MOTIFSIM - MOTIF SIMilarity Detection Tool

Input Parameters

Number of files:	1
Number of top significant motifs:	10
Number of best matches:	10
Similarity cutoff >=	0.75
Matching motif database:	None
Motif tree:	No
Combined similar motifs:	No
Output file type:	All
Output file format:	HTML

Input files and motif counts

File name	Count of motifs	Dataset number
U20230325-memeInput.txt	20	1

Top 10 Significant Motifs - Global Matching (Highest to Lowest)

There is no global matching for 1 motif file.

Significant Motifs - Global and Local Matching (Highest to Lowest)

Dataset #: 1

Motif ID: 6

Motif name: Motif 6

Original motif     Consensus sequence: CSKCCCCGCCCCSY	Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG

Best Matches for Significant Motif ID 6 (Highest to Lowest)

Dataset #:	1
Motif ID:	1
Motif name:	Motif 1
Matching format of first motif:	Original Motif
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	4
Number of overlap:	11
Similarity score:	0.0157992

Alignment:
MTMMTCMMTCTKCK---
---CSKCCCCGCCCCSY

Original motif     Consensus sequence: RGRAGARRGARRAR	Reverse complement motif     Consensus sequence: MTMMTCMMTCTKCK

---

Dataset #: 1

Motif ID: 20

Motif name: Motif 20

Original motif     Consensus sequence: ATAAAA	Reverse complement motif     Consensus sequence: TTTTAT

Best Matches for Significant Motif ID 20 (Highest to Lowest)

Dataset #:	1
Motif ID:	14
Motif name:	Motif 14
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	7
Number of overlap:	6
Similarity score:	0

Alignment:
TTTTATTGTYAT
TTTTAT------

Original motif     Consensus sequence: ATMACAATAAAA	Reverse complement motif     Consensus sequence: TTTTATTGTYAT

---

Dataset #:	1
Motif ID:	4
Motif name:	Motif 4
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	6
Number of overlap:	6
Similarity score:	0.0208333

Alignment:
AAATTKTATTTAWT
---TTTTAT-----

Original motif     Consensus sequence: AWTAAATAYAATTT	Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

---

Dataset #:	1
Motif ID:	7
Motif name:	Motif 7
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	6
Number of overlap:	6
Similarity score:	0.0208333

Alignment:
TGATTTTAWKATTT
---TTTTAT-----

Original motif     Consensus sequence: AAATRWTAAAATCA	Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

---

Dataset #:	1
Motif ID:	10
Motif name:	Motif 10
Matching format of first motif:	Original Motif
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	2
Number of overlap:	6
Similarity score:	0.0208333

Alignment:
TTTCATWAAAT
-ATAAAA----

Original motif     Consensus sequence: ATTTWATGAAA	Reverse complement motif     Consensus sequence: TTTCATWAAAT

---

Dataset #:	1
Motif ID:	9
Motif name:	Motif 9
Matching format of first motif:	Original Motif
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	5
Number of overlap:	6
Similarity score:	0.0416667

Alignment:
AWTTATGAAA
ATAAAA----

Original motif     Consensus sequence: TTTCATAAWT	Reverse complement motif     Consensus sequence: AWTTATGAAA

---

Dataset #:	1
Motif ID:	18
Motif name:	Motif 18
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	1
Number of overlap:	6
Similarity score:	0.0625

Alignment:
TTCWTAGATTAWA
-------ATAAAA

Original motif     Consensus sequence: TTCWTAGATTAWA	Reverse complement motif     Consensus sequence: TWTAATCTAWGAA

---

Dataset #:	1
Motif ID:	19
Motif name:	Motif 19
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	1
Number of overlap:	6
Similarity score:	0.0625

Alignment:
TTMAAAGATTT
ATAAAA-----

Original motif     Consensus sequence: TTMAAAGATTT	Reverse complement motif     Consensus sequence: AAATCTTTYAA

---

Dataset #:	1
Motif ID:	13
Motif name:	Motif 13
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	3
Number of overlap:	6
Similarity score:	0.0625

Alignment:
AWAAATAA
ATAAAA--

Original motif     Consensus sequence: AWAAATAA	Reverse complement motif     Consensus sequence: TTATTTWT

---

Dataset #:	1
Motif ID:	2
Motif name:	Motif 2
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	4
Number of overlap:	6
Similarity score:	0.0689103

Alignment:
TWSTTTWAWTTTWT
---TTTTAT-----

Original motif     Consensus sequence: AWAAAWTWAAASWA	Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

---

Dataset #:	1
Motif ID:	8
Motif name:	Motif 8
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	9
Number of overlap:	6
Similarity score:	0.0729167

Alignment:
TTTDAWATATHATT
TTTTAT--------

Original motif     Consensus sequence: AATHATATWTHAAA	Reverse complement motif     Consensus sequence: TTTDAWATATHATT

---

Dataset #: 1

Motif ID: 9

Motif name: Motif 9

Original motif     Consensus sequence: TTTCATAAWT	Reverse complement motif     Consensus sequence: AWTTATGAAA

Best Matches for Significant Motif ID 9 (Highest to Lowest)

Dataset #:	1
Motif ID:	10
Motif name:	Motif 10
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	2
Number of overlap:	10
Similarity score:	0.01875

Alignment:
ATTTWATGAAA
-AWTTATGAAA

Original motif     Consensus sequence: ATTTWATGAAA	Reverse complement motif     Consensus sequence: TTTCATWAAAT

---

Dataset #:	1
Motif ID:	5
Motif name:	Motif 5
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	5
Number of overlap:	10
Similarity score:	0.0375

Alignment:
AATTYDGAARTAWW
----AWTTATGAAA

Original motif     Consensus sequence: AATTYDGAARTAWW	Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

---

Dataset #:	1
Motif ID:	7
Motif name:	Motif 7
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	2
Number of overlap:	10
Similarity score:	0.04375

Alignment:
AAATRWTAAAATCA
---AWTTATGAAA-

Original motif     Consensus sequence: AAATRWTAAAATCA	Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

---

Dataset #:	1
Motif ID:	16
Motif name:	Motif 16
Matching format of first motif:	Original Motif
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	1
Number of overlap:	10
Similarity score:	0.05625

Alignment:
ATTCATTTTT
TTTCATAAWT

Original motif     Consensus sequence: AAAAATGAAT	Reverse complement motif     Consensus sequence: ATTCATTTTT

---

Dataset #:	1
Motif ID:	4
Motif name:	Motif 4
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	1
Number of overlap:	10
Similarity score:	0.05625

Alignment:
AWTAAATAYAATTT
----AWTTATGAAA

Original motif     Consensus sequence: AWTAAATAYAATTT	Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

---

Dataset #:	1
Motif ID:	8
Motif name:	Motif 8
Matching format of first motif:	Original Motif
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	5
Number of overlap:	10
Similarity score:	0.0604166

Alignment:
TTTDAWATATHATT
----TTTCATAAWT

Original motif     Consensus sequence: AATHATATWTHAAA	Reverse complement motif     Consensus sequence: TTTDAWATATHATT

---

Dataset #:	1
Motif ID:	14
Motif name:	Motif 14
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	1
Number of overlap:	10
Similarity score:	0.06875

Alignment:
ATMACAATAAAA
--AWTTATGAAA

Original motif     Consensus sequence: ATMACAATAAAA	Reverse complement motif     Consensus sequence: TTTTATTGTYAT

---

Dataset #:	1
Motif ID:	2
Motif name:	Motif 2
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	5
Number of overlap:	10
Similarity score:	0.0706731

Alignment:
AWAAAWTWAAASWA
----AWTTATGAAA

Original motif     Consensus sequence: AWAAAWTWAAASWA	Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

---

Dataset #:	1
Motif ID:	18
Motif name:	Motif 18
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	1
Number of overlap:	10
Similarity score:	0.08125

Alignment:
TTCWTAGATTAWA
---TTTCATAAWT

Original motif     Consensus sequence: TTCWTAGATTAWA	Reverse complement motif     Consensus sequence: TWTAATCTAWGAA

---

Dataset #:	1
Motif ID:	19
Motif name:	Motif 19
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	1
Number of overlap:	10
Similarity score:	0.08125

Alignment:
TTMAAAGATTT
TTTCATAAWT-

Original motif     Consensus sequence: TTMAAAGATTT	Reverse complement motif     Consensus sequence: AAATCTTTYAA

---

Dataset #: 1

Motif ID: 13

Motif name: Motif 13

Original motif     Consensus sequence: AWAAATAA	Reverse complement motif     Consensus sequence: TTATTTWT

Best Matches for Significant Motif ID 13 (Highest to Lowest)

Dataset #:	1
Motif ID:	16
Motif name:	Motif 16
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	1
Number of overlap:	8
Similarity score:	0.046875

Alignment:
AAAAATGAAT
AWAAATAA--

Original motif     Consensus sequence: AAAAATGAAT	Reverse complement motif     Consensus sequence: ATTCATTTTT

---

Dataset #:	1
Motif ID:	4
Motif name:	Motif 4
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	6
Number of overlap:	8
Similarity score:	0.046875

Alignment:
AAATTKTATTTAWT
-----TTATTTWT-

Original motif     Consensus sequence: AWTAAATAYAATTT	Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

---

Dataset #:	1
Motif ID:	14
Motif name:	Motif 14
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	3
Number of overlap:	8
Similarity score:	0.0625

Alignment:
ATMACAATAAAA
--AWAAATAA--

Original motif     Consensus sequence: ATMACAATAAAA	Reverse complement motif     Consensus sequence: TTTTATTGTYAT

---

Dataset #:	1
Motif ID:	15
Motif name:	Motif 15
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	7
Number of overlap:	8
Similarity score:	0.0625

Alignment:
TCAAAATKAWTTGT
------TTATTTWT

Original motif     Consensus sequence: ACAAWTRATTTTGA	Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT

---

Dataset #:	1
Motif ID:	7
Motif name:	Motif 7
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	7
Number of overlap:	8
Similarity score:	0.078125

Alignment:
TGATTTTAWKATTT
TTATTTWT------

Original motif     Consensus sequence: AAATRWTAAAATCA	Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

---

Dataset #:	1
Motif ID:	11
Motif name:	Motif 11
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	1
Number of overlap:	8
Similarity score:	0.078125

Alignment:
AAAACAAA
AWAAATAA

Original motif     Consensus sequence: AAAACAAA	Reverse complement motif     Consensus sequence: TTTGTTTT

---

Dataset #:	1
Motif ID:	17
Motif name:	Motif 17
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	4
Number of overlap:	8
Similarity score:	0.078125

Alignment:
TTAGWTWATAA
TTATTTWT---

Original motif     Consensus sequence: TTAGWTWATAA	Reverse complement motif     Consensus sequence: TTATWAWCTAA

---

Dataset #:	1
Motif ID:	2
Motif name:	Motif 2
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	1
Number of overlap:	8
Similarity score:	0.0829327

Alignment:
TWSTTTWAWTTTWT
------TTATTTWT

Original motif     Consensus sequence: AWAAAWTWAAASWA	Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

---

Dataset #:	1
Motif ID:	5
Motif name:	Motif 5
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	6
Number of overlap:	8
Similarity score:	0.0859375

Alignment:
AATTYDGAARTAWW
-----AWAAATAA-

Original motif     Consensus sequence: AATTYDGAARTAWW	Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

---

Dataset #:	1
Motif ID:	3
Motif name:	Motif 3
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	4
Number of overlap:	8
Similarity score:	0.0863487

Alignment:
AWGKAAWTTTT
---TTATTTWT

Original motif     Consensus sequence: AAAAWTTRCWT	Reverse complement motif     Consensus sequence: AWGKAAWTTTT

---

Dataset #: 1

Motif ID: 12

Motif name: Motif 12

Original motif     Consensus sequence: AAAGATTT	Reverse complement motif     Consensus sequence: AAATCTTT

Best Matches for Significant Motif ID 12 (Highest to Lowest)

Dataset #:	1
Motif ID:	19
Motif name:	Motif 19
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	4
Number of overlap:	8
Similarity score:	0

Alignment:
AAATCTTTYAA
AAATCTTT---

Original motif     Consensus sequence: TTMAAAGATTT	Reverse complement motif     Consensus sequence: AAATCTTTYAA

---

Dataset #:	1
Motif ID:	15
Motif name:	Motif 15
Matching format of first motif:	Original Motif
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	5
Number of overlap:	8
Similarity score:	0.0625

Alignment:
TCAAAATKAWTTGT
----AAAGATTT--

Original motif     Consensus sequence: ACAAWTRATTTTGA	Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT

---

Dataset #:	1
Motif ID:	7
Motif name:	Motif 7
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	1
Number of overlap:	8
Similarity score:	0.0625

