**************************************************************************************************************************************************************************************************** MOTIFSIM - Motif Similarity Detection Tool Version 2.2 **************************************************************************************************************************************************************************************************** INPUT **************************************************************************************************************************************************************************************************** Input Parameters Number of files: 1 Number of top significant motifs: 50 Number of best matches: 50 Similarity cutoff: >= 0.5 Matching motif database: None Motif tree: Yes Combined similar motifs: Yes Output file type: All Output file format: All Input files and motif counts File name Count of motifs Dataset # U20230326-stremeR.txt 365 1 **************************************************************************************************************************************************************************************************** RESULTS **************************************************************************************************************************************************************************************************** ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 318 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 318 Motif 88 Reverse Complement Original Motif CGGGGCTG ACCGGGGCTGCA CACGGGGCTGAC Direction: Backward Position #: 3 Overlap #: 8 Alignment: --CGGGGCTG-- ACCGGGGCTGCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 183 Original Motif Reverse Complement CACGGGGCTGAC GGCCMGCAGGGCKGGC GGCCMSMMGGGSYKGMC Direction: Forward Position #: 6 Overlap #: 11 Alignment: -----CACGGGGCTGAC GGCCMGCAGGGCKGGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 78 Combined Motif Original Motif Original Motif GGCCMSMMGGGSYKGMC CGAGCCCTGCCCCGCGG GGCCMSCVRGSCCTGCCCCGCGG Direction: Forward Position #: 7 Overlap #: 11 Alignment: GGCCMSMMGGGSYKGMC------ ------CGAGCCCTGCCCCGCGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 92 Combined Motif Reverse Complement Original Motif CCGCGGGGCAGGSCKVGSYGGCC GGGGGCTGACCCCCCCACC CCGCGGGGCRGGGSYTGVCSSCCCCACC Direction: Forward Position #: 10 Overlap #: 14 Alignment: CCGCGGGGCAGGSCKVGSYGGCC----- ---------GGGGGCTGACCCCCCCACC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 122 Combined Motif Original Motif Original Motif CCGCGGGGCRGGGSYTGVCSSCCCCACC CCTTGGCCAGCCCAGAAAG CCGCGGGGCRGGSCTTGGCCMSCCCASMAAG Direction: Forward Position #: 13 Overlap #: 16 Alignment: CCGCGGGGCRGGGSYTGVCSSCCCCACC--- ------------CCTTGGCCAGCCCAGAAAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 155 Combined Motif Original Motif Reverse Complement CCGCGGGGCRGGSCTTGGCCMSCCCASMAAG GCCKCCCCGTCCGGGAGGGA CCGCGGGGCRGGSSYYGSCCMGYCCRGSARGGA Direction: Forward Position #: 14 Overlap #: 18 Alignment: CCGCGGGGCRGGSCTTGGCCMSCCCASMAAG-- -------------GCCKCCCCGTCCGGGAGGGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 128 Combined Motif Original Motif Reverse Complement CCGCGGGGCRGGSSYYGSCCMGYCCRGSARGGA CMGCTCCGAGTGCGG CCGCGGGGCRGGSSCCGCYCCGASYGSGRRGGA Direction: Forward Position #: 15 Overlap #: 15 Alignment: CCGCGGGGCRGGSSYYGSCCMGYCCRGSARGGA --------------CMGCTCCGAGTGCGG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 65 Combined Motif Original Motif Reverse Complement CCGCGGGGCRGGSSCCGCYCCGASYGSGRRGGA CGGCGCTGMGCTCGATTTCT CCGCGGGGCRGGSSCBGCKCYGMGCKCGADKKMT Direction: Forward Position #: 15 Overlap #: 19 Alignment: CCGCGGGGCRGGSSCCGCYCCGASYGSGRRGGA- --------------CGGCGCTGMGCTCGATTTCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 42 Combined Motif Original Motif Reverse Complement CCGCGGGGCRGGSSCBGCKCYGMGCKCGADKKMT GCGGCCGGGCAGAG CCGCGGSSSGGSMGMGGCKCYGMGCKCGADKKMT Direction: Forward Position #: 3 Overlap #: 14 Alignment: CCGCGGGGCRGGSSCBGCKCYGMGCKCGADKKMT --GCGGCCGGGCAGAG------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 62 Combined Motif Original Motif Reverse Complement CCGCGGSSSGGSMGMGGCKCYGMGCKCGADKKMT GTAGACKGGAGCTGTTCCT CCGCGGSSSGGSMGMGKMGMCKVGMGCKRTTYCT Direction: Forward Position #: 16 Overlap #: 19 Alignment: CCGCGGSSSGGSMGMGGCKCYGMGCKCGADKKMT ---------------GTAGACKGGAGCTGTTCCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 157 Combined Motif Reverse Complement Reverse Complement AGKAAMRGCYCVYGYCYRCYCYSCCSSSCCGCGG CCGCGCCGTGCGC AGKAAMRGCCSCSSCSTGCKCYSCCSSSCCGCGG Direction: Forward Position #: 9 Overlap #: 13 Alignment: AGKAAMRGCYCVYGYCYRCYCYSCCSSSCCGCGG --------CCGCGCCGTGCGC------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 36 Combined Motif Original Motif Original Motif AGKAAMRGCCSCSSCSTGCKCYSCCSSSCCGCGG ACATCCCAGACGATGGGCG AGKAAMRGCCSCSSCVYRYCCCRSMCGRYSGSSG Direction: Forward Position #: 16 Overlap #: 19 Alignment: AGKAAMRGCCSCSSCSTGCKCYSCCSSSCCGCGG ---------------ACATCCCAGACGATGGGCG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 263 Combined Motif Reverse Complement Original Motif CSSCSKKCGYSKGGGMKKBGSSGSGGCKRTTYCT CCCAGCTCTGCC CSSCSKKCGYSKGGGCYSWGCYSBGSCKRTTYCT Direction: Forward Position #: 16 Overlap #: 12 Alignment: CSSCSKKCGYSKGGGMKKBGSSGSGGCKRTTYCT ---------------CCCAGCTCTGCC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 136 Combined Motif Original Motif Reverse Complement CSSCSKKCGYSKGGGCYSWGCYSBGSCKRTTYCT CCCCGGGCAGTGAGGG CSSCSKKCGYSKGGGCCCMGSGCAGTSWGKKYCT Direction: Forward Position #: 16 Overlap #: 16 Alignment: CSSCSKKCGYSKGGGCYSWGCYSBGSCKRTTYCT ---------------CCCCGGGCAGTGAGGG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 59 Combined Motif Reverse Complement Reverse Complement AGKYYCWSACTGCSCRGGGCCCRSMCGRYSGSSG CKCGTCSGGGAGG AGKYYCWSACTGCSCCKSGYCCGGRMGGYSGSSG Direction: Forward Position #: 16 Overlap #: 13 Alignment: AGKYYCWSACTGCSCRGGGCCCRSMCGRYSGSSG ---------------CKCGTCSGGGAGG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 52 Combined Motif Reverse Complement Reverse Complement CSSCSKCCYMCCGGMCSYGGSGCAGTSWGKKYCT GGTGGAGCTGCCTGCCAGTC CSSCSKCCYMCCGGMSGTGGRGCTGCCTGSSMSTC Direction: Forward Position #: 16 Overlap #: 19 Alignment: CSSCSKCCYMCCGGMCSYGGSGCAGTSWGKKYCT- ---------------GGTGGAGCTGCCTGCCAGTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 100 Combined Motif Original Motif Reverse Complement CSSCSKCCYMCCGGMSGTGGRGCTGCCTGSSMSTC CGCGGCGCTTGCGGGCCAGC CSSCSKCCYMCCGGMCGYGGMGCTKSCKGGCCAKC Direction: Forward Position #: 16 Overlap #: 20 Alignment: CSSCSKCCYMCCGGMSGTGGRGCTGCCTGSSMSTC ---------------CGCGGCGCTTGCGGGCCAGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 67 Combined Motif Reverse Complement Original Motif GRTGGCCYGSRAGCRCCKCGYCCGGRMGGYSGSSG CTGGGCTCCTGAGTCTGGTG GRTGGCCYGSRAGCRCYGSGCYCSKGAGKCKGGTG Direction: Forward Position #: 16 Overlap #: 20 Alignment: GRTGGCCYGSRAGCRCCKCGYCCGGRMGGYSGSSG ---------------CTGGGCTCCTGAGTCTGGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 320 Combined Motif Original Motif Reverse Complement GRTGGCCYGSRAGCRCYGSGCYCSKGAGKCKGGTG TGGGGCTCCAGATG GRTGGCCYGSRAGCRYKGGGCTCCAGAKGCKGGTG Direction: Forward Position #: 16 Overlap #: 14 Alignment: GRTGGCCYGSRAGCRCYGSGCYCSKGAGKCKGGTG ---------------TGGGGCTCCAGATG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 68 Combined Motif Reverse Complement Reverse Complement CACCRGCRTCTGGAGCCCYKMGCTKSCKGGCCAKC GACCTGCAGCCCGCCATG CACCRGCRTCTGGAGSMCCTGSMKBCCGSSMYGKC Direction: Forward Position #: 16 Overlap #: 18 Alignment: CACCRGCRTCTGGAGCCCYKMGCTKSCKGGCCAKC ---------------GACCTGCAGCCCGCCATG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 149 Combined Motif Reverse Complement Reverse Complement GRCMYSSCGGBYYSCAGGYSCTCCAGAKGCKGGTG GGGTGCAGGMGGGCTGAGT GRCMYSSCGGBYYSCRGGTGCWSSMGRGSYGRGTG Direction: Forward Position #: 16 Overlap #: 19 Alignment: GRCMYSSCGGBYYSCAGGYSCTCCAGAKGCKGGTG ---------------GGGTGCAGGMGGGCTGAGT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 39 Combined Motif Original Motif Original Motif GRCMYSSCGGBYYSCRGGTGCWSSMGRGSYGRGTG AGGCGGCTGGGAGG GRCMYSSCGGBYYSCAGGYGSCBGVGAGGYGRGTG Direction: Forward Position #: 16 Overlap #: 14 Alignment: GRCMYSSCGGBYYSCRGGTGCWSSMGRGSYGRGTG ---------------AGGCGGCTGGGAGG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 5 Combined Motif Reverse Complement Original Motif CACKCMCCTCVCVGSCKCCTGSMKBCCGSSMYGKC CCTCRGCCTCC CACKCMCCTCVCVGSCSYCDGCCTCCCGSSMYGKC Direction: Forward Position #: 16 Overlap #: 11 Alignment: CACKCMCCTCVCVGSCKCCTGSMKBCCGSSMYGKC ---------------CCTCRGCCTCC--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 286 Combined Motif Original Motif Reverse Complement CACKCMCCTCVCVGSCSYCDGCCTCCCGSSMYGKC CTCCCAGCCGCCTG CACKCMCCTCVCVGSCTCCCRSCYSCCKGSMYGKC Direction: Forward Position #: 16 Overlap #: 14 Alignment: CACKCMCCTCVCVGSCSYCDGCCTCCCGSSMYGKC ---------------CTCCCAGCCGCCTG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 30 Combined Motif Reverse Complement Original Motif GRCMYSCRGGSKGSKGGGAGSCBGVGAGGYGRGTG AGGAGCGCCTCTKCCCGGC GRCMYSCRGGSKGSKRGGAGCVCSTSWKSCSRGYG Direction: Forward Position #: 16 Overlap #: 19 Alignment: GRCMYSCRGGSKGSKGGGAGSCBGVGAGGYGRGTG ---------------AGGAGCGCCTCTKCCCGGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 82 Combined Motif Original Motif Reverse Complement GRCMYSCRGGSKGSKRGGAGCVCSTSWKSCSRGYG GCTGGCCCKGGTGCTAAGC GRCMYSCRGGSKGSKGSKRGCCCSGGTGCYMAGCG Direction: Forward Position #: 16 Overlap #: 19 Alignment: GRCMYSCRGGSKGSKRGGAGCVCSTSWKSCSRGYG ---------------GCTGGCCCKGGTGCTAAGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 170 Combined Motif Reverse Complement Original Motif CGCTYMGCACCSGGGCMRSCRSCYSCCKGSMYGKC AATCAACCCTGGYRATCAAT CGCTYMGCACCSGGGMAWCAACCCKSSYGMTCRDY Direction: Forward Position #: 16 Overlap #: 20 Alignment: CGCTYMGCACCSGGGCMRSCRSCYSCCKGSMYGKC ---------------AATCAACCCTGGYRATCAAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 108 Combined Motif Original Motif Original Motif CGCTYMGCACCSGGGMAWCAACCCKSSYGMTCRDY CGAGCCTCCCCGAYGAGCGC CGCTYMGCACCSGGGCRASMMYCCYCGASRASMRC Direction: Forward Position #: 16 Overlap #: 20 Alignment: CGCTYMGCACCSGGGMAWCAACCCKSSYGMTCRDY ---------------CGAGCCTCCCCGAYGAGCGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 125 Combined Motif Original Motif Original Motif CGCTYMGCACCSGGGCRASMMYCCYCGASRASMRC CGCCCGGCCAGCCGC CGCTYMGCACCSGGGCGMCCGGCCMGCCGCASMRC Direction: Forward Position #: 16 Overlap #: 15 Alignment: CGCTYMGCACCSGGGCRASMMYCCYCGASRASMRC ---------------CGCCCGGCCAGCCGC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 309 Combined Motif Original Motif Original Motif CGCTYMGCACCSGGGCGMCCGGCCMGCCGCASMRC CATTCTGGGGTCTGGAGGAY CGCTYMGCACCSGGGCRTYCKGSSRKCYGGAGGAY Direction: Forward Position #: 16 Overlap #: 20 Alignment: CGCTYMGCACCSGGGCGMCCGGCCMGCCGCASMRC ---------------CATTCTGGGGTCTGGAGGAY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 209 Combined Motif Original Motif Original Motif CGCTYMGCACCSGGGCRTYCKGSSRKCYGGAGGAY CTGTCAGCCCAT CGCTYMGCACCSGGGCWKTCAGCCCWYYGGAGGAY Direction: Forward Position #: 16 Overlap #: 12 Alignment: CGCTYMGCACCSGGGCRTYCKGSSRKCYGGAGGAY ---------------CTGTCAGCCCAT-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 10 Combined Motif Reverse Complement Original Motif KTCCTCCMMWGGGCTGAYWGCCCSGGTGCYMAGCG AGGASCSTCYSWGCCMGGY KTCCTCCMMWGGGCTRRGASCCYCBSWGCCMRGYG Direction: Forward Position #: 16 Overlap #: 19 Alignment: KTCCTCCMMWGGGCTGAYWGCCCSGGTGCYMAGCG ---------------AGGASCSTCYSWGCCMGGY- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 46 Combined Motif Reverse Complement Original Motif CKCMYGGCWSVGMGGSTCMKAGCCCWYYGGAGGAY CCCCWCCCCCA CKCMYGGCWSVGMGGCYCCKVSCCCAYYGGAGGAY Direction: Forward Position #: 16 Overlap #: 11 Alignment: CKCMYGGCWSVGMGGSTCMKAGCCCWYYGGAGGAY ---------------CCCCWCCCCCA--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 12 Combined Motif Reverse Complement Reverse Complement KTCCTCCMMTGGGSBRGGKGCCYCBSWGCCMRGYG GTTGGCCAGGCTGGTCT KTCCTCCMMTGGGSBGKKGGCCWSGSTGSYCKGYG Direction: Forward Position #: 16 Overlap #: 17 Alignment: KTCCTCCMMTGGGSBRGGKGCCYCBSWGCCMRGYG ---------------GTTGGCCAGGCTGGTCT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 101 Combined Motif Original Motif Reverse Complement KTCCTCCMMTGGGSBGKKGGCCWSGSTGSYCKGYG GCGGCGGCGGCG KTCCTCCMMTGGGSBGBGGSSSCGGCKGSYCKGYG Direction: Forward Position #: 16 Overlap #: 12 Alignment: KTCCTCCMMTGGGSBGKKGGCCWSGSTGSYCKGYG ---------------GCGGCGGCGGCG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 64 Combined Motif Reverse Complement Reverse Complement CKCRGMSCYGCCGSSSCCBCVSCCCAYYGGAGGAY KCCGGGCCTTAGCTGCCTTC CKCRGMSCYGCCGSSGCCGSGCCYYAGCKGMSKWC Direction: Forward Position #: 16 Overlap #: 20 Alignment: CKCRGMSCYGCCGSSSCCBCVSCCCAYYGGAGGAY ---------------KCCGGGCCTTAGCTGCCTTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 43 Combined Motif Reverse Complement Reverse Complement GWRSRCRGCTMMGGCSCGGCSSCGGCKGSYCKGYG AGGAGRCMCTCTGCCTGGC GWRSRCRGCTMMGGCASGRSVSCSKCKGCCYGGCG Direction: Forward Position #: 16 Overlap #: 19 Alignment: GWRSRCRGCTMMGGCSCGGCSSCGGCKGSYCKGYG ---------------AGGAGRCMCTCTGCCTGGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 26 Combined Motif Reverse Complement Original Motif CGCCMGGCRGRSGSVSKCSTGCCYYAGCKGMSKWC CTCCTGCCTCAGCCTCCCRA CGCCMGGCRGRSGSVCTCCTGCCTCAGCYKCCYDM Direction: Forward Position #: 16 Overlap #: 20 Alignment: CGCCMGGCRGRSGSVSKCSTGCCYYAGCKGMSKWC ---------------CTCCTGCCTCAGCCTCCCRA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 156 Combined Motif Original Motif Original Motif CGCCMGGCRGRSGSVCTCCTGCCTCAGCYKCCYDM CACTTCCCAGAC CGCCMGGCRGRSGSVCWCYTSCCWSASCYKCCYDM Direction: Forward Position #: 16 Overlap #: 12 Alignment: CGCCMGGCRGRSGSVCTCCTGCCTCAGCYKCCYDM ---------------CACTTCCCAGAC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 95 Combined Motif Original Motif Reverse Complement CGCCMGGCRGRSGSVCWCYTSCCWSASCYKCCYDM CACCTCCCAGACMGGGT CGCCMGGCRGRSGSVCACYTCCCAGACCGGSYYDM Direction: Forward Position #: 16 Overlap #: 17 Alignment: CGCCMGGCRGRSGSVCWCYTSCCWSASCYKCCYDM ---------------CACCTCCCAGACMGGGT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 321 Combined Motif Original Motif Original Motif CGCCMGGCRGRSGSVCACYTCCCAGACCGGSYYDM AAGCTCGAACTGGGTGGAGC CGCCMGGCRGRSGSVMASCTCSMASWSSGKGGHGC Direction: Forward Position #: 16 Overlap #: 20 Alignment: CGCCMGGCRGRSGSVCACYTCCCAGACCGGSYYDM ---------------AAGCTCGAACTGGGTGGAGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 167 Combined Motif Original Motif Original Motif CGCCMGGCRGRSGSVMASCTCSMASWSSGKGGHGC CCGCTCCTGTGC CGCCMGGCRGRSGSVCMGCTCCWRYGSSGKGGHGC Direction: Forward Position #: 16 Overlap #: 12 Alignment: CGCCMGGCRGRSGSVMASCTCSMASWSSGKGGHGC ---------------CCGCTCCTGTGC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 177 Combined Motif Reverse Complement Reverse Complement GCHCCRCSSCMMWGGAGCRGVSCSKCKGCCYGGCG ACCGAGMKMGCAGCTTCGGG GCHCCRCSSCMMWGGASCGRGCBCKCWGCYTVGSG Direction: Forward Position #: 16 Overlap #: 20 Alignment: GCHCCRCSSCMMWGGAGCRGVSCSKCKGCCYGGCG ---------------ACCGAGMKMGCAGCTTCGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 98 Combined Motif Original Motif Original Motif GCHCCRCSSCMMWGGASCGRGCBCKCWGCYTVGSG AGTTCCGGGTGGGCGTGGG GCHCCRCSSCMMWGGAGYTMSSGGTSGGCKTGGGG Direction: Forward Position #: 16 Overlap #: 19 Alignment: GCHCCRCSSCMMWGGASCGRGCBCKCWGCYTVGSG ---------------AGTTCCGGGTGGGCGTGGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 111 Combined Motif Original Motif Original Motif GCHCCRCSSCMMWGGAGYTMSSGGTSGGCKTGGGG AGGAGCCCCTCHGCCCR GCHCCRCSSCMMWGGAGGWGCSSSTCVGCCYRGGG Direction: Forward Position #: 16 Overlap #: 17 Alignment: GCHCCRCSSCMMWGGAGYTMSSGGTSGGCKTGGGG ---------------AGGAGCCCCTCHGCCCR--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 75 Combined Motif Reverse Complement Reverse Complement CCCMKGGCVGASSSGCWCCTCCWRYGSSGKGGHGC RRCCGCTCCATG CCCMKGGCVGASSSGVDCCKCYCSHTGSGKGGHGC Direction: Forward Position #: 16 Overlap #: 12 Alignment: CCCMKGGCVGASSSGCWCCTCCWRYGSSGKGGHGC ---------------RRCCGCTCCATG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 197 Combined Motif Original Motif Original Motif CCCMKGGCVGASSSGVDCCKCYCSHTGSGKGGHGC CGCCCGGCCAGC CCCMKGGCVGASSSGCGCCBSGCCAKSSGKGGHGC Direction: Forward Position #: 16 Overlap #: 12 Alignment: CCCMKGGCVGASSSGVDCCKCYCSHTGSGKGGHGC ---------------CGCCCGGCCAGC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 96 Combined Motif Reverse Complement Reverse Complement GCHCCRCSSYTGGCSBGGCGCSSSTCVGCCYRGGG GGAGCCGGCTCCCTCAGCTT GCHCCRCSSYTGGCSGGRSSCSGCTCCSYCHGSKK Direction: Forward Position #: 16 Overlap #: 20 Alignment: GCHCCRCSSYTGGCSBGGCGCSSSTCVGCCYRGGG ---------------GGAGCCGGCTCCCTCAGCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 13 Combined Motif Original Motif Reverse Complement GCHCCRCSSYTGGCSGGRSSCSGCTCCSYCHGSKK GGCAATGCCTCGCCCTGCTT GCHCCRCSSYTGGCSGGMVMYGCCTCSCCCTGCTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: GCHCCRCSSYTGGCSGGRSSCSGCTCCSYCHGSKK ---------------GGCAATGCCTCGCCCTGCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 147 Combined Motif Reverse Complement Original Motif AAGCAGGGSGAGGCMYBRCCSGCCAKSSGKGGHGC CTGGGCACCATTGA AAGCAGGGSGAGGCMCTGSSCRCCATYGRKGGHGC Direction: Forward Position #: 16 Overlap #: 14 Alignment: AAGCAGGGSGAGGCMYBRCCSGCCAKSSGKGGHGC ---------------CTGGGCACCATTGA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 352 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 352 Motif 246 Reverse Complement Reverse Complement TGAAGATG TCAGGAGTGAAGCTGC TCAGGAGTGAAGMTGC Direction: Forward Position #: 8 Overlap #: 8 Alignment: -------TGAAGATG- TCAGGAGTGAAGCTGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 303 Combined Motif Reverse Complement Reverse Complement GCARCTTCACTCCTGA ACCATCTTTAAGAACT GCARCTWCMMTCYTKAAGAACT Direction: Forward Position #: 7 Overlap #: 10 Alignment: GCARCTTCACTCCTGA------ ------ACCATCTTTAAGAACT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 227 Combined Motif Original Motif Reverse Complement GCARCTWCMMTCYTKAAGAACT ATTCAASATGAGATTTGGG GCARCTWCMMTYCWARAKRASWTTTGGG Direction: Forward Position #: 10 Overlap #: 13 Alignment: GCARCTWCMMTCYTKAAGAACT------ ---------ATTCAASATGAGATTTGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 280 Combined Motif Reverse Complement Original Motif CCCAAAWSTKYTKTWGMAYYGWAGMTGC CCTAGATTTCAGARGATGT CCCAAAWSTKYTCBTRVATTKHAGAKGMTGT Direction: Forward Position #: 13 Overlap #: 16 Alignment: CCCAAAWSTKYTKTWGMAYYGWAGMTGC--- ------------CCTAGATTTCAGARGATGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 245 Combined Motif Reverse Complement Reverse Complement ACAYCRTCTDRAATVKABGAKRASWTTTGGG TTGAGGAGGCAGTCTG ACAYCRTCTDRAATBGAGGAGGMVDTYTGGG Direction: Forward Position #: 14 Overlap #: 16 Alignment: ACAYCRTCTDRAATVKABGAKRASWTTTGGG -------------TTGAGGAGGCAGTCTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 177 Combined Motif Reverse Complement Reverse Complement CCCAMAHBRCCTCCTCVATTKHAGAKGMTGT ACCGAGMKMGCAGCTTCGGG CCCAMAHBRCCTCMYCDAKYKMRSAGSHTSKGG Direction: Forward Position #: 14 Overlap #: 18 Alignment: CCCAMAHBRCCTCCTCVATTKHAGAKGMTGT-- -------------ACCGAGMKMGCAGCTTCGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 184 Combined Motif Reverse Complement Reverse Complement CCRSAHSCTSKRYKYTHGKYGAGGMVDTYTGGG GGTCAGGATCATCAATAT CCRSAHSCTSKRYKBKTSABGAKSADVWHTRKG Direction: Forward Position #: 15 Overlap #: 18 Alignment: CCRSAHSCTSKRYKYTHGKYGAGGMVDTYTGGG --------------GGTCAGGATCATCAATAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 178 Combined Motif Reverse Complement Original Motif CRKAHWVDTSRTCBTSARBYKMRSAGSHTSKGG ACTGTCTTCCACCTCCACAT CRKAHWVDTSRTCBWCWGTCTTVCASCTYCWSRT Direction: Forward Position #: 15 Overlap #: 19 Alignment: CRKAHWVDTSRTCBTSARBYKMRSAGSHTSKGG- --------------ACTGTCTTCCACCTCCACAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 81 Combined Motif Reverse Complement Original Motif AMSWGMAGSTGVAAGACWGWBGAKSADVWHTRKG CATCTGTAAAAT AMSWGMAGSTGVAAGMMTCTGKAWAATVWHTRKG Direction: Forward Position #: 16 Overlap #: 12 Alignment: AMSWGMAGSTGVAAGACWGWBGAKSADVWHTRKG ---------------CATCTGTAAAAT------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 294 Combined Motif Reverse Complement Reverse Complement CRKAHWVATTWTRCAGAYRCTTVCASCTYCWSRT GTGGCCCTCTTCTCACAGCT CRKAHWVATTWTRCAGTKGCYYTCWTCTCMHVGYT Direction: Forward Position #: 16 Overlap #: 19 Alignment: CRKAHWVATTWTRCAGAYRCTTVCASCTYCWSRT- ---------------GTGGCCCTCTTCTCACAGCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 211 Combined Motif Original Motif Reverse Complement CRKAHWVATTWTRCAGTKGCYYTCWTCTCMHVGYT CGGCTTCATTCTTGAAGTC CRKAHWVATTWTRCASKGSYTCWYTYYTSAAGKCT Direction: Forward Position #: 16 Overlap #: 19 Alignment: CRKAHWVATTWTRCAGTKGCYYTCWTCTCMHVGYT ---------------CGGCTTCATTCTTGAAGTC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 346 Combined Motif Original Motif Reverse Complement CRKAHWVATTWTRCASKGSYTCWYTYYTSAAGKCT GAGCTTTAAGATTT CRKAHWVATTWTRCAGAGCTTYAHKMTTTAAGKCT Direction: Forward Position #: 16 Overlap #: 14 Alignment: CRKAHWVATTWTRCASKGSYTCWYTYYTSAAGKCT ---------------GAGCTTTAAGATTT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 36 Combined Motif Reverse Complement Reverse Complement AGRCTTAAAYYHTMAAGCTCTGKAWAATVWHTRKG CGCCCATCGTCTGGGATGT AGRCTTAAAYYHTMAMGCYCWKCRTCWKGGATGTG Direction: Forward Position #: 16 Overlap #: 19 Alignment: AGRCTTAAAYYHTMAAGCTCTGKAWAATVWHTRKG ---------------CGCCCATCGTCTGGGATGT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 312 Combined Motif Original Motif Original Motif AGRCTTAAAYYHTMAMGCYCWKCRTCWKGGATGTG AGGACTGAGGGTGCCYRGGG AGRCTTAAAYYHTMAAGSACTGMGKSTGSBHKGKG Direction: Forward Position #: 16 Overlap #: 20 Alignment: AGRCTTAAAYYHTMAMGCYCWKCRTCWKGGATGTG ---------------AGGACTGAGGGTGCCYRGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 52 Combined Motif Original Motif Reverse Complement AGRCTTAAAYYHTMAAGSACTGMGKSTGSBHKGKG GGTGGAGCTGCCTGCCAGTC AGRCTTAAAYYHTMARGKRSWGCKGCYKGCCAGTS Direction: Forward Position #: 16 Overlap #: 20 Alignment: AGRCTTAAAYYHTMAAGSACTGMGKSTGSBHKGKG ---------------GGTGGAGCTGCCTGCCAGTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 249 Combined Motif Original Motif Original Motif AGRCTTAAAYYHTMARGKRSWGCKGCYKGCCAGTS TGTGAAGAGACCACCAA AGRCTTAAAYYHTMATGTGRAGMGRCCWSCMAGTS Direction: Forward Position #: 16 Overlap #: 17 Alignment: AGRCTTAAAYYHTMARGKRSWGCKGCYKGCCAGTS ---------------TGTGAAGAGACCACCAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 102 Combined Motif Reverse Complement Original Motif SACTYGSWGGKCYCTKCACATYAHKMTTTAAGKCT CTCATTTAATCCTCACAAC SACTYGSWGGKCYCTYYMMTTTAATCYTYAMRDCT Direction: Forward Position #: 16 Overlap #: 19 Alignment: SACTYGSWGGKCYCTKCACATYAHKMTTTAAGKCT ---------------CTCATTTAATCCTCACAAC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 320 Combined Motif Reverse Complement Original Motif AGDKRTKAMGATTAAARRMKAGMGRCCWSCMAGTS CATCTGGAGCCCCA AGDKRTKAMGATTAAMADCTRGAGVCCCVCMAGTS Direction: Forward Position #: 16 Overlap #: 14 Alignment: AGDKRTKAMGATTAAARRMKAGMGRCCWSCMAGTS ---------------CATCTGGAGCCCCA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 344 Combined Motif Original Motif Original Motif AGDKRTKAMGATTAAMADCTRGAGVCCCVCMAGTS CATAGGAGATGAC AGDKRTKAMGATTAACATMKGRRRTSMCVCMAGTS Direction: Forward Position #: 16 Overlap #: 13 Alignment: AGDKRTKAMGATTAAMADCTRGAGVCCCVCMAGTS ---------------CATAGGAGATGAC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 25 Combined Motif Reverse Complement Reverse Complement SACTYGVGYSAKMKCYYATGTTAATCYTYAMRDCT GTACCTCAGWTGGAAATG SACTYGVGYSAKMKCSTAYSTYARWTGKAAAWGCT Direction: Forward Position #: 16 Overlap #: 18 Alignment: SACTYGVGYSAKMKCYYATGTTAATCYTYAMRDCT ---------------GTACCTCAGWTGGAAATG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 104 Combined Motif Reverse Complement Original Motif AGCWTTTYCAWMTKASKTASGRRRTSMCVCMAGTS CAACATGGATGRARCTGGAG AGCWTTTYCAWMTKASRWMVKGGATGVMVCWRGWG Direction: Forward Position #: 16 Overlap #: 20 Alignment: AGCWTTTYCAWMTKASKTASGRRRTSMCVCMAGTS ---------------CAACATGGATGRARCTGGAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 226 Combined Motif Reverse Complement Reverse Complement CWCMWGBYBCATCCRVRWMSTYARWTGKAAAWGCT CCATGTTTATT CWCMWGBYBCATCCRCSATGTTWATTGKAAAWGCT Direction: Forward Position #: 16 Overlap #: 11 Alignment: CWCMWGBYBCATCCRVRWMSTYARWTGKAAAWGCT ---------------CCATGTTTATT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 322 Combined Motif Original Motif Reverse Complement CWCMWGBYBCATCCRCSATGTTWATTGKAAAWGCT GCAWSTGCAAAGGCCCT CWCMWGBYBCATCCRBCATGTKYAWWGKMMMTGCT Direction: Forward Position #: 16 Overlap #: 17 Alignment: CWCMWGBYBCATCCRCSATGTTWATTGKAAAWGCT ---------------GCAWSTGCAAAGGCCCT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 63 Combined Motif Original Motif Reverse Complement CWCMWGBYBCATCCRBCATGTKYAWWGKMMMTGCT AAAMAMMKMATGTTCTCACT CWCMWGBYBCATCCRAMAHRYBBAATGTYCYYRCT Direction: Forward Position #: 16 Overlap #: 20 Alignment: CWCMWGBYBCATCCRBCATGTKYAWWGKMMMTGCT ---------------AAAMAMMKMATGTTCTCACT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 49 Combined Motif Reverse Complement Reverse Complement AGKKMGMACATTBBMKDTYTKGGATGVMVCWRGWG GGRRMCAGATGT AGKKMGMACATTBBMKGDDHCRGATGDMVCWRGWG Direction: Forward Position #: 16 Overlap #: 12 Alignment: AGKKMGMACATTBBMKDTYTKGGATGVMVCWRGWG ---------------GGRRMCAGATGT-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 70 Combined Motif Reverse Complement Original Motif CWCMWGBYDCATCKGHHDCYYBBAATGTYCYYRCT CTATTGTGAATARTGCTGC CWCMWGBYDCATCKGCTAYYDTGAATRDTSYTRCT Direction: Forward Position #: 16 Overlap #: 19 Alignment: CWCMWGBYDCATCKGHHDCYYBBAATGTYCYYRCT ---------------CTATTGTGAATARTGCTGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 62 Combined Motif Reverse Complement Original Motif AGMAKSAHKATTCAHMMTAGCRGATGDMVCWRGWG AGGAACAGCTCCRGTCTAC AGMAKSAHKATTCAHARKAACAGMTSYAGYCTRHG Direction: Forward Position #: 16 Overlap #: 19 Alignment: AGMAKSAHKATTCAHMMTAGCRGATGDMVCWRGWG ---------------AGGAACAGCTCCRGTCTAC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 362 Combined Motif Reverse Complement Original Motif CDMAGMCTKSARCTGTTYMTDTGAATRDTSYTRCT GCTCTGAAGGTCC CDMAGMCTKSARCTGGYTCTGWARRTCCTSYTRCT Direction: Forward Position #: 16 Overlap #: 13 Alignment: CDMAGMCTKSARCTGTTYMTDTGAATRDTSYTRCT ---------------GCTCTGAAGGTCC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 30 Combined Motif Reverse Complement Original Motif AGMAKSAGGAMMTWCAGAKCCAGMTSYAGYCTRHG AGGAGCGCCTCTKCCCGGC AGMAKSAGGAMMTWCAGRRSCRSCTCTDSCCDGCG Direction: Forward Position #: 16 Overlap #: 19 Alignment: AGMAKSAGGAMMTWCAGAKCCAGMTSYAGYCTRHG ---------------AGGAGCGCCTCTKCCCGGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 339 Combined Motif Original Motif Original Motif AGMAKSAGGAMMTWCAGRRSCRSCTCTDSCCDGCG CTCACCTCCTGC AGMAKSAGGAMMTWCMKCACCDCCTSYDSCCDGCG Direction: Forward Position #: 16 Overlap #: 12 Alignment: AGMAKSAGGAMMTWCAGRRSCRSCTCTDSCCDGCG ---------------CTCACCTCCTGC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 73 Combined Motif Original Motif Original Motif AGMAKSAGGAMMTWCMKCACCDCCTSYDSCCDGCG CAAACTGCAAG AGMAKSAGGAMMTWCCDMACYGCMWGYDSCCDGCG Direction: Forward Position #: 16 Overlap #: 11 Alignment: AGMAKSAGGAMMTWCMKCACCDCCTSYDSCCDGCG ---------------CAAACTGCAAG--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 334 Combined Motif Reverse Complement Reverse Complement CGCHGGSHKCWYGCMGTYDGGWARRTCCTSYTRCT GTGACAGATG CGCHGGSHKCWYGCMGTKASARADGTCCTSYTRCT Direction: Forward Position #: 16 Overlap #: 10 Alignment: CGCHGGSHKCWYGCMGTYDGGWARRTCCTSYTRCT ---------------GTGACAGATG---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 134 Combined Motif Reverse Complement Original Motif AGMAKSAGGACDTMTSTYACYGCMWGYDSCCDGCG CAAACTGCA AGMAKSAGGACDTMTCWMACTGCAWGYDSCCDGCG Direction: Forward Position #: 16 Overlap #: 9 Alignment: AGMAKSAGGACDTMTSTYACYGCMWGYDSCCDGCG ---------------CAAACTGCA----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 207 Combined Motif Reverse Complement Original Motif CGCHGGSHKCWTGCAGTYWGARADGTCCTSYTRCT GACCTTGA CGCHGGSHKSAYSYWGWYWGARADGTCCTSYTRCT Direction: Forward Position #: 10 Overlap #: 8 Alignment: CGCHGGSHKCWTGCAGTYWGARADGTCCTSYTRCT ---------GACCTTGA------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 324 Combined Motif Original Motif Reverse Complement CGCHGGSHKSAYSYWGWYWGARADGTCCTSYTRCT TACAGGTGCGT CGCHGGSHKSAYSYWKACAGRTRBGTCCTSYTRCT Direction: Forward Position #: 16 Overlap #: 11 Alignment: CGCHGGSHKSAYSYWGWYWGARADGTCCTSYTRCT ---------------TACAGGTGCGT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 342 Combined Motif Reverse Complement Reverse Complement AGMAKSAGGACBMAMCTGTRWMSKTSYDSCCDGCG GTTTAATAGGC AGMAKSAGGACBMAMSTKTAAWVGKCYDSCCDGCG Direction: Forward Position #: 16 Overlap #: 11 Alignment: AGMAKSAGGACBMAMCTGTRWMSKTSYDSCCDGCG ---------------GTTTAATAGGC--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 335 Combined Motif Reverse Complement Original Motif CGCHGGSHKGYCBWTTARASRTRBGTCCTSYTRCT GTTAATGCTGA CGCGKKRATGCYGATTARASRTRBGTCCTSYTRCT Direction: Forward Position #: 4 Overlap #: 11 Alignment: CGCHGGSHKGYCBWTTARASRTRBGTCCTSYTRCT ---GTTAATGCTGA--------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 149 Combined Motif Reverse Complement Original Motif AGMAKSAGGACBMAMSTKTAATCMGCATKRRCGCG ACTCAGCCCRCCTGCACCC AGMAKSAGGACBMAMRYTYARYCCGCMTGMACSCG Direction: Forward Position #: 16 Overlap #: 19 Alignment: AGMAKSAGGACBMAMSTKTAATCMGCATKRRCGCG ---------------ACTCAGCCCRCCTGCACCC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 75 Combined Motif Original Motif Reverse Complement AGMAKSAGGACBMAMRYTYARYCCGCMTGMACSCG RRCCGCTCCATG AGMAKSAGGACBMAMRHYCRSTCCRYGTGMACSCG Direction: Forward Position #: 16 Overlap #: 12 Alignment: AGMAKSAGGACBMAMRYTYARYCCGCMTGMACSCG ---------------RRCCGCTCCATG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 185 Combined Motif Original Motif Reverse Complement AGMAKSAGGACBMAMRHYCRSTCCRYGTGMACSCG CYTCATCTTC AGMAKSAGGACBMAMMHTCRBYYYMYGTGMACSCG Direction: Forward Position #: 16 Overlap #: 10 Alignment: AGMAKSAGGACBMAMRHYCRSTCCRYGTGMACSCG ---------------CYTCATCTTC---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 119 Combined Motif Reverse Complement Reverse Complement CGSGTRCACKRMKKVKGAHRRTRBGTCCTSYTRCT KKCACCTTGATCTTGGACTT CGSGTRCACKRMKKVKGMACVTKGRTCTTGBWVYT Direction: Forward Position #: 16 Overlap #: 20 Alignment: CGSGTRCACKRMKKVKGAHRRTRBGTCCTSYTRCT ---------------KKCACCTTGATCTTGGACTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 283 Combined Motif Reverse Complement Original Motif AMVWBCAAGAKCRAVGTRCYBYYYMYGTGMACSCG GCCCTCACCATCC AMVWBCAAGAKCRAVGCCCTCMCCATCYGMACSCG Direction: Forward Position #: 16 Overlap #: 13 Alignment: AMVWBCAAGAKCRAVGTRCYBYYYMYGTGMACSCG ---------------GCCCTCACCATCC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 26 Combined Motif Original Motif Original Motif AMVWBCAAGAKCRAVGCCCTCMCCATCYGMACSCG CTCCTGCCTCAGCCTCCCRA AMVWBCAAGAKCRAVSYCCTVCCYMWSCSHMCCVR Direction: Forward Position #: 16 Overlap #: 20 Alignment: AMVWBCAAGAKCRAVGCCCTCMCCATCYGMACSCG ---------------CTCCTGCCTCAGCCTCCCRA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 202 Combined Motif Original Motif Reverse Complement AMVWBCAAGAKCRAVSYCCTVCCYMWSCSHMCCVR GAAACTGCTTTGTGATGTGT AMVWBCAAGAKCRAVGWMMYTVCTYTGYGATSYGW Direction: Forward Position #: 16 Overlap #: 20 Alignment: AMVWBCAAGAKCRAVSYCCTVCCYMWSCSHMCCVR ---------------GAAACTGCTTTGTGATGTGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 48 Combined Motif Reverse Complement Reverse Complement WCMSATCMCAMAGVAKYYWCVTKGRTCTTGBWVYT CGTCGCTCACGCTGGGAGCT WCMSATCMCAMAGVABBTHSCTBRMKCTKGGAGCT Direction: Forward Position #: 16 Overlap #: 20 Alignment: WCMSATCMCAMAGVAKYYWCVTKGRTCTTGBWVYT ---------------CGTCGCTCACGCTGGGAGCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 208 Combined Motif Reverse Complement Original Motif AGCTCCYAGRRKBAGSDAVBTVCTYTGYGATSYGW GTGAGGGCGAT AGCTCCYAGRRKBAGGTRAGGGCKATGYGATSYGW Direction: Forward Position #: 16 Overlap #: 11 Alignment: AGCTCCYAGRRKBAGSDAVBTVCTYTGYGATSYGW ---------------GTGAGGGCGAT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 179 Combined Motif Reverse Complement Reverse Complement WCMSATCMCATYGCCCTMACCTBRMKCTKGGAGCT GAATACCTCCTGAAGGACCT WCMSATCMCATYGCCSHAWMCYTMCTSWRGGASCT Direction: Forward Position #: 16 Overlap #: 20 Alignment: WCMSATCMCATYGCCCTMACCTBRMKCTKGGAGCT ---------------GAATACCTCCTGAAGGACCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 170 Combined Motif Reverse Complement Original Motif AGSTCCKWSAGRAKGYWTHSGGCKATGYGATSYGW AATCAACCCTGGYRATCAAT AGSTCCKWSAGRAKGHATCARSCCTKGYGATCWRT Direction: Forward Position #: 16 Overlap #: 20 Alignment: AGSTCCKWSAGRAKGYWTHSGGCKATGYGATSYGW ---------------AATCAACCCTGGYRATCAAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 106 Combined Motif Original Motif Reverse Complement AGSTCCKWSAGRAKGHATCARSCCTKGYGATCWRT GGGATTGTAAATACACCAAT AGSTCCKWSAGRAKGDRKMTTGYMWRKHSAYCAAT Direction: Forward Position #: 16 Overlap #: 20 Alignment: AGSTCCKWSAGRAKGHATCARSCCTKGYGATCWRT ---------------GGGATTGTAAATACACCAAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 299 Combined Motif Reverse Complement Reverse Complement ATTGKTSHYKWYMCAAYYMHCYTMCTSWRGGASCT TTGGAGGTTCTAGCAGGG ATTGKTSHYKWYMCATTBVASBTYCTVDMRGRGCT Direction: Forward Position #: 16 Overlap #: 18 Alignment: ATTGKTSHYKWYMCAAYYMHCYTMCTSWRGGASCT ---------------TTGGAGGTTCTAGCAGGG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 295 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 295 Motif 78 Original Motif