name: Motif 52
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.118803

Alignment:
GGTGGAGCTGCCTGCCAGTC
GGAGGTGTGGAGGGAGAGGC

Original motif     Consensus sequence: GACTGGCAGGCAGCTCCACC Reverse complement motif     Consensus sequence: GGTGGAGCTGCCTGCCAGTC


Dataset #: 1
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.11947

Alignment:
TCKMGCCACTGCACTCCAGC
GCCTCTCCCTCCACACCTCC

Original motif     Consensus sequence: GCTGGAGTGCAGTGGCRYGA Reverse complement motif     Consensus sequence: TCKMGCCACTGCACTCCAGC


Dataset #: 1 Motif ID: 106 Motif name: Motif 106

Original motif     Consensus sequence: ATTGGTGTATTTACAATCCC Reverse complement motif     Consensus sequence: GGGATTGTAAATACACCAAT

Best Matches for Motif ID 106 (Highest to Lowest)

Dataset #: 1
Motif ID: 333
Motif name: Motif 333
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.112321

Alignment:
TAGATAATAGCTCCAGCTTT
GGGATTGTAAATACACCAAT

Original motif     Consensus sequence: TAGATAATAGCTCCAGCTTT Reverse complement motif     Consensus sequence: AAAGCTGGAGCTATTATCTA


Dataset #: 1
Motif ID: 70
Motif name: Motif 70
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 19
Similarity score: 0.609937

Alignment:
-GCAGCAMTATTCACAATAG
ATTGGTGTATTTACAATCCC

Original motif     Consensus sequence: CTATTGTGAATARTGCTGC Reverse complement motif     Consensus sequence: GCAGCAMTATTCACAATAG


Dataset #: 1 Motif ID: 107 Motif name: Motif 107

Original motif     Consensus sequence: GAGCCACYGCRCC Reverse complement motif     Consensus sequence: GGMGCKGTGGCTC

Best Matches for Motif ID 107 (Highest to Lowest)

Dataset #: 1
Motif ID: 56
Motif name: Motif 56
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 13
Similarity score: 0.00724402

Alignment:
CRTGAGCCACYGYRCCYGGC
---GAGCCACYGCRCC----

Original motif     Consensus sequence: CRTGAGCCACYGYRCCYGGC Reverse complement motif     Consensus sequence: GCCKGGMKCMGTGGCTCAKG


Dataset #: 1
Motif ID: 10
Motif name: Motif 10
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 13
Similarity score: 0.0668268

Alignment:
AGGASCSTCYSWGCCMGGY
--GAGCCACYGCRCC----

Original motif     Consensus sequence: AGGASCSTCYSWGCCMGGY Reverse complement motif     Consensus sequence: MCCYGGCWSMGASGSTCCT


Dataset #: 1 Motif ID: 108 Motif name: Motif 108

Original motif     Consensus sequence: CGAGCCTCCCCGAYGAGCGC Reverse complement motif     Consensus sequence: GCGCTCKTCGGGGAGGCTCG

Best Matches for Motif ID 108 (Highest to Lowest)

Dataset #: 1
Motif ID: 196
Motif name: Motif 196
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.0943206

Alignment:
CAAGCCTSKGCAATGGCAGG
CGAGCCTCCCCGAYGAGCGC

Original motif     Consensus sequence: CCTGCCATTGCYSAGGCTTG Reverse complement motif     Consensus sequence: CAAGCCTSKGCAATGGCAGG


Dataset #: 1
Motif ID: 194
Motif name: Motif 194
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.095821

Alignment:
CAGCTACTCKTATACCCTTG
GCGCTCKTCGGGGAGGCTCG

Original motif     Consensus sequence: CAAGGGTATAYGAGTAGCTG Reverse complement motif     Consensus sequence: CAGCTACTCKTATACCCTTG


Dataset #: 1 Motif ID: 109 Motif name: Motif 109

Original motif     Consensus sequence: GAGAGAGAGAGAGAGAGAGA Reverse complement motif     Consensus sequence: TCTCTCTCTCTCTCTCTCTC

Best Matches for Motif ID 109 (Highest to Lowest)

Dataset #: 1
Motif ID: 29
Motif name: Motif 29
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.0851551

Alignment:
MGTCTMKCTCTGTKGCCCAG
TCTCTCTCTCTCTCTCTCTC

Original motif     Consensus sequence: CTGGGCRACAGAGYRAGACY Reverse complement motif     Consensus sequence: MGTCTMKCTCTGTKGCCCAG


Dataset #: 1
Motif ID: 145
Motif name: Motif 145
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.0867304

Alignment:
GCCAGTCACAAAARGACAMA
GAGAGAGAGAGAGAGAGAGA

Original motif     Consensus sequence: GCCAGTCACAAAARGACAMA Reverse complement motif     Consensus sequence: TYTGTCMTTTTGTGACTGGC


Dataset #: 1 Motif ID: 110 Motif name: Motif 110

Original motif     Consensus sequence: ATGGGGTGCCA Reverse complement motif     Consensus sequence: TGGCACCCCAT

Best Matches for Motif ID 110 (Highest to Lowest)

Dataset #: 1
Motif ID: 284
Motif name: Motif 284
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 5
Number of overlap: 11
Similarity score: 0.0371465

Alignment:
TCAATGGGCTCCCAAATG
---ATGGGGTGCCA----

Original motif     Consensus sequence: CATTTGGGAGCCCATTGA Reverse complement motif     Consensus sequence: TCAATGGGCTCCCAAATG


Dataset #: 1
Motif ID: 209
Motif name: Motif 209
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0451831

Alignment:
CTGTCAGCCCAT
-TGGCACCCCAT

Original motif     Consensus sequence: CTGTCAGCCCAT Reverse complement motif     Consensus sequence: ATGGGCTGACAG


Dataset #: 1 Motif ID: 111 Motif name: Motif 111

Original motif     Consensus sequence: AGGAGCCCCTCHGCCCR Reverse complement motif     Consensus sequence: KGGGCDGAGGGGCTCCT

Best Matches for Motif ID 111 (Highest to Lowest)

Dataset #: 1
Motif ID: 30
Motif name: Motif 30
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 17
Similarity score: 0.0374525

Alignment:
AGGAGCGCCTCTKCCCGGC
AGGAGCCCCTCHGCCCR--

Original motif     Consensus sequence: AGGAGCGCCTCTKCCCGGC Reverse complement motif     Consensus sequence: GCCGGGRAGAGGCGCTCCT


Dataset #: 1
Motif ID: 43
Motif name: Motif 43
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 17
Similarity score: 0.0498697

Alignment:
AGGAGRCMCTCTGCCTGGC
--AGGAGCCCCTCHGCCCR

Original motif     Consensus sequence: GCCAGGCAGAGRGKCTCCT Reverse complement motif     Consensus sequence: AGGAGRCMCTCTGCCTGGC


Dataset #: 1 Motif ID: 112 Motif name: Motif 112

Original motif     Consensus sequence: GCTGTGTGACCTTGGGCAAG Reverse complement motif     Consensus sequence: CTTGCCCAAGGTCACACAGC

Best Matches for Motif ID 112 (Highest to Lowest)

Dataset #: 1
Motif ID: 56
Motif name: Motif 56
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.100531

Alignment:
GCCKGGMKCMGTGGCTCAKG
GCTGTGTGACCTTGGGCAAG

Original motif     Consensus sequence: CRTGAGCCACYGYRCCYGGC Reverse complement motif     Consensus sequence: GCCKGGMKCMGTGGCTCAKG


Dataset #: 1
Motif ID: 294
Motif name: Motif 294
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 19
Similarity score: 0.580817

Alignment:
-GTGGCCCTCTTCTCACAGCT
CTTGCCCAAGGTCACACAGC-

Original motif     Consensus sequence: AGCTGTGAGAAGAGGGCCAC Reverse complement motif     Consensus sequence: GTGGCCCTCTTCTCACAGCT


Dataset #: 1 Motif ID: 113 Motif name: Motif 113

Original motif     Consensus sequence: CACTTCCTA Reverse complement motif     Consensus sequence: TAGGAAGTG

Best Matches for Motif ID 113 (Highest to Lowest)

Dataset #: 1
Motif ID: 74
Motif name: Motif 74
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 9
Similarity score: 0.0147795

Alignment:
CCATCTAGGAAGTG
-----TAGGAAGTG

Original motif     Consensus sequence: CACTTCCTAGATGG Reverse complement motif     Consensus sequence: CCATCTAGGAAGTG


Dataset #: 1
Motif ID: 153
Motif name: Motif 153
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 9
Similarity score: 0.0332374

Alignment:
CACTAGGGAGTGCC
---TAGGAAGTG--

Original motif     Consensus sequence: CACTAGGGAGTGCC Reverse complement motif     Consensus sequence: GGCACTCCCTAGTG


Dataset #: 1 Motif ID: 114 Motif name: Motif 114

Original motif     Consensus sequence: CTACGTTCTC Reverse complement motif     Consensus sequence: GAGAACGTAG

Best Matches for Motif ID 114 (Highest to Lowest)

Dataset #: 1
Motif ID: 63
Motif name: Motif 63
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 10
Similarity score: 0.0559267

Alignment:
AAAMAMMKMATGTTCTCACT
---CTACGTTCTC-------

Original motif     Consensus sequence: AGTGAGAACATRYRRTRTTT Reverse complement motif     Consensus sequence: AAAMAMMKMATGTTCTCACT


Dataset #: 1
Motif ID: 235
Motif name: Motif 235
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.0641267

Alignment:
TCCAAATGGGAGAAATTGGC
---------GAGAACGTAG-

Original motif     Consensus sequence: TCCAAATGGGAGAAATTGGC Reverse complement motif     Consensus sequence: GCCAATTTCTCCCATTTGGA


Dataset #: 1 Motif ID: 115 Motif name: Motif 115

Original motif     Consensus sequence: ATGATCCAGCAATYCCACTH Reverse complement motif     Consensus sequence: HAGTGGKATTGCTGGATCAT

Best Matches for Motif ID 115 (Highest to Lowest)

Dataset #: 1
Motif ID: 129
Motif name: Motif 129
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 19
Similarity score: 0.0868585

Alignment:
AAGAGGTTTAATTGRCTCA-
HAGTGGKATTGCTGGATCAT

Original motif     Consensus sequence: AAGAGGTTTAATTGRCTCA Reverse complement motif     Consensus sequence: TGAGKCAATTAAACCTCTT


Dataset #: 1
Motif ID: 56
Motif name: Motif 56
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 0.0917072

Alignment:
CRTGAGCCACYGYRCCYGGC-
-ATGATCCAGCAATYCCACTH

Original motif     Consensus sequence: CRTGAGCCACYGYRCCYGGC Reverse complement motif     Consensus sequence: GCCKGGMKCMGTGGCTCAKG


Dataset #: 1 Motif ID: 116 Motif name: Motif 116

Original motif     Consensus sequence: GCAGAGGCGCTCCT Reverse complement motif     Consensus sequence: AGGAGCGCCTCTGC

Best Matches for Motif ID 116 (Highest to Lowest)

Dataset #: 1
Motif ID: 30
Motif name: Motif 30
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.023579

Alignment:
GCCGGGRAGAGGCGCTCCT
GCAGAGGCGCTCCT-----

Original motif     Consensus sequence: AGGAGCGCCTCTKCCCGGC Reverse complement motif     Consensus sequence: GCCGGGRAGAGGCGCTCCT


Dataset #: 1
Motif ID: 43
Motif name: Motif 43
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 6
Number of overlap: 14
Similarity score: 0.0315071

Alignment:
GCCAGGCAGAGRGKCTCCT
-----GCAGAGGCGCTCCT

Original motif     Consensus sequence: GCCAGGCAGAGRGKCTCCT Reverse complement motif     Consensus sequence: AGGAGRCMCTCTGCCTGGC


Dataset #: 1 Motif ID: 117 Motif name: Motif 117

Original motif     Consensus sequence: AACAACAACAACAAMAA Reverse complement motif     Consensus sequence: TTYTTGTTGTTGTTGTT

Best Matches for Motif ID 117 (Highest to Lowest)

Dataset #: 1
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 17
Similarity score: 0.0705339

Alignment:
GTCTCWAMAAAAAAWAMAAA
--AACAACAACAACAAMAA-

Original motif     Consensus sequence: GTCTCWAMAAAAAAWAMAAA Reverse complement motif     Consensus sequence: TTTYTWTTTTTTYTWGAGAC


Dataset #: 1
Motif ID: 66
Motif name: Motif 66
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 17
Similarity score: 0.0820961

Alignment:
TGTGTGTGTGTKTGTGTGT
--TTYTTGTTGTTGTTGTT

Original motif     Consensus sequence: ACACACAYACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTKTGTGTGT


Dataset #: 1 Motif ID: 118 Motif name: Motif 118

Original motif     Consensus sequence: CTCARGTGATCCTCC Reverse complement motif     Consensus sequence: GGAGGATCACKTGAG

Best Matches for Motif ID 118 (Highest to Lowest)

Dataset #: 1
Motif ID: 102
Motif name: Motif 102
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 15
Similarity score: 0.0724382

Alignment:
CTCATTTAATCCTCACAAC
CTCARGTGATCCTCC----

Original motif     Consensus sequence: CTCATTTAATCCTCACAAC Reverse complement motif     Consensus sequence: GTTGTGAGGATTAAATGAG


Dataset #: 1
Motif ID: 350
Motif name: Motif 350
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 15
Similarity score: 0.0817171

Alignment:
TCTGGAGTGGACCTCCAGCA
-CTCARGTGATCCTCC----

Original motif     Consensus sequence: TCTGGAGTGGACCTCCAGCA Reverse complement motif     Consensus sequence: TGCTGGAGGTCCACTCCAGA


Dataset #: 1 Motif ID: 119 Motif name: Motif 119

Original motif     Consensus sequence: AAGTCCAAGATCAAGGTGYY Reverse complement motif     Consensus sequence: KKCACCTTGATCTTGGACTT

Best Matches for Motif ID 119 (Highest to Lowest)

Dataset #: 1
Motif ID: 292
Motif name: Motif 292
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.103662

Alignment:
TTGTCCCACTGGAAGGTCTT
AAGTCCAAGATCAAGGTGYY

Original motif     Consensus sequence: AAGACCTTCCAGTGGGACAA Reverse complement motif     Consensus sequence: TTGTCCCACTGGAAGGTCTT


Dataset #: 1
Motif ID: 331
Motif name: Motif 331
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.107278

Alignment:
GCCTCCTTGAGCTGTGGTGG
KKCACCTTGATCTTGGACTT

Original motif     Consensus sequence: CCACCACAGCTCAAGGAGGC Reverse complement motif     Consensus sequence: GCCTCCTTGAGCTGTGGTGG


Dataset #: 1 Motif ID: 120 Motif name: Motif 120

Original motif     Consensus sequence: CCATGTGSTCCC Reverse complement motif     Consensus sequence: GGGASCACATGG

Best Matches for Motif ID 120 (Highest to Lowest)

Dataset #: 1
Motif ID: 257
Motif name: Motif 257
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.0458809

Alignment:
GAGAACACATGGACA
GGGASCACATGG---

Original motif     Consensus sequence: GAGAACACATGGACA Reverse complement motif     Consensus sequence: TGTCCATGTGTTCTC


Dataset #: 1
Motif ID: 284
Motif name: Motif 284
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 6
Number of overlap: 12
Similarity score: 0.0509107

Alignment:
TCAATGGGCTCCCAAATG
-CCATGTGSTCCC-----

Original motif     Consensus sequence: CATTTGGGAGCCCATTGA Reverse complement motif     Consensus sequence: TCAATGGGCTCCCAAATG


Dataset #: 1 Motif ID: 121 Motif name: Motif 121

Original motif     Consensus sequence: CTASAACCTCCA Reverse complement motif     Consensus sequence: TGGAGGTTSTAG

Best Matches for Motif ID 121 (Highest to Lowest)

Dataset #: 1
Motif ID: 299
Motif name: Motif 299
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 6
Number of overlap: 12
Similarity score: 0.0292892

Alignment:
CCCTGCTAGAACCTCCAA
-----CTASAACCTCCA-

Original motif     Consensus sequence: CCCTGCTAGAACCTCCAA Reverse complement motif     Consensus sequence: TTGGAGGTTCTAGCAGGG


Dataset #: 1
Motif ID: 178
Motif name: Motif 178
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 12
Similarity score: 0.0571056

Alignment:
ATGTGGAGGTGGAAGACAGT
---TGGAGGTTSTAG-----

Original motif     Consensus sequence: ACTGTCTTCCACCTCCACAT Reverse complement motif     Consensus sequence: ATGTGGAGGTGGAAGACAGT


Dataset #: 1 Motif ID: 122 Motif name: Motif 122

Original motif     Consensus sequence: CCTTGGCCAGCCCAGAAAG Reverse complement motif     Consensus sequence: CTTTCTGGGCTGGCCAAGG

Best Matches for Motif ID 122 (Highest to Lowest)

Dataset #: 1
Motif ID: 98
Motif name: Motif 98
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 19
Similarity score: 0.0950931

Alignment:
CCCACGCCCACCCGGAACT
CCTTGGCCAGCCCAGAAAG

Original motif     Consensus sequence: AGTTCCGGGTGGGCGTGGG Reverse complement motif     Consensus sequence: CCCACGCCCACCCGGAACT


Dataset #: 1
Motif ID: 309
Motif name: Motif 309
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 19
Similarity score: 0.0996139

Alignment:
CATTCTGGGGTCTGGAGGAY
CTTTCTGGGCTGGCCAAGG-

Original motif     Consensus sequence: CATTCTGGGGTCTGGAGGAY Reverse complement motif     Consensus sequence: MTCCTCCAGACCCCAGAATG


Dataset #: 1 Motif ID: 123 Motif name: Motif 123

Original motif     Consensus sequence: AGCAGTCTGAG Reverse complement motif     Consensus sequence: CTCAGACTGCT

Best Matches for Motif ID 123 (Highest to Lowest)

Dataset #: 1
Motif ID: 26
Motif name: Motif 26
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 8
Number of overlap: 11
Similarity score: 0.0598949

Alignment:
TMGGGAGGCTGAGGCAGGAG
-------AGCAGTCTGAG--

Original motif     Consensus sequence: CTCCTGCCTCAGCCTCCCRA Reverse complement motif     Consensus sequence: TMGGGAGGCTGAGGCAGGAG


Dataset #: 1
Motif ID: 165
Motif name: Motif 165
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 8
Number of overlap: 11
Similarity score: 0.0609349

Alignment:
AGCTCMKCCTCCTGTCAGAT
--CTCAGACTGCT-------

Original motif     Consensus sequence: ATCTGACAGGAGGYRGAGCT Reverse complement motif     Consensus sequence: AGCTCMKCCTCCTGTCAGAT


Dataset #: 1 Motif ID: 124 Motif name: Motif 124

Original motif     Consensus sequence: AAAATAAAA Reverse complement motif     Consensus sequence: TTTTATTTT

Best Matches for Motif ID 124 (Highest to Lowest)

Dataset #: 1
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 9
Similarity score: 0.021153

Alignment:
GTCTCWAMAAAAAAWAMAAA
----------AAAATAAAA-

Original motif     Consensus sequence: GTCTCWAMAAAAAAWAMAAA Reverse complement motif     Consensus sequence: TTTYTWTTTTTTYTWGAGAC


Dataset #: 1
Motif ID: 337
Motif name: Motif 337
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 9
Similarity score: 0.0464816

Alignment:
TTTCTAGTTT
-TTTTATTTT

Original motif     Consensus sequence: AAACTAGAAA Reverse complement motif     Consensus sequence: TTTCTAGTTT


Dataset #: 1 Motif ID: 125 Motif name: Motif 125

Original motif     Consensus sequence: CGCCCGGCCAGCCGC Reverse complement motif     Consensus sequence: GCGGCTGGCCGGGCG

Best Matches for Motif ID 125 (Highest to Lowest)

Dataset #: 1
Motif ID: 98
Motif name: Motif 98
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 15
Similarity score: 0.0866862

Alignment:
AGTTCCGGGTGGGCGTGGG
GCGGCTGGCCGGGCG----

Original motif     Consensus sequence: AGTTCCGGGTGGGCGTGGG Reverse complement motif     Consensus sequence: CCCACGCCCACCCGGAACT


Dataset #: 1
Motif ID: 92
Motif name: Motif 92
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 15
Similarity score: 0.0950761

Alignment:
GGTGGGGGGGTCAGCCCCC
-CGCCCGGCCAGCCGC---

Original motif     Consensus sequence: GGGGGCTGACCCCCCCACC Reverse complement motif     Consensus sequence: GGTGGGGGGGTCAGCCCCC


Dataset #: 1 Motif ID: 126 Motif name: Motif 126

Original motif     Consensus sequence: AYGCCTGTAATC Reverse complement motif     Consensus sequence: GATTACAGGCMT

Best Matches for Motif ID 126 (Highest to Lowest)

Dataset #: 1
Motif ID: 278
Motif name: Motif 278
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.0669992

Alignment:
ACTTTCAGGCATAACA
GATTACAGGCMT----

Original motif     Consensus sequence: ACTTTCAGGCATAACA Reverse complement motif     Consensus sequence: TGTTATGCCTGAAAGT


Dataset #: 1
Motif ID: 211
Motif name: Motif 211
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.0695709

Alignment:
GACTTCAAGAATGAAGCCG
GATTACAGGCMT-------

Original motif     Consensus sequence: GACTTCAAGAATGAAGCCG Reverse complement motif     Consensus sequence: CGGCTTCATTCTTGAAGTC


Dataset #: 1 Motif ID: 127 Motif name: Motif 127

Original motif     Consensus sequence: CCCCAACCCC Reverse complement motif     Consensus sequence: GGGGTTGGGG

Best Matches for Motif ID 127 (Highest to Lowest)

Dataset #: 1
Motif ID: 46
Motif name: Motif 46
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0369517

Alignment:
CCCCWCCCCCA
CCCCAACCCC-

Original motif     Consensus sequence: CCCCWCCCCCA Reverse complement motif     Consensus sequence: TGGGGGWGGGG


Dataset #: 1
Motif ID: 92
Motif name: Motif 92
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0650488

Alignment:
GGGGGCTGACCCCCCCACC
---------CCCCAACCCC

Original motif     Consensus sequence: GGGGGCTGACCCCCCCACC Reverse complement motif     Consensus sequence: GGTGGGGGGGTCAGCCCCC


Dataset #: 1 Motif ID: 128 Motif name: Motif 128

Original motif     Consensus sequence: CCGCACTCGGAGCRG Reverse complement motif     Consensus sequence: CMGCTCCGAGTGCGG

Best Matches for Motif ID 128 (Highest to Lowest)

Dataset #: 1
Motif ID: 95
Motif name: Motif 95
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 15
Similarity score: 0.0771871

Alignment:
CACCTCCCAGACMGGGT
CMGCTCCGAGTGCGG--

Original motif     Consensus sequence: ACCCYGTCTGGGAGGTG Reverse complement motif     Consensus sequence: CACCTCCCAGACMGGGT


Dataset #: 1
Motif ID: 321
Motif name: Motif 321
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 15
Similarity score: 0.0895427

Alignment:
AAGCTCGAACTGGGTGGAGC
----CCGCACTCGGAGCRG-

Original motif     Consensus sequence: AAGCTCGAACTGGGTGGAGC Reverse complement motif     Consensus sequence: GCTCCACCCAGTTCGAGCTT


Dataset #: 1 Motif ID: 129 Motif name: Motif 129

Original motif     Consensus sequence: AAGAGGTTTAATTGRCTCA Reverse complement motif     Consensus sequence: TGAGKCAATTAAACCTCTT

Best Matches for Motif ID 129 (Highest to Lowest)

Dataset #: 1
Motif ID: 292
Motif name: Motif 292
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 19
Similarity score: 0.093225

Alignment:
AAGACCTTCCAGTGGGACAA
AAGAGGTTTAATTGRCTCA-

Original motif     Consensus sequence: AAGACCTTCCAGTGGGACAA Reverse complement motif     Consensus sequence: TTGTCCCACTGGAAGGTCTT


Dataset #: 1
Motif ID: 115
Motif name: Motif 115
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 19
Similarity score: 0.0969481

Alignment:
ATGATCCAGCAATYCCACTH
TGAGKCAATTAAACCTCTT-

Original motif     Consensus sequence: ATGATCCAGCAATYCCACTH Reverse complement motif     Consensus sequence: HAGTGGKATTGCTGGATCAT


Dataset #: 1 Motif ID: 130 Motif name: Motif 130

Original motif     Consensus sequence: ATTATTATYAT Reverse complement motif     Consensus sequence: ATMATAATAAT

Best Matches for Motif ID 130 (Highest to Lowest)

Dataset #: 1
Motif ID: 190
Motif name: Motif 190
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0362259

Alignment:
ATCATTCTTATGCCTTTG
ATTATTATYAT-------

Original motif     Consensus sequence: CAAAGGCATAAGAATGAT Reverse complement motif     Consensus sequence: ATCATTCTTATGCCTTTG


Dataset #: 1
Motif ID: 270
Motif name: Motif 270
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.0458076

Alignment:
CCTMACAATCATGG
-ATMATAATAAT--

Original motif     Consensus sequence: CCATGATTGTRAGG Reverse complement motif     Consensus sequence: CCTMACAATCATGG


Dataset #: 1 Motif ID: 131 Motif name: Motif 131

Original motif     Consensus sequence: CCTGGGTTCAA Reverse complement motif     Consensus sequence: TTGAACCCAGG

Best Matches for Motif ID 131 (Highest to Lowest)

Dataset #: 1
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 6
Number of overlap: 11
Similarity score: 0.044498

Alignment:
ARCTCCTGKSCTCAAGKGAT
-----CCTGGGTTCAA----

Original motif     Consensus sequence: ATCRCTTGAGSYCAGGAGKT Reverse complement motif     Consensus sequence: ARCTCCTGKSCTCAAGKGAT


Dataset #: 1
Motif ID: 82
Motif name: Motif 82
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 6
Number of overlap: 11
Similarity score: 0.0639634

Alignment:
GCTTAGCACCYGGGCCAGC
-----TTGAACCCAGG---

Original motif     Consensus sequence: GCTTAGCACCYGGGCCAGC Reverse complement motif     Consensus sequence: GCTGGCCCKGGTGCTAAGC


Dataset #: 1 Motif ID: 132 Motif name: Motif 132

Original motif     Consensus sequence: CAAGATGGCGGC Reverse complement motif     Consensus sequence: GCCGCCATCTTG

Best Matches for Motif ID 132 (Highest to Lowest)

Dataset #: 1
Motif ID: 191
Motif name: Motif 191
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 8
Number of overlap: 12
Similarity score: 0.0630794

Alignment:
GCTGCARTCTCGGCACTTT
GCCGCCATCTTG-------

Original motif     Consensus sequence: AAAGTGCCGAGAKTGCAGC Reverse complement motif     Consensus sequence: GCTGCARTCTCGGCACTTT


Dataset #: 1
Motif ID: 294
Motif name: Motif 294
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 9
Number of overlap: 12
Similarity score: 0.0641012

Alignment:
AGCTGTGAGAAGAGGGCCAC
--------CAAGATGGCGGC

Original motif     Consensus sequence: AGCTGTGAGAAGAGGGCCAC Reverse complement motif     Consensus sequence: GTGGCCCTCTTCTCACAGCT


Dataset #: 1 Motif ID: 133 Motif name: Motif 133

Original motif     Consensus sequence: CTGYGTCCCCA Reverse complement motif     Consensus sequence: TGGGGACMCAG

Best Matches for Motif ID 133 (Highest to Lowest)

Dataset #: 1
Motif ID: 84
Motif name: Motif 84
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0319466

Alignment:
GGCACTGCTGGGGGACCCAG
---------TGGGGACMCAG

Original motif     Consensus sequence: CTGGGTCCCCCAGCAGTGCC Reverse complement motif     Consensus sequence: GGCACTGCTGGGGGACCCAG


Dataset #: 1
Motif ID: 193
Motif name: Motif 193
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 11
Similarity score: 0.0508347

Alignment:
GKCTGTACCCCCATTGTAT
--CTGYGTCCCCA------

Original motif     Consensus sequence: ATACAATGGGGGTACAGRC Reverse complement motif     Consensus sequence: GKCTGTACCCCCATTGTAT


Dataset #: 1 Motif ID: 134 Motif name: Motif 134

Original motif     Consensus sequence: CAAACTGCA Reverse complement motif     Consensus sequence: TGCAGTTTG

Best Matches for Motif ID 134 (Highest to Lowest)

Dataset #: 1
Motif ID: 73
Motif name: Motif 73
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 9
Similarity score: 0

Alignment:
CTTGCAGTTTG
--TGCAGTTTG

Original motif     Consensus sequence: CAAACTGCAAG Reverse complement motif     Consensus sequence: CTTGCAGTTTG


Dataset #: 1
Motif ID: 304
Motif name: Motif 304
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 9
Similarity score: 0.0499634

Alignment:
AGTGTTTCCAAMCTGCT
--------CAAACTGCA

Original motif     Consensus sequence: AGTGTTTCCAAMCTGCT Reverse complement motif     Consensus sequence: AGCAGYTTGGAAACACT


Dataset #: 1 Motif ID: 135 Motif name: Motif 135

Original motif     Consensus sequence: CTCTTGTTGCCCAG Reverse complement motif     Consensus sequence: CTGGGCAACAAGAG

Best Matches for Motif ID 135 (Highest to Lowest)

Dataset #: 1
Motif ID: 100
Motif name: Motif 100
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 14
Similarity score: 0.0668647

Alignment:
GCTGGCCCGCAAGCGCCGCG
-----CTGGGCAACAAGAG-

Original motif     Consensus sequence: GCTGGCCCGCAAGCGCCGCG Reverse complement motif     Consensus sequence: CGCGGCGCTTGCGGGCCAGC


Dataset #: 1
Motif ID: 29
Motif name: Motif 29
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 7
Number of overlap: 14
Similarity score: 0.0777944

Alignment:
MGTCTMKCTCTGTKGCCCAG
CTCTTGTTGCCCAG------

Original motif     Consensus sequence: CTGGGCRACAGAGYRAGACY Reverse complement motif     Consensus sequence: MGTCTMKCTCTGTKGCCCAG


Dataset #: 1 Motif ID: 136 Motif name: Motif 136

Original motif     Consensus sequence: CCCTCACTGCCCGGGG Reverse complement motif     Consensus sequence: CCCCGGGCAGTGAGGG

Best Matches for Motif ID 136 (Highest to Lowest)

Dataset #: 1
Motif ID: 155
Motif name: Motif 155
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 16
Similarity score: 0.0741545

Alignment:
GCCKCCCCGTCCGGGAGGGA
---CCCCGGGCAGTGAGGG-

Original motif     Consensus sequence: TCCCTCCCGGACGGGGYGGC Reverse complement motif     Consensus sequence: GCCKCCCCGTCCGGGAGGGA


Dataset #: 1
Motif ID: 201
Motif name: Motif 201
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 16
Similarity score: 0.0805996

Alignment:
GTAACACTCACCGCGARGGT
----CCCTCACTGCCCGGGG

Original motif     Consensus sequence: GTAACACTCACCGCGARGGT Reverse complement motif     Consensus sequence: ACCKTCGCGGTGAGTGTTAC


Dataset #: 1 Motif ID: 137 Motif name: Motif 137

Original motif     Consensus sequence: AGGTTTGTTACATAGGTAWA Reverse complement motif     Consensus sequence: TWTACCTATGTAACAAACCT

Best Matches for Motif ID 137 (Highest to Lowest)

Dataset #: 1
Motif ID: 112
Motif name: Motif 112
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 0.0884615

Alignment:
CTTGCCCAAGGTCACACAGC-
-TWTACCTATGTAACAAACCT

Original motif     Consensus sequence: GCTGTGTGACCTTGGGCAAG Reverse complement motif     Consensus sequence: CTTGCCCAAGGTCACACAGC


Dataset #: 1
Motif ID: 83
Motif name: Motif 83
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 0.0899122

Alignment:
AAAATGTGGTAYATAYAYAC-
-AGGTTTGTTACATAGGTAWA

Original motif     Consensus sequence: AAAATGTGGTAYATAYAYAC Reverse complement motif     Consensus sequence: GTKTMTATMTACCACATTTT