Alignment:
AAATRWTAAAATCA
------AAATCTTT

Original motif     Consensus sequence: AAATRWTAAAATCA	Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

---

Dataset #:	1
Motif ID:	18
Motif name:	Motif 18
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	3
Number of overlap:	8
Similarity score:	0.078125

Alignment:
TWTAATCTAWGAA
--AAATCTTT---

Original motif     Consensus sequence: TTCWTAGATTAWA	Reverse complement motif     Consensus sequence: TWTAATCTAWGAA

---

Dataset #:	1
Motif ID:	4
Motif name:	Motif 4
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	1
Number of overlap:	8
Similarity score:	0.078125

Alignment:
AAATTKTATTTAWT
AAATCTTT------

Original motif     Consensus sequence: AWTAAATAYAATTT	Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

---

Dataset #:	1
Motif ID:	3
Motif name:	Motif 3
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	4
Number of overlap:	8
Similarity score:	0.0822369

Alignment:
AWGKAAWTTTT
---AAATCTTT

Original motif     Consensus sequence: AAAAWTTRCWT	Reverse complement motif     Consensus sequence: AWGKAAWTTTT

---

Dataset #:	1
Motif ID:	16
Motif name:	Motif 16
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	3
Number of overlap:	8
Similarity score:	0.09375

Alignment:
AAAAATGAAT
--AAATCTTT

Original motif     Consensus sequence: AAAAATGAAT	Reverse complement motif     Consensus sequence: ATTCATTTTT

---

Dataset #:	1
Motif ID:	13
Motif name:	Motif 13
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	1
Number of overlap:	8
Similarity score:	0.109375

Alignment:
AWAAATAA
AAAGATTT

Original motif     Consensus sequence: AWAAATAA	Reverse complement motif     Consensus sequence: TTATTTWT

---

Dataset #:	1
Motif ID:	2
Motif name:	Motif 2
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	7
Number of overlap:	8
Similarity score:	0.110577

Alignment:
AWAAAWTWAAASWA
AAAGATTT------

Original motif     Consensus sequence: AWAAAWTWAAASWA	Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

---

Dataset #:	1
Motif ID:	8
Motif name:	Motif 8
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	3
Number of overlap:	8
Similarity score:	0.117187

Alignment:
AATHATATWTHAAA
--AAAGATTT----

Original motif     Consensus sequence: AATHATATWTHAAA	Reverse complement motif     Consensus sequence: TTTDAWATATHATT

---

Dataset #: 1

Motif ID: 11

Motif name: Motif 11

Original motif     Consensus sequence: AAAACAAA	Reverse complement motif     Consensus sequence: TTTGTTTT

Best Matches for Significant Motif ID 11 (Highest to Lowest)

Dataset #:	1
Motif ID:	14
Motif name:	Motif 14
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	2
Number of overlap:	8
Similarity score:	0.0625

Alignment:
TTTTATTGTYAT
-TTTGTTTT---

Original motif     Consensus sequence: ATMACAATAAAA	Reverse complement motif     Consensus sequence: TTTTATTGTYAT

---

Dataset #:	1
Motif ID:	16
Motif name:	Motif 16
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	2
Number of overlap:	8
Similarity score:	0.0625

Alignment:
AAAAATGAAT
-AAAACAAA-

Original motif     Consensus sequence: AAAAATGAAT	Reverse complement motif     Consensus sequence: ATTCATTTTT

---

Dataset #:	1
Motif ID:	4
Motif name:	Motif 4
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	4
Number of overlap:	8
Similarity score:	0.078125

Alignment:
AAATTKTATTTAWT
---TTTGTTTT---

Original motif     Consensus sequence: AWTAAATAYAATTT	Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

---

Dataset #:	1
Motif ID:	15
Motif name:	Motif 15
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	3
Number of overlap:	8
Similarity score:	0.078125

Alignment:
ACAAWTRATTTTGA
----TTTGTTTT--

Original motif     Consensus sequence: ACAAWTRATTTTGA	Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT

---

Dataset #:	1
Motif ID:	13
Motif name:	Motif 13
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	1
Number of overlap:	8
Similarity score:	0.078125

Alignment:
AWAAATAA
AAAACAAA

Original motif     Consensus sequence: AWAAATAA	Reverse complement motif     Consensus sequence: TTATTTWT

---

Dataset #:	1
Motif ID:	2
Motif name:	Motif 2
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	3
Number of overlap:	8
Similarity score:	0.0805288

Alignment:
AWAAAWTWAAASWA
--AAAACAAA----

Original motif     Consensus sequence: AWAAAWTWAAASWA	Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

---

Dataset #:	1
Motif ID:	17
Motif name:	Motif 17
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	1
Number of overlap:	8
Similarity score:	0.09375

Alignment:
TTAGWTWATAA
TTTGTTTT---

Original motif     Consensus sequence: TTAGWTWATAA	Reverse complement motif     Consensus sequence: TTATWAWCTAA

---

Dataset #:	1
Motif ID:	7
Motif name:	Motif 7
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	7
Number of overlap:	8
Similarity score:	0.09375

Alignment:
TGATTTTAWKATTT
------TTTGTTTT

Original motif     Consensus sequence: AAATRWTAAAATCA	Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

---

Dataset #:	1
Motif ID:	5
Motif name:	Motif 5
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	2
Number of overlap:	8
Similarity score:	0.101562

Alignment:
WWTAKTTCDKAATT
-TTTGTTTT-----

Original motif     Consensus sequence: AATTYDGAARTAWW	Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

---

Dataset #:	1
Motif ID:	3
Motif name:	Motif 3
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	4
Number of overlap:	8
Similarity score:	0.103618

Alignment:
AAAAWTTRCWT
AAAACAAA---

Original motif     Consensus sequence: AAAAWTTRCWT	Reverse complement motif     Consensus sequence: AWGKAAWTTTT

---

Dataset #: 1

Motif ID: 16

Motif name: Motif 16

Original motif     Consensus sequence: AAAAATGAAT	Reverse complement motif     Consensus sequence: ATTCATTTTT

Best Matches for Significant Motif ID 16 (Highest to Lowest)

Dataset #:	1
Motif ID:	15
Motif name:	Motif 15
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	4
Number of overlap:	10
Similarity score:	0.05

Alignment:
ACAAWTRATTTTGA
-ATTCATTTTT---

Original motif     Consensus sequence: ACAAWTRATTTTGA	Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT

---

Dataset #:	1
Motif ID:	9
Motif name:	Motif 9
Matching format of first motif:	Original Motif
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	1
Number of overlap:	10
Similarity score:	0.0875

Alignment:
AWTTATGAAA
AAAAATGAAT

Original motif     Consensus sequence: TTTCATAAWT	Reverse complement motif     Consensus sequence: AWTTATGAAA

---

Dataset #:	1
Motif ID:	4
Motif name:	Motif 4
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	2
Number of overlap:	10
Similarity score:	0.0875

Alignment:
AWTAAATAYAATTT
---AAAAATGAAT-

Original motif     Consensus sequence: AWTAAATAYAATTT	Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

---

Dataset #:	1
Motif ID:	14
Motif name:	Motif 14
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	1
Number of overlap:	10
Similarity score:	0.0875

Alignment:
ATMACAATAAAA
--AAAAATGAAT

Original motif     Consensus sequence: ATMACAATAAAA	Reverse complement motif     Consensus sequence: TTTTATTGTYAT

---

Dataset #:	1
Motif ID:	3
Motif name:	Motif 3
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	1
Number of overlap:	10
Similarity score:	0.0947369

Alignment:
AWGKAAWTTTT
-ATTCATTTTT

Original motif     Consensus sequence: AAAAWTTRCWT	Reverse complement motif     Consensus sequence: AWGKAAWTTTT

---

Dataset #:	1
Motif ID:	7
Motif name:	Motif 7
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	1
Number of overlap:	10
Similarity score:	0.1

Alignment:
TGATTTTAWKATTT
----ATTCATTTTT

Original motif     Consensus sequence: AAATRWTAAAATCA	Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

---

Dataset #:	1
Motif ID:	2
Motif name:	Motif 2
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	1
Number of overlap:	10
Similarity score:	0.104808

Alignment:
TWSTTTWAWTTTWT
----ATTCATTTTT

Original motif     Consensus sequence: AWAAAWTWAAASWA	Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

---

Dataset #:	1
Motif ID:	8
Motif name:	Motif 8
Matching format of first motif:	Original Motif
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	1
Number of overlap:	10
Similarity score:	0.10625

Alignment:
TTTDAWATATHATT
AAAAATGAAT----

Original motif     Consensus sequence: AATHATATWTHAAA	Reverse complement motif     Consensus sequence: TTTDAWATATHATT

---

Dataset #:	1
Motif ID:	19
Motif name:	Motif 19
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	2
Number of overlap:	10
Similarity score:	0.1125

Alignment:
AAATCTTTYAA
-ATTCATTTTT

Original motif     Consensus sequence: TTMAAAGATTT	Reverse complement motif     Consensus sequence: AAATCTTTYAA

---

Dataset #:	1
Motif ID:	10
Motif name:	Motif 10
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	2
Number of overlap:	10
Similarity score:	0.1125

Alignment:
ATTTWATGAAA
-AAAAATGAAT

Original motif     Consensus sequence: ATTTWATGAAA	Reverse complement motif     Consensus sequence: TTTCATWAAAT

---

Dataset #: 1

Motif ID: 17

Motif name: Motif 17

Original motif     Consensus sequence: TTAGWTWATAA	Reverse complement motif     Consensus sequence: TTATWAWCTAA

Best Matches for Significant Motif ID 17 (Highest to Lowest)

Dataset #:	1
Motif ID:	5
Motif name:	Motif 5
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	3
Number of overlap:	11
Similarity score:	0.09375

Alignment:
AATTYDGAARTAWW
-TTATWAWCTAA--

Original motif     Consensus sequence: AATTYDGAARTAWW	Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

---

Dataset #:	1
Motif ID:	10
Motif name:	Motif 10
Matching format of first motif:	Original Motif
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	1
Number of overlap:	11
Similarity score:	0.102273

Alignment:
TTTCATWAAAT
TTAGWTWATAA

Original motif     Consensus sequence: ATTTWATGAAA	Reverse complement motif     Consensus sequence: TTTCATWAAAT

---

Dataset #:	1
Motif ID:	7
Motif name:	Motif 7
Matching format of first motif:	Original Motif
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	1
Number of overlap:	11
Similarity score:	0.102273

Alignment:
TGATTTTAWKATTT
---TTAGWTWATAA

Original motif     Consensus sequence: AAATRWTAAAATCA	Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

---

Dataset #:	1
Motif ID:	8
Motif name:	Motif 8
Matching format of first motif:	Original Motif
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	2
Number of overlap:	11
Similarity score:	0.109848

Alignment:
TTTDAWATATHATT
-TTAGWTWATAA--

Original motif     Consensus sequence: AATHATATWTHAAA	Reverse complement motif     Consensus sequence: TTTDAWATATHATT

---

Dataset #:	1
Motif ID:	18
Motif name:	Motif 18
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	3
Number of overlap:	11
Similarity score:	0.113636

Alignment:
TTCWTAGATTAWA
TTATWAWCTAA--

Original motif     Consensus sequence: TTCWTAGATTAWA	Reverse complement motif     Consensus sequence: TWTAATCTAWGAA

---

Dataset #:	1
Motif ID:	14
Motif name:	Motif 14
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	2
Number of overlap:	11
Similarity score:	0.113636

Alignment:
ATMACAATAAAA
TTATWAWCTAA-

Original motif     Consensus sequence: ATMACAATAAAA	Reverse complement motif     Consensus sequence: TTTTATTGTYAT

---

Dataset #:	1
Motif ID:	4
Motif name:	Motif 4
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	2
Number of overlap:	11
Similarity score:	0.113636

Alignment:
AAATTKTATTTAWT
--TTATWAWCTAA-

Original motif     Consensus sequence: AWTAAATAYAATTT	Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

---

Dataset #:	1
Motif ID:	2
Motif name:	Motif 2
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	3
Number of overlap:	11
Similarity score:	0.118881

Alignment:
AWAAAWTWAAASWA
-TTAGWTWATAA--

Original motif     Consensus sequence: AWAAAWTWAAASWA	Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

---

Dataset #:	1
Motif ID:	15
Motif name:	Motif 15
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	1
Number of overlap:	11
Similarity score:	0.125

Alignment:
ACAAWTRATTTTGA
TTAGWTWATAA---

Original motif     Consensus sequence: ACAAWTRATTTTGA	Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT

---

Dataset #:	1
Motif ID:	9
Motif name:	Motif 9
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	1
Number of overlap:	10
Similarity score:	0.6125