Original Motif CCCCGCCCC CGAGCCCTGCCCCGCGG GCGGCCCYGCCCCCGAG Direction: Backward Position #: 5 Overlap #: 9 Alignment: ----CCCCGCCCC---- CGAGCCCTGCCCCGCGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 250 Combined Motif Reverse Complement Reverse Complement CTCGGGGGCMGGGCCGC GGAGCGGTGG CTCGGGGGMVSGGYSGC Direction: Forward Position #: 7 Overlap #: 10 Alignment: CTCGGGGGCMGGGCCGC ------GGAGCGGTGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 46 Combined Motif Reverse Complement Original Motif GCSKCCSVRCCCCCGAG CCCCWCCCCCA GCSKCCCCCCHCCCSMR Direction: Forward Position #: 7 Overlap #: 11 Alignment: GCSKCCSVRCCCCCGAG ------CCCCWCCCCCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 92 Original Motif Original Motif GCSKCCCCCCHCCCSMR GGGGGCTGACCCCCCCACC GGGGGCTGMCSCCCCCMCCCCSMR Direction: Forward Position #: 8 Overlap #: 12 Alignment: -------GCSKCCCCCCHCCCSMR GGGGGCTGACCCCCCCACC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 16 Combined Motif Reverse Complement Original Motif MYSGGGGRGGGGGSGYCAGCCCCC GAAAGGGAACTCCCTGACCC MYSGGGGRGGGRRRGBSARCYCCCTGACCC Direction: Forward Position #: 11 Overlap #: 14 Alignment: MYSGGGGRGGGGGSGYCAGCCCCC------ ----------GAAAGGGAACTCCCTGACCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 101 Combined Motif Reverse Complement Original Motif GGGTCAGGGMGMTSBCKKKCCCMCCCCSMR CGCCGCCGCCGC GGGTCAGGGMGMTCGCYGYCSCCSCCCSMR Direction: Forward Position #: 14 Overlap #: 12 Alignment: GGGTCAGGGMGMTSBCKKKCCCMCCCCSMR -------------CGCCGCCGCCGC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 98 Combined Motif Original Motif Reverse Complement GGGTCAGGGMGMTCGCYGYCSCCSCCCSMR CCCACGCCCACCCGGAACT GGGTCAGGGMGMTCSCMSGCCCMCCCSGAACT Direction: Forward Position #: 14 Overlap #: 17 Alignment: GGGTCAGGGMGMTCGCYGYCSCCSCCCSMR-- -------------CCCACGCCCACCCGGAACT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 127 Combined Motif Reverse Complement Reverse Complement AGTTCSGGGYGGGCSYGSGARCYCCCTGACCC GGGGTTGGGG AGTTCSGGGKGGGTBKGGGARCYCCCTGACCC Direction: Forward Position #: 10 Overlap #: 10 Alignment: AGTTCSGGGYGGGCSYGSGARCYCCCTGACCC ---------GGGGTTGGGG------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 75 Combined Motif Original Motif Original Motif AGTTCSGGGKGGGTBKGGGARCYCCCTGACCC CATGGAGCGGKK AGTTCSGGGKGGGTCDKGGAGCBSCCTGACCC Direction: Forward Position #: 15 Overlap #: 12 Alignment: AGTTCSGGGKGGGTBKGGGARCYCCCTGACCC --------------CATGGAGCGGKK------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 42 Combined Motif Reverse Complement Original Motif GGGTCAGGSBGCTCCYDGACCCYCCCSGAACT CTCTGCCCGGCCGC GGGTCAGGSBGCTCCTCKGCCCGSCCGSAACT Direction: Forward Position #: 15 Overlap #: 14 Alignment: GGGTCAGGSBGCTCCYDGACCCYCCCSGAACT --------------CTCTGCCCGGCCGC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 286 Combined Motif Reverse Complement Reverse Complement AGTTSCGGSCGGGCRGAGGAGCBSCCTGACCC CTCCCAGCCGCCTG AGTTSCGGSCGGGCMTMSSAGCCGCCTGACCC Direction: Forward Position #: 15 Overlap #: 14 Alignment: AGTTSCGGSCGGGCRGAGGAGCBSCCTGACCC --------------CTCCCAGCCGCCTG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 155 Combined Motif Reverse Complement Reverse Complement GGGTCAGGCGGCTSSRARGCCCGSCCGSAACT GCCKCCCCGTCCGGGAGGGA GGGTCAGGCGGCTSGSMGCCCCGKCCGGRASKGA Direction: Forward Position #: 15 Overlap #: 18 Alignment: GGGTCAGGCGGCTSSRARGCCCGSCCGSAACT-- --------------GCCKCCCCGTCCGGGAGGGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 13 Combined Motif Original Motif Original Motif GGGTCAGGCGGCTSGSMGCCCCGKCCGGRASKGA AAGCAGGGCGAGGCATTGCC GGGTCAGGCGGCTSGAAGCMSSGYSMGGCAYTGMC Direction: Forward Position #: 16 Overlap #: 19 Alignment: GGGTCAGGCGGCTSGSMGCCCCGKCCGGRASKGA- ---------------AAGCAGGGCGAGGCATTGCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 39 Combined Motif Original Motif Original Motif GGGTCAGGCGGCTSGAAGCMSSGYSMGGCAYTGMC AGGCGGCTGGGAGG GGGTCAGGCGGCTSGARGCVGCKGSRRGGAYTGMC Direction: Forward Position #: 16 Overlap #: 14 Alignment: GGGTCAGGCGGCTSGAAGCMSSGYSMGGCAYTGMC ---------------AGGCGGCTGGGAGG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 111 Combined Motif Original Motif Original Motif GGGTCAGGCGGCTSGARGCVGCKGSRRGGAYTGMC AGGAGCCCCTCHGCCCR GGGTCAGGCGGCTSGAGGMGSCBSKCVGSMCDGMC Direction: Forward Position #: 16 Overlap #: 17 Alignment: GGGTCAGGCGGCTSGARGCVGCKGSRRGGAYTGMC ---------------AGGAGCCCCTCHGCCCR--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 198 Combined Motif Reverse Complement Reverse Complement GYCDGRSCBGRSBGSCYCCTCSAGCCGCCTGACCC TCCCTRCCCT GYCDGRSCBGRSBGSYCCCTSCMSYCGCCTGACCC Direction: Forward Position #: 16 Overlap #: 10 Alignment: GYCDGRSCBGRSBGSCYCCTCSAGCCGCCTGACCC ---------------TCCCTRCCCT---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 197 Combined Motif Original Motif Original Motif GYCDGRSCBGRSBGSYCCCTSCMSYCGCCTGACCC CGCCCGGCCAGC GYCDGRSCBGRSBGSCSCCYGSCCHSSCCTGACCC Direction: Forward Position #: 16 Overlap #: 12 Alignment: GYCDGRSCBGRSBGSYCCCTSCMSYCGCCTGACCC ---------------CGCCCGGCCAGC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 165 Combined Motif Original Motif Reverse Complement GYCDGRSCBGRSBGSCSCCYGSCCHSSCCTGACCC AGCTCMKCCTCCTGTCAGAT GYCDGRSCBGRSBGSMGCYCVGCCTCCYSTSASMY Direction: Forward Position #: 16 Overlap #: 20 Alignment: GYCDGRSCBGRSBGSCSCCYGSCCHSSCCTGACCC ---------------AGCTCMKCCTCCTGTCAGAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 183 Combined Motif Reverse Complement Original Motif KRSTSASMGGAGGCVGMGCYSCBSKCVGSMCDGMC GCCRGCCCTGCYGGCC KRSTSASMGGAGGCVGCSVKCCCTGCHGGCCDGMC Direction: Forward Position #: 16 Overlap #: 16 Alignment: KRSTSASMGGAGGCVGMGCYSCBSKCVGSMCDGMC ---------------GCCRGCCCTGCYGGCC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 2 Combined Motif Original Motif Reverse Complement KRSTSASMGGAGGCVGCSVKCCCTGCHGGCCDGMC GCCACCAMGCCMKGCTAAT KRSTSASMGGAGGCVGCCACCMCKSCMGGCYARHC Direction: Forward Position #: 16 Overlap #: 19 Alignment: KRSTSASMGGAGGCVGCSVKCCCTGCHGGCCDGMC ---------------GCCACCAMGCCMKGCTAAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 263 Combined Motif Original Motif Original Motif KRSTSASMGGAGGCVGCCACCMCKSCMGGCYARHC CCCAGCTCTGCC KRSTSASMGGAGGCVSCCAGCYCTGCCGGCYARHC Direction: Forward Position #: 16 Overlap #: 12 Alignment: KRSTSASMGGAGGCVGCCACCMCKSCMGGCYARHC ---------------CCCAGCTCTGCC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 30 Combined Motif Reverse Complement Original Motif GHMTMGCCGGCAGKGCTGGSVGCCTCCYSTSASMY AGGAGCGCCTCTKCCCGGC GHMTMGCCGGCAGKGMKGRGCGCCTCYTCYCRGCY Direction: Forward Position #: 16 Overlap #: 19 Alignment: GHMTMGCCGGCAGKGCTGGSVGCCTCCYSTSASMY ---------------AGGAGCGCCTCTKCCCGGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 247 Combined Motif Reverse Complement Original Motif KGCKGKGAMGAGGCGCMCYYCYCTGCCGGCYARHC GCCTCACTGCCRC KGCKGKGAMGAGGCGSCCTCMCYGCCVSGCYARHC Direction: Forward Position #: 16 Overlap #: 13 Alignment: KGCKGKGAMGAGGCGCMCYYCYCTGCCGGCYARHC ---------------GCCTCACTGCCRC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 321 Combined Motif Reverse Complement Reverse Complement GHMTMGCSBGGCMGYGAGGSCGCCTCYTCYCRGCY GCTCCACCCAGTTCGAGCTT GHMTMGCSBGGCMGYGMKSCMSCCWSTTCBMGSYT Direction: Forward Position #: 16 Overlap #: 20 Alignment: GHMTMGCSBGGCMGYGAGGSCGCCTCYTCYCRGCY ---------------GCTCCACCCAGTTCGAGCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 164 Combined Motif Reverse Complement Original Motif AMSCYBGAASWGGSYGSYRCMCYGCCVSGCYARHC AGCCCCGGTTCCCGCYCGC AMSCYBGAASWGGSYRGCSCMSKTYCCCGCYHGYC Direction: Forward Position #: 16 Overlap #: 19 Alignment: AMSCYBGAASWGGSYGSYRCMCYGCCVSGCYARHC ---------------AGCCCCGGTTCCCGCYCGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 107 Combined Motif Original Motif Reverse Complement AMSCYBGAASWGGSYRGCSCMSKTYCCCGCYHGYC GGMGCKGTGGCTC AMSCYBGAASWGGSYGGCGCBGTKKCYCGCYHGYC Direction: Forward Position #: 16 Overlap #: 13 Alignment: AMSCYBGAASWGGSYRGCSCMSKTYCCCGCYHGYC ---------------GGMGCKGTGGCTC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 5 Combined Motif Original Motif Reverse Complement AMSCYBGAASWGGSYGGCGCBGTKKCYCGCYHGYC GGAGGCKGAGG AMSCYBGAASWGGSYGGMGSCKKRGSYCGCYHGYC Direction: Forward Position #: 16 Overlap #: 11 Alignment: AMSCYBGAASWGGSYGGCGCBGTKKCYCGCYHGYC ---------------GGAGGCKGAGG--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 17 Combined Motif Reverse Complement Reverse Complement GKCDMGCGMSCKYYGSCYCCMSCCWSTTCBMGSYT TGHCCTGCKCCCACTGTCT GKCDMGCGMSCKYYGTSTCCWGCSMCYWCTRKCTT Direction: Forward Position #: 16 Overlap #: 19 Alignment: GKCDMGCGMSCKYYGSCYCCMSCCWSTTCBMGSYT ---------------TGHCCTGCKCCCACTGTCT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 56 Combined Motif Reverse Complement Original Motif AAGRMAGWKGRSGCWGGASACKKRGSYCGCYHGYC CRTGAGCCACYGYRCCYGGC AAGRMAGWKGRSGCWSGTGASSBASBBCGCCYGBC Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAGRMAGWKGRSGCWGGASACKKRGSYCGCYHGYC ---------------CRTGAGCCACYGYRCCYGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 221 Combined Motif Reverse Complement Reverse Complement GBCKGGCGBBSTBSSTCACSWGCSMCYWCTRKCTT GTGTCCCCTTCCTCCC GBCKGGCGBBSTBSSKYRYCCSCTTCCTCYCKCTT Direction: Forward Position #: 16 Overlap #: 16 Alignment: GBCKGGCGBBSTBSSTCACSWGCSMCYWCTRKCTT ---------------GTGTCCCCTTCCTCCC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 313 Combined Motif Reverse Complement Original Motif AAGRGKGAGGAAGSGGMMMRSSBASBBCGCCYGBC CTCCTGCCTCAGCY AAGRGKGAGGAAGSGSTCCDGCCWCVGCBCCYGBC Direction: Forward Position #: 16 Overlap #: 14 Alignment: AAGRGKGAGGAAGSGGMMMRSSBASBBCGCCYGBC ---------------CTCCTGCCTCAGCY------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 105 Combined Motif Reverse Complement Original Motif GBCKGGBGCBGWGGCDGGASCSCTTCCTCYCKCTT GCCTCTCCCTCCACACCTCC GBCKGGBGCBGWGGCRSSTCTCCYTCCWCMCYYYY Direction: Forward Position #: 16 Overlap #: 20 Alignment: GBCKGGBGCBGWGGCDGGASCSCTTCCTCYCKCTT ---------------GCCTCTCCCTCCACACCTCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 288 Combined Motif Reverse Complement Original Motif KKMKGYGWGGAKGGAGASSMGCCWCVGCBCCYGBC CCCAAGTCCC KKMKGYGWGGAKGGASMCRAGYCYCVGCBCCYGBC Direction: Forward Position #: 16 Overlap #: 10 Alignment: KKMKGYGWGGAKGGAGASSMGCCWCVGCBCCYGBC ---------------CCCAAGTCCC---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 96 Combined Motif Reverse Complement Reverse Complement GBCKGGBGCBGKGMCTKGRSTCCYTCCWCMCYYYY GGAGCCGGCTCCCTCAGCTT GBCKGGBGCBGKGMCKGRGCYSSCTCCMYCMGCTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: GBCKGGBGCBGKGMCTKGRSTCCYTCCWCMCYYYY ---------------GGAGCCGGCTCCCTCAGCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 88 Combined Motif Original Motif Reverse Complement GBCKGGBGCBGKGMCKGRGCYSSCTCCMYCMGCTT TGCAGCCCCGGT GBCKGGBGCBGKGMCTGCRSCCCCKSYMYCMGCTT Direction: Forward Position #: 16 Overlap #: 12 Alignment: GBCKGGBGCBGKGMCKGRGCYSSCTCCMYCMGCTT ---------------TGCAGCCCCGGT-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 161 Combined Motif Original Motif Reverse Complement GBCKGGBGCBGKGMCTGCRSCCCCKSYMYCMGCTT VCCDCCTCCKCCTCCTC GBCKGGBGCBGKGMCBSCDSCYCCKSCYCCHCCTT Direction: Forward Position #: 16 Overlap #: 17 Alignment: GBCKGGBGCBGKGMCTGCRSCCCCKSYMYCMGCTT ---------------VCCDCCTCCKCCTCCTC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 200 Combined Motif Reverse Complement Original Motif AAGGHGGMGSRGGKGSDGSVGYCYCVGCBCCYGBC ACCCCGTCTGGGA AAGGHGGMGSRGGKGRCSCCGTCTSRGMBCCYGBC Direction: Forward Position #: 16 Overlap #: 13 Alignment: AAGGHGGMGSRGGKGSDGSVGYCYCVGCBCCYGBC ---------------ACCCCGTCTGGGA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 220 Combined Motif Reverse Complement Original Motif GBCKGGBYCMSAGACGGSGKCYCCKSCYCCHCCTT TGCACTGCACCCAC GBCKGGBYCMSAGACKGCRCYGCMBCCWCCHCCTT Direction: Forward Position #: 16 Overlap #: 14 Alignment: GBCKGGBYCMSAGACGGSGKCYCCKSCYCCHCCTT ---------------TGCACTGCACCCAC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 122 Combined Motif Reverse Complement Original Motif AAGGHGGWGGBYGCMGKGCRGTCTSRGMBCCYGBC CCTTGGCCAGCCCAGAAAG AAGGHGGWGGBYGCMCCKYGGYCWGCSCASMHRGC Direction: Forward Position #: 16 Overlap #: 19 Alignment: AAGGHGGWGGBYGCMGKGCRGTCTSRGMBCCYGBC ---------------CCTTGGCCAGCCCAGAAAG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 149 Combined Motif Original Motif Original Motif AAGGHGGWGGBYGCMCCKYGGYCWGCSCASMHRGC ACTCAGCCCRCCTGCACCC AAGGHGGWGGBYGCMMCTCRGCCMGCCYGCACMSC Direction: Forward Position #: 16 Overlap #: 19 Alignment: AAGGHGGWGGBYGCMCCKYGGYCWGCSCASMHRGC ---------------ACTCAGCCCRCCTGCACCC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 160 Combined Motif Reverse Complement Original Motif GSRGTGCMGGCRGGCKGAGYYGCMBCCWCCHCCTT AAATTACCCAGTCTCAGGTA GSRGTGCMGGCRGGCWRAKTWSCCASYMYCDSSTW Direction: Forward Position #: 16 Overlap #: 20 Alignment: GSRGTGCMGGCRGGCKGAGYYGCMBCCWCCHCCTT ---------------AAATTACCCAGTCTCAGGTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 26 Combined Motif Original Motif Reverse Complement GSRGTGCMGGCRGGCWRAKTWSCCASYMYCDSSTW TMGGGAGGCTGAGGCAGGAG GSRGTGCMGGCRGGCTVRKKASSCTGHBKCAGGWD Direction: Forward Position #: 16 Overlap #: 20 Alignment: GSRGTGCMGGCRGGCWRAKTWSCCASYMYCDSSTW ---------------TMGGGAGGCTGAGGCAGGAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 309 Combined Motif Original Motif Original Motif GSRGTGCMGGCRGGCTVRKKASSCTGHBKCAGGWD CATTCTGGGGTCTGGAGGAY GSRGTGCMGGCRGGCYATTCWGGSKKCTGSAGGAB Direction: Forward Position #: 16 Overlap #: 20 Alignment: GSRGTGCMGGCRGGCTVRKKASSCTGHBKCAGGWD ---------------CATTCTGGGGTCTGGAGGAY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 259 Combined Motif Original Motif Reverse Complement GSRGTGCMGGCRGGCYATTCWGGSKKCTGSAGGAB TAATAAGGGTGTGGG GSRGTGCMGGCRGGCTAATMAGGGTGYGGGAGGAB Direction: Forward Position #: 16 Overlap #: 15 Alignment: GSRGTGCMGGCRGGCYATTCWGGSKKCTGSAGGAB ---------------TAATAAGGGTGTGGG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 358 Combined Motif Reverse Complement Original Motif VTCCTCCCMCACCCTYATTAGCCMGCCYGCACMSC CGTCCATCACCCC VTCCTCCCMCACCCTCRTYMRYCASCCCGCACMSC Direction: Forward Position #: 16 Overlap #: 13 Alignment: VTCCTCCCMCACCCTYATTAGCCMGCCYGCACMSC ---------------CGTCCATCACCCC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 89 Combined Motif Reverse Complement Original Motif GSRGTGCGGGSTGMKRKAMGAGGGTGYGGGAGGAB GGCTGCGGAGGGTGTA GSRGTGCGGGSTGMKGGMYGMGGRKGKTGKAGGAB Direction: Forward Position #: 16 Overlap #: 16 Alignment: GSRGTGCGGGSTGMKRKAMGAGGGTGYGGGAGGAB ---------------GGCTGCGGAGGGTGTA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 125 Combined Motif Reverse Complement Original Motif VTCCTRCAYCYKCCRCMRCCRYCASCCCGCACMSC CGCCCGGCCAGCCGC VTCCTRCAYCYKCCRCVSCCGKCMASCCGCACMSC Direction: Forward Position #: 16 Overlap #: 15 Alignment: VTCCTRCAYCYKCCRCMRCCRYCASCCCGCACMSC ---------------CGCCCGGCCAGCCGC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 277 Combined Motif Original Motif Original Motif VTCCTRCAYCYKCCRCVSCCGKCMASCCGCACMSC GCCCTCACCAGAAGC VTCCTRCAYCYKCCRSSCCYSRCCAGMMGCACMSC Direction: Forward Position #: 16 Overlap #: 15 Alignment: VTCCTRCAYCYKCCRCVSCCGKCMASCCGCACMSC ---------------GCCCTCACCAGAAGC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 69 Combined Motif Original Motif Reverse Complement VTCCTRCAYCYKCCRSSCCYSRCCAGMMGCACMSC TGTAKTCCCAGCTAC VTCCTRCAYCYKCCRBSYMBBMCCAGCTRCACMSC Direction: Forward Position #: 16 Overlap #: 15 Alignment: VTCCTRCAYCYKCCRSSCCYSRCCAGMMGCACMSC ---------------TGTAKTCCCAGCTAC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 136 Combined Motif Reverse Complement Reverse Complement GSRGTGKAGCTGGRVVRMSVMGGRKGKTGKAGGAB CCCCGGGCAGTGAGGG GSRGTGKAGCTGGRVCSCCVVGSAGKGWGGRGGAB Direction: Forward Position #: 16 Overlap #: 16 Alignment: GSRGTGKAGCTGGRVVRMSVMGGRKGKTGKAGGAB ---------------CCCCGGGCAGTGAGGG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 185 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 185 Motif 161 Reverse Complement Reverse Complement CYTCATCTTC VCCDCCTCCKCCTCCTC CTCCYTCMTCYTCVCCD Direction: Backward Position #: 4 Overlap #: 10 Alignment: ----CYTCATCTTC--- VCCDCCTCCKCCTCCTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 26 Original Motif Original Motif CTCCYTCMTCYTCVCCD CTCCTGCCTCAGCCTCCCRA CTCCTGCCTCMSYCHYCYDMVCCD Direction: Forward Position #: 8 Overlap #: 13 Alignment: -------CTCCYTCMTCYTCVCCD CTCCTGCCTCAGCCTCCCRA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 245 Combined Motif Reverse Complement Reverse Complement DGGVYDKGKHGMSYGAGGCAGGAG TTGAGGAGGCAGTCTG DGGVYDKGKHKHGHGRRGSMRGWSTG Direction: Forward Position #: 11 Overlap #: 14 Alignment: DGGVYDKGKHGMSYGAGGCAGGAG-- ----------TTGAGGAGGCAGTCTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 283 Combined Motif Original Motif Reverse Complement DGGVYDKGKHKHGHGRRGSMRGWSTG GGATGGTGAGGGC DGGVYDKGKHKDGAKGGKGMGGGCTG Direction: Forward Position #: 12 Overlap #: 13 Alignment: DGGVYDKGKHKHGHGRRGSMRGWSTG -----------GGATGGTGAGGGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 5 Combined Motif Original Motif Reverse Complement DGGVYDKGKHKDGAKGGKGMGGGCTG GGAGGCKGAGG DGGVYDKGKHKGGAGGSKGAGGGCTG Direction: Forward Position #: 12 Overlap #: 11 Alignment: DGGVYDKGKHKDGAKGGKGMGGGCTG -----------GGAGGCKGAGG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 178 Combined Motif Original Motif Reverse Complement DGGVYDKGKHKGGAGGSKGAGGGCTG ATGTGGAGGTGGAAGACAGT DGGVYDKGKHKRKRKGSWGRKGGMWGACAGT Direction: Forward Position #: 12 Overlap #: 15 Alignment: DGGVYDKGKHKGGAGGSKGAGGGCTG----- -----------ATGTGGAGGTGGAAGACAGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 165 Combined Motif Reverse Complement Reverse Complement ACTGTCWYCCRMCWSCRKYKRHYCYDMVCCD AGCTCMKCCTCCTGTCAGAT ACTGTCWYCCRMCAGCWBCKMCTCCTVTCMKAT Direction: Forward Position #: 14 Overlap #: 18 Alignment: ACTGTCWYCCRMCWSCRKYKRHYCYDMVCCD-- -------------AGCTCMKCCTCCTGTCAGAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 119 Combined Motif Reverse Complement Reverse Complement ATYYGAVAGGAGRYGBWGCTGRKGGMWGACAGT KKCACCTTGATCTTGGACTT ATYYGAVAGGAGRYKKHRCHKDGRKMTKRSASTT Direction: Forward Position #: 15 Overlap #: 19 Alignment: ATYYGAVAGGAGRYGBWGCTGRKGGMWGACAGT- --------------KKCACCTTGATCTTGGACTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 47 Combined Motif Reverse Complement Original Motif AASTSKYARRMCDYDGMDYYKMCTCCTVTCMKAT GCCTCAGTTTCCY AASTSKYARRMCDYDGCCTCRGYTYCYBTCMKAT Direction: Forward Position #: 16 Overlap #: 13 Alignment: AASTSKYARRMCDYDGMDYYKMCTCCTVTCMKAT ---------------GCCTCAGTTTCCY------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 15 Combined Motif Original Motif Original Motif AASTSKYARRMCDYDGCCTCRGYTYCYBTCMKAT CTTGCGCTTCCCRRGTGA AASTSKYARRMCDYDSYTKCRCTTCCCDDSWGAT Direction: Forward Position #: 16 Overlap #: 18 Alignment: AASTSKYARRMCDYDGCCTCRGYTYCYBTCMKAT ---------------CTTGCGCTTCCCRRGTGA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 102 Combined Motif Original Motif Reverse Complement AASTSKYARRMCDYDSYTKCRCTTCCCDDSWGAT GTTGTGAGGATTAAATGAG AASTSKYARRMCDYDSTTGYGMKKMYYAAVTGAK Direction: Forward Position #: 16 Overlap #: 19 Alignment: AASTSKYARRMCDYDSYTKCRCTTCCCDDSWGAT ---------------GTTGTGAGGATTAAATGAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 298 Combined Motif Original Motif Reverse Complement AASTSKYARRMCDYDSTTGYGMKKMYYAAVTGAK GGTCCTCCTCTAT AASTSKYARRMCDYDGKTSCKCYTCTWWAVTGAK Direction: Forward Position #: 16 Overlap #: 13 Alignment: AASTSKYARRMCDYDSTTGYGMKKMYYAAVTGAK ---------------GGTCCTCCTCTAT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 63 Combined Motif Original Motif Original Motif AASTSKYARRMCDYDGKTSCKCYTCTWWAVTGAK AGTGAGAACATRYRRTRTTT AASTSKYARRMCDYDRGTGMGMMYMTRHRRTGWTT Direction: Forward Position #: 16 Overlap #: 19 Alignment: AASTSKYARRMCDYDGKTSCKCYTCTWWAVTGAK- ---------------AGTGAGAACATRYRRTRTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 280 Combined Motif Reverse Complement Reverse Complement AAWCAMKHKAYKYYCYCACKHKDGRKMTKRSASTT ACATCMTCTGAAATCTAGG AAWCAMKHKAYKYYCWCAYYMTHKGAAWTVTAGKT Direction: Forward Position #: 16 Overlap #: 19 Alignment: AAWCAMKHKAYKYYCYCACKHKDGRKMTKRSASTT ---------------ACATCMTCTGAAATCTAGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 221 Combined Motif Original Motif Reverse Complement AAWCAMKHKAYKYYCWCAYYMTHKGAAWTVTAGKT GTGTCCCCTTCCTCCC AAWCAMKHKAYKYYCDYRTCCYCTKMMTYCCAGKT Direction: Forward Position #: 16 Overlap #: 16 Alignment: AAWCAMKHKAYKYYCWCAYYMTHKGAAWTVTAGKT ---------------GTGTCCCCTTCCTCCC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 105 Combined Motif Original Motif Original Motif AAWCAMKHKAYKYYCDYRTCCYCTKMMTYCCAGKT GCCTCTCCCTCCACACCTCC AAWCAMKHKAYKYYCGCSTCYCCYTCCWCMCMKBY Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAWCAMKHKAYKYYCDYRTCCYCTKMMTYCCAGKT ---------------GCCTCTCCCTCCACACCTCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 132 Combined Motif Reverse Complement Reverse Complement MBRRGYGWGGAKGGMGASGCGMMYMTRHRRTGWTT GCCGCCATCTTG MBRRGYGWGGAKGGMGMCGCSATCWTGHRRTGWTT Direction: Forward Position #: 16 Overlap #: 12 Alignment: MBRRGYGWGGAKGGMGASGCGMMYMTRHRRTGWTT ---------------GCCGCCATCTTG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 294 Combined Motif Reverse Complement Reverse Complement AAWCAMKHCAWGATSGCGYCYCCYTCCWCMCMKBY GTGGCCCTCTTCTCACAGCT AAWCAMKHCAWGATSGYGGCCCYCTYCTCACAGCT Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAWCAMKHCAWGATSGCGYCYCCYTCCWCMCMKBY ---------------GTGGCCCTCTTCTCACAGCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 60 Combined Motif Reverse Complement Reverse Complement AGCTGTGAGMAGMGGGCCMCSATCWTGHRRTGWTT CTCCTGACCTCGTGATC AGCTGTGAGMAGMGGSTCMYGAYCTYGTGATSWTT Direction: Forward Position #: 16 Overlap #: 17 Alignment: AGCTGTGAGMAGMGGGCCMCSATCWTGHRRTGWTT ---------------CTCCTGACCTCGTGATC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 177 Combined Motif Original Motif Original Motif AGCTGTGAGMAGMGGSTCMYGAYCTYGTGATSWTT CCCGAAGCTGCRYRCTCGGT AGCTGTGAGMAGMGGCYCVWRRCYKYGYGMTCDKT Direction: Forward Position #: 16 Overlap #: 20 Alignment: AGCTGTGAGMAGMGGSTCMYGAYCTYGTGATSWTT ---------------CCCGAAGCTGCRYRCTCGGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 333 Combined Motif Reverse Complement Original Motif AYDGARCMCKYMGMKWVGKGCCYCTYCTCACAGCT TAGATAATAGCTCCAGCTTT AYDGARCMCKYMGMKTAGRKMMTMKCYYCASMKYT Direction: Forward Position #: 16 Overlap #: 20 Alignment: AYDGARCMCKYMGMKWVGKGCCYCTYCTCACAGCT ---------------TAGATAATAGCTCCAGCTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 227 Combined Motif Reverse Complement Reverse Complement AMRRSTGKMGYYAYYRKCTARRCYKYGYGMTCDKT ATTCAASATGAGATTTGGG AMRRSTGKMGYYAYYATYYAAGMTGMGAKYTGGGT Direction: Forward Position #: 16 Overlap #: 19 Alignment: AMRRSTGKMGYYAYYRKCTARRCYKYGYGMTCDKT ---------------ATTCAASATGAGATTTGGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 118 Combined Motif Reverse Complement Original Motif ACCCAMRTCYCAYCTTKMATMMTMKCYYCASMKYT CTCARGTGATCCTCC ACCCAMRTCYCAYCTYTCADRHKATCCHCMSMKYT Direction: Forward Position #: 16 Overlap #: 15 Alignment: ACCCAMRTCYCAYCTTKMATMMTMKCYYCASMKYT ---------------CTCARGTGATCCTCC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 155 Combined Motif Original Motif Original Motif ACCCAMRTCYCAYCTYTCADRHKATCCHCMSMKYT TCCCTCCCGGACGGGGYGGC ACCCAMRTCYCAYCTTYCMTCCBRKMCDSSGCGKY Direction: Forward Position #: 16 Overlap #: 20 Alignment: ACCCAMRTCYCAYCTYTCADRHKATCCHCMSMKYT ---------------TCCCTCCCGGACGGGGYGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 184 Combined Motif Reverse Complement Reverse Complement KYCGCSSHGYYMBGGARGKAAGMTGMGAKYTGGGT GGTCAGGATCATCAATAT KYCGCSSHGYYMBGGRGKSARGATSAKMAATRKGT Direction: Forward Position #: 16 Overlap #: 18 Alignment: KYCGCSSHGYYMBGGARGKAAGMTGMGAKYTGGGT ---------------GGTCAGGATCATCAATAT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 262 Combined Motif Original Motif Original Motif KYCGCSSHGYYMBGGRGKSARGATSAKMAATRKGT CTCAGTGTTAATCTCCTGTC KYCGCSSHGYYMBGGSKBMRKGWTAATCTCYTGKY Direction: Forward Position #: 16 Overlap #: 20 Alignment: KYCGCSSHGYYMBGGRGKSARGATSAKMAATRKGT ---------------CTCAGTGTTAATCTCCTGTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 219 Combined Motif Original Motif Original Motif KYCGCSSHGYYMBGGSKBMRKGWTAATCTCYTGKY CTGCAGCCTC KYCGCSSHGYYMBGGCTGCAGSCTCATCTCYTGKY Direction: Forward Position #: 16 Overlap #: 10 Alignment: KYCGCSSHGYYMBGGSKBMRKGWTAATCTCYTGKY ---------------CTGCAGCCTC---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 217 Combined Motif Original Motif Original Motif KYCGCSSHGYYMBGGCTGCAGSCTCATCTCYTGKY CCCTACTGTTCTCY KYCGCSSHGYYMBGGCYSYASBBTYMTCHCYTGKY Direction: Forward Position #: 16 Overlap #: 14 Alignment: KYCGCSSHGYYMBGGCTGCAGSCTCATCTCYTGKY ---------------CCCTACTGTTCTCY------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 313 Combined Motif Original Motif Original Motif KYCGCSSHGYYMBGGCYSYASBBTYMTCHCYTGKY CTCCTGCCTCAGCY KYCGCSSHGYYMBGGCTCCWGCCTCAKCYCYTGKY Direction: Forward Position #: 16 Overlap #: 14 Alignment: KYCGCSSHGYYMBGGCYSYASBBTYMTCHCYTGKY ---------------CTCCTGCCTCAGCY------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 30 Combined Motif Reverse Complement Original Motif KRCAMGMGYTGAGGCWGGAGCCBRKMCDSSGCGKY AGGAGCGCCTCTKCCCGGC KRCAMGMGYTGAGGCAGGAGCSCCTCYKCCSVGCY Direction: Forward Position #: 16 Overlap #: 19 Alignment: KRCAMGMGYTGAGGCWGGAGCCBRKMCDSSGCGKY ---------------AGGAGCGCCTCTKCCCGGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 211 Combined Motif Original Motif Reverse Complement KRCAMGMGYTGAGGCAGGAGCSCCTCYKCCSVGCY CGGCTTCATTCTTGAAGTC KRCAMGMGYTGAGGCMGGMKYCMBTCTTSMMGKCY Direction: Forward Position #: 16 Overlap #: 19 Alignment: KRCAMGMGYTGAGGCAGGAGCSCCTCYKCCSVGCY ---------------CGGCTTCATTCTTGAAGTC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 36 Combined Motif Original Motif Reverse Complement KRCAMGMGYTGAGGCMGGMKYCMBTCTTSMMGKCY CGCCCATCGTCTGGGATGT KRCAMGMGYTGAGGCCGSCBWYCGTCTKGGAKGYY Direction: Forward Position #: 16 Overlap #: 19 Alignment: KRCAMGMGYTGAGGCMGGMKYCMBTCTTSMMGKCY ---------------CGCCCATCGTCTGGGATGT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 121 Combined Motif Reverse Complement Reverse Complement KMCRTCCYAGACGMWBGSCGGCCTCAKCYCYTGKY TGGAGGTTSTAG KMCRTCCYAGACGMWTGGMGGYYBYAGCYCYTGKY Direction: Forward Position #: 16 Overlap #: 12 Alignment: KMCRTCCYAGACGMWBGSCGGCCTCAKCYCYTGKY ---------------TGGAGGTTSTAG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 96 Combined Motif Original Motif Original Motif KMCRTCCYAGACGMWTGGMGGYYBYAGCYCYTGKY AAGCTGAGGGAGCCGGCTCC KMCRTCCYAGACGMWWRGCKGWKGKAGCYVBCTYY Direction: Forward Position #: 16 Overlap #: 20 Alignment: KMCRTCCYAGACGMWTGGMGGYYBYAGCYCYTGKY ---------------AAGCTGAGGGAGCCGGCTCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 55 Combined Motif Reverse Complement Original Motif KKAGBVKGCTYCYWCRGCKWWYCGTCTKGGAKGYY ATGGAATAYTATTCAGCCAT KKAGBVKGCTYCYWCAKSGAATMBTMTKSRRYSWT Direction: Forward Position #: 16 Overlap #: 20 Alignment: KKAGBVKGCTYCYWCRGCKWWYCGTCTKGGAKGYY ---------------ATGGAATAYTATTCAGCCAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 89 Combined Motif Reverse Complement Original Motif AWSKMKSRAYABYATTCSRTGWKGKAGCYVBCTYY GGCTGCGGAGGGTGTA AWSKMKSRAYABYATKSCTKSRGRGRGYGTRCTYY Direction: Forward Position #: 16 Overlap #: 16 Alignment: AWSKMKSRAYABYATTCSRTGWKGKAGCYVBCTYY ---------------GGCTGCGGAGGGTGTA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 6 Combined Motif Original Motif Reverse Complement AWSKMKSRAYABYATKSCTKSRGRGRGYGTRCTYY GAGSTTGCAGTGAGC AWSKMKSRAYABYATGDSBKBGSAGDGWGCRCTYY Direction: Forward Position #: 16 Overlap #: 15 Alignment: AWSKMKSRAYABYATKSCTKSRGRGRGYGTRCTYY ---------------GAGSTTGCAGTGAGC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 72 Combined Motif Original Motif Reverse Complement AWSKMKSRAYABYATGDSBKBGSAGDGWGCRCTYY GGCTGAGGAGTGCG AWSKMKSRAYABYATGGCTGAGGAGTGMGCRCTYY Direction: Forward Position #: 16 Overlap #: 14 Alignment: AWSKMKSRAYABYATGDSBKBGSAGDGWGCRCTYY ---------------GGCTGAGGAGTGCG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 266 Combined Motif Original Motif Original Motif AWSKMKSRAYABYATGGCTGAGGAGTGMGCRCTYY GCAGCAGCAGCA AWSKMKSRAYABYATGSMKSAGSAGYRMGCRCTYY Direction: Forward Position #: 16 Overlap #: 12 Alignment: AWSKMKSRAYABYATGGCTGAGGAGTGMGCRCTYY ---------------GCAGCAGCAGCA-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 133 Combined Motif Reverse Complement Reverse Complement KKAGKGCRMKCTSCTSYYSCATMBTMTKSRRYSWT TGGGGACMCAG KKAGKGCRMKCTSCTKSKGSAYMCWVTKSRRYSWT Direction: Forward Position #: 16 Overlap #: 11 Alignment: KKAGKGCRMKCTSCTSYYSCATMBTMTKSRRYSWT ---------------TGGGGACMCAG--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 182 Combined Motif Reverse Complement Original Motif AWSKMKSRAVWGYKTSCYSRAGSAGYRMGCRCTYY GACCAMGAACCCA AWSKMKSRAVWGYKTGMCCAAGMASCSAGCRCTYY Direction: Forward Position #: 16 Overlap #: 13 Alignment: AWSKMKSRAVWGYKTSCYSRAGSAGYRMGCRCTYY ---------------GACCAMGAACCCA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 354 Combined Motif Original Motif Original Motif AWSKMKSRAVWGYKTGMCCAAGMASCSAGCRCTYY GCTGATAAAGAC AWSKMKSRAVWGYKTGCYSAWRAAGMCAGCRCTYY Direction: Forward Position #: 16 Overlap #: 12 Alignment: AWSKMKSRAVWGYKTGMCCAAGMASCSAGCRCTYY ---------------GCTGATAAAGAC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 23 Combined Motif Reverse Complement Original Motif KKAGKGCTGYCTTKWTSMGCAYMCWVTKSRRYSWT GGTTCATCTCACTAGGGAGT KKAGKGCTGYCTTKWKGWKCATCYCAYTVGGGVDT Direction: Forward Position #: 16 Overlap #: 20 Alignment: KKAGKGCTGYCTTKWTSMGCAYMCWVTKSRRYSWT ---------------GGTTCATCTCACTAGGGAGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 99 Combined Motif Reverse Complement Original Motif AHBCCCVAKTGMGATGRWCYWRAAGMCAGCRCTYY GCAAAKGACATGATYTCATT AHBCCCVAKTGMGATGVAMMDGAMRHSAKYTCDTY Direction: Forward Position #: 16 Overlap #: 20 Alignment: AHBCCCVAKTGMGATGRWCYWRAAGMCAGCRCTYY ---------------GCAAAKGACATGATYTCATT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 94 Combined Motif Original Motif Reverse Complement AHBCCCVAKTGMGATGVAMMDGAMRHSAKYTCDTY GMTTAGCTCCCACTTA AHBCCCVAKTGMGATGMWHAGSWCCCAMTTACDTY Direction: Forward Position #: 16 Overlap #: 16 Alignment: AHBCCCVAKTGMGATGVAMMDGAMRHSAKYTCDTY ---------------GMTTAGCTCCCACTTA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 53 Combined Motif Reverse Complement Original Motif MADGTAARTGGGWSCTHWRCATCYCAYTVGGGVDT GTCCCATCGACCACCCAAG MADGTAARTGGGWSCKTMCCATCKAMCWCSSRAGT Direction: Forward Position #: 16 Overlap #: 19 Alignment: MADGTAARTGGGWSCTHWRCATCYCAYTVGGGVDT ---------------GTCCCATCGACCACCCAAG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 114 Combined Motif Original Motif Original Motif MADGTAARTGGGWSCKTMCCATCKAMCWCSSRAGT CTACGTTCTC MADGTAARTGGGWSCCTACSWTCTCMCWCSSRAGT Direction: Forward Position #: 16 Overlap #: 10 Alignment: MADGTAARTGGGWSCKTMCCATCKAMCWCSSRAGT ---------------CTACGTTCTC---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 129 Combined Motif Reverse Complement Reverse Complement ACTKSSGWGRGAGAWSGTAGGSWCCCAMTTACDTY TGAGKCAATTAAACCTCTT ACTKSSGWGRGAGAWTGWRKSVAHYMAAYYTCTTY Direction: Forward Position #: 16 Overlap #: 19 Alignment: ACTKSSGWGRGAGAWSGTAGGSWCCCAMTTACDTY ---------------TGAGKCAATTAAACCTCTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 356 Combined Motif Original Motif Original Motif ACTKSSGWGRGAGAWTGWRKSVAHYMAAYYTCTTY AATTAAAAGACACAGACTG ACTKSSGWGRGAGAWWRTTDVAABWCAMASACTKY Direction: Forward Position #: 16 Overlap #: 19 Alignment: ACTKSSGWGRGAGAWTGWRKSVAHYMAAYYTCTTY ---------------AATTAAAAGACACAGACTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 357 Combined Motif Original Motif Original Motif ACTKSSGWGRGAGAWWRTTDVAABWCAMASACTKY CAAGTTGACACATAAAATTA ACTKSSGWGRGAGAWCAWKTTRACACAYAVAMTTW Direction: Forward Position #: 16 Overlap #: 20 Alignment: ACTKSSGWGRGAGAWWRTTDVAABWCAMASACTKY ---------------CAAGTTGACACATAAAATTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 338 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 338 Motif 68 Reverse Complement Original Motif GGCTGCAG CATGGCGGGCTGCAGGTC CATGGCKGSMKGCAGGTC Direction: Forward Position #: 4 Overlap #: 8 Alignment: ---GGCTGCAG------- CATGGCGGGCTGCAGGTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 219 Combined Motif Reverse Complement Original Motif GACCTGCRRSCRGCCATG CTGCAGCCTC GACCTGCMKGCAGCCWYG Direction: Forward Position #: 8 Overlap #: 10 Alignment: GACCTGCRRSCRGCCATG -------CTGCAGCCTC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 149 Reverse Complement Reverse Complement CKWGGCTGCRRGCAGGTC GGGTGCAGGMGGGCTGAGT GGGTGCASGHGGSYKSAGKCAGGTC Direction: Forward Position #: 8 Overlap #: 12 Alignment: -------CKWGGCTGCRRGCAGGTC GGGTGCAGGMGGGCTGAGT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 89 Combined Motif Original Motif Original Motif GGGTGCASGHGGSYKSAGKCAGGTC GGCTGCGGAGGGTGTA GGGTGCASGHGGCTGCRGDSRGKKYA Direction: Forward Position #: 11 Overlap #: 15 Alignment: GGGTGCASGHGGSYKSAGKCAGGTC- ----------GGCTGCGGAGGGTGTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 220 Combined Motif Original Motif Reverse Complement GGGTGCASGHGGCTGCRGDSRGKKYA GTGGGTGCAGTGCA GGGTGCASGHGGYKGSTGMAGKGCHA Direction: Forward Position #: 12 Overlap #: 14 Alignment: GGGTGCASGHGGCTGCRGDSRGKKYA -----------GTGGGTGCAGTGCA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 320 Combined Motif Original Motif Reverse Complement GGGTGCASGHGGYKGSTGMAGKGCHA TGGGGCTCCAGATG GGGTGCASGHGKGGGGYKCCRGRTDA Direction: Forward Position #: 12 Overlap #: 14 Alignment: GGGTGCASGHGGYKGSTGMAGKGCHA -----------TGGGGCTCCAGATG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 191 Combined Motif Original Motif Original Motif GGGTGCASGHGKGGGGYKCCRGRTDA AAAGTGCCGAGAKTGCAGC GGGTGCASGHGARRGKGBCSAGAKTRCAGC