Dataset #: 1 Motif ID: 138 Motif name: Motif 138

Original motif     Consensus sequence: CAGCCAGATCRSCC Reverse complement motif     Consensus sequence: GGSKGATCTGGCTG

Best Matches for Motif ID 138 (Highest to Lowest)

Dataset #: 1
Motif ID: 52
Motif name: Motif 52
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 7
Number of overlap: 14
Similarity score: 0.0576267

Alignment:
GGTGGAGCTGCCTGCCAGTC
GGSKGATCTGGCTG------

Original motif     Consensus sequence: GACTGGCAGGCAGCTCCACC Reverse complement motif     Consensus sequence: GGTGGAGCTGCCTGCCAGTC


Dataset #: 1
Motif ID: 299
Motif name: Motif 299
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 14
Similarity score: 0.0761753

Alignment:
TTGGAGGTTCTAGCAGGG
--GGSKGATCTGGCTG--

Original motif     Consensus sequence: CCCTGCTAGAACCTCCAA Reverse complement motif     Consensus sequence: TTGGAGGTTCTAGCAGGG


Dataset #: 1 Motif ID: 139 Motif name: Motif 139

Original motif     Consensus sequence: AGCCYCTGGYAACCAYYAWT Reverse complement motif     Consensus sequence: AWTKKTGGTTKCCAGKGGCT

Best Matches for Motif ID 139 (Highest to Lowest)

Dataset #: 1
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.087556

Alignment:
ATCRCTTGAGSYCAGGAGKT
AWTKKTGGTTKCCAGKGGCT

Original motif     Consensus sequence: ATCRCTTGAGSYCAGGAGKT Reverse complement motif     Consensus sequence: ARCTCCTGKSCTCAAGKGAT


Dataset #: 1
Motif ID: 176
Motif name: Motif 176
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.0947311

Alignment:
AGGCCCCAGTGTSTGTTGTT
AGCCYCTGGYAACCAYYAWT

Original motif     Consensus sequence: AGGCCCCAGTGTSTGTTGTT Reverse complement motif     Consensus sequence: AACAACASACACTGGGGCCT


Dataset #: 1 Motif ID: 140 Motif name: Motif 140

Original motif     Consensus sequence: CTCCATGAAGTC Reverse complement motif     Consensus sequence: GACTTCATGGAG

Best Matches for Motif ID 140 (Highest to Lowest)

Dataset #: 1
Motif ID: 211
Motif name: Motif 211
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 8
Number of overlap: 12
Similarity score: 0.0741011

Alignment:
GACTTCAAGAATGAAGCCG
GACTTCATGGAG-------

Original motif     Consensus sequence: GACTTCAAGAATGAAGCCG Reverse complement motif     Consensus sequence: CGGCTTCATTCTTGAAGTC


Dataset #: 1
Motif ID: 321
Motif name: Motif 321
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 12
Similarity score: 0.0805058

Alignment:
AAGCTCGAACTGGGTGGAGC
-------GACTTCATGGAG-

Original motif     Consensus sequence: AAGCTCGAACTGGGTGGAGC Reverse complement motif     Consensus sequence: GCTCCACCCAGTTCGAGCTT


Dataset #: 1 Motif ID: 141 Motif name: Motif 141

Original motif     Consensus sequence: AAGGTCCATGTAG Reverse complement motif     Consensus sequence: CTACATGGACCTT

Best Matches for Motif ID 141 (Highest to Lowest)

Dataset #: 1
Motif ID: 299
Motif name: Motif 299
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 13
Similarity score: 0.0879979

Alignment:
CCCTGCTAGAACCTCCAA
--CTACATGGACCTT---

Original motif     Consensus sequence: CCCTGCTAGAACCTCCAA Reverse complement motif     Consensus sequence: TTGGAGGTTCTAGCAGGG


Dataset #: 1
Motif ID: 225
Motif name: Motif 225
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 8
Number of overlap: 13
Similarity score: 0.0909434

Alignment:
GCACATGTAYCCYAGAACTT
CTACATGGACCTT-------

Original motif     Consensus sequence: GCACATGTAYCCYAGAACTT Reverse complement motif     Consensus sequence: AAGTTCTKGGKTACATGTGC


Dataset #: 1 Motif ID: 142 Motif name: Motif 142

Original motif     Consensus sequence: CAGATGTC Reverse complement motif     Consensus sequence: GACATCTG

Best Matches for Motif ID 142 (Highest to Lowest)

Dataset #: 1
Motif ID: 272
Motif name: Motif 272
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0284091

Alignment:
CAGCTGTCAC
CAGATGTC--

Original motif     Consensus sequence: CAGCTGTCAC Reverse complement motif     Consensus sequence: GTGACAGCTG


Dataset #: 1
Motif ID: 269
Motif name: Motif 269
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0407488

Alignment:
GCACATGTCGCT
-CAGATGTC---

Original motif     Consensus sequence: AGCGACATGTGC Reverse complement motif     Consensus sequence: GCACATGTCGCT


Dataset #: 1 Motif ID: 143 Motif name: Motif 143

Original motif     Consensus sequence: CTGCGTCGCTCAC Reverse complement motif     Consensus sequence: GTGAGCGACGCAG

Best Matches for Motif ID 143 (Highest to Lowest)

Dataset #: 1
Motif ID: 84
Motif name: Motif 84
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 8
Number of overlap: 13
Similarity score: 0.0703083

Alignment:
CTGGGTCCCCCAGCAGTGCC
CTGCGTCGCTCAC-------

Original motif     Consensus sequence: CTGGGTCCCCCAGCAGTGCC Reverse complement motif     Consensus sequence: GGCACTGCTGGGGGACCCAG


Dataset #: 1
Motif ID: 56
Motif name: Motif 56
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 7
Number of overlap: 13
Similarity score: 0.0789125

Alignment:
CRTGAGCCACYGYRCCYGGC
------GTGAGCGACGCAG-

Original motif     Consensus sequence: CRTGAGCCACYGYRCCYGGC Reverse complement motif     Consensus sequence: GCCKGGMKCMGTGGCTCAKG


Dataset #: 1 Motif ID: 144 Motif name: Motif 144

Original motif     Consensus sequence: CCGCTGCACTGTGGGAGCCC Reverse complement motif     Consensus sequence: GGGCTCCCACAGTGCAGCGG

Best Matches for Motif ID 144 (Highest to Lowest)

Dataset #: 1
Motif ID: 61
Motif name: Motif 61
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 0.0905032

Alignment:
TGGCTTCACCCAGTGGATCC-
-GGGCTCCCACAGTGCAGCGG

Original motif     Consensus sequence: GGATCCACTGGGTGAAGCCA Reverse complement motif     Consensus sequence: TGGCTTCACCCAGTGGATCC


Dataset #: 1
Motif ID: 211
Motif name: Motif 211
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 19
Similarity score: 0.0928981

Alignment:
-GACTTCAAGAATGAAGCCG
GGGCTCCCACAGTGCAGCGG

Original motif     Consensus sequence: GACTTCAAGAATGAAGCCG Reverse complement motif     Consensus sequence: CGGCTTCATTCTTGAAGTC


Dataset #: 1 Motif ID: 145 Motif name: Motif 145

Original motif     Consensus sequence: GCCAGTCACAAAARGACAMA Reverse complement motif     Consensus sequence: TYTGTCMTTTTGTGACTGGC

Best Matches for Motif ID 145 (Highest to Lowest)

Dataset #: 1
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.0929275

Alignment:
GTCTCWAMAAAAAAWAMAAA
GCCAGTCACAAAARGACAMA

Original motif     Consensus sequence: GTCTCWAMAAAAAAWAMAAA Reverse complement motif     Consensus sequence: TTTYTWTTTTTTYTWGAGAC


Dataset #: 1
Motif ID: 109
Motif name: Motif 109
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.0984643

Alignment:
GAGAGAGAGAGAGAGAGAGA
GCCAGTCACAAAARGACAMA

Original motif     Consensus sequence: GAGAGAGAGAGAGAGAGAGA Reverse complement motif     Consensus sequence: TCTCTCTCTCTCTCTCTCTC


Dataset #: 1 Motif ID: 146 Motif name: Motif 146

Original motif     Consensus sequence: CTGTCACCCC Reverse complement motif     Consensus sequence: GGGGTGACAG

Best Matches for Motif ID 146 (Highest to Lowest)

Dataset #: 1
Motif ID: 1
Motif name: Motif 1
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 10
Similarity score: 0.00304976

Alignment:
GGGGTGACAGABGB
----GGGGTGACAG

Original motif     Consensus sequence: GGGGTGACAGABGB Reverse complement motif     Consensus sequence: BCVTCTGTCACCCC


Dataset #: 1
Motif ID: 209
Motif name: Motif 209
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.021009

Alignment:
ATGGGCTGACAG
--GGGGTGACAG

Original motif     Consensus sequence: CTGTCAGCCCAT Reverse complement motif     Consensus sequence: ATGGGCTGACAG


Dataset #: 1 Motif ID: 147 Motif name: Motif 147

Original motif     Consensus sequence: CTGGGCACCATTGA Reverse complement motif     Consensus sequence: TCAATGGTGCCCAG

Best Matches for Motif ID 147 (Highest to Lowest)

Dataset #: 1
Motif ID: 29
Motif name: Motif 29
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 7
Number of overlap: 14
Similarity score: 0.0836978

Alignment:
MGTCTMKCTCTGTKGCCCAG
------TCAATGGTGCCCAG

Original motif     Consensus sequence: CTGGGCRACAGAGYRAGACY Reverse complement motif     Consensus sequence: MGTCTMKCTCTGTKGCCCAG


Dataset #: 1
Motif ID: 332
Motif name: Motif 332
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.088413

Alignment:
GTTTAACCATTGAGGGCCAG
------TCAATGGTGCCCAG

Original motif     Consensus sequence: CTGGCCCTCAATGGTTAAAC Reverse complement motif     Consensus sequence: GTTTAACCATTGAGGGCCAG


Dataset #: 1 Motif ID: 148 Motif name: Motif 148

Original motif     Consensus sequence: AAAGAGAGTCAGCGAAG Reverse complement motif     Consensus sequence: CTTCGCTGACTCTCTTT

Best Matches for Motif ID 148 (Highest to Lowest)

Dataset #: 1
Motif ID: 109
Motif name: Motif 109
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 17
Similarity score: 0.0787922

Alignment:
GAGAGAGAGAGAGAGAGAGA
-AAAGAGAGTCAGCGAAG--

Original motif     Consensus sequence: GAGAGAGAGAGAGAGAGAGA Reverse complement motif     Consensus sequence: TCTCTCTCTCTCTCTCTCTC


Dataset #: 1
Motif ID: 48
Motif name: Motif 48
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 17
Similarity score: 0.0890404

Alignment:
CGTCGCTCACGCTGGGAGCT
CTTCGCTGACTCTCTTT---

Original motif     Consensus sequence: AGCTCCCAGCGTGAGCGACG Reverse complement motif     Consensus sequence: CGTCGCTCACGCTGGGAGCT


Dataset #: 1 Motif ID: 149 Motif name: Motif 149

Original motif     Consensus sequence: ACTCAGCCCRCCTGCACCC Reverse complement motif     Consensus sequence: GGGTGCAGGMGGGCTGAGT

Best Matches for Motif ID 149 (Highest to Lowest)

Dataset #: 1
Motif ID: 98
Motif name: Motif 98
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 19
Similarity score: 0.107094

Alignment:
AGTTCCGGGTGGGCGTGGG
GGGTGCAGGMGGGCTGAGT

Original motif     Consensus sequence: AGTTCCGGGTGGGCGTGGG Reverse complement motif     Consensus sequence: CCCACGCCCACCCGGAACT


Dataset #: 1
Motif ID: 82
Motif name: Motif 82
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 19
Similarity score: 0.11583

Alignment:
GCTTAGCACCYGGGCCAGC
ACTCAGCCCRCCTGCACCC

Original motif     Consensus sequence: GCTTAGCACCYGGGCCAGC Reverse complement motif     Consensus sequence: GCTGGCCCKGGTGCTAAGC


Dataset #: 1 Motif ID: 150 Motif name: Motif 150

Original motif     Consensus sequence: ATTGCTAGCACA Reverse complement motif     Consensus sequence: TGTGCTAGCAAT

Best Matches for Motif ID 150 (Highest to Lowest)

Dataset #: 1
Motif ID: 115
Motif name: Motif 115
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 12
Similarity score: 0.0632108

Alignment:
ATGATCCAGCAATYCCACTH
-------TGTGCTAGCAAT-

Original motif     Consensus sequence: ATGATCCAGCAATYCCACTH Reverse complement motif     Consensus sequence: HAGTGGKATTGCTGGATCAT


Dataset #: 1
Motif ID: 306
Motif name: Motif 306
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 12
Similarity score: 0.0772146

Alignment:
GACATGAGCTGGCGCTTG
----TGTGCTAGCAAT--

Original motif     Consensus sequence: GACATGAGCTGGCGCTTG Reverse complement motif     Consensus sequence: CAAGCGCCAGCTCATGTC


Dataset #: 1 Motif ID: 151 Motif name: Motif 151

Original motif     Consensus sequence: CATTGTAGB Reverse complement motif     Consensus sequence: BCTACAATG

Best Matches for Motif ID 151 (Highest to Lowest)

Dataset #: 1
Motif ID: 317
Motif name: Motif 317
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 9
Similarity score: 0.0584909

Alignment:
ACATGCTACAACAT
----BCTACAATG-

Original motif     Consensus sequence: ACATGCTACAACAT Reverse complement motif     Consensus sequence: ATGTTGTAGCATGT


Dataset #: 1
Motif ID: 144
Motif name: Motif 144
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 7
Number of overlap: 9
Similarity score: 0.0645319

Alignment:
CCGCTGCACTGTGGGAGCCC
------CATTGTAGB-----

Original motif     Consensus sequence: CCGCTGCACTGTGGGAGCCC Reverse complement motif     Consensus sequence: GGGCTCCCACAGTGCAGCGG


Dataset #: 1 Motif ID: 152 Motif name: Motif 152

Original motif     Consensus sequence: TAAAATAA Reverse complement motif     Consensus sequence: TTATTTTA

Best Matches for Motif ID 152 (Highest to Lowest)

Dataset #: 1
Motif ID: 357
Motif name: Motif 357
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0340112

Alignment:
TAATTTTATGTGTCAACTTG
TTATTTTA------------

Original motif     Consensus sequence: CAAGTTGACACATAAAATTA Reverse complement motif     Consensus sequence: TAATTTTATGTGTCAACTTG


Dataset #: 1
Motif ID: 103
Motif name: Motif 103
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0363851

Alignment:
AAGTGAAATAA
---TAAAATAA

Original motif     Consensus sequence: AAGTGAAATAA Reverse complement motif     Consensus sequence: TTATTTCACTT


Dataset #: 1 Motif ID: 153 Motif name: Motif 153

Original motif     Consensus sequence: CACTAGGGAGTGCC Reverse complement motif     Consensus sequence: GGCACTCCCTAGTG

Best Matches for Motif ID 153 (Highest to Lowest)

Dataset #: 1
Motif ID: 61
Motif name: Motif 61
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 14
Similarity score: 0.0824482

Alignment:
GGATCCACTGGGTGAAGCCA
-----CACTAGGGAGTGCC-

Original motif     Consensus sequence: GGATCCACTGGGTGAAGCCA Reverse complement motif     Consensus sequence: TGGCTTCACCCAGTGGATCC


Dataset #: 1
Motif ID: 84
Motif name: Motif 84
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.082834

Alignment:
CTGGGTCCCCCAGCAGTGCC
------CACTAGGGAGTGCC

Original motif     Consensus sequence: CTGGGTCCCCCAGCAGTGCC Reverse complement motif     Consensus sequence: GGCACTGCTGGGGGACCCAG


Dataset #: 1 Motif ID: 154 Motif name: Motif 154

Original motif     Consensus sequence: CATTAGATTCTCATAGGA Reverse complement motif     Consensus sequence: TCCTATGAGAATCTAATG

Best Matches for Motif ID 154 (Highest to Lowest)

Dataset #: 1
Motif ID: 262
Motif name: Motif 262
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 18
Similarity score: 0.100102

Alignment:
GACAGGAGATTAACACTGAG
--CATTAGATTCTCATAGGA

Original motif     Consensus sequence: CTCAGTGTTAATCTCCTGTC Reverse complement motif     Consensus sequence: GACAGGAGATTAACACTGAG


Dataset #: 1
Motif ID: 299
Motif name: Motif 299
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 18
Similarity score: 0.111266

Alignment:
TTGGAGGTTCTAGCAGGG
CATTAGATTCTCATAGGA

Original motif     Consensus sequence: CCCTGCTAGAACCTCCAA Reverse complement motif     Consensus sequence: TTGGAGGTTCTAGCAGGG


Dataset #: 1 Motif ID: 155 Motif name: Motif 155

Original motif     Consensus sequence: TCCCTCCCGGACGGGGYGGC Reverse complement motif     Consensus sequence: GCCKCCCCGTCCGGGAGGGA

Best Matches for Motif ID 155 (Highest to Lowest)

Dataset #: 1
Motif ID: 331
Motif name: Motif 331
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.112683

Alignment:
GCCTCCTTGAGCTGTGGTGG
GCCKCCCCGTCCGGGAGGGA

Original motif     Consensus sequence: CCACCACAGCTCAAGGAGGC Reverse complement motif     Consensus sequence: GCCTCCTTGAGCTGTGGTGG


Dataset #: 1
Motif ID: 2
Motif name: Motif 2
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 19
Similarity score: 0.597996

Alignment:
-ATTAGCYRGGCRTGGTGGC
TCCCTCCCGGACGGGGYGGC

Original motif     Consensus sequence: ATTAGCYRGGCRTGGTGGC Reverse complement motif     Consensus sequence: GCCACCAMGCCMKGCTAAT


Dataset #: 1 Motif ID: 156 Motif name: Motif 156

Original motif     Consensus sequence: CACTTCCCAGAC Reverse complement motif     Consensus sequence: GTCTGGGAAGTG

Best Matches for Motif ID 156 (Highest to Lowest)

Dataset #: 1
Motif ID: 27
Motif name: Motif 27
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 7
Number of overlap: 12
Similarity score: 0.00564821

Alignment:
CACTTCCCAGACGGGGCG
CACTTCCCAGAC------

Original motif     Consensus sequence: CACTTCCCAGACGGGGCG Reverse complement motif     Consensus sequence: CGCCCCGTCTGGGAAGTG


Dataset #: 1
Motif ID: 95
Motif name: Motif 95
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 6
Number of overlap: 12
Similarity score: 0.0183065

Alignment:
CACCTCCCAGACMGGGT
-----CACTTCCCAGAC

Original motif     Consensus sequence: ACCCYGTCTGGGAGGTG Reverse complement motif     Consensus sequence: CACCTCCCAGACMGGGT


Dataset #: 1 Motif ID: 157 Motif name: Motif 157

Original motif     Consensus sequence: GCGCACGGCGCGG Reverse complement motif     Consensus sequence: CCGCGCCGTGCGC

Best Matches for Motif ID 157 (Highest to Lowest)

Dataset #: 1
Motif ID: 128
Motif name: Motif 128
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 13
Similarity score: 0.056845

Alignment:
CMGCTCCGAGTGCGG
CCGCGCCGTGCGC--

Original motif     Consensus sequence: CCGCACTCGGAGCRG Reverse complement motif     Consensus sequence: CMGCTCCGAGTGCGG


Dataset #: 1
Motif ID: 155
Motif name: Motif 155
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 13
Similarity score: 0.0678809

Alignment:
GCCKCCCCGTCCGGGAGGGA
-CCGCGCCGTGCGC------

Original motif     Consensus sequence: TCCCTCCCGGACGGGGYGGC Reverse complement motif     Consensus sequence: GCCKCCCCGTCCGGGAGGGA


Dataset #: 1 Motif ID: 158 Motif name: Motif 158

Original motif     Consensus sequence: TAGTTTGCTGA Reverse complement motif     Consensus sequence: TCAGCAAACTA

Best Matches for Motif ID 158 (Highest to Lowest)

Dataset #: 1
Motif ID: 280
Motif name: Motif 280
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 11
Similarity score: 0.0721214

Alignment:
ACATCMTCTGAAATCTAGG
------TCAGCAAACTA--

Original motif     Consensus sequence: CCTAGATTTCAGARGATGT Reverse complement motif     Consensus sequence: ACATCMTCTGAAATCTAGG


Dataset #: 1
Motif ID: 23
Motif name: Motif 23
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 11
Similarity score: 0.077411

Alignment:
GGTTCATCTCACTAGGGAGT
------TCAGCAAACTA---

Original motif     Consensus sequence: GGTTCATCTCACTAGGGAGT Reverse complement motif     Consensus sequence: ACTCCCTAGTGAGATGAACC


Dataset #: 1 Motif ID: 159 Motif name: Motif 159

Original motif     Consensus sequence: ACAGGCTTTGTGTGAGCA Reverse complement motif     Consensus sequence: TGCTCACACAAAGCCTGT

Best Matches for Motif ID 159 (Highest to Lowest)

Dataset #: 1
Motif ID: 144
Motif name: Motif 144
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 18
Similarity score: 0.104283

Alignment:
GGGCTCCCACAGTGCAGCGG
-TGCTCACACAAAGCCTGT-

Original motif     Consensus sequence: CCGCTGCACTGTGGGAGCCC Reverse complement motif     Consensus sequence: GGGCTCCCACAGTGCAGCGG


Dataset #: 1
Motif ID: 129
Motif name: Motif 129
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 18
Similarity score: 0.109531

Alignment:
AAGAGGTTTAATTGRCTCA
-ACAGGCTTTGTGTGAGCA

Original motif     Consensus sequence: AAGAGGTTTAATTGRCTCA Reverse complement motif     Consensus sequence: TGAGKCAATTAAACCTCTT


Dataset #: 1 Motif ID: 160 Motif name: Motif 160

Original motif     Consensus sequence: AAATTACCCAGTCTCAGGTA Reverse complement motif     Consensus sequence: TACCTGAGACTGGGTAATTT

Best Matches for Motif ID 160 (Highest to Lowest)

Dataset #: 1
Motif ID: 321
Motif name: Motif 321
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.115677

Alignment:
AAGCTCGAACTGGGTGGAGC
TACCTGAGACTGGGTAATTT

Original motif     Consensus sequence: AAGCTCGAACTGGGTGGAGC Reverse complement motif     Consensus sequence: GCTCCACCCAGTTCGAGCTT


Dataset #: 1
Motif ID: 171
Motif name: Motif 171
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 19
Similarity score: 0.573795

Alignment:
-ACTTTGGACTGTGGACTTTT
TACCTGAGACTGGGTAATTT-

Original motif     Consensus sequence: AAAAGTCCACAGTCCAAAGT Reverse complement motif     Consensus sequence: ACTTTGGACTGTGGACTTTT


Dataset #: 1 Motif ID: 161 Motif name: Motif 161

Original motif     Consensus sequence: GAGGAGGRGGAGGDGGV Reverse complement motif     Consensus sequence: VCCDCCTCCKCCTCCTC

Best Matches for Motif ID 161 (Highest to Lowest)

Dataset #: 1
Motif ID: 26
Motif name: Motif 26
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 17
Similarity score: 0.0527497

Alignment:
TMGGGAGGCTGAGGCAGGAG
--GAGGAGGRGGAGGDGGV-

Original motif     Consensus sequence: CTCCTGCCTCAGCCTCCCRA Reverse complement motif     Consensus sequence: TMGGGAGGCTGAGGCAGGAG


Dataset #: 1
Motif ID: 178
Motif name: Motif 178
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 17
Similarity score: 0.0591495

Alignment:
ATGTGGAGGTGGAAGACAGT
--GAGGAGGRGGAGGDGGV-

Original motif     Consensus sequence: ACTGTCTTCCACCTCCACAT Reverse complement motif     Consensus sequence: ATGTGGAGGTGGAAGACAGT


Dataset #: 1 Motif ID: 162 Motif name: Motif 162

Original motif     Consensus sequence: ATGGACCTTG Reverse complement motif     Consensus sequence: CAAGGTCCAT

Best Matches for Motif ID 162 (Highest to Lowest)

Dataset #: 1
Motif ID: 166
Motif name: Motif 166
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.0562526

Alignment:
AAGGGACATTKGAG
-ATGGACCTTG---

Original motif     Consensus sequence: AAGGGACATTKGAG Reverse complement motif     Consensus sequence: CTCRAATGTCCCTT


Dataset #: 1
Motif ID: 104
Motif name: Motif 104
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 9
Number of overlap: 10
Similarity score: 0.0574028

Alignment:
CTCCAGKTMCATCCATGTTG
--CAAGGTCCAT--------

Original motif     Consensus sequence: CAACATGGATGRARCTGGAG Reverse complement motif     Consensus sequence: CTCCAGKTMCATCCATGTTG


Dataset #: 1 Motif ID: 163 Motif name: Motif 163

Original motif     Consensus sequence: CCTCCGTGGGCTCC Reverse complement motif     Consensus sequence: GGAGCCCACGGAGG

Best Matches for Motif ID 163 (Highest to Lowest)

Dataset #: 1
Motif ID: 331
Motif name: Motif 331
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 14
Similarity score: 0.0750229

Alignment:
CCACCACAGCTCAAGGAGGC
-----GGAGCCCACGGAGG-

Original motif     Consensus sequence: CCACCACAGCTCAAGGAGGC Reverse complement motif     Consensus sequence: GCCTCCTTGAGCTGTGGTGG


Dataset #: 1
Motif ID: 144
Motif name: Motif 144
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 14
Similarity score: 0.0899923

Alignment:
GGGCTCCCACAGTGCAGCGG
-GGAGCCCACGGAGG-----

Original motif     Consensus sequence: CCGCTGCACTGTGGGAGCCC Reverse complement motif     Consensus sequence: GGGCTCCCACAGTGCAGCGG


Dataset #: 1 Motif ID: 164 Motif name: Motif 164

Original motif     Consensus sequence: AGCCCCGGTTCCCGCYCGC Reverse complement motif     Consensus sequence: GCGMGCGGGAACCGGGGCT

Best Matches for Motif ID 164 (Highest to Lowest)

Dataset #: 1
Motif ID: 165
Motif name: Motif 165
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 19
Similarity score: 0.102596

Alignment:
AGCTCMKCCTCCTGTCAGAT
AGCCCCGGTTCCCGCYCGC-

Original motif     Consensus sequence: ATCTGACAGGAGGYRGAGCT Reverse complement motif     Consensus sequence: AGCTCMKCCTCCTGTCAGAT


Dataset #: 1
Motif ID: 96
Motif name: Motif 96
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 0.111018

Alignment:
GGAGCCGGCTCCCTCAGCTT
-AGCCCCGGTTCCCGCYCGC

Original motif     Consensus sequence: AAGCTGAGGGAGCCGGCTCC Reverse complement motif     Consensus sequence: GGAGCCGGCTCCCTCAGCTT


Dataset #: 1 Motif ID: 165 Motif name: Motif 165

Original motif     Consensus sequence: ATCTGACAGGAGGYRGAGCT Reverse complement motif     Consensus sequence: AGCTCMKCCTCCTGTCAGAT

Best Matches for Motif ID 165 (Highest to Lowest)

Dataset #: 1
Motif ID: 321
Motif name: Motif 321
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 0.0925429

Alignment:
AAGCTCGAACTGGGTGGAGC-
-ATCTGACAGGAGGYRGAGCT

Original motif     Consensus sequence: AAGCTCGAACTGGGTGGAGC Reverse complement motif     Consensus sequence: GCTCCACCCAGTTCGAGCTT


Dataset #: 1
Motif ID: 164
Motif name: Motif 164
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 19
Similarity score: 0.10248

Alignment:
GCGMGCGGGAACCGGGGCT-
ATCTGACAGGAGGYRGAGCT

Original motif     Consensus sequence: AGCCCCGGTTCCCGCYCGC Reverse complement motif     Consensus sequence: GCGMGCGGGAACCGGGGCT


Dataset #: 1 Motif ID: 166 Motif name: Motif 166

Original motif     Consensus sequence: AAGGGACATTKGAG Reverse complement motif     Consensus sequence: CTCRAATGTCCCTT

Best Matches for Motif ID 166 (Highest to Lowest)

Dataset #: 1
Motif ID: 305
Motif name: Motif 305
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 14
Similarity score: 0.0470693

Alignment:
AATGACCAATTGAGAGC
AAGGGACATTKGAG---

Original motif     Consensus sequence: AATGACCAATTGAGAGC Reverse complement motif     Consensus sequence: GCTCTCAATTGGTCATT


Dataset #: 1
Motif ID: 329
Motif name: Motif 329
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 14
Similarity score: 0.0535951

Alignment:
GGGAGGGATATATTAGC
--AAGGGACATTKGAG-

Original motif     Consensus sequence: GGGAGGGATATATTAGC Reverse complement motif     Consensus sequence: GCTAATATATCCCTCCC


Dataset #: 1 Motif ID: 167 Motif name: Motif 167

Original motif     Consensus sequence: CCGCTCCTGTGC Reverse complement motif     Consensus sequence: GCACAGGAGCGG

Best Matches for Motif ID 167 (Highest to Lowest)

Dataset #: 1
Motif ID: 62
Motif name: Motif 62
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 12
Similarity score: 0.0721943

Alignment:
AGGAACAGCTCCRGTCTAC
-----CCGCTCCTGTGC--

Original motif     Consensus sequence: AGGAACAGCTCCRGTCTAC Reverse complement motif     Consensus sequence: GTAGACKGGAGCTGTTCCT


Dataset #: 1
Motif ID: 144
Motif name: Motif 144
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.0736876

Alignment:
CCGCTGCACTGTGGGAGCCC
CCGCTCCTGTGC--------

Original motif     Consensus sequence: CCGCTGCACTGTGGGAGCCC Reverse complement motif     Consensus sequence: GGGCTCCCACAGTGCAGCGG


Dataset #: 1 Motif ID: 168 Motif name: Motif 168

Original motif     Consensus sequence: AGGTATTTCTCCCACC Reverse complement motif     Consensus sequence: GGTGGGAGAAATACCT

Best Matches for Motif ID 168 (Highest to Lowest)

Dataset #: 1
Motif ID: 16
Motif name: Motif 16
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 16
Similarity score: 0.0930663

Alignment:
GAAAGGGAACTCCCTGACCC
---AGGTATTTCTCCCACC-

Original motif     Consensus sequence: GAAAGGGAACTCCCTGACCC Reverse complement motif     Consensus sequence: GGGTCAGGGAGTTCCCTTTC


Dataset #: 1
Motif ID: 235
Motif name: Motif 235
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 16
Similarity score: 0.0952107

Alignment:
TCCAAATGGGAGAAATTGGC
----GGTGGGAGAAATACCT

Original motif     Consensus sequence: TCCAAATGGGAGAAATTGGC Reverse complement motif     Consensus sequence: GCCAATTTCTCCCATTTGGA


Dataset #: 1 Motif ID: 169 Motif name: Motif 169

Original motif     Consensus sequence: CCCAAATCCTATAAAA Reverse complement motif     Consensus sequence: TTTTATAGGATTTGGG

Best Matches for Motif ID 169 (Highest to Lowest)

Dataset #: 1
Motif ID: 235
Motif name: Motif 235
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 16
Similarity score: 0.0869109

Alignment:
GCCAATTTCTCCCATTTGGA
----TTTTATAGGATTTGGG

Original motif     Consensus sequence: TCCAAATGGGAGAAATTGGC Reverse complement motif     Consensus sequence: GCCAATTTCTCCCATTTGGA


Dataset #: 1
Motif ID: 227
Motif name: Motif 227
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 16
Similarity score: 0.0879004

Alignment:
CCCAAATCTCATSTTGAAT
CCCAAATCCTATAAAA---

Original motif     Consensus sequence: CCCAAATCTCATSTTGAAT Reverse complement motif     Consensus sequence: ATTCAASATGAGATTTGGG


Dataset #: 1 Motif ID: 170 Motif name: Motif 170

Original motif     Consensus sequence: AATCAACCCTGGYRATCAAT Reverse complement motif     Consensus sequence: ATTGATMKCCAGGGTTGATT