Alignment:
-AWTTATGAAA
TTATWAWCTAA

Original motif     Consensus sequence: TTTCATAAWT	Reverse complement motif     Consensus sequence: AWTTATGAAA

---

Dataset #: 1

Motif ID: 10

Motif name: Motif 10

Original motif     Consensus sequence: ATTTWATGAAA	Reverse complement motif     Consensus sequence: TTTCATWAAAT

Best Matches for Significant Motif ID 10 (Highest to Lowest)

Dataset #:	1
Motif ID:	4
Motif name:	Motif 4
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	3
Number of overlap:	11
Similarity score:	0.0795455

Alignment:
AWTAAATAYAATTT
--TTTCATWAAAT-

Original motif     Consensus sequence: AWTAAATAYAATTT	Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

---

Dataset #:	1
Motif ID:	7
Motif name:	Motif 7
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	2
Number of overlap:	11
Similarity score:	0.0795455

Alignment:
AAATRWTAAAATCA
--TTTCATWAAAT-

Original motif     Consensus sequence: AAATRWTAAAATCA	Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

---

Dataset #:	1
Motif ID:	17
Motif name:	Motif 17
Matching format of first motif:	Original Motif
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	1
Number of overlap:	11
Similarity score:	0.102273

Alignment:
TTATWAWCTAA
ATTTWATGAAA

Original motif     Consensus sequence: TTAGWTWATAA	Reverse complement motif     Consensus sequence: TTATWAWCTAA

---

Dataset #:	1
Motif ID:	14
Motif name:	Motif 14
Matching format of first motif:	Original Motif
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	2
Number of overlap:	11
Similarity score:	0.102273

Alignment:
TTTTATTGTYAT
ATTTWATGAAA-

Original motif     Consensus sequence: ATMACAATAAAA	Reverse complement motif     Consensus sequence: TTTTATTGTYAT

---

Dataset #:	1
Motif ID:	8
Motif name:	Motif 8
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	1
Number of overlap:	11
Similarity score:	0.109848

Alignment:
TTTDAWATATHATT
TTTCATWAAAT---

Original motif     Consensus sequence: AATHATATWTHAAA	Reverse complement motif     Consensus sequence: TTTDAWATATHATT

---

Dataset #:	1
Motif ID:	5
Motif name:	Motif 5
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	3
Number of overlap:	11
Similarity score:	0.113636

Alignment:
AATTYDGAARTAWW
-ATTTWATGAAA--

Original motif     Consensus sequence: AATTYDGAARTAWW	Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

---

Dataset #:	1
Motif ID:	18
Motif name:	Motif 18
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	3
Number of overlap:	11
Similarity score:	0.113636

Alignment:
TWTAATCTAWGAA
TTTCATWAAAT--

Original motif     Consensus sequence: TTCWTAGATTAWA	Reverse complement motif     Consensus sequence: TWTAATCTAWGAA

---

Dataset #:	1
Motif ID:	2
Motif name:	Motif 2
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	4
Number of overlap:	11
Similarity score:	0.113636

Alignment:
TWSTTTWAWTTTWT
---TTTCATWAAAT

Original motif     Consensus sequence: AWAAAWTWAAASWA	Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

---

Dataset #:	1
Motif ID:	9
Motif name:	Motif 9
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	1
Number of overlap:	10
Similarity score:	0.55

Alignment:
-TTTCATAAWT
TTTCATWAAAT

Original motif     Consensus sequence: TTTCATAAWT	Reverse complement motif     Consensus sequence: AWTTATGAAA

---

Dataset #:	1
Motif ID:	19
Motif name:	Motif 19
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	2
Number of overlap:	10
Similarity score:	0.6

Alignment:
-TTMAAAGATTT
TTTCATWAAAT-

Original motif     Consensus sequence: TTMAAAGATTT	Reverse complement motif     Consensus sequence: AAATCTTTYAA

---

Dataset #: 1

Motif ID: 19

Motif name: Motif 19

Original motif     Consensus sequence: TTMAAAGATTT	Reverse complement motif     Consensus sequence: AAATCTTTYAA

Best Matches for Significant Motif ID 19 (Highest to Lowest)

Dataset #:	1
Motif ID:	18
Motif name:	Motif 18
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	3
Number of overlap:	11
Similarity score:	0.0681818

Alignment:
TTCWTAGATTAWA
TTMAAAGATTT--

Original motif     Consensus sequence: TTCWTAGATTAWA	Reverse complement motif     Consensus sequence: TWTAATCTAWGAA

---

Dataset #:	1
Motif ID:	7
Motif name:	Motif 7
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	4
Number of overlap:	11
Similarity score:	0.0681818

Alignment:
AAATRWTAAAATCA
---AAATCTTTYAA

Original motif     Consensus sequence: AAATRWTAAAATCA	Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

---

Dataset #:	1
Motif ID:	15
Motif name:	Motif 15
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	3
Number of overlap:	11
Similarity score:	0.102273

Alignment:
ACAAWTRATTTTGA
-AAATCTTTYAA--

Original motif     Consensus sequence: ACAAWTRATTTTGA	Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT

---

Dataset #:	1
Motif ID:	4
Motif name:	Motif 4
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	3
Number of overlap:	11
Similarity score:	0.102273

Alignment:
AAATTKTATTTAWT
-AAATCTTTYAA--

Original motif     Consensus sequence: AWTAAATAYAATTT	Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

---

Dataset #:	1
Motif ID:	8
Motif name:	Motif 8
Matching format of first motif:	Original Motif
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	2
Number of overlap:	11
Similarity score:	0.106061

Alignment:
TTTDAWATATHATT
--TTMAAAGATTT-

Original motif     Consensus sequence: AATHATATWTHAAA	Reverse complement motif     Consensus sequence: TTTDAWATATHATT

---

Dataset #:	1
Motif ID:	3
Motif name:	Motif 3
Matching format of first motif:	Original Motif
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	1
Number of overlap:	11
Similarity score:	0.110646

Alignment:
AWGKAAWTTTT
TTMAAAGATTT

Original motif     Consensus sequence: AAAAWTTRCWT	Reverse complement motif     Consensus sequence: AWGKAAWTTTT

---

Dataset #:	1
Motif ID:	5
Motif name:	Motif 5
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	2
Number of overlap:	11
Similarity score:	0.125

Alignment:
WWTAKTTCDKAATT
-AAATCTTTYAA--

Original motif     Consensus sequence: AATTYDGAARTAWW	Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

---

Dataset #:	1
Motif ID:	14
Motif name:	Motif 14
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	2
Number of overlap:	11
Similarity score:	0.125

Alignment:
ATMACAATAAAA
-AAATCTTTYAA

Original motif     Consensus sequence: ATMACAATAAAA	Reverse complement motif     Consensus sequence: TTTTATTGTYAT

---

Dataset #:	1
Motif ID:	10
Motif name:	Motif 10
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	2
Number of overlap:	10
Similarity score:	0.6

Alignment:
ATTTWATGAAA-
-AAATCTTTYAA

Original motif     Consensus sequence: ATTTWATGAAA	Reverse complement motif     Consensus sequence: TTTCATWAAAT

---

Dataset #:	1
Motif ID:	16
Motif name:	Motif 16
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	1
Number of overlap:	10
Similarity score:	0.6125

Alignment:
-ATTCATTTTT
AAATCTTTYAA

Original motif     Consensus sequence: AAAAATGAAT	Reverse complement motif     Consensus sequence: ATTCATTTTT

---

Best Matches for Each Motif (Highest to Lowest)

Dataset #: 1

Motif ID: 1

Motif name: Motif 1

Original motif     Consensus sequence: RGRAGARRGARRAR	Reverse complement motif     Consensus sequence: MTMMTCMMTCTKCK

Best Matches for Motif ID 1 (Highest to Lowest)

Dataset #:	1
Motif ID:	2
Motif name:	Motif 2
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	2
Number of overlap:	13
Similarity score:	0.0388225

Alignment:
AWAAAWTWAAASWA-
-RGRAGARRGARRAR

Original motif     Consensus sequence: AWAAAWTWAAASWA	Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

---

Dataset #:	1
Motif ID:	6
Motif name:	Motif 6
Matching format of first motif:	Original Motif
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	4
Number of overlap:	11
Similarity score:	1.03508

Alignment:
---MSGGGGCGGGGYSG
RGRAGARRGARRAR---

Original motif     Consensus sequence: CSKCCCCGCCCCSY	Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG

---

Dataset #:	1
Motif ID:	5
Motif name:	Motif 5
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	6
Number of overlap:	9
Similarity score:	2.03222

Alignment:
AATTYDGAARTAWW-----
-----RGRAGARRGARRAR

Original motif     Consensus sequence: AATTYDGAARTAWW	Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

---

Dataset #:	1
Motif ID:	8
Motif name:	Motif 8
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	7
Number of overlap:	8
Similarity score:	2.54053

Alignment:
------AATHATATWTHAAA
MTMMTCMMTCTKCK------

Original motif     Consensus sequence: AATHATATWTHAAA	Reverse complement motif     Consensus sequence: TTTDAWATATHATT

---

Dataset #:	1
Motif ID:	3
Motif name:	Motif 3
Matching format of first motif:	Original Motif
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	6
Number of overlap:	6
Similarity score:	3.53528

Alignment:
--------AWGKAAWTTTT
RGRAGARRGARRAR-----

Original motif     Consensus sequence: AAAAWTTRCWT	Reverse complement motif     Consensus sequence: AWGKAAWTTTT

---

Dataset #:	1
Motif ID:	20
Motif name:	Motif 20
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	1
Number of overlap:	6
Similarity score:	3.54145

Alignment:
--------TTTTAT
MTMMTCMMTCTKCK

Original motif     Consensus sequence: ATAAAA	Reverse complement motif     Consensus sequence: TTTTAT

---

Dataset #:	1
Motif ID:	14
Motif name:	Motif 14
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	7
Number of overlap:	6
Similarity score:	3.54145

Alignment:
--------TTTTATTGTYAT
MTMMTCMMTCTKCK------

Original motif     Consensus sequence: ATMACAATAAAA	Reverse complement motif     Consensus sequence: TTTTATTGTYAT

---

Dataset #:	1
Motif ID:	18
Motif name:	Motif 18
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	10
Number of overlap:	4
Similarity score:	4.50266

Alignment:
----------TTCWTAGATTAWA
MTMMTCMMTCTKCK---------

Original motif     Consensus sequence: TTCWTAGATTAWA	Reverse complement motif     Consensus sequence: TWTAATCTAWGAA

---

Dataset #:	1
Motif ID:	17
Motif name:	Motif 17
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	8
Number of overlap:	4
Similarity score:	4.52319

Alignment:
----------TTATWAWCTAA
MTMMTCMMTCTKCK-------

Original motif     Consensus sequence: TTAGWTWATAA	Reverse complement motif     Consensus sequence: TTATWAWCTAA

---

Dataset #:	1
Motif ID:	13
Motif name:	Motif 13
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	5
Number of overlap:	4
Similarity score:	4.52319

Alignment:
----------TTATTTWT
MTMMTCMMTCTKCK----

Original motif     Consensus sequence: AWAAATAA	Reverse complement motif     Consensus sequence: TTATTTWT

---

Dataset #:	1
Motif ID:	7
Motif name:	Motif 7
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	11
Number of overlap:	4
Similarity score:	4.52795

Alignment:
----------TGATTTTAWKATTT
MTMMTCMMTCTKCK----------

Original motif     Consensus sequence: AAATRWTAAAATCA	Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

---

Dataset #: 1

Motif ID: 2

Motif name: Motif 2

Original motif     Consensus sequence: AWAAAWTWAAASWA	Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

Best Matches for Motif ID 2 (Highest to Lowest)

Dataset #:	1
Motif ID:	7
Motif name:	Motif 7
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	1
Number of overlap:	14
Similarity score:	0.0394231

Alignment:
TGATTTTAWKATTT
TWSTTTWAWTTTWT

Original motif     Consensus sequence: AAATRWTAAAATCA	Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

---

Dataset #:	1
Motif ID:	4
Motif name:	Motif 4
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	1
Number of overlap:	14
Similarity score:	0.0449176

Alignment:
AAATTKTATTTAWT
TWSTTTWAWTTTWT

Original motif     Consensus sequence: AWTAAATAYAATTT	Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

---

Dataset #:	1
Motif ID:	8
Motif name:	Motif 8
Matching format of first motif:	Original Motif
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	1
Number of overlap:	14
Similarity score:	0.0594551

Alignment:
TTTDAWATATHATT
AWAAAWTWAAASWA

Original motif     Consensus sequence: AATHATATWTHAAA	Reverse complement motif     Consensus sequence: TTTDAWATATHATT