Direction: Forward Position #: 12 Overlap #: 15 Alignment: GGGTGCASGHGKGGGGYKCCRGRTDA---- -----------AAAGTGCCGAGAKTGCAGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 17 Combined Motif Original Motif Reverse Complement GGGTGCASGHGARRGKGBCSAGAKTRCAGC TGHCCTGCKCCCACTGTCT GGGTGCASGHGARTGBSCYGMGMCYACWGYCT Direction: Forward Position #: 14 Overlap #: 17 Alignment: GGGTGCASGHGARRGKGBCSAGAKTRCAGC-- -------------TGHCCTGCKCCCACTGTCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 245 Combined Motif Reverse Complement Original Motif AGKCWGTKGRCRCMGSVCAKTCHCSTGCACCC CAGACTGCCTCCTCAA AGKCWGTKGRCRCMSRGMMTGCCYCYKCAMCC Direction: Forward Position #: 15 Overlap #: 16 Alignment: AGKCWGTKGRCRCMGSVCAKTCHCSTGCACCC --------------CAGACTGCCTCCTCAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 333 Combined Motif Original Motif Original Motif AGKCWGTKGRCRCMSRGMMTGCCYCYKCAMCC TAGATAATAGCTCCAGCTTT AGKCWGTKGRCRCMTAGATWRYMKCTSCAVCYTT Direction: Forward Position #: 15 Overlap #: 18 Alignment: AGKCWGTKGRCRCMSRGMMTGCCYCYKCAMCC-- --------------TAGATAATAGCTCCAGCTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 6 Combined Motif Original Motif Original Motif AGKCWGTKGRCRCMTAGATWRYMKCTSCAVCYTT GCTCACTGCAASCTC AGKCWGTKGRCRCMTRSWYAHTRCMWSCWCCYTT Direction: Forward Position #: 16 Overlap #: 15 Alignment: AGKCWGTKGRCRCMTAGATWRYMKCTSCAVCYTT ---------------GCTCACTGCAASCTC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 39 Combined Motif Original Motif Reverse Complement AGKCWGTKGRCRCMTRSWYAHTRCMWSCWCCYTT CCTCCCAGCCGCCT AGKCWGTKGRCRCMTSCTCVCWGCCDCCTCCYTT Direction: Forward Position #: 16 Overlap #: 14 Alignment: AGKCWGTKGRCRCMTRSWYAHTRCMWSCWCCYTT ---------------CCTCCCAGCCGCCT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 239 Combined Motif Reverse Complement Reverse Complement AAKGGAGGHGGCWGVGAGSAYGMGMCYACWGYCT ACAGTTCTGGAGGCT AAKGGAGGHGGCWGVRMRGHTSHGSMSRCTGYCT Direction: Forward Position #: 16 Overlap #: 15 Alignment: AAKGGAGGHGGCWGVGAGSAYGMGMCYACWGYCT ---------------ACAGTTCTGGAGGCT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 266 Combined Motif Reverse Complement Reverse Complement AGKCAGMSYSCHSAHCKYKVCWGCCDCCTCCYTT TGCTGCTGCTGC AGKCAGMSYSCHSAHYGCTGCTGCYGCCTCCYTT Direction: Forward Position #: 16 Overlap #: 12 Alignment: AGKCAGMSYSCHSAHCKYKVCWGCCDCCTCCYTT ---------------TGCTGCTGCTGC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 321 Combined Motif Reverse Complement Original Motif AAKGGAGGCMGCAGCAGCMHTSHGSMSRCTGYCT AAGCTCGAACTGGGTGGAGC AAKGGAGGCMGCAGCARSCTYSARCTGGSTGBMKC Direction: Forward Position #: 16 Overlap #: 19 Alignment: AAKGGAGGCMGCAGCAGCMHTSHGSMSRCTGYCT- ---------------AAGCTCGAACTGGGTGGAGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 289 Combined Motif Reverse Complement Original Motif GYRBCASCCAGKTSKAGSKTGCTGCYGCCTCCYTT TGATGGGTGCACCAAA GYRBCASCCAGKTSKWGMTKGSTGCASCMWMCYTT Direction: Forward Position #: 16 Overlap #: 16 Alignment: GYRBCASCCAGKTSKAGSKTGCTGCYGCCTCCYTT ---------------TGATGGGTGCACCAAA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 313 Combined Motif Original Motif Original Motif GYRBCASCCAGKTSKWGMTKGSTGCASCMWMCYTT CTCCTGCCTCAGCY GYRBCASCCAGKTSKYKCYTGCYKCAGCHWMCYTT Direction: Forward Position #: 16 Overlap #: 14 Alignment: GYRBCASCCAGKTSKWGMTKGSTGCASCMWMCYTT ---------------CTCCTGCCTCAGCY------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 101 Combined Motif Original Motif Original Motif GYRBCASCCAGKTSKYKCYTGCYKCAGCHWMCYTT CGCCGCCGCCGC GYRBCASCCAGKTSKCGCCKSCBBCRSCHWMCYTT Direction: Forward Position #: 16 Overlap #: 12 Alignment: GYRBCASCCAGKTSKYKCYTGCYKCAGCHWMCYTT ---------------CGCCGCCGCCGC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 229 Combined Motif Original Motif Original Motif GYRBCASCCAGKTSKCGCCKSCBBCRSCHWMCYTT GCCTTGCTGCCGC GYRBCASCCAGKTSKSSCYKGCTGCVSCHWMCYTT Direction: Forward Position #: 16 Overlap #: 13 Alignment: GYRBCASCCAGKTSKCGCCKSCBBCRSCHWMCYTT ---------------GCCTTGCTGCCGC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 350 Combined Motif Original Motif Reverse Complement GYRBCASCCAGKTSKSSCYKGCTGCVSCHWMCYTT TGCTGGAGGTCCACTCCAGA GYRBCASCCAGKTSKKGCTKGMKGYCCMCWCCMKW Direction: Forward Position #: 16 Overlap #: 20 Alignment: GYRBCASCCAGKTSKSSCYKGCTGCVSCHWMCYTT ---------------TGCTGGAGGTCCACTCCAGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 211 Combined Motif Original Motif Original Motif GYRBCASCCAGKTSKKGCTKGMKGYCCMCWCCMKW GACTTCAAGAATGAAGCCG GYRBCASCCAGKTSKGRCTTSARGHMYGMWSCCGW Direction: Forward Position #: 16 Overlap #: 19 Alignment: GYRBCASCCAGKTSKKGCTKGMKGYCCMCWCCMKW ---------------GACTTCAAGAATGAAGCCG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 55 Combined Motif Reverse Complement Reverse Complement WCGGSWYCMYHCMTSAAGKCYSARCTGGSTGBMKC ATGGCTGAATAKTATTCCAT WCGGSWYCMYHCMTSAWGGCTGAAYAGKVTKCCRY Direction: Forward Position #: 16 Overlap #: 20 Alignment: WCGGSWYCMYHCMTSAAGKCYSARCTGGSTGBMKC ---------------ATGGCTGAATAKTATTCCAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 285 Combined Motif Reverse Complement Original Motif KKGGRABRCTMTTCAGCCWTSARGHMYGMWSCCGW CACTGCACTCCAGC KKGGRABRCTMTTCASMCTKCAVKCCAGCWSCCGW Direction: Forward Position #: 16 Overlap #: 14 Alignment: KKGGRABRCTMTTCAGCCWTSARGHMYGMWSCCGW ---------------CACTGCACTCCAGC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 3 Combined Motif Reverse Complement Reverse Complement WCGGSWGCTGGRVTGYAGYSTGAAYAGKVTKCCRY TCKMGCCACTGCACTCCAGC WCGGSWGCTGGRVTGTMGHGYSAMTRSACTBCMGC Direction: Forward Position #: 16 Overlap #: 20 Alignment: WCGGSWGCTGGRVTGYAGYSTGAAYAGKVTKCCRY ---------------TCKMGCCACTGCACTCCAGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 67 Combined Motif Reverse Complement Reverse Complement GCYGBAGTSMARTSKCDCYACAVKCCAGCWSCCGW CACCAGACTCAGGAGCCCAG GCYGBAGTSMARTSKCACCASACTCMRGARCCCRD Direction: Forward Position #: 16 Overlap #: 20 Alignment: GCYGBAGTSMARTSKCDCYACAVKCCAGCWSCCGW ---------------CACCAGACTCAGGAGCCCAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 183 Combined Motif Original Motif Reverse Complement GCYGBAGTSMARTSKCACCASACTCMRGARCCCRD GGCCMGCAGGGCKGGC GCYGBAGTSMARTSKSRCCAGMMKSRCGRGCCCRD Direction: Forward Position #: 16 Overlap #: 16 Alignment: GCYGBAGTSMARTSKCACCASACTCMRGARCCCRD ---------------GGCCMGCAGGGCKGGC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 144 Combined Motif Reverse Complement Original Motif HKGGGCMCGMSYYRCTGGMSYSAMTRSACTBCMGC CCGCTGCACTGTGGGAGCCC HKGGGCMCGMSYYRCYSGCYSCACTGTGSKVSMSC Direction: Forward Position #: 16 Overlap #: 20 Alignment: HKGGGCMCGMSYYRCTGGMSYSAMTRSACTBCMGC ---------------CCGCTGCACTGTGGGAGCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 61 Combined Motif Original Motif Reverse Complement HKGGGCMCGMSYYRCYSGCYSCACTGTGSKVSMSC TGGCTTCACCCAGTGGATCC HKGGGCMCGMSYYRCYGGCTTCACYVWGKGGRYCC Direction: Forward Position #: 16 Overlap #: 20 Alignment: HKGGGCMCGMSYYRCYSGCYSCACTGTGSKVSMSC ---------------TGGCTTCACCCAGTGGATCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 26 Combined Motif Reverse Complement Original Motif GGMKCCRCWVKGTGAAGCCMGMMKSRCGRGCCCRD CTCCTGCCTCAGCCTCCCRA GGMKCCRCWVKGTGAMKCCHGCCTCAGSVKCCCRA Direction: Forward Position #: 16 Overlap #: 20 Alignment: GGMKCCRCWVKGTGAAGCCMGMMKSRCGRGCCCRD ---------------CTCCTGCCTCAGCCTCCCRA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 309 Combined Motif Original Motif Reverse Complement GGMKCCRCWVKGTGAMKCCHGCCTCAGSVKCCCRA MTCCTCCAGACCCCAGAATG GGMKCCRCWVKGTGAMTCCTSCAKMMSCCASMMWR Direction: Forward Position #: 16 Overlap #: 20 Alignment: GGMKCCRCWVKGTGAMKCCHGCCTCAGSVKCCCRA ---------------MTCCTCCAGACCCCAGAATG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 193 Combined Motif Original Motif Reverse Complement GGMKCCRCWVKGTGAMTCCTSCAKMMSCCASMMWR GKCTGTACCCCCATTGTAT GGMKCCRCWVKGTGAVTCYKYMMSMCCMYTGHATR Direction: Forward Position #: 16 Overlap #: 19 Alignment: GGMKCCRCWVKGTGAMTCCTSCAKMMSCCASMMWR ---------------GKCTGTACCCCCATTGTAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 205 Combined Motif Reverse Complement Reverse Complement MATHCAMYGGRSRYMYMGAVTCACYVWGKGGRYCC TGGGCTGCCAGATG MATHCAMYGGRSRYMYRGRCTSMCMGAKGGGRYCC Direction: Forward Position #: 16 Overlap #: 14 Alignment: MATHCAMYGGRSRYMYMGAVTCACYVWGKGGRYCC ---------------TGGGCTGCCAGATG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 286 Combined Motif Original Motif Original Motif MATHCAMYGGRSRYMYRGRCTSMCMGAKGGGRYCC CAGGCGGCTGGGAG MATHCAMYGGRSRYMCAGGCKGCYRGRAGGGRYCC Direction: Forward Position #: 16 Overlap #: 14 Alignment: MATHCAMYGGRSRYMYRGRCTSMCMGAKGGGRYCC ---------------CAGGCGGCTGGGAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 72 Combined Motif Original Motif Original Motif MATHCAMYGGRSRYMCAGGCKGCYRGRAGGGRYCC CGCACTCCTCAGCC MATHCAMYGGRSRYMCRSRCTSCTCRGMSGGRYCC Direction: Forward Position #: 16 Overlap #: 14 Alignment: MATHCAMYGGRSRYMCAGGCKGCYRGRAGGGRYCC ---------------CGCACTCCTCAGCC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 301 Combined Motif Original Motif Original Motif MATHCAMYGGRSRYMCRSRCTSCTCRGMSGGRYCC CCAAGACYCCAGAC MATHCAMYGGRSRYMCSVASWCYYCAGACGGRYCC Direction: Forward Position #: 16 Overlap #: 14 Alignment: MATHCAMYGGRSRYMCRSRCTSCTCRGMSGGRYCC ---------------CCAAGACYCCAGAC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 29 Combined Motif Reverse Complement Original Motif GGMKCCGTCTGKKGWSTBSGYMMSMCCMYTGHATR CTGGGCRACAGAGYRAGACY GGMKCCGTCTGKKGWCTGGGYVACASMRYDRDAYD Direction: Forward Position #: 16 Overlap #: 20 Alignment: GGMKCCGTCTGKKGWSTBSGYMMSMCCMYTGHATR ---------------CTGGGCRACAGAGYRAGACY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 176 Combined Motif Reverse Complement Reverse Complement DKTHKDKMYSTGTBKCCCAGWCYYCAGACGGRYCC AACAACASACACTGGGGCCT DKTHKDKMYSTGTBKMMCADHMCMCASHSGGGYCY Direction: Forward Position #: 16 Overlap #: 20 Alignment: DKTHKDKMYSTGTBKCCCAGWCYYCAGACGGRYCC ---------------AACAACASACACTGGGGCCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 62 Combined Motif Reverse Complement Original Motif MGKCCCSHSTGYGYDHTGYYYVACASMRYDRDAYD AGGAACAGCTCCRGTCTAC MGKCCCSHSTGYGYDAKGWWCARCWCCRGTCTACD Direction: Forward Position #: 16 Overlap #: 19 Alignment: MGKCCCSHSTGYGYDHTGYYYVACASMRYDRDAYD ---------------AGGAACAGCTCCRGTCTAC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 49 Combined Motif Original Motif Reverse Complement MGKCCCSHSTGYGYDAKGWWCARCWCCRGTCTACD GGRRMCAGATGT MGKCCCSHSTGYGYDRGGDACAGMTSHRGTCTACD Direction: Forward Position #: 16 Overlap #: 12 Alignment: MGKCCCSHSTGYGYDAKGWWCARCWCCRGTCTACD ---------------GGRRMCAGATGT-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 111 Combined Motif Original Motif Original Motif MGKCCCSHSTGYGYDRGGDACAGMTSHRGTCTACD AGGAGCCCCTCHGCCCR MGKCCCSHSTGYGYDAGGAGCMSCTCHGCYCDACD Direction: Forward Position #: 16 Overlap #: 17 Alignment: MGKCCCSHSTGYGYDRGGDACAGMTSHRGTCTACD ---------------AGGAGCCCCTCHGCCCR--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 188 Combined Motif Reverse Complement Original Motif DGTDGKGCDGAGSYGCTCCTHMCMCASHSGGGYCY CTCCAGACACATC DGTDGKGCDGAGSYGCTCCWVACACATCSGGGYCY Direction: Forward Position #: 16 Overlap #: 13 Alignment: DGTDGKGCDGAGSYGCTCCTHMCMCASHSGGGYCY ---------------CTCCAGACACATC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 215 Combined Motif Reverse Complement Reverse Complement MGKCCCSGATGTGTVWGGAGCMSCTCHGCYCDACD GGGRSCACAGGAGCD MGKCCCSGATGTGTVGGGAGCACHKSAGCBCDACD Direction: Forward Position #: 16 Overlap #: 15 Alignment: MGKCCCSGATGTGTVWGGAGCMSCTCHGCYCDACD ---------------GGGRSCACAGGAGCD----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 234 Combined Motif Reverse Complement Reverse Complement DGTDGBGCTSYHGTGCTCCCVACACATCSGGGYCY GTGTCKGGAGTTTGTTCCTT DGTDGBGCTSYHGTGSTSYCDRSASWTYGKKSCYT Direction: Forward Position #: 16 Overlap #: 20 Alignment: DGTDGBGCTSYHGTGCTCCCVACACATCSGGGYCY ---------------GTGTCKGGAGTTTGTTCCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 104 Combined Motif Original Motif Reverse Complement DGTDGBGCTSYHGTGSTSYCDRSASWTYGKKSCYT CTCCAGKTMCATCCATGTTG DGTDGBGCTSYHGTGSTCCMGDKACATCSDTGYTB Direction: Forward Position #: 16 Overlap #: 20 Alignment: DGTDGBGCTSYHGTGSTSYCDRSASWTYGKKSCYT ---------------CTCCAGKTMCATCCATGTTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 4 Combined Motif Reverse Complement Reverse Complement VAMCADSGATGTRHCYGGASCACHKSAGCBCDACD CCTGTAATCCCAGC VAMCADSGATGTRHCYSKRKMAYCBSAGCBCDACD Direction: Forward Position #: 16 Overlap #: 14 Alignment: VAMCADSGATGTRHCYGGASCACHKSAGCBCDACD ---------------CCTGTAATCCCAGC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 5 Combined Motif Reverse Complement Reverse Complement DGTDGBGCTSBGMTYRMRSKGDKACATCSDTGYTB GGAGGCKGAGG DGTDGBGCTSBGMTYGGAGGSKKASRTCSDTGYTB Direction: Forward Position #: 16 Overlap #: 11 Alignment: DGTDGBGCTSBGMTYRMRSKGDKACATCSDTGYTB ---------------GGAGGCKGAGG--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 121 Combined Motif Reverse Complement Original Motif VAMCADSGAMSTYRSCCTCCMAYCBSAGCBCDACD CTASAACCTCCA VAMCADSGAMSTYRSCYWSMAMCYCCAGCBCDACD Direction: Forward Position #: 16 Overlap #: 12 Alignment: VAMCADSGAMSTYRSCCTCCMAYCBSAGCBCDACD ---------------CTASAACCTCCA-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 240 Combined Motif Reverse Complement Reverse Complement DGTDGBGCTGGMGRTYSWMGSKKASRTCSDTGYTB GGGACWGCACAT DGTDGBGCTGGMGRTKGGASHGCACATCSDTGYTB Direction: Forward Position #: 16 Overlap #: 12 Alignment: DGTDGBGCTGGMGRTYSWMGSKKASRTCSDTGYTB ---------------GGGACWGCACAT-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 73 Combined Motif Original Motif Original Motif DGTDGBGCTGGMGRTKGGASHGCACATCSDTGYTB CAAACTGCAAG DGTDGBGCTGGMGRTCRAACTGCAMRTCSDTGYTB Direction: Forward Position #: 16 Overlap #: 11 Alignment: DGTDGBGCTGGMGRTKGGASHGCACATCSDTGYTB ---------------CAAACTGCAAG--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 272 Combined Motif Reverse Complement Reverse Complement VAMCADSGAMYTGCAGTTKGAMCYCCAGCBCDACD GTGACAGCTG VAMCADSGAMYTGCAGTGDCASCTSCAGCBCDACD Direction: Forward Position #: 16 Overlap #: 10 Alignment: VAMCADSGAMYTGCAGTTKGAMCYCCAGCBCDACD ---------------GTGACAGCTG---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 152 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 152 Motif 357 Reverse Complement Reverse Complement TTATTTTA TAATTTTATGTGTCAACTTG TWATTTTATGTGTCAACTTG Direction: Forward Position #: 1 Overlap #: 8 Alignment: TTATTTTA------------ TAATTTTATGTGTCAACTTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 103 Combined Motif Original Motif Reverse Complement TWATTTTATGTGTCAACTTG TTATTTCACTT TWATTTTATKWKTYMACTTG Direction: Forward Position #: 9 Overlap #: 11 Alignment: TWATTTTATGTGTCAACTTG --------TTATTTCACTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 195 Combined Motif Reverse Complement Original Motif CAAGTYMAYWRATAAAATWA TAAAAGACTACAWATTGGGT CAAGTYMATAAAWRAMWWYAWATTGGGT Direction: Forward Position #: 9 Overlap #: 12 Alignment: CAAGTYMAYWRATAAAATWA-------- --------TAAAAGACTACAWATTGGGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 233 Combined Motif Reverse Complement Original Motif ACCCAATWTKWWRTKWTTTATYMACTTG GTTAACTGTAAAACAGCCT ACCCAATWTKWWGTTAWYTRTHAAMYWGCCT Direction: Forward Position #: 13 Overlap #: 16 Alignment: ACCCAATWTKWWRTKWTTTATYMACTTG--- ------------GTTAACTGTAAAACAGCCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 328 Combined Motif Reverse Complement Original Motif AGGCWMYTTHAMAKWTAACWWYAWATTGGGT GATACAAAATCAATGTR AGGCWMYTTHAMAGATAMMAAAWCAWTGKRT Direction: Forward Position #: 14 Overlap #: 17 Alignment: AGGCWMYTTHAMAKWTAACWWYAWATTGGGT -------------GATACAAAATCAATGTR- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 7 Combined Motif Reverse Complement Original Motif AMRCAWTGWTTTYYTATCTRTHAAMYWGCCT GTCTCWAMAAAAAAWAMAAA AMRCAWTGWTTTYBTMTCWAWAAAAHARMCWAA Direction: Forward Position #: 14 Overlap #: 18 Alignment: AMRCAWTGWTTTYYTATCTRTHAAMYWGCCT-- -------------GTCTCWAMAAAAAAWAMAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 102 Combined Motif Original Motif Original Motif AMRCAWTGWTTTYBTMTCWAWAAAAHARMCWAA CTCATTTAATCCTCACAAC AMRCAWTGWTTTYBYYYMTWTAAWMHWBACAAM Direction: Forward Position #: 15 Overlap #: 19 Alignment: AMRCAWTGWTTTYBTMTCWAWAAAAHARMCWAA --------------CTCATTTAATCCTCACAAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 356 Combined Motif Reverse Complement Original Motif YTTGTBWDRWTTAWAYKMMBMAAAWCAWTGKRT AATTAAAAGACACAGACTG YTTGTBWDRWTTAWAATTAAAARAYAMAKRBKK Direction: Forward Position #: 15 Overlap #: 19 Alignment: YTTGTBWDRWTTAWAYKMMBMAAAWCAWTGKRT --------------AATTAAAAGACACAGACTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 41 Combined Motif Original Motif Original Motif YTTGTBWDRWTTAWAATTAAAARAYAMAKRBKK AAAYAAAAAAA YTTGTBWDRWTTAWAAWTAAAAAAAAMAKRBKK Direction: Forward Position #: 15 Overlap #: 11 Alignment: YTTGTBWDRWTTAWAATTAAAARAYAMAKRBKK --------------AAAYAAAAAAA-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 287 Combined Motif Reverse Complement Reverse Complement RRBKYTYTTTTTTTTAWTTWTAAWMHWBACAAM CAMTTAGCATAATG RRBKYTYTTTTTTTYAHTTAKMATAATGACAAM Direction: Forward Position #: 15 Overlap #: 14 Alignment: RRBKYTYTTTTTTTTAWTTWTAAWMHWBACAAM --------------CAMTTAGCATAATG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 129 Combined Motif Reverse Complement Reverse Complement YTTGTCATTATYYTAAHTKAAAAAAAMAKRBKK TGAGKCAATTAAACCTCTT YTTGTCATTATYYTWRAKKMAAWWAAAMBWCTT Direction: Forward Position #: 15 Overlap #: 19 Alignment: YTTGTCATTATYYTAAHTKAAAAAAAMAKRBKK --------------TGAGKCAATTAAACCTCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 24 Combined Motif Original Motif Original Motif YTTGTCATTATYYTWRAKKMAAWWAAAMBWCTT CKAGTCAAAGAAA YTTGTCATTATYYTYKAGTCAAAKAAAMBWCTT Direction: Forward Position #: 15 Overlap #: 13 Alignment: YTTGTCATTATYYTWRAKKMAAWWAAAMBWCTT --------------CKAGTCAAAGAAA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 329 Combined Motif Reverse Complement Reverse Complement AAGWBRTTTYTTTGACTYKAKMATAATGACAAM GCTAATATATCCCTCCC AAGWBRTTTYTTTGRCTAAWATATCMYTMCMAM Direction: Forward Position #: 15 Overlap #: 17 Alignment: AAGWBRTTTYTTTGACTYKAKMATAATGACAAM --------------GCTAATATATCCCTCCC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 54 Combined Motif Reverse Complement Original Motif YTRGRAKRGATATWTTAGMCAAAKAAAMBWCTT AAGGAAAAGAAA YTRGRAKRGATATWWWRGMMAADRAAAMBWCTT Direction: Forward Position #: 15 Overlap #: 12 Alignment: YTRGRAKRGATATWTTAGMCAAAKAAAMBWCTT --------------AAGGAAAAGAAA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 55 Combined Motif Original Motif Original Motif YTRGRAKRGATATWWWRGMMAADRAAAMBWCTT ATGGAATAYTATTCAGCCAT YTRGRAKRGATATWATRGAAWABTAWWCVGCYWT Direction: Forward Position #: 15 Overlap #: 19 Alignment: YTRGRAKRGATATWWWRGMMAADRAAAMBWCTT- --------------ATGGAATAYTATTCAGCCAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 255 Combined Motif Reverse Complement Reverse Complement AWKGCBGWWTABTWTTCMATWATATCMYTMCMAM TTTGTTATAGCAG AWKGCBGWWTABTWTTYYRTTATAKCABTMCMAM Direction: Forward Position #: 16 Overlap #: 13 Alignment: AWKGCBGWWTABTWTTCMATWATATCMYTMCMAM ---------------TTTGTTATAGCAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 99 Combined Motif Reverse Complement Original Motif YTRGRABTGYTATAAMMMAAWABTAWWCVGCYWT GCAAAKGACATGATYTCATT YTRGRABTGYTATAAVCAAADRAYATDMWBYYATT Direction: Forward Position #: 16 Overlap #: 19 Alignment: YTRGRABTGYTATAAMMMAAWABTAWWCVGCYWT- ---------------GCAAAKGACATGATYTCATT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 130 Combined Motif Reverse Complement Original Motif AATKMVWYHATKTKDTTTGVTTATAKCABTMCMAM ATTATTATYAT AATKMVWYHATKTKDWTTRTTWWTATCABTMCMAM Direction: Forward Position #: 16 Overlap #: 11 Alignment: AATKMVWYHATKTKDTTTGVTTATAKCABTMCMAM ---------------ATTATTATYAT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 270 Combined Motif Original Motif Reverse Complement AATKMVWYHATKTKDWTTRTTWWTATCABTMCMAM CCTMACAATCATGG AATKMVWYHATKTKDHYTVAYAATMWYRGTMCMAM Direction: Forward Position #: 16 Overlap #: 14 Alignment: AATKMVWYHATKTKDWTTRTTWWTATCABTMCMAM ---------------CCTMACAATCATGG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 21 Combined Motif Reverse Complement Reverse Complement YTRGRACMMWRATTKTBAKDDRAYATDMWBYYATT KACGGGCTTAARAAACGGC YTRGRACMMWRATTKKAMGGGCWTAWRAAACSGYT Direction: Forward Position #: 16 Overlap #: 19 Alignment: YTRGRACMMWRATTKTBAKDDRAYATDMWBYYATT ---------------KACGGGCTTAARAAACGGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 14 Combined Motif Reverse Complement Original Motif AKCSGTTTKWTAWGCCCYTRYAATMWYRGTMCMAM ACCTGGAAAATCGGGTCACT AKCSGTTTKWTAWGCMCCTGGAAWATYGGGYCAMT Direction: Forward Position #: 16 Overlap #: 20 Alignment: AKCSGTTTKWTAWGCCCYTRYAATMWYRGTMCMAM ---------------ACCTGGAAAATCGGGTCACT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 173 Combined Motif Reverse Complement Original Motif ARTGMCCCKATWTTCCAGGYGCWTAWRAAACSGYT AAGGAAACAA ARTGMCCCKATWTTCMAGGWAAHWAWRAAACSGYT Direction: Forward Position #: 16 Overlap #: 10 Alignment: ARTGMCCCKATWTTCCAGGYGCWTAWRAAACSGYT ---------------AAGGAAACAA---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 70 Combined Motif Reverse Complement Original Motif AKCSGTTTKWTWDTTWCCTYGAAWATYGGGYCAMT CTATTGTGAATARTGCTGC AKCSGTTTKWTWDTTYYMTTGWRAATMRKGCYRCT Direction: Forward Position #: 16 Overlap #: 19 Alignment: AKCSGTTTKWTWDTTWCCTYGAAWATYGGGYCAMT ---------------CTATTGTGAATARTGCTGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 281 Combined Motif Reverse Complement Original Motif AGMMGCRMYATTKWCAAYMKAAHWAWRAAACSGYT AAATGGAATCAT AGMMGCRMYATTKWCAAHWGRAATMADAAACSGYT Direction: Forward Position #: 16 Overlap #: 12 Alignment: AGMMGCRMYATTKWCAAYMKAAHWAWRAAACSGYT ---------------AAATGGAATCAT-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 363 Combined Motif Reverse Complement Original Motif AKCSGTTTDTRATTMCWHTTGWRAATMRKGCYRCT CAAGGTCTGATTGTW AKCSGTTTDTRATTMCAAKKKCWRATTGTKCYRCT Direction: Forward Position #: 16 Overlap #: 15 Alignment: AKCSGTTTDTRATTMCWHTTGWRAATMRKGCYRCT ---------------CAAGGTCTGATTGTW----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 57 Combined Motif Original Motif Original Motif AKCSGTTTDTRATTMCAAKKKCWRATTGTKCYRCT AAATATTTATT AKCSGTTTDTRATTMMAATATTTAWTTGTKCYRCT Direction: Forward Position #: 16 Overlap #: 11 Alignment: AKCSGTTTDTRATTMCAAKKKCWRATTGTKCYRCT ---------------AAATATTTATT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 317 Combined Motif Original Motif Reverse Complement AKCSGTTTDTRATTMMAATATTTAWTTGTKCYRCT ATGTTGTAGCATGT AKCSGTTTDTRATTMAWRTTKTWRMWTGTKCYRCT Direction: Forward Position #: 16 Overlap #: 14 Alignment: AKCSGTTTDTRATTMMAATATTTAWTTGTKCYRCT ---------------ATGTTGTAGCATGT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 333 Combined Motif Reverse Complement Original Motif AGMMGRACAWRMWAYAAMWTRAATMADAAACSGYT TAGATAATAGCTCCAGCTTT AGMMGRACAWRMWAYTASATAATWVMTMMASCBTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: AGMMGRACAWRMWAYAAMWTRAATMADAAACSGYT ---------------TAGATAATAGCTCCAGCTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 280 Combined Motif Reverse Complement Reverse Complement AAVGSTRRARVWATTATSTAKTWRMWTGTKCYRCT ACATCMTCTGAAATCTAGG AAVGSTRRARVWATTAYATMVTMKVAWRTBTAGST Direction: Forward Position #: 16 Overlap #: 19 Alignment: AAVGSTRRARVWATTATSTAKTWRMWTGTKCYRCT ---------------ACATCMTCTGAAATCTAGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 349 Combined Motif Original Motif Reverse Complement AAVGSTRRARVWATTAYATMVTMKVAWRTBTAGST TTCAMTCATGATTTGGCTCT AAVGSTRRARVWATTWYMWMTYATGATTTGKCKST Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAVGSTRRARVWATTAYATMVTMKVAWRTBTAGST ---------------TTCAMTCATGATTTGGCTCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 327 Combined Motif Reverse Complement Original Motif ASRGYCAAATCATKARWRMWAATWVMTMMASCBTT AGGAGGAAGTCAATTTC ASRGYCAAATCATKAADGADGAARTCWATWTCBTT Direction: Forward Position #: 16 Overlap #: 17 Alignment: ASRGYCAAATCATKARWRMWAATWVMTMMASCBTT ---------------AGGAGGAAGTCAATTTC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 137 Combined Motif Reverse Complement Reverse Complement AAVGAWATWGAMTTCHTCHTTYATGATTTGKCKST TWTACCTATGTAACAAACCT AAVGAWATWGAMTTCTWYAYYTATGWWAYRAABCT Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAVGAWATWGAMTTCHTCHTTYATGATTTGKCKST ---------------TWTACCTATGTAACAAACCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 193 Combined Motif Reverse Complement Reverse Complement AGBTTKKTWWCATAKKTMWAGAARTCWATWTCBTT GKCTGTACCCCCATTGTAT AGBTTKKTWWCATAKGTCTRKAHVYCMATTKYDTT Direction: Forward Position #: 16 Overlap #: 19 Alignment: AGBTTKKTWWCATAKKTMWAGAARTCWATWTCBTT ---------------GKCTGTACCCCCATTGTAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 342 Combined Motif Original Motif Original Motif AGBTTKKTWWCATAKGTCTRKAHVYCMATTKYDTT GCCTATTAAAC AGBTTKKTWWCATAKGYCTATWAAACMATTKYDTT Direction: Forward Position #: 16 Overlap #: 11 Alignment: AGBTTKKTWWCATAKGTCTRKAHVYCMATTKYDTT ---------------GCCTATTAAAC--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 145 Combined Motif Original Motif Original Motif AGBTTKKTWWCATAKGYCTATWAAACMATTKYDTT GCCAGTCACAAAARGACAMA AGBTTKKTWWCATAKGCCWRTHACAMAADKDCAHW Direction: Forward Position #: 16 Overlap #: 20 Alignment: AGBTTKKTWWCATAKGYCTATWAAACMATTKYDTT ---------------GCCAGTCACAAAARGACAMA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 213 Combined Motif Original Motif Original Motif AGBTTKKTWWCATAKGCCWRTHACAMAADKDCAHW AAYRGACTAATACA AGBTTKKTWWCATAKRMCAGWCWAABAMAKDCAHW Direction: Forward Position #: 16 Overlap #: 14 Alignment: AGBTTKKTWWCATAKGCCWRTHACAMAADKDCAHW ---------------AAYRGACTAATACA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 310 Combined Motif Reverse Complement Original Motif WHTGHYTRTVTTWGWCTGYKYTATGWWAYRAABCT CCCATGCAAGTCYRAAATCC WHTGHYTRTVTTWGWCYSATGYAWGTMHBAAAYCY Direction: Forward Position #: 16 Overlap #: 20 Alignment: WHTGHYTRTVTTWGWCTGYKYTATGWWAYRAABCT ---------------CCCATGCAAGTCYRAAATCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 216 Combined Motif Original Motif Original Motif WHTGHYTRTVTTWGWCYSATGYAWGTMHBAAAYCY CAGAAATCACC WHTGHYTRTVTTWGWCAGAWRYMASYMHBAAAYCY Direction: Forward Position #: 16 Overlap #: 11 Alignment: WHTGHYTRTVTTWGWCYSATGYAWGTMHBAAAYCY ---------------CAGAAATCACC--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 117 Combined Motif Original Motif Original Motif WHTGHYTRTVTTWGWCAGAWRYMASYMHBAAAYCY AACAACAACAACAAMAA WHTGHYTRTVTTWGWMASAACWAMAACAAAAAYCY Direction: Forward Position #: 16 Overlap #: 17 Alignment: WHTGHYTRTVTTWGWCAGAWRYMASYMHBAAAYCY ---------------AACAACAACAACAAMAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 308 Combined Motif Reverse Complement Original Motif KGMTTTTTGTTRTWGTTSTYWCWAABAMAKDCAHW AAATTAGGCCAATTAATAAC KGMTTTTTGTTRTWGWWRTTASDMMAAYWAAYAAH Direction: Forward Position #: 16 Overlap #: 20 Alignment: KGMTTTTTGTTRTWGTTSTYWCWAABAMAKDCAHW ---------------AAATTAGGCCAATTAATAAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 168 Combined Motif Reverse Complement Original Motif DTTMTTWMTTRRHSTAAKWWCWAMAACAAAAAYCY AGGTATTTCTCCCACC DTTMTTWMTTRRHSTARGTAYTWCWCCHAMMAYCY Direction: Forward Position #: 16 Overlap #: 16 Alignment: DTTMTTWMTTRRHSTAAKWWCWAMAACAAAAAYCY ---------------AGGTATTTCTCCCACC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 19 Combined Motif Original Motif Reverse Complement DTTMTTWMTTRRHSTARGTAYTWCWCCHAMMAYCY MGGGATATAATCTCCTGGTG DTTMTTWMTTRRHSTMGGKATWTMAYCTMCTRKYG Direction: Forward Position #: 16 Overlap #: 20 Alignment: DTTMTTWMTTRRHSTARGTAYTWCWCCHAMMAYCY ---------------MGGGATATAATCTCCTGGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 190 Combined Motif Original Motif Reverse Complement DTTMTTWMTTRRHSTMGGKATWTMAYCTMCTRKYG ATCATTCTTATGCCTTTG DTTMTTWMTTRRHSTAKSAWTMTWATSYCYTKGYG Direction: Forward Position #: 16 Overlap #: 18 Alignment: DTTMTTWMTTRRHSTMGGKATWTMAYCTMCTRKYG ---------------ATCATTCTTATGCCTTTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 319 Combined Motif Original Motif Original Motif DTTMTTWMTTRRHSTAKSAWTMTWATSYCYTKGYG TAGTTTTTAACAA DTTMTTWMTTRRHSTWAGTTTYTAAYVMCYTKGYG Direction: Forward Position #: 16 Overlap #: 13 Alignment: DTTMTTWMTTRRHSTAKSAWTMTWATSYCYTKGYG ---------------TAGTTTTTAACAA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 119 Combined Motif Original Motif Original Motif DTTMTTWMTTRRHSTWAGTTTYTAAYVMCYTKGYG AAGTCCAAGATCAAGGTGYY DTTMTTWMTTRRHSTAAGTYYWWRAYCAMDKTGYB Direction: Forward Position #: 16 Overlap #: 20 Alignment: DTTMTTWMTTRRHSTWAGTTTYTAAYVMCYTKGYG ---------------AAGTCCAAGATCAAGGTGYY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 172 Combined Motif Original Motif Original Motif DTTMTTWMTTRRHSTAAGTYYWWRAYCAMDKTGYB AGAAACAGAA DTTMTTWMTTRRHSTARRWAYARAAYCAMDKTGYB Direction: Forward Position #: 16 Overlap #: 10 Alignment: DTTMTTWMTTRRHSTAAGTYYWWRAYCAMDKTGYB ---------------AGAAACAGAA---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 242 Combined Motif Original Motif Original Motif DTTMTTWMTTRRHSTARRWAYARAAYCAMDKTGYB AACCCTATTGTGAACTGYG DTTMTTWMTTRRHSTAACHCYATWRTSAACTKBBB Direction: Forward Position #: 16 Overlap #: 19 Alignment: DTTMTTWMTTRRHSTARRWAYARAAYCAMDKTGYB ---------------AACCCTATTGTGAACTGYG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 261 Combined Motif Original Motif Original Motif DTTMTTWMTTRRHSTAACHCYATWRTSAACTKBBB ATCTCASAAATCACCACTA DTTMTTWMTTRRHSTAWCTCWVAAATCAMCWSTAB Direction: Forward Position #: 16 Overlap #: 19 Alignment: DTTMTTWMTTRRHSTAACHCYATWRTSAACTKBBB ---------------ATCTCASAAATCACCACTA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 262 Combined Motif Reverse Complement Reverse Complement BTASWGRTGATTTBWGAGWTASDMMAAYWAAYAAH GACAGGAGATTAACACTGAG BTASWGRTGATTTBWGASAKRVGAYWAAYAMTRAG Direction: Forward Position #: 16 Overlap #: 20 Alignment: BTASWGRTGATTTBWGAGWTASDMMAAYWAAYAAH ---------------GACAGGAGATTAACACTGAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 169 Combined Motif Original Motif Original Motif BTASWGRTGATTTBWGASAKRVGAYWAAYAMTRAG CCCAAATCCTATAAAA BTASWGRTGATTTBWSMCAAAWSMTAWAAAATRAG Direction: Forward Position #: 16 Overlap #: 16 Alignment: BTASWGRTGATTTBWGASAKRVGAYWAAYAMTRAG ---------------CCCAAATCCTATAAAA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 146 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 146 Motif 1 Reverse Complement Original Motif GGGGTGACAG GGGGTGACAGABGB KGRSWGACRGGGGG Direction: Backward Position #: 1 Overlap #: 10 Alignment: ----GGGGTGACAG GGGGTGACAGABGB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 209 Combined Motif Original Motif Reverse Complement KGRSWGACRGGGGG ATGGGCTGACAG KGRSWRWSRGSKGRCAG Direction: Forward Position #: 6 Overlap #: 9 Alignment: KGRSWGACRGGGGG--- -----ATGGGCTGACAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 279 Combined Motif Original Motif Original Motif KGRSWRWSRGSKGRCAG GGGGGAGACATCACACR KGRSWRDGGGGAGACAKCACACR Direction: Forward Position #: 7 Overlap #: 11 Alignment: KGRSWRWSRGSKGRCAG------ ------GGGGGAGACATCACACR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 193 Combined Motif Original Motif Reverse Complement KGRSWRDGGGGAGACAKCACACR GKCTGTACCCCCATTGTAT KGRSWRDGGGKHKRYABCMCMMKTGTAT Direction: Forward Position #: 10 Overlap #: 14 Alignment: KGRSWRDGGGGAGACAKCACACR----- ---------GKCTGTACCCCCATTGTAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 205 Combined Motif Reverse Complement Reverse Complement ATACARYYGYGVTKMRDYCCCHKWSMCR TGGGCTGCCAGATG ATACARYYGYGVTGVGCTSCCAGATVCR Direction: Forward Position #: 13 Overlap #: 14 Alignment: ATACARYYGYGVTKMRDYCCCHKWSMCR ------------TGGGCTGCCAGATG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 358 Combined Motif Reverse Complement Original Motif KGVATCTGGSAGCVCABCMCMMKTGTAT CGTCCATCACCCC KGVATCTGGSAGCGYMCMTCACYYSTAT Direction: Forward Position #: 13 Overlap #: 13 Alignment: KGVATCTGGSAGCVCABCMCMMKTGTAT ------------CGTCCATCACCCC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 92 Combined Motif Original Motif Original Motif KGVATCTGGSAGCGYMCMTCACYYSTAT GGGGGCTGACCCCCCCACC KGVATCTGGSAGSGKSSCTSACCCCYMYACC Direction: Forward Position #: 13 Overlap #: 16 Alignment: KGVATCTGGSAGCGYMCMTCACYYSTAT--- ------------GGGGGCTGACCCCCCCACC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 29 Combined Motif Original Motif Reverse Complement KGVATCTGGSAGSGKSSCTSACCCCYMYACC MGTCTMKCTCTGTKGCCCAG KGVATCTGGSAGSRGKCYHGMYCYSTHBMCCAG Direction: Forward Position #: 14 Overlap #: 18 Alignment: KGVATCTGGSAGSGKSSCTSACCCCYMYACC-- -------------MGTCTMKCTCTGTKGCCCAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 4 Combined Motif Original Motif Original Motif KGVATCTGGSAGSRGKCYHGMYCYSTHBMCCAG GCTGGGATTACAGG KGVATCTGGSAGSRGCYBDGATYHCWGGMCCAG Direction: Forward Position #: 15 Overlap #: 14 Alignment: KGVATCTGGSAGSRGKCYHGMYCYSTHBMCCAG --------------GCTGGGATTACAGG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 312 Combined Motif Reverse Complement Reverse Complement CTGGRCCWGHMATCHBMGCMSCTSCCAGATVCR CCCMKGGCACCCTCAGTCCT CTGGRCCWGHMATCCCCVSGGCWCCCWSAKDCVT Direction: Forward Position #: 15 Overlap #: 19 Alignment: CTGGRCCWGHMATCHBMGCMSCTSCCAGATVCR- --------------CCCMKGGCACCCTCAGTCCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 174 Combined Motif Reverse Complement Original Motif AVGDYTSWGGGWGCCSVGGGGATYHCWGGMCCAG GGGGTGAVCAGAT AVGDYTSWGGGWGCCGGGGKGABCASAKGMCCAG Direction: Forward Position #: 16 Overlap #: 13 Alignment: AVGDYTSWGGGWGCCSVGGGGATYHCWGGMCCAG ---------------GGGGTGAVCAGAT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 293 Combined Motif Original Motif Reverse Complement AVGDYTSWGGGWGCCGGGGKGABCASAKGMCCAG GGGAGGTGTCTCCCAGTCAG AVGDYTSWGGGWGCCGGGRKGWGYMKMYCASYMRG Direction: Forward Position #: 16 Overlap #: 19 