Best Matches for Motif ID 170 (Highest to Lowest)

Dataset #: 1
Motif ID: 63
Motif name: Motif 63
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.0971686

Alignment:
AGTGAGAACATRYRRTRTTT
ATTGATMKCCAGGGTTGATT

Original motif     Consensus sequence: AGTGAGAACATRYRRTRTTT Reverse complement motif     Consensus sequence: AAAMAMMKMATGTTCTCACT


Dataset #: 1
Motif ID: 58
Motif name: Motif 58
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 19
Similarity score: 0.584752

Alignment:
-GAAHCAACCKAAKTGTCCAT
AATCAACCCTGGYRATCAAT-

Original motif     Consensus sequence: ATGGACAYTTRGGTTGHTTC Reverse complement motif     Consensus sequence: GAAHCAACCKAAKTGTCCAT


Dataset #: 1 Motif ID: 171 Motif name: Motif 171

Original motif     Consensus sequence: AAAAGTCCACAGTCCAAAGT Reverse complement motif     Consensus sequence: ACTTTGGACTGTGGACTTTT

Best Matches for Motif ID 171 (Highest to Lowest)

Dataset #: 1
Motif ID: 160
Motif name: Motif 160
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 0.0755123

Alignment:
TACCTGAGACTGGGTAATTT-
-ACTTTGGACTGTGGACTTTT

Original motif     Consensus sequence: AAATTACCCAGTCTCAGGTA Reverse complement motif     Consensus sequence: TACCTGAGACTGGGTAATTT


Dataset #: 1
Motif ID: 357
Motif name: Motif 357
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 0.0980025

Alignment:
TAATTTTATGTGTCAACTTG-
-ACTTTGGACTGTGGACTTTT

Original motif     Consensus sequence: CAAGTTGACACATAAAATTA Reverse complement motif     Consensus sequence: TAATTTTATGTGTCAACTTG


Dataset #: 1 Motif ID: 172 Motif name: Motif 172

Original motif     Consensus sequence: AGAAACAGAA Reverse complement motif     Consensus sequence: TTCTGTTTCT

Best Matches for Motif ID 172 (Highest to Lowest)

Dataset #: 1
Motif ID: 356
Motif name: Motif 356
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 8
Number of overlap: 10
Similarity score: 0.0394673

Alignment:
CAGTCTGTGTCTTTTAATT
--TTCTGTTTCT-------

Original motif     Consensus sequence: AATTAAAAGACACAGACTG Reverse complement motif     Consensus sequence: CAGTCTGTGTCTTTTAATT


Dataset #: 1
Motif ID: 145
Motif name: Motif 145
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 8
Number of overlap: 10
Similarity score: 0.0541669

Alignment:
GCCAGTCACAAAARGACAMA
---AGAAACAGAA-------

Original motif     Consensus sequence: GCCAGTCACAAAARGACAMA Reverse complement motif     Consensus sequence: TYTGTCMTTTTGTGACTGGC


Dataset #: 1 Motif ID: 173 Motif name: Motif 173

Original motif     Consensus sequence: AAGGAAACAA Reverse complement motif     Consensus sequence: TTGTTTCCTT

Best Matches for Motif ID 173 (Highest to Lowest)

Dataset #: 1
Motif ID: 234
Motif name: Motif 234
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 11
Number of overlap: 10
Similarity score: 0.043227

Alignment:
GTGTCKGGAGTTTGTTCCTT
----------TTGTTTCCTT

Original motif     Consensus sequence: AAGGAACAAACTCCRGACAC Reverse complement motif     Consensus sequence: GTGTCKGGAGTTTGTTCCTT


Dataset #: 1
Motif ID: 41
Motif name: Motif 41
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.0491703

Alignment:
TTTTTTTMTTT
-TTGTTTCCTT

Original motif     Consensus sequence: AAAYAAAAAAA Reverse complement motif     Consensus sequence: TTTTTTTMTTT


Dataset #: 1 Motif ID: 174 Motif name: Motif 174

Original motif     Consensus sequence: GGGGTGAVCAGAT Reverse complement motif     Consensus sequence: ATCTGVTCACCCC

Best Matches for Motif ID 174 (Highest to Lowest)

Dataset #: 1
Motif ID: 205
Motif name: Motif 205
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 13
Similarity score: 0.0735305

Alignment:
CATCTGGCAGCCCA
-ATCTGVTCACCCC

Original motif     Consensus sequence: CATCTGGCAGCCCA Reverse complement motif     Consensus sequence: TGGGCTGCCAGATG


Dataset #: 1
Motif ID: 320
Motif name: Motif 320
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 13
Similarity score: 0.0766821

Alignment:
CATCTGGAGCCCCA
-ATCTGVTCACCCC

Original motif     Consensus sequence: CATCTGGAGCCCCA Reverse complement motif     Consensus sequence: TGGGGCTCCAGATG


Dataset #: 1 Motif ID: 175 Motif name: Motif 175

Original motif     Consensus sequence: AGCTAGAYACAGAGTGC Reverse complement motif     Consensus sequence: GCACTCTGTMTCTAGCT

Best Matches for Motif ID 175 (Highest to Lowest)

Dataset #: 1
Motif ID: 109
Motif name: Motif 109
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 17
Similarity score: 0.0923803

Alignment:
TCTCTCTCTCTCTCTCTCTC
GCACTCTGTMTCTAGCT---

Original motif     Consensus sequence: GAGAGAGAGAGAGAGAGAGA Reverse complement motif     Consensus sequence: TCTCTCTCTCTCTCTCTCTC


Dataset #: 1
Motif ID: 349
Motif name: Motif 349
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 17
Similarity score: 0.0970004

Alignment:
AGAGCCAAATCATGARTGAA
--AGCTAGAYACAGAGTGC-

Original motif     Consensus sequence: AGAGCCAAATCATGARTGAA Reverse complement motif     Consensus sequence: TTCAMTCATGATTTGGCTCT


Dataset #: 1 Motif ID: 176 Motif name: Motif 176

Original motif     Consensus sequence: AGGCCCCAGTGTSTGTTGTT Reverse complement motif     Consensus sequence: AACAACASACACTGGGGCCT

Best Matches for Motif ID 176 (Highest to Lowest)

Dataset #: 1
Motif ID: 48
Motif name: Motif 48
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.100522

Alignment:
AGCTCCCAGCGTGAGCGACG
AGGCCCCAGTGTSTGTTGTT

Original motif     Consensus sequence: AGCTCCCAGCGTGAGCGACG Reverse complement motif     Consensus sequence: CGTCGCTCACGCTGGGAGCT


Dataset #: 1
Motif ID: 292
Motif name: Motif 292
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.103197

Alignment:
TTGTCCCACTGGAAGGTCTT
AGGCCCCAGTGTSTGTTGTT

Original motif     Consensus sequence: AAGACCTTCCAGTGGGACAA Reverse complement motif     Consensus sequence: TTGTCCCACTGGAAGGTCTT


Dataset #: 1 Motif ID: 177 Motif name: Motif 177

Original motif     Consensus sequence: CCCGAAGCTGCRYRCTCGGT Reverse complement motif     Consensus sequence: ACCGAGMKMGCAGCTTCGGG

Best Matches for Motif ID 177 (Highest to Lowest)

Dataset #: 1
Motif ID: 56
Motif name: Motif 56
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.0760829

Alignment:
CRTGAGCCACYGYRCCYGGC
CCCGAAGCTGCRYRCTCGGT

Original motif     Consensus sequence: CRTGAGCCACYGYRCCYGGC Reverse complement motif     Consensus sequence: GCCKGGMKCMGTGGCTCAKG


Dataset #: 1
Motif ID: 76
Motif name: Motif 76
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 0.590313

Alignment:
GTGCCAGGCACTGTKCTARG-
-CCCGAAGCTGCRYRCTCGGT

Original motif     Consensus sequence: GTGCCAGGCACTGTKCTARG Reverse complement motif     Consensus sequence: CMTAGYACAGTGCCTGGCAC


Dataset #: 1 Motif ID: 178 Motif name: Motif 178

Original motif     Consensus sequence: ACTGTCTTCCACCTCCACAT Reverse complement motif     Consensus sequence: ATGTGGAGGTGGAAGACAGT

Best Matches for Motif ID 178 (Highest to Lowest)

Dataset #: 1
Motif ID: 350
Motif name: Motif 350
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.101056

Alignment:
TGCTGGAGGTCCACTCCAGA
ATGTGGAGGTGGAAGACAGT

Original motif     Consensus sequence: TCTGGAGTGGACCTCCAGCA Reverse complement motif     Consensus sequence: TGCTGGAGGTCCACTCCAGA


Dataset #: 1
Motif ID: 292
Motif name: Motif 292
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.111286

Alignment:
TTGTCCCACTGGAAGGTCTT
ATGTGGAGGTGGAAGACAGT

Original motif     Consensus sequence: AAGACCTTCCAGTGGGACAA Reverse complement motif     Consensus sequence: TTGTCCCACTGGAAGGTCTT


Dataset #: 1 Motif ID: 179 Motif name: Motif 179

Original motif     Consensus sequence: AGGTCCTTCAGGAGGTATTC Reverse complement motif     Consensus sequence: GAATACCTCCTGAAGGACCT

Best Matches for Motif ID 179 (Highest to Lowest)

Dataset #: 1
Motif ID: 292
Motif name: Motif 292
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.0979569

Alignment:
TTGTCCCACTGGAAGGTCTT
GAATACCTCCTGAAGGACCT

Original motif     Consensus sequence: AAGACCTTCCAGTGGGACAA Reverse complement motif     Consensus sequence: TTGTCCCACTGGAAGGTCTT


Dataset #: 1
Motif ID: 332
Motif name: Motif 332
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.114535

Alignment:
CTGGCCCTCAATGGTTAAAC
AGGTCCTTCAGGAGGTATTC

Original motif     Consensus sequence: CTGGCCCTCAATGGTTAAAC Reverse complement motif     Consensus sequence: GTTTAACCATTGAGGGCCAG


Dataset #: 1 Motif ID: 180 Motif name: Motif 180

Original motif     Consensus sequence: TGCGCATGCGCA Reverse complement motif     Consensus sequence: TGCGCATGCGCA

Best Matches for Motif ID 180 (Highest to Lowest)

Dataset #: 1
Motif ID: 100
Motif name: Motif 100
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 12
Similarity score: 0.0728388

Alignment:
GCTGGCCCGCAAGCGCCGCG
---TGCGCATGCGCA-----

Original motif     Consensus sequence: GCTGGCCCGCAAGCGCCGCG Reverse complement motif     Consensus sequence: CGCGGCGCTTGCGGGCCAGC


Dataset #: 1
Motif ID: 306
Motif name: Motif 306
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 12
Similarity score: 0.0731846

Alignment:
GACATGAGCTGGCGCTTG
----TGCGCATGCGCA--

Original motif     Consensus sequence: GACATGAGCTGGCGCTTG Reverse complement motif     Consensus sequence: CAAGCGCCAGCTCATGTC


Dataset #: 1 Motif ID: 181 Motif name: Motif 181

Original motif     Consensus sequence: AAATGCAAAT Reverse complement motif     Consensus sequence: ATTTGCATTT

Best Matches for Motif ID 181 (Highest to Lowest)

Dataset #: 1
Motif ID: 322
Motif name: Motif 322
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 6
Number of overlap: 10
Similarity score: 0.0560732

Alignment:
AGGGCCTTTGCASWTGC
-----ATTTGCATTT--

Original motif     Consensus sequence: AGGGCCTTTGCASWTGC Reverse complement motif     Consensus sequence: GCAWSTGCAAAGGCCCT


Dataset #: 1
Motif ID: 25
Motif name: Motif 25
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.0591841

Alignment:
GTACCTCAGWTGGAAATG
-AAATGCAAAT-------

Original motif     Consensus sequence: CATTTCCAWCTGAGGTAC Reverse complement motif     Consensus sequence: GTACCTCAGWTGGAAATG


Dataset #: 1 Motif ID: 182 Motif name: Motif 182

Original motif     Consensus sequence: GACCAMGAACCCA Reverse complement motif     Consensus sequence: TGGGTTCYTGGTC

Best Matches for Motif ID 182 (Highest to Lowest)

Dataset #: 1
Motif ID: 68
Motif name: Motif 68
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 13
Similarity score: 0.0852314

Alignment:
GACCTGCAGCCCGCCATG
-----GACCAMGAACCCA

Original motif     Consensus sequence: CATGGCGGGCTGCAGGTC Reverse complement motif     Consensus sequence: GACCTGCAGCCCGCCATG


Dataset #: 1
Motif ID: 271
Motif name: Motif 271
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 13
Similarity score: 0.0870886

Alignment:
AGGGATCTAGGTTGCR
TGGGTTCYTGGTC---

Original motif     Consensus sequence: AGGGATCTAGGTTGCR Reverse complement motif     Consensus sequence: KGCAACCTAGATCCCT


Dataset #: 1 Motif ID: 183 Motif name: Motif 183

Original motif     Consensus sequence: GCCRGCCCTGCYGGCC Reverse complement motif     Consensus sequence: GGCCMGCAGGGCKGGC

Best Matches for Motif ID 183 (Highest to Lowest)

Dataset #: 1
Motif ID: 100
Motif name: Motif 100
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 16
Similarity score: 0.0673082

Alignment:
GCTGGCCCGCAAGCGCCGCG
-GGCCMGCAGGGCKGGC---

Original motif     Consensus sequence: GCTGGCCCGCAAGCGCCGCG Reverse complement motif     Consensus sequence: CGCGGCGCTTGCGGGCCAGC


Dataset #: 1
Motif ID: 52
Motif name: Motif 52
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 16
Similarity score: 0.0703996

Alignment:
GACTGGCAGGCAGCTCCACC
GGCCMGCAGGGCKGGC----

Original motif     Consensus sequence: GACTGGCAGGCAGCTCCACC Reverse complement motif     Consensus sequence: GGTGGAGCTGCCTGCCAGTC


Dataset #: 1 Motif ID: 184 Motif name: Motif 184

Original motif     Consensus sequence: ATATTGATGATCCTGACC Reverse complement motif     Consensus sequence: GGTCAGGATCATCAATAT

Best Matches for Motif ID 184 (Highest to Lowest)

Dataset #: 1
Motif ID: 254
Motif name: Motif 254
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 18
Similarity score: 0.08828

Alignment:
ATAGGAATGCTTGTGATTTT
ATATTGATGATCCTGACC--

Original motif     Consensus sequence: AAAATCACAAGCATTCCTAT Reverse complement motif     Consensus sequence: ATAGGAATGCTTGTGATTTT


Dataset #: 1
Motif ID: 16
Motif name: Motif 16
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 18
Similarity score: 0.0954042

Alignment:
GAAAGGGAACTCCCTGACCC
-ATATTGATGATCCTGACC-

Original motif     Consensus sequence: GAAAGGGAACTCCCTGACCC Reverse complement motif     Consensus sequence: GGGTCAGGGAGTTCCCTTTC


Dataset #: 1 Motif ID: 185 Motif name: Motif 185

Original motif     Consensus sequence: GAAGATGAMG Reverse complement motif     Consensus sequence: CYTCATCTTC

Best Matches for Motif ID 185 (Highest to Lowest)

Dataset #: 1
Motif ID: 161
Motif name: Motif 161
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 10
Similarity score: 0.038579

Alignment:
VCCDCCTCCKCCTCCTC
----CYTCATCTTC---

Original motif     Consensus sequence: GAGGAGGRGGAGGDGGV Reverse complement motif     Consensus sequence: VCCDCCTCCKCCTCCTC


Dataset #: 1
Motif ID: 26
Motif name: Motif 26
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 7
Number of overlap: 10
Similarity score: 0.0396628

Alignment:
TMGGGAGGCTGAGGCAGGAG
------GAAGATGAMG----

Original motif     Consensus sequence: CTCCTGCCTCAGCCTCCCRA Reverse complement motif     Consensus sequence: TMGGGAGGCTGAGGCAGGAG


Dataset #: 1 Motif ID: 186 Motif name: Motif 186

Original motif     Consensus sequence: AAATATTT Reverse complement motif     Consensus sequence: AAATATTT

Best Matches for Motif ID 186 (Highest to Lowest)

Dataset #: 1
Motif ID: 57
Motif name: Motif 57
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0174942

Alignment:
AATAAATATTT
AAATATTT---

Original motif     Consensus sequence: AAATATTTATT Reverse complement motif     Consensus sequence: AATAAATATTT


Dataset #: 1
Motif ID: 168
Motif name: Motif 168
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 9
Number of overlap: 8
Similarity score: 0.0532506

Alignment:
AGGTATTTCTCCCACC
AAATATTT--------

Original motif     Consensus sequence: AGGTATTTCTCCCACC Reverse complement motif     Consensus sequence: GGTGGGAGAAATACCT


Dataset #: 1 Motif ID: 187 Motif name: Motif 187

Original motif     Consensus sequence: TCTCTGAGCCTCAGTT Reverse complement motif     Consensus sequence: AACTGAGGCTCAGAGA

Best Matches for Motif ID 187 (Highest to Lowest)

Dataset #: 1
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 16
Similarity score: 0.0912831

Alignment:
ATCRCTTGAGSYCAGGAGKT
-AACTGAGGCTCAGAGA---

Original motif     Consensus sequence: ATCRCTTGAGSYCAGGAGKT Reverse complement motif     Consensus sequence: ARCTCCTGKSCTCAAGKGAT


Dataset #: 1
Motif ID: 26
Motif name: Motif 26
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 16
Similarity score: 0.0936416

Alignment:
TMGGGAGGCTGAGGCAGGAG
AACTGAGGCTCAGAGA----

Original motif     Consensus sequence: CTCCTGCCTCAGCCTCCCRA Reverse complement motif     Consensus sequence: TMGGGAGGCTGAGGCAGGAG


Dataset #: 1 Motif ID: 188 Motif name: Motif 188

Original motif     Consensus sequence: CTCCAGACACATC Reverse complement motif     Consensus sequence: GATGTGTCTGGAG

Best Matches for Motif ID 188 (Highest to Lowest)

Dataset #: 1
Motif ID: 105
Motif name: Motif 105
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 13
Similarity score: 0.0694148

Alignment:
GGAGGTGTGGAGGGAGAGGC
---GATGTGTCTGGAG----

Original motif     Consensus sequence: GCCTCTCCCTCCACACCTCC Reverse complement motif     Consensus sequence: GGAGGTGTGGAGGGAGAGGC


Dataset #: 1
Motif ID: 104
Motif name: Motif 104
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 8
Number of overlap: 13
Similarity score: 0.0708894

Alignment:
CAACATGGATGRARCTGGAG
GATGTGTCTGGAG-------

Original motif     Consensus sequence: CAACATGGATGRARCTGGAG Reverse complement motif     Consensus sequence: CTCCAGKTMCATCCATGTTG


Dataset #: 1 Motif ID: 189 Motif name: Motif 189

Original motif     Consensus sequence: ATCCAGTCTATCATTG Reverse complement motif     Consensus sequence: CAATGATAGACTGGAT

Best Matches for Motif ID 189 (Highest to Lowest)

Dataset #: 1
Motif ID: 349
Motif name: Motif 349
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 16
Similarity score: 0.0977739

Alignment:
TTCAMTCATGATTTGGCTCT
--CAATGATAGACTGGAT--

Original motif     Consensus sequence: AGAGCCAAATCATGARTGAA Reverse complement motif     Consensus sequence: TTCAMTCATGATTTGGCTCT


Dataset #: 1
Motif ID: 310
Motif name: Motif 310
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 16
Similarity score: 0.106334

Alignment:
CCCATGCAAGTCYRAAATCC
-CAATGATAGACTGGAT---

Original motif     Consensus sequence: CCCATGCAAGTCYRAAATCC Reverse complement motif     Consensus sequence: GGATTTMKGACTTGCATGGG


Dataset #: 1 Motif ID: 190 Motif name: Motif 190

Original motif     Consensus sequence: CAAAGGCATAAGAATGAT Reverse complement motif     Consensus sequence: ATCATTCTTATGCCTTTG

Best Matches for Motif ID 190 (Highest to Lowest)

Dataset #: 1
Motif ID: 194
Motif name: Motif 194
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 18
Similarity score: 0.0879984

Alignment:
CAAGGGTATAYGAGTAGCTG
CAAAGGCATAAGAATGAT--

Original motif     Consensus sequence: CAAGGGTATAYGAGTAGCTG Reverse complement motif     Consensus sequence: CAGCTACTCKTATACCCTTG


Dataset #: 1
Motif ID: 262
Motif name: Motif 262
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 18
Similarity score: 0.101423

Alignment:
CTCAGTGTTAATCTCCTGTC
ATCATTCTTATGCCTTTG--

Original motif     Consensus sequence: CTCAGTGTTAATCTCCTGTC Reverse complement motif     Consensus sequence: GACAGGAGATTAACACTGAG


Dataset #: 1 Motif ID: 191 Motif name: Motif 191

Original motif     Consensus sequence: AAAGTGCCGAGAKTGCAGC Reverse complement motif     Consensus sequence: GCTGCARTCTCGGCACTTT

Best Matches for Motif ID 191 (Highest to Lowest)

Dataset #: 1
Motif ID: 160
Motif name: Motif 160
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 0.105699

Alignment:
TACCTGAGACTGGGTAATTT
-GCTGCARTCTCGGCACTTT

Original motif     Consensus sequence: AAATTACCCAGTCTCAGGTA Reverse complement motif     Consensus sequence: TACCTGAGACTGGGTAATTT


Dataset #: 1
Motif ID: 171
Motif name: Motif 171
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 19
Similarity score: 0.106747

Alignment:
ACTTTGGACTGTGGACTTTT
GCTGCARTCTCGGCACTTT-

Original motif     Consensus sequence: AAAAGTCCACAGTCCAAAGT Reverse complement motif     Consensus sequence: ACTTTGGACTGTGGACTTTT


Dataset #: 1 Motif ID: 192 Motif name: Motif 192

Original motif     Consensus sequence: GAATCCTGGGACAGCCTGT Reverse complement motif     Consensus sequence: ACAGGCTGTCCCAGGATTC

Best Matches for Motif ID 192 (Highest to Lowest)

Dataset #: 1
Motif ID: 348
Motif name: Motif 348
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 19
Similarity score: 0.111729

Alignment:
CAAASCKGTCATAGGCCAT
GAATCCTGGGACAGCCTGT

Original motif     Consensus sequence: ATGGCCTATGACYGSTTTG Reverse complement motif     Consensus sequence: CAAASCKGTCATAGGCCAT


Dataset #: 1
Motif ID: 64
Motif name: Motif 64
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 19
Similarity score: 0.111948

Alignment:
GAAGGCAGCTAAGGCCCGGY
GAATCCTGGGACAGCCTGT-

Original motif     Consensus sequence: GAAGGCAGCTAAGGCCCGGY Reverse complement motif     Consensus sequence: KCCGGGCCTTAGCTGCCTTC


Dataset #: 1 Motif ID: 193 Motif name: Motif 193

Original motif     Consensus sequence: ATACAATGGGGGTACAGRC Reverse complement motif     Consensus sequence: GKCTGTACCCCCATTGTAT

Best Matches for Motif ID 193 (Highest to Lowest)

Dataset #: 1
Motif ID: 17
Motif name: Motif 17
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 19
Similarity score: 0.0903363

Alignment:
TGHCCTGCKCCCACTGTCT
GKCTGTACCCCCATTGTAT

Original motif     Consensus sequence: AGACAGTGGGYGCAGGHCA Reverse complement motif     Consensus sequence: TGHCCTGCKCCCACTGTCT


Dataset #: 1
Motif ID: 350
Motif name: Motif 350
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 19
Similarity score: 0.0979844

Alignment:
TGCTGGAGGTCCACTCCAGA
GKCTGTACCCCCATTGTAT-

Original motif     Consensus sequence: TCTGGAGTGGACCTCCAGCA Reverse complement motif     Consensus sequence: TGCTGGAGGTCCACTCCAGA


Dataset #: 1 Motif ID: 194 Motif name: Motif 194

Original motif     Consensus sequence: CAAGGGTATAYGAGTAGCTG Reverse complement motif     Consensus sequence: CAGCTACTCKTATACCCTTG

Best Matches for Motif ID 194 (Highest to Lowest)

Dataset #: 1
Motif ID: 108
Motif name: Motif 108
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.111361

Alignment:
GCGCTCKTCGGGGAGGCTCG
CAGCTACTCKTATACCCTTG

Original motif     Consensus sequence: CGAGCCTCCCCGAYGAGCGC Reverse complement motif     Consensus sequence: GCGCTCKTCGGGGAGGCTCG


Dataset #: 1
Motif ID: 58
Motif name: Motif 58
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 19
Similarity score: 0.608266

Alignment:
-ATGGACAYTTRGGTTGHTTC
CAAGGGTATAYGAGTAGCTG-

Original motif     Consensus sequence: ATGGACAYTTRGGTTGHTTC Reverse complement motif     Consensus sequence: GAAHCAACCKAAKTGTCCAT


Dataset #: 1 Motif ID: 195 Motif name: Motif 195

Original motif     Consensus sequence: TAAAAGACTACAWATTGGGT Reverse complement motif     Consensus sequence: ACCCAATWTGTAGTCTTTTA

Best Matches for Motif ID 195 (Highest to Lowest)

Dataset #: 1
Motif ID: 235
Motif name: Motif 235
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 19
Similarity score: 0.093741

Alignment:
-GCCAATTTCTCCCATTTGGA
ACCCAATWTGTAGTCTTTTA-

Original motif     Consensus sequence: TCCAAATGGGAGAAATTGGC Reverse complement motif     Consensus sequence: GCCAATTTCTCCCATTTGGA


Dataset #: 1
Motif ID: 18
Motif name: Motif 18
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 19
Similarity score: 0.0994352

Alignment:
-CCCYAATACTGCGCTTTTC
ACCCAATWTGTAGTCTTTTA

Original motif     Consensus sequence: GAAAAGCGCAGTATTMGGG Reverse complement motif     Consensus sequence: CCCYAATACTGCGCTTTTC


Dataset #: 1 Motif ID: 196 Motif name: Motif 196

Original motif     Consensus sequence: CCTGCCATTGCYSAGGCTTG Reverse complement motif     Consensus sequence: CAAGCCTSKGCAATGGCAGG

Best Matches for Motif ID 196 (Highest to Lowest)

Dataset #: 1
Motif ID: 108
Motif name: Motif 108
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.113175

Alignment:
GCGCTCKTCGGGGAGGCTCG
CCTGCCATTGCYSAGGCTTG

Original motif     Consensus sequence: CGAGCCTCCCCGAYGAGCGC Reverse complement motif     Consensus sequence: GCGCTCKTCGGGGAGGCTCG


Dataset #: 1
Motif ID: 292
Motif name: Motif 292
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 19
Similarity score: 0.612012

Alignment:
-AAGACCTTCCAGTGGGACAA
CAAGCCTSKGCAATGGCAGG-

Original motif     Consensus sequence: AAGACCTTCCAGTGGGACAA Reverse complement motif     Consensus sequence: TTGTCCCACTGGAAGGTCTT


Dataset #: 1 Motif ID: 197 Motif name: Motif 197

Original motif     Consensus sequence: CGCCCGGCCAGC Reverse complement motif     Consensus sequence: GCTGGCCGGGCG

Best Matches for Motif ID 197 (Highest to Lowest)

Dataset #: 1
Motif ID: 125
Motif name: Motif 125
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.0154405

Alignment:
CGCCCGGCCAGCCGC
CGCCCGGCCAGC---

Original motif     Consensus sequence: CGCCCGGCCAGCCGC Reverse complement motif     Consensus sequence: GCGGCTGGCCGGGCG


Dataset #: 1
Motif ID: 42
Motif name: Motif 42
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 12
Similarity score: 0.0710698

Alignment:
CTCTGCCCGGCCGC
-GCTGGCCGGGCG-

Original motif     Consensus sequence: CTCTGCCCGGCCGC Reverse complement motif     Consensus sequence: GCGGCCGGGCAGAG


Dataset #: 1 Motif ID: 198 Motif name: Motif 198

Original motif     Consensus sequence: AGGGMAGGGA Reverse complement motif     Consensus sequence: TCCCTRCCCT

Best Matches for Motif ID 198 (Highest to Lowest)

Dataset #: 1
Motif ID: 78
Motif name: Motif 78
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 10
Similarity score: 0.0499279

Alignment:
CGAGCCCTGCCCCGCGG
----TCCCTRCCCT---

Original motif     Consensus sequence: CGAGCCCTGCCCCGCGG Reverse complement motif     Consensus sequence: CCGCGGGGCAGGGCTCG


Dataset #: 1
Motif ID: 16
Motif name: Motif 16
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0554968

Alignment:
GAAAGGGAACTCCCTGACCC
TCCCTRCCCT----------

Original motif     Consensus sequence: GAAAGGGAACTCCCTGACCC Reverse complement motif     Consensus sequence: GGGTCAGGGAGTTCCCTTTC


Dataset #: 1 Motif ID: 199 Motif name: Motif 199

Original motif     Consensus sequence: ACAGCTGGCACC Reverse complement motif     Consensus sequence: GGTGCCAGCTGT

Best Matches for Motif ID 199 (Highest to Lowest)

Dataset #: 1
Motif ID: 49
Motif name: Motif 49
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.0585218

Alignment:
ACATCTGYMMCC
ACAGCTGGCACC

Original motif     Consensus sequence: ACATCTGYMMCC Reverse complement motif     Consensus sequence: GGRRMCAGATGT


Dataset #: 1
Motif ID: 1
Motif name: Motif 1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.0698583

Alignment:
BCVTCTGTCACCCC
--ACAGCTGGCACC

Original motif     Consensus sequence: GGGGTGACAGABGB Reverse complement motif     Consensus sequence: BCVTCTGTCACCCC


Dataset #: 1 Motif ID: 200 Motif name: Motif 200

Original motif     Consensus sequence: ACCCCGTCTGGGA Reverse complement motif     Consensus sequence: TCCCAGACGGGGT

Best Matches for Motif ID 200 (Highest to Lowest)

Dataset #: 1
Motif ID: 95
Motif name: Motif 95
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 13
Similarity score: 0.0106929

Alignment:
ACCCYGTCTGGGAGGTG
ACCCCGTCTGGGA----

Original motif     Consensus sequence: ACCCYGTCTGGGAGGTG Reverse complement motif     Consensus sequence: CACCTCCCAGACMGGGT


Dataset #: 1
Motif ID: 27
Motif name: Motif 27
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 13
Similarity score: 0.0207173

Alignment:
CGCCCCGTCTGGGAAGTG
----ACCCCGTCTGGGA-

Original motif     Consensus sequence: CACTTCCCAGACGGGGCG Reverse complement motif     Consensus sequence: CGCCCCGTCTGGGAAGTG


Dataset #: 1 Motif ID: 201 Motif name: Motif 201

Original motif     Consensus sequence: GTAACACTCACCGCGARGGT Reverse complement motif     Consensus sequence: ACCKTCGCGGTGAGTGTTAC

Best Matches for Motif ID 201 (Highest to Lowest)

Dataset #: 1
Motif ID: 294
Motif name: Motif 294
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.11338

Alignment:
GTGGCCCTCTTCTCACAGCT
GTAACACTCACCGCGARGGT

Original motif     Consensus sequence: AGCTGTGAGAAGAGGGCCAC Reverse complement motif     Consensus sequence: GTGGCCCTCTTCTCACAGCT


Dataset #: 1
Motif ID: 321
Motif name: Motif 321
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.114848

Alignment:
GCTCCACCCAGTTCGAGCTT
GTAACACTCACCGCGARGGT

Original motif     Consensus sequence: AAGCTCGAACTGGGTGGAGC Reverse complement motif     Consensus sequence: GCTCCACCCAGTTCGAGCTT


Dataset #: 1 Motif ID: 202 Motif name: Motif 202

Original motif     Consensus sequence: ACACATCACAAAGCAGTTTC Reverse complement motif     Consensus sequence: GAAACTGCTTTGTGATGTGT

Best Matches for Motif ID 202 (Highest to Lowest)

Dataset #: 1
Motif ID: 61
Motif name: Motif 61
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.117486