---

Dataset #:	1
Motif ID:	5
Motif name:	Motif 5
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	1
Number of overlap:	14
Similarity score:	0.067239

Alignment:
WWTAKTTCDKAATT
TWSTTTWAWTTTWT

Original motif     Consensus sequence: AATTYDGAARTAWW	Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

---

Dataset #:	1
Motif ID:	1
Motif name:	Motif 1
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	2
Number of overlap:	13
Similarity score:	0.564853

Alignment:
-RGRAGARRGARRAR
AWAAAWTWAAASWA-

Original motif     Consensus sequence: RGRAGARRGARRAR	Reverse complement motif     Consensus sequence: MTMMTCMMTCTKCK

---

Dataset #:	1
Motif ID:	14
Motif name:	Motif 14
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	1
Number of overlap:	12
Similarity score:	1.05785

Alignment:
ATMACAATAAAA--
AWAAAWTWAAASWA

Original motif     Consensus sequence: ATMACAATAAAA	Reverse complement motif     Consensus sequence: TTTTATTGTYAT

---

Dataset #:	1
Motif ID:	3
Motif name:	Motif 3
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	1
Number of overlap:	11
Similarity score:	1.55323

Alignment:
---AWGKAAWTTTT
TWSTTTWAWTTTWT

Original motif     Consensus sequence: AAAAWTTRCWT	Reverse complement motif     Consensus sequence: AWGKAAWTTTT

---

Dataset #:	1
Motif ID:	10
Motif name:	Motif 10
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	1
Number of overlap:	11
Similarity score:	1.55691

Alignment:
ATTTWATGAAA---
AWAAAWTWAAASWA

Original motif     Consensus sequence: ATTTWATGAAA	Reverse complement motif     Consensus sequence: TTTCATWAAAT

---

Dataset #:	1
Motif ID:	15
Motif name:	Motif 15
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	4
Number of overlap:	11
Similarity score:	1.56565

Alignment:
---TCAAAATKAWTTGT
TWSTTTWAWTTTWT---

Original motif     Consensus sequence: ACAAWTRATTTTGA	Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT

---

Dataset #:	1
Motif ID:	17
Motif name:	Motif 17
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	1
Number of overlap:	11
Similarity score:	1.5674

Alignment:
TTAGWTWATAA---
AWAAAWTWAAASWA

Original motif     Consensus sequence: TTAGWTWATAA	Reverse complement motif     Consensus sequence: TTATWAWCTAA

---

Dataset #: 1

Motif ID: 3

Motif name: Motif 3

Original motif     Consensus sequence: AAAAWTTRCWT	Reverse complement motif     Consensus sequence: AWGKAAWTTTT

Best Matches for Motif ID 3 (Highest to Lowest)

Dataset #:	1
Motif ID:	4
Motif name:	Motif 4
Matching format of first motif:	Original Motif
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	4
Number of overlap:	11
Similarity score:	0.0786484

Alignment:
AAATTKTATTTAWT
AAAAWTTRCWT---

Original motif     Consensus sequence: AWTAAATAYAATTT	Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

---

Dataset #:	1
Motif ID:	8
Motif name:	Motif 8
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	4
Number of overlap:	11
Similarity score:	0.0820375

Alignment:
AATHATATWTHAAA
AWGKAAWTTTT---

Original motif     Consensus sequence: AATHATATWTHAAA	Reverse complement motif     Consensus sequence: TTTDAWATATHATT

---

Dataset #:	1
Motif ID:	7
Motif name:	Motif 7
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	4
Number of overlap:	11
Similarity score:	0.083433

Alignment:
TGATTTTAWKATTT
---AWGKAAWTTTT

Original motif     Consensus sequence: AAATRWTAAAATCA	Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

---

Dataset #:	1
Motif ID:	15
Motif name:	Motif 15
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	1
Number of overlap:	11
Similarity score:	0.0852273

Alignment:
ACAAWTRATTTTGA
AAAAWTTRCWT---

Original motif     Consensus sequence: ACAAWTRATTTTGA	Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT

---

Dataset #:	1
Motif ID:	2
Motif name:	Motif 2
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	2
Number of overlap:	11
Similarity score:	0.0867914

Alignment:
TWSTTTWAWTTTWT
--AWGKAAWTTTT-

Original motif     Consensus sequence: AWAAAWTWAAASWA	Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

---

Dataset #:	1
Motif ID:	19
Motif name:	Motif 19
Matching format of first motif:	Original Motif
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	1
Number of overlap:	11
Similarity score:	0.0941986

Alignment:
AAATCTTTYAA
AAAAWTTRCWT

Original motif     Consensus sequence: TTMAAAGATTT	Reverse complement motif     Consensus sequence: AAATCTTTYAA

---

Dataset #:	1
Motif ID:	5
Motif name:	Motif 5
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	1
Number of overlap:	11
Similarity score:	0.103618

Alignment:
AATTYDGAARTAWW
---AWGKAAWTTTT

Original motif     Consensus sequence: AATTYDGAARTAWW	Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

---

Dataset #:	1
Motif ID:	16
Motif name:	Motif 16
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	1
Number of overlap:	10
Similarity score:	0.578289

Alignment:
-ATTCATTTTT
AWGKAAWTTTT

Original motif     Consensus sequence: AAAAATGAAT	Reverse complement motif     Consensus sequence: ATTCATTTTT

---

Dataset #:	1
Motif ID:	18
Motif name:	Motif 18
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	4
Number of overlap:	10
Similarity score:	0.602632

Alignment:
-TWTAATCTAWGAA
AWGKAAWTTTT---

Original motif     Consensus sequence: TTCWTAGATTAWA	Reverse complement motif     Consensus sequence: TWTAATCTAWGAA

---

Dataset #:	1
Motif ID:	17
Motif name:	Motif 17
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	3
Number of overlap:	9
Similarity score:	1.09393

Alignment:
--TTAGWTWATAA
AWGKAAWTTTT--

Original motif     Consensus sequence: TTAGWTWATAA	Reverse complement motif     Consensus sequence: TTATWAWCTAA

---

Dataset #: 1

Motif ID: 4

Motif name: Motif 4

Original motif     Consensus sequence: AWTAAATAYAATTT	Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

Best Matches for Motif ID 4 (Highest to Lowest)

Dataset #:	1
Motif ID:	2
Motif name:	Motif 2
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	1
Number of overlap:	14
Similarity score:	0.101648

Alignment:
TWSTTTWAWTTTWT
AAATTKTATTTAWT

Original motif     Consensus sequence: AWAAAWTWAAASWA	Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

---

Dataset #:	1
Motif ID:	7
Motif name:	Motif 7
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	1
Number of overlap:	14
Similarity score:	0.107143

Alignment:
TGATTTTAWKATTT
AAATTKTATTTAWT

Original motif     Consensus sequence: AAATRWTAAAATCA	Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

---

Dataset #:	1
Motif ID:	5
Motif name:	Motif 5
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	1
Number of overlap:	14
Similarity score:	0.111607

Alignment:
AATTYDGAARTAWW
AAATTKTATTTAWT

Original motif     Consensus sequence: AATTYDGAARTAWW	Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

---

Dataset #:	1
Motif ID:	15
Motif name:	Motif 15
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	1
Number of overlap:	14
Similarity score:	0.125

Alignment:
ACAAWTRATTTTGA
AAATTKTATTTAWT

Original motif     Consensus sequence: ACAAWTRATTTTGA	Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT

---

Dataset #:	1
Motif ID:	8
Motif name:	Motif 8
Matching format of first motif:	Original Motif
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	2
Number of overlap:	13
Similarity score:	0.596154

Alignment:
TTTDAWATATHATT-
-AWTAAATAYAATTT

Original motif     Consensus sequence: AATHATATWTHAAA	Reverse complement motif     Consensus sequence: TTTDAWATATHATT

---

Dataset #:	1
Motif ID:	14
Motif name:	Motif 14
Matching format of first motif:	Original Motif
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	1
Number of overlap:	12
Similarity score:	1.125

Alignment:
TTTTATTGTYAT--
AWTAAATAYAATTT

Original motif     Consensus sequence: ATMACAATAAAA	Reverse complement motif     Consensus sequence: TTTTATTGTYAT

---

Dataset #:	1
Motif ID:	18
Motif name:	Motif 18
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	2
Number of overlap:	12
Similarity score:	1.125

Alignment:
--TTCWTAGATTAWA
AWTAAATAYAATTT-

Original motif     Consensus sequence: TTCWTAGATTAWA	Reverse complement motif     Consensus sequence: TWTAATCTAWGAA

---

Dataset #:	1
Motif ID:	10
Motif name:	Motif 10
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	1
Number of overlap:	11
Similarity score:	1.57955

Alignment:
---TTTCATWAAAT
AAATTKTATTTAWT

Original motif     Consensus sequence: ATTTWATGAAA	Reverse complement motif     Consensus sequence: TTTCATWAAAT

---

Dataset #:	1
Motif ID:	3
Motif name:	Motif 3
Matching format of first motif:	Original Motif
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	1
Number of overlap:	11
Similarity score:	1.5951

Alignment:
AWGKAAWTTTT---
AWTAAATAYAATTT

Original motif     Consensus sequence: AAAAWTTRCWT	Reverse complement motif     Consensus sequence: AWGKAAWTTTT

---

Dataset #:	1
Motif ID:	19
Motif name:	Motif 19
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	1
Number of overlap:	11
Similarity score:	1.61364

Alignment:
AAATCTTTYAA---
AAATTKTATTTAWT

Original motif     Consensus sequence: TTMAAAGATTT	Reverse complement motif     Consensus sequence: AAATCTTTYAA

---

Dataset #: 1

Motif ID: 5

Motif name: Motif 5

Original motif     Consensus sequence: AATTYDGAARTAWW	Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

Best Matches for Motif ID 5 (Highest to Lowest)

Dataset #:	1
Motif ID:	4
Motif name:	Motif 4
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	1
Number of overlap:	14
Similarity score:	0.0741071

Alignment:
AWTAAATAYAATTT
WWTAKTTCDKAATT

Original motif     Consensus sequence: AWTAAATAYAATTT	Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

---

Dataset #:	1
Motif ID:	7
Motif name:	Motif 7
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	1
Number of overlap:	14
Similarity score:	0.0763393

Alignment:
TGATTTTAWKATTT
WWTAKTTCDKAATT

Original motif     Consensus sequence: AAATRWTAAAATCA	Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

---

Dataset #:	1
Motif ID:	8
Motif name:	Motif 8
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	1
Number of overlap:	14
Similarity score:	0.0852679

Alignment:
TTTDAWATATHATT
WWTAKTTCDKAATT

Original motif     Consensus sequence: AATHATATWTHAAA	Reverse complement motif     Consensus sequence: TTTDAWATATHATT

---

Dataset #:	1
Motif ID:	2
Motif name:	Motif 2
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	1
Number of overlap:	14
Similarity score:	0.0864698

Alignment:
TWSTTTWAWTTTWT
WWTAKTTCDKAATT

Original motif     Consensus sequence: AWAAAWTWAAASWA	Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

---

Dataset #:	1
Motif ID:	18
Motif name:	Motif 18
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	2
Number of overlap:	12
Similarity score:	1.06667

Alignment:
--TTCWTAGATTAWA
AATTYDGAARTAWW-

Original motif     Consensus sequence: TTCWTAGATTAWA	Reverse complement motif     Consensus sequence: TWTAATCTAWGAA

---

Dataset #:	1
Motif ID:	14
Motif name:	Motif 14
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	1
Number of overlap:	12
Similarity score:	1.08229

Alignment:
TTTTATTGTYAT--
WWTAKTTCDKAATT

Original motif     Consensus sequence: ATMACAATAAAA	Reverse complement motif     Consensus sequence: TTTTATTGTYAT

---

Dataset #:	1
Motif ID:	15
Motif name:	Motif 15
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	4
Number of overlap:	11
Similarity score:	1.55625

Alignment:
ACAAWTRATTTTGA---
---WWTAKTTCDKAATT

Original motif     Consensus sequence: ACAAWTRATTTTGA	Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT

---

Dataset #:	1
Motif ID:	3
Motif name:	Motif 3
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	1
Number of overlap:	11
Similarity score:	1.58257

Alignment:
---AAAAWTTRCWT
WWTAKTTCDKAATT

Original motif     Consensus sequence: AAAAWTTRCWT	Reverse complement motif     Consensus sequence: AWGKAAWTTTT

---

Dataset #:	1
Motif ID:	10
Motif name:	Motif 10
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	1
Number of overlap:	11
Similarity score:	1.58466

Alignment:
---TTTCATWAAAT
WWTAKTTCDKAATT

Original motif     Consensus sequence: ATTTWATGAAA	Reverse complement motif     Consensus sequence: TTTCATWAAAT