Alignment: AVGDYTSWGGGWGCCGGGGKGABCASAKGMCCAG- ---------------GGGAGGTGTCTCCCAGTCAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 178 Combined Motif Original Motif Reverse Complement AVGDYTSWGGGWGCCGGGRKGWGYMKMYCASYMRG ATGTGGAGGTGGAAGACAGT AVGDYTSWGGGWGCCRKGTGGAGKYKVMMRVCAGK Direction: Forward Position #: 16 Overlap #: 20 Alignment: AVGDYTSWGGGWGCCGGGRKGWGYMKMYCASYMRG ---------------ATGTGGAGGTGGAAGACAGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 245 Combined Motif Reverse Complement Original Motif YCTGBMYYVYMYCTCCACYKGGCWCCCWSAKDCVT CAGACTGCCTCCTCAA YCTGBMYYVYMYCTCCASHCKGCCYCCTCARDCVT Direction: Forward Position #: 16 Overlap #: 16 Alignment: YCTGBMYYVYMYCTCCACYKGGCWCCCWSAKDCVT ---------------CAGACTGCCTCCTCAA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 133 Combined Motif Original Motif Original Motif YCTGBMYYVYMYCTCCASHCKGCCYCCTCARDCVT CTGYGTCCCCA YCTGBMYYVYMYCTCCWGHGTSCCCMCTCARDCVT Direction: Forward Position #: 16 Overlap #: 11 Alignment: YCTGBMYYVYMYCTCCASHCKGCCYCCTCARDCVT ---------------CTGYGTCCCCA--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 105 Combined Motif Original Motif Original Motif YCTGBMYYVYMYCTCCWGHGTSCCCMCTCARDCVT GCCTCTCCCTCCACACCTCC YCTGBMYYVYMYCTCSCSTCTCCCYCCWCACCYCY Direction: Forward Position #: 16 Overlap #: 20 Alignment: YCTGBMYYVYMYCTCCWGHGTSCCCMCTCARDCVT ---------------GCCTCTCCCTCCACACCTCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 221 Combined Motif Original Motif Reverse Complement YCTGBMYYVYMYCTCSCSTCTCCCYCCWCACCYCY GTGTCCCCTTCCTCCC YSTGTCCCCTTCCTCCCSTCTCCCYCCWCACCYCY Direction: Forward Position #: 2 Overlap #: 16 Alignment: YCTGBMYYVYMYCTCSCSTCTCCCYCCWCACCYCY -GTGTCCCCTTCCTCCC------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 225 Combined Motif Original Motif Original Motif YSTGTCCCCTTCCTCCCSTCTCCCYCCWCACCYCY GCACATGTAYCCYAGAACTT YSTGTCCCCTTCCTCSCMYMTSYMYCCHMRAMCYT Direction: Forward Position #: 16 Overlap #: 20 Alignment: YSTGTCCCCTTCCTCCCSTCTCCCYCCWCACCYCY ---------------GCACATGTAYCCYAGAACTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 326 Combined Motif Reverse Complement Reverse Complement AMGYTKRHGGMYMSAYKYGSGAGGAAGGGGACASK CCTTTGACTCCATGTC AMGYTKRHGGMYMSAHSTKYGASKMMRKGKMCASK Direction: Forward Position #: 16 Overlap #: 16 Alignment: AMGYTKRHGGMYMSAYKYGSGAGGAAGGGGACASK ---------------CCTTTGACTCCATGTC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 84 Combined Motif Reverse Complement Original Motif YSTGRRCRKRRRSTCMRASDTSYMYCCHMRAMCYT CTGGGTCCCCCAGCAGTGCC YSTGRRCRKRRRSTCCWRGGTCCCCCMDCARTSCY Direction: Forward Position #: 16 Overlap #: 20 Alignment: YSTGRRCRKRRRSTCMRASDTSYMYCCHMRAMCYT ---------------CTGGGTCCCCCAGCAGTGCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 201 Combined Motif Original Motif Original Motif YSTGRRCRKRRRSTCCWRGGTCCCCCMDCARTSCY GTAACACTCACCGCGARGGT YSTGRRCRKRRRSTCSTARSWCYCMCCGCRADGST Direction: Forward Position #: 16 Overlap #: 20 Alignment: YSTGRRCRKRRRSTCCWRGGTCCCCCMDCARTSCY ---------------GTAACACTCACCGCGARGGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 135 Combined Motif Reverse Complement Original Motif ASCDTMGCGGYGMGWSKTASGASKMMRKGKMCASK CTCTTGTTGCCCAG ASCDTMGCGGYGMGWCTYWYGWYGCCMWGKMCASK Direction: Forward Position #: 16 Overlap #: 14 Alignment: ASCDTMGCGGYGMGWSKTASGASKMMRKGKMCASK ---------------CTCTTGTTGCCCAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 235 Combined Motif Reverse Complement Reverse Complement YSTGRRCWRGGCMWCMWKAGWCYCMCCGCRADGST GCCAATTTCTCCCATTTGGA YSTGRRCWRGGCMWCGMCARTYTCTCCSMDWTGGW Direction: Forward Position #: 16 Overlap #: 20 Alignment: YSTGRRCWRGGCMWCMWKAGWCYCMCCGCRADGST ---------------GCCAATTTCTCCCATTTGGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 316 Combined Motif Reverse Complement Original Motif WCCAWDYSGGAGAMAKTGRCGWYGCCMWGKMCASK CGGAAGTGACGT WCCAWDYSGGAGAMACKGAAGTGRCSHWGKMCASK Direction: Forward Position #: 16 Overlap #: 12 Alignment: WCCAWDYSGGAGAMAKTGRCGWYGCCMWGKMCASK ---------------CGGAAGTGACGT-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 336 Combined Motif Original Motif Reverse Complement WCCAWDYSGGAGAMACKGAAGTGRCSHWGKMCASK CAGGTGGTKTTTGGTTACAT WCCAWDYSGGAGAMACRGRWGKTRYKTRGTYMMAT Direction: Forward Position #: 16 Overlap #: 20 Alignment: WCCAWDYSGGAGAMACKGAAGTGRCSHWGKMCASK ---------------CAGGTGGTKTTTGGTTACAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 139 Combined Motif Reverse Complement Reverse Complement ATRYMACMARMMAYCWMCKGTYTCTCCSMDWTGGW AWTKKTGGTTKCCAGKGGCT ATRYMACMARMMAYCAMYKGTKKYTBCCAKKKGST Direction: Forward Position #: 16 Overlap #: 20 Alignment: ATRYMACMARMMAYCWMCKGTYTCTCCSMDWTGGW ---------------AWTKKTGGTTKCCAGKGGCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 292 Combined Motif Reverse Complement Original Motif ASCYRYTGGBAMYYACRKYTGKTRYKTRGTYMMAT AAGACCTTCCAGTGGGACAA ASCYRYTGGBAMYYAMAGAYSTTVCDKKGKBACAW Direction: Forward Position #: 16 Overlap #: 20 Alignment: ASCYRYTGGBAMYYACRKYTGKTRYKTRGTYMMAT ---------------AAGACCTTCCAGTGGGACAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 320 Combined Motif Original Motif Reverse Complement ASCYRYTGGBAMYYAMAGAYSTTVCDKKGKBACAW TGGGGCTCCAGATG ASCYRYTGGBAMYYAHRGRBCTYCMGATGKBACAW Direction: Forward Position #: 16 Overlap #: 14 Alignment: ASCYRYTGGBAMYYAMAGAYSTTVCDKKGKBACAW ---------------TGGGGCTCCAGATG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 284 Combined Motif Reverse Complement Reverse Complement WTGTBYCATCYGKAGBMCMHTKKYTBCCAKKKGST TCAATGGGCTCCCAAATG WTGTBYCATCYGKAGTCMATKGGCTCCCADATGST Direction: Forward Position #: 16 Overlap #: 18 Alignment: WTGTBYCATCYGKAGBMCMHTKKYTBCCAKKKGST ---------------TCAATGGGCTCCCAAATG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 307 Combined Motif Reverse Complement Reverse Complement ASCATDTGGGAGCCYATYGACTYCMGATGKBACAW AGAGCTCTGGCTGGCATCT ASCATDTGGGAGCCYAKWGMYYTSVSTKGSAWCWW Direction: Forward Position #: 16 Overlap #: 19 Alignment: ASCATDTGGGAGCCYATYGACTYCMGATGKBACAW ---------------AGAGCTCTGGCTGGCATCT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 357 Combined Motif Reverse Complement Original Motif WWGWTSCYASVSAKMRCWYTKGGCTCCCADATGST CAAGTTGACACATAAAATTA WWGWTSCYASVSAKMSMAGTTGRCWCMYAAAWKYW Direction: Forward Position #: 16 Overlap #: 20 Alignment: WWGWTSCYASVSAKMRCWYTKGGCTCCCADATGST ---------------CAAGTTGACACATAAAATTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 35 Combined Motif Reverse Complement Reverse Complement WMRWTTTKRGWGKCAACTYSYYTSVSTKGSAWCWW AAGACGGGTGATTTCTG WMRWTTTKRGWGKCAAAKWVKBKTGATTKCWKCWW Direction: Forward Position #: 16 Overlap #: 17 Alignment: WMRWTTTKRGWGKCAACTYSYYTSVSTKGSAWCWW ---------------AAGACGGGTGATTTCTG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 232 Combined Motif Original Motif Reverse Complement WMRWTTTKRGWGKCAAAKWVKBKTGATTKCWKCWW AAGTCTCCCAATTACAACT WMRWTTTKRGWGKCAAAGTCTCCCRATTWCAACTW Direction: Forward Position #: 16 Overlap #: 19 Alignment: WMRWTTTKRGWGKCAAAKWVKBKTGATTKCWKCWW ---------------AAGTCTCCCAATTACAACT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 215 Combined Motif Original Motif Original Motif WMRWTTTKRGWGKCAAAGTCTCCCRATTWCAACTW HGCTCCTGTGSKCCC WMRWTTTKRGWGKCAARSTCYHGYGMTYVCAACTW Direction: Forward Position #: 16 Overlap #: 15 Alignment: WMRWTTTKRGWGKCAAAGTCTCCCRATTWCAACTW ---------------HGCTCCTGTGSKCCC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 6 Combined Motif Reverse Complement Reverse Complement WAGTTGVMARCMCHKGASMTTGRCWCMYAAAWKYW GAGSTTGCAGTGAGC WAGTTGVMARCMCHKGAGSTTGMMDYVMRMAWKYW Direction: Forward Position #: 16 Overlap #: 15 Alignment: WAGTTGVMARCMCHKGASMTTGRCWCMYAAAWKYW ---------------GAGSTTGCAGTGAGC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 112 Combined Motif Reverse Complement Reverse Complement WMRWTRMYVMHYRCAASCTCYHGYGMTYVCAACTW CTTGCCCAAGGTCACACAGC WMRWTRMYVMHYRCAMKYKCCHVHGVTCACAMMKH Direction: Forward Position #: 16 Overlap #: 20 Alignment: WMRWTRMYVMHYRCAASCTCYHGYGMTYVCAACTW ---------------CTTGCCCAAGGTCACACAGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 122 Combined Motif Original Motif Original Motif WMRWTRMYVMHYRCAMKYKCCHVHGVTCACAMMKH CCTTGGCCAGCCCAGAAAG WMRWTRMYVMHYRCACCTTSSCCAGCYCASAAAGH Direction: Forward Position #: 16 Overlap #: 19 Alignment: WMRWTRMYVMHYRCAMKYKCCHVHGVTCACAMMKH ---------------CCTTGGCCAGCCCAGAAAG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 61 Combined Motif Reverse Complement Original Motif DCTTTSTGKGCTGGSSAAGGTGMMDYVMRMAWKYW GGATCCACTGGGTGAAGCCA DCTTTSTGKGCTGGSGRATSYRCTRGGTGAAGYCA Direction: Forward Position #: 16 Overlap #: 20 Alignment: DCTTTSTGKGCTGGSSAAGGTGMMDYVMRMAWKYW ---------------GGATCCACTGGGTGAAGCCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 329 Combined Motif Reverse Complement Reverse Complement TGKCTTCACCMAGKKSATMCSCCAGCYCASAAAGH GCTAATATATCCCTCCC TGKCTTCACCMAGKKGMTAMKMYAKCCCWCMMAGH Direction: Forward Position #: 16 Overlap #: 17 Alignment: TGKCTTCACCMAGKKSATMCSCCAGCYCASAAAGH ---------------GCTAATATATCCCTCCC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 32 Combined Motif Original Motif Original Motif TGKCTTCACCMAGKKGMTAMKMYAKCCCWCMMAGH ATGGTGAAACCC TGKCTTCACCMAGKKRYKRHGAAAYCCCWCMMAGH Direction: Forward Position #: 16 Overlap #: 12 Alignment: TGKCTTCACCMAGKKGMTAMKMYAKCCCWCMMAGH ---------------ATGGTGAAACCC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 108 Combined Motif Reverse Complement Reverse Complement DCTRRGWGGGKTTTCHMYMKYRCTRGGTGAAGYCA GCGCTCKTCGGGGAGGCTCG DCTRRGWGGGKTTTCGMBCTCDYHGGGKRRRSTCR Direction: Forward Position #: 16 Overlap #: 20 Alignment: DCTRRGWGGGKTTTCHMYMKYRCTRGGTGAAGYCA ---------------GCGCTCKTCGGGGAGGCTCG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 294 Combined Motif Original Motif Original Motif DCTRRGWGGGKTTTCGMBCTCDYHGGGKRRRSTCR AGCTGTGAGAAGAGGGCCAC DCTRRGWGGGKTTTCASCYKYGABRRGARGGCYMC Direction: Forward Position #: 16 Overlap #: 20 Alignment: DCTRRGWGGGKTTTCGMBCTCDYHGGGKRRRSTCR ---------------AGCTGTGAGAAGAGGGCCAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 168 Combined Motif Reverse Complement Original Motif GYKGCCMTCKKBTCMYMGSTGAAAYCCCWCMMAGH AGGTATTTCTCCCACC GYKGCCMTCKKBTCMMRGTWKWTMTCCCACCMAGH Direction: Forward Position #: 16 Overlap #: 16 Alignment: GYKGCCMTCKKBTCMYMGSTGAAAYCCCWCMMAGH ---------------AGGTATTTCTCCCACC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 98 Combined Motif Original Motif Reverse Complement GYKGCCMTCKKBTCMMRGTWKWTMTCCCACCMAGH CCCACGCCCACCCGGAACT GYKGCCMTCKKBTCMCCSAMKCYCWCCCRSMAMKH Direction: Forward Position #: 16 Overlap #: 19 Alignment: GYKGCCMTCKKBTCMMRGTWKWTMTCCCACCMAGH ---------------CCCACGCCCACCCGGAACT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 220 Combined Motif Reverse Complement Reverse Complement DRRTYSMGGGWGKGYRTSGGYGABRRGARGGCYMC GTGGGTGCAGTGCA DRRTYSMGGGWGKGYGTGGGTGCAGDGMAGGCYMC Direction: Forward Position #: 16 Overlap #: 14 Alignment: DRRTYSMGGGWGKGYRTSGGYGABRRGARGGCYMC ---------------GTGGGTGCAGTGCA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 261 Combined Motif Reverse Complement Original Motif GYKGCCTRCDCTGCACCCACKCYCWCCCRSMAMKH ATCTCASAAATCACCACTA GYKGCCTRCDCTGCAMYCWCRCMMAYCMVCAMYWH Direction: Forward Position #: 16 Overlap #: 19 Alignment: GYKGCCTRCDCTGCACCCACKCYCWCCCRSMAMKH ---------------ATCTCASAAATCACCACTA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 51 Combined Motif Reverse Complement Original Motif DWMRTGVYGMTYYGKGWGMYTGCAGDGMAGGCYMC GTGGGTGCGCGCA DWMRTGVYGMTYYGKGTGVKTGCRSGSAAGGCYMC Direction: Forward Position #: 16 Overlap #: 13 Alignment: DWMRTGVYGMTYYGKGWGMYTGCAGDGMAGGCYMC ---------------GTGGGTGCGCGCA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 241 Combined Motif Original Motif Reverse Complement DWMRTGVYGMTYYGKGTGVKTGCRSGSAAGGCYMC TCGTTCACTCAGTGC DWMRTGVYGMTYYGKKYGTTYRCKCRGWGSGCYMC Direction: Forward Position #: 16 Overlap #: 15 Alignment: DWMRTGVYGMTYYGKGTGVKTGCRSGSAAGGCYMC ---------------TCGTTCACTCAGTGC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 348 Combined Motif Original Motif Original Motif DWMRTGVYGMTYYGKKYGTTYRCKCRGWGSGCYMC ATGGCCTATGACYGSTTTG DWMRTGVYGMTYYGKATGGYCWMTSASYGSKYTRC Direction: Forward Position #: 16 Overlap #: 19 Alignment: DWMRTGVYGMTYYGKKYGTTYRCKCRGWGSGCYMC ---------------ATGGCCTATGACYGSTTTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 52 Combined Motif Original Motif Reverse Complement DWMRTGVYGMTYYGKATGGYCWMTSASYGSKYTRC GGTGGAGCTGCCTGCCAGTC DWMRTGVYGMTYYGKGKKGGMGCTGMCTGCBAKTC Direction: Forward Position #: 16 Overlap #: 20 Alignment: DWMRTGVYGMTYYGKATGGYCWMTSASYGSKYTRC ---------------GGTGGAGCTGCCTGCCAGTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 113 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 113 Motif 74 Reverse Complement Reverse Complement TAGGAAGTG CCATCTAGGAAGTG TAGGAAGTGCCATC Direction: Backward Position #: 1 Overlap #: 9 Alignment: -----TAGGAAGTG CCATCTAGGAAGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 153 Combined Motif Reverse Complement Original Motif GATGGCACTTCCTA CACTAGGGAGTGCC GATGGCACTWSSKAGTGCC Direction: Forward Position #: 6 Overlap #: 9 Alignment: GATGGCACTTCCTA----- -----CACTAGGGAGTGCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 156 Combined Motif Reverse Complement Reverse Complement GGCACTRSSWAGTGCCATC GTCTGGGAAGTG GGCACTRGYYWGKGMMRTS Direction: Forward Position #: 8 Overlap #: 12 Alignment: GGCACTRSSWAGTGCCATC -------GTCTGGGAAGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 27 Combined Motif Reverse Complement Original Motif SAMYYCYCWKMCKAGTGCC CACTTCCCAGACGGGGCG SAMYYCYCASHYCMSWGMCGGGGCG Direction: Forward Position #: 8 Overlap #: 12 Alignment: SAMYYCYCWKMCKAGTGCC------ -------CACTTCCCAGACGGGGCG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 339 Combined Motif Original Motif Original Motif SAMYYCYCASHYCMSWGMCGGGGCG CTCACCTCCTGC SAMYYCYCASCTCACHKCCKGSGCG Direction: Forward Position #: 11 Overlap #: 12 Alignment: SAMYYCYCASHYCMSWGMCGGGGCG ----------CTCACCTCCTGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 327 Combined Motif Reverse Complement Original Motif CGCSCRGGYDGTGAGSTGKGMMRTS AGGAGGAAGTCAATTTC CGCSCRGGYDRKGAGGWRGKCAATBTC Direction: Forward Position #: 11 Overlap #: 15 Alignment: CGCSCRGGYDGTGAGSTGKGMMRTS-- ----------AGGAGGAAGTCAATTTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 95 Combined Motif Reverse Complement Original Motif GAVATTGRCMWCCTCYKHKCCKGSGCG ACCCYGTCTGGGAGGTG GAVATTGRCMWMCYCYGTSYSGGRGSKG Direction: Forward Position #: 12 Overlap #: 16 Alignment: GAVATTGRCMWCCTCYKHKCCKGSGCG- -----------ACCCYGTCTGGGAGGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 221 Combined Motif Reverse Complement Reverse Complement CYSCKCCSMSACKGKGYWRGKCAATBTC GTGTCCCCTTCCTCCC CYSCKCCSMSACGKGKCMVSTYMMTCYC Direction: Forward Position #: 13 Overlap #: 16 Alignment: CYSCKCCSMSACKGKGYWRGKCAATBTC ------------GTGTCCCCTTCCTCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 169 Combined Motif Original Motif Reverse Complement CYSCKCCSMSACGKGKCMVSTYMMTCYC TTTTATAGGATTTGGG CYSCKCCSMSACKTKTMTAGKWYYTSBS Direction: Forward Position #: 13 Overlap #: 16 Alignment: CYSCKCCSMSACGKGKCMVSTYMMTCYC ------------TTTTATAGGATTTGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 45 Combined Motif Reverse Complement Reverse Complement SBSAMMWYCTAYARARGTSYSGGRGSKG CACTTTCCAGACTGGGCA SBSAMMWYCTAYMAMWKTCCAGRCKGGGCA Direction: Forward Position #: 13 Overlap #: 16 Alignment: SBSAMMWYCTAYARARGTSYSGGRGSKG-- ------------CACTTTCCAGACTGGGCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 344 Combined Motif Original Motif Reverse Complement SBSAMMWYCTAYMAMWKTCCAGRCKGGGCA GTCATCTCCTATG SBSAMMWYCTAYMRTYWTCYCSWATGGGCA Direction: Forward Position #: 14 Overlap #: 13 Alignment: SBSAMMWYCTAYMAMWKTCCAGRCKGGGCA -------------GTCATCTCCTATG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 15 Combined Motif Reverse Complement Reverse Complement TGCCCATWSGMGAWKAMRMTAGKWYYTSBS TCACKMGGGAAGCGCAAG TGCCCATWSGMGATCACKMKRGRAKHKCAAG Direction: Forward Position #: 14 Overlap #: 17 Alignment: TGCCCATWSGMGAWKAMRMTAGKWYYTSBS- -------------TCACKMGGGAAGCGCAAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 245 Combined Motif Original Motif Reverse Complement TGCCCATWSGMGATCACKMKRGRAKHKCAAG TTGAGGAGGCAGTCTG TGCCCATWSGMGATYRMGVAGGVAGTYYGAG Direction: Forward Position #: 14 Overlap #: 16 Alignment: TGCCCATWSGMGATCACKMKRGRAKHKCAAG -------------TTGAGGAGGCAGTCTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 136 Combined Motif Reverse Complement Original Motif CTCMKACTVCCTVCYMMATCYCSWATGGGCA CCCTCACTGCCCGGGG CTCMKACTVCCTVCCCWMWCTSCYMKGGGCA Direction: Forward Position #: 14 Overlap #: 16 Alignment: CTCMKACTVCCTVCYMMATCYCSWATGGGCA -------------CCCTCACTGCCCGGGG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 179 Combined Motif Original Motif Reverse Complement CTCMKACTVCCTVCCCWMWCTSCYMKGGGCA GAATACCTCCTGAAGGACCT CTCMKACTVCCTVSMMTAHCTCCTVARGGMMCT Direction: Forward Position #: 14 Overlap #: 18 Alignment: CTCMKACTVCCTVCCCWMWCTSCYMKGGGCA-- -------------GAATACCTCCTGAAGGACCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 202 Combined Motif Reverse Complement Original Motif AGYRCCKTVAGGAGDTAYRSVAGGVAGTYYGAG ACACATCACAAAGCAGTTTC AGYRCCKTVAGGAGAYAYATCASRAAGYHKKWKC Direction: Forward Position #: 15 Overlap #: 19 Alignment: AGYRCCKTVAGGAGDTAYRSVAGGVAGTYYGAG- --------------ACACATCACAAAGCAGTTTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 25 Combined Motif Reverse Complement Original Motif GYWRYHKCTTKSTGATKTKTCTCCTVARGGMMCT CATTTCCAWCTGAGGTAC GYWRYHKCTTKSTGAYRTTTCYMHCTGAGGYACT Direction: Forward Position #: 16 Overlap #: 18 Alignment: GYWRYHKCTTKSTGATKTKTCTCCTVARGGMMCT ---------------CATTTCCAWCTGAGGTAC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 235 Combined Motif Reverse Complement Original Motif AGTMCCTCAGDYKGAAAKKTCASRAAGYHKKWKC TCCAAATGGGAGAAATTGGC AGTMCCTCAGDYKGAWMBRWMWGGRAGMARTTGSC Direction: Forward Position #: 16 Overlap #: 19 Alignment: AGTMCCTCAGDYKGAAAKKTCASRAAGYHKKWKC- ---------------TCCAAATGGGAGAAATTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 308 Combined Motif Original Motif Original Motif AGTMCCTCAGDYKGAWMBRWMWGGRAGMARTTGSC AAATTAGGCCAATTAATAAC AGTMCCTCAGDYKGAAAHTTADGSSARWWAWTRAC Direction: Forward Position #: 16 Overlap #: 20 Alignment: AGTMCCTCAGDYKGAWMBRWMWGGRAGMARTTGSC ---------------AAATTAGGCCAATTAATAAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 165 Combined Motif Reverse Complement Original Motif GTKAWTWWMTSSCHTAAHTTTCYMHCTGAGGYACT ATCTGACAGGAGGYRGAGCT GTKAWTWWMTSSCHTATYTKWCHRGMGGHGGARCT Direction: Forward Position #: 16 Overlap #: 20 Alignment: GTKAWTWWMTSSCHTAAHTTTCYMHCTGAGGYACT ---------------ATCTGACAGGAGGYRGAGCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 214 Combined Motif Original Motif Reverse Complement GTKAWTWWMTSSCHTATYTKWCHRGMGGHGGARCT GGTTTTCCATTCCTGAG GTKAWTWWMTSSCHTRKTTTTCCATTSSTGRRRCT Direction: Forward Position #: 16 Overlap #: 17 Alignment: GTKAWTWWMTSSCHTATYTKWCHRGMGGHGGARCT ---------------GGTTTTCCATTCCTGAG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 246 Combined Motif Original Motif Original Motif GTKAWTWWMTSSCHTRKTTTTCCATTSSTGRRRCT GCAGCTTCACTCCTGA GTKAWTWWMTSSCHTGCWKYTYCAYTCCTGARRCT Direction: Forward Position #: 16 Overlap #: 16 Alignment: GTKAWTWWMTSSCHTRKTTTTCCATTSSTGRRRCT ---------------GCAGCTTCACTCCTGA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 232 Combined Motif Original Motif Reverse Complement GTKAWTWWMTSSCHTGCWKYTYCAYTCCTGARRCT AAGTCTCCCAATTACAACT GTKAWTWWMTSSCHTRADTCTCCMMWYYWSAACYT Direction: Forward Position #: 16 Overlap #: 19 Alignment: GTKAWTWWMTSSCHTGCWKYTYCAYTCCTGARRCT ---------------AAGTCTCCCAATTACAACT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 350 Combined Motif Reverse Complement Original Motif AMGTTSWMMWYRGGAGAHTKADGSSARWWAWTRAC TCTGGAGTGGACCTCCAGCA AMGTTSWMMWYRGGAKMTKGAGKGGAVYTMHWGCM Direction: Forward Position #: 16 Overlap #: 20 Alignment: AMGTTSWMMWYRGGAGAHTKADGSSARWWAWTRAC ---------------TCTGGAGTGGACCTCCAGCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 140 Combined Motif Original Motif Reverse Complement AMGTTSWMMWYRGGAKMTKGAGKGGAVYTMHWGCM GACTTCATGGAG AMGTTSWMMWYRGGAGACTKMRTGGAGYTMHWGCM Direction: Forward Position #: 16 Overlap #: 12 Alignment: AMGTTSWMMWYRGGAKMTKGAGKGGAVYTMHWGCM ---------------GACTTCATGGAG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 105 Combined Motif Original Motif Reverse Complement AMGTTSWMMWYRGGAGACTKMRTGGAGYTMHWGCM GGAGGTGTGGAGGGAGAGGC AMGTTSWMMWYRGGAGRMKGYGTGGAGSKAGAGSC Direction: Forward Position #: 16 Overlap #: 20 Alignment: AMGTTSWMMWYRGGAGACTKMRTGGAGYTMHWGCM ---------------GGAGGTGTGGAGGGAGAGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 242 Combined Motif Reverse Complement Reverse Complement GSCTCTYSCTCCACMCYYMCTCCMMWYYWSAACYT CMCAGTTCACAATAGGGTT GSCTCTYSCTCCACMCCCASTYCACAHTAGRRYTT Direction: Forward Position #: 16 Overlap #: 19 Alignment: GSCTCTYSCTCCACMCYYMCTCCMMWYYWSAACYT ---------------CMCAGTTCACAATAGGGTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 178 Combined Motif Original Motif Original Motif GSCTCTYSCTCCACMCCCASTYCACAHTAGRRYTT ACTGTCTTCCACCTCCACAT GSCTCTYSCTCCACMMCYRTYTYMCACYWSVAYWT Direction: Forward Position #: 16 Overlap #: 20 Alignment: GSCTCTYSCTCCACMCCCASTYCACAHTAGRRYTT ---------------ACTGTCTTCCACCTCCACAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 299 Combined Motif Original Motif Original Motif GSCTCTYSCTCCACMMCYRTYTYMCACYWSVAYWT CCCTGCTAGAACCTCCAA GSCTCTYSCTCCACMCCCKGCTHSMACCTCCAMWT Direction: Forward Position #: 16 Overlap #: 18 Alignment: GSCTCTYSCTCCACMMCYRTYTYMCACYWSVAYWT ---------------CCCTGCTAGAACCTCCAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 310 Combined Motif Original Motif Original Motif GSCTCTYSCTCCACMCCCKGCTHSMACCTCCAMWT CCCATGCAAGTCYRAAATCC GSCTCTYSCTCCACMCCCATSYAARWCYDMMAHCY Direction: Forward Position #: 16 Overlap #: 20 Alignment: GSCTCTYSCTCCACMCCCKGCTHSMACCTCCAMWT ---------------CCCATGCAAGTCYRAAATCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 294 Combined Motif Reverse Complement Original Motif MGHTYYDKGWMTTKSATGGGYGTGGAGSKAGAGSC AGCTGTGAGAAGAGGGCCAC MGHTYYDKGWMTTKSAKSKGTGWGRAGAGRGMSAC Direction: Forward Position #: 16 Overlap #: 20 Alignment: MGHTYYDKGWMTTKSATGGGYGTGGAGSKAGAGSC ---------------AGCTGTGAGAAGAGGGCCAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 330 Combined Motif Original Motif Original Motif MGHTYYDKGWMTTKSAKSKGTGWGRAGAGRGMSAC AAAACCAGCAAGTTTTTAT MGHTYYDKGWMTTKSAAAWSYRRSAAGWKDKTAWC Direction: Forward Position #: 16 Overlap #: 19 Alignment: MGHTYYDKGWMTTKSAKSKGTGWGRAGAGRGMSAC ---------------AAAACCAGCAAGTTTTTAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 249 Combined Motif Reverse Complement Original Motif GWTARDRWCTTSMKKSWTTTSYAARWCYDMMAHCY TGTGAAGAGACCACCAA GWTARDRWCTTSMKKTGTKWASAGAYCMCCAAHCY Direction: Forward Position #: 16 Overlap #: 17 Alignment: GWTARDRWCTTSMKKSWTTTSYAARWCYDMMAHCY ---------------TGTGAAGAGACCACCAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 311 Combined Motif Original Motif Reverse Complement GWTARDRWCTTSMKKTGTKWASAGAYCMCCAAHCY TTGGTAGGATCCGTGATGCC GWTARDRWCTTSMKKTKKGTAGRRWCCVTSAWDCC Direction: Forward Position #: 16 Overlap #: 20 Alignment: GWTARDRWCTTSMKKTGTKWASAGAYCMCCAAHCY ---------------TTGGTAGGATCCGTGATGCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 291 Combined Motif Reverse Complement Reverse Complement GGHWTSAVGGWKMCTACYRAYRRSAAGWKDKTAWC TAMGACCTCAGGTCCTCAG GGHWTSAVGGWKMCTWMCGACMTCARGTYCTCAGC Direction: Forward Position #: 16 Overlap #: 19 Alignment: GGHWTSAVGGWKMCTACYRAYRRSAAGWKDKTAWC ---------------TAMGACCTCAGGTCCTCAG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 13 Combined Motif Original Motif Original Motif GGHWTSAVGGWKMCTWMCGACMTCARGTYCTCAGC AAGCAGGGCGAGGCATTGCC GGHWTSAVGGWKMCTAASSASGGCRAGKCATYRSC Direction: Forward Position #: 16 Overlap #: 20 Alignment: GGHWTSAVGGWKMCTWMCGACMTCARGTYCTCAGC ---------------AAGCAGGGCGAGGCATTGCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 259 Combined Motif Reverse Complement Reverse Complement GSMMATGYCTMGCCSTSSTTAGRRWCCVTSAWDCC TAATAAGGGTGTGGG GSMMATGYCTMGCCSTAATWAGGGTSYGKGAWDCC Direction: Forward Position #: 16 Overlap #: 15 Alignment: GSMMATGYCTMGCCSTSSTTAGRRWCCVTSAWDCC ---------------TAATAAGGGTGTGGG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 30 Combined Motif Reverse Complement Reverse Complement GGHWTCYCMSACCCTWATTASGGCRAGKCATYRSC GCCGGGRAGAGGCGCTCCT GGHWTCYCMSACCCTKMBKRGRRSARGBSCTCCYC Direction: Forward Position #: 16 Overlap #: 19 Alignment: GGHWTCYCMSACCCTWATTASGGCRAGKCATYRSC ---------------GCCGGGRAGAGGCGCTCCT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 287 Combined Motif Reverse Complement Reverse Complement GMGGAGSBCMTSKMCMYBRYAGGGTSYGKGAWDCC CAMTTAGCATAATG GMGGAGSBCMTSKMCCMVKTAGSRTVWKGGAWDCC Direction: Forward Position #: 16 Overlap #: 14 Alignment: GMGGAGSBCMTSKMCMYBRYAGGGTSYGKGAWDCC ---------------CAMTTAGCATAATG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 247 Combined Motif Reverse Complement Reverse Complement GGHWTCCRWBAKSCTARVYGGRRSARGBSCTCCYC GKGGCAGTGAGGC GGHWTCCRWBAKSCTRKGGSRGTGAGGCSCTCCYC Direction: Forward Position #: 16 Overlap #: 13 Alignment: GGHWTCCRWBAKSCTARVYGGRRSARGBSCTCCYC ---------------GKGGCAGTGAGGC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 196 Combined Motif Reverse Complement Reverse Complement GMGGAGSGCCTCACKSCCRMAGSRTVWKGGAWDCC CAAGCCTSKGCAATGGCAGG GMGGAGSGCCTCACKCMMGCMKSDKCAAKGRHVSS Direction: Forward Position #: 16 Overlap #: 20 Alignment: GMGGAGSGCCTCACKSCCRMAGSRTVWKGGAWDCC ---------------CAAGCCTSKGCAATGGCAGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 43 Combined Motif Reverse Complement Original Motif SSBDMCRTTGYHSRRGCYYGRGTGAGGCSCTCCYC GCCAGGCAGAGRGKCTCCT SSBDMCRTTGYHSRRGCCHGGSWGAGGSBCTCCTC Direction: Forward Position #: 16 Overlap #: 19 Alignment: SSBDMCRTTGYHSRRGCYYGRGTGAGGCSCTCCYC ---------------GCCAGGCAGAGRGKCTCCT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 76 Combined Motif Reverse Complement Original Motif GAGGAGBSCCTCWSCCHGGCMKSDKCAAKGRHVSS GTGCCAGGCACTGTKCTARG GAGGAGBSCCTCWSCSTGSCAGGBDCWRTGVYAGG Direction: Forward Position #: 16 Overlap #: 20 Alignment: GAGGAGBSCCTCWSCCHGGCMKSDKCAAKGRHVSS ---------------GTGCCAGGCACTGTKCTARG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 271 Combined Motif Reverse Complement Reverse Complement CCTMVCAMWGDBCCTGSCASGSWGAGGSBCTCCTC KGCAACCTAGATCCCT CCTMVCAMWGDBCCTKGCAMSCTRRRKCCCTCCTC Direction: Forward Position #: 16 Overlap #: 16 Alignment: CCTMVCAMWGDBCCTGSCASGSWGAGGSBCTCCTC ---------------KGCAACCTAGATCCCT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 72 Combined Motif Original Motif Original Motif CCTMVCAMWGDBCCTKGCAMSCTRRRKCCCTCCTC CGCACTCCTCAGCC CCTMVCAMWGDBCCTSGCACYCYTSAGCCCTCCTC Direction: Forward Position #: 16 Overlap #: 14 Alignment: CCTMVCAMWGDBCCTKGCAMSCTRRRKCCCTCCTC ---------------CGCACTCCTCAGCC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 254 Combined Motif Reverse Complement Reverse Complement GAGGAGGGCTSAKGMGTGCSAGGBDCWRTGVYAGG ATAGGAATGCTTGTGATTTT GAGGAGGGCTSAKGMATRSGARKGCYWGTGATWKK Direction: Forward Position #: 16 Overlap #: 20 Alignment: GAGGAGGGCTSAKGMGTGCSAGGBDCWRTGVYAGG ---------------ATAGGAATGCTTGTGATTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 54 Combined Motif Original Motif Reverse Complement GAGGAGGGCTSAKGMATRSGARKGCYWGTGATWKK TTTCTTTTCCTT GAGGAGGGCTSAKGMWTDSKWWTSCTTGTGATWKK Direction: Forward Position #: 16 Overlap #: 12 Alignment: GAGGAGGGCTSAKGMATRSGARKGCYWGTGATWKK ---------------TTTCTTTTCCTT-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 16 Combined Motif Reverse Complement Original Motif RRWATCACAAGSAWWRSDAWYCYTSAGCCCTCCTC GAAAGGGAACTCCCTGACCC RRWATCACAAGSAWWGRAAGGSAACWSCCYKMCYC Direction: Forward Position #: 16 Overlap #: 20 Alignment: RRWATCACAAGSAWWRSDAWYCYTSAGCCCTCCTC ---------------GAAAGGGAACTCCCTGACCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 195 Combined Motif Reverse Complement Reverse Complement GKGYYMGGSWGTTSCCTTKCWWTSCTTGTGATWKK ACCCAATWTGTAGTCTTTTA GKGYYMGGSWGTTSCAYYYMATTYSTWGTSWTTTW Direction: Forward Position #: 16 Overlap #: 20 Alignment: GKGYYMGGSWGTTSCCTTKCWWTSCTTGTGATWKK ---------------ACCCAATWTGTAGTCTTTTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 21 Combined Motif Original Motif Original Motif GKGYYMGGSWGTTSCAYYYMATTYSTWGTSWTTTW GCCGTTTKTTAAGCCCGTY GKGYYMGGSWGTTSCRCCBTWTTTKWAGYCHKTYW Direction: Forward Position #: 16 Overlap #: 19 Alignment: GKGYYMGGSWGTTSCAYYYMATTYSTWGTSWTTTW ---------------GCCGTTTKTTAAGCCCGTY- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 71 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 71 Motif 304 Original Motif Reverse Complement AGCACTTTG AGCAGYTTGGAAACACT AGCASTTTGGAAACACT Direction: Forward Position #: 1 Overlap #: 9 Alignment: AGCACTTTG-------- AGCAGYTTGGAAACACT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 73 Combined Motif Original Motif Reverse Complement AGCASTTTGGAAACACT CTTGCAGTTTG AGCASTYTKGMARYWYK Direction: Forward Position #: 7 Overlap #: 11 Alignment: AGCASTTTGGAAACACT ------CTTGCAGTTTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 134 Combined Motif Reverse Complement Reverse Complement RKWKKTYCYAMASTGCT TGCAGTTTG RKWKKTTSCAVWBTGCT Direction: Forward Position #: 7 Overlap #: 9 Alignment: RKWKKTYCYAMASTGCT ------TGCAGTTTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 123 Combined Motif Original Motif Reverse Complement RKWKKTTSCAVWBTGCT CTCAGACTGCT RKWKKTYBCAGACTGCT Direction: Forward Position #: 7 Overlap #: 11 Alignment: RKWKKTTSCAVWBTGCT ------CTCAGACTGCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 202 Reverse Complement Original Motif AGCAGTCTGVKARYWYK ACACATCACAAAGCAGTTTC ACACATCASMARKCWGHTWVYWYK Direction: Forward Position #: 8 Overlap #: 13 Alignment: -------AGCAGTCTGVKARYWYK ACACATCACAAAGCAGTTTC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 284 Combined Motif Original Motif Original Motif ACACATCASMARKCWGHTWVYWYK CATTTGGGAGCCCATTGA ACACATCASMMATYTGDKASCHCWTTGA Direction: Forward Position #: 11 Overlap #: 14 Alignment: ACACATCASMARKCWGHTWVYWYK---- ----------CATTTGGGAGCCCATTGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 224 Combined Motif Reverse Complement Reverse Complement TCAAWGDGSTYHCAKATRRSTGATGTGT CAAAGTCTTAACTCATT TCAAWGDGSTYHCADAKTVTTRAYKYRTT Direction: Forward Position #: 13 Overlap #: 16 Alignment: TCAAWGDGSTYHCAKATRRSTGATGTGT- ------------CAAAGTCTTAACTCATT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 144 Combined Motif Original Motif Original Motif TCAAWGDGSTYHCADAKTVTTRAYKYRTT CCGCTGCACTGTGGGAGCCC TCAAWGDGSTYHCMGMTGCAYDRTGBGWKCCC Direction: Forward Position #: 13 Overlap #: 17 Alignment: TCAAWGDGSTYHCADAKTVTTRAYKYRTT--- ------------CCGCTGCACTGTGGGAGCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 119 Combined Motif Original Motif Reverse Complement TCAAWGDGSTYHCMGMTGCAYDRTGBGWKCCC KKCACCTTGATCTTGGACTT TCAAWGDGSTYHCMGBBRCMTTGWKSKTKSMCTT Direction: Forward Position #: 15 Overlap #: 18 Alignment: TCAAWGDGSTYHCMGMTGCAYDRTGBGWKCCC-- --------------KKCACCTTGATCTTGGACTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 70 Combined Motif Reverse Complement Reverse Complement AAGRSYARSRWCAARGKVBCRGDKASCHCWTTGA GCAGCAMTATTCACAATAG AAGRSYARSRWCAARGBAGCAVTDWKCACAWTRR Direction: Forward Position #: 16 Overlap #: 19 Alignment: AAGRSYARSRWCAARGKVBCRGDKASCHCWTTGA ---------------GCAGCAMTATTCACAATAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 120 Combined Motif Original Motif Original Motif AAGRSYARSRWCAARGBAGCAVTDWKCACAWTRR CCATGTGSTCCC AAGRSYARSRWCAARSCAKSWGBTYCCACAWTRR Direction: Forward Position #: 16 Overlap #: 12 Alignment: AAGRSYARSRWCAARGBAGCAVTDWKCACAWTRR ---------------CCATGTGSTCCC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 245 Combined Motif Original Motif Original Motif AAGRSYARSRWCAARSCAKSWGBTYCCACAWTRR CAGACTGCCTCCTCAA AAGRSYARSRWCAARCMRWCTGCYTCCWCAATRR Direction: Forward Position #: 16 Overlap #: 16 Alignment: AAGRSYARSRWCAARSCAKSWGBTYCCACAWTRR ---------------CAGACTGCCTCCTCAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 360 Combined Motif Original Motif Original Motif AAGRSYARSRWCAARCMRWCTGCYTCCWCAATRR CAATGGGGTG AAGRSYARSRCMAWGSRGTSTGCYTCCWCAATRR Direction: Forward Position #: 11 Overlap #: 10 Alignment: AAGRSYARSRWCAARCMRWCTGCYTCCWCAATRR ----------CAATGGGGTG-------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 228 Combined Motif Reverse Complement Original Motif KMATTGWGGAKGCASACMSCWTYGKSKTKSMCTT AGCTACTTG KMATTGWGGAGSYACWYGSCWTYGKSKTKSMCTT Direction: Forward Position #: 10 Overlap #: 9 Alignment: KMATTGWGGAKGCASACMSCWTYGKSKTKSMCTT ---------AGCTACTTG---------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 82 Combined Motif Reverse Complement Reverse Complement AAGRSYARSRCMAWGSCMWGTMSCTCCWCAATRR GCTGGCCCKGGTGCTAAGC AAGRSYARSRCMAWGGCTRGYCCBKSYKCWAWGV Direction: Forward Position #: 16 Overlap #: 19 Alignment: AAGRSYARSRCMAWGSCMWGTMSCTCCWCAATRR ---------------GCTGGCCCKGGTGCTAAGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 322 Combined Motif Reverse Complement Original Motif VCWTWGYMSYBGGKCMAGCCWTYGKSKTKSMCTT AGGGCCTTTGCASWTGC VCWTWGYMSYBGGKCARGSCCTTKGCABDBVCTT Direction: Forward Position #: 16 Overlap #: 17 Alignment: VCWTWGYMSYBGGKCMAGCCWTYGKSKTKSMCTT ---------------AGGGCCTTTGCASWTGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 348 Combined Motif Original Motif Original Motif VCWTWGYMSYBGGKCARGSCCTTKGCABDBVCTT ATGGCCTATGACYGSTTTG VCWTWGYMSYBGGKCATGGCCTWTGMMYGBDYTK Direction: Forward Position #: 16 Overlap #: 19 Alignment: VCWTWGYMSYBGGKCARGSCCTTKGCABDBVCTT ---------------ATGGCCTATGACYGSTTTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 190 Combined Motif