Alignment:
GGATCCACTGGGTGAAGCCA
GAAACTGCTTTGTGATGTGT

Original motif     Consensus sequence: GGATCCACTGGGTGAAGCCA Reverse complement motif     Consensus sequence: TGGCTTCACCCAGTGGATCC


Dataset #: 1
Motif ID: 176
Motif name: Motif 176
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 19
Similarity score: 0.607495

Alignment:
-AGGCCCCAGTGTSTGTTGTT
GAAACTGCTTTGTGATGTGT-

Original motif     Consensus sequence: AGGCCCCAGTGTSTGTTGTT Reverse complement motif     Consensus sequence: AACAACASACACTGGGGCCT


Dataset #: 1 Motif ID: 203 Motif name: Motif 203

Original motif     Consensus sequence: CCATGGCGTCC Reverse complement motif     Consensus sequence: GGACGCCATGG

Best Matches for Motif ID 203 (Highest to Lowest)

Dataset #: 1
Motif ID: 120
Motif name: Motif 120
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.0640975

Alignment:
GGGASCACATGG
-GGACGCCATGG

Original motif     Consensus sequence: CCATGTGSTCCC Reverse complement motif     Consensus sequence: GGGASCACATGG


Dataset #: 1
Motif ID: 312
Motif name: Motif 312
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 9
Number of overlap: 11
Similarity score: 0.0662761

Alignment:
CCCMKGGCACCCTCAGTCCT
-CCATGGCGTCC--------

Original motif     Consensus sequence: AGGACTGAGGGTGCCYRGGG Reverse complement motif     Consensus sequence: CCCMKGGCACCCTCAGTCCT


Dataset #: 1 Motif ID: 204 Motif name: Motif 204

Original motif     Consensus sequence: AGAGYRAGACTCC Reverse complement motif     Consensus sequence: GGAGTCTMKCTCT

Best Matches for Motif ID 204 (Highest to Lowest)

Dataset #: 1
Motif ID: 253
Motif name: Motif 253
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 13
Similarity score: 0.0513045

Alignment:
ACAGAGTGAGACTCT
--AGAGYRAGACTCC

Original motif     Consensus sequence: AGAGTCTCACTCTGT Reverse complement motif     Consensus sequence: ACAGAGTGAGACTCT


Dataset #: 1
Motif ID: 262
Motif name: Motif 262
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 13
Similarity score: 0.0874128

Alignment:
CTCAGTGTTAATCTCCTGTC
---AGAGYRAGACTCC----

Original motif     Consensus sequence: CTCAGTGTTAATCTCCTGTC Reverse complement motif     Consensus sequence: GACAGGAGATTAACACTGAG


Dataset #: 1 Motif ID: 205 Motif name: Motif 205

Original motif     Consensus sequence: CATCTGGCAGCCCA Reverse complement motif     Consensus sequence: TGGGCTGCCAGATG

Best Matches for Motif ID 205 (Highest to Lowest)

Dataset #: 1
Motif ID: 284
Motif name: Motif 284
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 14
Similarity score: 0.036398

Alignment:
CATTTGGGAGCCCATTGA
CATCTGGCAGCCCA----

Original motif     Consensus sequence: CATTTGGGAGCCCATTGA Reverse complement motif     Consensus sequence: TCAATGGGCTCCCAAATG


Dataset #: 1
Motif ID: 320
Motif name: Motif 320
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0491079

Alignment:
CATCTGGAGCCCCA
CATCTGGCAGCCCA

Original motif     Consensus sequence: CATCTGGAGCCCCA Reverse complement motif     Consensus sequence: TGGGGCTCCAGATG


Dataset #: 1 Motif ID: 206 Motif name: Motif 206

Original motif     Consensus sequence: GCTCCWGTGYGKCC Reverse complement motif     Consensus sequence: GGRCKCACWGGAGC

Best Matches for Motif ID 206 (Highest to Lowest)

Dataset #: 1
Motif ID: 215
Motif name: Motif 215
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 14
Similarity score: 0.038263

Alignment:
GGGRSCACAGGAGCD
GGRCKCACWGGAGC-

Original motif     Consensus sequence: HGCTCCTGTGSKCCC Reverse complement motif     Consensus sequence: GGGRSCACAGGAGCD


Dataset #: 1
Motif ID: 67
Motif name: Motif 67
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 14
Similarity score: 0.0894523

Alignment:
CTGGGCTCCTGAGTCTGGTG
----GCTCCWGTGYGKCC--

Original motif     Consensus sequence: CTGGGCTCCTGAGTCTGGTG Reverse complement motif     Consensus sequence: CACCAGACTCAGGAGCCCAG


Dataset #: 1 Motif ID: 207 Motif name: Motif 207

Original motif     Consensus sequence: GACCTTGA Reverse complement motif     Consensus sequence: TCAAGGTC

Best Matches for Motif ID 207 (Highest to Lowest)

Dataset #: 1
Motif ID: 11
Motif name: Motif 11
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0145765

Alignment:
CTCAAGGTCCA
--TCAAGGTC-

Original motif     Consensus sequence: CTCAAGGTCCA Reverse complement motif     Consensus sequence: TGGACCTTGAG


Dataset #: 1
Motif ID: 264
Motif name: Motif 264
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0364604

Alignment:
TGTGACCTTGG
---GACCTTGA

Original motif     Consensus sequence: CCAAGGTCACA Reverse complement motif     Consensus sequence: TGTGACCTTGG


Dataset #: 1 Motif ID: 208 Motif name: Motif 208

Original motif     Consensus sequence: GTGAGGGCGAT Reverse complement motif     Consensus sequence: ATCGCCCTCAC

Best Matches for Motif ID 208 (Highest to Lowest)

Dataset #: 1
Motif ID: 329
Motif name: Motif 329
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0622115

Alignment:
GCTAATATATCCCTCCC
------ATCGCCCTCAC

Original motif     Consensus sequence: GGGAGGGATATATTAGC Reverse complement motif     Consensus sequence: GCTAATATATCCCTCCC


Dataset #: 1
Motif ID: 332
Motif name: Motif 332
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 10
Number of overlap: 11
Similarity score: 0.0654927

Alignment:
GTTTAACCATTGAGGGCCAG
---------GTGAGGGCGAT

Original motif     Consensus sequence: CTGGCCCTCAATGGTTAAAC Reverse complement motif     Consensus sequence: GTTTAACCATTGAGGGCCAG


Dataset #: 1 Motif ID: 209 Motif name: Motif 209

Original motif     Consensus sequence: CTGTCAGCCCAT Reverse complement motif     Consensus sequence: ATGGGCTGACAG

Best Matches for Motif ID 209 (Highest to Lowest)

Dataset #: 1
Motif ID: 284
Motif name: Motif 284
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 12
Similarity score: 0.0568336

Alignment:
CATTTGGGAGCCCATTGA
---CTGTCAGCCCAT---

Original motif     Consensus sequence: CATTTGGGAGCCCATTGA Reverse complement motif     Consensus sequence: TCAATGGGCTCCCAAATG


Dataset #: 1
Motif ID: 193
Motif name: Motif 193
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 6
Number of overlap: 12
Similarity score: 0.0594073

Alignment:
GKCTGTACCCCCATTGTAT
-----CTGTCAGCCCAT--

Original motif     Consensus sequence: ATACAATGGGGGTACAGRC Reverse complement motif     Consensus sequence: GKCTGTACCCCCATTGTAT


Dataset #: 1 Motif ID: 210 Motif name: Motif 210

Original motif     Consensus sequence: CTCGGATGGTAA Reverse complement motif     Consensus sequence: TTACCATCCGAG

Best Matches for Motif ID 210 (Highest to Lowest)

Dataset #: 1
Motif ID: 25
Motif name: Motif 25
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 12
Similarity score: 0.0447432

Alignment:
CATTTCCAWCTGAGGTAC
----TTACCATCCGAG--

Original motif     Consensus sequence: CATTTCCAWCTGAGGTAC Reverse complement motif     Consensus sequence: GTACCTCAGWTGGAAATG


Dataset #: 1
Motif ID: 82
Motif name: Motif 82
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 12
Similarity score: 0.0679752

Alignment:
GCTTAGCACCYGGGCCAGC
-----TTACCATCCGAG--

Original motif     Consensus sequence: GCTTAGCACCYGGGCCAGC Reverse complement motif     Consensus sequence: GCTGGCCCKGGTGCTAAGC


Dataset #: 1 Motif ID: 211 Motif name: Motif 211

Original motif     Consensus sequence: GACTTCAAGAATGAAGCCG Reverse complement motif     Consensus sequence: CGGCTTCATTCTTGAAGTC

Best Matches for Motif ID 211 (Highest to Lowest)

Dataset #: 1
Motif ID: 144
Motif name: Motif 144
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 0.0872886

Alignment:
CCGCTGCACTGTGGGAGCCC
-CGGCTTCATTCTTGAAGTC

Original motif     Consensus sequence: CCGCTGCACTGTGGGAGCCC Reverse complement motif     Consensus sequence: GGGCTCCCACAGTGCAGCGG


Dataset #: 1
Motif ID: 61
Motif name: Motif 61
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 0.109235

Alignment:
GGATCCACTGGGTGAAGCCA
-GACTTCAAGAATGAAGCCG

Original motif     Consensus sequence: GGATCCACTGGGTGAAGCCA Reverse complement motif     Consensus sequence: TGGCTTCACCCAGTGGATCC


Dataset #: 1 Motif ID: 212 Motif name: Motif 212

Original motif     Consensus sequence: TAGGGTAGTCAAR Reverse complement motif     Consensus sequence: MTTGACTACCCTA

Best Matches for Motif ID 212 (Highest to Lowest)

Dataset #: 1
Motif ID: 53
Motif name: Motif 53
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 6
Number of overlap: 13
Similarity score: 0.0571978

Alignment:
CTTGGGTGGTCGATGGGAC
-----TAGGGTAGTCAAR-

Original motif     Consensus sequence: GTCCCATCGACCACCCAAG Reverse complement motif     Consensus sequence: CTTGGGTGGTCGATGGGAC


Dataset #: 1
Motif ID: 194
Motif name: Motif 194
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 13
Similarity score: 0.0722477

Alignment:
CAAGGGTATAYGAGTAGCTG
-TAGGGTAGTCAAR------

Original motif     Consensus sequence: CAAGGGTATAYGAGTAGCTG Reverse complement motif     Consensus sequence: CAGCTACTCKTATACCCTTG


Dataset #: 1 Motif ID: 213 Motif name: Motif 213

Original motif     Consensus sequence: AAYRGACTAATACA Reverse complement motif     Consensus sequence: TGTATTAGTCMMTT

Best Matches for Motif ID 213 (Highest to Lowest)

Dataset #: 1
Motif ID: 262
Motif name: Motif 262
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 14
Similarity score: 0.0676805

Alignment:
CTCAGTGTTAATCTCCTGTC
---TGTATTAGTCMMTT---

Original motif     Consensus sequence: CTCAGTGTTAATCTCCTGTC Reverse complement motif     Consensus sequence: GACAGGAGATTAACACTGAG


Dataset #: 1
Motif ID: 29
Motif name: Motif 29
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 7
Number of overlap: 14
Similarity score: 0.0742206

Alignment:
CTGGGCRACAGAGYRAGACY
------AAYRGACTAATACA

Original motif     Consensus sequence: CTGGGCRACAGAGYRAGACY Reverse complement motif     Consensus sequence: MGTCTMKCTCTGTKGCCCAG


Dataset #: 1 Motif ID: 214 Motif name: Motif 214

Original motif     Consensus sequence: CTCAGGAATGGAAAACC Reverse complement motif     Consensus sequence: GGTTTTCCATTCCTGAG

Best Matches for Motif ID 214 (Highest to Lowest)

Dataset #: 1
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 17
Similarity score: 0.10823

Alignment:
TTTYTWTTTTTTYTWGAGAC
-GGTTTTCCATTCCTGAG--

Original motif     Consensus sequence: GTCTCWAMAAAAAAWAMAAA Reverse complement motif     Consensus sequence: TTTYTWTTTTTTYTWGAGAC


Dataset #: 1
Motif ID: 291
Motif name: Motif 291
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 17
Similarity score: 0.109842

Alignment:
TAMGACCTCAGGTCCTCAG
--GGTTTTCCATTCCTGAG

Original motif     Consensus sequence: CTGAGGACCTGAGGTCRTA Reverse complement motif     Consensus sequence: TAMGACCTCAGGTCCTCAG


Dataset #: 1 Motif ID: 215 Motif name: Motif 215

Original motif     Consensus sequence: HGCTCCTGTGSKCCC Reverse complement motif     Consensus sequence: GGGRSCACAGGAGCD

Best Matches for Motif ID 215 (Highest to Lowest)

Dataset #: 1
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 6
Number of overlap: 15
Similarity score: 0.0619315

Alignment:
ATCRCTTGAGSYCAGGAGKT
GGGRSCACAGGAGCD-----

Original motif     Consensus sequence: ATCRCTTGAGSYCAGGAGKT Reverse complement motif     Consensus sequence: ARCTCCTGKSCTCAAGKGAT


Dataset #: 1
Motif ID: 84
Motif name: Motif 84
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 15
Similarity score: 0.0736896

Alignment:
CTGGGTCCCCCAGCAGTGCC
--GGGRSCACAGGAGCD---

Original motif     Consensus sequence: CTGGGTCCCCCAGCAGTGCC Reverse complement motif     Consensus sequence: GGCACTGCTGGGGGACCCAG


Dataset #: 1 Motif ID: 216 Motif name: Motif 216

Original motif     Consensus sequence: CAGAAATCACC Reverse complement motif     Consensus sequence: GGTGATTTCTG

Best Matches for Motif ID 216 (Highest to Lowest)

Dataset #: 1
Motif ID: 35
Motif name: Motif 35
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 7
Number of overlap: 11
Similarity score: 0.0137887

Alignment:
CAGAAATCACCCGTCTT
CAGAAATCACC------

Original motif     Consensus sequence: CAGAAATCACCCGTCTT Reverse complement motif     Consensus sequence: AAGACGGGTGATTTCTG


Dataset #: 1
Motif ID: 261
Motif name: Motif 261
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 11
Similarity score: 0.0239476

Alignment:
TAGTGGTGATTTSTGAGAT
----GGTGATTTCTG----

Original motif     Consensus sequence: ATCTCASAAATCACCACTA Reverse complement motif     Consensus sequence: TAGTGGTGATTTSTGAGAT


Dataset #: 1 Motif ID: 217 Motif name: Motif 217

Original motif     Consensus sequence: CCCTACTGTTCTCY Reverse complement motif     Consensus sequence: KGAGAACAGTAGGG

Best Matches for Motif ID 217 (Highest to Lowest)

Dataset #: 1
Motif ID: 63
Motif name: Motif 63
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 14
Similarity score: 0.0624984

Alignment:
AGTGAGAACATRYRRTRTTT
----KGAGAACAGTAGGG--

Original motif     Consensus sequence: AGTGAGAACATRYRRTRTTT Reverse complement motif     Consensus sequence: AAAMAMMKMATGTTCTCACT


Dataset #: 1
Motif ID: 242
Motif name: Motif 242
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 14
Similarity score: 0.070491

Alignment:
CMCAGTTCACAATAGGGTT
---KGAGAACAGTAGGG--

Original motif     Consensus sequence: AACCCTATTGTGAACTGYG Reverse complement motif     Consensus sequence: CMCAGTTCACAATAGGGTT


Dataset #: 1 Motif ID: 218 Motif name: Motif 218

Original motif     Consensus sequence: AAGTWACTT Reverse complement motif     Consensus sequence: AAGTWACTT

Best Matches for Motif ID 218 (Highest to Lowest)

Dataset #: 1
Motif ID: 327
Motif name: Motif 327
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 7
Number of overlap: 9
Similarity score: 0.0387296

Alignment:
GAAATTGACTTCCTCCT
--AAGTWACTT------

Original motif     Consensus sequence: AGGAGGAAGTCAATTTC Reverse complement motif     Consensus sequence: GAAATTGACTTCCTCCT


Dataset #: 1
Motif ID: 231
Motif name: Motif 231
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 8
Number of overlap: 9
Similarity score: 0.0394637

Alignment:
MGAAGGGACTTGCCTTGT
--AAGTWACTT-------

Original motif     Consensus sequence: ACAAGGCAAGTCCCTTCY Reverse complement motif     Consensus sequence: MGAAGGGACTTGCCTTGT


Dataset #: 1 Motif ID: 219 Motif name: Motif 219

Original motif     Consensus sequence: CTGCAGCCTC Reverse complement motif     Consensus sequence: GAGGCTGCAG

Best Matches for Motif ID 219 (Highest to Lowest)

Dataset #: 1
Motif ID: 68
Motif name: Motif 68
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 6
Number of overlap: 10
Similarity score: 0.0362773

Alignment:
GACCTGCAGCCCGCCATG
-----CTGCAGCCTC---

Original motif     Consensus sequence: CATGGCGGGCTGCAGGTC Reverse complement motif     Consensus sequence: GACCTGCAGCCCGCCATG


Dataset #: 1
Motif ID: 220
Motif name: Motif 220
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0471481

Alignment:
GTGGGTGCAGTGCA
GAGGCTGCAG----

Original motif     Consensus sequence: TGCACTGCACCCAC Reverse complement motif     Consensus sequence: GTGGGTGCAGTGCA


Dataset #: 1 Motif ID: 220 Motif name: Motif 220

Original motif     Consensus sequence: TGCACTGCACCCAC Reverse complement motif     Consensus sequence: GTGGGTGCAGTGCA

Best Matches for Motif ID 220 (Highest to Lowest)

Dataset #: 1
Motif ID: 17
Motif name: Motif 17
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0478061

Alignment:
TGHCCTGCKCCCACTGTCT
-----TGCACTGCACCCAC

Original motif     Consensus sequence: AGACAGTGGGYGCAGGHCA Reverse complement motif     Consensus sequence: TGHCCTGCKCCCACTGTCT


Dataset #: 1
Motif ID: 289
Motif name: Motif 289
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 14
Similarity score: 0.0840846

Alignment:
TTTGGTGCACCCATCA
TGCACTGCACCCAC--

Original motif     Consensus sequence: TGATGGGTGCACCAAA Reverse complement motif     Consensus sequence: TTTGGTGCACCCATCA


Dataset #: 1 Motif ID: 221 Motif name: Motif 221

Original motif     Consensus sequence: GGGAGGAAGGGGACAC Reverse complement motif     Consensus sequence: GTGTCCCCTTCCTCCC

Best Matches for Motif ID 221 (Highest to Lowest)

Dataset #: 1
Motif ID: 294
Motif name: Motif 294
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 5
Number of overlap: 16
Similarity score: 0.0830942

Alignment:
GTGGCCCTCTTCTCACAGCT
GTGTCCCCTTCCTCCC----

Original motif     Consensus sequence: AGCTGTGAGAAGAGGGCCAC Reverse complement motif     Consensus sequence: GTGGCCCTCTTCTCACAGCT


Dataset #: 1
Motif ID: 178
Motif name: Motif 178
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 16
Similarity score: 0.0878739

Alignment:
ATGTGGAGGTGGAAGACAGT
-GGGAGGAAGGGGACAC---

Original motif     Consensus sequence: ACTGTCTTCCACCTCCACAT Reverse complement motif     Consensus sequence: ATGTGGAGGTGGAAGACAGT


Dataset #: 1 Motif ID: 222 Motif name: Motif 222

Original motif     Consensus sequence: CGAGATCACGCCA Reverse complement motif     Consensus sequence: TGGCGTGATCTCG

Best Matches for Motif ID 222 (Highest to Lowest)

Dataset #: 1
Motif ID: 61
Motif name: Motif 61
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 8
Number of overlap: 13
Similarity score: 0.0800547

Alignment:
GGATCCACTGGGTGAAGCCA
-------CGAGATCACGCCA

Original motif     Consensus sequence: GGATCCACTGGGTGAAGCCA Reverse complement motif     Consensus sequence: TGGCTTCACCCAGTGGATCC


Dataset #: 1
Motif ID: 99
Motif name: Motif 99
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 6
Number of overlap: 13
Similarity score: 0.0816199

Alignment:
AATGAKATCATGTCYTTTGC
-----CGAGATCACGCCA--

Original motif     Consensus sequence: GCAAAKGACATGATYTCATT Reverse complement motif     Consensus sequence: AATGAKATCATGTCYTTTGC


Dataset #: 1 Motif ID: 223 Motif name: Motif 223

Original motif     Consensus sequence: AGCCTCCYGAGTA Reverse complement motif     Consensus sequence: TACTCMGGAGGCT

Best Matches for Motif ID 223 (Highest to Lowest)

Dataset #: 1
Motif ID: 232
Motif name: Motif 232
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 13
Similarity score: 0.0672113

Alignment:
AAGTCTCCCAATTACAACT
-AGCCTCCYGAGTA-----

Original motif     Consensus sequence: AGTTGTAATTGGGAGACTT Reverse complement motif     Consensus sequence: AAGTCTCCCAATTACAACT


Dataset #: 1
Motif ID: 67
Motif name: Motif 67
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 13
Similarity score: 0.075298

Alignment:
CTGGGCTCCTGAGTCTGGTG
--AGCCTCCYGAGTA-----

Original motif     Consensus sequence: CTGGGCTCCTGAGTCTGGTG Reverse complement motif     Consensus sequence: CACCAGACTCAGGAGCCCAG


Dataset #: 1 Motif ID: 224 Motif name: Motif 224

Original motif     Consensus sequence: AATGAGTTAAGACTTTG Reverse complement motif     Consensus sequence: CAAAGTCTTAACTCATT

Best Matches for Motif ID 224 (Highest to Lowest)

Dataset #: 1
Motif ID: 190
Motif name: Motif 190
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 17
Similarity score: 0.10346

Alignment:
ATCATTCTTATGCCTTTG
CAAAGTCTTAACTCATT-

Original motif     Consensus sequence: CAAAGGCATAAGAATGAT Reverse complement motif     Consensus sequence: ATCATTCTTATGCCTTTG


Dataset #: 1
Motif ID: 129
Motif name: Motif 129
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 17
Similarity score: 0.103511

Alignment:
TGAGKCAATTAAACCTCTT
AATGAGTTAAGACTTTG--

Original motif     Consensus sequence: AAGAGGTTTAATTGRCTCA Reverse complement motif     Consensus sequence: TGAGKCAATTAAACCTCTT


Dataset #: 1 Motif ID: 225 Motif name: Motif 225

Original motif     Consensus sequence: GCACATGTAYCCYAGAACTT Reverse complement motif     Consensus sequence: AAGTTCTKGGKTACATGTGC

Best Matches for Motif ID 225 (Highest to Lowest)

Dataset #: 1
Motif ID: 83
Motif name: Motif 83
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.113312

Alignment:
AAAATGTGGTAYATAYAYAC
AAGTTCTKGGKTACATGTGC

Original motif     Consensus sequence: AAAATGTGGTAYATAYAYAC Reverse complement motif     Consensus sequence: GTKTMTATMTACCACATTTT


Dataset #: 1
Motif ID: 310
Motif name: Motif 310
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 0.591599

Alignment:
GGATTTMKGACTTGCATGGG-
-AAGTTCTKGGKTACATGTGC

Original motif     Consensus sequence: CCCATGCAAGTCYRAAATCC Reverse complement motif     Consensus sequence: GGATTTMKGACTTGCATGGG


Dataset #: 1 Motif ID: 226 Motif name: Motif 226

Original motif     Consensus sequence: AATAAACATGG Reverse complement motif     Consensus sequence: CCATGTTTATT

Best Matches for Motif ID 226 (Highest to Lowest)

Dataset #: 1
Motif ID: 270
Motif name: Motif 270
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0612696

Alignment:
CCTMACAATCATGG
---AATAAACATGG

Original motif     Consensus sequence: CCATGATTGTRAGG Reverse complement motif     Consensus sequence: CCTMACAATCATGG


Dataset #: 1
Motif ID: 252
Motif name: Motif 252
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0671681

Alignment:
CCMKGCTAATT
CCATGTTTATT

Original motif     Consensus sequence: AATTAGCYRGG Reverse complement motif     Consensus sequence: CCMKGCTAATT


Dataset #: 1 Motif ID: 227 Motif name: Motif 227

Original motif     Consensus sequence: CCCAAATCTCATSTTGAAT Reverse complement motif     Consensus sequence: ATTCAASATGAGATTTGGG

Best Matches for Motif ID 227 (Highest to Lowest)

Dataset #: 1
Motif ID: 170
Motif name: Motif 170
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 19
Similarity score: 0.103606

Alignment:
AATCAACCCTGGYRATCAAT
-CCCAAATCTCATSTTGAAT

Original motif     Consensus sequence: AATCAACCCTGGYRATCAAT Reverse complement motif     Consensus sequence: ATTGATMKCCAGGGTTGATT


Dataset #: 1
Motif ID: 98
Motif name: Motif 98
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 18
Similarity score: 0.595387

Alignment:
-AGTTCCGGGTGGGCGTGGG
ATTCAASATGAGATTTGGG-

Original motif     Consensus sequence: AGTTCCGGGTGGGCGTGGG Reverse complement motif     Consensus sequence: CCCACGCCCACCCGGAACT


Dataset #: 1 Motif ID: 228 Motif name: Motif 228

Original motif     Consensus sequence: AGCTACTTG Reverse complement motif     Consensus sequence: CAAGTAGCT

Best Matches for Motif ID 228 (Highest to Lowest)

Dataset #: 1
Motif ID: 194
Motif name: Motif 194
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 11
Number of overlap: 9
Similarity score: 0.0385506

Alignment:
CAGCTACTCKTATACCCTTG
----------AGCTACTTG-

Original motif     Consensus sequence: CAAGGGTATAYGAGTAGCTG Reverse complement motif     Consensus sequence: CAGCTACTCKTATACCCTTG


Dataset #: 1
Motif ID: 231
Motif name: Motif 231
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 9
Similarity score: 0.0563554

Alignment:
MGAAGGGACTTGCCTTGT
---AGCTACTTG------

Original motif     Consensus sequence: ACAAGGCAAGTCCCTTCY Reverse complement motif     Consensus sequence: MGAAGGGACTTGCCTTGT


Dataset #: 1 Motif ID: 229 Motif name: Motif 229

Original motif     Consensus sequence: GCCTTGCTGCCGC Reverse complement motif     Consensus sequence: GCGGCAGCAAGGC

Best Matches for Motif ID 229 (Highest to Lowest)

Dataset #: 1
Motif ID: 247
Motif name: Motif 247
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 13
Similarity score: 0.0380597

Alignment:
GCCTCACTGCCRC
GCCTTGCTGCCGC

Original motif     Consensus sequence: GCCTCACTGCCRC Reverse complement motif     Consensus sequence: GKGGCAGTGAGGC


Dataset #: 1
Motif ID: 149
Motif name: Motif 149
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 6
Number of overlap: 13
Similarity score: 0.0728792

Alignment:
GGGTGCAGGMGGGCTGAGT
-GCGGCAGCAAGGC-----

Original motif     Consensus sequence: ACTCAGCCCRCCTGCACCC Reverse complement motif     Consensus sequence: GGGTGCAGGMGGGCTGAGT


Dataset #: 1 Motif ID: 230 Motif name: Motif 230

Original motif     Consensus sequence: AGAAAGGCATGTGAAAA Reverse complement motif     Consensus sequence: TTTTCACATGCCTTTCT

Best Matches for Motif ID 230 (Highest to Lowest)

Dataset #: 1
Motif ID: 254
Motif name: Motif 254
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 17
Similarity score: 0.093628

Alignment:
AAAATCACAAGCATTCCTAT
-TTTTCACATGCCTTTCT--

Original motif     Consensus sequence: AAAATCACAAGCATTCCTAT Reverse complement motif     Consensus sequence: ATAGGAATGCTTGTGATTTT


Dataset #: 1
Motif ID: 12
Motif name: Motif 12
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 17
Similarity score: 0.102426

Alignment:
GTTGGCCAGGCTGGTCT
TTTTCACATGCCTTTCT

Original motif     Consensus sequence: AGACCAGCCTGGCCAAC Reverse complement motif     Consensus sequence: GTTGGCCAGGCTGGTCT


Dataset #: 1 Motif ID: 231 Motif name: Motif 231

Original motif     Consensus sequence: ACAAGGCAAGTCCCTTCY Reverse complement motif     Consensus sequence: MGAAGGGACTTGCCTTGT

Best Matches for Motif ID 231 (Highest to Lowest)

Dataset #: 1
Motif ID: 16
Motif name: Motif 16
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 18
Similarity score: 0.0860131

Alignment:
GAAAGGGAACTCCCTGACCC
ACAAGGCAAGTCCCTTCY--

Original motif     Consensus sequence: GAAAGGGAACTCCCTGACCC Reverse complement motif     Consensus sequence: GGGTCAGGGAGTTCCCTTTC


Dataset #: 1
Motif ID: 310
Motif name: Motif 310
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 18
Similarity score: 0.0932717

Alignment:
GGATTTMKGACTTGCATGGG
--MGAAGGGACTTGCCTTGT

Original motif     Consensus sequence: CCCATGCAAGTCYRAAATCC Reverse complement motif     Consensus sequence: GGATTTMKGACTTGCATGGG


Dataset #: 1 Motif ID: 232 Motif name: Motif 232

Original motif     Consensus sequence: AGTTGTAATTGGGAGACTT Reverse complement motif     Consensus sequence: AAGTCTCCCAATTACAACT

Best Matches for Motif ID 232 (Highest to Lowest)

Dataset #: 1
Motif ID: 336
Motif name: Motif 336
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 19
Similarity score: 0.0998938

Alignment:
ATGTAACCAAAYACCACCTG
AAGTCTCCCAATTACAACT-

Original motif     Consensus sequence: ATGTAACCAAAYACCACCTG Reverse complement motif     Consensus sequence: CAGGTGGTKTTTGGTTACAT


Dataset #: 1
Motif ID: 178
Motif name: Motif 178
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 19
Similarity score: 0.102119

Alignment:
ACTGTCTTCCACCTCCACAT
AAGTCTCCCAATTACAACT-

Original motif     Consensus sequence: ACTGTCTTCCACCTCCACAT Reverse complement motif     Consensus sequence: ATGTGGAGGTGGAAGACAGT


Dataset #: 1 Motif ID: 233 Motif name: Motif 233

Original motif     Consensus sequence: GTTAACTGTAAAACAGCCT Reverse complement motif     Consensus sequence: AGGCTGTTTTACAGTTAAC

Best Matches for Motif ID 233 (Highest to Lowest)

Dataset #: 1
Motif ID: 137
Motif name: Motif 137
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 19
Similarity score: 0.105595

Alignment:
TWTACCTATGTAACAAACCT
-GTTAACTGTAAAACAGCCT

Original motif     Consensus sequence: AGGTTTGTTACATAGGTAWA Reverse complement motif     Consensus sequence: TWTACCTATGTAACAAACCT


Dataset #: 1
Motif ID: 55
Motif name: Motif 55
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 19
Similarity score: 0.106073

Alignment:
ATGGAATAYTATTCAGCCAT
GTTAACTGTAAAACAGCCT-

Original motif     Consensus sequence: ATGGAATAYTATTCAGCCAT Reverse complement motif     Consensus sequence: ATGGCTGAATAKTATTCCAT


Dataset #: 1 Motif ID: 234 Motif name: Motif 234

Original motif     Consensus sequence: AAGGAACAAACTCCRGACAC Reverse complement motif     Consensus sequence: GTGTCKGGAGTTTGTTCCTT

Best Matches for Motif ID 234 (Highest to Lowest)

Dataset #: 1
Motif ID: 55
Motif name: Motif 55
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.0933537

Alignment:
ATGGCTGAATAKTATTCCAT
GTGTCKGGAGTTTGTTCCTT

Original motif     Consensus sequence: ATGGAATAYTATTCAGCCAT Reverse complement motif     Consensus sequence: ATGGCTGAATAKTATTCCAT


Dataset #: 1
Motif ID: 171
Motif name: Motif 171
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 19
Similarity score: 0.600364

Alignment:
-ACTTTGGACTGTGGACTTTT
GTGTCKGGAGTTTGTTCCTT-

Original motif     Consensus sequence: AAAAGTCCACAGTCCAAAGT Reverse complement motif     Consensus sequence: ACTTTGGACTGTGGACTTTT