---

Dataset #:	1
Motif ID:	9
Motif name:	Motif 9
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	1
Number of overlap:	10
Similarity score:	2.03125

Alignment:
----TTTCATAAWT
WWTAKTTCDKAATT

Original motif     Consensus sequence: TTTCATAAWT	Reverse complement motif     Consensus sequence: AWTTATGAAA

---

Dataset #: 1

Motif ID: 6

Motif name: Motif 6

Original motif     Consensus sequence: CSKCCCCGCCCCSY	Reverse complement motif     Consensus sequence: MSGGGGCGGGGYSG

Best Matches for Motif ID 6 (Highest to Lowest)

Dataset #:	1
Motif ID:	1
Motif name:	Motif 1
Matching format of first motif:	Original Motif
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	4
Number of overlap:	11
Similarity score:	0.0157992

Alignment:
MTMMTCMMTCTKCK---
---CSKCCCCGCCCCSY

Original motif     Consensus sequence: RGRAGARRGARRAR	Reverse complement motif     Consensus sequence: MTMMTCMMTCTKCK

---

Dataset #: 1

Motif ID: 7

Motif name: Motif 7

Original motif     Consensus sequence: AAATRWTAAAATCA	Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

Best Matches for Motif ID 7 (Highest to Lowest)

Dataset #:	1
Motif ID:	2
Motif name:	Motif 2
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	1
Number of overlap:	14
Similarity score:	0.0961539

Alignment:
TWSTTTWAWTTTWT
TGATTTTAWKATTT

Original motif     Consensus sequence: AWAAAWTWAAASWA	Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

---

Dataset #:	1
Motif ID:	4
Motif name:	Motif 4
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	1
Number of overlap:	14
Similarity score:	0.107143

Alignment:
AAATTKTATTTAWT
TGATTTTAWKATTT

Original motif     Consensus sequence: AWTAAATAYAATTT	Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

---

Dataset #:	1
Motif ID:	5
Motif name:	Motif 5
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	1
Number of overlap:	14
Similarity score:	0.113839

Alignment:
WWTAKTTCDKAATT
TGATTTTAWKATTT

Original motif     Consensus sequence: AATTYDGAARTAWW	Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

---

Dataset #:	1
Motif ID:	8
Motif name:	Motif 8
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	2
Number of overlap:	13
Similarity score:	0.625

Alignment:
-AATHATATWTHAAA
AAATRWTAAAATCA-

Original motif     Consensus sequence: AATHATATWTHAAA	Reverse complement motif     Consensus sequence: TTTDAWATATHATT

---

Dataset #:	1
Motif ID:	14
Motif name:	Motif 14
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	1
Number of overlap:	12
Similarity score:	1.10417

Alignment:
--ATMACAATAAAA
AAATRWTAAAATCA

Original motif     Consensus sequence: ATMACAATAAAA	Reverse complement motif     Consensus sequence: TTTTATTGTYAT

---

Dataset #:	1
Motif ID:	18
Motif name:	Motif 18
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	2
Number of overlap:	12
Similarity score:	1.10417

Alignment:
TWTAATCTAWGAA--
-TGATTTTAWKATTT

Original motif     Consensus sequence: TTCWTAGATTAWA	Reverse complement motif     Consensus sequence: TWTAATCTAWGAA

---

Dataset #:	1
Motif ID:	15
Motif name:	Motif 15
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	3
Number of overlap:	12
Similarity score:	1.125

Alignment:
--TCAAAATKAWTTGT
TGATTTTAWKATTT--

Original motif     Consensus sequence: ACAAWTRATTTTGA	Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT

---

Dataset #:	1
Motif ID:	19
Motif name:	Motif 19
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	1
Number of overlap:	11
Similarity score:	1.56818

Alignment:
---TTMAAAGATTT
TGATTTTAWKATTT

Original motif     Consensus sequence: TTMAAAGATTT	Reverse complement motif     Consensus sequence: AAATCTTTYAA

---

Dataset #:	1
Motif ID:	10
Motif name:	Motif 10
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	1
Number of overlap:	11
Similarity score:	1.59091

Alignment:
---TTTCATWAAAT
TGATTTTAWKATTT

Original motif     Consensus sequence: ATTTWATGAAA	Reverse complement motif     Consensus sequence: TTTCATWAAAT

---

Dataset #:	1
Motif ID:	3
Motif name:	Motif 3
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	1
Number of overlap:	11
Similarity score:	1.59988

Alignment:
---AWGKAAWTTTT
TGATTTTAWKATTT

Original motif     Consensus sequence: AAAAWTTRCWT	Reverse complement motif     Consensus sequence: AWGKAAWTTTT

---

Dataset #: 1

Motif ID: 8

Motif name: Motif 8

Original motif     Consensus sequence: AATHATATWTHAAA	Reverse complement motif     Consensus sequence: TTTDAWATATHATT

Best Matches for Motif ID 8 (Highest to Lowest)

Dataset #:	1
Motif ID:	2
Motif name:	Motif 2
Matching format of first motif:	Original Motif
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	1
Number of overlap:	14
Similarity score:	0.0675748

Alignment:
TWSTTTWAWTTTWT
AATHATATWTHAAA

Original motif     Consensus sequence: AWAAAWTWAAASWA	Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

---

Dataset #:	1
Motif ID:	5
Motif name:	Motif 5
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	1
Number of overlap:	14
Similarity score:	0.0741568

Alignment:
WWTAKTTCDKAATT
TTTDAWATATHATT

Original motif     Consensus sequence: AATTYDGAARTAWW	Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

---

Dataset #:	1
Motif ID:	4
Motif name:	Motif 4
Matching format of first motif:	Original Motif
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	2
Number of overlap:	13
Similarity score:	0.547543

Alignment:
-AAATTKTATTTAWT
AATHATATWTHAAA-

Original motif     Consensus sequence: AWTAAATAYAATTT	Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

---

Dataset #:	1
Motif ID:	18
Motif name:	Motif 18
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	1
Number of overlap:	13
Similarity score:	0.557158

Alignment:
-TTCWTAGATTAWA
AATHATATWTHAAA

Original motif     Consensus sequence: TTCWTAGATTAWA	Reverse complement motif     Consensus sequence: TWTAATCTAWGAA

---

Dataset #:	1
Motif ID:	7
Motif name:	Motif 7
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	2
Number of overlap:	13
Similarity score:	0.576389

Alignment:
-TGATTTTAWKATTT
TTTDAWATATHATT-

Original motif     Consensus sequence: AAATRWTAAAATCA	Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

---

Dataset #:	1
Motif ID:	15
Motif name:	Motif 15
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	3
Number of overlap:	12
Similarity score:	1.05903

Alignment:
ACAAWTRATTTTGA--
--AATHATATWTHAAA

Original motif     Consensus sequence: ACAAWTRATTTTGA	Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT

---

Dataset #:	1
Motif ID:	3
Motif name:	Motif 3
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	1
Number of overlap:	11
Similarity score:	1.54987

Alignment:
AAAAWTTRCWT---
TTTDAWATATHATT

Original motif     Consensus sequence: AAAAWTTRCWT	Reverse complement motif     Consensus sequence: AWGKAAWTTTT

---

Dataset #:	1
Motif ID:	10
Motif name:	Motif 10
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	1
Number of overlap:	11
Similarity score:	1.56124

Alignment:
TTTCATWAAAT---
TTTDAWATATHATT

Original motif     Consensus sequence: ATTTWATGAAA	Reverse complement motif     Consensus sequence: TTTCATWAAAT

---

Dataset #:	1
Motif ID:	9
Motif name:	Motif 9
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	1
Number of overlap:	10
Similarity score:	2.04306

Alignment:
TTTCATAAWT----
TTTDAWATATHATT

Original motif     Consensus sequence: TTTCATAAWT	Reverse complement motif     Consensus sequence: AWTTATGAAA

---

Dataset #:	1
Motif ID:	17
Motif name:	Motif 17
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	2
Number of overlap:	10
Similarity score:	2.04722

Alignment:
TTATWAWCTAA----
-TTTDAWATATHATT

Original motif     Consensus sequence: TTAGWTWATAA	Reverse complement motif     Consensus sequence: TTATWAWCTAA

---

Dataset #: 1

Motif ID: 9

Motif name: Motif 9

Original motif     Consensus sequence: TTTCATAAWT	Reverse complement motif     Consensus sequence: AWTTATGAAA

Best Matches for Motif ID 9 (Highest to Lowest)

Dataset #:	1
Motif ID:	10
Motif name:	Motif 10
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	2
Number of overlap:	10
Similarity score:	0.01875

Alignment:
ATTTWATGAAA
-AWTTATGAAA

Original motif     Consensus sequence: ATTTWATGAAA	Reverse complement motif     Consensus sequence: TTTCATWAAAT

---

Dataset #:	1
Motif ID:	5
Motif name:	Motif 5
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	5
Number of overlap:	10
Similarity score:	0.0375

Alignment:
AATTYDGAARTAWW
----AWTTATGAAA

Original motif     Consensus sequence: AATTYDGAARTAWW	Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

---

Dataset #:	1
Motif ID:	7
Motif name:	Motif 7
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	2
Number of overlap:	10
Similarity score:	0.04375

Alignment:
AAATRWTAAAATCA
---AWTTATGAAA-

Original motif     Consensus sequence: AAATRWTAAAATCA	Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

---

Dataset #:	1
Motif ID:	16
Motif name:	Motif 16
Matching format of first motif:	Original Motif
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	1
Number of overlap:	10
Similarity score:	0.05625

Alignment:
ATTCATTTTT
TTTCATAAWT

Original motif     Consensus sequence: AAAAATGAAT	Reverse complement motif     Consensus sequence: ATTCATTTTT

---

Dataset #:	1
Motif ID:	4
Motif name:	Motif 4
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	1
Number of overlap:	10
Similarity score:	0.05625

Alignment:
AWTAAATAYAATTT
----AWTTATGAAA

Original motif     Consensus sequence: AWTAAATAYAATTT	Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

---

Dataset #:	1
Motif ID:	8
Motif name:	Motif 8
Matching format of first motif:	Original Motif
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	5
Number of overlap:	10
Similarity score:	0.0604166

Alignment:
TTTDAWATATHATT
----TTTCATAAWT

Original motif     Consensus sequence: AATHATATWTHAAA	Reverse complement motif     Consensus sequence: TTTDAWATATHATT

---

Dataset #:	1
Motif ID:	14
Motif name:	Motif 14
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	1
Number of overlap:	10
Similarity score:	0.06875

Alignment:
ATMACAATAAAA
--AWTTATGAAA

Original motif     Consensus sequence: ATMACAATAAAA	Reverse complement motif     Consensus sequence: TTTTATTGTYAT

---

Dataset #:	1
Motif ID:	2
Motif name:	Motif 2
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	5
Number of overlap:	10
Similarity score:	0.0706731

Alignment:
AWAAAWTWAAASWA
----AWTTATGAAA

Original motif     Consensus sequence: AWAAAWTWAAASWA	Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

---

Dataset #:	1
Motif ID:	18
Motif name:	Motif 18
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	1
Number of overlap:	10
Similarity score:	0.08125

Alignment:
TTCWTAGATTAWA
---TTTCATAAWT

Original motif     Consensus sequence: TTCWTAGATTAWA	Reverse complement motif     Consensus sequence: TWTAATCTAWGAA

---

Dataset #:	1
Motif ID:	19
Motif name:	Motif 19
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	1
Number of overlap:	10
Similarity score:	0.08125

Alignment:
TTMAAAGATTT
TTTCATAAWT-

Original motif     Consensus sequence: TTMAAAGATTT	Reverse complement motif     Consensus sequence: AAATCTTTYAA

---

Dataset #: 1

Motif ID: 10

Motif name: Motif 10

Original motif     Consensus sequence: ATTTWATGAAA	Reverse complement motif     Consensus sequence: TTTCATWAAAT

Best Matches for Motif ID 10 (Highest to Lowest)

Dataset #:	1
Motif ID:	4
Motif name:	Motif 4
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	3
Number of overlap:	11
Similarity score:	0.0795455

Alignment:
AWTAAATAYAATTT
--TTTCATWAAAT-

Original motif     Consensus sequence: AWTAAATAYAATTT	Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

---

Dataset #:	1
Motif ID:	7
Motif name:	Motif 7
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	2
Number of overlap:	11
Similarity score:	0.0795455

Alignment:
AAATRWTAAAATCA
--TTTCATWAAAT-

Original motif     Consensus sequence: AAATRWTAAAATCA	Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

---

Dataset #:	1
Motif ID:	17
Motif name:	Motif 17
Matching format of first motif:	Original Motif
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	1
Number of overlap:	11
Similarity score:	0.102273