Original Motif Reverse Complement VCWTWGYMSYBGGKCATGGCCTWTGMMYGBDYTK ATCATTCTTATGCCTTTG VCWTWGYMSYBGGKCATSRYYYTTRWGCSTTTKK Direction: Forward Position #: 16 Overlap #: 18 Alignment: VCWTWGYMSYBGGKCATGGCCTWTGMMYGBDYTK ---------------ATCATTCTTATGCCTTTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 114 Combined Motif Reverse Complement Reverse Complement YRAAASGCWKAAMMMKSATGYCCBKSYKCWAWGV GAGAACGTAG YRAAASGCWKRAVAACGWWGYCCBKSYKCWAWGV Direction: Forward Position #: 11 Overlap #: 10 Alignment: YRAAASGCWKAAMMMKSATGYCCBKSYKCWAWGV ----------GAGAACGTAG-------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 275 Combined Motif Original Motif Reverse Complement YRAAASGCWKRAVAACGWWGYCCBKSYKCWAWGV TTTAACTCTGTGAG YRAAASGCWKRAVAATKTARCYCTGKKASWAWGV Direction: Forward Position #: 16 Overlap #: 14 Alignment: YRAAASGCWKRAVAACGWWGYCCBKSYKCWAWGV ---------------TTTAACTCTGTGAG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 257 Combined Motif Original Motif Original Motif YRAAASGCWKRAVAATKTARCYCTGKKASWAWGV GAGAACACATGGACA YRAAASGCWKRAVAAKWKAACACWKGGACAAWGV Direction: Forward Position #: 16 Overlap #: 15 Alignment: YRAAASGCWKRAVAATKTARCYCTGKKASWAWGV ---------------GAGAACACATGGACA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 76 Combined Motif Original Motif Reverse Complement YRAAASGCWKRAVAAKWKAACACWKGGACAAWGV CMTAGYACAGTGCCTGGCAC YRAAASGCWKRAVAABMKARCACAKKGMCWRDSAC Direction: Forward Position #: 16 Overlap #: 19 Alignment: YRAAASGCWKRAVAAKWKAACACWKGGACAAWGV- ---------------CMTAGYACAGTGCCTGGCAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 11 Combined Motif Reverse Complement Reverse Complement GTSHMWGYCRYTGTGMTRYBTTVTMRWGCSTTTKK TGGACCTTGAG GTSHMWGYCRYTGTGHKGACYTTKAGWGCSTTTKK Direction: Forward Position #: 16 Overlap #: 11 Alignment: GTSHMWGYCRYTGTGMTRYBTTVTMRWGCSTTTKK ---------------TGGACCTTGAG--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 171 Combined Motif Original Motif Reverse Complement GTSHMWGYCRYTGTGHKGACYTTKAGWGCSTTTKK ACTTTGGACTGTGGACTTTT GTSHMWGYCRYTGTGABKTYSKABWGTGSAYTTTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: GTSHMWGYCRYTGTGHKGACYTTKAGWGCSTTTKK ---------------ACTTTGGACTGTGGACTTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 235 Combined Motif Reverse Complement Original Motif AAAAKTSCACWBTYSMARBTCACAKKGMCWRDSAC TCCAAATGGGAGAAATTGGC AAAAKTSCACWBTYSWMVAWMWSRGAGAMADTGRC Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAAAKTSCACWBTYSMARBTCACAKKGMCWRDSAC ---------------TCCAAATGGGAGAAATTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 262 Combined Motif Original Motif Reverse Complement AAAAKTSCACWBTYSWMVAWMWSRGAGAMADTGRC GACAGGAGATTAACACTGAG AAAAKTSCACWBTYSGMCARVAGAKTRACAYTGAS Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAAAKTSCACWBTYSWMVAWMWSRGAGAMADTGRC ---------------GACAGGAGATTAACACTGAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 307 Combined Motif Reverse Complement Original Motif STCAKTGTKARTCTVMTGYCSKABWGTGSAYTTTT AGATGCCAGCCAGAGCTCT STCAKTGTKARTCTVAKRTSCCAGCSWGARCTYTT Direction: Forward Position #: 16 Overlap #: 19 Alignment: STCAKTGTKARTCTVMTGYCSKABWGTGSAYTTTT ---------------AGATGCCAGCCAGAGCTCT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 18 Combined Motif Reverse Complement Original Motif AAKAGMTCWSGCTGGSAKYTVAGAKTRACAYTGAS GAAAAGCGCAGTATTMGGG AAKAGMTCWSGCTGGGAWAWGMGMWDTAYWMKGRS Direction: Forward Position #: 16 Overlap #: 19 Alignment: AAKAGMTCWSGCTGGSAKYTVAGAKTRACAYTGAS ---------------GAAAAGCGCAGTATTMGGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 128 Combined Motif Original Motif Reverse Complement AAKAGMTCWSGCTGGGAWAWGMGMWDTAYWMKGRS CMGCTCCGAGTGCGG AAKAGMTCWSGCTGGSAGCTSCGAGTGMKKMKGRS Direction: Forward Position #: 16 Overlap #: 15 Alignment: AAKAGMTCWSGCTGGGAWAWGMGMWDTAYWMKGRS ---------------CMGCTCCGAGTGCGG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 288 Combined Motif Original Motif Reverse Complement AAKAGMTCWSGCTGGSAGCTSCGAGTGMKKMKGRS GGGACTTGGG AAKAGMTCWSGCTGGSRGMYYYGRGTGMKKMKGRS Direction: Forward Position #: 16 Overlap #: 10 Alignment: AAKAGMTCWSGCTGGSAGCTSCGAGTGMKKMKGRS ---------------GGGACTTGGG---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 312 Combined Motif Original Motif Original Motif AAKAGMTCWSGCTGGSRGMYYYGRGTGMKKMKGRS AGGACTGAGGGTGCCYRGGG AAKAGMTCWSGCTGGRGGACTGRGGKKVCBYGGGG Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAKAGMTCWSGCTGGSRGMYYYGRGTGMKKMKGRS ---------------AGGACTGAGGGTGCCYRGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 93 Combined Motif Original Motif Reverse Complement AAKAGMTCWSGCTGGRGGACTGRGGKKVCBYGGGG CCGCACATGG AAKAGMTCWSGCTGGVSGMMYDTGGKKVCBYGGGG Direction: Forward Position #: 16 Overlap #: 10 Alignment: AAKAGMTCWSGCTGGRGGACTGRGGKKVCBYGGGG ---------------CCGCACATGG---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 83 Combined Motif Reverse Complement Reverse Complement CCCCKBGVRYCCADKYRCSVCCAGCSWGARCTYTT GTKTMTATMTACCACATTTT CCCCKBGVRYCCADKBKSKVYVWVYMMSAVMTTTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: CCCCKBGVRYCCADKYRCSVCCAGCSWGARCTYTT ---------------GTKTMTATMTACCACATTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 169 Combined Motif Reverse Complement Reverse Complement AAAAYVTSRYMVWBMBRSRBYDTGGKKVCBYGGGG TTTTATAGGATTTGGG AAAAYVTSRYMVWBMTDTTATAKGRTTDGGSGGGG Direction: Forward Position #: 16 Overlap #: 16 Alignment: AAAAYVTSRYMVWBMBRSRBYDTGGKKVCBYGGGG ---------------TTTTATAGGATTTGGG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 330 Combined Motif Reverse Complement Reverse Complement CCCCSCCDAAKCYTATAADAYVWVYMMSAVMTTTT ATAAAAACTTGCTGGTTTT CCCCSCCDAAKCYTAATAAAAACTTGCTRGTTTTT Direction: Forward Position #: 16 Overlap #: 19 Alignment: CCCCSCCDAAKCYTATAADAYVWVYMMSAVMTTTT ---------------ATAAAAACTTGCTGGTTTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 162 Combined Motif Original Motif Original Motif CCCCSCCDAAKCYTAATAAAAACTTGCTRGTTTTT ATGGACCTTG CCCCSCCDAAKCYTAATRRACMTTKGCTRGTTTTT Direction: Forward Position #: 16 Overlap #: 10 Alignment: CCCCSCCDAAKCYTAATAAAAACTTGCTRGTTTTT ---------------ATGGACCTTG---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 191 Combined Motif Original Motif Reverse Complement CCCCSCCDAAKCYTAATRRACMTTKGCTRGTTTTT GCTGCARTCTCGGCACTTT CCCCSCCDAAKCYTARYKGMAVTYTSSGSRCTTTT Direction: Forward Position #: 16 Overlap #: 19 Alignment: CCCCSCCDAAKCYTAATRRACMTTKGCTRGTTTTT ---------------GCTGCARTCTCGGCACTTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 234 Combined Motif Reverse Complement Reverse Complement AAAAGKSCSSAKABTRCRKMTAKGRTTDGGSGGGG GTGTCKGGAGTTTGTTCCTT AAAAGKSCSSAKABTGYGTCTRGRGTTTGKKSSKK Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAAAGKSCSSAKABTRCRKMTAKGRTTDGGSGGGG ---------------GTGTCKGGAGTTTGTTCCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 287 Combined Motif Original Motif Original Motif AAAAGKSCSSAKABTGYGTCTRGRGTTTGKKSSKK CATTATGCTAARTG AAAAGKSCSSAKABTSAKTMTGSWRWKTGKKSSKK Direction: Forward Position #: 16 Overlap #: 14 Alignment: AAAAGKSCSSAKABTGYGTCTRGRGTTTGKKSSKK ---------------CATTATGCTAARTG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 86 Combined Motif Reverse Complement Reverse Complement RRSSRRCARWKWSCAYARTSAVTYTSSGSRCTTTT VMATTTAKTGAGCACCTACT RRSSRRCARWKWSCAHMATBHATTKAGBMMCTWYT Direction: Forward Position #: 16 Overlap #: 20 Alignment: RRSSRRCARWKWSCAYARTSAVTYTSSGSRCTTTT ---------------VMATTTAKTGAGCACCTACT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 58 Combined Motif Reverse Complement Reverse Complement AMWAGRYBCTYAATHVATYHTGSWRWKTGKKSSKK GAAHCAACCKAAKTGTCCAT AMWAGRYBCTYAATHGAWHCWRCHDADTKKTCCWT Direction: Forward Position #: 16 Overlap #: 20 Alignment: AMWAGRYBCTYAATHVATYHTGSWRWKTGKKSSKK ---------------GAAHCAACCKAAKTGTCCAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 63 Combined Motif Original Motif Reverse Complement AMWAGRYBCTYAATHGAWHCWRCHDADTKKTCCWT AAAMAMMKMATGTTCTCACT AMWAGRYBCTYAATHAAAHMMMBMAWGTTSTCMHT Direction: Forward Position #: 16 Overlap #: 20 Alignment: AMWAGRYBCTYAATHGAWHCWRCHDADTKKTCCWT ---------------AAAMAMMKMATGTTCTCACT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 29 Combined Motif Original Motif Reverse Complement AMWAGRYBCTYAATHAAAHMMMBMAWGTTSTCMHT MGTCTMKCTCTGTKGCCCAG AMWAGRYBCTYAATHARWCWMDCTVTGTKSYCCAK Direction: Forward Position #: 16 Overlap #: 20 Alignment: AMWAGRYBCTYAATHAAAHMMMBMAWGTTSTCMHT ---------------MGTCTMKCTCTGTKGCCCAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 254 Combined Motif Original Motif Original Motif AMWAGRYBCTYAATHARWCWMDCTVTGTKSYCCAK AAAATCACAAGCATTCCTAT AMWAGRYBCTYAATHAAAMTCACWAKSWTTYCYAT Direction: Forward Position #: 16 Overlap #: 20 Alignment: AMWAGRYBCTYAATHARWCWMDCTVTGTKSYCCAK ---------------AAAATCACAAGCATTCCTAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 99 Combined Motif Original Motif Original Motif AMWAGRYBCTYAATHAAAMTCACWAKSWTTYCYAT GCAAAKGACATGATYTCATT AMWAGRYBCTYAATHRMAAWBRMYAKGATYTCHWT Direction: Forward Position #: 16 Overlap #: 20 Alignment: AMWAGRYBCTYAATHAAAMTCACWAKSWTTYCYAT ---------------GCAAAKGACATGATYTCATT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 253 Combined Motif Original Motif Reverse Complement AMWAGRYBCTYAATHRMAAWBRMYAKGATYTCHWT ACAGAGTGAGACTCT AMWAGRYBCTYAATHACARAGKVARWSWYTTCHWT Direction: Forward Position #: 16 Overlap #: 15 Alignment: AMWAGRYBCTYAATHRMAAWBRMYAKGATYTCHWT ---------------ACAGAGTGAGACTCT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 139 Combined Motif Reverse Complement Reverse Complement AWHGAAKWSWMTVYCTMTGTHATTKAGBMMCTWYT AWTKKTGGTTKCCAGKGGCT AWHGAAKWSWMTVYCWHTGKTRKTTDSCAGBKDCT Direction: Forward Position #: 16 Overlap #: 20 Alignment: AWHGAAKWSWMTVYCTMTGTHATTKAGBMMCTWYT ---------------AWTKKTGGTTKCCAGKGGCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 115 Combined Motif Original Motif Reverse Complement AWHGAAKWSWMTVYCWHTGKTRKTTDSCAGBKDCT HAGTGGKATTGCTGGATCAT AWHGAAKWSWMTVYCWAKKKKGRTTGCYRGHTBMT Direction: Forward Position #: 16 Overlap #: 20 Alignment: AWHGAAKWSWMTVYCWHTGKTRKTTDSCAGBKDCT ---------------HAGTGGKATTGCTGGATCAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 85 Combined Motif Reverse Complement Original Motif AYBAHCMMGCAAKCYYRRTWGKVARWSWYTTCHWT CTAGACATAAAGGTTCTCCA AYBAHCMMGCAAKCYCWAKASATAAAGDYTYYCCW Direction: Forward Position #: 16 Overlap #: 20 Alignment: AYBAHCMMGCAAKCYYRRTWGKVARWSWYTTCHWT ---------------CTAGACATAAAGGTTCTCCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 100 Combined Motif Reverse Complement Reverse Complement WGGMKAMHCTTTATSTYTWGKGRTTGCYRGHTBMT CGCGGCGCTTGCGGGCCAGC WGGMKAMHCTTTATSYBYDGBGCTTGCKGGCYARY Direction: Forward Position #: 16 Overlap #: 20 Alignment: WGGMKAMHCTTTATSTYTWGKGRTTGCYRGHTBMT ---------------CGCGGCGCTTGCGGGCCAGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 130 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 130 Motif 190 Original Motif Reverse Complement ATTATTATYAT ATCATTCTTATGCCTTTG ATYATTMTTATGCCTTTG Direction: Forward Position #: 1 Overlap #: 11 Alignment: ATTATTATYAT------- ATCATTCTTATGCCTTTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 270 Combined Motif Original Motif Original Motif ATYATTMTTATGCCTTTG CCATGATTGTRAGG ATYATTMYYATGMYTKTGAGG Direction: Forward Position #: 8 Overlap #: 11 Alignment: ATYATTMTTATGCCTTTG--- -------CCATGATTGTRAGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 70 Combined Motif Reverse Complement Original Motif CCTCARAMYCATKKYAATKAT CTATTGTGAATARTGCTGC CCTCARAMCYATTGTRAWTADTGCTGC Direction: Forward Position #: 9 Overlap #: 13 Alignment: CCTCARAMYCATKKYAATKAT------ --------CTATTGTGAATARTGCTGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 287 Combined Motif Reverse Complement Original Motif GCAGCADTAWTKACAATKGYTKTGAGG CATTATGCTAARTG GCAGCADTAWTBAYWATGSTWDKKRGG Direction: Forward Position #: 12 Overlap #: 14 Alignment: GCAGCADTAWTKACAATKGYTKTGAGG -----------CATTATGCTAARTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 55 Combined Motif Original Motif Reverse Complement GCAGCADTAWTBAYWATGSTWDKKRGG ATGGCTGAATAKTATTCCAT GCAGCADTAWTHWKGMTGVWTAKTAKKCCAT Direction: Forward Position #: 12 Overlap #: 16 Alignment: GCAGCADTAWTBAYWATGSTWDKKRGG---- -----------ATGGCTGAATAKTATTCCAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 184 Combined Motif Reverse Complement Reverse Complement ATGGRYTARTAWBCAYCYWHAWTADTGCTGC GGTCAGGATCATCAATAT ATGGRYTARTAWBSRTCAKBATYATYRMTRY Direction: Forward Position #: 14 Overlap #: 18 Alignment: ATGGRYTARTAWBCAYCYWHAWTADTGCTGC -------------GGTCAGGATCATCAATAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 254 Combined Motif Reverse Complement Reverse Complement MKARKKATKATBYTGAMSVWTAKTAKKCCAT ATAGGAATGCTTGTGATTTT MKARKKATKATBYWKAVGAATRBTWGTSMWTTT Direction: Forward Position #: 14 Overlap #: 18 Alignment: MKARKKATKATBYTGAMSVWTAKTAKKCCAT-- -------------ATAGGAATGCTTGTGATTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 7 Combined Motif Reverse Complement Reverse Complement AAAWYSACWABMATTCVTRWKBATYATYRMTRY TTTYTWTTTTTTYTWGAGAC AAAWYSACWABMATTYTTWWTTWTTWTTDVWGWC Direction: Forward Position #: 15 Overlap #: 19 Alignment: AAAWYSACWABMATTCVTRWKBATYATYRMTRY- --------------TTTYTWTTTTTTYTWGAGAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 262 Combined Motif Original Motif Original Motif AAAWYSACWABMATTYTTWWTTWTTWTTDVWGWC CTCAGTGTTAATCTCCTGTC AAAWYSACWABMATTCTYAKTKTTWATYTCHKDYC Direction: Forward Position #: 16 Overlap #: 19 Alignment: AAAWYSACWABMATTYTTWWTTWTTWTTDVWGWC- ---------------CTCAGTGTTAATCTCCTGTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 117 Combined Motif Reverse Complement Reverse Complement GMHRDGAKATWAAYAYTKAGAATRBTWGTSMWTTT TTYTTGTTGTTGTTGTT GMHRDGAKATWAAYAYTBWKRWTGTTRKTGHTTTT Direction: Forward Position #: 16 Overlap #: 17 Alignment: GMHRDGAKATWAAYAYTKAGAATRBTWGTSMWTTT ---------------TTYTTGTTGTTGTTGTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 102 Combined Motif Reverse Complement Original Motif AAAAHCARMAACAWMRWVAMTKTTWATYTCHKDYC CTCATTTAATCCTCACAAC AAAAHCARMAACAWMVTCAWTKWWTMYYYMCDRYC Direction: Forward Position #: 16 Overlap #: 19 Alignment: AAAAHCARMAACAWMRWVAMTKTTWATYTCHKDYC ---------------CTCATTTAATCCTCACAAC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 281 Combined Motif Original Motif Reverse Complement AAAAHCARMAACAWMVTCAWTKWWTMYYYMCDRYC ATGATTCCATTT AAAAHCARMAACAWMATGATTYMATTTYYMCDRYC Direction: Forward Position #: 16 Overlap #: 12 Alignment: AAAAHCARMAACAWMVTCAWTKWWTMYYYMCDRYC ---------------ATGATTCCATTT-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 354 Combined Motif Reverse Complement Reverse Complement GKKDGYMMAAATRKAATCATRWTGTTRKTGHTTTT GTCTTTATCAGC GKKDGYMMAAATRKARTCWTTATVWKVKTGHTTTT Direction: Forward Position #: 16 Overlap #: 12 Alignment: GKKDGYMMAAATRKAATCATRWTGTTRKTGHTTTT ---------------GTCTTTATCAGC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 150 Combined Motif Original Motif Original Motif GKKDGYMMAAATRKARTCWTTATVWKVKTGHTTTT ATTGCTAGCACA GKKDGYMMAAATRKAATYKYTAKCABAKTGHTTTT Direction: Forward Position #: 16 Overlap #: 12 Alignment: GKKDGYMMAAATRKARTCWTTATVWKVKTGHTTTT ---------------ATTGCTAGCACA-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 106 Combined Motif Reverse Complement Reverse Complement AAAAHCARTBTGYTAKYMATTYMATTTYYMCDRYC GGGATTGTAAATACACCAAT AAAAHCARTBTGYTAGGVATTGTAWWTHCACCAAY Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAAAHCARTBTGYTAKYMATTYMATTTYYMCDRYC ---------------GGGATTGTAAATACACCAAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 308 Combined Motif Reverse Complement Reverse Complement KTTGGTGHAWWTACAATVCCTAKCABAKTGHTTTT GTTATTAATTGGCCTAATTT KTTGGTGHAWWTACARTTMYTADYWGRYYKAWTTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: KTTGGTGHAWWTACAATVCCTAKCABAKTGHTTTT ---------------GTTATTAATTGGCCTAATTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 242 Combined Motif Reverse Complement Reverse Complement AAAWTRKKMCWMDTAMYAAMTGTAWWTHCACCAAY CMCAGTTCACAATAGGGTT AAAWTRKKMCWMDTAMHMAVTKYAMAWTMRSGWTY Direction: Forward Position #: 16 Overlap #: 19 Alignment: AAAWTRKKMCWMDTAMYAAMTGTAWWTHCACCAAY ---------------CMCAGTTCACAATAGGGTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 58 Combined Motif Reverse Complement Original Motif KAWCSMYAWTRTKRAVTRDRTADYWGRYYKAWTTT ATGGACAYTTRGGTTGHTTC KAWCSMYAWTRTKRAVTGGRYAHTTRGGTTRWTTY Direction: Forward Position #: 16 Overlap #: 20 Alignment: KAWCSMYAWTRTKRAVTRDRTADYWGRYYKAWTTT ---------------ATGGACAYTTRGGTTGHTTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 333 Combined Motif Reverse Complement Original Motif MAAWMAACCMAAHTMKCCABTKYAMAWTMRSGWTY TAGATAATAGCTCCAGCTTT MAAWMAACCMAAHTMTMSATWWTASMTYCAGCTTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: MAAWMAACCMAAHTMKCCABTKYAMAWTMRSGWTY ---------------TAGATAATAGCTCCAGCTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 303 Combined Motif Reverse Complement Reverse Complement AAAGCTGKARSTAWWATSYAYAHTTRGGTTRWTTY ACCATCTTTAAGAACT AAAGCTGKARSTAWWAYCWWCWTTWAGAHYTWTTY Direction: Forward Position #: 16 Overlap #: 16 Alignment: AAAGCTGKARSTAWWATSYAYAHTTRGGTTRWTTY ---------------ACCATCTTTAAGAACT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 255 Combined Motif Reverse Complement Reverse Complement MAAWAKHTCTWAAWGWWGMTWWTASMTYCAGCTTT TTTGTTATAGCAG MAAWAKHTCTWAAWGTTKRTTATAGCWSCAGCTTT Direction: Forward Position #: 16 Overlap #: 13 Alignment: MAAWAKHTCTWAAWGWWGMTWWTASMTYCAGCTTT ---------------TTTGTTATAGCAG------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 356 Combined Motif Reverse Complement Reverse Complement AAAGCTGSWGCTATAAMRAACWTTWAGAHYTWTTY CAGTCTGTGTCTTTTAATT AAAGCTGSWGCTATAMAGWMYDTKWMKWTTAATTY Direction: Forward Position #: 16 Overlap #: 19 Alignment: AAAGCTGSWGCTATAAMRAACWTTWAGAHYTWTTY ---------------CAGTCTGTGTCTTTTAATT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 319 Combined Motif Reverse Complement Original Motif MAATTAAWRRWYAHMRWCTRTATAGCWSCAGCTTT TAGTTTTTAACAA MAATTAAWRRWYAHMTASTKTWTARCAVCAGCTTT Direction: Forward Position #: 16 Overlap #: 13 Alignment: MAATTAAWRRWYAHMRWCTRTATAGCWSCAGCTTT ---------------TAGTTTTTAACAA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 346 Combined Motif Original Motif Original Motif MAATTAAWRRWYAHMTASTKTWTARCAVCAGCTTT AAATCTTAAAGCTC MAATTAAWRRWYAHMAAATBTTWAASMTCAGCTTT Direction: Forward Position #: 16 Overlap #: 14 Alignment: MAATTAAWRRWYAHMTASTKTWTARCAVCAGCTTT ---------------AAATCTTAAAGCTC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 227 Combined Motif Reverse Complement Original Motif AAAGCTGARSTTWAABATTTYDTKWMKWTTAATTY CCCAAATCTCATSTTGAAT AAAGCTGARSTTWAABMYWAWTYTYATBTTRAWTY Direction: Forward Position #: 16 Overlap #: 19 Alignment: AAAGCTGARSTTWAABATTTYDTKWMKWTTAATTY ---------------CCCAAATCTCATSTTGAAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 213 Combined Motif Reverse Complement Original Motif MAWTMAABATKAKAWTWKRBTTWAASMTCAGCTTT AAYRGACTAATACA MAWTMAABATKAKAWAABRGWYTAABAYMAGCTTT Direction: Forward Position #: 16 Overlap #: 14 Alignment: MAWTMAABATKAKAWTWKRBTTWAASMTCAGCTTT ---------------AAYRGACTAATACA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 99 Combined Motif Original Motif Reverse Complement MAWTMAABATKAKAWAABRGWYTAABAYMAGCTTT AATGAKATCATGTCYTTTGC MAWTMAABATKAKAWAATGRDHTMATRTCHKYTKY Direction: Forward Position #: 16 Overlap #: 20 Alignment: MAWTMAABATKAKAWAABRGWYTAABAYMAGCTTT ---------------AATGAKATCATGTCYTTTGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 126 Combined Motif Original Motif Original Motif MAWTMAABATKAKAWAATGRDHTMATRTCHKYTKY AYGCCTGTAATC MAWTMAABATKAKAWAWKSVTVTAATCTCHKYTKY Direction: Forward Position #: 16 Overlap #: 12 Alignment: MAWTMAABATKAKAWAATGRDHTMATRTCHKYTKY ---------------AYGCCTGTAATC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 328 Combined Motif Reverse Complement Reverse Complement KYAMRHGAGATTAVAVSYWTWTYTYATBTTRAWTY KACATTGATTTTGTATC KYAMRHGAGATTAVAKACATTKMTTWTGTWTMWTY Direction: Forward Position #: 16 Overlap #: 17 Alignment: KYAMRHGAGATTAVAVSYWTWTYTYATBTTRAWTY ---------------KACATTGATTTTGTATC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 80 Combined Motif Reverse Complement Original Motif MAWRAWACAWAAYYAATGTYTVTAATCTCHKYTKY WTTTTWAAAAW MAWRAWACAWAAYYAATKTTWAWAATCTCHKYTKY Direction: Forward Position #: 16 Overlap #: 11 Alignment: MAWRAWACAWAAYYAATGTYTVTAATCTCHKYTKY ---------------WTTTTWAAAAW--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 63 Combined Motif Original Motif Original Motif MAWRAWACAWAAYYAATKTTWAWAATCTCHKYTKY AGTGAGAACATRYRRTRTTT MAWRAWACAWAAYYAAKTKWKAAMATVYVVTDTTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: MAWRAWACAWAAYYAATKTTWAWAATCTCHKYTKY ---------------AGTGAGAACATRYRRTRTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 194 Combined Motif Original Motif Reverse Complement MAWRAWACAWAAYYAAKTKWKAAMATVYVVTDTTT CAGCTACTCKTATACCCTTG MAWRAWACAWAAYYAMAKSTAMWMDTATACYCTTK Direction: Forward Position #: 16 Overlap #: 20 Alignment: MAWRAWACAWAAYYAAKTKWKAAMATVYVVTDTTT ---------------CAGCTACTCKTATACCCTTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 137 Combined Motif Original Motif Original Motif MAWRAWACAWAAYYAMAKSTAMWMDTATACYCTTK AGGTTTGTTACATAGGTAWA MAWRAWACAWAAYYAARGTTWVTYAYATASSYWTD Direction: Forward Position #: 16 Overlap #: 20 Alignment: MAWRAWACAWAAYYAMAKSTAMWMDTATACYCTTK ---------------AGGTTTGTTACATAGGTAWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 18 Combined Motif Reverse Complement Reverse Complement DAWMSSTATMTMAVWAACMTTKMTTWTGTWTMWTY CCCYAATACTGCGCTTTTC DAWMSSTATMTMAVWMCCYWWTAYTGYGYTTTTYY Direction: Forward Position #: 16 Overlap #: 19 Alignment: DAWMSSTATMTMAVWAACMTTKMTTWTGTWTMWTY ---------------CCCYAATACTGCGCTTTTC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 154 Combined Motif Original Motif Reverse Complement DAWMSSTATMTMAVWMCCYWWTAYTGYGYTTTTYY TCCTATGAGAATCTAATG DAWMSSTATMTMAVWHCCTAWKAGWATSTWWTKYY Direction: Forward Position #: 16 Overlap #: 18 Alignment: DAWMSSTATMTMAVWMCCYWWTAYTGYGYTTTTYY ---------------TCCTATGAGAATCTAATG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 363 Combined Motif Original Motif Reverse Complement DAWMSSTATMTMAVWHCCTAWKAGWATSTWWTKYY WACAATCAGACCTTG DAWMSSTATMTMAVWWMCWATSAGAMYYTRWTKYY Direction: Forward Position #: 16 Overlap #: 15 Alignment: DAWMSSTATMTMAVWHCCTAWKAGWATSTWWTKYY ---------------WACAATCAGACCTTG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 195 Combined Motif Reverse Complement Original Motif MKYAWMAMKRTCTSATWGRWWVTYAYATASSYWTD TAAAAGACTACAWATTGGGT MKYAWMAMKRTCTSATARAADAYTACATABDKDKT Direction: Forward Position #: 16 Overlap #: 20 Alignment: MKYAWMAMKRTCTSATWGRWWVTYAYATASSYWTD ---------------TAAAAGACTACAWATTGGGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 169 Combined Motif Reverse Complement Reverse Complement AYHYDVTATGTAKTHTTKTATSAGAMYYTRWTKYY TTTTATAGGATTTGGG AYHYDVTATGTAKTHTTTTATARGATTTKGRTKYY Direction: Forward Position #: 16 Overlap #: 16 Alignment: AYHYDVTATGTAKTHTTKTATSAGAMYYTRWTKYY ---------------TTTTATAGGATTTGGG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 347 Combined Motif Original Motif Reverse Complement AYHYDVTATGTAKTHTTTTATARGATTTKGRTKYY GTGTGCGAATAGGTGT AYHYDVTATGTAKTHKTKTRYGARWAKKTGTTKYY Direction: Forward Position #: 16 Overlap #: 16 Alignment: AYHYDVTATGTAKTHTTTTATARGATTTKGRTKYY ---------------GTGTGCGAATAGGTGT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 349 Combined Motif Original Motif Reverse Complement AYHYDVTATGTAKTHKTKTRYGARWAKKTGTTKYY TTCAMTCATGATTTGGCTCT AYHYDVTATGTAKTHTTBWVTSAWKATTTGGYTCT Direction: Forward Position #: 16 Overlap #: 20 Alignment: AYHYDVTATGTAKTHKTKTRYGARWAKKTGTTKYY ---------------TTCAMTCATGATTTGGCTCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 357 Combined Motif Reverse Complement Original Motif AGAKCCAAATYWTSABWBAADAYTACATABDKDKT CAAGTTGACACATAAAATTA AGAKCCAAATYWTSACAARWTRAYACATADWRTTW Direction: Forward Position #: 16 Overlap #: 20 Alignment: AGAKCCAAATYWTSABWBAADAYTACATABDKDKT ---------------CAAGTTGACACATAAAATTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 261 Combined Motif Reverse Complement Reverse Complement WAAKWDTATGTKTMAWKTTGTSAWKATTTGGYTCT TAGTGGTGATTTSTGAGAT WAAKWDTATGTKTMATDGTGKYRATWTKTGRSWYT Direction: Forward Position #: 16 Overlap #: 19 Alignment: WAAKWDTATGTKTMAWKTTGTSAWKATTTGGYTCT ---------------TAGTGGTGATTTSTGAGAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 294 Combined Motif Original Motif Original Motif WAAKWDTATGTKTMATDGTGKYRATWTKTGRSWYT AGCTGTGAGAAGAGGGCCAC WAAKWDTATGTKTMAWGSTGTGARAAKAKGRCHWY Direction: Forward Position #: 16 Overlap #: 20 Alignment: WAAKWDTATGTKTMATDGTGKYRATWTKTGRSWYT ---------------AGCTGTGAGAAGAGGGCCAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 235 Combined Motif Reverse Complement Reverse Complement KWDGMCRTYTTMTCACASCWTRAYACATADWRTTW GCCAATTTCTCCCATTTGGA KWDGMCRTYTTMTCASMCMWTKTCWCMYATTTKKA Direction: Forward Position #: 16 Overlap #: 20 Alignment: KWDGMCRTYTTMTCACASCWTRAYACATADWRTTW ---------------GCCAATTTCTCCCATTTGGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 268 Combined Motif Original Motif Reverse Complement KWDGMCRTYTTMTCASMCMWTKTCWCMYATTTKKA GGTCTCACTAT KWDGMCRTYTTMTCAGGYCTYDYYAYMYATTTKKA Direction: Forward Position #: 16 Overlap #: 11 Alignment: KWDGMCRTYTTMTCASMCMWTKTCWCMYATTTKKA ---------------GGTCTCACTAT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 54 Combined Motif Reverse Complement Original Motif TYYAAATKRMTMKDKAGMCCTGARAAKAKGRCHWY AAGGAAAAGAAA TYYAAATKRMTMKDKARRSMWDAGAARAKGRCHWY Direction: Forward Position #: 16 Overlap #: 12 Alignment: TYYAAATKRMTMKDKAGMCCTGARAAKAKGRCHWY ---------------AAGGAAAAGAAA-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 145 Combined Motif Original Motif Original Motif TYYAAATKRMTMKDKARRSMWDAGAARAKGRCHWY GCCAGTCACAAAARGACAMA TYYAAATKRMTMKDKRMCAGWCASAAAAKGRCAAH Direction: Forward Position #: 16 Overlap #: 20 Alignment: TYYAAATKRMTMKDKARRSMWDAGAARAKGRCHWY ---------------GCCAGTCACAAAARGACAMA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 81 Combined Motif Original Motif Reverse Complement TYYAAATKRMTMKDKRMCAGWCASAAAAKGRCAAH ATTTTACAGATG TYYAAATKRMTMKDKAHYWKACAGAWRAKGRCAAH Direction: Forward Position #: 16 Overlap #: 12 Alignment: TYYAAATKRMTMKDKRMCAGWCASAAAAKGRCAAH ---------------ATTTTACAGATG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 280 Combined Motif Original Motif Original Motif TYYAAATKRMTMKDKAHYWKACAGAWRAKGRCAAH CCTAGATTTCAGARGATGT TYYAAATKRMTMKDKMCTAGAYWKMAGARGAYRWH Direction: Forward Position #: 16 Overlap #: 19 Alignment: TYYAAATKRMTMKDKAHYWKACAGAWRAKGRCAAH ---------------CCTAGATTTCAGARGATGT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 330 Combined Motif Reverse Complement Reverse Complement HWMMTCMTCTRRWMTCTAGRYDYYAYMYATTTKKA ATAAAAACTTGCTGGTTTT HWMMTCMTCTRRWMTMTARAAACTWKCTRKTTTTA Direction: Forward Position #: 16 Overlap #: 19 Alignment: HWMMTCMTCTRRWMTCTAGRYDYYAYMYATTTKKA ---------------ATAAAAACTTGCTGGTTTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 288 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 288 Motif 169 Original Motif Original Motif CCCAAGTCCC CCCAAATCCTATAAAA ATAAAACCCAARTCCY Direction: Backward Position #: 7 Overlap #: 10 Alignment: CCCAAGTCCC------ CCCAAATCCTATAAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 227 Original Motif Original Motif ATAAAACCCAARTCCY CCCAAATCTCATSTTGAAT CCCAAAWYWMAWCYYRAATCCY Direction: Forward Position #: 7 Overlap #: 13 Alignment: ------ATAAAACCCAARTCCY CCCAAATCTCATSTTGAAT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 231 Combined Motif Original Motif Reverse Complement CCCAAAWYWMAWCYYRAATCCY MGAAGGGACTTGCCTTGT CCCAAAWYWMRAMBBGAMTYSCCTTGT Direction: Forward Position #: 10 Overlap #: 13 Alignment: CCCAAAWYWMAWCYYRAATCCY----- ---------MGAAGGGACTTGCCTTGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 267 Combined Motif Reverse Complement Reverse Complement ACAAGGSMARTCBBYTMYWMWTTTGGG TCTCAAGTCCAT ACAAGGSMARTYCTCWMKTCMWTTGGG Direction: Forward Position #: 12 Overlap #: 12 Alignment: ACAAGGSMARTCBBYTMYWMWTTTGGG -----------TCTCAAGTCCAT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 164 Combined Motif Original Motif Reverse Complement ACAAGGSMARTYCTCWMKTCMWTTGGG GCGMGCGGGAACCGGGGCT ACAAGGSMARTBCKCRMGKSAAYYGGGGCT Direction: Forward Position #: 12 Overlap #: 16 Alignment: ACAAGGSMARTYCTCWMKTCMWTTGGG--- -----------GCGMGCGGGAACCGGGGCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 171 Combined Motif Original Motif Reverse Complement ACAAGGSMARTBCKCRMGKSAAYYGGGGCT ACTTTGGACTGTGGACTTTT ACAAGGSMARTBCDCTYKGGAMTBKGGRCTTTT Direction: Forward Position #: 14 Overlap #: 17 Alignment: ACAAGGSMARTBCKCRMGKSAAYYGGGGCT--- -------------ACTTTGGACTGTGGACTTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 166 Combined Motif Original Motif Original Motif ACAAGGSMARTBCDCTYKGGAMTBKGGRCTTTT AAGGGACATTKGAG ACAAGGSMARTBCDMWKKGRMATTKGRGCTTTT Direction: Forward Position #: 15 Overlap #: 14 Alignment: ACAAGGSMARTBCDCTYKGGAMTBKGGRCTTTT --------------AAGGGACATTKGAG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 160 Combined Motif Original Motif Reverse Complement ACAAGGSMARTBCDMWKKGRMATTKGRGCTTTT TACCTGAGACTGGGTAATTT ACAAGGSMARTBCDWACSKRARWYTGGGYWWTTT Direction: Forward Position #: 15 Overlap #: 19 Alignment: ACAAGGSMARTBCDMWKKGRMATTKGRGCTTTT- --------------TACCTGAGACTGGGTAATTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 322 Combined Motif Reverse Complement Reverse Complement AAAWWKCCCAKWMTMYSGTWDGBAMTYSCCTTGT GCAWSTGCAAAGGCCCT AAAWWKCCCAKWMTMBCRTVTGCAAWBGCCYTGT Direction: Forward Position #: 16 Overlap #: 17 Alignment: AAAWWKCCCAKWMTMYSGTWDGBAMTYSCCTTGT ---------------GCAWSTGCAAAGGCCCT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 100 Combined Motif Reverse Complement Reverse Complement ACAMGGCBWTTGCAVAKGBRARWYTGGGYWWTTT CGCGGCGCTTGCGGGCCAGC ACAMGGCBWTTGCAVMGSGGMGCTTGSGGKYYWKC Direction: Forward Position #: 16 Overlap #: 19 Alignment: ACAMGGCBWTTGCAVAKGBRARWYTGGGYWWTTT- ---------------CGCGGCGCTTGCGGGCCAGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 323 Reverse Complement Original Motif GYWKKYCCSCAAGCRCCSCRVTGCAAWBGCCYTGT GCTCTCAGGTCCA GSTCTBAGSTCMAGCRCCSCRVTGCAAWBGCCYTGT Direction: Forward Position #: 2 Overlap #: 12 Alignment: -GYWKKYCCSCAAGCRCCSCRVTGCAAWBGCCYTGT GCTCTCAGGTCCA----------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 291 Combined Motif Original Motif Original Motif GSTCTBAGSTCMAGCRCCSCRVTGCAAWBGCCYTGT CTGAGGACCTGAGGTCRTA GSTCTBAGSTCMAGCRCTGMGGWSCWRAGGYCDTRT Direction: Forward Position #: 17 Overlap #: 19 Alignment: GSTCTBAGSTCMAGCRCCSCRVTGCAAWBGCCYTGT ----------------CTGAGGACCTGAGGTCRTA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 309 Combined Motif Reverse Complement Original Motif AKAHGMCCTMWGSWCCYCAGMGCTRGASCTBAGASC CATTCTGGGGTCTGGAGGAY AKAHGMCCTMWGSWCCYMWKCKSKGGTCYKGAGRVY Direction: Forward Position #: 17 Overlap #: 20 Alignment: AKAHGMCCTMWGSWCCYCAGMGCTRGASCTBAGASC ----------------CATTCTGGGGTCTGGAGGAY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 64 Combined Motif Reverse Complement Original Motif KBMCTCYMGACCYSRGRWYKGGWSCWRAGGYCDTRT GAAGGCAGCTAAGGCCCGGY KBMCTCYMGACCYSRGGAAGGSAGCTAAGGCCCKGT Direction: Forward Position #: 17 Overlap #: 20 Alignment: KBMCTCYMGACCYSRGRWYKGGWSCWRAGGYCDTRT ----------------GAAGGCAGCTAAGGCCCGGY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 11 Combined Motif Reverse Complement Original Motif ACRGGGCCTTAGCTSCCTTCCKSKGGTCYKGAGRVY CTCAAGGTCCA ACRGGGCCTTAGCTSCCTYMMGGKSSWCYKGAGRVY Direction: Forward Position #: 17 Overlap #: 11 Alignment: ACRGGGCCTTAGCTSCCTTCCKSKGGTCYKGAGRVY ----------------CTCAAGGTCCA--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 98 Combined Motif Original Motif Reverse Complement ACRGGGCCTTAGCTSCCTYMMGGKSSWCYKGAGRVY CCCACGCCCACCCGGAACT ACRGGGCCTTAGCTSCCYCAMGSYCACCYGGARCDY Direction: Forward Position #: 17 Overlap #: 19 Alignment: ACRGGGCCTTAGCTSCCTYMMGGKSSWCYKGAGRVY ----------------CCCACGCCCACCCGGAACT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 312 Combined Motif Original Motif Reverse Complement ACRGGGCCTTAGCTSCCYCAMGSYCACCYGGARCDY CCCMKGGCACCCTCAGTCCT ACRGGGCCTTAGCTSCCCCMBGGCMCCCTSRRWCYT Direction: Forward Position #: 17 Overlap #: 20 Alignment: ACRGGGCCTTAGCTSCCYCAMGSYCACCYGGARCDY ----------------CCCMKGGCACCCTCAGTCCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 127 Combined Motif Reverse Complement Reverse Complement AKGWMKSAGGGYGCCBYGGGGSAGCTAAGGCCCKGT GGGGTTGGGG AKGWMKSAGGGKGSYBKGGGGSAGCTAAGGCCCKGT Direction: Forward Position #: 11 Overlap #: 10 Alignment: AKGWMKSAGGGYGCCBYGGGGSAGCTAAGGCCCKGT ----------GGGGTTGGGG---------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 232 Combined Motif Original Motif Original Motif AKGWMKSAGGGKGSYBKGGGGSAGCTAAGGCCCKGT AGTTGTAATTGGGAGACTT AKGWMKSAGGGKGSYBDGKKGYARYTRRGRSMCTKT Direction: Forward Position #: 17 Overlap #: 19 Alignment: AKGWMKSAGGGKGSYBKGGGGSAGCTAAGGCCCKGT ----------------AGTTGTAATTGGGAGACTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 269 Combined Motif Original Motif Original Motif AKGWMKSAGGGKGSYBDGKKGYARYTRRGRSMCTKT AGCGACATGTGC AKGWMKSAGGGKGSYBAGYGRCADSTGVGRSMCTKT Direction: Forward Position #: 17 Overlap #: 12 Alignment: AKGWMKSAGGGKGSYBDGKKGYARYTRRGRSMCTKT ----------------AGCGACATGTGC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 264 Combined Motif Original Motif Reverse Complement AKGWMKSAGGGKGSYBAGYGRCADSTGVGRSMCTKT TGTGACCTTGG AKGWMKSAGGGKGSYBWGTGACMTTKGVGRSMCTKT Direction: Forward Position #: 17 Overlap #: 11 Alignment: AKGWMKSAGGGKGSYBAGYGRCADSTGVGRSMCTKT ----------------TGTGACCTTGG--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 58 Combined Motif Original Motif Original Motif AKGWMKSAGGGKGSYBWGTGACMTTKGVGRSMCTKT ATGGACAYTTRGGTTGHTTC