Dataset #: 1 Motif ID: 235 Motif name: Motif 235

Original motif     Consensus sequence: TCCAAATGGGAGAAATTGGC Reverse complement motif     Consensus sequence: GCCAATTTCTCCCATTTGGA

Best Matches for Motif ID 235 (Highest to Lowest)

Dataset #: 1
Motif ID: 293
Motif name: Motif 293
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 19
Similarity score: 0.0906025

Alignment:
-CTGACTGGGAGACACCTCCC
TCCAAATGGGAGAAATTGGC-

Original motif     Consensus sequence: CTGACTGGGAGACACCTCCC Reverse complement motif     Consensus sequence: GGGAGGTGTCTCCCAGTCAG


Dataset #: 1
Motif ID: 104
Motif name: Motif 104
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 19
Similarity score: 0.0911292

Alignment:
-CAACATGGATGRARCTGGAG
TCCAAATGGGAGAAATTGGC-

Original motif     Consensus sequence: CAACATGGATGRARCTGGAG Reverse complement motif     Consensus sequence: CTCCAGKTMCATCCATGTTG


Dataset #: 1 Motif ID: 236 Motif name: Motif 236

Original motif     Consensus sequence: ATCTGAGGTACCG Reverse complement motif     Consensus sequence: CGGTACCTCAGAT

Best Matches for Motif ID 236 (Highest to Lowest)

Dataset #: 1
Motif ID: 96
Motif name: Motif 96
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 7
Number of overlap: 13
Similarity score: 0.072129

Alignment:
GGAGCCGGCTCCCTCAGCTT
------CGGTACCTCAGAT-

Original motif     Consensus sequence: AAGCTGAGGGAGCCGGCTCC Reverse complement motif     Consensus sequence: GGAGCCGGCTCCCTCAGCTT


Dataset #: 1
Motif ID: 320
Motif name: Motif 320
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 13
Similarity score: 0.0813404

Alignment:
TGGGGCTCCAGATG
CGGTACCTCAGAT-

Original motif     Consensus sequence: CATCTGGAGCCCCA Reverse complement motif     Consensus sequence: TGGGGCTCCAGATG


Dataset #: 1 Motif ID: 237 Motif name: Motif 237

Original motif     Consensus sequence: TAGCCAAGGRAA Reverse complement motif     Consensus sequence: TTKCCTTGGCTA

Best Matches for Motif ID 237 (Highest to Lowest)

Dataset #: 1
Motif ID: 274
Motif name: Motif 274
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 12
Similarity score: 0.056906

Alignment:
CTGGTCAAGGAAA
-TAGCCAAGGRAA

Original motif     Consensus sequence: CTGGTCAAGGAAA Reverse complement motif     Consensus sequence: TTTCCTTGACCAG


Dataset #: 1
Motif ID: 24
Motif name: Motif 24
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.0581846

Alignment:
TTTCTTTGACTRG
TTKCCTTGGCTA-

Original motif     Consensus sequence: CKAGTCAAAGAAA Reverse complement motif     Consensus sequence: TTTCTTTGACTRG


Dataset #: 1 Motif ID: 238 Motif name: Motif 238

Original motif     Consensus sequence: ACATGGGCG Reverse complement motif     Consensus sequence: CGCCCATGT

Best Matches for Motif ID 238 (Highest to Lowest)

Dataset #: 1
Motif ID: 324
Motif name: Motif 324
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 9
Similarity score: 0.0421539

Alignment:
TACAGGTGCGT
-ACATGGGCG-

Original motif     Consensus sequence: ACGCACCTGTA Reverse complement motif     Consensus sequence: TACAGGTGCGT


Dataset #: 1
Motif ID: 353
Motif name: Motif 353
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 9
Similarity score: 0.0421539

Alignment:
CACATGGAAGC
-ACATGGGCG-

Original motif     Consensus sequence: CACATGGAAGC Reverse complement motif     Consensus sequence: GCTTCCATGTG


Dataset #: 1 Motif ID: 239 Motif name: Motif 239

Original motif     Consensus sequence: AGCCTCCAGAACTGT Reverse complement motif     Consensus sequence: ACAGTTCTGGAGGCT

Best Matches for Motif ID 239 (Highest to Lowest)

Dataset #: 1
Motif ID: 309
Motif name: Motif 309
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 6
Number of overlap: 15
Similarity score: 0.0847179

Alignment:
MTCCTCCAGACCCCAGAATG
AGCCTCCAGAACTGT-----

Original motif     Consensus sequence: CATTCTGGGGTCTGGAGGAY Reverse complement motif     Consensus sequence: MTCCTCCAGACCCCAGAATG


Dataset #: 1
Motif ID: 307
Motif name: Motif 307
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 15
Similarity score: 0.0931523

Alignment:
AGATGCCAGCCAGAGCTCT
----AGCCTCCAGAACTGT

Original motif     Consensus sequence: AGATGCCAGCCAGAGCTCT Reverse complement motif     Consensus sequence: AGAGCTCTGGCTGGCATCT


Dataset #: 1 Motif ID: 240 Motif name: Motif 240

Original motif     Consensus sequence: ATGTGCWGTCCC Reverse complement motif     Consensus sequence: GGGACWGCACAT

Best Matches for Motif ID 240 (Highest to Lowest)

Dataset #: 1
Motif ID: 279
Motif name: Motif 279
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 12
Similarity score: 0.0578868

Alignment:
GGGGGAGACATCACACR
----GGGACWGCACAT-

Original motif     Consensus sequence: GGGGGAGACATCACACR Reverse complement motif     Consensus sequence: MGTGTGATGTCTCCCCC


Dataset #: 1
Motif ID: 306
Motif name: Motif 306
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 12
Similarity score: 0.0660844

Alignment:
GACATGAGCTGGCGCTTG
---ATGTGCWGTCCC---

Original motif     Consensus sequence: GACATGAGCTGGCGCTTG Reverse complement motif     Consensus sequence: CAAGCGCCAGCTCATGTC


Dataset #: 1 Motif ID: 241 Motif name: Motif 241

Original motif     Consensus sequence: GCACTGAGTGAACGA Reverse complement motif     Consensus sequence: TCGTTCACTCAGTGC

Best Matches for Motif ID 241 (Highest to Lowest)

Dataset #: 1
Motif ID: 144
Motif name: Motif 144
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 6
Number of overlap: 15
Similarity score: 0.0442756

Alignment:
CCGCTGCACTGTGGGAGCCC
-----GCACTGAGTGAACGA

Original motif     Consensus sequence: CCGCTGCACTGTGGGAGCCC Reverse complement motif     Consensus sequence: GGGCTCCCACAGTGCAGCGG


Dataset #: 1
Motif ID: 61
Motif name: Motif 61
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 15
Similarity score: 0.0478162

Alignment:
GGATCCACTGGGTGAAGCCA
----GCACTGAGTGAACGA-

Original motif     Consensus sequence: GGATCCACTGGGTGAAGCCA Reverse complement motif     Consensus sequence: TGGCTTCACCCAGTGGATCC


Dataset #: 1 Motif ID: 242 Motif name: Motif 242

Original motif     Consensus sequence: AACCCTATTGTGAACTGYG Reverse complement motif     Consensus sequence: CMCAGTTCACAATAGGGTT

Best Matches for Motif ID 242 (Highest to Lowest)

Dataset #: 1
Motif ID: 176
Motif name: Motif 176
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 19
Similarity score: 0.0985886

Alignment:
AACAACASACACTGGGGCCT
CMCAGTTCACAATAGGGTT-

Original motif     Consensus sequence: AGGCCCCAGTGTSTGTTGTT Reverse complement motif     Consensus sequence: AACAACASACACTGGGGCCT


Dataset #: 1
Motif ID: 202
Motif name: Motif 202
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 19
Similarity score: 0.11357

Alignment:
ACACATCACAAAGCAGTTTC
CMCAGTTCACAATAGGGTT-

Original motif     Consensus sequence: ACACATCACAAAGCAGTTTC Reverse complement motif     Consensus sequence: GAAACTGCTTTGTGATGTGT


Dataset #: 1 Motif ID: 243 Motif name: Motif 243

Original motif     Consensus sequence: CAGTGGTTCTCAA Reverse complement motif     Consensus sequence: TTGAGAACCACTG

Best Matches for Motif ID 243 (Highest to Lowest)

Dataset #: 1
Motif ID: 350
Motif name: Motif 350
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 5
Number of overlap: 13
Similarity score: 0.0720775

Alignment:
TGCTGGAGGTCCACTCCAGA
---TTGAGAACCACTG----

Original motif     Consensus sequence: TCTGGAGTGGACCTCCAGCA Reverse complement motif     Consensus sequence: TGCTGGAGGTCCACTCCAGA


Dataset #: 1
Motif ID: 147
Motif name: Motif 147
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 13
Similarity score: 0.0768151

Alignment:
CTGGGCACCATTGA
-TTGAGAACCACTG

Original motif     Consensus sequence: CTGGGCACCATTGA Reverse complement motif     Consensus sequence: TCAATGGTGCCCAG


Dataset #: 1 Motif ID: 244 Motif name: Motif 244

Original motif     Consensus sequence: GTATWTACCCA Reverse complement motif     Consensus sequence: TGGGTAWATAC

Best Matches for Motif ID 244 (Highest to Lowest)

Dataset #: 1
Motif ID: 168
Motif name: Motif 168
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 11
Similarity score: 0.0692202

Alignment:
GGTGGGAGAAATACCT
---TGGGTAWATAC--

Original motif     Consensus sequence: AGGTATTTCTCCCACC Reverse complement motif     Consensus sequence: GGTGGGAGAAATACCT


Dataset #: 1
Motif ID: 319
Motif name: Motif 319
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0769317

Alignment:
TTGTTAAAAACTA
TGGGTAWATAC--

Original motif     Consensus sequence: TAGTTTTTAACAA Reverse complement motif     Consensus sequence: TTGTTAAAAACTA


Dataset #: 1 Motif ID: 245 Motif name: Motif 245

Original motif     Consensus sequence: CAGACTGCCTCCTCAA Reverse complement motif     Consensus sequence: TTGAGGAGGCAGTCTG

Best Matches for Motif ID 245 (Highest to Lowest)

Dataset #: 1
Motif ID: 178
Motif name: Motif 178
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 16
Similarity score: 0.0807607

Alignment:
ATGTGGAGGTGGAAGACAGT
---TTGAGGAGGCAGTCTG-

Original motif     Consensus sequence: ACTGTCTTCCACCTCCACAT Reverse complement motif     Consensus sequence: ATGTGGAGGTGGAAGACAGT


Dataset #: 1
Motif ID: 96
Motif name: Motif 96
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 16
Similarity score: 0.0972589

Alignment:
AAGCTGAGGGAGCCGGCTCC
-TTGAGGAGGCAGTCTG---

Original motif     Consensus sequence: AAGCTGAGGGAGCCGGCTCC Reverse complement motif     Consensus sequence: GGAGCCGGCTCCCTCAGCTT


Dataset #: 1 Motif ID: 246 Motif name: Motif 246

Original motif     Consensus sequence: GCAGCTTCACTCCTGA Reverse complement motif     Consensus sequence: TCAGGAGTGAAGCTGC

Best Matches for Motif ID 246 (Highest to Lowest)

Dataset #: 1
Motif ID: 350
Motif name: Motif 350
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 16
Similarity score: 0.0626054

Alignment:
TCTGGAGTGGACCTCCAGCA
TCAGGAGTGAAGCTGC----

Original motif     Consensus sequence: TCTGGAGTGGACCTCCAGCA Reverse complement motif     Consensus sequence: TGCTGGAGGTCCACTCCAGA


Dataset #: 1
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 16
Similarity score: 0.0810673

Alignment:
GCTGGAGTGCAGTGGCRYGA
----TCAGGAGTGAAGCTGC

Original motif     Consensus sequence: GCTGGAGTGCAGTGGCRYGA Reverse complement motif     Consensus sequence: TCKMGCCACTGCACTCCAGC


Dataset #: 1 Motif ID: 247 Motif name: Motif 247

Original motif     Consensus sequence: GCCTCACTGCCRC Reverse complement motif     Consensus sequence: GKGGCAGTGAGGC

Best Matches for Motif ID 247 (Highest to Lowest)

Dataset #: 1
Motif ID: 136
Motif name: Motif 136
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 13
Similarity score: 0.0407776

Alignment:
CCCCGGGCAGTGAGGG
---GKGGCAGTGAGGC

Original motif     Consensus sequence: CCCTCACTGCCCGGGG Reverse complement motif     Consensus sequence: CCCCGGGCAGTGAGGG


Dataset #: 1
Motif ID: 229
Motif name: Motif 229
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 13
Similarity score: 0.0419595

Alignment:
GCCTTGCTGCCGC
GCCTCACTGCCRC

Original motif     Consensus sequence: GCCTTGCTGCCGC Reverse complement motif     Consensus sequence: GCGGCAGCAAGGC


Dataset #: 1 Motif ID: 248 Motif name: Motif 248

Original motif     Consensus sequence: TAATGGGTACAAA Reverse complement motif     Consensus sequence: TTTGTACCCATTA

Best Matches for Motif ID 248 (Highest to Lowest)

Dataset #: 1
Motif ID: 289
Motif name: Motif 289
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 13
Similarity score: 0.0609387

Alignment:
TGATGGGTGCACCAAA
TAATGGGTACAAA---

Original motif     Consensus sequence: TGATGGGTGCACCAAA Reverse complement motif     Consensus sequence: TTTGGTGCACCCATCA


Dataset #: 1
Motif ID: 356
Motif name: Motif 356
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 13
Similarity score: 0.0698241

Alignment:
AATTAAAAGACACAGACTG
---TAATGGGTACAAA---

Original motif     Consensus sequence: AATTAAAAGACACAGACTG Reverse complement motif     Consensus sequence: CAGTCTGTGTCTTTTAATT


Dataset #: 1 Motif ID: 249 Motif name: Motif 249

Original motif     Consensus sequence: TGTGAAGAGACCACCAA Reverse complement motif     Consensus sequence: TTGGTGGTCTCTTCACA

Best Matches for Motif ID 249 (Highest to Lowest)

Dataset #: 1
Motif ID: 294
Motif name: Motif 294
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 17
Similarity score: 0.0818261

Alignment:
AGCTGTGAGAAGAGGGCCAC
---TGTGAAGAGACCACCAA

Original motif     Consensus sequence: AGCTGTGAGAAGAGGGCCAC Reverse complement motif     Consensus sequence: GTGGCCCTCTTCTCACAGCT


Dataset #: 1
Motif ID: 279
Motif name: Motif 279
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 17
Similarity score: 0.106605

Alignment:
MGTGTGATGTCTCCCCC
TTGGTGGTCTCTTCACA

Original motif     Consensus sequence: GGGGGAGACATCACACR Reverse complement motif     Consensus sequence: MGTGTGATGTCTCCCCC


Dataset #: 1 Motif ID: 250 Motif name: Motif 250

Original motif     Consensus sequence: CCACCGCTCC Reverse complement motif     Consensus sequence: GGAGCGGTGG

Best Matches for Motif ID 250 (Highest to Lowest)

Dataset #: 1
Motif ID: 107
Motif name: Motif 107
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.03718

Alignment:
GGMGCKGTGGCTC
GGAGCGGTGG---

Original motif     Consensus sequence: GAGCCACYGCRCC Reverse complement motif     Consensus sequence: GGMGCKGTGGCTC


Dataset #: 1
Motif ID: 56
Motif name: Motif 56
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 7
Number of overlap: 10
Similarity score: 0.0459856

Alignment:
CRTGAGCCACYGYRCCYGGC
------CCACCGCTCC----

Original motif     Consensus sequence: CRTGAGCCACYGYRCCYGGC Reverse complement motif     Consensus sequence: GCCKGGMKCMGTGGCTCAKG


Dataset #: 1 Motif ID: 251 Motif name: Motif 251

Original motif     Consensus sequence: CAGGCTGGTCTCG Reverse complement motif     Consensus sequence: CGAGACCAGCCTG

Best Matches for Motif ID 251 (Highest to Lowest)

Dataset #: 1
Motif ID: 307
Motif name: Motif 307
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 7
Number of overlap: 13
Similarity score: 0.0730434

Alignment:
AGATGCCAGCCAGAGCTCT
CGAGACCAGCCTG------

Original motif     Consensus sequence: AGATGCCAGCCAGAGCTCT Reverse complement motif     Consensus sequence: AGAGCTCTGGCTGGCATCT


Dataset #: 1
Motif ID: 192
Motif name: Motif 192
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 6
Number of overlap: 13
Similarity score: 0.0761402

Alignment:
ACAGGCTGTCCCAGGATTC
-----CAGGCTGGTCTCG-

Original motif     Consensus sequence: GAATCCTGGGACAGCCTGT Reverse complement motif     Consensus sequence: ACAGGCTGTCCCAGGATTC


Dataset #: 1 Motif ID: 252 Motif name: Motif 252

Original motif     Consensus sequence: AATTAGCYRGG Reverse complement motif     Consensus sequence: CCMKGCTAATT

Best Matches for Motif ID 252 (Highest to Lowest)

Dataset #: 1
Motif ID: 226
Motif name: Motif 226
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0630561

Alignment:
CCATGTTTATT
CCMKGCTAATT

Original motif     Consensus sequence: AATAAACATGG Reverse complement motif     Consensus sequence: CCATGTTTATT


Dataset #: 1
Motif ID: 38
Motif name: Motif 38
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 11
Similarity score: 0.0649059

Alignment:
TCTMKGCTCACTGC
-CCMKGCTAATT--

Original motif     Consensus sequence: GCAGTGAGCYRAGA Reverse complement motif     Consensus sequence: TCTMKGCTCACTGC


Dataset #: 1 Motif ID: 253 Motif name: Motif 253

Original motif     Consensus sequence: AGAGTCTCACTCTGT Reverse complement motif     Consensus sequence: ACAGAGTGAGACTCT

Best Matches for Motif ID 253 (Highest to Lowest)

Dataset #: 1
Motif ID: 231
Motif name: Motif 231
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 15
Similarity score: 0.0826494

Alignment:
ACAAGGCAAGTCCCTTCY
---ACAGAGTGAGACTCT

Original motif     Consensus sequence: ACAAGGCAAGTCCCTTCY Reverse complement motif     Consensus sequence: MGAAGGGACTTGCCTTGT


Dataset #: 1
Motif ID: 43
Motif name: Motif 43
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 15
Similarity score: 0.0874293

Alignment:
AGGAGRCMCTCTGCCTGGC
-AGAGTCTCACTCTGT---

Original motif     Consensus sequence: GCCAGGCAGAGRGKCTCCT Reverse complement motif     Consensus sequence: AGGAGRCMCTCTGCCTGGC


Dataset #: 1 Motif ID: 254 Motif name: Motif 254

Original motif     Consensus sequence: AAAATCACAAGCATTCCTAT Reverse complement motif     Consensus sequence: ATAGGAATGCTTGTGATTTT

Best Matches for Motif ID 254 (Highest to Lowest)

Dataset #: 1
Motif ID: 83
Motif name: Motif 83
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.113683

Alignment:
AAAATGTGGTAYATAYAYAC
AAAATCACAAGCATTCCTAT

Original motif     Consensus sequence: AAAATGTGGTAYATAYAYAC Reverse complement motif     Consensus sequence: GTKTMTATMTACCACATTTT


Dataset #: 1
Motif ID: 308
Motif name: Motif 308
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 0.596633

Alignment:
GTTATTAATTGGCCTAATTT-
-ATAGGAATGCTTGTGATTTT

Original motif     Consensus sequence: AAATTAGGCCAATTAATAAC Reverse complement motif     Consensus sequence: GTTATTAATTGGCCTAATTT


Dataset #: 1 Motif ID: 255 Motif name: Motif 255

Original motif     Consensus sequence: CTGCTATAACAAA Reverse complement motif     Consensus sequence: TTTGTTATAGCAG

Best Matches for Motif ID 255 (Highest to Lowest)

Dataset #: 1
Motif ID: 137
Motif name: Motif 137
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 13
Similarity score: 0.0686391

Alignment:
AGGTTTGTTACATAGGTAWA
----TTTGTTATAGCAG---

Original motif     Consensus sequence: AGGTTTGTTACATAGGTAWA Reverse complement motif     Consensus sequence: TWTACCTATGTAACAAACCT


Dataset #: 1
Motif ID: 299
Motif name: Motif 299
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 13
Similarity score: 0.0785239

Alignment:
TTGGAGGTTCTAGCAGGG
---TTTGTTATAGCAG--

Original motif     Consensus sequence: CCCTGCTAGAACCTCCAA Reverse complement motif     Consensus sequence: TTGGAGGTTCTAGCAGGG


Dataset #: 1 Motif ID: 256 Motif name: Motif 256

Original motif     Consensus sequence: RCAGTGTACACTGY Reverse complement motif     Consensus sequence: KCAGTGTACACTGM

Best Matches for Motif ID 256 (Highest to Lowest)

Dataset #: 1
Motif ID: 242
Motif name: Motif 242
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 14
Similarity score: 0.0643389

Alignment:
AACCCTATTGTGAACTGYG
----RCAGTGTACACTGY-

Original motif     Consensus sequence: AACCCTATTGTGAACTGYG Reverse complement motif     Consensus sequence: CMCAGTTCACAATAGGGTT


Dataset #: 1
Motif ID: 176
Motif name: Motif 176
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 14
Similarity score: 0.0671024

Alignment:
AGGCCCCAGTGTSTGTTGTT
-----RCAGTGTACACTGY-

Original motif     Consensus sequence: AGGCCCCAGTGTSTGTTGTT Reverse complement motif     Consensus sequence: AACAACASACACTGGGGCCT


Dataset #: 1 Motif ID: 257 Motif name: Motif 257

Original motif     Consensus sequence: GAGAACACATGGACA Reverse complement motif     Consensus sequence: TGTCCATGTGTTCTC

Best Matches for Motif ID 257 (Highest to Lowest)

Dataset #: 1
Motif ID: 63
Motif name: Motif 63
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 15
Similarity score: 0.0985209

Alignment:
AGTGAGAACATRYRRTRTTT
---GAGAACACATGGACA--

Original motif     Consensus sequence: AGTGAGAACATRYRRTRTTT Reverse complement motif     Consensus sequence: AAAMAMMKMATGTTCTCACT


Dataset #: 1
Motif ID: 221
Motif name: Motif 221
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 15
Similarity score: 0.10032

Alignment:
GGGAGGAAGGGGACAC
GAGAACACATGGACA-

Original motif     Consensus sequence: GGGAGGAAGGGGACAC Reverse complement motif     Consensus sequence: GTGTCCCCTTCCTCCC


Dataset #: 1 Motif ID: 258 Motif name: Motif 258

Original motif     Consensus sequence: CCACCAACAGTGTAY Reverse complement motif     Consensus sequence: MTACACTGTTGGTGG

Best Matches for Motif ID 258 (Highest to Lowest)

Dataset #: 1
Motif ID: 144
Motif name: Motif 144
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 15
Similarity score: 0.0771788

Alignment:
GGGCTCCCACAGTGCAGCGG
---CCACCAACAGTGTAY--

Original motif     Consensus sequence: CCGCTGCACTGTGGGAGCCC Reverse complement motif     Consensus sequence: GGGCTCCCACAGTGCAGCGG


Dataset #: 1
Motif ID: 330
Motif name: Motif 330
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 5
Number of overlap: 15
Similarity score: 0.0810042

Alignment:
ATAAAAACTTGCTGGTTTT
MTACACTGTTGGTGG----

Original motif     Consensus sequence: AAAACCAGCAAGTTTTTAT Reverse complement motif     Consensus sequence: ATAAAAACTTGCTGGTTTT


Dataset #: 1 Motif ID: 259 Motif name: Motif 259

Original motif     Consensus sequence: CCCACACCCTTATTA Reverse complement motif     Consensus sequence: TAATAAGGGTGTGGG

Best Matches for Motif ID 259 (Highest to Lowest)

Dataset #: 1
Motif ID: 169
Motif name: Motif 169
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 15
Similarity score: 0.0922705

Alignment:
TTTTATAGGATTTGGG
-TAATAAGGGTGTGGG

Original motif     Consensus sequence: CCCAAATCCTATAAAA Reverse complement motif     Consensus sequence: TTTTATAGGATTTGGG


Dataset #: 1
Motif ID: 312
Motif name: Motif 312
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 15
Similarity score: 0.0982406

Alignment:
CCCMKGGCACCCTCAGTCCT
---CCCACACCCTTATTA--

Original motif     Consensus sequence: AGGACTGAGGGTGCCYRGGG Reverse complement motif     Consensus sequence: CCCMKGGCACCCTCAGTCCT


Dataset #: 1 Motif ID: 260 Motif name: Motif 260

Original motif     Consensus sequence: GGTGCCCCTCTGGGACRAA Reverse complement motif     Consensus sequence: TTMGTCCCAGAGGGGCACC

Best Matches for Motif ID 260 (Highest to Lowest)

Dataset #: 1
Motif ID: 84
Motif name: Motif 84
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 19
Similarity score: 0.0961044

Alignment:
CTGGGTCCCCCAGCAGTGCC
TTMGTCCCAGAGGGGCACC-

Original motif     Consensus sequence: CTGGGTCCCCCAGCAGTGCC Reverse complement motif     Consensus sequence: GGCACTGCTGGGGGACCCAG


Dataset #: 1
Motif ID: 61
Motif name: Motif 61
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 0.100972

Alignment:
TGGCTTCACCCAGTGGATCC
-TTMGTCCCAGAGGGGCACC

Original motif     Consensus sequence: GGATCCACTGGGTGAAGCCA Reverse complement motif     Consensus sequence: TGGCTTCACCCAGTGGATCC


Dataset #: 1 Motif ID: 261 Motif name: Motif 261

Original motif     Consensus sequence: ATCTCASAAATCACCACTA Reverse complement motif     Consensus sequence: TAGTGGTGATTTSTGAGAT

Best Matches for Motif ID 261 (Highest to Lowest)

Dataset #: 1
Motif ID: 336
Motif name: Motif 336
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 19
Similarity score: 0.0782433

Alignment:
ATGTAACCAAAYACCACCTG
ATCTCASAAATCACCACTA-

Original motif     Consensus sequence: ATGTAACCAAAYACCACCTG Reverse complement motif     Consensus sequence: CAGGTGGTKTTTGGTTACAT


Dataset #: 1
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 19
Similarity score: 0.0942998

Alignment:
GTCTCWAMAAAAAAWAMAAA
ATCTCASAAATCACCACTA-

Original motif     Consensus sequence: GTCTCWAMAAAAAAWAMAAA Reverse complement motif     Consensus sequence: TTTYTWTTTTTTYTWGAGAC


Dataset #: 1 Motif ID: 262 Motif name: Motif 262

Original motif     Consensus sequence: CTCAGTGTTAATCTCCTGTC Reverse complement motif     Consensus sequence: GACAGGAGATTAACACTGAG

Best Matches for Motif ID 262 (Highest to Lowest)

Dataset #: 1
Motif ID: 293
Motif name: Motif 293
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.108944

Alignment:
CTGACTGGGAGACACCTCCC
CTCAGTGTTAATCTCCTGTC

Original motif     Consensus sequence: CTGACTGGGAGACACCTCCC Reverse complement motif     Consensus sequence: GGGAGGTGTCTCCCAGTCAG


Dataset #: 1
Motif ID: 19
Motif name: Motif 19
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 0.600148

Alignment:
MGGGATATAATCTCCTGGTG-
-CTCAGTGTTAATCTCCTGTC

Original motif     Consensus sequence: CACCAGGAGATTATATCCCR Reverse complement motif     Consensus sequence: MGGGATATAATCTCCTGGTG


Dataset #: 1 Motif ID: 263 Motif name: Motif 263

Original motif     Consensus sequence: CCCAGCTCTGCC Reverse complement motif     Consensus sequence: GGCAGAGCTGGG

Best Matches for Motif ID 263 (Highest to Lowest)

Dataset #: 1
Motif ID: 84
Motif name: Motif 84
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.0427579

Alignment:
GGCACTGCTGGGGGACCCAG
GGCAGAGCTGGG--------

Original motif     Consensus sequence: CTGGGTCCCCCAGCAGTGCC Reverse complement motif     Consensus sequence: GGCACTGCTGGGGGACCCAG


Dataset #: 1
Motif ID: 183
Motif name: Motif 183
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.0507335

Alignment:
GCCRGCCCTGCYGGCC
CCCAGCTCTGCC----

Original motif     Consensus sequence: GCCRGCCCTGCYGGCC Reverse complement motif     Consensus sequence: GGCCMGCAGGGCKGGC


Dataset #: 1 Motif ID: 264 Motif name: Motif 264

Original motif     Consensus sequence: CCAAGGTCACA Reverse complement motif     Consensus sequence: TGTGACCTTGG

Best Matches for Motif ID 264 (Highest to Lowest)

Dataset #: 1
Motif ID: 112
Motif name: Motif 112
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 11
Similarity score: 0.0343671

Alignment:
CTTGCCCAAGGTCACACAGC
----CCAAGGTCACA-----

Original motif     Consensus sequence: GCTGTGTGACCTTGGGCAAG Reverse complement motif     Consensus sequence: CTTGCCCAAGGTCACACAGC


Dataset #: 1
Motif ID: 242
Motif name: Motif 242
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0609262

Alignment:
AACCCTATTGTGAACTGYG
TGTGACCTTGG--------

Original motif     Consensus sequence: AACCCTATTGTGAACTGYG Reverse complement motif     Consensus sequence: CMCAGTTCACAATAGGGTT


Dataset #: 1 Motif ID: 265 Motif name: Motif 265

Original motif     Consensus sequence: GCGCATGCGCA Reverse complement motif     Consensus sequence: TGCGCATGCGC

Best Matches for Motif ID 265 (Highest to Lowest)

Dataset #: 1
Motif ID: 180
Motif name: Motif 180
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.00596496

Alignment:
TGCGCATGCGCA
-GCGCATGCGCA

Original motif     Consensus sequence: TGCGCATGCGCA Reverse complement motif     Consensus sequence: TGCGCATGCGCA


Dataset #: 1
Motif ID: 100
Motif name: Motif 100
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 11
Similarity score: 0.0616255

Alignment:
CGCGGCGCTTGCGGGCCAGC
---TGCGCATGCGC------

Original motif     Consensus sequence: GCTGGCCCGCAAGCGCCGCG Reverse complement motif     Consensus sequence: CGCGGCGCTTGCGGGCCAGC


Dataset #: 1 Motif ID: 266 Motif name: Motif 266

Original motif     Consensus sequence: GCAGCAGCAGCA Reverse complement motif     Consensus sequence: TGCTGCTGCTGC

Best Matches for Motif ID 266 (Highest to Lowest)

Dataset #: 1
Motif ID: 101
Motif name: Motif 101
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.0655581

Alignment:
CGCCGCCGCCGC
TGCTGCTGCTGC

Original motif     Consensus sequence: CGCCGCCGCCGC Reverse complement motif     Consensus sequence: GCGGCGGCGGCG


Dataset #: 1
Motif ID: 313
Motif name: Motif 313
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 12
Similarity score: 0.0732114

Alignment:
MGCTGAGGCAGGAG
-GCAGCAGCAGCA-

Original motif     Consensus sequence: CTCCTGCCTCAGCY Reverse complement motif     Consensus sequence: MGCTGAGGCAGGAG


Dataset #: 1 Motif ID: 267 Motif name: Motif 267

Original motif     Consensus sequence: ATGGACTTGAGA Reverse complement motif     Consensus sequence: TCTCAAGTCCAT

Best Matches for Motif ID 267 (Highest to Lowest)

Dataset #: 1
Motif ID: 291
Motif name: Motif 291
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 6
Number of overlap: 12
Similarity score: 0.0822148

Alignment:
CTGAGGACCTGAGGTCRTA
--ATGGACTTGAGA-----

Original motif     Consensus sequence: CTGAGGACCTGAGGTCRTA Reverse complement motif     Consensus sequence: TAMGACCTCAGGTCCTCAG


Dataset #: 1
Motif ID: 21
Motif name: Motif 21
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 12
Similarity score: 0.0832965