Alignment:
TTATWAWCTAA
ATTTWATGAAA

Original motif     Consensus sequence: TTAGWTWATAA	Reverse complement motif     Consensus sequence: TTATWAWCTAA

---

Dataset #:	1
Motif ID:	14
Motif name:	Motif 14
Matching format of first motif:	Original Motif
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	2
Number of overlap:	11
Similarity score:	0.102273

Alignment:
TTTTATTGTYAT
ATTTWATGAAA-

Original motif     Consensus sequence: ATMACAATAAAA	Reverse complement motif     Consensus sequence: TTTTATTGTYAT

---

Dataset #:	1
Motif ID:	8
Motif name:	Motif 8
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	1
Number of overlap:	11
Similarity score:	0.109848

Alignment:
TTTDAWATATHATT
TTTCATWAAAT---

Original motif     Consensus sequence: AATHATATWTHAAA	Reverse complement motif     Consensus sequence: TTTDAWATATHATT

---

Dataset #:	1
Motif ID:	5
Motif name:	Motif 5
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	3
Number of overlap:	11
Similarity score:	0.113636

Alignment:
AATTYDGAARTAWW
-ATTTWATGAAA--

Original motif     Consensus sequence: AATTYDGAARTAWW	Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

---

Dataset #:	1
Motif ID:	18
Motif name:	Motif 18
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	3
Number of overlap:	11
Similarity score:	0.113636

Alignment:
TWTAATCTAWGAA
TTTCATWAAAT--

Original motif     Consensus sequence: TTCWTAGATTAWA	Reverse complement motif     Consensus sequence: TWTAATCTAWGAA

---

Dataset #:	1
Motif ID:	2
Motif name:	Motif 2
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	4
Number of overlap:	11
Similarity score:	0.113636

Alignment:
TWSTTTWAWTTTWT
---TTTCATWAAAT

Original motif     Consensus sequence: AWAAAWTWAAASWA	Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

---

Dataset #:	1
Motif ID:	9
Motif name:	Motif 9
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	1
Number of overlap:	10
Similarity score:	0.55

Alignment:
-TTTCATAAWT
TTTCATWAAAT

Original motif     Consensus sequence: TTTCATAAWT	Reverse complement motif     Consensus sequence: AWTTATGAAA

---

Dataset #:	1
Motif ID:	19
Motif name:	Motif 19
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	2
Number of overlap:	10
Similarity score:	0.6

Alignment:
-TTMAAAGATTT
TTTCATWAAAT-

Original motif     Consensus sequence: TTMAAAGATTT	Reverse complement motif     Consensus sequence: AAATCTTTYAA

---

Dataset #: 1

Motif ID: 11

Motif name: Motif 11

Original motif     Consensus sequence: AAAACAAA	Reverse complement motif     Consensus sequence: TTTGTTTT

Best Matches for Motif ID 11 (Highest to Lowest)

Dataset #:	1
Motif ID:	14
Motif name:	Motif 14
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	2
Number of overlap:	8
Similarity score:	0.0625

Alignment:
TTTTATTGTYAT
-TTTGTTTT---

Original motif     Consensus sequence: ATMACAATAAAA	Reverse complement motif     Consensus sequence: TTTTATTGTYAT

---

Dataset #:	1
Motif ID:	16
Motif name:	Motif 16
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	2
Number of overlap:	8
Similarity score:	0.0625

Alignment:
AAAAATGAAT
-AAAACAAA-

Original motif     Consensus sequence: AAAAATGAAT	Reverse complement motif     Consensus sequence: ATTCATTTTT

---

Dataset #:	1
Motif ID:	4
Motif name:	Motif 4
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	4
Number of overlap:	8
Similarity score:	0.078125

Alignment:
AAATTKTATTTAWT
---TTTGTTTT---

Original motif     Consensus sequence: AWTAAATAYAATTT	Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

---

Dataset #:	1
Motif ID:	15
Motif name:	Motif 15
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	3
Number of overlap:	8
Similarity score:	0.078125

Alignment:
ACAAWTRATTTTGA
----TTTGTTTT--

Original motif     Consensus sequence: ACAAWTRATTTTGA	Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT

---

Dataset #:	1
Motif ID:	13
Motif name:	Motif 13
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	1
Number of overlap:	8
Similarity score:	0.078125

Alignment:
AWAAATAA
AAAACAAA

Original motif     Consensus sequence: AWAAATAA	Reverse complement motif     Consensus sequence: TTATTTWT

---

Dataset #:	1
Motif ID:	2
Motif name:	Motif 2
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	3
Number of overlap:	8
Similarity score:	0.0805288

Alignment:
AWAAAWTWAAASWA
--AAAACAAA----

Original motif     Consensus sequence: AWAAAWTWAAASWA	Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

---

Dataset #:	1
Motif ID:	17
Motif name:	Motif 17
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	1
Number of overlap:	8
Similarity score:	0.09375

Alignment:
TTAGWTWATAA
TTTGTTTT---

Original motif     Consensus sequence: TTAGWTWATAA	Reverse complement motif     Consensus sequence: TTATWAWCTAA

---

Dataset #:	1
Motif ID:	7
Motif name:	Motif 7
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	7
Number of overlap:	8
Similarity score:	0.09375

Alignment:
TGATTTTAWKATTT
------TTTGTTTT

Original motif     Consensus sequence: AAATRWTAAAATCA	Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

---

Dataset #:	1
Motif ID:	5
Motif name:	Motif 5
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	2
Number of overlap:	8
Similarity score:	0.101562

Alignment:
WWTAKTTCDKAATT
-TTTGTTTT-----

Original motif     Consensus sequence: AATTYDGAARTAWW	Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

---

Dataset #:	1
Motif ID:	3
Motif name:	Motif 3
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	4
Number of overlap:	8
Similarity score:	0.103618

Alignment:
AAAAWTTRCWT
AAAACAAA---

Original motif     Consensus sequence: AAAAWTTRCWT	Reverse complement motif     Consensus sequence: AWGKAAWTTTT

---

Dataset #: 1

Motif ID: 12

Motif name: Motif 12

Original motif     Consensus sequence: AAAGATTT	Reverse complement motif     Consensus sequence: AAATCTTT

Best Matches for Motif ID 12 (Highest to Lowest)

Dataset #:	1
Motif ID:	19
Motif name:	Motif 19
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	4
Number of overlap:	8
Similarity score:	0

Alignment:
AAATCTTTYAA
AAATCTTT---

Original motif     Consensus sequence: TTMAAAGATTT	Reverse complement motif     Consensus sequence: AAATCTTTYAA

---

Dataset #:	1
Motif ID:	15
Motif name:	Motif 15
Matching format of first motif:	Original Motif
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	5
Number of overlap:	8
Similarity score:	0.0625

Alignment:
TCAAAATKAWTTGT
----AAAGATTT--

Original motif     Consensus sequence: ACAAWTRATTTTGA	Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT

---

Dataset #:	1
Motif ID:	7
Motif name:	Motif 7
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	1
Number of overlap:	8
Similarity score:	0.0625

Alignment:
AAATRWTAAAATCA
------AAATCTTT

Original motif     Consensus sequence: AAATRWTAAAATCA	Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

---

Dataset #:	1
Motif ID:	18
Motif name:	Motif 18
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	3
Number of overlap:	8
Similarity score:	0.078125

Alignment:
TWTAATCTAWGAA
--AAATCTTT---

Original motif     Consensus sequence: TTCWTAGATTAWA	Reverse complement motif     Consensus sequence: TWTAATCTAWGAA

---

Dataset #:	1
Motif ID:	4
Motif name:	Motif 4
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	1
Number of overlap:	8
Similarity score:	0.078125

Alignment:
AAATTKTATTTAWT
AAATCTTT------

Original motif     Consensus sequence: AWTAAATAYAATTT	Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

---

Dataset #:	1
Motif ID:	3
Motif name:	Motif 3
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	4
Number of overlap:	8
Similarity score:	0.0822369

Alignment:
AWGKAAWTTTT
---AAATCTTT

Original motif     Consensus sequence: AAAAWTTRCWT	Reverse complement motif     Consensus sequence: AWGKAAWTTTT

---

Dataset #:	1
Motif ID:	16
Motif name:	Motif 16
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	3
Number of overlap:	8
Similarity score:	0.09375

Alignment:
AAAAATGAAT
--AAATCTTT

Original motif     Consensus sequence: AAAAATGAAT	Reverse complement motif     Consensus sequence: ATTCATTTTT

---

Dataset #:	1
Motif ID:	13
Motif name:	Motif 13
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	1
Number of overlap:	8
Similarity score:	0.109375

Alignment:
AWAAATAA
AAAGATTT

Original motif     Consensus sequence: AWAAATAA	Reverse complement motif     Consensus sequence: TTATTTWT

---

Dataset #:	1
Motif ID:	2
Motif name:	Motif 2
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	7
Number of overlap:	8
Similarity score:	0.110577

Alignment:
AWAAAWTWAAASWA
AAAGATTT------

Original motif     Consensus sequence: AWAAAWTWAAASWA	Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

---

Dataset #:	1
Motif ID:	8
Motif name:	Motif 8
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	3
Number of overlap:	8
Similarity score:	0.117187

Alignment:
AATHATATWTHAAA
--AAAGATTT----

Original motif     Consensus sequence: AATHATATWTHAAA	Reverse complement motif     Consensus sequence: TTTDAWATATHATT

---

Dataset #: 1

Motif ID: 13

Motif name: Motif 13

Original motif     Consensus sequence: AWAAATAA	Reverse complement motif     Consensus sequence: TTATTTWT

Best Matches for Motif ID 13 (Highest to Lowest)

Dataset #:	1
Motif ID:	16
Motif name:	Motif 16
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	1
Number of overlap:	8
Similarity score:	0.046875

Alignment:
AAAAATGAAT
AWAAATAA--

Original motif     Consensus sequence: AAAAATGAAT	Reverse complement motif     Consensus sequence: ATTCATTTTT

---

Dataset #:	1
Motif ID:	4
Motif name:	Motif 4
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	6
Number of overlap:	8
Similarity score:	0.046875

Alignment:
AAATTKTATTTAWT
-----TTATTTWT-

Original motif     Consensus sequence: AWTAAATAYAATTT	Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

---

Dataset #:	1
Motif ID:	14
Motif name:	Motif 14
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	3
Number of overlap:	8
Similarity score:	0.0625

Alignment:
ATMACAATAAAA
--AWAAATAA--

Original motif     Consensus sequence: ATMACAATAAAA	Reverse complement motif     Consensus sequence: TTTTATTGTYAT

---

Dataset #:	1
Motif ID:	15
Motif name:	Motif 15
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	7
Number of overlap:	8
Similarity score:	0.0625

Alignment:
TCAAAATKAWTTGT
------TTATTTWT

Original motif     Consensus sequence: ACAAWTRATTTTGA	Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT

---

Dataset #:	1
Motif ID:	7
Motif name:	Motif 7
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	7
Number of overlap:	8
Similarity score:	0.078125

Alignment:
TGATTTTAWKATTT
TTATTTWT------

Original motif     Consensus sequence: AAATRWTAAAATCA	Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

---

Dataset #:	1
Motif ID:	11
Motif name:	Motif 11
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	1
Number of overlap:	8
Similarity score:	0.078125

Alignment:
AAAACAAA
AWAAATAA

Original motif     Consensus sequence: AAAACAAA	Reverse complement motif     Consensus sequence: TTTGTTTT

---

Dataset #:	1
Motif ID:	17
Motif name:	Motif 17
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	4
Number of overlap:	8
Similarity score:	0.078125

Alignment:
TTAGWTWATAA
TTATTTWT---

Original motif     Consensus sequence: TTAGWTWATAA	Reverse complement motif     Consensus sequence: TTATWAWCTAA

---

Dataset #:	1
Motif ID:	2
Motif name:	Motif 2
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	1
Number of overlap:	8
Similarity score:	0.0829327

Alignment:
TWSTTTWAWTTTWT
------TTATTTWT

Original motif     Consensus sequence: AWAAAWTWAAASWA	Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

---

Dataset #:	1
Motif ID:	5
Motif name:	Motif 5
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	6
Number of overlap:	8
Similarity score:	0.0859375

Alignment:
AATTYDGAARTAWW
-----AWAAATAA-

Original motif     Consensus sequence: AATTYDGAARTAWW	Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

---

Dataset #:	1
Motif ID:	3
Motif name:	Motif 3
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	4
Number of overlap:	8
Similarity score:	0.0863487

Alignment:
AWGKAAWTTTT
---TTATTTWT

Original motif     Consensus sequence: AAAAWTTRCWT	Reverse complement motif     Consensus sequence: AWGKAAWTTTT