AKGWMKSAGGGKGSYBWKKGACATTTRGGDTVHTTY Direction: Forward Position #: 17 Overlap #: 20 Alignment: AKGWMKSAGGGKGSYBWGTGACMTTKGVGRSMCTKT ----------------ATGGACAYTTRGGTTGHTTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 271 Combined Motif Original Motif Original Motif AKGWMKSAGGGKGSYBWKKGACATTTRGGDTVHTTY AGGGATCTAGGTTGCR AKGWMKSAGGGKGSYBAGGGAYMTWKGBKGYRHTTY Direction: Forward Position #: 17 Overlap #: 16 Alignment: AKGWMKSAGGGKGSYBWKKGACATTTRGGDTVHTTY ----------------AGGGATCTAGGTTGCR---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 310 Combined Motif Reverse Complement Original Motif KAADKKCRVCYWARMTCCCTVMSCYCCCTSRRWCYT CCCATGCAAGTCYRAAATCC KAADKKCRVCYWARMTCCCWTRCMHSYCYVAAAYCY Direction: Forward Position #: 17 Overlap #: 20 Alignment: KAADKKCRVCYWARMTCCCTVMSCYCCCTSRRWCYT ----------------CCCATGCAAGTCYRAAATCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 182 Combined Motif Reverse Complement Reverse Complement KGKTTTVMGMSHYGMAWGGGAYMTWKGBKGYRHTTY TGGGTTCYTGGTC KGKTTTVMGMSHYGMATGGGWTCTTGGTYGYRHTTY Direction: Forward Position #: 17 Overlap #: 13 Alignment: KGKTTTVMGMSHYGMAWGGGAYMTWKGBKGYRHTTY ----------------TGGGTTCYTGGTC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 225 Combined Motif Reverse Complement Original Motif KAADKKCKACCAAGAWCCCATRCMHSYCYVAAAYCY GCACATGTAYCCYAGAACTT KAADKKCKACCAAGAWSCMMADSTABCCYRRAACYT Direction: Forward Position #: 17 Overlap #: 20 Alignment: KAADKKCKACCAAGAWCCCATRCMHSYCYVAAAYCY ----------------GCACATGTAYCCYAGAACTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 261 Combined Motif Original Motif Original Motif KAADKKCKACCAAGAWSCMMADSTABCCYRRAACYT ATCTCASAAATCACCACTA KAADKKCKACCAAGAWVYCTMASAAHYCHCVAMYWT Direction: Forward Position #: 17 Overlap #: 19 Alignment: KAADKKCKACCAAGAWSCMMADSTABCCYRRAACYT ----------------ATCTCASAAATCACCACTA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 176 Combined Motif Reverse Complement Original Motif AWMRTVGHGMHTTSTRAGMBWTCTTGGTYGYRHTTY AGGCCCCAGTGTSTGTTGTT AWMRTVGHGMHTTSTRAGVYYYCWKKGTSKBDTKTT Direction: Forward Position #: 17 Overlap #: 20 Alignment: AWMRTVGHGMHTTSTRAGMBWTCTTGGTYGYRHTTY ----------------AGGCCCCAGTGTSTGTTGTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 234 Combined Motif Reverse Complement Original Motif AAYADBRSACRYWGKKKVCTMASAAHYCHCVAMYWT AAGGAACAAACTCCRGACAC AAYADBRSACRYWGKKRASKAACAAAYYCCVRACAY Direction: Forward Position #: 17 Overlap #: 20 Alignment: AAYADBRSACRYWGKKKVCTMASAAHYCHCVAMYWT ----------------AAGGAACAAACTCCRGACAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 46 Combined Motif Reverse Complement Reverse Complement KTGTMBGGMKTTTGTTYSTKYYCWKKGTSKBDTKTT TGGGGGWGGGG KTGTMBGGMKTTTGTTTGKKGBHDGGGTSKBDTKTT Direction: Forward Position #: 17 Overlap #: 11 Alignment: KTGTMBGGMKTTTGTTYSTKYYCWKKGTSKBDTKTT ----------------TGGGGGWGGGG--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 112 Combined Motif Original Motif Reverse Complement KTGTMBGGMKTTTGTTTGKKGBHDGGGTSKBDTKTT CTTGCCCAAGGTCACACAGC KTGTMBGGMKTTTGTTYKKGSCMRRGGTCWCAYRKY Direction: Forward Position #: 17 Overlap #: 20 Alignment: KTGTMBGGMKTTTGTTTGKKGBHDGGGTSKBDTKTT ----------------CTTGCCCAAGGTCACACAGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 336 Combined Motif Reverse Complement Original Motif KYKKTGWGACCKKRGSCRRKAACAAAYYCCVRACAY ATGTAACCAAAYACCACCTG KYKKTGWGACCKKRGSMWGTAACMAAMYMCCAMCWS Direction: Forward Position #: 17 Overlap #: 20 Alignment: KYKKTGWGACCKKRGSCRRKAACAAAYYCCVRACAY ----------------ATGTAACCAAAYACCACCTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 16 Combined Motif Original Motif Reverse Complement KYKKTGWGACCKKRGSMWGTAACMAAMYMCCAMCWS GGGTCAGGGAGTTCCCTTTC KYKKTGWGACCKKRGSRGGTMASVRADTWCCMYYTC Direction: Forward Position #: 17 Overlap #: 20 Alignment: KYKKTGWGACCKKRGSMWGTAACMAAMYMCCAMCWS ----------------GGGTCAGGGAGTTCCCTTTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 119 Combined Motif Original Motif Original Motif KYKKTGWGACCKKRGSRGGTMASVRADTWCCMYYTC AAGTCCAAGATCAAGGTGYY KYKKTGWGACCKKRGSARGTCMRAGATYAMSSTBTC Direction: Forward Position #: 17 Overlap #: 20 Alignment: KYKKTGWGACCKKRGSRGGTMASVRADTWCCMYYTC ----------------AAGTCCAAGATCAAGGTGYY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 82 Combined Motif Reverse Complement Reverse Complement GAVASSYTKATCTKYGACKTSCMRRGGTCWCAYRKY GCTGGCCCKGGTGCTAAGC GAVASSYTKATCTKYGRCTKGCCMDGGTSCYAAGBY Direction: Forward Position #: 17 Overlap #: 19 Alignment: GAVASSYTKATCTKYGACKTSCMRRGGTCWCAYRKY ----------------GCTGGCCCKGGTGCTAAGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 78 Combined Motif Original Motif Reverse Complement GAVASSYTKATCTKYGRCTKGCCMDGGTSCYAAGBY CCGCGGGGCAGGGCTCG GAVASSYTKATCTKYGCCKSGSSGCRGKGCTMVGBY Direction: Forward Position #: 17 Overlap #: 17 Alignment: GAVASSYTKATCTKYGRCTKGCCMDGGTSCYAAGBY ----------------CCGCGGGGCAGGGCTCG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 128 Combined Motif Original Motif Reverse Complement GAVASSYTKATCTKYGCCKSGSSGCRGKGCTMVGBY CMGCTCCGAGTGCGG GAVASSYTKATCTKYGCCGCKCCGAGKGSSKMVGBY Direction: Forward Position #: 17 Overlap #: 15 Alignment: GAVASSYTKATCTKYGCCKSGSSGCRGKGCTMVGBY ----------------CMGCTCCGAGTGCGG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 339 Combined Motif Original Motif Reverse Complement GAVASSYTKATCTKYGCCGCKCCGAGKGSSKMVGBY GCAGGAGGTGAG GAVASSYTKATCTKYGSCRSGMSGWGDGSSKMVGBY Direction: Forward Position #: 17 Overlap #: 12 Alignment: GAVASSYTKATCTKYGCCGCKCCGAGKGSSKMVGBY ----------------GCAGGAGGTGAG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 96 Combined Motif Original Motif Original Motif GAVASSYTKATCTKYGSCRSGMSGWGDGSSKMVGBY AAGCTGAGGGAGCCGGCTCC GAVASSYTKATCTKYGAMGCKGRGGGAGCSGVCKCY Direction: Forward Position #: 17 Overlap #: 20 Alignment: GAVASSYTKATCTKYGSCRSGMSGWGDGSSKMVGBY ----------------AAGCTGAGGGAGCCGGCTCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 67 Combined Motif Original Motif Reverse Complement GAVASSYTKATCTKYGAMGCKGRGGGAGCSGVCKCY CACCAGACTCAGGAGCCCAG GAVASSYTKATCTKYGCASCWGASTSAGSMGCCYMS Direction: Forward Position #: 17 Overlap #: 20 Alignment: GAVASSYTKATCTKYGAMGCKGRGGGAGCSGVCKCY ----------------CACCAGACTCAGGAGCCCAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 155 Combined Motif Original Motif Original Motif GAVASSYTKATCTKYGCASCWGASTSAGSMGCCYMS TCCCTCCCGGACGGGGYGGC GAVASSYTKATCTKYGYMCCTSMCKGASGRGGCGRC Direction: Forward Position #: 17 Overlap #: 20 Alignment: GAVASSYTKATCTKYGCASCWGASTSAGSMGCCYMS ----------------TCCCTCCCGGACGGGGYGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 45 Combined Motif Original Motif Reverse Complement GAVASSYTKATCTKYGYMCCTSMCKGASGRGGCGRC CACTTTCCAGACTGGGCA GAVASSYTKATCTKYGCACYTYCCRGACKGGGCRRC Direction: Forward Position #: 17 Overlap #: 18 Alignment: GAVASSYTKATCTKYGYMCCTSMCKGASGRGGCGRC ----------------CACTTTCCAGACTGGGCA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 26 Combined Motif Original Motif Original Motif GAVASSYTKATCTKYGCACYTYCCRGACKGGGCRRC CTCCTGCCTCAGCCTCCCRA GAVASSYTKATCTKYGCWCCTDCCWSASYSKSCHRM Direction: Forward Position #: 17 Overlap #: 20 Alignment: GAVASSYTKATCTKYGCACYTYCCRGACKGGGCRRC ----------------CTCCTGCCTCAGCCTCCCRA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 273 Combined Motif Reverse Complement Reverse Complement YMDGSYSKSTSWGGHAGGWGCMRAGATYAMSSTBTC GTAGGCCTAGGCT YMDGSYSKSTSWGGHAGKAGSCCWRRGCTMSSTBTC Direction: Forward Position #: 17 Overlap #: 13 Alignment: YMDGSYSKSTSWGGHAGGWGCMRAGATYAMSSTBTC ----------------GTAGGCCTAGGCT------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 47 Combined Motif Original Motif Original Motif YMDGSYSKSTSWGGHAGKAGSCCWRRGCTMSSTBTC GCCTCAGTTTCCY YMDGSYSKSTSWGGHAGBMKCMSTWKSCTMSSTBTC Direction: Forward Position #: 17 Overlap #: 13 Alignment: YMDGSYSKSTSWGGHAGKAGSCCWRRGCTMSSTBTC ----------------GCCTCAGTTTCCY------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 144 Combined Motif Reverse Complement Reverse Complement GAVASSYAGSRWASYGRRBCTDCCWSASYSKSCHRM GGGCTCCCACAGTGCAGCGG GAVASSYAGSRWASYGGGGCTCCCACAGTGCASCGG Direction: Forward Position #: 17 Overlap #: 20 Alignment: GAVASSYAGSRWASYGRRBCTDCCWSASYSKSCHRM ----------------GGGCTCCCACAGTGCAGCGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 320 Combined Motif Original Motif Reverse Complement GAVASSYAGSRWASYGGGGCTCCCACAGTGCASCGG TGGGGCTCCAGATG GAVASSYAGSRWASYGDGGSKCYCMMRRTGCASCGG Direction: Forward Position #: 17 Overlap #: 14 Alignment: GAVASSYAGSRWASYGGGGCTCCCACAGTGCASCGG ----------------TGGGGCTCCAGATG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 90 Combined Motif Original Motif Reverse Complement GAVASSYAGSRWASYGDGGSKCYCMMRRTGCASCGG KGCAATGGGG GAVASSYAGSDRMAWKGGGGKCYCMMRRTGCASCGG Direction: Forward Position #: 11 Overlap #: 10 Alignment: GAVASSYAGSRWASYGDGGSKCYCMMRRTGCASCGG ----------KGCAATGGGG---------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 138 Combined Motif Original Motif Reverse Complement GAVASSYAGSDRMAWKGGGGKCYCMMRRTGCASCGG GGSKGATCTGGCTG GAVASSYAGSDRMAWKGGGGGMTCTGGCTGCASCGG Direction: Forward Position #: 17 Overlap #: 14 Alignment: GAVASSYAGSDRMAWKGGGGKCYCMMRRTGCASCGG ----------------GGSKGATCTGGCTG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 84 Combined Motif Original Motif Reverse Complement GAVASSYAGSDRMAWKGGGGGMTCTGGCTGCASCGG GGCACTGCTGGGGGACCCAG GAVASSYAGSDRMAWKGGSRSWKCTGGGKGMCCCRG Direction: Forward Position #: 17 Overlap #: 20 Alignment: GAVASSYAGSDRMAWKGGGGGMTCTGGCTGCASCGG ----------------GGCACTGCTGGGGGACCCAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 238 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 238 Motif 353 Original Motif Original Motif ACATGGGCG CACATGGAAGC CACATGGRMGC Direction: Backward Position #: 2 Overlap #: 9 Alignment: -ACATGGGCG- CACATGGAAGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 324 Original Motif Reverse Complement CACATGGRMGC TACAGGTGCGT YACAKGKGCGY Direction: Forward Position #: 1 Overlap #: 11 Alignment: CACATGGRMGC TACAGGTGCGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 235 Original Motif Original Motif YACAKGKGCGY TCCAAATGGGAGAAATTGGC TCCAHAYRGGAGMRHTTGGC Direction: Forward Position #: 5 Overlap #: 11 Alignment: ----YACAKGKGCGY----- TCCAAATGGGAGAAATTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 36 Combined Motif Reverse Complement Reverse Complement GCCAAHMYCTCCKKTHTGGA CGCCCATCGTCTGGGATGT GCCAAHMYCKCCBATCKKSWGGGATGT Direction: Forward Position #: 9 Overlap #: 12 Alignment: GCCAAHMYCTCCKKTHTGGA------- --------CGCCCATCGTCTGGGATGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 93 Combined Motif Original Motif Original Motif GCCAAHMYCKCCBATCKKSWGGGATGT CCATGTGCGG GCCAAHMYCKCCCATSTGCDGGGATGT Direction: Forward Position #: 12 Overlap #: 10 Alignment: GCCAAHMYCKCCBATCKKSWGGGATGT -----------CCATGTGCGG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 141 Combined Motif Reverse Complement Reverse Complement ACATCCCHGCASATGGGYGMRHTTGGC CTACATGGACCTT ACATCCCHGCACWWSRKSGACCTTGGC Direction: Forward Position #: 12 Overlap #: 13 Alignment: ACATCCCHGCASATGGGYGMRHTTGGC -----------CTACATGGACCTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 306 Combined Motif Original Motif Reverse Complement ACATCCCHGCACWWSRKSGACCTTGGC CAAGCGCCAGCTCATGTC ACATCCCHGCACAAGVGCSAGCTYRKSTC Direction: Forward Position #: 12 Overlap #: 16 Alignment: ACATCCCHGCACWWSRKSGACCTTGGC-- -----------CAAGCGCCAGCTCATGTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 257 Combined Motif Original Motif Original Motif ACATCCCHGCACAAGVGCSAGCTYRKSTC GAGAACACATGGACA ACATCCCHGCACRAGARCAMRYKSAYRTC Direction: Forward Position #: 13 Overlap #: 15 Alignment: ACATCCCHGCACAAGVGCSAGCTYRKSTC ------------GAGAACACATGGACA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 167 Combined Motif Reverse Complement Reverse Complement GAKKTSYMKRTGKTCTMGTGCDGGGATGT GCACAGGAGCGG GAKKTSYMKRTGKYMYAGKRSCGGGATGT Direction: Forward Position #: 13 Overlap #: 12 Alignment: GAKKTSYMKRTGKTCTMGTGCDGGGATGT ------------GCACAGGAGCGG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 104 Combined Motif Reverse Complement Original Motif ACATCCCGSKYCTKYKYCAMRYKSAYRTC CAACATGGATGRARCTGGAG ACATCCCGSKYCYRHSHYRVATGGAVVTSGAG Direction: Forward Position #: 13 Overlap #: 17 Alignment: ACATCCCGSKYCTKYKYCAMRYKSAYRTC--- ------------CAACATGGATGRARCTGGAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 33 Combined Motif Original Motif Original Motif ACATCCCGSKYCYRHSHYRVATGGAVVTSGAG ACGCCCACGGAGTCTC ACATCCCGSKYCYRACVCSCAYGGAGYYTSAG Direction: Forward Position #: 15 Overlap #: 16 Alignment: ACATCCCGSKYCYRHSHYRVATGGAVVTSGAG --------------ACGCCCACGGAGTCTC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 97 Combined Motif Original Motif Original Motif ACATCCCGSKYCYRACVCSCAYGGAGYYTSAG AAGATGGCCGAAT ACATCCCGSKYCYRAMGMYSRCSGAATYTSAG Direction: Forward Position #: 15 Overlap #: 13 Alignment: ACATCCCGSKYCYRACVCSCAYGGAGYYTSAG --------------AAGATGGCCGAAT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 82 Combined Motif Reverse Complement Original Motif CTSAKATTCSGMSMYCYTMKGKRSCGGGATGT GCTTAGCACCYGGGCCAGC CTSAKATTCSGMSMBCTTAGSRVCCGGGMYRKC Direction: Forward Position #: 15 Overlap #: 18 Alignment: CTSAKATTCSGMSMYCYTMKGKRSCGGGATGT- --------------GCTTAGCACCYGGGCCAGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 164 Combined Motif Original Motif Original Motif CTSAKATTCSGMSMBCTTAGSRVCCGGGMYRKC AGCCCCGGTTCCCGCYCGC CTSAKATTCSGMSMASYYMBGGTYCSSGCYVGC Direction: Forward Position #: 15 Overlap #: 19 Alignment: CTSAKATTCSGMSMBCTTAGSRVCCGGGMYRKC --------------AGCCCCGGTTCCCGCYCGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 166 Combined Motif Original Motif Original Motif CTSAKATTCSGMSMASYYMBGGTYCSSGCYVGC AAGGGACATTKGAG CTSAKATTCSGMSMARBBSASRTTBGVGCYVGC Direction: Forward Position #: 15 Overlap #: 14 Alignment: CTSAKATTCSGMSMASYYMBGGTYCSSGCYVGC --------------AAGGGACATTKGAG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 88 Combined Motif Reverse Complement Reverse Complement GCVKGCBCBAAKSTSBBKTYSRCSGAATYTSAG TGCAGCCCCGGT GCBGSMGCCMMKGTSBBKTYSRCSGAATYTSAG Direction: Forward Position #: 3 Overlap #: 12 Alignment: GCVKGCBCBAAKSTSBBKTYSRCSGAATYTSAG --TGCAGCCCCGGT------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 321 Combined Motif Original Motif Original Motif GCBGSMGCCMMKGTSBBKTYSRCSGAATYTSAG AAGCTCGAACTGGGTGGAGC GCBGSMGCCMMKGTAAGCTYGAMCKRRKTGGAGC Direction: Forward Position #: 15 Overlap #: 19 Alignment: GCBGSMGCCMMKGTSBBKTYSRCSGAATYTSAG- --------------AAGCTCGAACTGGGTGGAGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 265 Combined Motif Reverse Complement Reverse Complement GCTCCAYMMRGYTCKAGCTTACYRRGGCYSCVGC TGCGCATGCGC GCTCCAYMMRGYTCKWGCGCAYSVGSGCYSCVGC Direction: Forward Position #: 16 Overlap #: 11 Alignment: GCTCCAYMMRGYTCKAGCTTACYRRGGCYSCVGC ---------------TGCGCATGCGC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 35 Combined Motif Original Motif Reverse Complement GCTCCAYMMRGYTCKWGCGCAYSVGSGCYSCVGC AAGACGGGTGATTTCTG GCTCCAYMMRGYTCKARSRCRKGTGMKYTCYGGC Direction: Forward Position #: 16 Overlap #: 17 Alignment: GCTCCAYMMRGYTCKWGCGCAYSVGSGCYSCVGC ---------------AAGACGGGTGATTTCTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 215 Combined Motif Original Motif Original Motif GCTCCAYMMRGYTCKARSRCRKGTGMKYTCYGGC HGCTCCTGTGSKCCC GCTCCAYMMRGYTCKHGCTCCDGTGVKYYCYGGC Direction: Forward Position #: 16 Overlap #: 15 Alignment: GCTCCAYMMRGYTCKARSRCRKGTGMKYTCYGGC ---------------HGCTCCTGTGSKCCC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 176 Combined Motif Reverse Complement Original Motif GCCMGKKRVCACDGGAGCHYGAMCKRRKTGGAGC AGGCCCCAGTGTSTGTTGTT GCCMGKKRVCACDGGAGVCCSMASTGKGTGDWGYT Direction: Forward Position #: 16 Overlap #: 19 Alignment: GCCMGKKRVCACDGGAGCHYGAMCKRRKTGGAGC- ---------------AGGCCCCAGTGTSTGTTGTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 98 Combined Motif Original Motif Original Motif GCCMGKKRVCACDGGAGVCCSMASTGKGTGDWGYT AGTTCCGGGTGGGCGTGGG GCCMGKKRVCACDGGAGTTCCVRGTGGGYGTDGBT Direction: Forward Position #: 16 Overlap #: 19 Alignment: GCCMGKKRVCACDGGAGVCCSMASTGKGTGDWGYT ---------------AGTTCCGGGTGGGCGTGGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 326 Combined Motif Reverse Complement Original Motif ABCHACKCCCACMVGGAACTCCDGTGVKYYCYGGC GACATGGAGTCAAAGG ABCHACKCCCACMVGGAMMTSGAGTSAWMSSYGGC Direction: Forward Position #: 16 Overlap #: 16 Alignment: ABCHACKCCCACMVGGAACTCCDGTGVKYYCYGGC ---------------GACATGGAGTCAAAGG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 94 Combined Motif Original Motif Original Motif ABCHACKCCCACMVGGAMMTSGAGTSAWMSSYGGC TAAGTGGGAGCTAARC ABCHACKCCCACMVGKAAVTGGRRKCWAAGCYGGC Direction: Forward Position #: 16 Overlap #: 16 Alignment: ABCHACKCCCACMVGGAMMTSGAGTSAWMSSYGGC ---------------TAAGTGGGAGCTAARC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 193 Combined Motif Reverse Complement Original Motif GCCMGCTTWGYKMCCAVTTRCVRGTGGGYGTDGBT ATACAATGGGGGTACAGRC GCCMGCTTWGYKMCCAHWYAMDGGKGGKMSWGRBT Direction: Forward Position #: 16 Overlap #: 19 Alignment: GCCMGCTTWGYKMCCAVTTRCVRGTGGGYGTDGBT ---------------ATACAATGGGGGTACAGRC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 9 Combined Motif Reverse Complement Original Motif ABMCWSYYCCRCCDYTKWHTGGRRKCWAAGCYGGC CACATGGAGC ABMCWSYYCCRCCDYYDCATGGAGBCWAAGCYGGC Direction: Forward Position #: 16 Overlap #: 10 Alignment: ABMCWSYYCCRCCDYTKWHTGGRRKCWAAGCYGGC ---------------CACATGGAGC---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 23 Combined Motif Reverse Complement Reverse Complement GCCMGCTTWGBCTCCATGDKMDGGKGGKMSWGRBT ACTCCCTAGTGAGATGAACC GCCMGCTTWGBCTCCAYTCCCTRGTGRGAYGRACY Direction: Forward Position #: 16 Overlap #: 20 Alignment: GCCMGCTTWGBCTCCATGDKMDGGKGGKMSWGRBT ---------------ACTCCCTAGTGAGATGAACC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 132 Combined Motif Reverse Complement Original Motif KGTKCMTCKCACKAGGGAKTGGAGBCWAAGCYGGC CAAGATGGCGGC KGTKCMTCKCACKAGSAAGWKGRSGSYAAGCYGGC Direction: Forward Position #: 16 Overlap #: 12 Alignment: KGTKCMTCKCACKAGGGAKTGGAGBCWAAGCYGGC ---------------CAAGATGGCGGC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 163 Combined Motif Original Motif Reverse Complement KGTKCMTCKCACKAGSAAGWKGRSGSYAAGCYGGC GGAGCCCACGGAGG KGTKCMTCKCACKAGGGAGCCSACGGARRGCYGGC Direction: Forward Position #: 16 Overlap #: 14 Alignment: KGTKCMTCKCACKAGSAAGWKGRSGSYAAGCYGGC ---------------GGAGCCCACGGAGG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 232 Combined Motif Reverse Complement Original Motif GCCMGCMMTCCGTSGGCTCCCTRGTGRGAYGRACY AGTTGTAATTGGGAGACTT GCCMGCMMTCCGTSGASTYSYWAKTGGGAGAMWYY Direction: Forward Position #: 16 Overlap #: 19 Alignment: GCCMGCMMTCCGTSGGCTCCCTRGTGRGAYGRACY ---------------AGTTGTAATTGGGAGACTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 348 Combined Motif Reverse Complement Reverse Complement KMWRTCTCCCAYTWMSMASTCSACGGARRGCYGGC CAAASCKGTCATAGGCCAT KMWRTCTCCCAYTWMCAAMBCSRYSRTAGGCCRKC Direction: Forward Position #: 16 Overlap #: 19 Alignment: KMWRTCTCCCAYTWMSMASTCSACGGARRGCYGGC ---------------CAAASCKGTCATAGGCCAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 48 Combined Motif Reverse Complement Original Motif GRKGGCCTAKSMMSGBYTTGYWAKTGGGAGAMWYY AGCTCCCAGCGTGAGCGACG GRKGGCCTAKSMMSGAGYTSCMAGYGKGAGHVAYB Direction: Forward Position #: 16 Overlap #: 20 Alignment: GRKGGCCTAKSMMSGBYTTGYWAKTGGGAGAMWYY ---------------AGCTCCCAGCGTGAGCGACG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 137 Combined Motif Original Motif Original Motif GRKGGCCTAKSMMSGAGYTSCMAGYGKGAGHVAYB AGGTTTGTTACATAGGTAWA GRKGGCCTAKSMMSGAGBTYYSWKHSWKAGGBAYA Direction: Forward Position #: 16 Overlap #: 20 Alignment: GRKGGCCTAKSMMSGAGYTSCMAGYGKGAGHVAYB ---------------AGGTTTGTTACATAGGTAWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 323 Combined Motif Reverse Complement Original Motif TMTVCCTRWSHRWSMMABCTCSRYSRTAGGCCRKC GCTCTCAGGTCCA TMTVCCTRWSHRWSMGMTCTCDGGYCYAGGCCRKC Direction: Forward Position #: 16 Overlap #: 13 Alignment: TMTVCCTRWSHRWSMMABCTCSRYSRTAGGCCRKC ---------------GCTCTCAGGTCCA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 259 Combined Motif Original Motif Reverse Complement TMTVCCTRWSHRWSMGMTCTCDGGYCYAGGCCRKC TAATAAGGGTGTGGG TMTVCCTRWSHRWSMKAWYWMGGGTGTRGGCCRKC Direction: Forward Position #: 16 Overlap #: 15 Alignment: TMTVCCTRWSHRWSMGMTCTCDGGYCYAGGCCRKC ---------------TAATAAGGGTGTGGG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 358 Combined Motif Original Motif Reverse Complement TMTVCCTRWSHRWSMKAWYWMGGGTGTRGGCCRKC GGGGTGATGGACG TMTVCCTRWSHRWSMGRGKTRRKGKRCGGGCCRKC Direction: Forward Position #: 16 Overlap #: 13 Alignment: TMTVCCTRWSHRWSMKAWYWMGGGTGTRGGCCRKC ---------------GGGGTGATGGACG------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 289 Combined Motif Original Motif Original Motif TMTVCCTRWSHRWSMGRGKTRRKGKRCGGGCCRKC TGATGGGTGCACCAAA TMTVCCTRWSHRWSMTGATKGRTGSACSRRMCRKC Direction: Forward Position #: 16 Overlap #: 16 Alignment: TMTVCCTRWSHRWSMGRGKTRRKGKRCGGGCCRKC ---------------TGATGGGTGCACCAAA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 13 Combined Motif Original Motif Original Motif TMTVCCTRWSHRWSMTGATKGRTGSACSRRMCRKC AAGCAGGGCGAGGCATTGCC TMTVCCTRWSHRWSMWRGYAGGKSGASGMAWYRYC Direction: Forward Position #: 16 Overlap #: 20 Alignment: TMTVCCTRWSHRWSMTGATKGRTGSACSRRMCRKC ---------------AAGCAGGGCGAGGCATTGCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 223 Combined Motif Reverse Complement Original Motif GKMMWTRCSTCSYCCTKCKWYSWKHSWKAGGBAYA AGCCTCCYGAGTA GKMMWTRCSTCSYCCWGCYTCCHKAGTAAGGBAYA Direction: Forward Position #: 16 Overlap #: 13 Alignment: GKMMWTRCSTCSYCCTKCKWYSWKHSWKAGGBAYA ---------------AGCCTCCYGAGTA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 260 Combined Motif Original Motif Reverse Complement GKMMWTRCSTCSYCCWGCYTCCHKAGTAAGGBAYA TTMGTCCCAGAGGGGCACC GKMMWTRCSTCSYCCTKCBTCCCARRKGRGSAMCA Direction: Forward Position #: 16 Overlap #: 19 Alignment: GKMMWTRCSTCSYCCWGCYTCCHKAGTAAGGBAYA ---------------TTMGTCCCAGAGGGGCACC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 180 Combined Motif Original Motif Original Motif GKMMWTRCSTCSYCCTKCBTCCCARRKGRGSAMCA TGCGCATGCGCA GKMMWTRCSTCSYCCTGCGYMHSMGCDGRGSAMCA Direction: Forward Position #: 16 Overlap #: 12 Alignment: GKMMWTRCSTCSYCCTKCBTCCCARRKGRGSAMCA ---------------TGCGCATGCGCA-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 225 Combined Motif Reverse Complement Reverse Complement TGRTSCMCDGCRSHRKCGCAGGKSGASGMAWYRYC AAGTTCTKGGKTACATGTGC TGRTSCMCDGCRSHRRMGYWSKKGGRKRCATKKGC Direction: Forward Position #: 16 Overlap #: 20 Alignment: TGRTSCMCDGCRSHRKCGCAGGKSGASGMAWYRYC ---------------AAGTTCTKGGKTACATGTGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 3 Combined Motif Original Motif Reverse Complement TGRTSCMCDGCRSHRRMGYWSKKGGRKRCATKKGC TCKMGCCACTGCACTCCAGC TGRTSCMCDGCRSHRTMGYKCBRSKGCACWYCAGC Direction: Forward Position #: 16 Overlap #: 20 Alignment: TGRTSCMCDGCRSHRRMGYWSKKGGRKRCATKKGC ---------------TCKMGCCACTGCACTCCAGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 31 Combined Motif Original Motif Original Motif TGRTSCMCDGCRSHRTMGYKCBRSKGCACWYCAGC CCGTGCGCGAGCCG TGRTSCMCDGCRSHRYCGTGCVHGWGCMSWYCAGC Direction: Forward Position #: 16 Overlap #: 14 Alignment: TGRTSCMCDGCRSHRTMGYKCBRSKGCACWYCAGC ---------------CCGTGCGCGAGCCG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 284 Combined Motif Original Motif Original Motif TGRTSCMCDGCRSHRYCGTGCVHGWGCMSWYCAGC CATTTGGGAGCCCATTGA TGRTSCMCDGCRSHRCMKTKSGVRRSCCATTGAGC Direction: Forward Position #: 16 Overlap #: 18 Alignment: TGRTSCMCDGCRSHRYCGTGCVHGWGCMSWYCAGC ---------------CATTTGGGAGCCCATTGA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 17 Combined Motif Reverse Complement Original Motif GCTCAATGGSMKVCSRARYGMHSMGCDGRGSAMCA AGACAGTGGGYGCAGGHCA GCTCAATGGSMKVCSARACRGTGGGCGSAGSWCMA Direction: Forward Position #: 16 Overlap #: 19 Alignment: GCTCAATGGSMKVCSRARYGMHSMGCDGRGSAMCA ---------------AGACAGTGGGYGCAGGHCA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 63 Combined Motif Original Motif Reverse Complement GCTCAATGGSMKVCSARACRGTGGGCGSAGSWCMA AAAMAMMKMATGTTCTCACT GCTCAATGGSMKVCSAAACAVYGVRTGTWSKCMCT Direction: Forward Position #: 16 Overlap #: 20 Alignment: GCTCAATGGSMKVCSARACRGTGGGCGSAGSWCMA ---------------AAAMAMMKMATGTTCTCACT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 153 Combined Motif Original Motif Original Motif GCTCAATGGSMKVCSAAACAVYGVRTGTWSKCMCT CACTAGGGAGTGCC GCTCAATGGSMKVCSMAMYAGGGAGTGCYSKCMCT Direction: Forward Position #: 16 Overlap #: 14 Alignment: GCTCAATGGSMKVCSAAACAVYGVRTGTWSKCMCT ---------------CACTAGGGAGTGCC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 116 Combined Motif Reverse Complement Original Motif AGYGRSKGCACTCCCTMRTRSGVRRSCCATTGAGC GCAGAGGCGCTCCT AGYGRSKGCACTCCCKMAKAGGCRCTCCHTTGAGC Direction: Forward Position #: 16 Overlap #: 14 Alignment: AGYGRSKGCACTCCCTMRTRSGVRRSCCATTGAGC ---------------GCAGAGGCGCTCCT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 170 Combined Motif Reverse Complement Original Motif GCTCAAHGGAGMGCCTYTRYGGGAGTGCYSKCMCT AATCAACCCTGGYRATCAAT GCTCAAHGGAGMGCCWMTSMRCSMKKGYVVTCAMT Direction: Forward Position #: 16 Overlap #: 20 Alignment: GCTCAAHGGAGMGCCTYTRYGGGAGTGCYSKCMCT ---------------AATCAACCCTGGYRATCAAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 9 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 9 Motif 353 Reverse Complement Reverse Complement GCTCCATGTG GCTTCCATGTG SYTCCATGTGG Direction: Backward Position #: 1 Overlap #: 10 Alignment: -GCTCCATGTG GCTTCCATGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 326 Original Motif Reverse Complement SYTCCATGTGG CCTTTGACTCCATGTC CCTTYBWCYMYRTGKC Direction: Forward Position #: 5 Overlap #: 11 Alignment: ----SYTCCATGTGG- CCTTTGACTCCATGTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 128 Combined Motif Reverse Complement Original Motif GRCAMKYMGWBMAAGG CCGCACTCGGAGCRG GRCAMKCCGMHCWMGGAGCRG Direction: Forward Position #: 7 Overlap #: 10 Alignment: GRCAMKYMGWBMAAGG----- ------CCGCACTCGGAGCRG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 257 Combined Motif Reverse Complement Reverse Complement CMGCTCCYWGHRCGGYRTGKC TGTCCATGTGTTCTC CMGCTCCYTGTSCRKBTKKTCTC Direction: Forward Position #: 9 Overlap #: 13 Alignment: CMGCTCCYWGHRCGGYRTGKC-- --------TGTCCATGTGTTCTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 320 Combined Motif Reverse Complement Reverse Complement GAGARYABRKGSACAMGGAGCRG TGGGGCTCCAGATG GAGARYABRTGGRSMHSSAGMKG Direction: Forward Position #: 10 Overlap #: 14 Alignment: GAGARYABRKGSACAMGGAGCRG ---------TGGGGCTCCAGATG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 225 Combined Motif Reverse Complement Original Motif CRRCTSSHRSMCCAKBTKKTCTC GCACATGTAYCCYAGAACTT CRRCTSSHRGCMCATGTDBYCTMGAACTT Direction: Forward Position #: 10 Overlap #: 14 Alignment: CRRCTSSHRSMCCAKBTKKTCTC------ ---------GCACATGTAYCCYAGAACTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 269 Combined Motif Reverse Complement Reverse Complement AAGTTCRAGKVDACATGYGCMHSSAGMKG GCACATGTCGCT AAGTTCRAGKVDRCAYRTGYCGCBAGMKG Direction: Forward Position #: 13 Overlap #: 12 Alignment: AAGTTCRAGKVDACATGYGCMHSSAGMKG ------------GCACATGTCGCT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 141 Combined Motif Original Motif Reverse Complement AAGTTCRAGKVDRCAYRTGYCGCBAGMKG CTACATGGACCTT AAGTTCRAGKVDCYACATGGMCCTWGMKG Direction: Forward Position #: 13 Overlap #: 13 Alignment: AAGTTCRAGKVDRCAYRTGYCGCBAGMKG ------------CTACATGGACCTT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 163 Combined Motif Original Motif Original Motif AAGTTCRAGKVDCYACATGGMCCTWGMKG CCTCCGTGGGCTCC AAGTTCRAGKVDCCWCMKKGRGCTMSMKG Direction: Forward Position #: 13 Overlap #: 14 Alignment: AAGTTCRAGKVDCYACATGGMCCTWGMKG ------------CCTCCGTGGGCTCC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 96 Combined Motif Reverse Complement Reverse Complement CRRSRAGCMCRYRGWGGDBYCTMGAACTT GGAGCCGGCTCCCTCAGCTT CRRSRAGCMCRYGGAGSVKGCTCSMWCWKCTT Direction: Forward Position #: 13 Overlap #: 17 Alignment: CRRSRAGCMCRYRGWGGDBYCTMGAACTT--- ------------GGAGCCGGCTCCCTCAGCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 33 Combined Motif Reverse Complement Original Motif AAGYWGWYSGAGCYVSCTCCKKGRGCTMSMKG ACGCCCACGGAGTCTC AAGYWGWYSGAGCYACSYCCABGGRSTCBCKG Direction: Forward Position #: 15 Overlap #: 16 Alignment: AAGYWGWYSGAGCYVSCTCCKKGRGCTMSMKG --------------ACGCCCACGGAGTCTC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 48 Combined Motif Original Motif Original Motif AAGYWGWYSGAGCYACSYCCABGGRSTCBCKG AGCTCCCAGCGTGAGCGACG AAGYWGWYSGAGCYAGCTCCMAGSRBKMGCGRCG Direction: Forward Position #: 15 Overlap #: 18 Alignment: AAGYWGWYSGAGCYACSYCCABGGRSTCBCKG-- --------------AGCTCCCAGCGTGAGCGACG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 53 Combined Motif Original Motif Original Motif AAGYWGWYSGAGCYAGCTCCMAGSRBKMGCGRCG GTCCCATCGACCACCCAAG AAGYWGWYSGAGCYAGYYCCATSGACSASCSAMG Direction: Forward Position #: 16 Overlap #: 19 Alignment: AAGYWGWYSGAGCYAGCTCCMAGSRBKMGCGRCG ---------------GTCCCATCGACCACCCAAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 331 Combined Motif Original Motif Original Motif AAGYWGWYSGAGCYAGYYCCATSGACSASCSAMG CCACCACAGCTCAAGGAGGC AAGYWGWYSGAGCYASCMCCAYAGMYCAVSGAVGC Direction: Forward Position #: 16 Overlap #: 19 Alignment: AAGYWGWYSGAGCYAGYYCCATSGACSASCSAMG- ---------------CCACCACAGCTCAAGGAGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 157 Combined Motif Reverse Complement Original Motif GCVTCSBTGMRCTKTGGYGSTKGCTCSMWCWKCTT GCGCACGGCGCGG GCVTCSBTGMRCTKTGSGSRYGGCKCGRWCWKCTT Direction: Forward Position #: 16 Overlap #: 13 Alignment: GCVTCSBTGMRCTKTGGYGSTKGCTCSMWCWKCTT ---------------GCGCACGGCGCGG------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 333 Combined Motif Original Motif Reverse Complement GCVTCSBTGMRCTKTGSGSRYGGCKCGRWCWKCTT AAAGCTGGAGCTATTATCTA GCVTCSBTGMRCTKTRVVGCTGGMGCKATYATCTW Direction: Forward Position #: 16 Overlap #: 20 Alignment: GCVTCSBTGMRCTKTGSGSRYGGCKCGRWCWKCTT ---------------AAAGCTGGAGCTATTATCTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 104 Combined Motif Original Motif Original Motif GCVTCSBTGMRCTKTRVVGCTGGMGCKATYATCTW CAACATGGATGRARCTGGAG GCVTCSBTGMRCTKTVAASMTGGAKSDADYWKSWD Direction: Forward Position #: 16 Overlap #: 20 Alignment: GCVTCSBTGMRCTKTRVVGCTGGMGCKATYATCTW ---------------CAACATGGATGRARCTGGAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 68 Combined Motif Reverse Complement Original Motif DWSYWKDTHSRTCCAYSTTVAYAGMYCAVSGAVGC CATGGCGGGCTGCAGGTC DWSYWKDTHSRTCCACRTGGMBGGCTSMAGGWCGC Direction: Forward Position #: 16 Overlap #: 18 Alignment: DWSYWKDTHSRTCCAYSTTVAYAGMYCAVSGAVGC ---------------CATGGCGGGCTGCAGGTC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 98 Combined Motif Original Motif Original Motif DWSYWKDTHSRTCCACRTGGMBGGCTSMAGGWCGC AGTTCCGGGTGGGCGTGGG DWSYWKDTHSRTCCAMGTKSCGGGYKGSMGKGGGC Direction: Forward Position #: 16 Overlap #: 19 Alignment: DWSYWKDTHSRTCCACRTGGMBGGCTSMAGGWCGC ---------------AGTTCCGGGTGGGCGTGGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 159 Combined Motif Original Motif Reverse Complement DWSYWKDTHSRTCCAMGTKSCGGGYKGSMGKGGGC TGCTCACACAAAGCCTGT DWSYWKDTHSRTCCATGYTCMSRSAARGCSTGKGC Direction: Forward Position #: 16 Overlap #: 18 Alignment: DWSYWKDTHSRTCCAMGTKSCGGGYKGSMGKGGGC ---------------TGCTCACACAAAGCCTGT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 321 Combined Motif Original Motif Original Motif DWSYWKDTHSRTCCATGYTCMSRSAARGCSTGKGC AAGCTCGAACTGGGTGGAGC DWSYWKDTHSRTCCAARBYYMSAVMTGGSYKGDGC Direction: Forward Position #: 16 Overlap #: 20 Alignment: DWSYWKDTHSRTCCATGYTCMSRSAARGCSTGKGC ---------------AAGCTCGAACTGGGTGGAGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 65 Combined Motif Reverse Complement Original Motif GCDCYMSCCARBTSRMKBKTTGGAKSDADYWKSWD AGAAATCGAGCRCAGCGCCG GCDCYMSCCARBTSRAGAWWTSGAGCRMASYGCHG Direction: Forward Position #: 16 Overlap #: 20 Alignment: GCDCYMSCCARBTSRMKBKTTGGAKSDADYWKSWD ---------------AGAAATCGAGCRCAGCGCCG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 19 Combined Motif Original Motif Reverse Complement GCDCYMSCCARBTSRAGAWWTSGAGCRMASYGCHG MGGGATATAATCTCCTGGTG GCDCYMSCCARBTSRMGGGATAKARYSYMSTGSTG Direction: Forward Position #: 16 Overlap #: 20 Alignment: GCDCYMSCCARBTSRAGAWWTSGAGCRMASYGCHG ---------------MGGGATATAATCTCCTGGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 277 Combined Motif Reverse Complement Original Motif CASCASRMSMKTRTATCCCYMSAVMTGGSYKGDGC GCCCTCACCAGAAGC CASCASRMSMKTRTAKCCCTCAMCAKRRGCKGDGC Direction: Forward Position #: 16 Overlap #: 15 Alignment: CASCASRMSMKTRTATCCCYMSAVMTGGSYKGDGC ---------------GCCCTCACCAGAAGC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 25 Combined Motif Original Motif Original Motif CASCASRMSMKTRTAKCCCTCAMCAKRRGCKGDGC CATTTCCAWCTGAGGTAC CASCASRMSMKTRTABMYYTCCAHMTGAGSTRCGC Direction: Forward Position #: 16 Overlap #: 18 Alignment: CASCASRMSMKTRTAKCCCTCAMCAKRRGCKGDGC ---------------CATTTCCAWCTGAGGTAC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 27 Combined Motif Original Motif Original Motif CASCASRMSMKTRTABMYYTCCAHMTGAGSTRCGC CACTTCCCAGACGGGGCG CASCASRMSMKTRTACACTTCCMASWSRGGKVSGC Direction: Forward Position #: 16 Overlap #: 18 Alignment: CASCASRMSMKTRTABMYYTCCAHMTGAGSTRCGC ---------------CACTTCCCAGACGGGGCG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 175 Combined Motif Original Motif Original Motif CASCASRMSMKTRTACACTTCCMASWSRGGKVSGC AGCTAGAYACAGAGTGC CASCASRMSMKTRTAMRCTWSMYACAGRGKGCSGC Direction: Forward Position #: 16 Overlap #: 17 Alignment: CASCASRMSMKTRTACACTTCCMASWSRGGKVSGC ---------------AGCTAGAYACAGAGTGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 119 Combined Motif