Alignment:
KACGGGCTTAARAAACGGC
------ATGGACTTGAGA-

Original motif     Consensus sequence: GCCGTTTKTTAAGCCCGTY Reverse complement motif     Consensus sequence: KACGGGCTTAARAAACGGC


Dataset #: 1 Motif ID: 268 Motif name: Motif 268

Original motif     Consensus sequence: ATAGTGAGACC Reverse complement motif     Consensus sequence: GGTCTCACTAT

Best Matches for Motif ID 268 (Highest to Lowest)

Dataset #: 1
Motif ID: 32
Motif name: Motif 32
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0513709

Alignment:
ATGGTGAAACCC
ATAGTGAGACC-

Original motif     Consensus sequence: ATGGTGAAACCC Reverse complement motif     Consensus sequence: GGGTTTCACCAT


Dataset #: 1
Motif ID: 253
Motif name: Motif 253
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 11
Similarity score: 0.0539738

Alignment:
ACAGAGTGAGACTCT
--ATAGTGAGACC--

Original motif     Consensus sequence: AGAGTCTCACTCTGT Reverse complement motif     Consensus sequence: ACAGAGTGAGACTCT


Dataset #: 1 Motif ID: 269 Motif name: Motif 269

Original motif     Consensus sequence: AGCGACATGTGC Reverse complement motif     Consensus sequence: GCACATGTCGCT

Best Matches for Motif ID 269 (Highest to Lowest)

Dataset #: 1
Motif ID: 225
Motif name: Motif 225
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.0483903

Alignment:
GCACATGTAYCCYAGAACTT
--------GCACATGTCGCT

Original motif     Consensus sequence: GCACATGTAYCCYAGAACTT Reverse complement motif     Consensus sequence: AAGTTCTKGGKTACATGTGC


Dataset #: 1
Motif ID: 166
Motif name: Motif 166
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 12
Similarity score: 0.0581181

Alignment:
CTCRAATGTCCCTT
-GCACATGTCGCT-

Original motif     Consensus sequence: AAGGGACATTKGAG Reverse complement motif     Consensus sequence: CTCRAATGTCCCTT


Dataset #: 1 Motif ID: 270 Motif name: Motif 270

Original motif     Consensus sequence: CCATGATTGTRAGG Reverse complement motif     Consensus sequence: CCTMACAATCATGG

Best Matches for Motif ID 270 (Highest to Lowest)

Dataset #: 1
Motif ID: 136
Motif name: Motif 136
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 14
Similarity score: 0.0904714

Alignment:
CCCTCACTGCCCGGGG
-CCTMACAATCATGG-

Original motif     Consensus sequence: CCCTCACTGCCCGGGG Reverse complement motif     Consensus sequence: CCCCGGGCAGTGAGGG


Dataset #: 1
Motif ID: 95
Motif name: Motif 95
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 14
Similarity score: 0.091519

Alignment:
CACCTCCCAGACMGGGT
--CCTMACAATCATGG-

Original motif     Consensus sequence: ACCCYGTCTGGGAGGTG Reverse complement motif     Consensus sequence: CACCTCCCAGACMGGGT


Dataset #: 1 Motif ID: 271 Motif name: Motif 271

Original motif     Consensus sequence: AGGGATCTAGGTTGCR Reverse complement motif     Consensus sequence: KGCAACCTAGATCCCT

Best Matches for Motif ID 271 (Highest to Lowest)

Dataset #: 1
Motif ID: 307
Motif name: Motif 307
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 16
Similarity score: 0.0814563

Alignment:
AGAGCTCTGGCTGGCATCT
AGGGATCTAGGTTGCR---

Original motif     Consensus sequence: AGATGCCAGCCAGAGCTCT Reverse complement motif     Consensus sequence: AGAGCTCTGGCTGGCATCT


Dataset #: 1
Motif ID: 58
Motif name: Motif 58
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 16
Similarity score: 0.0869615

Alignment:
ATGGACAYTTRGGTTGHTTC
--AGGGATCTAGGTTGCR--

Original motif     Consensus sequence: ATGGACAYTTRGGTTGHTTC Reverse complement motif     Consensus sequence: GAAHCAACCKAAKTGTCCAT


Dataset #: 1 Motif ID: 272 Motif name: Motif 272

Original motif     Consensus sequence: CAGCTGTCAC Reverse complement motif     Consensus sequence: GTGACAGCTG

Best Matches for Motif ID 272 (Highest to Lowest)

Dataset #: 1
Motif ID: 334
Motif name: Motif 334
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0227273

Alignment:
CATCTGTCAC
CAGCTGTCAC

Original motif     Consensus sequence: CATCTGTCAC Reverse complement motif     Consensus sequence: GTGACAGATG


Dataset #: 1
Motif ID: 199
Motif name: Motif 199
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.037149

Alignment:
GGTGCCAGCTGT
-GTGACAGCTG-

Original motif     Consensus sequence: ACAGCTGGCACC Reverse complement motif     Consensus sequence: GGTGCCAGCTGT


Dataset #: 1 Motif ID: 273 Motif name: Motif 273

Original motif     Consensus sequence: AGCCTAGGCCTAC Reverse complement motif     Consensus sequence: GTAGGCCTAGGCT

Best Matches for Motif ID 273 (Highest to Lowest)

Dataset #: 1
Motif ID: 365
Motif name: Motif 365
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 13
Similarity score: 0.0731001

Alignment:
AGCTCCGGTCTAC
AGCCTAGGCCTAC

Original motif     Consensus sequence: AGCTCCGGTCTAC Reverse complement motif     Consensus sequence: GTAGACCGGAGCT


Dataset #: 1
Motif ID: 13
Motif name: Motif 13
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 13
Similarity score: 0.0735654

Alignment:
AAGCAGGGCGAGGCATTGCC
-----GTAGGCCTAGGCT--

Original motif     Consensus sequence: AAGCAGGGCGAGGCATTGCC Reverse complement motif     Consensus sequence: GGCAATGCCTCGCCCTGCTT


Dataset #: 1 Motif ID: 274 Motif name: Motif 274

Original motif     Consensus sequence: CTGGTCAAGGAAA Reverse complement motif     Consensus sequence: TTTCCTTGACCAG

Best Matches for Motif ID 274 (Highest to Lowest)

Dataset #: 1
Motif ID: 24
Motif name: Motif 24
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 13
Similarity score: 0.0483985

Alignment:
CKAGTCAAAGAAA
CTGGTCAAGGAAA

Original motif     Consensus sequence: CKAGTCAAAGAAA Reverse complement motif     Consensus sequence: TTTCTTTGACTRG


Dataset #: 1
Motif ID: 331
Motif name: Motif 331
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 13
Similarity score: 0.0763683

Alignment:
CCACCACAGCTCAAGGAGGC
------CTGGTCAAGGAAA-

Original motif     Consensus sequence: CCACCACAGCTCAAGGAGGC Reverse complement motif     Consensus sequence: GCCTCCTTGAGCTGTGGTGG


Dataset #: 1 Motif ID: 275 Motif name: Motif 275

Original motif     Consensus sequence: CTCACAGAGTTAAA Reverse complement motif     Consensus sequence: TTTAACTCTGTGAG

Best Matches for Motif ID 275 (Highest to Lowest)

Dataset #: 1
Motif ID: 48
Motif name: Motif 48
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 14
Similarity score: 0.0799887

Alignment:
CGTCGCTCACGCTGGGAGCT
----TTTAACTCTGTGAG--

Original motif     Consensus sequence: AGCTCCCAGCGTGAGCGACG Reverse complement motif     Consensus sequence: CGTCGCTCACGCTGGGAGCT


Dataset #: 1
Motif ID: 137
Motif name: Motif 137
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 7
Number of overlap: 14
Similarity score: 0.0822742

Alignment:
TWTACCTATGTAACAAACCT
TTTAACTCTGTGAG------

Original motif     Consensus sequence: AGGTTTGTTACATAGGTAWA Reverse complement motif     Consensus sequence: TWTACCTATGTAACAAACCT


Dataset #: 1 Motif ID: 276 Motif name: Motif 276

Original motif     Consensus sequence: TGGCCTGTTAGGAA Reverse complement motif     Consensus sequence: TTCCTAACAGGCCA

Best Matches for Motif ID 276 (Highest to Lowest)

Dataset #: 1
Motif ID: 45
Motif name: Motif 45
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0718165

Alignment:
TGCCCAGTCTGGAAAGTG
TGGCCTGTTAGGAA----

Original motif     Consensus sequence: TGCCCAGTCTGGAAAGTG Reverse complement motif     Consensus sequence: CACTTTCCAGACTGGGCA


Dataset #: 1
Motif ID: 308
Motif name: Motif 308
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 14
Similarity score: 0.0893293

Alignment:
AAATTAGGCCAATTAATAAC
-----TGGCCTGTTAGGAA-

Original motif     Consensus sequence: AAATTAGGCCAATTAATAAC Reverse complement motif     Consensus sequence: GTTATTAATTGGCCTAATTT


Dataset #: 1 Motif ID: 277 Motif name: Motif 277

Original motif     Consensus sequence: GCCCTCACCAGAAGC Reverse complement motif     Consensus sequence: GCTTCTGGTGAGGGC

Best Matches for Motif ID 277 (Highest to Lowest)

Dataset #: 1
Motif ID: 96
Motif name: Motif 96
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 15
Similarity score: 0.0937412

Alignment:
AAGCTGAGGGAGCCGGCTCC
---GCTTCTGGTGAGGGC--

Original motif     Consensus sequence: AAGCTGAGGGAGCCGGCTCC Reverse complement motif     Consensus sequence: GGAGCCGGCTCCCTCAGCTT


Dataset #: 1
Motif ID: 84
Motif name: Motif 84
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 15
Similarity score: 0.094292

Alignment:
GGCACTGCTGGGGGACCCAG
GCTTCTGGTGAGGGC-----

Original motif     Consensus sequence: CTGGGTCCCCCAGCAGTGCC Reverse complement motif     Consensus sequence: GGCACTGCTGGGGGACCCAG


Dataset #: 1 Motif ID: 278 Motif name: Motif 278

Original motif     Consensus sequence: ACTTTCAGGCATAACA Reverse complement motif     Consensus sequence: TGTTATGCCTGAAAGT

Best Matches for Motif ID 278 (Highest to Lowest)

Dataset #: 1
Motif ID: 52
Motif name: Motif 52
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 16
Similarity score: 0.0883057

Alignment:
GGTGGAGCTGCCTGCCAGTC
---TGTTATGCCTGAAAGT-

Original motif     Consensus sequence: GACTGGCAGGCAGCTCCACC Reverse complement motif     Consensus sequence: GGTGGAGCTGCCTGCCAGTC


Dataset #: 1
Motif ID: 357
Motif name: Motif 357
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 16
Similarity score: 0.101075

Alignment:
TAATTTTATGTGTCAACTTG
---TGTTATGCCTGAAAGT-

Original motif     Consensus sequence: CAAGTTGACACATAAAATTA Reverse complement motif     Consensus sequence: TAATTTTATGTGTCAACTTG


Dataset #: 1 Motif ID: 279 Motif name: Motif 279

Original motif     Consensus sequence: GGGGGAGACATCACACR Reverse complement motif     Consensus sequence: MGTGTGATGTCTCCCCC

Best Matches for Motif ID 279 (Highest to Lowest)

Dataset #: 1
Motif ID: 249
Motif name: Motif 249
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 17
Similarity score: 0.10127

Alignment:
TTGGTGGTCTCTTCACA
MGTGTGATGTCTCCCCC

Original motif     Consensus sequence: TGTGAAGAGACCACCAA Reverse complement motif     Consensus sequence: TTGGTGGTCTCTTCACA


Dataset #: 1
Motif ID: 92
Motif name: Motif 92
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 17
Similarity score: 0.103877

Alignment:
GGTGGGGGGGTCAGCCCCC
-MGTGTGATGTCTCCCCC-

Original motif     Consensus sequence: GGGGGCTGACCCCCCCACC Reverse complement motif     Consensus sequence: GGTGGGGGGGTCAGCCCCC


Dataset #: 1 Motif ID: 280 Motif name: Motif 280

Original motif     Consensus sequence: CCTAGATTTCAGARGATGT Reverse complement motif     Consensus sequence: ACATCMTCTGAAATCTAGG

Best Matches for Motif ID 280 (Highest to Lowest)

Dataset #: 1
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 0.098089

Alignment:
TCKMGCCACTGCACTCCAGC
-ACATCMTCTGAAATCTAGG

Original motif     Consensus sequence: GCTGGAGTGCAGTGGCRYGA Reverse complement motif     Consensus sequence: TCKMGCCACTGCACTCCAGC


Dataset #: 1
Motif ID: 196
Motif name: Motif 196
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 19
Similarity score: 0.110835

Alignment:
CAAGCCTSKGCAATGGCAGG
ACATCMTCTGAAATCTAGG-

Original motif     Consensus sequence: CCTGCCATTGCYSAGGCTTG Reverse complement motif     Consensus sequence: CAAGCCTSKGCAATGGCAGG


Dataset #: 1 Motif ID: 281 Motif name: Motif 281

Original motif     Consensus sequence: AAATGGAATCAT Reverse complement motif     Consensus sequence: ATGATTCCATTT

Best Matches for Motif ID 281 (Highest to Lowest)

Dataset #: 1
Motif ID: 326
Motif name: Motif 326
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 12
Similarity score: 0.0598156

Alignment:
CCTTTGACTCCATGTC
---ATGATTCCATTT-

Original motif     Consensus sequence: GACATGGAGTCAAAGG Reverse complement motif     Consensus sequence: CCTTTGACTCCATGTC


Dataset #: 1
Motif ID: 308
Motif name: Motif 308
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 7
Number of overlap: 12
Similarity score: 0.0709771

Alignment:
GTTATTAATTGGCCTAATTT
------AAATGGAATCAT--

Original motif     Consensus sequence: AAATTAGGCCAATTAATAAC Reverse complement motif     Consensus sequence: GTTATTAATTGGCCTAATTT


Dataset #: 1 Motif ID: 282 Motif name: Motif 282

Original motif     Consensus sequence: GTCTCTACTAAAA Reverse complement motif     Consensus sequence: TTTTAGTAGAGAC

Best Matches for Motif ID 282 (Highest to Lowest)

Dataset #: 1
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 13
Similarity score: 0.033043

Alignment:
GTCTCWAMAAAAAAWAMAAA
GTCTCTACTAAAA-------

Original motif     Consensus sequence: GTCTCWAMAAAAAAWAMAAA Reverse complement motif     Consensus sequence: TTTYTWTTTTTTYTWGAGAC


Dataset #: 1
Motif ID: 294
Motif name: Motif 294
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 13
Similarity score: 0.0894973

Alignment:
AGCTGTGAGAAGAGGGCCAC
---TTTTAGTAGAGAC----

Original motif     Consensus sequence: AGCTGTGAGAAGAGGGCCAC Reverse complement motif     Consensus sequence: GTGGCCCTCTTCTCACAGCT


Dataset #: 1 Motif ID: 283 Motif name: Motif 283

Original motif     Consensus sequence: GCCCTCACCATCC Reverse complement motif     Consensus sequence: GGATGGTGAGGGC

Best Matches for Motif ID 283 (Highest to Lowest)

Dataset #: 1
Motif ID: 277
Motif name: Motif 277
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 13
Similarity score: 0.0577529

Alignment:
GCCCTCACCAGAAGC
GCCCTCACCATCC--

Original motif     Consensus sequence: GCCCTCACCAGAAGC Reverse complement motif     Consensus sequence: GCTTCTGGTGAGGGC


Dataset #: 1
Motif ID: 26
Motif name: Motif 26
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 5
Number of overlap: 13
Similarity score: 0.0747837

Alignment:
TMGGGAGGCTGAGGCAGGAG
---GGATGGTGAGGGC----

Original motif     Consensus sequence: CTCCTGCCTCAGCCTCCCRA Reverse complement motif     Consensus sequence: TMGGGAGGCTGAGGCAGGAG


Dataset #: 1 Motif ID: 284 Motif name: Motif 284

Original motif     Consensus sequence: CATTTGGGAGCCCATTGA Reverse complement motif     Consensus sequence: TCAATGGGCTCCCAAATG

Best Matches for Motif ID 284 (Highest to Lowest)

Dataset #: 1
Motif ID: 122
Motif name: Motif 122
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 18
Similarity score: 0.0934546

Alignment:
CCTTGGCCAGCCCAGAAAG
CATTTGGGAGCCCATTGA-

Original motif     Consensus sequence: CCTTGGCCAGCCCAGAAAG Reverse complement motif     Consensus sequence: CTTTCTGGGCTGGCCAAGG


Dataset #: 1
Motif ID: 235
Motif name: Motif 235
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 18
Similarity score: 0.105262

Alignment:
GCCAATTTCTCCCATTTGGA
TCAATGGGCTCCCAAATG--

Original motif     Consensus sequence: TCCAAATGGGAGAAATTGGC Reverse complement motif     Consensus sequence: GCCAATTTCTCCCATTTGGA


Dataset #: 1 Motif ID: 285 Motif name: Motif 285

Original motif     Consensus sequence: CACTGCACTCCAGC Reverse complement motif     Consensus sequence: GCTGGAGTGCAGTG

Best Matches for Motif ID 285 (Highest to Lowest)

Dataset #: 1
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.00211425

Alignment:
GCTGGAGTGCAGTGGCRYGA
------GCTGGAGTGCAGTG

Original motif     Consensus sequence: GCTGGAGTGCAGTGGCRYGA Reverse complement motif     Consensus sequence: TCKMGCCACTGCACTCCAGC


Dataset #: 1
Motif ID: 149
Motif name: Motif 149
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 14
Similarity score: 0.0792554

Alignment:
GGGTGCAGGMGGGCTGAGT
----GCTGGAGTGCAGTG-

Original motif     Consensus sequence: ACTCAGCCCRCCTGCACCC Reverse complement motif     Consensus sequence: GGGTGCAGGMGGGCTGAGT


Dataset #: 1 Motif ID: 286 Motif name: Motif 286

Original motif     Consensus sequence: CAGGCGGCTGGGAG Reverse complement motif     Consensus sequence: CTCCCAGCCGCCTG

Best Matches for Motif ID 286 (Highest to Lowest)

Dataset #: 1
Motif ID: 165
Motif name: Motif 165
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 7
Number of overlap: 14
Similarity score: 0.0824568

Alignment:
AGCTCMKCCTCCTGTCAGAT
CTCCCAGCCGCCTG------

Original motif     Consensus sequence: ATCTGACAGGAGGYRGAGCT Reverse complement motif     Consensus sequence: AGCTCMKCCTCCTGTCAGAT


Dataset #: 1
Motif ID: 36
Motif name: Motif 36
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 14
Similarity score: 0.0825275

Alignment:
CGCCCATCGTCTGGGATGT
--CAGGCGGCTGGGAG---

Original motif     Consensus sequence: ACATCCCAGACGATGGGCG Reverse complement motif     Consensus sequence: CGCCCATCGTCTGGGATGT


Dataset #: 1 Motif ID: 287 Motif name: Motif 287

Original motif     Consensus sequence: CATTATGCTAARTG Reverse complement motif     Consensus sequence: CAMTTAGCATAATG

Best Matches for Motif ID 287 (Highest to Lowest)

Dataset #: 1
Motif ID: 308
Motif name: Motif 308
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 14
Similarity score: 0.0753566

Alignment:
GTTATTAATTGGCCTAATTT
-----CAMTTAGCATAATG-

Original motif     Consensus sequence: AAATTAGGCCAATTAATAAC Reverse complement motif     Consensus sequence: GTTATTAATTGGCCTAATTT


Dataset #: 1
Motif ID: 70
Motif name: Motif 70
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 14
Similarity score: 0.0796028

Alignment:
GCAGCAMTATTCACAATAG
----CAMTTAGCATAATG-

Original motif     Consensus sequence: CTATTGTGAATARTGCTGC Reverse complement motif     Consensus sequence: GCAGCAMTATTCACAATAG


Dataset #: 1 Motif ID: 288 Motif name: Motif 288

Original motif     Consensus sequence: CCCAAGTCCC Reverse complement motif     Consensus sequence: GGGACTTGGG

Best Matches for Motif ID 288 (Highest to Lowest)

Dataset #: 1
Motif ID: 169
Motif name: Motif 169
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 7
Number of overlap: 10
Similarity score: 0.0450065

Alignment:
CCCAAATCCTATAAAA
CCCAAGTCCC------

Original motif     Consensus sequence: CCCAAATCCTATAAAA Reverse complement motif     Consensus sequence: TTTTATAGGATTTGGG


Dataset #: 1
Motif ID: 227
Motif name: Motif 227
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 10
Number of overlap: 10
Similarity score: 0.0494747

Alignment:
CCCAAATCTCATSTTGAAT
CCCAAGTCCC---------

Original motif     Consensus sequence: CCCAAATCTCATSTTGAAT Reverse complement motif     Consensus sequence: ATTCAASATGAGATTTGGG


Dataset #: 1 Motif ID: 289 Motif name: Motif 289

Original motif     Consensus sequence: TGATGGGTGCACCAAA Reverse complement motif     Consensus sequence: TTTGGTGCACCCATCA

Best Matches for Motif ID 289 (Highest to Lowest)

Dataset #: 1
Motif ID: 17
Motif name: Motif 17
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 16
Similarity score: 0.100149

Alignment:
AGACAGTGGGYGCAGGHCA
---TGATGGGTGCACCAAA

Original motif     Consensus sequence: AGACAGTGGGYGCAGGHCA Reverse complement motif     Consensus sequence: TGHCCTGCKCCCACTGTCT


Dataset #: 1
Motif ID: 106
Motif name: Motif 106
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 16
Similarity score: 0.103791

Alignment:
ATTGGTGTATTTACAATCCC
----TTTGGTGCACCCATCA

Original motif     Consensus sequence: ATTGGTGTATTTACAATCCC Reverse complement motif     Consensus sequence: GGGATTGTAAATACACCAAT


Dataset #: 1 Motif ID: 290 Motif name: Motif 290

Original motif     Consensus sequence: TGATACCCAGGCAAACAG Reverse complement motif     Consensus sequence: CTGTTTGCCTGGGTATCA

Best Matches for Motif ID 290 (Highest to Lowest)

Dataset #: 1
Motif ID: 170
Motif name: Motif 170
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 18
Similarity score: 0.0975901

Alignment:
AATCAACCCTGGYRATCAAT
-TGATACCCAGGCAAACAG-

Original motif     Consensus sequence: AATCAACCCTGGYRATCAAT Reverse complement motif     Consensus sequence: ATTGATMKCCAGGGTTGATT


Dataset #: 1
Motif ID: 67
Motif name: Motif 67
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 18
Similarity score: 0.0999158

Alignment:
CTGGGCTCCTGAGTCTGGTG
--CTGTTTGCCTGGGTATCA

Original motif     Consensus sequence: CTGGGCTCCTGAGTCTGGTG Reverse complement motif     Consensus sequence: CACCAGACTCAGGAGCCCAG


Dataset #: 1 Motif ID: 291 Motif name: Motif 291

Original motif     Consensus sequence: CTGAGGACCTGAGGTCRTA Reverse complement motif     Consensus sequence: TAMGACCTCAGGTCCTCAG

Best Matches for Motif ID 291 (Highest to Lowest)

Dataset #: 1
Motif ID: 63
Motif name: Motif 63
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 19
Similarity score: 0.0928513

Alignment:
AAAMAMMKMATGTTCTCACT
TAMGACCTCAGGTCCTCAG-

Original motif     Consensus sequence: AGTGAGAACATRYRRTRTTT Reverse complement motif     Consensus sequence: AAAMAMMKMATGTTCTCACT


Dataset #: 1
Motif ID: 99
Motif name: Motif 99
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 0.0929924

Alignment:
GCAAAKGACATGATYTCATT
-CTGAGGACCTGAGGTCRTA

Original motif     Consensus sequence: GCAAAKGACATGATYTCATT Reverse complement motif     Consensus sequence: AATGAKATCATGTCYTTTGC


Dataset #: 1 Motif ID: 292 Motif name: Motif 292

Original motif     Consensus sequence: AAGACCTTCCAGTGGGACAA Reverse complement motif     Consensus sequence: TTGTCCCACTGGAAGGTCTT

Best Matches for Motif ID 292 (Highest to Lowest)

Dataset #: 1
Motif ID: 179
Motif name: Motif 179
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.094932

Alignment:
GAATACCTCCTGAAGGACCT
TTGTCCCACTGGAAGGTCTT

Original motif     Consensus sequence: AGGTCCTTCAGGAGGTATTC Reverse complement motif     Consensus sequence: GAATACCTCCTGAAGGACCT


Dataset #: 1
Motif ID: 119
Motif name: Motif 119
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.106872

Alignment:
KKCACCTTGATCTTGGACTT
AAGACCTTCCAGTGGGACAA

Original motif     Consensus sequence: AAGTCCAAGATCAAGGTGYY Reverse complement motif     Consensus sequence: KKCACCTTGATCTTGGACTT


Dataset #: 1 Motif ID: 293 Motif name: Motif 293

Original motif     Consensus sequence: CTGACTGGGAGACACCTCCC Reverse complement motif     Consensus sequence: GGGAGGTGTCTCCCAGTCAG

Best Matches for Motif ID 293 (Highest to Lowest)

Dataset #: 1
Motif ID: 262
Motif name: Motif 262
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.106264

Alignment:
CTCAGTGTTAATCTCCTGTC
CTGACTGGGAGACACCTCCC

Original motif     Consensus sequence: CTCAGTGTTAATCTCCTGTC Reverse complement motif     Consensus sequence: GACAGGAGATTAACACTGAG


Dataset #: 1
Motif ID: 16
Motif name: Motif 16
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.115344

Alignment:
GAAAGGGAACTCCCTGACCC
GGGAGGTGTCTCCCAGTCAG

Original motif     Consensus sequence: GAAAGGGAACTCCCTGACCC Reverse complement motif     Consensus sequence: GGGTCAGGGAGTTCCCTTTC


Dataset #: 1 Motif ID: 294 Motif name: Motif 294

Original motif     Consensus sequence: AGCTGTGAGAAGAGGGCCAC Reverse complement motif     Consensus sequence: GTGGCCCTCTTCTCACAGCT

Best Matches for Motif ID 294 (Highest to Lowest)

Dataset #: 1
Motif ID: 201
Motif name: Motif 201
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.113168

Alignment:
ACCKTCGCGGTGAGTGTTAC
AGCTGTGAGAAGAGGGCCAC

Original motif     Consensus sequence: GTAACACTCACCGCGARGGT Reverse complement motif     Consensus sequence: ACCKTCGCGGTGAGTGTTAC


Dataset #: 1
Motif ID: 112
Motif name: Motif 112
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 0.591581

Alignment:
CTTGCCCAAGGTCACACAGC-
-GTGGCCCTCTTCTCACAGCT

Original motif     Consensus sequence: GCTGTGTGACCTTGGGCAAG Reverse complement motif     Consensus sequence: CTTGCCCAAGGTCACACAGC


Dataset #: 1 Motif ID: 295 Motif name: Motif 295

Original motif     Consensus sequence: CCCCGCCCC Reverse complement motif     Consensus sequence: GGGGCGGGG

Best Matches for Motif ID 295 (Highest to Lowest)

Dataset #: 1
Motif ID: 78
Motif name: Motif 78
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 9
Similarity score: 0.02574

Alignment:
CGAGCCCTGCCCCGCGG
----CCCCGCCCC----

Original motif     Consensus sequence: CGAGCCCTGCCCCGCGG Reverse complement motif     Consensus sequence: CCGCGGGGCAGGGCTCG


Dataset #: 1
Motif ID: 250
Motif name: Motif 250
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 9
Similarity score: 0.0380756

Alignment:
GGAGCGGTGG
GGGGCGGGG-

Original motif     Consensus sequence: CCACCGCTCC Reverse complement motif     Consensus sequence: GGAGCGGTGG


Dataset #: 1 Motif ID: 296 Motif name: Motif 296

Original motif     Consensus sequence: CCACGTGG Reverse complement motif     Consensus sequence: CCACGTGG

Best Matches for Motif ID 296 (Highest to Lowest)

Dataset #: 1
Motif ID: 120
Motif name: Motif 120
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 8
Similarity score: 0.0506234

Alignment:
CCATGTGSTCCC
CCACGTGG----

Original motif     Consensus sequence: CCATGTGSTCCC Reverse complement motif     Consensus sequence: GGGASCACATGG


Dataset #: 1
Motif ID: 61
Motif name: Motif 61
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 5
Number of overlap: 8
Similarity score: 0.0551535

Alignment:
GGATCCACTGGGTGAAGCCA
--------CCACGTGG----

Original motif     Consensus sequence: GGATCCACTGGGTGAAGCCA Reverse complement motif     Consensus sequence: TGGCTTCACCCAGTGGATCC


Dataset #: 1 Motif ID: 297 Motif name: Motif 297

Original motif     Consensus sequence: ACCAATCAGCA Reverse complement motif     Consensus sequence: TGCTGATTGGT

Best Matches for Motif ID 297 (Highest to Lowest)

Dataset #: 1
Motif ID: 261
Motif name: Motif 261
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 11
Similarity score: 0.0606967

Alignment:
TAGTGGTGATTTSTGAGAT
---TGCTGATTGGT-----

Original motif     Consensus sequence: ATCTCASAAATCACCACTA Reverse complement motif     Consensus sequence: TAGTGGTGATTTSTGAGAT


Dataset #: 1
Motif ID: 336
Motif name: Motif 336
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 11
Similarity score: 0.0632904

Alignment:
CAGGTGGTKTTTGGTTACAT
----TGCTGATTGGT-----

Original motif     Consensus sequence: ATGTAACCAAAYACCACCTG Reverse complement motif     Consensus sequence: CAGGTGGTKTTTGGTTACAT


Dataset #: 1 Motif ID: 298 Motif name: Motif 298

Original motif     Consensus sequence: ATAGAGGAGGACC Reverse complement motif     Consensus sequence: GGTCCTCCTCTAT

Best Matches for Motif ID 298 (Highest to Lowest)

Dataset #: 1
Motif ID: 260
Motif name: Motif 260
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 13
Similarity score: 0.0631665

Alignment:
GGTGCCCCTCTGGGACRAA
------GGTCCTCCTCTAT

Original motif     Consensus sequence: GGTGCCCCTCTGGGACRAA Reverse complement motif     Consensus sequence: TTMGTCCCAGAGGGGCACC


Dataset #: 1
Motif ID: 294
Motif name: Motif 294
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 6
Number of overlap: 13
Similarity score: 0.0642679

Alignment:
AGCTGTGAGAAGAGGGCCAC
-----ATAGAGGAGGACC--

Original motif     Consensus sequence: AGCTGTGAGAAGAGGGCCAC Reverse complement motif     Consensus sequence: GTGGCCCTCTTCTCACAGCT


Dataset #: 1 Motif ID: 299 Motif name: Motif 299

Original motif     Consensus sequence: CCCTGCTAGAACCTCCAA Reverse complement motif     Consensus sequence: TTGGAGGTTCTAGCAGGG

Best Matches for Motif ID 299 (Highest to Lowest)

Dataset #: 1
Motif ID: 26
Motif name: Motif 26
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 18
Similarity score: 0.0856135

Alignment:
CTCCTGCCTCAGCCTCCCRA
-CCCTGCTAGAACCTCCAA-

Original motif     Consensus sequence: CTCCTGCCTCAGCCTCCCRA Reverse complement motif     Consensus sequence: TMGGGAGGCTGAGGCAGGAG


Dataset #: 1
Motif ID: 178
Motif name: Motif 178
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 18
Similarity score: 0.097377

Alignment:
ATGTGGAGGTGGAAGACAGT
--TTGGAGGTTCTAGCAGGG

Original motif     Consensus sequence: ACTGTCTTCCACCTCCACAT Reverse complement motif     Consensus sequence: ATGTGGAGGTGGAAGACAGT


Dataset #: 1 Motif ID: 300 Motif name: Motif 300

Original motif     Consensus sequence: CATTTTACAGA Reverse complement motif     Consensus sequence: TCTGTAAAATG

Best Matches for Motif ID 300 (Highest to Lowest)

Dataset #: 1
Motif ID: 45
Motif name: Motif 45
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0501861