---

Dataset #: 1

Motif ID: 14

Motif name: Motif 14

Original motif     Consensus sequence: ATMACAATAAAA	Reverse complement motif     Consensus sequence: TTTTATTGTYAT

Best Matches for Motif ID 14 (Highest to Lowest)

Dataset #:	1
Motif ID:	7
Motif name:	Motif 7
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	3
Number of overlap:	12
Similarity score:	0.104167

Alignment:
TGATTTTAWKATTT
TTTTATTGTYAT--

Original motif     Consensus sequence: AAATRWTAAAATCA	Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

---

Dataset #:	1
Motif ID:	4
Motif name:	Motif 4
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	2
Number of overlap:	12
Similarity score:	0.114583

Alignment:
AWTAAATAYAATTT
-ATMACAATAAAA-

Original motif     Consensus sequence: AWTAAATAYAATTT	Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

---

Dataset #:	1
Motif ID:	2
Motif name:	Motif 2
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	1
Number of overlap:	12
Similarity score:	0.114583

Alignment:
AWAAAWTWAAASWA
ATMACAATAAAA--

Original motif     Consensus sequence: AWAAAWTWAAASWA	Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

---

Dataset #:	1
Motif ID:	5
Motif name:	Motif 5
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	3
Number of overlap:	12
Similarity score:	0.119792

Alignment:
AATTYDGAARTAWW
--ATMACAATAAAA

Original motif     Consensus sequence: AATTYDGAARTAWW	Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

---

Dataset #:	1
Motif ID:	8
Motif name:	Motif 8
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	2
Number of overlap:	12
Similarity score:	0.121528

Alignment:
TTTDAWATATHATT
-TTTTATTGTYAT-

Original motif     Consensus sequence: AATHATATWTHAAA	Reverse complement motif     Consensus sequence: TTTDAWATATHATT

---

Dataset #:	1
Motif ID:	15
Motif name:	Motif 15
Matching format of first motif:	Original Motif
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	4
Number of overlap:	11
Similarity score:	0.590909

Alignment:
-TCAAAATKAWTTGT
ATMACAATAAAA---

Original motif     Consensus sequence: ACAAWTRATTTTGA	Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT

---

Dataset #:	1
Motif ID:	10
Motif name:	Motif 10
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	1
Number of overlap:	11
Similarity score:	0.602273

Alignment:
-ATTTWATGAAA
TTTTATTGTYAT

Original motif     Consensus sequence: ATTTWATGAAA	Reverse complement motif     Consensus sequence: TTTCATWAAAT

---

Dataset #:	1
Motif ID:	18
Motif name:	Motif 18
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	3
Number of overlap:	11
Similarity score:	0.613636

Alignment:
TTCWTAGATTAWA-
--ATMACAATAAAA

Original motif     Consensus sequence: TTCWTAGATTAWA	Reverse complement motif     Consensus sequence: TWTAATCTAWGAA

---

Dataset #:	1
Motif ID:	17
Motif name:	Motif 17
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	1
Number of overlap:	11
Similarity score:	0.613636

Alignment:
-TTAGWTWATAA
ATMACAATAAAA

Original motif     Consensus sequence: TTAGWTWATAA	Reverse complement motif     Consensus sequence: TTATWAWCTAA

---

Dataset #:	1
Motif ID:	19
Motif name:	Motif 19
Matching format of first motif:	Original Motif
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	1
Number of overlap:	11
Similarity score:	0.625

Alignment:
AAATCTTTYAA-
ATMACAATAAAA

Original motif     Consensus sequence: TTMAAAGATTT	Reverse complement motif     Consensus sequence: AAATCTTTYAA

---

Dataset #: 1

Motif ID: 15

Motif name: Motif 15

Original motif     Consensus sequence: ACAAWTRATTTTGA	Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT

Best Matches for Motif ID 15 (Highest to Lowest)

Dataset #:	1
Motif ID:	4
Motif name:	Motif 4
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	1
Number of overlap:	14
Similarity score:	0.1

Alignment:
AWTAAATAYAATTT
TCAAAATKAWTTGT

Original motif     Consensus sequence: AWTAAATAYAATTT	Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

---

Dataset #:	1
Motif ID:	8
Motif name:	Motif 8
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	3
Number of overlap:	12
Similarity score:	1.08264

Alignment:
TTTDAWATATHATT--
--TCAAAATKAWTTGT

Original motif     Consensus sequence: AATHATATWTHAAA	Reverse complement motif     Consensus sequence: TTTDAWATATHATT

---

Dataset #:	1
Motif ID:	7
Motif name:	Motif 7
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	3
Number of overlap:	12
Similarity score:	1.1

Alignment:
--AAATRWTAAAATCA
ACAAWTRATTTTGA--

Original motif     Consensus sequence: AAATRWTAAAATCA	Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

---

Dataset #:	1
Motif ID:	14
Motif name:	Motif 14
Matching format of first motif:	Original Motif
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	2
Number of overlap:	11
Similarity score:	1.56591

Alignment:
TTTTATTGTYAT---
-ACAAWTRATTTTGA

Original motif     Consensus sequence: ATMACAATAAAA	Reverse complement motif     Consensus sequence: TTTTATTGTYAT

---

Dataset #:	1
Motif ID:	5
Motif name:	Motif 5
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	4
Number of overlap:	11
Similarity score:	1.56875

Alignment:
---AATTYDGAARTAWW
TCAAAATKAWTTGT---

Original motif     Consensus sequence: AATTYDGAARTAWW	Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

---

Dataset #:	1
Motif ID:	3
Motif name:	Motif 3
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	1
Number of overlap:	11
Similarity score:	1.57667

Alignment:
AAAAWTTRCWT---
ACAAWTRATTTTGA

Original motif     Consensus sequence: AAAAWTTRCWT	Reverse complement motif     Consensus sequence: AWGKAAWTTTT

---

Dataset #:	1
Motif ID:	19
Motif name:	Motif 19
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	1
Number of overlap:	11
Similarity score:	1.57727

Alignment:
TTMAAAGATTT---
ACAAWTRATTTTGA

Original motif     Consensus sequence: TTMAAAGATTT	Reverse complement motif     Consensus sequence: AAATCTTTYAA

---

Dataset #:	1
Motif ID:	2
Motif name:	Motif 2
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	4
Number of overlap:	11
Similarity score:	1.59738

Alignment:
TWSTTTWAWTTTWT---
---TCAAAATKAWTTGT

Original motif     Consensus sequence: AWAAAWTWAAASWA	Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

---

Dataset #:	1
Motif ID:	18
Motif name:	Motif 18
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	3
Number of overlap:	11
Similarity score:	1.6

Alignment:
TTCWTAGATTAWA---
--TCAAAATKAWTTGT

Original motif     Consensus sequence: TTCWTAGATTAWA	Reverse complement motif     Consensus sequence: TWTAATCTAWGAA

---

Dataset #:	1
Motif ID:	17
Motif name:	Motif 17
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	1
Number of overlap:	11
Similarity score:	1.6

Alignment:
TTAGWTWATAA---
ACAAWTRATTTTGA

Original motif     Consensus sequence: TTAGWTWATAA	Reverse complement motif     Consensus sequence: TTATWAWCTAA

---

Dataset #: 1

Motif ID: 16

Motif name: Motif 16

Original motif     Consensus sequence: AAAAATGAAT	Reverse complement motif     Consensus sequence: ATTCATTTTT

Best Matches for Motif ID 16 (Highest to Lowest)

Dataset #:	1
Motif ID:	15
Motif name:	Motif 15
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	4
Number of overlap:	10
Similarity score:	0.05

Alignment:
ACAAWTRATTTTGA
-ATTCATTTTT---

Original motif     Consensus sequence: ACAAWTRATTTTGA	Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT

---

Dataset #:	1
Motif ID:	9
Motif name:	Motif 9
Matching format of first motif:	Original Motif
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	1
Number of overlap:	10
Similarity score:	0.0875

Alignment:
AWTTATGAAA
AAAAATGAAT

Original motif     Consensus sequence: TTTCATAAWT	Reverse complement motif     Consensus sequence: AWTTATGAAA

---

Dataset #:	1
Motif ID:	4
Motif name:	Motif 4
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	2
Number of overlap:	10
Similarity score:	0.0875

Alignment:
AWTAAATAYAATTT
---AAAAATGAAT-

Original motif     Consensus sequence: AWTAAATAYAATTT	Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

---

Dataset #:	1
Motif ID:	14
Motif name:	Motif 14
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	1
Number of overlap:	10
Similarity score:	0.0875

Alignment:
ATMACAATAAAA
--AAAAATGAAT

Original motif     Consensus sequence: ATMACAATAAAA	Reverse complement motif     Consensus sequence: TTTTATTGTYAT

---

Dataset #:	1
Motif ID:	3
Motif name:	Motif 3
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	1
Number of overlap:	10
Similarity score:	0.0947369

Alignment:
AWGKAAWTTTT
-ATTCATTTTT

Original motif     Consensus sequence: AAAAWTTRCWT	Reverse complement motif     Consensus sequence: AWGKAAWTTTT

---

Dataset #:	1
Motif ID:	7
Motif name:	Motif 7
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	1
Number of overlap:	10
Similarity score:	0.1

Alignment:
TGATTTTAWKATTT
----ATTCATTTTT

Original motif     Consensus sequence: AAATRWTAAAATCA	Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

---

Dataset #:	1
Motif ID:	2
Motif name:	Motif 2
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	1
Number of overlap:	10
Similarity score:	0.104808

Alignment:
TWSTTTWAWTTTWT
----ATTCATTTTT

Original motif     Consensus sequence: AWAAAWTWAAASWA	Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

---

Dataset #:	1
Motif ID:	8
Motif name:	Motif 8
Matching format of first motif:	Original Motif
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	1
Number of overlap:	10
Similarity score:	0.10625

Alignment:
TTTDAWATATHATT
AAAAATGAAT----

Original motif     Consensus sequence: AATHATATWTHAAA	Reverse complement motif     Consensus sequence: TTTDAWATATHATT

---

Dataset #:	1
Motif ID:	19
Motif name:	Motif 19
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	2
Number of overlap:	10
Similarity score:	0.1125

Alignment:
AAATCTTTYAA
-ATTCATTTTT

Original motif     Consensus sequence: TTMAAAGATTT	Reverse complement motif     Consensus sequence: AAATCTTTYAA

---

Dataset #:	1
Motif ID:	10
Motif name:	Motif 10
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	2
Number of overlap:	10
Similarity score:	0.1125

Alignment:
ATTTWATGAAA
-AAAAATGAAT

Original motif     Consensus sequence: ATTTWATGAAA	Reverse complement motif     Consensus sequence: TTTCATWAAAT

---

Dataset #: 1

Motif ID: 17

Motif name: Motif 17

Original motif     Consensus sequence: TTAGWTWATAA	Reverse complement motif     Consensus sequence: TTATWAWCTAA

Best Matches for Motif ID 17 (Highest to Lowest)

Dataset #:	1
Motif ID:	5
Motif name:	Motif 5
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	3
Number of overlap:	11
Similarity score:	0.09375

Alignment:
AATTYDGAARTAWW
-TTATWAWCTAA--

Original motif     Consensus sequence: AATTYDGAARTAWW	Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

---

Dataset #:	1
Motif ID:	10
Motif name:	Motif 10
Matching format of first motif:	Original Motif
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	1
Number of overlap:	11
Similarity score:	0.102273

Alignment:
TTTCATWAAAT
TTAGWTWATAA

Original motif     Consensus sequence: ATTTWATGAAA	Reverse complement motif     Consensus sequence: TTTCATWAAAT

---

Dataset #:	1
Motif ID:	7
Motif name:	Motif 7
Matching format of first motif:	Original Motif
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	1
Number of overlap:	11
Similarity score:	0.102273

Alignment:
TGATTTTAWKATTT
---TTAGWTWATAA

Original motif     Consensus sequence: AAATRWTAAAATCA	Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

---

Dataset #:	1
Motif ID:	8
Motif name:	Motif 8
Matching format of first motif:	Original Motif
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	2
Number of overlap:	11
Similarity score:	0.109848

Alignment:
TTTDAWATATHATT
-TTAGWTWATAA--

Original motif     Consensus sequence: AATHATATWTHAAA	Reverse complement motif     Consensus sequence: TTTDAWATATHATT

---

Dataset #:	1
Motif ID:	18
Motif name:	Motif 18
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	3
Number of overlap:	11
Similarity score:	0.113636

Alignment:
TTCWTAGATTAWA
TTATWAWCTAA--

Original motif     Consensus sequence: TTCWTAGATTAWA	Reverse complement motif     Consensus sequence: TWTAATCTAWGAA