Alignment:
CACTTTCCAGACTGGGCA
-------CATTTTACAGA

Original motif     Consensus sequence: TGCCCAGTCTGGAAAGTG Reverse complement motif     Consensus sequence: CACTTTCCAGACTGGGCA


Dataset #: 1
Motif ID: 233
Motif name: Motif 233
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 11
Similarity score: 0.071946

Alignment:
GTTAACTGTAAAACAGCCT
----TCTGTAAAATG----

Original motif     Consensus sequence: GTTAACTGTAAAACAGCCT Reverse complement motif     Consensus sequence: AGGCTGTTTTACAGTTAAC


Dataset #: 1 Motif ID: 301 Motif name: Motif 301

Original motif     Consensus sequence: CCAAGACYCCAGAC Reverse complement motif     Consensus sequence: GTCTGGMGTCTTGG

Best Matches for Motif ID 301 (Highest to Lowest)

Dataset #: 1
Motif ID: 309
Motif name: Motif 309
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 14
Similarity score: 0.0547706

Alignment:
MTCCTCCAGACCCCAGAATG
----CCAAGACYCCAGAC--

Original motif     Consensus sequence: CATTCTGGGGTCTGGAGGAY Reverse complement motif     Consensus sequence: MTCCTCCAGACCCCAGAATG


Dataset #: 1
Motif ID: 280
Motif name: Motif 280
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0659934

Alignment:
CCTAGATTTCAGARGATGT
CCAAGACYCCAGAC-----

Original motif     Consensus sequence: CCTAGATTTCAGARGATGT Reverse complement motif     Consensus sequence: ACATCMTCTGAAATCTAGG


Dataset #: 1 Motif ID: 302 Motif name: Motif 302

Original motif     Consensus sequence: GACCCTGAGAGC Reverse complement motif     Consensus sequence: GCTCTCAGGGTC

Best Matches for Motif ID 302 (Highest to Lowest)

Dataset #: 1
Motif ID: 340
Motif name: Motif 340
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.0268873

Alignment:
GACCCAGAGAGC
GACCCTGAGAGC

Original motif     Consensus sequence: GACCCAGAGAGC Reverse complement motif     Consensus sequence: GCTCTCTGGGTC


Dataset #: 1
Motif ID: 362
Motif name: Motif 362
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.0423209

Alignment:
GGACCTTCAGAGC
-GACCCTGAGAGC

Original motif     Consensus sequence: GCTCTGAAGGTCC Reverse complement motif     Consensus sequence: GGACCTTCAGAGC


Dataset #: 1 Motif ID: 303 Motif name: Motif 303

Original motif     Consensus sequence: AGTTCTTAAAGATGGT Reverse complement motif     Consensus sequence: ACCATCTTTAAGAACT

Best Matches for Motif ID 303 (Highest to Lowest)

Dataset #: 1
Motif ID: 179
Motif name: Motif 179
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 16
Similarity score: 0.0731282

Alignment:
GAATACCTCCTGAAGGACCT
----ACCATCTTTAAGAACT

Original motif     Consensus sequence: AGGTCCTTCAGGAGGTATTC Reverse complement motif     Consensus sequence: GAATACCTCCTGAAGGACCT


Dataset #: 1
Motif ID: 190
Motif name: Motif 190
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 16
Similarity score: 0.0867922

Alignment:
ATCATTCTTATGCCTTTG
ACCATCTTTAAGAACT--

Original motif     Consensus sequence: CAAAGGCATAAGAATGAT Reverse complement motif     Consensus sequence: ATCATTCTTATGCCTTTG


Dataset #: 1 Motif ID: 304 Motif name: Motif 304

Original motif     Consensus sequence: AGTGTTTCCAAMCTGCT Reverse complement motif     Consensus sequence: AGCAGYTTGGAAACACT

Best Matches for Motif ID 304 (Highest to Lowest)

Dataset #: 1
Motif ID: 139
Motif name: Motif 139
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 17
Similarity score: 0.0916595

Alignment:
AWTKKTGGTTKCCAGKGGCT
AGTGTTTCCAAMCTGCT---

Original motif     Consensus sequence: AGCCYCTGGYAACCAYYAWT Reverse complement motif     Consensus sequence: AWTKKTGGTTKCCAGKGGCT


Dataset #: 1
Motif ID: 178
Motif name: Motif 178
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 17
Similarity score: 0.0916702

Alignment:
ACTGTCTTCCACCTCCACAT
AGTGTTTCCAAMCTGCT---

Original motif     Consensus sequence: ACTGTCTTCCACCTCCACAT Reverse complement motif     Consensus sequence: ATGTGGAGGTGGAAGACAGT


Dataset #: 1 Motif ID: 305 Motif name: Motif 305

Original motif     Consensus sequence: AATGACCAATTGAGAGC Reverse complement motif     Consensus sequence: GCTCTCAATTGGTCATT

Best Matches for Motif ID 305 (Highest to Lowest)

Dataset #: 1
Motif ID: 332
Motif name: Motif 332
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 17
Similarity score: 0.0848872

Alignment:
GTTTAACCATTGAGGGCCAG
AATGACCAATTGAGAGC---

Original motif     Consensus sequence: CTGGCCCTCAATGGTTAAAC Reverse complement motif     Consensus sequence: GTTTAACCATTGAGGGCCAG


Dataset #: 1
Motif ID: 170
Motif name: Motif 170
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 17
Similarity score: 0.0979755

Alignment:
ATTGATMKCCAGGGTTGATT
---GCTCTCAATTGGTCATT

Original motif     Consensus sequence: AATCAACCCTGGYRATCAAT Reverse complement motif     Consensus sequence: ATTGATMKCCAGGGTTGATT


Dataset #: 1 Motif ID: 306 Motif name: Motif 306

Original motif     Consensus sequence: GACATGAGCTGGCGCTTG Reverse complement motif     Consensus sequence: CAAGCGCCAGCTCATGTC

Best Matches for Motif ID 306 (Highest to Lowest)

Dataset #: 1
Motif ID: 333
Motif name: Motif 333
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 18
Similarity score: 0.102628

Alignment:
AAAGCTGGAGCTATTATCTA
CAAGCGCCAGCTCATGTC--

Original motif     Consensus sequence: TAGATAATAGCTCCAGCTTT Reverse complement motif     Consensus sequence: AAAGCTGGAGCTATTATCTA


Dataset #: 1
Motif ID: 262
Motif name: Motif 262
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 18
Similarity score: 0.107908

Alignment:
GACAGGAGATTAACACTGAG
--GACATGAGCTGGCGCTTG

Original motif     Consensus sequence: CTCAGTGTTAATCTCCTGTC Reverse complement motif     Consensus sequence: GACAGGAGATTAACACTGAG


Dataset #: 1 Motif ID: 307 Motif name: Motif 307

Original motif     Consensus sequence: AGATGCCAGCCAGAGCTCT Reverse complement motif     Consensus sequence: AGAGCTCTGGCTGGCATCT

Best Matches for Motif ID 307 (Highest to Lowest)

Dataset #: 1
Motif ID: 48
Motif name: Motif 48
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 19
Similarity score: 0.0871974

Alignment:
AGCTCCCAGCGTGAGCGACG
AGATGCCAGCCAGAGCTCT-

Original motif     Consensus sequence: AGCTCCCAGCGTGAGCGACG Reverse complement motif     Consensus sequence: CGTCGCTCACGCTGGGAGCT


Dataset #: 1
Motif ID: 333
Motif name: Motif 333
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 19
Similarity score: 0.0921664

Alignment:
AAAGCTGGAGCTATTATCTA
AGAGCTCTGGCTGGCATCT-

Original motif     Consensus sequence: TAGATAATAGCTCCAGCTTT Reverse complement motif     Consensus sequence: AAAGCTGGAGCTATTATCTA


Dataset #: 1 Motif ID: 308 Motif name: Motif 308

Original motif     Consensus sequence: AAATTAGGCCAATTAATAAC Reverse complement motif     Consensus sequence: GTTATTAATTGGCCTAATTT

Best Matches for Motif ID 308 (Highest to Lowest)

Dataset #: 1
Motif ID: 83
Motif name: Motif 83
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.109629

Alignment:
GTKTMTATMTACCACATTTT
GTTATTAATTGGCCTAATTT

Original motif     Consensus sequence: AAAATGTGGTAYATAYAYAC Reverse complement motif     Consensus sequence: GTKTMTATMTACCACATTTT


Dataset #: 1
Motif ID: 254
Motif name: Motif 254
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 19
Similarity score: 0.593176

Alignment:
-ATAGGAATGCTTGTGATTTT
GTTATTAATTGGCCTAATTT-

Original motif     Consensus sequence: AAAATCACAAGCATTCCTAT Reverse complement motif     Consensus sequence: ATAGGAATGCTTGTGATTTT


Dataset #: 1 Motif ID: 309 Motif name: Motif 309

Original motif     Consensus sequence: CATTCTGGGGTCTGGAGGAY Reverse complement motif     Consensus sequence: MTCCTCCAGACCCCAGAATG

Best Matches for Motif ID 309 (Highest to Lowest)

Dataset #: 1
Motif ID: 171
Motif name: Motif 171
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 0.0981972

Alignment:
ACTTTGGACTGTGGACTTTT-
-CATTCTGGGGTCTGGAGGAY

Original motif     Consensus sequence: AAAAGTCCACAGTCCAAAGT Reverse complement motif     Consensus sequence: ACTTTGGACTGTGGACTTTT


Dataset #: 1
Motif ID: 122
Motif name: Motif 122
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 19
Similarity score: 0.102502

Alignment:
CCTTGGCCAGCCCAGAAAG-
MTCCTCCAGACCCCAGAATG

Original motif     Consensus sequence: CCTTGGCCAGCCCAGAAAG Reverse complement motif     Consensus sequence: CTTTCTGGGCTGGCCAAGG


Dataset #: 1 Motif ID: 310 Motif name: Motif 310

Original motif     Consensus sequence: CCCATGCAAGTCYRAAATCC Reverse complement motif     Consensus sequence: GGATTTMKGACTTGCATGGG

Best Matches for Motif ID 310 (Highest to Lowest)

Dataset #: 1
Motif ID: 225
Motif name: Motif 225
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 19
Similarity score: 0.0916027

Alignment:
-AAGTTCTKGGKTACATGTGC
GGATTTMKGACTTGCATGGG-

Original motif     Consensus sequence: GCACATGTAYCCYAGAACTT Reverse complement motif     Consensus sequence: AAGTTCTKGGKTACATGTGC


Dataset #: 1
Motif ID: 307
Motif name: Motif 307
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 19
Similarity score: 0.0934682

Alignment:
AGAGCTCTGGCTGGCATCT-
GGATTTMKGACTTGCATGGG

Original motif     Consensus sequence: AGATGCCAGCCAGAGCTCT Reverse complement motif     Consensus sequence: AGAGCTCTGGCTGGCATCT


Dataset #: 1 Motif ID: 311 Motif name: Motif 311

Original motif     Consensus sequence: GGCATCACGGATCCTACCAA Reverse complement motif     Consensus sequence: TTGGTAGGATCCGTGATGCC

Best Matches for Motif ID 311 (Highest to Lowest)

Dataset #: 1
Motif ID: 61
Motif name: Motif 61
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 19
Similarity score: 0.113575

Alignment:
-TGGCTTCACCCAGTGGATCC
GGCATCACGGATCCTACCAA-

Original motif     Consensus sequence: GGATCCACTGGGTGAAGCCA Reverse complement motif     Consensus sequence: TGGCTTCACCCAGTGGATCC


Dataset #: 1
Motif ID: 211
Motif name: Motif 211
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 19
Similarity score: 0.118597

Alignment:
GACTTCAAGAATGAAGCCG-
GGCATCACGGATCCTACCAA

Original motif     Consensus sequence: GACTTCAAGAATGAAGCCG Reverse complement motif     Consensus sequence: CGGCTTCATTCTTGAAGTC


Dataset #: 1 Motif ID: 312 Motif name: Motif 312

Original motif     Consensus sequence: AGGACTGAGGGTGCCYRGGG Reverse complement motif     Consensus sequence: CCCMKGGCACCCTCAGTCCT

Best Matches for Motif ID 312 (Highest to Lowest)

Dataset #: 1
Motif ID: 48
Motif name: Motif 48
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.104551

Alignment:
CGTCGCTCACGCTGGGAGCT
CCCMKGGCACCCTCAGTCCT

Original motif     Consensus sequence: AGCTCCCAGCGTGAGCGACG Reverse complement motif     Consensus sequence: CGTCGCTCACGCTGGGAGCT


Dataset #: 1
Motif ID: 176
Motif name: Motif 176
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.105418

Alignment:
AACAACASACACTGGGGCCT
CCCMKGGCACCCTCAGTCCT

Original motif     Consensus sequence: AGGCCCCAGTGTSTGTTGTT Reverse complement motif     Consensus sequence: AACAACASACACTGGGGCCT


Dataset #: 1 Motif ID: 313 Motif name: Motif 313

Original motif     Consensus sequence: CTCCTGCCTCAGCY Reverse complement motif     Consensus sequence: MGCTGAGGCAGGAG

Best Matches for Motif ID 313 (Highest to Lowest)

Dataset #: 1
Motif ID: 26
Motif name: Motif 26
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 7
Number of overlap: 14
Similarity score: 0.0298178

Alignment:
CTCCTGCCTCAGCCTCCCRA
CTCCTGCCTCAGCY------

Original motif     Consensus sequence: CTCCTGCCTCAGCCTCCCRA Reverse complement motif     Consensus sequence: TMGGGAGGCTGAGGCAGGAG


Dataset #: 1
Motif ID: 96
Motif name: Motif 96
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 14
Similarity score: 0.0599095

Alignment:
AAGCTGAGGGAGCCGGCTCC
-----MGCTGAGGCAGGAG-

Original motif     Consensus sequence: AAGCTGAGGGAGCCGGCTCC Reverse complement motif     Consensus sequence: GGAGCCGGCTCCCTCAGCTT


Dataset #: 1 Motif ID: 314 Motif name: Motif 314

Original motif     Consensus sequence: GGAACGCACAT Reverse complement motif     Consensus sequence: ATGTGCGTTCC

Best Matches for Motif ID 314 (Highest to Lowest)

Dataset #: 1
Motif ID: 240
Motif name: Motif 240
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.0430601

Alignment:
ATGTGCWGTCCC
-ATGTGCGTTCC

Original motif     Consensus sequence: ATGTGCWGTCCC Reverse complement motif     Consensus sequence: GGGACWGCACAT


Dataset #: 1
Motif ID: 312
Motif name: Motif 312
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 6
Number of overlap: 11
Similarity score: 0.0705974

Alignment:
AGGACTGAGGGTGCCYRGGG
-----ATGTGCGTTCC----

Original motif     Consensus sequence: AGGACTGAGGGTGCCYRGGG Reverse complement motif     Consensus sequence: CCCMKGGCACCCTCAGTCCT


Dataset #: 1 Motif ID: 315 Motif name: Motif 315

Original motif     Consensus sequence: CCAAACCATATCA Reverse complement motif     Consensus sequence: TGATATGGTTTGG

Best Matches for Motif ID 315 (Highest to Lowest)

Dataset #: 1
Motif ID: 169
Motif name: Motif 169
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 13
Similarity score: 0.0520963

Alignment:
TTTTATAGGATTTGGG
--TGATATGGTTTGG-

Original motif     Consensus sequence: CCCAAATCCTATAAAA Reverse complement motif     Consensus sequence: TTTTATAGGATTTGGG


Dataset #: 1
Motif ID: 227
Motif name: Motif 227
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 13
Similarity score: 0.0822582

Alignment:
CCCAAATCTCATSTTGAAT
-CCAAACCATATCA-----

Original motif     Consensus sequence: CCCAAATCTCATSTTGAAT Reverse complement motif     Consensus sequence: ATTCAASATGAGATTTGGG


Dataset #: 1 Motif ID: 316 Motif name: Motif 316

Original motif     Consensus sequence: CGGAAGTGACGT Reverse complement motif     Consensus sequence: ACGTCACTTCCG

Best Matches for Motif ID 316 (Highest to Lowest)

Dataset #: 1
Motif ID: 136
Motif name: Motif 136
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.0580654

Alignment:
CCCCGGGCAGTGAGGG
CGGAAGTGACGT----

Original motif     Consensus sequence: CCCTCACTGCCCGGGG Reverse complement motif     Consensus sequence: CCCCGGGCAGTGAGGG


Dataset #: 1
Motif ID: 247
Motif name: Motif 247
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.0581297

Alignment:
GKGGCAGTGAGGC
CGGAAGTGACGT-

Original motif     Consensus sequence: GCCTCACTGCCRC Reverse complement motif     Consensus sequence: GKGGCAGTGAGGC


Dataset #: 1 Motif ID: 317 Motif name: Motif 317

Original motif     Consensus sequence: ACATGCTACAACAT Reverse complement motif     Consensus sequence: ATGTTGTAGCATGT

Best Matches for Motif ID 317 (Highest to Lowest)

Dataset #: 1
Motif ID: 299
Motif name: Motif 299
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 5
Number of overlap: 14
Similarity score: 0.0691153

Alignment:
TTGGAGGTTCTAGCAGGG
----ATGTTGTAGCATGT

Original motif     Consensus sequence: CCCTGCTAGAACCTCCAA Reverse complement motif     Consensus sequence: TTGGAGGTTCTAGCAGGG


Dataset #: 1
Motif ID: 36
Motif name: Motif 36
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0828209

Alignment:
CGCCCATCGTCTGGGATGT
-----ATGTTGTAGCATGT

Original motif     Consensus sequence: ACATCCCAGACGATGGGCG Reverse complement motif     Consensus sequence: CGCCCATCGTCTGGGATGT


Dataset #: 1 Motif ID: 318 Motif name: Motif 318

Original motif     Consensus sequence: CAGCCCCG Reverse complement motif     Consensus sequence: CGGGGCTG

Best Matches for Motif ID 318 (Highest to Lowest)

Dataset #: 1
Motif ID: 88
Motif name: Motif 88
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.00509921

Alignment:
ACCGGGGCTGCA
--CGGGGCTG--

Original motif     Consensus sequence: ACCGGGGCTGCA Reverse complement motif     Consensus sequence: TGCAGCCCCGGT


Dataset #: 1
Motif ID: 183
Motif name: Motif 183
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.0248687

Alignment:
GCCRGCCCTGCYGGCC
--CAGCCCCG------

Original motif     Consensus sequence: GCCRGCCCTGCYGGCC Reverse complement motif     Consensus sequence: GGCCMGCAGGGCKGGC


Dataset #: 1 Motif ID: 319 Motif name: Motif 319

Original motif     Consensus sequence: TAGTTTTTAACAA Reverse complement motif     Consensus sequence: TTGTTAAAAACTA

Best Matches for Motif ID 319 (Highest to Lowest)

Dataset #: 1
Motif ID: 154
Motif name: Motif 154
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 13
Similarity score: 0.0753436

Alignment:
CATTAGATTCTCATAGGA
---TAGTTTTTAACAA--

Original motif     Consensus sequence: CATTAGATTCTCATAGGA Reverse complement motif     Consensus sequence: TCCTATGAGAATCTAATG


Dataset #: 1
Motif ID: 243
Motif name: Motif 243
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 13
Similarity score: 0.0843202

Alignment:
TTGAGAACCACTG
TTGTTAAAAACTA

Original motif     Consensus sequence: CAGTGGTTCTCAA Reverse complement motif     Consensus sequence: TTGAGAACCACTG


Dataset #: 1 Motif ID: 320 Motif name: Motif 320

Original motif     Consensus sequence: CATCTGGAGCCCCA Reverse complement motif     Consensus sequence: TGGGGCTCCAGATG

Best Matches for Motif ID 320 (Highest to Lowest)

Dataset #: 1
Motif ID: 205
Motif name: Motif 205
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.057175

Alignment:
CATCTGGCAGCCCA
CATCTGGAGCCCCA

Original motif     Consensus sequence: CATCTGGCAGCCCA Reverse complement motif     Consensus sequence: TGGGCTGCCAGATG


Dataset #: 1
Motif ID: 284
Motif name: Motif 284
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.071304

Alignment:
CATTTGGGAGCCCATTGA
CATCTGGAGCCCCA----

Original motif     Consensus sequence: CATTTGGGAGCCCATTGA Reverse complement motif     Consensus sequence: TCAATGGGCTCCCAAATG


Dataset #: 1 Motif ID: 321 Motif name: Motif 321

Original motif     Consensus sequence: AAGCTCGAACTGGGTGGAGC Reverse complement motif     Consensus sequence: GCTCCACCCAGTTCGAGCTT

Best Matches for Motif ID 321 (Highest to Lowest)

Dataset #: 1
Motif ID: 201
Motif name: Motif 201
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.114862

Alignment:
ACCKTCGCGGTGAGTGTTAC
AAGCTCGAACTGGGTGGAGC

Original motif     Consensus sequence: GTAACACTCACCGCGARGGT Reverse complement motif     Consensus sequence: ACCKTCGCGGTGAGTGTTAC


Dataset #: 1
Motif ID: 160
Motif name: Motif 160
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.117485

Alignment:
AAATTACCCAGTCTCAGGTA
GCTCCACCCAGTTCGAGCTT

Original motif     Consensus sequence: AAATTACCCAGTCTCAGGTA Reverse complement motif     Consensus sequence: TACCTGAGACTGGGTAATTT


Dataset #: 1 Motif ID: 322 Motif name: Motif 322

Original motif     Consensus sequence: AGGGCCTTTGCASWTGC Reverse complement motif     Consensus sequence: GCAWSTGCAAAGGCCCT

Best Matches for Motif ID 322 (Highest to Lowest)

Dataset #: 1
Motif ID: 196
Motif name: Motif 196
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 17
Similarity score: 0.0779611

Alignment:
CAAGCCTSKGCAATGGCAGG
---GCAWSTGCAAAGGCCCT

Original motif     Consensus sequence: CCTGCCATTGCYSAGGCTTG Reverse complement motif     Consensus sequence: CAAGCCTSKGCAATGGCAGG


Dataset #: 1
Motif ID: 171
Motif name: Motif 171
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 17
Similarity score: 0.0904024

Alignment:
ACTTTGGACTGTGGACTTTT
AGGGCCTTTGCASWTGC---

Original motif     Consensus sequence: AAAAGTCCACAGTCCAAAGT Reverse complement motif     Consensus sequence: ACTTTGGACTGTGGACTTTT


Dataset #: 1 Motif ID: 323 Motif name: Motif 323

Original motif     Consensus sequence: GCTCTCAGGTCCA Reverse complement motif     Consensus sequence: TGGACCTGAGAGC

Best Matches for Motif ID 323 (Highest to Lowest)

Dataset #: 1
Motif ID: 291
Motif name: Motif 291
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 13
Similarity score: 0.0533584

Alignment:
CTGAGGACCTGAGGTCRTA
---TGGACCTGAGAGC---

Original motif     Consensus sequence: CTGAGGACCTGAGGTCRTA Reverse complement motif     Consensus sequence: TAMGACCTCAGGTCCTCAG


Dataset #: 1
Motif ID: 52
Motif name: Motif 52
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 6
Number of overlap: 13
Similarity score: 0.0809407

Alignment:
GACTGGCAGGCAGCTCCACC
-----GCTCTCAGGTCCA--

Original motif     Consensus sequence: GACTGGCAGGCAGCTCCACC Reverse complement motif     Consensus sequence: GGTGGAGCTGCCTGCCAGTC


Dataset #: 1 Motif ID: 324 Motif name: Motif 324

Original motif     Consensus sequence: ACGCACCTGTA Reverse complement motif     Consensus sequence: TACAGGTGCGT

Best Matches for Motif ID 324 (Highest to Lowest)

Dataset #: 1
Motif ID: 355
Motif name: Motif 355
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.0752538

Alignment:
TATGAGCCTGTAA
-ACGCACCTGTA-

Original motif     Consensus sequence: TATGAGCCTGTAA Reverse complement motif     Consensus sequence: TTACAGGCTCATA


Dataset #: 1
Motif ID: 167
Motif name: Motif 167
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0802613

Alignment:
CCGCTCCTGTGC
ACGCACCTGTA-

Original motif     Consensus sequence: CCGCTCCTGTGC Reverse complement motif     Consensus sequence: GCACAGGAGCGG


Dataset #: 1 Motif ID: 325 Motif name: Motif 325

Original motif     Consensus sequence: AGCAGCTGTAAATA Reverse complement motif     Consensus sequence: TATTTACAGCTGCT

Best Matches for Motif ID 325 (Highest to Lowest)

Dataset #: 1
Motif ID: 25
Motif name: Motif 25
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.087674

Alignment:
GTACCTCAGWTGGAAATG
AGCAGCTGTAAATA----

Original motif     Consensus sequence: CATTTCCAWCTGAGGTAC Reverse complement motif     Consensus sequence: GTACCTCAGWTGGAAATG


Dataset #: 1
Motif ID: 303
Motif name: Motif 303
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0891021

Alignment:
AGTTCTTAAAGATGGT
TATTTACAGCTGCT--

Original motif     Consensus sequence: AGTTCTTAAAGATGGT Reverse complement motif     Consensus sequence: ACCATCTTTAAGAACT


Dataset #: 1 Motif ID: 326 Motif name: Motif 326

Original motif     Consensus sequence: GACATGGAGTCAAAGG Reverse complement motif     Consensus sequence: CCTTTGACTCCATGTC

Best Matches for Motif ID 326 (Highest to Lowest)

Dataset #: 1
Motif ID: 105
Motif name: Motif 105
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 16
Similarity score: 0.0861073

Alignment:
GGAGGTGTGGAGGGAGAGGC
-GACATGGAGTCAAAGG---

Original motif     Consensus sequence: GCCTCTCCCTCCACACCTCC Reverse complement motif     Consensus sequence: GGAGGTGTGGAGGGAGAGGC


Dataset #: 1
Motif ID: 290
Motif name: Motif 290
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 16
Similarity score: 0.0886417

Alignment:
TGATACCCAGGCAAACAG
-GACATGGAGTCAAAGG-

Original motif     Consensus sequence: TGATACCCAGGCAAACAG Reverse complement motif     Consensus sequence: CTGTTTGCCTGGGTATCA


Dataset #: 1 Motif ID: 327 Motif name: Motif 327

Original motif     Consensus sequence: AGGAGGAAGTCAATTTC Reverse complement motif     Consensus sequence: GAAATTGACTTCCTCCT

Best Matches for Motif ID 327 (Highest to Lowest)

Dataset #: 1
Motif ID: 85
Motif name: Motif 85
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 17
Similarity score: 0.087633

Alignment:
CTAGACATAAAGGTTCTCCA
GAAATTGACTTCCTCCT---

Original motif     Consensus sequence: CTAGACATAAAGGTTCTCCA Reverse complement motif     Consensus sequence: TGGAGAACCTTTATGTCTAG


Dataset #: 1
Motif ID: 328
Motif name: Motif 328
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 17
Similarity score: 0.0921863

Alignment:
KACATTGATTTTGTATC
GAAATTGACTTCCTCCT

Original motif     Consensus sequence: GATACAAAATCAATGTR Reverse complement motif     Consensus sequence: KACATTGATTTTGTATC


Dataset #: 1 Motif ID: 328 Motif name: Motif 328

Original motif     Consensus sequence: GATACAAAATCAATGTR Reverse complement motif     Consensus sequence: KACATTGATTTTGTATC

Best Matches for Motif ID 328 (Highest to Lowest)

Dataset #: 1
Motif ID: 119
Motif name: Motif 119
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 17
Similarity score: 0.0460385

Alignment:
AAGTCCAAGATCAAGGTGYY
-GATACAAAATCAATGTR--

Original motif     Consensus sequence: AAGTCCAAGATCAAGGTGYY Reverse complement motif     Consensus sequence: KKCACCTTGATCTTGGACTT


Dataset #: 1
Motif ID: 19
Motif name: Motif 19
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 17
Similarity score: 0.0587823

Alignment:
CACCAGGAGATTATATCCCR
---KACATTGATTTTGTATC

Original motif     Consensus sequence: CACCAGGAGATTATATCCCR Reverse complement motif     Consensus sequence: MGGGATATAATCTCCTGGTG


Dataset #: 1 Motif ID: 329 Motif name: Motif 329

Original motif     Consensus sequence: GGGAGGGATATATTAGC Reverse complement motif     Consensus sequence: GCTAATATATCCCTCCC

Best Matches for Motif ID 329 (Highest to Lowest)

Dataset #: 1
Motif ID: 333
Motif name: Motif 333
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 17
Similarity score: 0.0923491

Alignment:
TAGATAATAGCTCCAGCTTT
--GCTAATATATCCCTCCC-

Original motif     Consensus sequence: TAGATAATAGCTCCAGCTTT Reverse complement motif     Consensus sequence: AAAGCTGGAGCTATTATCTA


Dataset #: 1
Motif ID: 235
Motif name: Motif 235
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 17
Similarity score: 0.102804

Alignment:
GCCAATTTCTCCCATTTGGA
GCTAATATATCCCTCCC---

Original motif     Consensus sequence: TCCAAATGGGAGAAATTGGC Reverse complement motif     Consensus sequence: GCCAATTTCTCCCATTTGGA


Dataset #: 1 Motif ID: 330 Motif name: Motif 330

Original motif     Consensus sequence: AAAACCAGCAAGTTTTTAT Reverse complement motif     Consensus sequence: ATAAAAACTTGCTGGTTTT

Best Matches for Motif ID 330 (Highest to Lowest)

Dataset #: 1
Motif ID: 63
Motif name: Motif 63
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 19
Similarity score: 0.0925249

Alignment:
AGTGAGAACATRYRRTRTTT
ATAAAAACTTGCTGGTTTT-

Original motif     Consensus sequence: AGTGAGAACATRYRRTRTTT Reverse complement motif     Consensus sequence: AAAMAMMKMATGTTCTCACT


Dataset #: 1
Motif ID: 308
Motif name: Motif 308
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 19
Similarity score: 0.112206

Alignment:
AAATTAGGCCAATTAATAAC
AAAACCAGCAAGTTTTTAT-

Original motif     Consensus sequence: AAATTAGGCCAATTAATAAC Reverse complement motif     Consensus sequence: GTTATTAATTGGCCTAATTT


Dataset #: 1 Motif ID: 331 Motif name: Motif 331

Original motif     Consensus sequence: CCACCACAGCTCAAGGAGGC Reverse complement motif     Consensus sequence: GCCTCCTTGAGCTGTGGTGG

Best Matches for Motif ID 331 (Highest to Lowest)

Dataset #: 1
Motif ID: 119
Motif name: Motif 119
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.112645

Alignment:
KKCACCTTGATCTTGGACTT
GCCTCCTTGAGCTGTGGTGG

Original motif     Consensus sequence: AAGTCCAAGATCAAGGTGYY Reverse complement motif     Consensus sequence: KKCACCTTGATCTTGGACTT


Dataset #: 1
Motif ID: 155
Motif name: Motif 155
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.115101

Alignment:
GCCKCCCCGTCCGGGAGGGA
GCCTCCTTGAGCTGTGGTGG

Original motif     Consensus sequence: TCCCTCCCGGACGGGGYGGC Reverse complement motif     Consensus sequence: GCCKCCCCGTCCGGGAGGGA


Dataset #: 1 Motif ID: 332 Motif name: Motif 332

Original motif     Consensus sequence: CTGGCCCTCAATGGTTAAAC Reverse complement motif     Consensus sequence: GTTTAACCATTGAGGGCCAG

Best Matches for Motif ID 332 (Highest to Lowest)

Dataset #: 1
Motif ID: 336
Motif name: Motif 336
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.102201

Alignment:
CAGGTGGTKTTTGGTTACAT
CTGGCCCTCAATGGTTAAAC

Original motif     Consensus sequence: ATGTAACCAAAYACCACCTG Reverse complement motif     Consensus sequence: CAGGTGGTKTTTGGTTACAT


Dataset #: 1
Motif ID: 179
Motif name: Motif 179
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.106854

Alignment:
AGGTCCTTCAGGAGGTATTC
CTGGCCCTCAATGGTTAAAC

Original motif     Consensus sequence: AGGTCCTTCAGGAGGTATTC Reverse complement motif     Consensus sequence: GAATACCTCCTGAAGGACCT


Dataset #: 1 Motif ID: 333 Motif name: Motif 333

Original motif     Consensus sequence: TAGATAATAGCTCCAGCTTT Reverse complement motif     Consensus sequence: AAAGCTGGAGCTATTATCTA

Best Matches for Motif ID 333 (Highest to Lowest)

Dataset #: 1
Motif ID: 106
Motif name: Motif 106
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.0856788

Alignment:
ATTGGTGTATTTACAATCCC
AAAGCTGGAGCTATTATCTA

Original motif     Consensus sequence: ATTGGTGTATTTACAATCCC Reverse complement motif     Consensus sequence: GGGATTGTAAATACACCAAT


Dataset #: 1
Motif ID: 307
Motif name: Motif 307
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 19
Similarity score: 0.562386

Alignment:
AGAGCTCTGGCTGGCATCT-
AAAGCTGGAGCTATTATCTA

Original motif     Consensus sequence: AGATGCCAGCCAGAGCTCT Reverse complement motif     Consensus sequence: AGAGCTCTGGCTGGCATCT


Dataset #: 1 Motif ID: 334 Motif name: Motif 334

Original motif     Consensus sequence: CATCTGTCAC Reverse complement motif     Consensus sequence: GTGACAGATG

Best Matches for Motif ID 334 (Highest to Lowest)

Dataset #: 1
Motif ID: 272
Motif name: Motif 272
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0227273

Alignment:
CAGCTGTCAC
CATCTGTCAC

Original motif     Consensus sequence: CAGCTGTCAC Reverse complement motif     Consensus sequence: GTGACAGCTG


Dataset #: 1
Motif ID: 1
Motif name: Motif 1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.0317788

Alignment:
BCVTCTGTCACCCC
---CATCTGTCAC-

Original motif     Consensus sequence: GGGGTGACAGABGB Reverse complement motif     Consensus sequence: BCVTCTGTCACCCC


Dataset #: 1 Motif ID: 335 Motif name: Motif 335

Original motif     Consensus sequence: GTTAATGCTGA Reverse complement motif     Consensus sequence: TCAGCATTAAC

Best Matches for Motif ID 335 (Highest to Lowest)

Dataset #: 1
Motif ID: 184
Motif name: Motif 184
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 11
Similarity score: 0.054088

Alignment:
ATATTGATGATCCTGACC
-----GTTAATGCTGA--

Original motif     Consensus sequence: ATATTGATGATCCTGACC Reverse complement motif     Consensus sequence: GGTCAGGATCATCAATAT


Dataset #: 1
Motif ID: 262
Motif name: Motif 262
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 9
Number of overlap: 11
Similarity score: 0.0564195

Alignment:
GACAGGAGATTAACACTGAG
-GTTAATGCTGA--------

Original motif     Consensus sequence: CTCAGTGTTAATCTCCTGTC Reverse complement motif     Consensus sequence: GACAGGAGATTAACACTGAG


Dataset #: 1 Motif ID: 336 Motif name: Motif 336

Original motif     Consensus sequence: ATGTAACCAAAYACCACCTG Reverse complement motif     Consensus sequence: CAGGTGGTKTTTGGTTACAT

Best Matches for Motif ID 336 (Highest to Lowest)

Dataset #: 1
Motif ID: 332
Motif name: Motif 332
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.108577

Alignment:
GTTTAACCATTGAGGGCCAG
ATGTAACCAAAYACCACCTG

Original motif     Consensus sequence: CTGGCCCTCAATGGTTAAAC Reverse complement motif     Consensus sequence: GTTTAACCATTGAGGGCCAG


Dataset #: 1
Motif ID: 55
Motif name: Motif 55
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.115891

Alignment:
ATGGCTGAATAKTATTCCAT
CAGGTGGTKTTTGGTTACAT

Original motif     Consensus sequence: ATGGAATAYTATTCAGCCAT Reverse complement motif     Consensus sequence: ATGGCTGAATAKTATTCCAT


Dataset #: 1 Motif ID: 337 Motif name: Motif 337

Original motif     Consensus sequence: AAACTAGAAA Reverse complement motif     Consensus sequence: TTTCTAGTTT

Best Matches for Motif ID 337 (Highest to Lowest)

Dataset #: 1
Motif ID: 195
Motif name: Motif 195
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 7
Number of overlap: 10
Similarity score: 0.0563059

Alignment:
TAAAAGACTACAWATTGGGT
----AAACTAGAAA------

Original motif     Consensus sequence: TAAAAGACTACAWATTGGGT Reverse complement motif     Consensus sequence: ACCCAATWTGTAGTCTTTTA


Dataset #: 1
Motif ID: 330
Motif name: Motif 330
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.0573722

Alignment:
ATAAAAACTTGCTGGTTTT
--------TTTCTAGTTT-

Original motif     Consensus sequence: AAAACCAGCAAGTTTTTAT Reverse complement motif     Consensus sequence: ATAAAAACTTGCTGGTTTT


Dataset #: 1 Motif ID: 338 Motif name: Motif 338

Original motif     Consensus sequence: CTGCAGCC Reverse complement motif     Consensus sequence: GGCTGCAG

Best Matches for Motif ID 338 (Highest to Lowest)

Dataset #: 1
Motif ID: 68
Motif name: Motif 68
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0130204

Alignment:
CATGGCGGGCTGCAGGTC
---GGCTGCAG-------

Original motif     Consensus sequence: CATGGCGGGCTGCAGGTC Reverse complement motif     Consensus sequence: GACCTGCAGCCCGCCATG


Dataset #: 1
Motif ID: 219
Motif name: Motif 219
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0154581

Alignment:
GAGGCTGCAG
--GGCTGCAG

Original motif     Consensus sequence: CTGCAGCCTC Reverse complement motif     Consensus sequence: GAGGCTGCAG


Dataset #: 1 Motif ID: 339 Motif name: Motif 339

Original motif     Consensus sequence: CTCACCTCCTGC Reverse complement motif     Consensus sequence: GCAGGAGGTGAG

Best Matches for Motif ID 339 (Highest to Lowest)

Dataset #: 1
Motif ID: 60
Motif name: Motif 60
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 12
Similarity score: 0.0722162

Alignment:
CTCCTGACCTCGTGATC
--CTCACCTCCTGC---

Original motif     Consensus sequence: GATCACGAGGTCAGGAG Reverse complement motif     Consensus sequence: CTCCTGACCTCGTGATC


Dataset #: 1
Motif ID: 179
Motif name: Motif 179
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 12
Similarity score: 0.0795057

Alignment:
AGGTCCTTCAGGAGGTATTC
-GCAGGAGGTGAG-------

Original motif     Consensus sequence: AGGTCCTTCAGGAGGTATTC Reverse complement motif     Consensus sequence: GAATACCTCCTGAAGGACCT


Dataset #: 1 Motif ID: 340 Motif name: Motif 340

Original motif     Consensus sequence: GACCCAGAGAGC Reverse complement motif     Consensus sequence: GCTCTCTGGGTC

Best Matches for Motif ID 340 (Highest to Lowest)

Dataset #: 1
Motif ID: 302
Motif name: Motif 302
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.0285197

Alignment:
GACCCTGAGAGC
GACCCAGAGAGC

Original motif     Consensus sequence: GACCCTGAGAGC Reverse complement motif     Consensus sequence: GCTCTCAGGGTC


Dataset #: 1
Motif ID: 362
Motif name: Motif 362
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 12
Similarity score: 0.0566001

Alignment:
GCTCTGAAGGTCC
GCTCTCTGGGTC-

Original motif     Consensus sequence: GCTCTGAAGGTCC Reverse complement motif     Consensus sequence: GGACCTTCAGAGC


Dataset #: 1 Motif ID: 341 Motif name: Motif 341

Original motif     Consensus sequence: ATCCATCCATCCATCCA Reverse complement motif     Consensus sequence: TGGATGGATGGATGGAT

Best Matches for Motif ID 341 (Highest to Lowest)

Dataset #: 1
Motif ID: 115
Motif name: Motif 115
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 17
Similarity score: 0.0809092

Alignment:
HAGTGGKATTGCTGGATCAT
TGGATGGATGGATGGAT---

Original motif     Consensus sequence: ATGATCCAGCAATYCCACTH Reverse complement motif     Consensus sequence: HAGTGGKATTGCTGGATCAT


Dataset #: 1
Motif ID: 58
Motif name: Motif 58
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 17
Similarity score: 0.0940608

Alignment:
GAAHCAACCKAAKTGTCCAT
-ATCCATCCATCCATCCA--

Original motif     Consensus sequence: ATGGACAYTTRGGTTGHTTC Reverse complement motif     Consensus sequence: GAAHCAACCKAAKTGTCCAT


Dataset #: 1 Motif ID: 342 Motif name: Motif 342

Original motif     Consensus sequence: GCCTATTAAAC Reverse complement motif     Consensus sequence: GTTTAATAGGC

Best Matches for Motif ID 342 (Highest to Lowest)

Dataset #: 1
Motif ID: 129
Motif name: Motif 129
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 11
Similarity score: 0.032945

Alignment:
TGAGKCAATTAAACCTCTT
-----GCCTATTAAAC---

Original motif     Consensus sequence: AAGAGGTTTAATTGRCTCA Reverse complement motif     Consensus sequence: TGAGKCAATTAAACCTCTT


Dataset #: 1
Motif ID: 137
Motif name: Motif 137
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 7
Number of overlap: 11
Similarity score: 0.0624203

Alignment:
AGGTTTGTTACATAGGTAWA
---GTTTAATAGGC------

Original motif     Consensus sequence: AGGTTTGTTACATAGGTAWA Reverse complement motif     Consensus sequence: TWTACCTATGTAACAAACCT


Dataset #: 1 Motif ID: 343 Motif name: Motif 343

Original motif     Consensus sequence: CTGGGATTACA Reverse complement motif     Consensus sequence: TGTAATCCCAG

Best Matches for Motif ID 343 (Highest to Lowest)

Dataset #: 1
Motif ID: 4
Motif name: Motif 4
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.022272

Alignment:
GCTGGGATTACAGG
-CTGGGATTACA--

Original motif     Consensus sequence: GCTGGGATTACAGG Reverse complement motif     Consensus sequence: CCTGTAATCCCAGC


Dataset #: 1
Motif ID: 69
Motif name: Motif 69
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 11
Similarity score: 0.0277108

Alignment:
GTAGCTGGGAYTACA
----CTGGGATTACA

Original motif     Consensus sequence: GTAGCTGGGAYTACA Reverse complement motif     Consensus sequence: TGTAKTCCCAGCTAC


Dataset #: 1 Motif ID: 344 Motif name: Motif 344

Original motif     Consensus sequence: CATAGGAGATGAC Reverse complement motif     Consensus sequence: GTCATCTCCTATG

Best Matches for Motif ID 344 (Highest to Lowest)

Dataset #: 1
Motif ID: 99
Motif name: Motif 99
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 7
Number of overlap: 13
Similarity score: 0.0765815

Alignment:
GCAAAKGACATGATYTCATT
-CATAGGAGATGAC------

Original motif     Consensus sequence: GCAAAKGACATGATYTCATT Reverse complement motif     Consensus sequence: AATGAKATCATGTCYTTTGC


Dataset #: 1
Motif ID: 262
Motif name: Motif 262
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 8
Number of overlap: 13
Similarity score: 0.0805293

Alignment:
GACAGGAGATTAACACTGAG
-------CATAGGAGATGAC

Original motif     Consensus sequence: CTCAGTGTTAATCTCCTGTC Reverse complement motif     Consensus sequence: GACAGGAGATTAACACTGAG


Dataset #: 1 Motif ID: 345 Motif name: Motif 345

Original motif     Consensus sequence: CTGGGAATCCAAC Reverse complement motif     Consensus sequence: GTTGGATTCCCAG

Best Matches for Motif ID 345 (Highest to Lowest)

Dataset #: 1
Motif ID: 4
Motif name: Motif 4
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 13
Similarity score: 0.0624846

Alignment:
CCTGTAATCCCAGC
GTTGGATTCCCAG-

Original motif     Consensus sequence: GCTGGGATTACAGG Reverse complement motif     Consensus sequence: CCTGTAATCCCAGC


Dataset #: 1
Motif ID: 154
Motif name: Motif 154
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 13
Similarity score: 0.0631163

Alignment:
CATTAGATTCTCATAGGA
----GTTGGATTCCCAG-

Original motif     Consensus sequence: CATTAGATTCTCATAGGA Reverse complement motif     Consensus sequence: TCCTATGAGAATCTAATG


Dataset #: 1 Motif ID: 346 Motif name: Motif 346

Original motif     Consensus sequence: AAATCTTAAAGCTC Reverse complement motif     Consensus sequence: GAGCTTTAAGATTT

Best Matches for Motif ID 346 (Highest to Lowest)

Dataset #: 1
Motif ID: 303
Motif name: Motif 303
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0682748

Alignment:
ACCATCTTTAAGAACT
--GAGCTTTAAGATTT

Original motif     Consensus sequence: AGTTCTTAAAGATGGT Reverse complement motif     Consensus sequence: ACCATCTTTAAGAACT


Dataset #: 1
Motif ID: 202
Motif name: Motif 202
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 14
Similarity score: 0.0876662

Alignment:
GAAACTGCTTTGTGATGTGT
----GAGCTTTAAGATTT--

Original motif     Consensus sequence: ACACATCACAAAGCAGTTTC Reverse complement motif     Consensus sequence: GAAACTGCTTTGTGATGTGT


Dataset #: 1 Motif ID: 347 Motif name: Motif 347

Original motif     Consensus sequence: ACACCTATTCGCACAC Reverse complement motif     Consensus sequence: GTGTGCGAATAGGTGT

Best Matches for Motif ID 347 (Highest to Lowest)

Dataset #: 1
Motif ID: 66
Motif name: Motif 66
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 16
Similarity score: 0.0719682

Alignment:
ACACACAYACACACACACA
ACACCTATTCGCACAC---

Original motif     Consensus sequence: ACACACAYACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTKTGTGTGT


Dataset #: 1
Motif ID: 294
Motif name: Motif 294
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 16
Similarity score: 0.0824744

Alignment:
AGCTGTGAGAAGAGGGCCAC
--GTGTGCGAATAGGTGT--

Original motif     Consensus sequence: AGCTGTGAGAAGAGGGCCAC Reverse complement motif     Consensus sequence: GTGGCCCTCTTCTCACAGCT


Dataset #: 1 Motif ID: 348 Motif name: Motif 348

Original motif     Consensus sequence: ATGGCCTATGACYGSTTTG Reverse complement motif     Consensus sequence: CAAASCKGTCATAGGCCAT

Best Matches for Motif ID 348 (Highest to Lowest)

Dataset #: 1
Motif ID: 192
Motif name: Motif 192
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 19
Similarity score: 0.115392

Alignment:
ACAGGCTGTCCCAGGATTC
ATGGCCTATGACYGSTTTG

Original motif     Consensus sequence: GAATCCTGGGACAGCCTGT Reverse complement motif     Consensus sequence: ACAGGCTGTCCCAGGATTC


Dataset #: 1
Motif ID: 280
Motif name: Motif 280
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 19
Similarity score: 0.117513

Alignment:
ACATCMTCTGAAATCTAGG
ATGGCCTATGACYGSTTTG

Original motif     Consensus sequence: CCTAGATTTCAGARGATGT Reverse complement motif     Consensus sequence: ACATCMTCTGAAATCTAGG


Dataset #: 1 Motif ID: 349 Motif name: Motif 349

Original motif     Consensus sequence: AGAGCCAAATCATGARTGAA Reverse complement motif     Consensus sequence: TTCAMTCATGATTTGGCTCT

Best Matches for Motif ID 349 (Highest to Lowest)

Dataset #: 1
Motif ID: 109
Motif name: Motif 109
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 0.0991551

Alignment:
GAGAGAGAGAGAGAGAGAGA-
-AGAGCCAAATCATGARTGAA

Original motif     Consensus sequence: GAGAGAGAGAGAGAGAGAGA Reverse complement motif     Consensus sequence: TCTCTCTCTCTCTCTCTCTC


Dataset #: 1
Motif ID: 67
Motif name: Motif 67
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 19
Similarity score: 0.110012

Alignment:
-CTGGGCTCCTGAGTCTGGTG
TTCAMTCATGATTTGGCTCT-

Original motif     Consensus sequence: CTGGGCTCCTGAGTCTGGTG Reverse complement motif     Consensus sequence: CACCAGACTCAGGAGCCCAG


Dataset #: 1 Motif ID: 350 Motif name: Motif 350

Original motif     Consensus sequence: TCTGGAGTGGACCTCCAGCA Reverse complement motif     Consensus sequence: TGCTGGAGGTCCACTCCAGA

Best Matches for Motif ID 350 (Highest to Lowest)

Dataset #: 1
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 20
Similarity score: 0.100512

Alignment:
GCTGGAGTGCAGTGGCRYGA
TCTGGAGTGGACCTCCAGCA

Original motif     Consensus sequence: GCTGGAGTGCAGTGGCRYGA Reverse complement motif     Consensus sequence: TCKMGCCACTGCACTCCAGC


Dataset #: 1
Motif ID: 178
Motif name: Motif 178
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 20
Similarity score: 0.103785

Alignment:
ATGTGGAGGTGGAAGACAGT
TGCTGGAGGTCCACTCCAGA

Original motif     Consensus sequence: ACTGTCTTCCACCTCCACAT Reverse complement motif     Consensus sequence: ATGTGGAGGTGGAAGACAGT


Dataset #: 1 Motif ID: 351 Motif name: Motif 351

Original motif     Consensus sequence: ATTMGGGTGGG Reverse complement motif     Consensus sequence: CCCACCCYAAT

Best Matches for Motif ID 351 (Highest to Lowest)

Dataset #: 1
Motif ID: 259
Motif name: Motif 259
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 11
Similarity score: 0.0511125

Alignment:
CCCACACCCTTATTA
--CCCACCCYAAT--

Original motif     Consensus sequence: CCCACACCCTTATTA Reverse complement motif     Consensus sequence: TAATAAGGGTGTGGG


Dataset #: 1
Motif ID: 98
Motif name: Motif 98
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 7
Number of overlap: 11
Similarity score: 0.0610932

Alignment:
AGTTCCGGGTGGGCGTGGG
--ATTMGGGTGGG------

Original motif     Consensus sequence: AGTTCCGGGTGGGCGTGGG Reverse complement motif     Consensus sequence: CCCACGCCCACCCGGAACT


Dataset #: 1 Motif ID: 352 Motif name: Motif 352

Original motif     Consensus sequence: CATCTTCA Reverse complement motif     Consensus sequence: TGAAGATG

Best Matches for Motif ID 352 (Highest to Lowest)

Dataset #: 1
Motif ID: 246
Motif name: Motif 246
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 8
Number of overlap: 8
Similarity score: 0.0276887

Alignment:
TCAGGAGTGAAGCTGC
-------TGAAGATG-

Original motif     Consensus sequence: GCAGCTTCACTCCTGA Reverse complement motif     Consensus sequence: TCAGGAGTGAAGCTGC


Dataset #: 1
Motif ID: 303
Motif name: Motif 303
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0334876

Alignment:
ACCATCTTTAAGAACT
------CATCTTCA--

Original motif     Consensus sequence: AGTTCTTAAAGATGGT Reverse complement motif     Consensus sequence: ACCATCTTTAAGAACT


Dataset #: 1 Motif ID: 353 Motif name: Motif 353

Original motif     Consensus sequence: CACATGGAAGC Reverse complement motif     Consensus sequence: GCTTCCATGTG

Best Matches for Motif ID 353 (Highest to Lowest)

Dataset #: 1
Motif ID: 225
Motif name: Motif 225
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.0523615

Alignment:
AAGTTCTKGGKTACATGTGC
--------GCTTCCATGTG-

Original motif     Consensus sequence: GCACATGTAYCCYAGAACTT Reverse complement motif     Consensus sequence: AAGTTCTKGGKTACATGTGC


Dataset #: 1
Motif ID: 104
Motif name: Motif 104
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.0616894

Alignment:
CTCCAGKTMCATCCATGTTG
--------GCTTCCATGTG-

Original motif     Consensus sequence: CAACATGGATGRARCTGGAG Reverse complement motif     Consensus sequence: CTCCAGKTMCATCCATGTTG


Dataset #: 1 Motif ID: 354 Motif name: Motif 354

Original motif     Consensus sequence: GCTGATAAAGAC Reverse complement motif     Consensus sequence: GTCTTTATCAGC

Best Matches for Motif ID 354 (Highest to Lowest)

Dataset #: 1
Motif ID: 329
Motif name: Motif 329
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 6
Number of overlap: 12
Similarity score: 0.0760989

Alignment:
GGGAGGGATATATTAGC
GTCTTTATCAGC-----

Original motif     Consensus sequence: GGGAGGGATATATTAGC Reverse complement motif     Consensus sequence: GCTAATATATCCCTCCC


Dataset #: 1
Motif ID: 106
Motif name: Motif 106
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 7
Number of overlap: 12
Similarity score: 0.0776121

Alignment:
GGGATTGTAAATACACCAAT
------GCTGATAAAGAC--

Original motif     Consensus sequence: ATTGGTGTATTTACAATCCC Reverse complement motif     Consensus sequence: GGGATTGTAAATACACCAAT


Dataset #: 1 Motif ID: 355 Motif name: Motif 355

Original motif     Consensus sequence: TATGAGCCTGTAA Reverse complement motif     Consensus sequence: TTACAGGCTCATA

Best Matches for Motif ID 355 (Highest to Lowest)

Dataset #: 1
Motif ID: 154
Motif name: Motif 154
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 13
Similarity score: 0.059588

Alignment:
TCCTATGAGAATCTAATG
--TATGAGCCTGTAA---

Original motif     Consensus sequence: CATTAGATTCTCATAGGA Reverse complement motif     Consensus sequence: TCCTATGAGAATCTAATG


Dataset #: 1
Motif ID: 275
Motif name: Motif 275
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 13
Similarity score: 0.0903624

Alignment:
CTCACAGAGTTAAA
TTACAGGCTCATA-

Original motif     Consensus sequence: CTCACAGAGTTAAA Reverse complement motif     Consensus sequence: TTTAACTCTGTGAG


Dataset #: 1 Motif ID: 356 Motif name: Motif 356

Original motif     Consensus sequence: AATTAAAAGACACAGACTG Reverse complement motif     Consensus sequence: CAGTCTGTGTCTTTTAATT

Best Matches for Motif ID 356 (Highest to Lowest)

Dataset #: 1
Motif ID: 333
Motif name: Motif 333
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 0.10357

Alignment:
TAGATAATAGCTCCAGCTTT
-AATTAAAAGACACAGACTG

Original motif     Consensus sequence: TAGATAATAGCTCCAGCTTT Reverse complement motif     Consensus sequence: AAAGCTGGAGCTATTATCTA


Dataset #: 1
Motif ID: 357
Motif name: Motif 357
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 19
Similarity score: 0.10942

Alignment:
TAATTTTATGTGTCAACTTG
-AATTAAAAGACACAGACTG

Original motif     Consensus sequence: CAAGTTGACACATAAAATTA Reverse complement motif     Consensus sequence: TAATTTTATGTGTCAACTTG


Dataset #: 1 Motif ID: 357 Motif name: Motif 357

Original motif     Consensus sequence: CAAGTTGACACATAAAATTA Reverse complement motif     Consensus sequence: TAATTTTATGTGTCAACTTG

Best Matches for Motif ID 357 (Highest to Lowest)

Dataset #: 1
Motif ID: 171
Motif name: Motif 171
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 19
Similarity score: 0.0907717

Alignment:
-ACTTTGGACTGTGGACTTTT
TAATTTTATGTGTCAACTTG-

Original motif     Consensus sequence: AAAAGTCCACAGTCCAAAGT Reverse complement motif     Consensus sequence: ACTTTGGACTGTGGACTTTT


Dataset #: 1
Motif ID: 225
Motif name: Motif 225
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 19
Similarity score: 0.100576

Alignment:
-AAGTTCTKGGKTACATGTGC
TAATTTTATGTGTCAACTTG-

Original motif     Consensus sequence: GCACATGTAYCCYAGAACTT Reverse complement motif     Consensus sequence: AAGTTCTKGGKTACATGTGC


Dataset #: 1 Motif ID: 358 Motif name: Motif 358

Original motif     Consensus sequence: CGTCCATCACCCC Reverse complement motif     Consensus sequence: GGGGTGATGGACG

Best Matches for Motif ID 358 (Highest to Lowest)

Dataset #: 1
Motif ID: 1
Motif name: Motif 1
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 13
Similarity score: 0.0685601

Alignment:
BCVTCTGTCACCCC
CGTCCATCACCCC-

Original motif     Consensus sequence: GGGGTGACAGABGB Reverse complement motif     Consensus sequence: BCVTCTGTCACCCC


Dataset #: 1
Motif ID: 53
Motif name: Motif 53
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 13
Similarity score: 0.0721847

Alignment:
GTCCCATCGACCACCCAAG
----CGTCCATCACCCC--

Original motif     Consensus sequence: GTCCCATCGACCACCCAAG Reverse complement motif     Consensus sequence: CTTGGGTGGTCGATGGGAC


Dataset #: 1 Motif ID: 359 Motif name: Motif 359

Original motif     Consensus sequence: TGACGTCACS Reverse complement motif     Consensus sequence: SGTGACGTCA

Best Matches for Motif ID 359 (Highest to Lowest)

Dataset #: 1
Motif ID: 61
Motif name: Motif 61
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0622858

Alignment:
GGATCCACTGGGTGAAGCCA
SGTGACGTCA----------

Original motif     Consensus sequence: GGATCCACTGGGTGAAGCCA Reverse complement motif     Consensus sequence: TGGCTTCACCCAGTGGATCC


Dataset #: 1
Motif ID: 279
Motif name: Motif 279
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 10
Similarity score: 0.0624843

Alignment:
MGTGTGATGTCTCCCCC
---TGACGTCACS----

Original motif     Consensus sequence: GGGGGAGACATCACACR Reverse complement motif     Consensus sequence: MGTGTGATGTCTCCCCC


Dataset #: 1 Motif ID: 360 Motif name: Motif 360

Original motif     Consensus sequence: CAATGGGGTG Reverse complement motif     Consensus sequence: CACCCCATTG

Best Matches for Motif ID 360 (Highest to Lowest)

Dataset #: 1
Motif ID: 193
Motif name: Motif 193
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 4
Number of overlap: 10
Similarity score: 0.0498627

Alignment:
ATACAATGGGGGTACAGRC
---CAATGGGGTG------

Original motif     Consensus sequence: ATACAATGGGGGTACAGRC Reverse complement motif     Consensus sequence: GKCTGTACCCCCATTGTAT


Dataset #: 1
Motif ID: 284
Motif name: Motif 284
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.0546882

Alignment:
TCAATGGGCTCCCAAATG
-------CAATGGGGTG-

Original motif     Consensus sequence: CATTTGGGAGCCCATTGA Reverse complement motif     Consensus sequence: TCAATGGGCTCCCAAATG


Dataset #: 1 Motif ID: 361 Motif name: Motif 361

Original motif     Consensus sequence: AGGTCAGGAGTTC Reverse complement motif     Consensus sequence: GAACTCCTGACCT

Best Matches for Motif ID 361 (Highest to Lowest)

Dataset #: 1
Motif ID: 291
Motif name: Motif 291
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 13
Similarity score: 0.0663108

Alignment:
TAMGACCTCAGGTCCTCAG
---GAACTCCTGACCT---

Original motif     Consensus sequence: CTGAGGACCTGAGGTCRTA Reverse complement motif     Consensus sequence: TAMGACCTCAGGTCCTCAG


Dataset #: 1
Motif ID: 234
Motif name: Motif 234
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 8
Number of overlap: 13
Similarity score: 0.0705628

Alignment:
AAGGAACAAACTCCRGACAC
GAACTCCTGACCT-------

Original motif     Consensus sequence: AAGGAACAAACTCCRGACAC Reverse complement motif     Consensus sequence: GTGTCKGGAGTTTGTTCCTT


Dataset #: 1 Motif ID: 362 Motif name: Motif 362

Original motif     Consensus sequence: GCTCTGAAGGTCC Reverse complement motif     Consensus sequence: GGACCTTCAGAGC

Best Matches for Motif ID 362 (Highest to Lowest)

Dataset #: 1
Motif ID: 10
Motif name: Motif 10
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 13
Similarity score: 0.0695238

Alignment:
MCCYGGCWSMGASGSTCCT
-GCTCTGAAGGTCC-----

Original motif     Consensus sequence: AGGASCSTCYSWGCCMGGY Reverse complement motif     Consensus sequence: MCCYGGCWSMGASGSTCCT


Dataset #: 1
Motif ID: 179
Motif name: Motif 179
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 13
Similarity score: 0.0873004

Alignment:
GAATACCTCCTGAAGGACCT
-GCTCTGAAGGTCC------

Original motif     Consensus sequence: AGGTCCTTCAGGAGGTATTC Reverse complement motif     Consensus sequence: GAATACCTCCTGAAGGACCT


Dataset #: 1 Motif ID: 363 Motif name: Motif 363

Original motif     Consensus sequence: CAAGGTCTGATTGTW Reverse complement motif     Consensus sequence: WACAATCAGACCTTG

Best Matches for Motif ID 363 (Highest to Lowest)

Dataset #: 1
Motif ID: 227
Motif name: Motif 227
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 15
Similarity score: 0.0937179

Alignment:
ATTCAASATGAGATTTGGG
-CAAGGTCTGATTGTW---

Original motif     Consensus sequence: CCCAAATCTCATSTTGAAT Reverse complement motif     Consensus sequence: ATTCAASATGAGATTTGGG


Dataset #: 1
Motif ID: 119
Motif name: Motif 119
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 15
Similarity score: 0.0941068

Alignment:
AAGTCCAAGATCAAGGTGYY
-----CAAGGTCTGATTGTW

Original motif     Consensus sequence: AAGTCCAAGATCAAGGTGYY Reverse complement motif     Consensus sequence: KKCACCTTGATCTTGGACTT


Dataset #: 1 Motif ID: 364 Motif name: Motif 364

Original motif     Consensus sequence: GGATTTGAACY Reverse complement motif     Consensus sequence: MGTTCAAATCC

Best Matches for Motif ID 364 (Highest to Lowest)

Dataset #: 1
Motif ID: 350
Motif name: Motif 350
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 7
Number of overlap: 11
Similarity score: 0.0565307

Alignment:
TGCTGGAGGTCCACTCCAGA
------MGTTCAAATCC---

Original motif     Consensus sequence: TCTGGAGTGGACCTCCAGCA Reverse complement motif     Consensus sequence: TGCTGGAGGTCCACTCCAGA


Dataset #: 1
Motif ID: 214
Motif name: Motif 214
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 11
Similarity score: 0.0725975

Alignment:
GGTTTTCCATTCCTGAG
--MGTTCAAATCC----

Original motif     Consensus sequence: CTCAGGAATGGAAAACC Reverse complement motif     Consensus sequence: GGTTTTCCATTCCTGAG


Dataset #: 1 Motif ID: 365 Motif name: Motif 365

Original motif     Consensus sequence: AGCTCCGGTCTAC Reverse complement motif     Consensus sequence: GTAGACCGGAGCT

Best Matches for Motif ID 365 (Highest to Lowest)

Dataset #: 1
Motif ID: 62
Motif name: Motif 62
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 7
Number of overlap: 13
Similarity score: 0.00780309

Alignment:
AGGAACAGCTCCRGTCTAC
------AGCTCCGGTCTAC

Original motif     Consensus sequence: AGGAACAGCTCCRGTCTAC Reverse complement motif     Consensus sequence: GTAGACKGGAGCTGTTCCT


Dataset #: 1
Motif ID: 291
Motif name: Motif 291
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 13
Similarity score: 0.0802174

Alignment:
CTGAGGACCTGAGGTCRTA
----GTAGACCGGAGCT--

Original motif     Consensus sequence: CTGAGGACCTGAGGTCRTA Reverse complement motif     Consensus sequence: TAMGACCTCAGGTCCTCAG


Results created by MOTIFSIM on 03-23-2023 12:04:47
Runtime: 460.96 seconds

MOTIFSIM is written by Ngoc Tam L. Tran
Motif logo generated by weblogo