---

Dataset #:	1
Motif ID:	14
Motif name:	Motif 14
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	2
Number of overlap:	11
Similarity score:	0.113636

Alignment:
ATMACAATAAAA
TTATWAWCTAA-

Original motif     Consensus sequence: ATMACAATAAAA	Reverse complement motif     Consensus sequence: TTTTATTGTYAT

---

Dataset #:	1
Motif ID:	4
Motif name:	Motif 4
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	2
Number of overlap:	11
Similarity score:	0.113636

Alignment:
AAATTKTATTTAWT
--TTATWAWCTAA-

Original motif     Consensus sequence: AWTAAATAYAATTT	Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

---

Dataset #:	1
Motif ID:	2
Motif name:	Motif 2
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	3
Number of overlap:	11
Similarity score:	0.118881

Alignment:
AWAAAWTWAAASWA
-TTAGWTWATAA--

Original motif     Consensus sequence: AWAAAWTWAAASWA	Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

---

Dataset #:	1
Motif ID:	15
Motif name:	Motif 15
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	1
Number of overlap:	11
Similarity score:	0.125

Alignment:
ACAAWTRATTTTGA
TTAGWTWATAA---

Original motif     Consensus sequence: ACAAWTRATTTTGA	Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT

---

Dataset #:	1
Motif ID:	9
Motif name:	Motif 9
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	1
Number of overlap:	10
Similarity score:	0.6125

Alignment:
-AWTTATGAAA
TTATWAWCTAA

Original motif     Consensus sequence: TTTCATAAWT	Reverse complement motif     Consensus sequence: AWTTATGAAA

---

Dataset #: 1

Motif ID: 18

Motif name: Motif 18

Original motif     Consensus sequence: TTCWTAGATTAWA	Reverse complement motif     Consensus sequence: TWTAATCTAWGAA

Best Matches for Motif ID 18 (Highest to Lowest)

Dataset #:	1
Motif ID:	8
Motif name:	Motif 8
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	2
Number of overlap:	13
Similarity score:	0.0641025

Alignment:
AATHATATWTHAAA
-TTCWTAGATTAWA

Original motif     Consensus sequence: AATHATATWTHAAA	Reverse complement motif     Consensus sequence: TTTDAWATATHATT

---

Dataset #:	1
Motif ID:	5
Motif name:	Motif 5
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	3
Number of overlap:	12
Similarity score:	0.5625

Alignment:
AATTYDGAARTAWW-
--TTCWTAGATTAWA

Original motif     Consensus sequence: AATTYDGAARTAWW	Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

---

Dataset #:	1
Motif ID:	7
Motif name:	Motif 7
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	3
Number of overlap:	12
Similarity score:	0.5625

Alignment:
-TGATTTTAWKATTT
TWTAATCTAWGAA--

Original motif     Consensus sequence: AAATRWTAAAATCA	Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

---

Dataset #:	1
Motif ID:	4
Motif name:	Motif 4
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	3
Number of overlap:	12
Similarity score:	0.583333

Alignment:
AWTAAATAYAATTT-
--TTCWTAGATTAWA

Original motif     Consensus sequence: AWTAAATAYAATTT	Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

---

Dataset #:	1
Motif ID:	19
Motif name:	Motif 19
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	1
Number of overlap:	11
Similarity score:	1.02652

Alignment:
TTMAAAGATTT--
TTCWTAGATTAWA

Original motif     Consensus sequence: TTMAAAGATTT	Reverse complement motif     Consensus sequence: AAATCTTTYAA

---

Dataset #:	1
Motif ID:	17
Motif name:	Motif 17
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	1
Number of overlap:	11
Similarity score:	1.07197

Alignment:
TTAGWTWATAA--
TWTAATCTAWGAA

Original motif     Consensus sequence: TTAGWTWATAA	Reverse complement motif     Consensus sequence: TTATWAWCTAA

---

Dataset #:	1
Motif ID:	14
Motif name:	Motif 14
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	2
Number of overlap:	11
Similarity score:	1.07197

Alignment:
TTTTATTGTYAT--
-TWTAATCTAWGAA

Original motif     Consensus sequence: ATMACAATAAAA	Reverse complement motif     Consensus sequence: TTTTATTGTYAT

---

Dataset #:	1
Motif ID:	10
Motif name:	Motif 10
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	1
Number of overlap:	11
Similarity score:	1.07197

Alignment:
TTTCATWAAAT--
TWTAATCTAWGAA

Original motif     Consensus sequence: ATTTWATGAAA	Reverse complement motif     Consensus sequence: TTTCATWAAAT

---

Dataset #:	1
Motif ID:	15
Motif name:	Motif 15
Matching format of first motif:	Original Motif
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	4
Number of overlap:	11
Similarity score:	1.08333

Alignment:
TCAAAATKAWTTGT--
---TTCWTAGATTAWA

Original motif     Consensus sequence: ACAAWTRATTTTGA	Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT

---

Dataset #:	1
Motif ID:	2
Motif name:	Motif 2
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	5
Number of overlap:	10
Similarity score:	1.55833

Alignment:
---AWAAAWTWAAASWA
TTCWTAGATTAWA----

Original motif     Consensus sequence: AWAAAWTWAAASWA	Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

---

Dataset #: 1

Motif ID: 19

Motif name: Motif 19

Original motif     Consensus sequence: TTMAAAGATTT	Reverse complement motif     Consensus sequence: AAATCTTTYAA

Best Matches for Motif ID 19 (Highest to Lowest)

Dataset #:	1
Motif ID:	18
Motif name:	Motif 18
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	3
Number of overlap:	11
Similarity score:	0.0681818

Alignment:
TTCWTAGATTAWA
TTMAAAGATTT--

Original motif     Consensus sequence: TTCWTAGATTAWA	Reverse complement motif     Consensus sequence: TWTAATCTAWGAA

---

Dataset #:	1
Motif ID:	7
Motif name:	Motif 7
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	4
Number of overlap:	11
Similarity score:	0.0681818

Alignment:
AAATRWTAAAATCA
---AAATCTTTYAA

Original motif     Consensus sequence: AAATRWTAAAATCA	Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

---

Dataset #:	1
Motif ID:	15
Motif name:	Motif 15
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	3
Number of overlap:	11
Similarity score:	0.102273

Alignment:
ACAAWTRATTTTGA
-AAATCTTTYAA--

Original motif     Consensus sequence: ACAAWTRATTTTGA	Reverse complement motif     Consensus sequence: TCAAAATKAWTTGT

---

Dataset #:	1
Motif ID:	4
Motif name:	Motif 4
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	3
Number of overlap:	11
Similarity score:	0.102273

Alignment:
AAATTKTATTTAWT
-AAATCTTTYAA--

Original motif     Consensus sequence: AWTAAATAYAATTT	Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

---

Dataset #:	1
Motif ID:	8
Motif name:	Motif 8
Matching format of first motif:	Original Motif
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	2
Number of overlap:	11
Similarity score:	0.106061

Alignment:
TTTDAWATATHATT
--TTMAAAGATTT-

Original motif     Consensus sequence: AATHATATWTHAAA	Reverse complement motif     Consensus sequence: TTTDAWATATHATT

---

Dataset #:	1
Motif ID:	3
Motif name:	Motif 3
Matching format of first motif:	Original Motif
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	1
Number of overlap:	11
Similarity score:	0.110646

Alignment:
AWGKAAWTTTT
TTMAAAGATTT

Original motif     Consensus sequence: AAAAWTTRCWT	Reverse complement motif     Consensus sequence: AWGKAAWTTTT

---

Dataset #:	1
Motif ID:	5
Motif name:	Motif 5
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	2
Number of overlap:	11
Similarity score:	0.125

Alignment:
WWTAKTTCDKAATT
-AAATCTTTYAA--

Original motif     Consensus sequence: AATTYDGAARTAWW	Reverse complement motif     Consensus sequence: WWTAKTTCDKAATT

---

Dataset #:	1
Motif ID:	14
Motif name:	Motif 14
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	2
Number of overlap:	11
Similarity score:	0.125

Alignment:
ATMACAATAAAA
-AAATCTTTYAA

Original motif     Consensus sequence: ATMACAATAAAA	Reverse complement motif     Consensus sequence: TTTTATTGTYAT

---

Dataset #:	1
Motif ID:	10
Motif name:	Motif 10
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	2
Number of overlap:	10
Similarity score:	0.6

Alignment:
ATTTWATGAAA-
-AAATCTTTYAA

Original motif     Consensus sequence: ATTTWATGAAA	Reverse complement motif     Consensus sequence: TTTCATWAAAT

---

Dataset #:	1
Motif ID:	16
Motif name:	Motif 16
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	1
Number of overlap:	10
Similarity score:	0.6125

Alignment:
-ATTCATTTTT
AAATCTTTYAA

Original motif     Consensus sequence: AAAAATGAAT	Reverse complement motif     Consensus sequence: ATTCATTTTT

---

Dataset #: 1

Motif ID: 20

Motif name: Motif 20

Original motif     Consensus sequence: ATAAAA	Reverse complement motif     Consensus sequence: TTTTAT

Best Matches for Motif ID 20 (Highest to Lowest)

Dataset #:	1
Motif ID:	14
Motif name:	Motif 14
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	7
Number of overlap:	6
Similarity score:	0

Alignment:
TTTTATTGTYAT
TTTTAT------

Original motif     Consensus sequence: ATMACAATAAAA	Reverse complement motif     Consensus sequence: TTTTATTGTYAT

---

Dataset #:	1
Motif ID:	4
Motif name:	Motif 4
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	6
Number of overlap:	6
Similarity score:	0.0208333

Alignment:
AAATTKTATTTAWT
---TTTTAT-----

Original motif     Consensus sequence: AWTAAATAYAATTT	Reverse complement motif     Consensus sequence: AAATTKTATTTAWT

---

Dataset #:	1
Motif ID:	7
Motif name:	Motif 7
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	6
Number of overlap:	6
Similarity score:	0.0208333

Alignment:
TGATTTTAWKATTT
---TTTTAT-----

Original motif     Consensus sequence: AAATRWTAAAATCA	Reverse complement motif     Consensus sequence: TGATTTTAWKATTT

---

Dataset #:	1
Motif ID:	10
Motif name:	Motif 10
Matching format of first motif:	Original Motif
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	2
Number of overlap:	6
Similarity score:	0.0208333

Alignment:
TTTCATWAAAT
-ATAAAA----

Original motif     Consensus sequence: ATTTWATGAAA	Reverse complement motif     Consensus sequence: TTTCATWAAAT

---

Dataset #:	1
Motif ID:	9
Motif name:	Motif 9
Matching format of first motif:	Original Motif
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	5
Number of overlap:	6
Similarity score:	0.0416667

Alignment:
AWTTATGAAA
ATAAAA----

Original motif     Consensus sequence: TTTCATAAWT	Reverse complement motif     Consensus sequence: AWTTATGAAA

---

Dataset #:	1
Motif ID:	18
Motif name:	Motif 18
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	1
Number of overlap:	6
Similarity score:	0.0625

Alignment:
TTCWTAGATTAWA
-------ATAAAA

Original motif     Consensus sequence: TTCWTAGATTAWA	Reverse complement motif     Consensus sequence: TWTAATCTAWGAA

---

Dataset #:	1
Motif ID:	19
Motif name:	Motif 19
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	1
Number of overlap:	6
Similarity score:	0.0625

Alignment:
TTMAAAGATTT
ATAAAA-----

Original motif     Consensus sequence: TTMAAAGATTT	Reverse complement motif     Consensus sequence: AAATCTTTYAA

---

Dataset #:	1
Motif ID:	13
Motif name:	Motif 13
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Backward
Position number:	3
Number of overlap:	6
Similarity score:	0.0625

Alignment:
AWAAATAA
ATAAAA--

Original motif     Consensus sequence: AWAAATAA	Reverse complement motif     Consensus sequence: TTATTTWT

---

Dataset #:	1
Motif ID:	2
Motif name:	Motif 2
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Forward
Position number:	4
Number of overlap:	6
Similarity score:	0.0689103

Alignment:
TWSTTTWAWTTTWT
---TTTTAT-----

Original motif     Consensus sequence: AWAAAWTWAAASWA	Reverse complement motif     Consensus sequence: TWSTTTWAWTTTWT

---

Dataset #:	1
Motif ID:	8
Motif name:	Motif 8
Matching format of first motif:	Reverse Complement
Matching format of second motif:	Reverse Complement
Direction:	Backward
Position number:	9
Number of overlap:	6
Similarity score:	0.0729167

Alignment:
TTTDAWATATHATT
TTTTAT--------

Original motif     Consensus sequence: AATHATATWTHAAA	Reverse complement motif     Consensus sequence: TTTDAWATATHATT

---