Reverse Complement Original Motif GCSGCRCKCTGTKYSWAGMYTAKARYSYMSTGSTG AAGTCCAAGATCAAGGTGYY GCSGCRCKCTGTKYSAAGHYYAWRATCAAGKKGYB Direction: Forward Position #: 16 Overlap #: 20 Alignment: GCSGCRCKCTGTKYSWAGMYTAKARYSYMSTGSTG ---------------AAGTCCAAGATCAAGGTGYY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 340 Combined Motif Original Motif Original Motif GCSGCRCKCTGTKYSAAGHYYAWRATCAAGKKGYB GACCCAGAGAGC GCSGCRCKCTGTKYSRASCCWRAGAKCAAGKKGYB Direction: Forward Position #: 16 Overlap #: 12 Alignment: GCSGCRCKCTGTKYSAAGHYYAWRATCAAGKKGYB ---------------GACCCAGAGAGC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 61 Reverse Complement Reverse Complement BMCYYCTTGYTCTMWGGSTMSMYACAGRGKGCSGC TGGCTTCACCCAGTGGATCC TGGCTTCACCCAGTKGMTCYMWGGSTMSMYACAGRGKGCSGC Direction: Forward Position #: 8 Overlap #: 13 Alignment: -------BMCYYCTTGYTCTMWGGSTMSMYACAGRGKGCSGC TGGCTTCACCCAGTGGATCC---------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 149 Combined Motif Original Motif Original Motif TGGCTTCACCCAGTKGMTCYMWGGSTMSMYACAGRGKGCSGC ACTCAGCCCRCCTGCACCC TGGCTTCACCCAGTKGMTCACTSRGYCCRCMYRSASCSCSGC Direction: Forward Position #: 20 Overlap #: 19 Alignment: TGGCTTCACCCAGTKGMTCYMWGGSTMSMYACAGRGKGCSGC -------------------ACTCAGCCCRCCTGCACCC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 293 Combined Motif Reverse Complement Reverse Complement GCSGSGSTSMMRGKGGKCKSAGTGAYCYACTGGGTGAAGCCA GGGAGGTGTCTCCCAGTCAG GCSGSGSTSMMRGKGGKCKGRGWGRTSYMYCSSRKKAAGCCA Direction: Forward Position #: 20 Overlap #: 20 Alignment: GCSGSGSTSMMRGKGGKCKSAGTGAYCYACTGGGTGAAGCCA -------------------GGGAGGTGTCTCCCAGTCAG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 310 Combined Motif Reverse Complement Original Motif TGGCTTYYKSSGMRMSAMCWCMCRGYCCRCMYRSASCSCSGC CCCATGCAAGTCYRAAATCC TGGCTTYYKSSGMRMSAMCCCCMWGCMMGYCYRMAMYCCSGC Direction: Forward Position #: 20 Overlap #: 20 Alignment: TGGCTTYYKSSGMRMSAMCWCMCRGYCCRCMYRSASCSCSGC -------------------CCCATGCAAGTCYRAAATCC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 17 Combined Motif Reverse Complement Original Motif GCSGGMYTYMMGMCYYGCWYGGGGRTSYMYCSSRKKAAGCCA AGACAGTGGGYGCAGGHCA GCSGGMYTYMMGMCYYGCWHGRSRGTGGSYSCMGGDMAGCCA Direction: Forward Position #: 20 Overlap #: 19 Alignment: GCSGGMYTYMMGMCYYGCWYGGGGRTSYMYCSSRKKAAGCCA -------------------AGACAGTGGGYGCAGGHCA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 82 Combined Motif Reverse Complement Original Motif TGGCTRDCCYGSMSCCACKSKCHWGCMMGYCYRMAMYCCSGC GCTTAGCACCYGGGCCAGC TGGCTRDCCYGSMSCCACKGYYTAGCACSYSGGCMAGCCSGC Direction: Forward Position #: 20 Overlap #: 19 Alignment: TGGCTRDCCYGSMSCCACKSKCHWGCMMGYCYRMAMYCCSGC -------------------GCTTAGCACCYGGGCCAGC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 200 Combined Motif Reverse Complement Original Motif GCSGGCTRGCCSKSGTGCTAMKCRGTGGSYSCMGGDMAGCCA ACCCCGTCTGGGA GCSGGCTRGCCSKSGTGCTACCCMGTSTGBGMMGGDMAGCCA Direction: Forward Position #: 20 Overlap #: 13 Alignment: GCSGGCTRGCCSKSGTGCTAMKCRGTGGSYSCMGGDMAGCCA -------------------ACCCCGTCTGGGA---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 140 Combined Motif Reverse Complement Original Motif TGGCTRDCCYYCBCASACRGGGTAGCACSYSGGCMAGCCSGC CTCCATGAAGTC TGGCTRDCCYYCBCASACRSKSYAKSAMGTCGGCMAGCCSGC Direction: Forward Position #: 20 Overlap #: 12 Alignment: TGGCTRDCCYYCBCASACRGGGTAGCACSYSGGCMAGCCSGC -------------------CTCCATGAAGTC----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 275 Combined Motif Reverse Complement Reverse Complement GCSGGCTRGCCGACYTSYTKSRSMGTSTGBGMMGGDMAGCCA TTTAACTCTGTGAG GCSGGCTRGCCGACYTSYTTBWRASTCTGTGAGGGDMAGCCA Direction: Forward Position #: 20 Overlap #: 14 Alignment: GCSGGCTRGCCGACYTSYTKSRSMGTSTGBGMMGGDMAGCCA -------------------TTTAACTCTGTGAG--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 52 Combined Motif Reverse Complement Reverse Complement TGGCTRDCCCTCACAGASTKWVAAKSAMGTCGGCMAGCCSGC GGTGGAGCTGCCTGCCAGTC TGGCTRDCCCTCACAGASTGGTRRRGMWGYCTGCCAGYCSGC Direction: Forward Position #: 20 Overlap #: 20 Alignment: TGGCTRDCCCTCACAGASTKWVAAKSAMGTCGGCMAGCCSGC -------------------GGTGGAGCTGCCTGCCAGTC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 253 Combined Motif Original Motif Original Motif TGGCTRDCCCTCACAGASTGGTRRRGMWGYCTGCCAGYCSGC AGAGTCTCACTCTGT TGGCTRDCCCTCACAGASTRGWGKMKCDSTCTGYCAGYCSGC Direction: Forward Position #: 20 Overlap #: 15 Alignment: TGGCTRDCCCTCACAGASTGGTRRRGMWGYCTGCCAGYCSGC -------------------AGAGTCTCACTCTGT-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 211 Combined Motif Original Motif Reverse Complement TGGCTRDCCCTCACAGASTRGWGKMKCDSTCTGYCAGYCSGC CGGCTTCATTCTTGAAGTC TGGCTRDCCCTCACAGASTVGGSTTCMDYYYTGAMRKCCSGC Direction: Forward Position #: 20 Overlap #: 19 Alignment: TGGCTRDCCCTCACAGASTRGWGKMKCDSTCTGYCAGYCSGC -------------------CGGCTTCATTCTTGAAGTC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 6 Combined Motif Original Motif Reverse Complement TGGCTRDCCCTCACAGASTVGGSTTCMDYYYTGAMRKCCSGC GAGSTTGCAGTGAGC TGGCTRDCCCTCACAGASTGDGSTTGMAKYSWGMMRKCCSGC Direction: Forward Position #: 20 Overlap #: 15 Alignment: TGGCTRDCCCTCACAGASTVGGSTTCMDYYYTGAMRKCCSGC -------------------GAGSTTGCAGTGAGC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 195 Combined Motif Reverse Complement Reverse Complement GCSGGRMYRCWSMYTRCAASCHCASTCTGTGAGGGDMAGCCA ACCCAATWTGTAGTCTTTTA GCSGGRMYRCWSMYTRCAAACCCAMTCTGTRRKVKTYWRCCA Direction: Forward Position #: 20 Overlap #: 20 Alignment: GCSGGRMYRCWSMYTRCAASCHCASTCTGTGAGGGDMAGCCA -------------------ACCCAATWTGTAGTCTTTTA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 305 Combined Motif Original Motif Reverse Complement GCSGGRMYRCWSMYTRCAAACCCAMTCTGTRRKVKTYWRCCA GCTCTCAATTGGTCATT GCSGGRMYRCWSMYTRCAAGCYCWCWMTKKGKCATTYWRCCA Direction: Forward Position #: 20 Overlap #: 17 Alignment: GCSGGRMYRCWSMYTRCAAACCCAMTCTGTRRKVKTYWRCCA -------------------GCTCTCAATTGGTCATT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 137 Combined Motif Original Motif Reverse Complement GCSGGRMYRCWSMYTRCAAGCYCWCWMTKKGKCATTYWRCCA TWTACCTATGTAACAAACCT GCSGGRMYRCWSMYTRCAAKMTMYCTATKTRACAWWCHDCCA Direction: Forward Position #: 20 Overlap #: 20 Alignment: GCSGGRMYRCWSMYTRCAAGCYCWCWMTKKGKCATTYWRCCA -------------------TWTACCTATGTAACAAACCT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 144 Combined Motif Reverse Complement Original Motif TGGDDGWWTGTKAYATAGKYARRTTGMAKYSWGMMRKCCSGC CCGCTGCACTGTGGGAGCCC TGGDDGWWTGTKAYATAGKCMGCTKCAMTKTRGSAGYCCSGC Direction: Forward Position #: 20 Overlap #: 20 Alignment: TGGDDGWWTGTKAYATAGKYARRTTGMAKYSWGMMRKCCSGC -------------------CCGCTGCACTGTGGGAGCCC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 108 Combined Motif Original Motif Reverse Complement TGGDDGWWTGTKAYATAGKCMGCTKCAMTKTRGSAGYCCSGC GCGCTCKTCGGGGAGGCTCG TGGDDGWWTGTKAYATAGKSMGCTBSWCKGKGRGRSTCSSGC Direction: Forward Position #: 20 Overlap #: 20 Alignment: TGGDDGWWTGTKAYATAGKCMGCTKCAMTKTRGSAGYCCSGC -------------------GCGCTCKTCGGGGAGGCTCG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 132 Combined Motif Reverse Complement Reverse Complement GCSSGASMCKCYCYGWSBAGCRSYCTATKTRACAWWCHDCCA GCCGCCATCTTG GCSSGASMCKCYCYGWSBAGCSGCCAWYTTRACAWWCHDCCA Direction: Forward Position #: 20 Overlap #: 12 Alignment: GCSSGASMCKCYCYGWSBAGCRSYCTATKTRACAWWCHDCCA -------------------GCCGCCATCTTG----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 307 Combined Motif Original Motif Reverse Complement GCSSGASMCKCYCYGWSBAGCSGCCAWYTTRACAWWCHDCCA AGAGCTCTGGCTGGCATCT GCSSGASMCKCYCYGWSBARSAGCYMTGKYKRSMATCTDCCA Direction: Forward Position #: 20 Overlap #: 19 Alignment: GCSSGASMCKCYCYGWSBAGCSGCCAWYTTRACAWWCHDCCA -------------------AGAGCTCTGGCTGGCATCT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 292 Combined Motif Reverse Complement Reverse Complement TGGDAGATRSMRKYCARMGCTSKTBSWCKGKGRGRSTCSSGC TTGTCCCACTGGAAGGTCTT TGGDAGATRSMRKYCARMGYTGTYCCACTGGRAGGBYYYSGC Direction: Forward Position #: 20 Overlap #: 20 Alignment: TGGDAGATRSMRKYCARMGCTSKTBSWCKGKGRGRSTCSSGC -------------------TTGTCCCACTGGAAGGTCTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 207 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 207 Motif 11 Original Motif Reverse Complement GACCTTGA TGGACCTTGAG TGRMCYTKRAG Direction: Forward Position #: 2 Overlap #: 8 Alignment: -GACCTTGA-- TGGACCTTGAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 264 Reverse Complement Original Motif CTMRAKGRKCA CCAAGGTCACA CYAARGKCDCA Direction: Forward Position #: 1 Overlap #: 11 Alignment: CTMRAKGRKCA CCAAGGTCACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 362 Original Motif Original Motif CYAARGKCDCA GCTCTGAAGGTCC GCTCYBAAGGTCCCA Direction: Forward Position #: 5 Overlap #: 9 Alignment: ----CYAARGKCDCA GCTCTGAAGGTCC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 302 Combined Motif Reverse Complement Original Motif TGGGACCTTBMGAGC GACCCTGAGAGC TGGGASMYYSHGAGMGC Direction: Forward Position #: 6 Overlap #: 10 Alignment: TGGGACCTTBMGAGC-- -----GACCCTGAGAGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 328 Combined Motif Original Motif Original Motif TGGGASMYYSHGAGMGC GATACAAAATCAATGTR TGGGASRHTAYRARAKCAATGTR Direction: Forward Position #: 7 Overlap #: 11 Alignment: TGGGASMYYSHGAGMGC------ ------GATACAAAATCAATGTR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 119 Combined Motif Original Motif Reverse Complement TGGGASRHTAYRARAKCAATGTR KKCACCTTGATCTTGGACTT TGGGASRHTDBVAVMTYRATSTDGGACTT Direction: Forward Position #: 10 Overlap #: 14 Alignment: TGGGASRHTAYRARAKCAATGTR------ ---------KKCACCTTGATCTTGGACTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 274 Combined Motif Reverse Complement Original Motif AAGTCCDASATKKARVTBVHAHMSTCCCA CTGGTCAAGGAAA AAGTCCDASATKBWGGTCAARBAVWCCCA Direction: Forward Position #: 13 Overlap #: 13 Alignment: AAGTCCDASATKKARVTBVHAHMSTCCCA ------------CTGGTCAAGGAAA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 292 Combined Motif Reverse Complement Reverse Complement TGGGWBTBMTTGACCWBRATSTDGGACTT TTGTCCCACTGGAAGGTCTT TGGGWBTBMTTGWYSTCVMWCTGGRASKTCTT Direction: Forward Position #: 13 Overlap #: 17 Alignment: TGGGWBTBMTTGACCWBRATSTDGGACTT--- ------------TTGTCCCACTGGAAGGTCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 267 Combined Motif Original Motif Original Motif TGGGWBTBMTTGWYSTCVMWCTGGRASKTCTT ATGGACTTGAGA TGGGWBTBMTTGWYATGGMCYTGRGASKTCTT Direction: Forward Position #: 15 Overlap #: 12 Alignment: TGGGWBTBMTTGWYSTCVMWCTGGRASKTCTT --------------ATGGACTTGAGA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 326 Combined Motif Original Motif Reverse Complement TGGGWBTBMTTGWYATGGMCYTGRGASKTCTT CCTTTGACTCCATGTC TGGGWBTBMTTGWYMYKKWSAYKVSABGTCTT Direction: Forward Position #: 15 Overlap #: 16 Alignment: TGGGWBTBMTTGWYATGGMCYTGRGASKTCTT --------------CCTTTGACTCCATGTC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 60 Combined Motif Reverse Complement Original Motif AAGACVTSVRKTSWRRKRMWCAARBAVWCCCA GATCACGAGGTCAGGAG AAGACVTSVRKTSWGATCAHSARGTMARSASA Direction: Forward Position #: 15 Overlap #: 17 Alignment: AAGACVTSVRKTSWRRKRMWCAARBAVWCCCA --------------GATCACGAGGTCAGGAG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 179 Combined Motif Original Motif Reverse Complement AAGACVTSVRKTSWGATCAHSARGTMARSASA GAATACCTCCTGAAGGACCT AAGACVTSVRKTSWGAWBACCWSSTSAAGRVMCT Direction: Forward Position #: 15 Overlap #: 18 Alignment: AAGACVTSVRKTSWGATCAHSARGTMARSASA-- --------------GAATACCTCCTGAAGGACCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 340 Combined Motif Reverse Complement Original Motif AGRBMCTTSASSWGGTVWTCWSAYKVSABGTCTT GACCCAGAGAGC AGRBMCTTSASSWGGKACYCAGAGWGCABGTCTT Direction: Forward Position #: 16 Overlap #: 12 Alignment: AGRBMCTTSASSWGGTVWTCWSAYKVSABGTCTT ---------------GACCCAGAGAGC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 350 Combined Motif Original Motif Reverse Complement AGRBMCTTSASSWGGKACYCAGAGWGCABGTCTT TGCTGGAGGTCCACTCCAGA AGRBMCTTSASSWGGTRCTSRRRGTSCACKYCWKA Direction: Forward Position #: 16 Overlap #: 19 Alignment: AGRBMCTTSASSWGGKACYCAGAGWGCABGTCTT- ---------------TGCTGGAGGTCCACTCCAGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 112 Combined Motif Reverse Complement Reverse Complement TYWGMRGTGSACMKMSAGMACCWSSTSAAGRVMCT CTTGCCCAAGGTCACACAGC TYWGMRGTGSACMKMCHKVMCCAMGKBMASAMASY Direction: Forward Position #: 16 Overlap #: 20 Alignment: TYWGMRGTGSACMKMSAGMACCWSSTSAAGRVMCT ---------------CTTGCCCAAGGTCACACAGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 184 Combined Motif Reverse Complement Original Motif MSTRTSTRBRCYTGGYVRHGRRRGTSCACKYCWKA ATATTGATGATCCTGACC MSTRTSTRBRCYTGGHTATKGATGWYCMYKHCHKA Direction: Forward Position #: 16 Overlap #: 18 Alignment: MSTRTSTRBRCYTGGYVRHGRRRGTSCACKYCWKA ---------------ATATTGATGATCCTGACC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 346 Combined Motif Original Motif Original Motif MSTRTSTRBRCYTGGHTATKGATGWYCMYKHCHKA AAATCTTAAAGCTC MSTRTSTRBRCYTGGAAATYKWARAGCTYKHCHKA Direction: Forward Position #: 16 Overlap #: 14 Alignment: MSTRTSTRBRCYTGGHTATKGATGWYCMYKHCHKA ---------------AAATCTTAAAGCTC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 182 Combined Motif Reverse Complement Reverse Complement TYDGHYKAGCTKTWRKATTTCCAMGKBMASAMASY TGGGTTCYTGGTC TYDGHYKAGCTKTWRTRKKTYCHTGGTCASAMASY Direction: Forward Position #: 16 Overlap #: 13 Alignment: TYDGHYKAGCTKTWRKATTTCCAMGKBMASAMASY ---------------TGGGTTCYTGGTC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 68 Combined Motif Original Motif Original Motif TYDGHYKAGCTKTWRTRKKTYCHTGGTCASAMASY CATGGCGGGCTGCAGGTC TYDGHYKAGCTKTWRYATGKYSGGSKKCAGGYMSY Direction: Forward Position #: 16 Overlap #: 18 Alignment: TYDGHYKAGCTKTWRTRKKTYCHTGGTCASAMASY ---------------CATGGCGGGCTGCAGGTC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 327 Combined Motif Reverse Complement Original Motif MSRMCCTGYRSCCSKYCATKKWARAGCTYKHCHKA AGGAGGAAGTCAATTTC MSRMCCTGYRSCCSKMSRWGGAAGWSMATKTCHKA Direction: Forward Position #: 16 Overlap #: 17 Alignment: MSRMCCTGYRSCCSKYCATKKWARAGCTYKHCHKA ---------------AGGAGGAAGTCAATTTC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 331 Combined Motif Reverse Complement Original Motif TYDGARATYSWCTTCCWMSYYSGGSKKCAGGYMSY CCACCACAGCTCAAGGAGGC TYDGARATYSWCTTCCHACYHCAGCTSMAGGASGC Direction: Forward Position #: 16 Overlap #: 20 Alignment: TYDGARATYSWCTTCCWMSYYSGGSKKCAGGYMSY ---------------CCACCACAGCTCAAGGAGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 104 Combined Motif Original Motif Original Motif TYDGARATYSWCTTCCHACYHCAGCTSMAGGASGC CAACATGGATGRARCTGGAG TYDGARATYSWCTTCCVACMTSRRYKVAASKRGRV Direction: Forward Position #: 16 Overlap #: 20 Alignment: TYDGARATYSWCTTCCHACYHCAGCTSMAGGASGC ---------------CAACATGGATGRARCTGGAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 271 Combined Motif Original Motif Original Motif TYDGARATYSWCTTCCVACMTSRRYKVAASKRGRV AGGGATCTAGGTTGCR TYDGARATYSWCTTCMGRSATCKAGGBWRCDRGRV Direction: Forward Position #: 16 Overlap #: 16 Alignment: TYDGARATYSWCTTCCVACMTSRRYKVAASKRGRV ---------------AGGGATCTAGGTTGCR---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 227 Combined Motif Original Motif Reverse Complement TYDGARATYSWCTTCMGRSATCKAGGBWRCDRGRV ATTCAASATGAGATTTGGG TYDGARATYSWCTTCAKDCAWSWWGRGAKYTGGGV Direction: Forward Position #: 16 Overlap #: 19 Alignment: TYDGARATYSWCTTCMGRSATCKAGGBWRCDRGRV ---------------ATTCAASATGAGATTTGGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 8 Combined Motif Original Motif Original Motif TYDGARATYSWCTTCAKDCAWSWWGRGAKYTGGGV ATCRCTTGAGSYCAGGAGKT TYDGARATYSWCTTCATBVMWYGAGVBMDKKRGKB Direction: Forward Position #: 16 Overlap #: 20 Alignment: TYDGARATYSWCTTCAKDCAWSWWGRGAKYTGGGV ---------------ATCRCTTGAGSYCAGGAGKT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 166 Combined Motif Original Motif Reverse Complement TYDGARATYSWCTTCATBVMWYGAGVBMDKKRGKB CTCRAATGTCCCTT TYDGARATYSWCTTCMTCRAWTGWSCYTTKKRGKB Direction: Forward Position #: 16 Overlap #: 14 Alignment: TYDGARATYSWCTTCATBVMWYGAGVBMDKKRGKB ---------------CTCRAATGTCCCTT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 85 Combined Motif Reverse Complement Reverse Complement VYCKYYAAKGSWCAWTKGARGAAGWSMATKTCHKA TGGAGAACCTTTATGTCTAG VYCKYYAAKGSWCAWTGGAGRAMSTTWATKTCTDR Direction: Forward Position #: 16 Overlap #: 20 Alignment: VYCKYYAAKGSWCAWTKGARGAAGWSMATKTCHKA ---------------TGGAGAACCTTTATGTCTAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 100 Combined Motif Reverse Complement Reverse Complement MDAGAYATWAASYTKCTCCAWTGWSCYTTKKRGKB CGCGGCGCTTGCGGGCCAGC MDAGAYATWAASYTKCKCSRMKSTYSCKGGSMRGC Direction: Forward Position #: 16 Overlap #: 20 Alignment: MDAGAYATWAASYTKCTCCAWTGWSCYTTKKRGKB ---------------CGCGGCGCTTGCGGGCCAGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 352 Combined Motif Original Motif Original Motif MDAGAYATWAASYTKCKCSRMKSTYSCKGGSMRGC CATCTTCA MDAGAYATWMABCTTCDCSRMKSTYSCKGGSMRGC Direction: Forward Position #: 10 Overlap #: 8 Alignment: MDAGAYATWAASYTKCKCSRMKSTYSCKGGSMRGC ---------CATCTTCA------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 238 Combined Motif Original Motif Reverse Complement MDAGAYATWMABCTTCDCSRMKSTYSCKGGSMRGC CGCCCATGT MDAGAYATWMABCTTCGCCSATGTYSCKGGSMRGC Direction: Forward Position #: 16 Overlap #: 9 Alignment: MDAGAYATWMABCTTCDCSRMKSTYSCKGGSMRGC ---------------CGCCCATGT----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 324 Combined Motif Reverse Complement Original Motif GCKRSCCYGSMACATSGGCGAAGVTRWATKTCTDR ACGCACCTGTA GCKRSCCYGSMACATASGCRMMKGTRWATKTCTDR Direction: Forward Position #: 16 Overlap #: 11 Alignment: GCKRSCCYGSMACATSGGCGAAGVTRWATKTCTDR ---------------ACGCACCTGTA--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 353 Combined Motif Original Motif Reverse Complement GCKRSCCYGSMACATASGCRMMKGTRWATKTCTDR GCTTCCATGTG GCKRSCCYGSMACATGCKYVCATGTRWATKTCTDR Direction: Forward Position #: 16 Overlap #: 11 Alignment: GCKRSCCYGSMACATASGCRMMKGTRWATKTCTDR ---------------GCTTCCATGTG--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 283 Combined Motif Original Motif Original Motif GCKRSCCYGSMACATGCKYVCATGTRWATKTCTDR GCCCTCACCATCC GCKRSCCYGSMACATGCCCBCAYSWKCMTKTCTDR Direction: Forward Position #: 16 Overlap #: 13 Alignment: GCKRSCCYGSMACATGCKYVCATGTRWATKTCTDR ---------------GCCCTCACCATCC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 322 Combined Motif Reverse Complement Original Motif MDAGAYARGRWSMTGVGGGCATGTYSCKGGSMRGC AGGGCCTTTGCASWTGC MDAGAYARGRWSMTGAGGGCMTKTGCMBDKSCRGC Direction: Forward Position #: 16 Overlap #: 17 Alignment: MDAGAYARGRWSMTGVGGGCATGTYSCKGGSMRGC ---------------AGGGCCTTTGCASWTGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 44 Combined Motif Reverse Complement Original Motif GCKGSRHBYGCARARGCCCTCAYSWKCMTKTCTDR AATCGCTTGAACC GCKGSRHBYGCARARRMYCDCWTGAACCTKTCTDR Direction: Forward Position #: 16 Overlap #: 13 Alignment: GCKGSRHBYGCARARGCCCTCAYSWKCMTKTCTDR ---------------AATCGCTTGAACC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 65 Combined Motif Reverse Complement Reverse Complement MDAGAYAGGTTCAWGHGMYKMTKTGCMBDKSCRGC CGGCGCTGMGCTCGATTTCT MDAGAYAGGTTCAWGCGVCGCTGYGCTCGAKYWST Direction: Forward Position #: 16 Overlap #: 20 Alignment: MDAGAYAGGTTCAWGHGMYKMTKTGCMBDKSCRGC ---------------CGGCGCTGMGCTCGATTTCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 48 Combined Motif Original Motif Reverse Complement MDAGAYAGGTTCAWGCGVCGCTGYGCTCGAKYWST CGTCGCTCACGCTGGGAGCT MDAGAYAGGTTCAWGCGDCGCTSAVSCYGGGWGCT Direction: Forward Position #: 16 Overlap #: 20 Alignment: MDAGAYAGGTTCAWGCGVCGCTGYGCTCGAKYWST ---------------CGTCGCTCACGCTGGGAGCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 98 Combined Motif Original Motif Original Motif MDAGAYAGGTTCAWGCGDCGCTSAVSCYGGGWGCT AGTTCCGGGTGGGCGTGGG MDAGAYAGGTTCAWGMGTYSCKGRTGSKSGKRGST Direction: Forward Position #: 16 Overlap #: 19 Alignment: MDAGAYAGGTTCAWGCGDCGCTSAVSCYGGGWGCT ---------------AGTTCCGGGTGGGCGTGGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 303 Combined Motif Original Motif Original Motif MDAGAYAGGTTCAWGMGTYSCKGRTGSKSGKRGST AGTTCTTAAAGATGGT MDAGAYAGGTTCAWGAGTTCYTRAWGVTGGTRGST Direction: Forward Position #: 16 Overlap #: 16 Alignment: MDAGAYAGGTTCAWGMGTYSCKGRTGSKSGKRGST ---------------AGTTCTTAAAGATGGT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 284 Combined Motif Reverse Complement Original Motif ASCMACCABCWTKAMGAACTCWTGAACCTKTCTDR CATTTGGGAGCCCATTGA ASCMACCABCWTKAMSAWYTSDKRRHCCWTTSWDR Direction: Forward Position #: 16 Overlap #: 18 Alignment: ASCMACCABCWTKAMGAACTCWTGAACCTKTCTDR ---------------CATTTGGGAGCCCATTGA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 178 Combined Motif Reverse Complement Reverse Complement MDWSAAWGGDKKRHSAKWTSYTRAWGVTGGTRGST ATGTGGAGGTGGAAGACAGT MDWSAAWGGDKKRHSAKDTGBWGRTGGWRGWSRGT Direction: Forward Position #: 16 Overlap #: 20 Alignment: MDWSAAWGGDKKRHSAKWTSYTRAWGVTGGTRGST ---------------ATGTGGAGGTGGAAGACAGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 235 Combined Motif Reverse Complement Reverse Complement ACKSWCKWCCAMCWBCAHRTSDKRRHCCWTTSWDR GCCAATTTCTCCCATTTGGA ACKSWCKWCCAMCWBSMCAWKTTMTCCCATTKDGA Direction: Forward Position #: 16 Overlap #: 20 Alignment: ACKSWCKWCCAMCWBCAHRTSDKRRHCCWTTSWDR ---------------GCCAATTTCTCCCATTTGGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 306 Combined Motif Original Motif Original Motif ACKSWCKWCCAMCWBSMCAWKTTMTCCCATTKDGA GACATGAGCTGGCGCTTG ACKSWCKWCCAMCWBGACATGWKCTSSCRYTTGGA Direction: Forward Position #: 16 Overlap #: 18 Alignment: ACKSWCKWCCAMCWBSMCAWKTTMTCCCATTKDGA ---------------GACATGAGCTGGCGCTTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 6 Combined Motif Original Motif Original Motif ACKSWCKWCCAMCWBGACATGWKCTSSCRYTTGGA GCTCACTGCAASCTC ACKSWCKWCCAMCWBGMYMWBTGCWRSCWCTTGGA Direction: Forward Position #: 16 Overlap #: 15 Alignment: ACKSWCKWCCAMCWBGACATGWKCTSSCRYTTGGA ---------------GCTCACTGCAASCTC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 171 Combined Motif Reverse Complement Original Motif TCCAAGWGSKWGCABWYMRCBWGRTGGWRGWSRGT AAAAGTCCACAGTCCAAAGT TCCAAGWGSKWGCABAHAASTHSAYRGTCSAAAGT Direction: Forward Position #: 16 Overlap #: 20 Alignment: TCCAAGWGSKWGCABWYMRCBWGRTGGWRGWSRGT ---------------AAAAGTCCACAGTCCAAAGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 291 Combined Motif Original Motif Reverse Complement TCCAAGWGSKWGCABAHAASTHSAYRGTCSAAAGT TAMGACCTCAGGTCCTCAG TCCAAGWGSKWGCABWAMRRYCYMMGGTCCWCAGT Direction: Forward Position #: 16 Overlap #: 19 Alignment: TCCAAGWGSKWGCABAHAASTHSAYRGTCSAAAGT ---------------TAMGACCTCAGGTCCTCAG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 231 Combined Motif Reverse Complement Reverse Complement ACTGWGGACCYRMGKKMYTWBTGCWRSCWCTTGGA MGAAGGGACTTGCCTTGT ACTGWGGACCYRMGKHSWWRGKRCTDGCCYTKKGA Direction: Forward Position #: 16 Overlap #: 18 Alignment: ACTGWGGACCYRMGKKMYTWBTGCWRSCWCTTGGA ---------------MGAAGGGACTTGCCTTGT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 170 Combined Motif Reverse Complement Original Motif TCRYAMGGCDAGKYCMWWSHYCYMMGGTCCWCAGT AATCAACCCTGGYRATCAAT TCRYAMGGCDAGKYCAATCAMCYCTGGYSMTCART Direction: Forward Position #: 16 Overlap #: 20 Alignment: TCRYAMGGCDAGKYCMWWSHYCYMMGGTCCWCAGT ---------------AATCAACCCTGGYRATCAAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 262 Reverse Complement Reverse Complement AMTGAYSMCCAGKGYTGATTGKRCTDGCCYTKKGA GACAGGAGATTAACACTGAG GACAGGARATKAHCACYRRGGYTGATTGKRCTDGCCYTKKGA Direction: Forward Position #: 8 Overlap #: 13 Alignment: -------AMTGAYSMCCAGKGYTGATTGKRCTDGCCYTKKGA GACAGGAGATTAACACTGAG---------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 63 Combined Motif Reverse Complement Reverse Complement TCRYAMGGCDAGKYCAATCAMCCKMMGTGHTRATMTCCTGTC AAAMAMMKMATGTTCTCACT TCRYAMGGCDAGKYCAATCAAMCWMMGYRTKWWYTYMCTGTC Direction: Forward Position #: 20 Overlap #: 20 Alignment: TCRYAMGGCDAGKYCAATCAMCCKMMGTGHTRATMTCCTGTC -------------------AAAMAMMKMATGTTCTCACT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 34 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 34 Motif 314 Reverse Complement Reverse Complement TGTGCGTCC ATGTGCGTTCC CTGTGCGTYCA Direction: Backward Position #: 2 Overlap #: 9 Alignment: -TGTGCGTCC- ATGTGCGTTCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 87 Original Motif Original Motif CTGTGCGTYCA CATGTGTGTCC CWKKKSKKTCM Direction: Forward Position #: 1 Overlap #: 11 Alignment: CTGTGCGTYCA CATGTGTGTCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 206 Original Motif Original Motif CWKKKSKKTCM GCTCCWGTGYGKCC GCTCCWGKGBGKYCM Direction: Forward Position #: 5 Overlap #: 10 Alignment: ----CWKKKSKKTCM GCTCCWGTGYGKCC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 215 Combined Motif Original Motif Reverse Complement GCTCCWGKGBGKYCM GGGRSCACAGGAGCD GCTCCDGKRSSRCMSGAGCD Direction: Forward Position #: 6 Overlap #: 10 Alignment: GCTCCWGKGBGKYCM----- -----GGGRSCACAGGAGCD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 120 Combined Motif Original Motif Reverse Complement GCTCCDGKRSSRCMSGAGCD GGGASCACATGG GCTCCDGKGGGACCASAKSG Direction: Forward Position #: 9 Overlap #: 12 Alignment: GCTCCDGKRSSRCMSGAGCD --------GGGASCACATGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 15 Combined Motif Reverse Complement Reverse Complement CSYTSTGGTCCCYCHGGAGC TCACKMGGGAAGCGCAAG CSYTSTGGTCMCBCBGGARSCGCAAG Direction: Forward Position #: 9 Overlap #: 12 Alignment: CSYTSTGGTCCCYCHGGAGC------ --------TCACKMGGGAAGCGCAAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 240 Combined Motif Original Motif Original Motif CSYTSTGGTCMCBCBGGARSCGCAAG ATGTGCWGTCCC CSYTSTGGTCMMTSTGSAGBCSCAAG Direction: Forward Position #: 12 Overlap #: 12 Alignment: CSYTSTGGTCMCBCBGGARSCGCAAG -----------ATGTGCWGTCCC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 51 Combined Motif Original Motif Original Motif CSYTSTGGTCMMTSTGSAGBCSCAAG GTGGGTGCGCGCA CSYTSTGGTCMGTGKGYRSGCGCAAG Direction: Forward Position #: 12 Overlap #: 13 Alignment: CSYTSTGGTCMMTSTGSAGBCSCAAG -----------GTGGGTGCGCGCA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 112 Combined Motif Reverse Complement Original Motif CTTGCGCSMMCYCACYGACCASAKSG GCTGTGTGACCTTGGGCAAG CTTGCGCSMMCBCWSTGWSVMCWTGGGCAAG Direction: Forward Position #: 12 Overlap #: 15 Alignment: CTTGCGCSMMCYCACYGACCASAKSG----- -----------GCTGTGTGACCTTGGGCAAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 193 Combined Motif Reverse Complement Original Motif CTTGCCCAWGRBSWCASWGBGYRSGCGCAAG ATACAATGGGGGTACAGRC CTTGCCCAWGRBSAYACARTGGGGGYRCARRC Direction: Forward Position #: 14 Overlap #: 18 Alignment: CTTGCCCAWGRBSWCASWGBGYRSGCGCAAG- -------------ATACAATGGGGGTACAGRC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 144 Combined Motif Reverse Complement Reverse Complement GMKTGKKCCCCCAKTGTKTSVMCWTGGGCAAG GGGCTCCCACAGTGCAGCGG GMKTGKKCCCCCAKKGKBTCCCMCWGKGCARSGG Direction: Forward Position #: 15 Overlap #: 18 Alignment: GMKTGKKCCCCCAKTGTKTSVMCWTGGGCAAG-- --------------GGGCTCCCACAGTGCAGCGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 203 Combined Motif Original Motif Reverse Complement GMKTGKKCCCCCAKKGKBTCCCMCWGKGCARSGG GGACGCCATGG GMKTGKKCCCCCAKKGGVYGCCATGGKGCARSGG Direction: Forward Position #: 16 Overlap #: 11 Alignment: GMKTGKKCCCCCAKKGKBTCCCMCWGKGCARSGG ---------------GGACGCCATGG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 42 Combined Motif Original Motif Original Motif GMKTGKKCCCCCAKKGGVYGCCATGGKGCARSGG CTCTGCCCGGCCGC GMKTGKKCCCCCAKKSKCTGCCMBGSYGCARSGG Direction: Forward Position #: 16 Overlap #: 14 Alignment: GMKTGKKCCCCCAKKGGVYGCCATGGKGCARSGG ---------------CTCTGCCCGGCCGC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 209 Combined Motif Reverse Complement Reverse Complement CCSMTGCKSCBRGGCAGRSYRTGGGGGYRCARRC ATGGGCTGACAG CCSMTGCKSCBRGGCAKGGBMTGRSRGYRCARRC Direction: Forward Position #: 16 Overlap #: 12 Alignment: CCSMTGCKSCBRGGCAGRSYRTGGGGGYRCARRC ---------------ATGGGCTGACAG------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 50 Combined Motif Reverse Complement Reverse Complement GMKTGKKCKSKCARBCCRTGCCMBGSYGCARSGG GCCCTCACATC GMKTGKKCKSKCARBSCMYKCMCAKCYGCARSGG Direction: Forward Position #: 16 Overlap #: 11 Alignment: GMKTGKKCKSKCARBCCRTGCCMBGSYGCARSGG ---------------GCCCTCACATC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 284 Combined Motif Original Motif Reverse Complement GMKTGKKCKSKCARBSCMYKCMCAKCYGCARSGG TCAATGGGCTCCCAAATG GMKTGKKCKSKCARBBCAWTSVSVTCCSMAAYGG Direction: Forward Position #: 16 Overlap #: 18 Alignment: GMKTGKKCKSKCARBSCMYKCMCAKCYGCARSGG ---------------TCAATGGGCTCCCAAATG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 205 Combined Motif Original Motif Original Motif GMKTGKKCKSKCARBBCAWTSVSVTCCSMAAYGG CATCTGGCAGCCCA GMKTGKKCKSKCARBCMWCTGGCAKCCCMAAYGG Direction: Forward Position #: 16 Overlap #: 14 Alignment: GMKTGKKCKSKCARBBCAWTSVSVTCCSMAAYGG ---------------CATCTGGCAGCCCA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 84 Combined Motif Original Motif Original Motif GMKTGKKCKSKCARBCMWCTGGCAKCCCMAAYGG CTGGGTCCCCCAGCAGTGCC GMKTGKKCKSKCARBCHGSKKSCMSCMSCARTGSC Direction: Forward Position #: 16 Overlap #: 19 Alignment: GMKTGKKCKSKCARBCMWCTGGCAKCCCMAAYGG- ---------------CTGGGTCCCCCAGCAGTGCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 159 Combined Motif Reverse Complement Reverse Complement GSCAMTGSYGSRGSRYSCHGBMTGRSRGYRCARRC TGCTCACACAAAGCCTGT GSCAMTGSYGSRGSRTGCTSACWSAAAGCCYRTRC Direction: Forward Position #: 16 Overlap #: 18 Alignment: GSCAMTGSYGSRGSRYSCHGBMTGRSRGYRCARRC ---------------TGCTCACACAAAGCCTGT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 187 Combined Motif Original Motif Reverse Complement GSCAMTGSYGSRGSRTGCTSACWSAAAGCCYRTRC AACTGAGGCTCAGAGA GSCAMTGSYGSRGSRHRCTGASDCWMAGMGWRTRC Direction: Forward Position #: 16 Overlap #: 16 Alignment: GSCAMTGSYGSRGSRTGCTSACWSAAAGCCYRTRC ---------------AACTGAGGCTCAGAGA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 150 Combined Motif Original Motif Original Motif GSCAMTGSYGSRGSRHRCTGASDCWMAGMGWRTRC ATTGCTAGCACA GSCAMTGSYGSRGSRADYKSWAGCACAGMGWRTRC Direction: Forward Position #: 16 Overlap #: 12 Alignment: GSCAMTGSYGSRGSRHRCTGASDCWMAGMGWRTRC ---------------ATTGCTAGCACA-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 289 Combined Motif Reverse Complement Reverse Complement GMAKWCYCTGTGCTWSYMDTKSCMSCMSCARTGSC TTTGGTGCACCCATCA GMAKWCYCTGTGCTWKTTGBTGCACCMRYMATGSC Direction: Forward Position #: 16 Overlap #: 16 Alignment: GMAKWCYCTGTGCTWSYMDTKSCMSCMSCARTGSC ---------------TTTGGTGCACCCATCA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 265 Combined Motif Original Motif Original Motif GMAKWCYCTGTGCTWKTTGBTGCACCMRYMATGSC GCGCATGCGCA GMAKWCYCTGTGCTWGYDSATGCRCMMRYMATGSC Direction: Forward Position #: 16 Overlap #: 11 Alignment: GMAKWCYCTGTGCTWKTTGBTGCACCMRYMATGSC ---------------GCGCATGCGCA--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 268 Combined Motif Reverse Complement Original Motif GSCATRMKRRGMGCATSHKCWAGCACAGMGWRTRC ATAGTGAGACC GSCATRMKRRGMGCAATAGYGAGMMCAGMGWRTRC Direction: Forward Position #: 16 Overlap #: 11 Alignment: GSCATRMKRRGMGCATSHKCWAGCACAGMGWRTRC ---------------ATAGTGAGACC--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 61 Combined Motif Original Motif Reverse Complement GSCATRMKRRGMGCAATAGYGAGMMCAGMGWRTRC TGGCTTCACCCAGTGGATCC GSCATRMKRRGMGCATGRSTTMRCCCAGTGDATSC Direction: Forward Position #: 16 Overlap #: 20 Alignment: GSCATRMKRRGMGCAATAGYGAGMMCAGMGWRTRC ---------------TGGCTTCACCCAGTGGATCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 17 Combined Motif Reverse Complement Reverse Complement GSATHCACTGGGKRAASMCATGCRCMMRYMATGSC TGHCCTGCKCCCACTGTCT GSATHCACTGGGKRAWGHCMTGCGCCCACTRTSBC Direction: Forward Position #: 16 Overlap #: 19 Alignment: GSATHCACTGGGKRAASMCATGCRCMMRYMATGSC ---------------TGHCCTGCKCCCACTGTCT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 180 Combined Motif Reverse Complement Reverse Complement GVSAMAGTGGGCGCARGDCWTMRCCCAGTGDATSC TGCGCATGCGCA GVSAMAGTGGGCGCADGCSCWHGCSCAGTGDATSC Direction: Forward Position #: 16 Overlap #: 12 Alignment: GVSAMAGTGGGCGCARGDCWTMRCCCAGTGDATSC ---------------TGCGCATGCGCA-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 245 Combined Motif Reverse Complement Original Motif GSATHCACTGSGCHWGSGCDTGCGCCCACTRTSBC CAGACTGCCTCCTCAA GSATHCACTGSGCHWSMGMVTGCSYCCWCAATSBC Direction: Forward Position #: 16 Overlap #: 16 Alignment: GSATHCACTGSGCHWGSGCDTGCGCCCACTRTSBC ---------------CAGACTGCCTCCTCAA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 293 Combined Motif Original Motif Original Motif GSATHCACTGSGCHWSMGMVTGCSYCCWCAATSBC CTGACTGGGAGACACCTCCC GSATHCACTGSGCHWCHGACTGSGHSMHMMMTCCC Direction: Forward Position #: 16 Overlap #: 20 Alignment: GSATHCACTGSGCHWSMGMVTGCSYCCWCAATSBC ---------------CTGACTGGGAGACACCTCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 312 Combined Motif Original Motif Reverse Complement GSATHCACTGSGCHWCHGACTGSGHSMHMMMTCCC CCCMKGGCACCCTCAGTCCT GSATHCACTGSGCHWCCSMBKGCRCCCTCAGTCCY Direction: Forward Position #: 16 Overlap #: 20 Alignment: GSATHCACTGSGCHWCHGACTGSGHSMHMMMTCCC ---------------CCCMKGGCACCCTCAGTCCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 304 Combined Motif Original Motif Reverse Complement GSATHCACTGSGCHWCCSMBKGCRCCCTCAGTCCY AGCAGYTTGGAAACACT GSATHCACTGSGCHWMSCAGBKYGSMMWCACTCCY Direction: Forward Position #: 16 Overlap #: 17 Alignment: GSATHCACTGSGCHWCCSMBKGCRCCCTCAGTCCY ---------------AGCAGYTTGGAAACACT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 329 Combined Motif Original Motif Original Motif GSATHCACTGSGCHWMSCAGBKYGSMMWCACTCCY GGGAGGGATATATTAGC GSATHCACTGSGCHWRGSAGGGADAHATYAGYCCY Direction: Forward Position #: 16 Overlap #: 17 Alignment: GSATHCACTGSGCHWMSCAGBKYGSMMWCACTCCY ---------------GGGAGGGATATATTAGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 143 Combined Motif Reverse Complement Original Motif MGGKCTMATHTDTCCCTSCMWHGCSCAGTGDATSC CTGCGTCGCTCAC MGGKCTMATHTDTCCCTGCGTCGCKCASTGDATSC Direction: Forward Position #: 16 Overlap #: 13 Alignment: MGGKCTMATHTDTCCCTSCMWHGCSCAGTGDATSC ---------------CTGCGTCGCTCAC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 5 Combined Motif Original Motif Original Motif MGGKCTMATHTDTCCCTGCGTCGCKCASTGDATSC CCTCRGCCTCC MGGKCTMATHTDTCCCYKCRKCSYCCASTGDATSC Direction: Forward Position #: 16 Overlap #: 11 Alignment: MGGKCTMATHTDTCCCTGCGTCGCKCASTGDATSC ---------------CCTCRGCCTCC--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 350 Combined Motif Reverse Complement Reverse Complement GSATHCASTGGMSGYMGRKGGGADAHATYAGYCCY TGCTGGAGGTCCACTCCAGA GSATHCASTGGMSGYHGMTGGRRGWCMWCWSCMSW Direction: Forward Position #: 16 Overlap #: 20 Alignment: GSATHCASTGGMSGYMGRKGGGADAHATYAGYCCY ---------------TGCTGGAGGTCCACTCCAGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 165 Combined Motif Original Motif Reverse Complement GSATHCASTGGMSGYHGMTGGRRGWCMWCWSCMSW AGCTCMKCCTCCTGTCAGAT GSATHCASTGGMSGYAGCTSVDCSTCCTSTCMVRT Direction: Forward Position #: 16 Overlap #: 20 Alignment: GSATHCASTGGMSGYHGMTGGRRGWCMWCWSCMSW ---------------AGCTCMKCCTCCTGTCAGAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 29 Combined Motif Original Motif Reverse Complement GSATHCASTGGMSGYAGCTSVDCSTCCTSTCMVRT MGTCTMKCTCTGTKGCCCAG GSATHCASTGGMSGYAGYYTVKCTYYSTKKCCCAK Direction: Forward Position #: 16 Overlap #: 20 Alignment: GSATHCASTGGMSGYAGCTSVDCSTCCTSTCMVRT ---------------MGTCTMKCTCTGTKGCCCAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 108 Combined Motif Reverse Complement Original Motif YTGGGRYASMMAGYVAKMCTKCSYCCASTGDATSC CGAGCCTCCCCGAYGAGCGC YTGGGRYASMMAGYVMGASYSYCCCCRVYGARYGC Direction: Forward Position #: 16 Overlap #: 20 Alignment: YTGGGRYASMMAGYVAKMCTKCSYCCASTGDATSC ---------------CGAGCCTCCCCGAYGAGCGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 98 Combined Motif Original Motif Reverse Complement YTGGGRYASMMAGYVMGASYSYCCCCRVYGARYGC CCCACGCCCACCCGGAACT YTGGGRYASMMAGYVCSMVCGCCCMCMMBGAACKC Direction: Forward Position #: 16 Overlap #: 19 Alignment: YTGGGRYASMMAGYVMGASYSYCCCCRVYGARYGC ---------------CCCACGCCCACCCGGAACT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 105 Combined Motif Original Motif Original Motif YTGGGRYASMMAGYVCSMVCGCCCMCMMBGAACKC GCCTCTCCCTCCACACCTCC YTGGGRYASMMAGYVSCCTCTCCCTCCACRMMYCC Direction: Forward Position #: 16 Overlap #: 20 Alignment: YTGGGRYASMMAGYVCSMVCGCCCMCMMBGAACKC ---------------GCCTCTCCCTCCACACCTCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 326 Combined Motif Reverse Complement Reverse Complement GGMRRKGTGGAGGGAGAGGSVKCTYYSTKKCCCAK CCTTTGACTCCATGTC GGMRRKGTGGAGGGASMKKYGACTCCATGTCCCAK Direction: Forward Position #: 16 Overlap #: 16 Alignment: GGMRRKGTGGAGGGAGAGGSVKCTYYSTKKCCCAK ---------------CCTTTGACTCCATGTC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 213 Combined Motif Original Motif Reverse Complement GGMRRKGTGGAGGGASMKKYGACTCCATGTCCCAK TGTATTAGTCMMTT GGMRRKGTGGAGGGATSTDTKASTCCMTKTCCCAK Direction: Forward Position #: 16 Overlap #: 14 Alignment: GGMRRKGTGGAGGGASMKKYGACTCCATGTCCCAK ---------------TGTATTAGTCMMTT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 356 Combined Motif Reverse Complement Original Motif YTGGGARAYGGASTRAHASATCCCTCCACRMMYCC AATTAAAAGACACAGACTG YTGGGARAYGGASTRAAWTAWMMSWCMMMGACTSC Direction: Forward Position #: 16 Overlap #: 19 Alignment: YTGGGARAYGGASTRAHASATCCCTCCACRMMYCC ---------------AATTAAAAGACACAGACTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 31 Combined Motif Reverse Complement Reverse Complement GSAGTCYRYGWSYYWTAWTTKASTCCMTKTCCCAK CGGCTCGCGCACGG GSAGTCYRYGWSYYWYRGYTYRCKCMMKGTCCCAK Direction: Forward Position #: 16 Overlap #: 14 Alignment: GSAGTCYRYGWSYYWTAWTTKASTCCMTKTCCCAK ---------------CGGCTCGCGCACGG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 320 Combined Motif Original Motif Original Motif GSAGTCYRYGWSYYWYRGYTYRCKCMMKGTCCCAK CATCTGGAGCCCCA GSAGTCYRYGWSYYWCATCTGGMGCMCCDTCCCAK Direction: Forward Position #: 16 Overlap #: 14 Alignment: GSAGTCYRYGWSYYWYRGYTYRCKCMMKGTCCCAK ---------------CATCTGGAGCCCCA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 220 Combined Motif Reverse Complement Original Motif YTGGGAHGGRGCYCCAGATGWMMSWCMMMGACTSC TGCACTGCACCCAC YTGGGAHGGRGCYCCWGMDSTGCAHCCACGACTSC Direction: Forward Position #: 16 Overlap #: 14 Alignment: YTGGGAHGGRGCYCCAGATGWMMSWCMMMGACTSC ---------------TGCACTGCACCCAC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 277 Combined Motif Reverse Complement Original Motif GSAGTCGTGGDTGCASDRCWGGMGCMCCDTCCCAK GCCCTCACCAGAAGC GSAGTCGTGGDTGCAGHCCTCRCSMSMHGYCCCAK Direction: Forward Position #: 16 Overlap #: 15 Alignment: GSAGTCGTGGDTGCASDRCWGGMGCMCCDTCCCAK ---------------GCCCTCACCAGAAGC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 110 Combined Motif Original Motif Reverse Complement GSAGTCGTGGDTGCAGHCCTCRCSMSMHGYCCCAK TGGCACCCCAT GSAGTCGTGGDTGCAKGSCWCMCCAKMHGYCCCAK Direction: Forward Position #: 16 Overlap #: 11 Alignment: GSAGTCGTGGDTGCAGHCCTCRCSMSMHGYCCCAK ---------------TGGCACCCCAT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 56 Combined Motif Original Motif Original Motif GSAGTCGTGGDTGCAKGSCWCMCCAKMHGYCCCAK CRTGAGCCACYGYRCCYGGC GSAGTCGTGGDTGCAYRKSASCCMMYRHGCCCVRB Direction: Forward Position #: 16 Overlap #: 20 Alignment: GSAGTCGTGGDTGCAKGSCWCMCCAKMHGYCCCAK ---------------CRTGAGCCACYGYRCCYGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 311 Combined Motif Reverse Complement Reverse Complement BMVGGGCDKMRYGGSTSRMKTGCAHCCACGACTSC TTGGTAGGATCCGTGATGCC BMVGGGCDKMRYGGSTBGGTWGSATCCRYGAYKCC Direction: Forward Position #: 16 Overlap #: 20 Alignment: BMVGGGCDKMRYGGSTSRMKTGCAHCCACGACTSC ---------------TTGGTAGGATCCGTGATGCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 77 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 77 Motif 173 Reverse Complement Reverse Complement TTTCTTCCT TTGTTTCCTT TTTKYTTCCT Direction: Backward Position #: 2 Overlap #: 9 Alignment: TTTCTTCCT- TTGTTTCCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 234 Reverse Complement Original Motif AGGAAMYAAA AAGGAACAAACTCCRGACAC AAGGARSAAACWMMRGACAC Direction: Forward Position #: 5 Overlap #: 10 Alignment: ----AGGAAMYAAA------ AAGGAACAAACTCCRGACAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 327 Combined Motif Reverse Complement Reverse Complement GTGTCKYRWGTTTSKTCCTT GAAATTGACTTCCTCCT GTGTCKYRDRWWTTGWCYTYCTCCT Direction: Forward Position #: 9 Overlap #: 12 Alignment: GTGTCKYRWGTTTSKTCCTT----- --------GAAATTGACTTCCTCCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 54 Combined Motif Original Motif Reverse Complement GTGTCKYRDRWWTTGWCYTYCTCCT TTTCTTTTCCTT GTGTCKYRDRTTTBKTYTYYYTCCT Direction: Forward Position #: 11 Overlap #: 12 Alignment: GTGTCKYRDRWWTTGWCYTYCTCCT ----------TTTCTTTTCCTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 230 Combined Motif Reverse Complement Original Motif AGGAMKMAKARBAAAKHMMRGACAC AGAAAGGCATGTGAAAA AGGAMKMAKAAGAAAGBCAWGWSAMAA Direction: Forward Position #: 11 Overlap #: 15 Alignment: AGGAMKMAKARBAAAKHMMRGACAC-- ----------AGAAAGGCATGTGAAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 221 Combined Motif Reverse Complement Reverse Complement TTYTSWCWTGBCTTTCTTYTYYYTCCT GTGTCCCCTTCCTCCC TTYTSWCWTGBSTKTCYYCTTCCTCCY Direction: Forward Position #: 12 Overlap #: 16 Alignment: TTYTSWCWTGBCTTTCTTYTYYYTCCT -----------GTGTCCCCTTCCTCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 235 Combined Motif Reverse Complement Original Motif MGGAGGAAGKKGAYASBCAWGWSAMAA TCCAAATGGGAGAAATTGGC MGGAGGAAGKKKMCAAAYRGGAGAAAWTGGC Direction: Forward Position #: 12 Overlap #: 16 Alignment: MGGAGGAAGKKGAYASBCAWGWSAMAA---- -----------TCCAAATGGGAGAAATTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 214 Combined Motif Original Motif Original Motif MGGAGGAAGKKKMCAAAYRGGAGAAAWTGGC CTCAGGAATGGAAAACC MGGAGGAAGKKKMCWCABGARWGRAAAWSSC Direction: Forward Position #: 14 Overlap #: 17 Alignment: MGGAGGAAGKKKMCAAAYRGGAGAAAWTGGC -------------CTCAGGAATGGAAAACC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 26 Combined Motif Reverse Complement Original Motif GSSWTTTMCWKTCBTGWGRRYYCTTCCTCCY CTCCTGCCTCAGCCTCCCRA GSSWTTTMCWKTCCTSHKRVCTCWKCCTCCYRA Direction: Forward Position #: 14 Overlap #: 18 Alignment: GSSWTTTMCWKTCBTGWGRRYYCTTCCTCCY-- -------------CTCCTGCCTCAGCCTCCCRA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 313 Combined Motif Reverse Complement Reverse Complement TMKGGAGGYWGAGVMYDSAGGARWGRAAAWSSC MGCTGAGGCAGGAG TMKGGAGGYWGAGVMGBKRRGGMWGGARAWSSC Direction: Forward Position #: 15 Overlap #: 14 Alignment: TMKGGAGGYWGAGVMYDSAGGARWGRAAAWSSC --------------MGCTGAGGCAGGAG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 63 Combined Motif Reverse Complement Reverse Complement GSSWTKTCCWRCCKMRBCYVCTCWKCCTCCYRA AAAMAMMKMATGTTCTCACT GSSWTKTCCWRCCKAAACHMCKCATSYTCYCAMT Direction: Forward Position #: 15 Overlap #: 19 Alignment: GSSWTKTCCWRCCKMRBCYVCTCWKCCTCCYRA- --------------AAAMAMMKMATGTTCTCACT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 104 Combined Motif Reverse Complement Original Motif AYTGMGAMSATGRGRHGTTTRGGMWGGARAWSSC CAACATGGATGRARCTGGAG AYTGMGAMSATGRGRHRWYHWGGAWGRARMTGGMG Direction: Forward Position #: 16 Overlap #: 19 Alignment: AYTGMGAMSATGRGRHGTTTRGGMWGGARAWSSC- ---------------CAACATGGATGRARCTGGAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 79 Combined Motif Reverse Complement Reverse Complement CYCCAYKTMCWTCCWHKWMDMCKCATSYTCYCAMT ATTCATTCATT CYCCAYKTMCWTCCWATTCAYYCMWTSYTCYCAMT Direction: Forward Position #: 16 Overlap #: 11 Alignment: CYCCAYKTMCWTCCWHKWMDMCKCATSYTCYCAMT ---------------ATTCATTCATT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 178 Combined Motif Original Motif Original Motif CYCCAYKTMCWTCCWATTCAYYCMWTSYTCYCAMT ACTGTCTTCCACCTCCACAT CYCCAYKTMCWTCCWAYTSWCTTCYWCCTCYMMAT Direction: Forward Position #: 16 Overlap #: 20 Alignment: CYCCAYKTMCWTCCWATTCAYYCMWTSYTCYCAMT ---------------ACTGTCTTCCACCTCCACAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 7 Combined Motif Original Motif Reverse Complement CYCCAYKTMCWTCCWAYTSWCTTCYWCCTCYMMAT TTTYTWTTTTTTYTWGAGAC CYCCAYKTMCWTCCWWTTBTYTTYTTHYTYSAGAY Direction: Forward Position #: 16 Overlap #: 20 Alignment: CYCCAYKTMCWTCCWAYTSWCTTCYWCCTCYMMAT ---------------TTTYTWTTTTTTYTWGAGAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 41 Combined Motif Original Motif Reverse Complement CYCCAYKTMCWTCCWWTTBTYTTYTTHYTYSAGAY TTTTTTTMTTT CYCCAYKTMCWTCCWTTTHTTTHTTTHYTYSAGAY Direction: Forward Position #: 16 Overlap #: 11 Alignment: CYCCAYKTMCWTCCWWTTBTYTTYTTHYTYSAGAY ---------------TTTTTTTMTTT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 109 Combined Motif Original Motif Reverse Complement CYCCAYKTMCWTCCWTTTHTTTHTTTHYTYSAGAY TCTCTCTCTCTCTCTCTCTC CYCCAYKTMCWTCCWTYTHTYTCTYTCTYTCWSWC Direction: Forward Position #: 16 Overlap #: 20 Alignment: CYCCAYKTMCWTCCWTTTHTTTHTTTHYTYSAGAY ---------------TCTCTCTCTCTCTCTCTCTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 298 Combined Motif Original Motif Reverse Complement CYCCAYKTMCWTCCWTYTHTYTCTYTCTYTCWSWC GGTCCTCCTCTAT CYCCAYKTMCWTCCWKBTCYTYCTCTMTYTCWSWC Direction: Forward Position #: 16 Overlap #: 13 Alignment: CYCCAYKTMCWTCCWTYTHTYTCTYTCTYTCWSWC ---------------GGTCCTCCTCTAT------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 102 Combined Motif Original Motif Original Motif CYCCAYKTMCWTCCWKBTCYTYCTCTMTYTCWSWC CTCATTTAATCCTCACAAC CYCCAYKTMCWTCCWBTYMTTTMWYYMTYWCAVHC Direction: Forward Position #: 16 Overlap #: 19 Alignment: CYCCAYKTMCWTCCWKBTCYTYCTCTMTYTCWSWC ---------------CTCATTTAATCCTCACAAC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 245 Combined Motif Original Motif Original Motif CYCCAYKTMCWTCCWBTYMTTTMWYYMTYWCAVHC CAGACTGCCTCCTCAA CYCCAYKTMCWTCCWCWBAYTKCHTCCTCAMAVHC Direction: Forward Position #: 16 Overlap #: 16 Alignment: CYCCAYKTMCWTCCWBTYMTTTMWYYMTYWCAVHC ---------------CAGACTGCCTCCTCAA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 179 Combined Motif Reverse Complement Original Motif GHBTYTGAGGADGYAKTBWGWGGAWGRARMTGGMG AGGTCCTTCAGGAGGTATTC GHBTYTGAGGADGYARKGTSYKKMWGGAGVTRKHV Direction: Forward Position #: 16 Overlap #: 20 Alignment: GHBTYTGAGGADGYAKTBWGWGGAWGRARMTGGMG ---------------AGGTCCTTCAGGAGGTATTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 172 Combined Motif Reverse Complement Reverse Complement VHRKAVCTCCWRRRKSACYKTKCHTCCTCAMAVHC TTCTGTTTCT VHRKAVCTCCWRRRKKWCTGTKYCTCCTCAMAVHC Direction: Forward Position #: 16 Overlap #: 10 Alignment: VHRKAVCTCCWRRRKSACYKTKCHTCCTCAMAVHC ---------------TTCTGTTTCT---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 15 Combined Motif Reverse Complement Reverse Complement GHBTYTGAGGAGMRACAGWRYKKMWGGAGVTRKHV TCACKMGGGAAGCGCAAG GHBTYTGAGGAGMRATMRMDMKGSARGMGCWAGHV Direction: Forward Position #: 16 Overlap #: 18 Alignment: GHBTYTGAGGAGMRACAGWRYKKMWGGAGVTRKHV ---------------TCACKMGGGAAGCGCAAG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 190 Combined Motif Original Motif Original Motif GHBTYTGAGGAGMRATMRMDMKGSARGMGCWAGHV CAAAGGCATAAGAATGAT GHBTYTGAGGAGMRAYAAAGVSRKAAGARYRAKHV Direction: Forward Position #: 16 Overlap #: 18 Alignment: GHBTYTGAGGAGMRATMRMDMKGSARGMGCWAGHV ---------------CAAAGGCATAAGAATGAT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 211 Combined Motif Reverse Complement Reverse Complement VHRTMMKTCTTRKSVCTTTKTKYCTCCTCAMAVHC CGGCTTCATTCTTGAAGTC VHRTMMKTCTTRKSVCKKCTTYAYTCYTSAARHCC Direction: Forward Position #: 16 Overlap #: 19 Alignment: VHRTMMKTCTTRKSVCTTTKTKYCTCCTCAMAVHC ---------------CGGCTTCATTCTTGAAGTC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 62 Combined Motif Original Motif Original Motif VHRTMMKTCTTRKSVCKKCTTYAYTCYTSAARHCC AGGAACAGCTCCRGTCTAC VHRTMMKTCTTRKSVMGGMWYMRCTCCWGWMTACC Direction: Forward Position #: 16 Overlap #: 19 Alignment: VHRTMMKTCTTRKSVCKKCTTYAYTCYTSAARHCC ---------------AGGAACAGCTCCRGTCTAC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 161 Combined Motif Reverse Complement Original Motif GGTARWCWGGAGMYMWYCCYVSRKAAGARYRAKHV GAGGAGGRGGAGGDGGV GGTARWCWGGAGMYMGHSSWGSRGRAGRRBGAKHV Direction: Forward Position #: 16 Overlap #: 17 Alignment: GGTARWCWGGAGMYMWYCCYVSRKAAGARYRAKHV ---------------GAGGAGGRGGAGGDGGV--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 246 Combined Motif Original Motif Reverse Complement GGTARWCWGGAGMYMGHSSWGSRGRAGRRBGAKHV TCAGGAGTGAAGCTGC GGTARWCWGGAGMYMTCAGDRGTGAAGCWGSAKHV Direction: Forward Position #: 16 Overlap #: 16 Alignment: GGTARWCWGGAGMYMGHSSWGSRGRAGRRBGAKHV ---------------TCAGGAGTGAAGCTGC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 165 Combined Motif Original Motif Original Motif GGTARWCWGGAGMYMTCAGDRGTGAAGCWGSAKHV ATCTGACAGGAGGYRGAGCT GGTARWCWGGAGMYMWYCKGASAGRAGGHGGAGCT Direction: Forward Position #: 16 Overlap #: 20 Alignment: GGTARWCWGGAGMYMTCAGDRGTGAAGCWGSAKHV ---------------ATCTGACAGGAGGYRGAGCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 145 Combined Motif Reverse Complement Reverse Complement AGCTCCHCCTMCTSTCRGMWYMRCTCCWGWMTACC TYTGTCMTTTTGTGACTGGC AGCTCCHCCTMCTSTYDKVTCMKYTYSTGWCTRSC Direction: Forward Position #: 16 Overlap #: 20 Alignment: AGCTCCHCCTMCTSTCRGMWYMRCTCCWGWMTACC ---------------TYTGTCMTTTTGTGACTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 43 Combined Motif Reverse Complement Original Motif GSMAGWCASMAMRYGAVRDMASAGRAGGHGGAGCT GCCAGGCAGAGRGKCTCCT GSMAGWCASMAMRYGRCCAGRCAGARGGDSKMSYT Direction: Forward Position #: 16 Overlap #: 19 Alignment: GSMAGWCASMAMRYGAVRDMASAGRAGGHGGAGCT ---------------GCCAGGCAGAGRGKCTCCT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 310 Combined Motif Reverse Complement Reverse Complement AMSRRSDCCMTCTGMCTGGMCMKYTYSTGWCTRSC GGATTTMKGACTTGCATGGG AMSRRSDCCMTCTGMSKRKYYMKKWCTTGMMTGGS Direction: Forward Position #: 16 Overlap #: 20 Alignment: AMSRRSDCCMTCTGMCTGGMCMKYTYSTGWCTRSC ---------------GGATTTMKGACTTGCATGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 105 Combined Motif Original Motif Reverse Complement AMSRRSDCCMTCTGMSKRKYYMKKWCTTGMMTGGS GGAGGTGTGGAGGGAGAGGC AMSRRSDCCMTCTGMGGAGKTSTGGMGKGARWGGC Direction: Forward Position #: 16 Overlap #: 20 Alignment: AMSRRSDCCMTCTGMSKRKYYMKKWCTTGMMTGGS ---------------GGAGGTGTGGAGGGAGAGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 202 Combined Motif Original Motif Reverse Complement AMSRRSDCCMTCTGMGGAGKTSTGGMGKGARWGGC GAAACTGCTTTGTGATGTGT AMSRRSDCCMTCTGMGRARSTGYKTTGTGADDKGY Direction: Forward Position #: 16 Overlap #: 20 Alignment: AMSRRSDCCMTCTGMGGAGKTSTGGMGKGARWGGC ---------------GAAACTGCTTTGTGATGTGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 85 Combined Motif Reverse Complement Original Motif MCRHDTCACAARKCASKTKCRCAGARGGDSKMSYT CTAGACATAAAGGTTCTCCA MCRHDTCACAARKCACTWGMVMWRAAGGTTCYCCW Direction: Forward Position #: 16 Overlap #: 20 Alignment: MCRHDTCACAARKCASKTKCRCAGARGGDSKMSYT ---------------CTAGACATAAAGGTTCTCCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 64 Combined Motif Reverse Complement Original Motif WGGMGAACCTTKWYVYCWAGTGYKTTGTGADDKGY GAAGGCAGCTAAGGCCCGGY WGGMGAACCTTKWYVKMARGYRGYTARKGMYBGGY Direction: Forward Position #: 16 Overlap #: 20 Alignment: WGGMGAACCTTKWYVYCWAGTGYKTTGTGADDKGY ---------------GAAGGCAGCTAAGGCCCGGY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 114 Combined Motif Original Motif Original Motif WGGMGAACCTTKWYVKMARGYRGYTARKGMYBGGY CTACGTTCTC WGGMGAACCTTKWYVCTAVGTWCTYARKGMYBGGY Direction: Forward Position #: 16 Overlap #: 10 Alignment: WGGMGAACCTTKWYVKMARGYRGYTARKGMYBGGY ---------------CTACGTTCTC---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 339 Combined Motif Original Motif Reverse Complement WGGMGAACCTTKWYVCTAVGTWCTYARKGMYBGGY GCAGGAGGTGAG WGGMGAACCTTKWYVSYAGGWGGTSAGKGMYBGGY Direction: Forward Position #: 16 Overlap #: 12 Alignment: WGGMGAACCTTKWYVCTAVGTWCTYARKGMYBGGY ---------------GCAGGAGGTGAG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 278 Combined Motif Reverse Complement Original Motif MCCBKRCYCTSACCWCCTKSVMWRAAGGTTCYCCW ACTTTCAGGCATAACA MCCBKRCYCTSACCWMCTTYCAGGMAKRWCMYCCW Direction: Forward Position #: 16 Overlap #: 16 Alignment: MCCBKRCYCTSACCWCCTKSVMWRAAGGTTCYCCW ---------------ACTTTCAGGCATAACA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 168 Combined Motif Original Motif Reverse Complement MCCBKRCYCTSACCWMCTTYCAGGMAKRWCMYCCW GGTGGGAGAAATACCT MCCBKRCYCTSACCWVSTKKSAGRAATAMCTYCCW Direction: Forward Position #: 16 Overlap #: 16 Alignment: MCCBKRCYCTSACCWMCTTYCAGGMAKRWCMYCCW ---------------GGTGGGAGAAATACCT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 35 Combined Motif Reverse Complement Reverse Complement WGGMAGRTATTKCTSYYASVWGGTSAGKGMYBGGY AAGACGGGTGATTTCTG WGGMAGRTATTKCTSMARAMDGGTGAKTKCTGGGY Direction: Forward Position #: 16 Overlap #: 17 Alignment: WGGMAGRTATTKCTSYYASVWGGTSAGKGMYBGGY ---------------AAGACGGGTGATTTCTG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 216 Combined Motif Original Motif Original Motif WGGMAGRTATTKCTSMARAMDGGTGAKTKCTGGGY CAGAAATCACC WGGMAGRTATTKCTSCAGAAAKSWSMKTKCTGGGY Direction: Forward Position #: 16 Overlap #: 11 Alignment: WGGMAGRTATTKCTSMARAMDGGTGAKTKCTGGGY ---------------CAGAAATCACC--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 65 Combined Motif Original Motif Reverse Complement WGGMAGRTATTKCTSCAGAAAKSWSMKTKCTGGGY CGGCGCTGMGCTCGATTTCT WGGMAGRTATTKCTSCRGMRMTGHGCTYKMTKTST Direction: Forward Position #: 16 Overlap #: 20 Alignment: WGGMAGRTATTKCTSCAGAAAKSWSMKTKCTGGGY ---------------CGGCGCTGMGCTCGATTTCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 316 Combined Motif Original Motif Original Motif WGGMAGRTATTKCTSCRGMRMTGHGCTYKMTKTST CGGAAGTGACGT WGGMAGRTATTKCTSCGGAAGTGACSTYKMTKTST Direction: Forward Position #: 16 Overlap #: 12 Alignment: WGGMAGRTATTKCTSCRGMRMTGHGCTYKMTKTST ---------------CGGAAGTGACGT-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 260 Combined Motif Reverse Complement Reverse Complement ASARAYYKASGTCACTTCCGSAGRAATAMCTYCCW TTMGTCCCAGAGGGGCACC ASARAYYKASGTCACTTCBKCMSARAKRBSHACCW Direction: Forward Position #: 16 Overlap #: 19 Alignment: ASARAYYKASGTCACTTCCGSAGRAATAMCTYCCW ---------------TTMGTCCCAGAGGGGCACC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 268 Combined Motif Reverse Complement Original Motif WGGTDSBMYTMTSYGRBGAAGTGACSTYKMTKTST ATAGTGAGACC WGGTDSBMYTMTSYGATRRWGWGACCTYKMTKTST Direction: Forward Position #: 16 Overlap #: 11 Alignment: WGGTDSBMYTMTSYGRBGAAGTGACSTYKMTKTST ---------------ATAGTGAGACC--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 229 Combined Motif Reverse Complement Reverse Complement ASARAYYKAGGTCWCWMKATCMSARAKRBSHACCW GCGGCAGCAAGGC ASARAYYKAGGTCWCGMKRYMVCAARGSBSHACCW Direction: Forward Position #: 16 Overlap #: 13 Alignment: ASARAYYKAGGTCWCWMKATCMSARAKRBSHACCW ---------------GCGGCAGCAAGGC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 293 Combined Motif Original Motif Original Motif ASARAYYKAGGTCWCGMKRYMVCAARGSBSHACCW CTGACTGGGAGACACCTCCC ASARAYYKAGGTCWCSYGACHGSRAGRCACCWCCC Direction: Forward Position #: 16 Overlap #: 20 Alignment: ASARAYYKAGGTCWCGMKRYMVCAARGSBSHACCW ---------------CTGACTGGGAGACACCTCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 24 Combined Motif Reverse Complement Reverse Complement GGGWGGTGMCTMSCHGTCMSGWGACCTYKMTKTST TTTCTTTGACTRG GGGWGGTGMCTMSCHKTYCTKTGACYDGKMTKTST Direction: Forward Position #: 16 Overlap #: 13 Alignment: GGGWGGTGMCTMSCHGTCMSGWGACCTYKMTKTST ---------------TTTCTTTGACTRG------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 290 Combined Motif Reverse Complement Original Motif ASARAYYCDMGTCARAGMARHGSRAGRCACCWCCC TGATACCCAGGCAAACAG ASARAYYCDMGTCARWGAWAYSCARGVMAMCASCC Direction: Forward Position #: 16 Overlap #: 18 Alignment: ASARAYYCDMGTCARAGMARHGSRAGRCACCWCCC ---------------TGATACCCAGGCAAACAG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 54 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 54 Motif 7 Original Motif Original Motif AAGGAAAAGAAA GTCTCWAMAAAAAAWAMAAA AARRAAAAVAAAGTCTCWAM Direction: Backward Position #: 1 Overlap #: 12 Alignment: --------AAGGAAAAGAAA GTCTCWAMAAAAAAWAMAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 356 Combined Motif Reverse Complement Reverse Complement YTWGAGACTTTVTTTTKKTT CAGTCTGTGTCTTTTAATT YTWGAGACYWKTYTKTKTYTTTTAATT Direction: Forward Position #: 9 Overlap #: 12 Alignment: YTWGAGACTTTVTTTTKKTT------- --------CAGTCTGTGTCTTTTAATT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 214 Combined Motif Original Motif Reverse Complement YTWGAGACYWKTYTKTKTYTTTTAATT GGTTTTCCATTCCTGAG YTWGAGACYWKKBTTTTYCWTTYMWKWG Direction: Forward Position #: 12 Overlap #: 16 Alignment: YTWGAGACYWKTYTKTKTYTTTTAATT- -----------GGTTTTCCATTCCTGAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 24 Combined Motif Original Motif Reverse Complement YTWGAGACYWKKBTTTTYCWTTYMWKWG TTTCTTTGACTRG YTWGAGACYWKKTTTYTTYRWYTAKKWG Direction: Forward Position #: 13 Overlap #: 13 Alignment: YTWGAGACYWKKBTTTTYCWTTYMWKWG ------------TTTCTTTGACTRG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 99 Combined Motif Original Motif Reverse Complement YTWGAGACYWKKTTTYTTYRWYTAKKWG AATGAKATCATGTCYTTTGC YTWGAGACYWKKWWTBWKWTHHTRTBHKTTGC Direction: Forward Position #: 13 Overlap #: 16 Alignment: YTWGAGACYWKKTTTYTTYRWYTAKKWG---- ------------AATGAKATCATGTCYTTTGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 190 Combined Motif Original Motif Reverse Complement YTWGAGACYWKKWWTBWKWTHHTRTBHKTTGC ATCATTCTTATGCCTTTG YTWGAGACYWKKWWWTHWTTCTTATGCBTTKS Direction: Forward Position #: 15 Overlap #: 18 Alignment: YTWGAGACYWKKWWTBWKWTHHTRTBHKTTGC --------------ATCATTCTTATGCCTTTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 129 Combined Motif Reverse Complement Reverse Complement SRAABGCATAAGAAWDAWWWYRWKGTCTCWAM TGAGKCAATTAAACCTCTT SRAABGCATAAGAATGADTCVAWTRWMYCTMWT Direction: Forward Position #: 15 Overlap #: 18 Alignment: SRAABGCATAAGAAWDAWWWYRWKGTCTCWAM- --------------TGAGKCAATTAAACCTCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 109 Combined Motif Reverse Complement Reverse Complement AWYAGMRWKAWTBGAHTCATTCTTATGCBTTKS TCTCTCTCTCTCTCTCTCTC AWYAGMRWKAWTBGWCTCWYTCTYWYKCTYTBTC Direction: Forward Position #: 15 Overlap #: 19 Alignment: AWYAGMRWKAWTBGAHTCATTCTTATGCBTTKS- --------------TCTCTCTCTCTCTCTCTCTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 195 Combined Motif Reverse Complement Reverse Complement GABAMAGRKWMAGAMWGAGWCVAWTRWMYCTMWT ACCCAATWTGTAGTCTTTTA GABAMAGRKWMAGAMASMSAMTATKWAVTCTWTTA Direction: Forward Position #: 16 Overlap #: 19 Alignment: GABAMAGRKWMAGAMWGAGWCVAWTRWMYCTMWT- ---------------ACCCAATWTGTAGTCTTTTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 145 Combined Motif Reverse Complement Reverse Complement TAAWAGAVTWYATAYTSRSTYTCTYWYKCTYTBTC TYTGTCMTTTTGTGACTGGC TAAWAGAVTWYATAYTBTGTCHYTTTBTSDCTGKC Direction: Forward Position #: 16 Overlap #: 20 Alignment: TAAWAGAVTWYATAYTSRSTYTCTYWYKCTYTBTC ---------------TYTGTCMTTTTGTGACTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 237 Combined Motif Original Motif Reverse Complement TAAWAGAVTWYATAYTBTGTCHYTTTBTSDCTGKC TTKCCTTGGCTA TAAWAGAVTWYATAYTTKSYTTKKYTATSDCTGKC Direction: Forward Position #: 16 Overlap #: 12 Alignment: TAAWAGAVTWYATAYTBTGTCHYTTTBTSDCTGKC ---------------TTKCCTTGGCTA-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 234 Combined Motif Original Motif Reverse Complement TAAWAGAVTWYATAYTTKSYTTKKYTATSDCTGKC GTGTCKGGAGTTTGTTCCTT TAAWAGAVTWYATAYKTGYCTKGRSTDTGTYYSTY Direction: Forward Position #: 16 Overlap #: 20 Alignment: TAAWAGAVTWYATAYTTKSYTTKKYTATSDCTGKC ---------------GTGTCKGGAGTTTGTTCCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 117 Combined Motif Original Motif Reverse Complement TAAWAGAVTWYATAYKTGYCTKGRSTDTGTYYSTY TTYTTGTTGTTGTTGTT TAAWAGAVTWYATAYTTBTYKTKGTTKTKKTTSTY Direction: Forward Position #: 16 Overlap #: 17 Alignment: TAAWAGAVTWYATAYKTGYCTKGRSTDTGTYYSTY ---------------TTYTTGTTGTTGTTGTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 58 Combined Motif Reverse Complement Original Motif MASAAYRAYAACRAYMAVAAMTATKWAVTCTWTTA ATGGACAYTTRGGTTGHTTC MASAAYRAYAACRAYAWGRACWHTTDRGTYKHTTM Direction: Forward Position #: 16 Overlap #: 20 Alignment: MASAAYRAYAACRAYMAVAAMTATKWAVTCTWTTA ---------------ATGGACAYTTRGGTTGHTTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 328 Combined Motif Reverse Complement Reverse Complement YAAHYMACKDAAHWGTMCWTKTKGTTKTKKTTSTY KACATTGATTTTGTATC YAAHYMACKDAAHWGKACATTKWKTTTKTATYSTY Direction: Forward Position #: 16 Overlap #: 17 Alignment: YAAHYMACKDAAHWGTMCWTKTKGTTKTKKTTSTY ---------------KACATTGATTTTGTATC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 15 Combined Motif Reverse Complement Reverse Complement MASKATARAAARWYAATGTRCWHTTDRGTYKHTTM TCACKMGGGAAGCGCAAG MASKATARAAARWYAWYRYDMDGKWAGSKCAAKTM Direction: Forward Position #: 16 Overlap #: 18 Alignment: MASKATARAAARWYAATGTRCWHTTDRGTYKHTTM ---------------TCACKMGGGAAGCGCAAG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 235 Combined Motif Original Motif Original Motif MASKATARAAARWYAWYRYDMDGKWAGSKCAAKTM TCCAAATGGGAGAAATTGGC MASKATARAAARWYATCMMAATGGRAGADMWWGKC Direction: Forward Position #: 16 Overlap #: 20 Alignment: MASKATARAAARWYAWYRYDMDGKWAGSKCAAKTM ---------------TCCAAATGGGAGAAATTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 308 Combined Motif Original Motif Original Motif MASKATARAAARWYATCMMAATGGRAGADMWWGKC AAATTAGGCCAATTAATAAC MASKATARAAARWYAWMATWAGGSVARHTAATRAC Direction: Forward Position #: 16 Overlap #: 20 Alignment: MASKATARAAARWYATCMMAATGGRAGADMWWGKC ---------------AAATTAGGCCAATTAATAAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 161 Combined Motif Original Motif Original Motif MASKATARAAARWYAWMATWAGGSVARHTAATRAC GAGGAGGRGGAGGDGGV MASKATARAAARWYARARDARGRGGARDDRRDRAC Direction: Forward Position #: 16 Overlap #: 17 Alignment: MASKATARAAARWYAWMATWAGGSVARHTAATRAC ---------------GAGGAGGRGGAGGDGGV--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 184 Combined Motif Reverse Complement Original Motif GTKDMKDHMTCCMCKTHMTMTKWKTTTKTATYSTY ATATTGATGATCCTGACC GTKDMKDHMTCCMCKWTATTKRTGWTYYTGWCCTY Direction: Forward Position #: 16 Overlap #: 18 Alignment: GTKDMKDHMTCCMCKTHMTMTKWKTTTKTATYSTY ---------------ATATTGATGATCCTGACC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 274 Combined Motif Reverse Complement Original Motif MAGGWCAKKAWCAKYAATAWRGRGGARDDRRDRAC CTGGTCAAGGAAA MAGGWCAKKAWCAKYCWKRTCRAGGAAADRRDRAC Direction: Forward Position #: 16 Overlap #: 13 Alignment: MAGGWCAKKAWCAKYAATAWRGRGGARDDRRDRAC ---------------CTGGTCAAGGAAA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 327 Combined Motif Reverse Complement Original Motif GTKDMKDTTTCCTKGAMYWGKRTGWTYYTGWCCTY AGGAGGAAGTCAATTTC GTKDMKDTTTCCTKGAGBAGGAWGTYAHTKTCCTY Direction: Forward Position #: 16 Overlap #: 17 Alignment: GTKDMKDTTTCCTKGAMYWGKRTGWTYYTGWCCTY ---------------AGGAGGAAGTCAATTTC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 230 Combined Motif Original Motif Original Motif GTKDMKDTTTCCTKGAGBAGGAWGTYAHTKTCCTY AGAAAGGCATGTGAAAA GTKDMKDTTTCCTKGAGRARGRMRTKTGWAWMCTY Direction: Forward Position #: 16 Overlap #: 17 Alignment: GTKDMKDTTTCCTKGAGBAGGAWGTYAHTKTCCTY ---------------AGAAAGGCATGTGAAAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 106 Combined Motif Original Motif Original Motif GTKDMKDTTTCCTKGAGRARGRMRTKTGWAWMCTY ATTGGTGTATTTACAATCCC GTKDMKDTTTCCTKGAKTRGKGYATTTACAAWCYY Direction: Forward Position #: 16 Overlap #: 20 Alignment: GTKDMKDTTTCCTKGAGRARGRMRTKTGWAWMCTY ---------------ATTGGTGTATTTACAATCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 254 Combined Motif Original Motif Reverse Complement GTKDMKDTTTCCTKGAKTRGKGYATTTACAAWCYY ATAGGAATGCTTGTGATTTT GTKDMKDTTTCCTKGATAGGWRTRYTTRTRATYTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: GTKDMKDTTTCCTKGAKTRGKGYATTTACAAWCYY ---------------ATAGGAATGCTTGTGATTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 119 Combined Motif Original Motif Original Motif GTKDMKDTTTCCTKGATAGGWRTRYTTRTRATYTT AAGTCCAAGATCAAGGTGYY GTKDMKDTTTCCTKGAWRKSHAWGHTYAWGRTBYY Direction: Forward Position #: 16 Overlap #: 20 Alignment: GTKDMKDTTTCCTKGATAGGWRTRYTTRTRATYTT ---------------AAGTCCAAGATCAAGGTGYY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 248 Combined Motif Reverse Complement Original Motif MMBAKCWTKAHCWTDSRMWTCRAGGAAADRRDRAC TAATGGGTACAAA MMBAKCWTKAHCWTDTAATKGRWRSAAADRRDRAC Direction: Forward Position #: 16 Overlap #: 13 Alignment: MMBAKCWTKAHCWTDSRMWTCRAGGAAADRRDRAC ---------------TAATGGGTACAAA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 66 Combined Motif Original Motif Original Motif MMBAKCWTKAHCWTDTAATKGRWRSAAADRRDRAC ACACACAYACACACACACA MMBAKCWTKAHCWTDWHAYDSAHACAVAHABAHAC Direction: Forward Position #: 16 Overlap #: 19 Alignment: MMBAKCWTKAHCWTDTAATKGRWRSAAADRRDRAC ---------------ACACACAYACACACACACA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 336 Combined Motif Original Motif Original Motif MMBAKCWTKAHCWTDWHAYDSAHACAVAHABAHAC ATGTAACCAAAYACCACCTG MMBAKCWTKAHCWTDATRTAMMCAMAHACMAMCWS Direction: Forward Position #: 16 Overlap #: 20 Alignment: MMBAKCWTKAHCWTDWHAYDSAHACAVAHABAHAC ---------------ATGTAACCAAAYACCACCTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 217 Combined Motif Original Motif Reverse Complement MMBAKCWTKAHCWTDATRTAMMCAMAHACMAMCWS KGAGAACAGTAGGG MMBAKCWTKAHCWTDDKAKAACHRWAVRSMAMCWS Direction: Forward Position #: 16 Overlap #: 14 Alignment: MMBAKCWTKAHCWTDATRTAMMCAMAHACMAMCWS ---------------KGAGAACAGTAGGG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 55 Combined Motif Original Motif Original Motif MMBAKCWTKAHCWTDDKAKAACHRWAVRSMAMCWS ATGGAATAYTATTCAGCCAT MMBAKCWTKAHCWTDATRGAAYAVTABDCARCCWB Direction: Forward Position #: 16 Overlap #: 20 Alignment: MMBAKCWTKAHCWTDDKAKAACHRWAVRSMAMCWS ---------------ATGGAATAYTATTCAGCCAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 102 Combined Motif Reverse Complement Reverse Complement VWGGMTGDVTAVTMTTCMATHAWGHTYAWGRTBYY GTTGTGAGGATTAAATGAG VWGGMTGDVTAVTMTKYHRTBADGATTAARDKVBY Direction: Forward Position #: 16 Overlap #: 19 Alignment: VWGGMTGDVTAVTMTTCMATHAWGHTYAWGRTBYY ---------------GTTGTGAGGATTAAATGAG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 262 Combined Motif Original Motif Reverse Complement VWGGMTGDVTAVTMTKYHRTBADGATTAARDKVBY GACAGGAGATTAACACTGAG VWGGMTGDVTAVTMTGHCAKGAGRWTWAMAHTGAG Direction: Forward Position #: 16 Overlap #: 20 Alignment: VWGGMTGDVTAVTMTKYHRTBADGATTAARDKVBY ---------------GACAGGAGATTAACACTGAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 137 Combined Motif Reverse Complement Reverse Complement CTCADTRTWAWKCTCYTGHCAYAVTABDCARCCWB TWTACCTATGTAACAAACCT CTCADTRTWAWKCTCTWKACMTATKWAACAAMCMT Direction: Forward Position #: 16 Overlap #: 20 Alignment: CTCADTRTWAWKCTCYTGHCAYAVTABDCARCCWB ---------------TWTACCTATGTAACAAACCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 212 Combined Motif Original Motif Reverse Complement CTCADTRTWAWKCTCTWKACMTATKWAACAAMCMT MTTGACTACCCTA CTCADTRTWAWKCTCHTTDMCTACBHWACAAMCMT Direction: Forward Position #: 16 Overlap #: 13 Alignment: CTCADTRTWAWKCTCTWKACMTATKWAACAAMCMT ---------------MTTGACTACCCTA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 326 Combined Motif Reverse Complement Original Motif ARGYTTGTWDBGTAGYHAAHGAGRWTWAMAHTGAG GACATGGAGTCAAAGG ARGYTTGTWDBGTAGKAMATGRRGTYAAARVTGAG Direction: Forward Position #: 16 Overlap #: 16 Alignment: ARGYTTGTWDBGTAGYHAAHGAGRWTWAMAHTGAG ---------------GACATGGAGTCAAAGG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 139 Combined Motif Reverse Complement Original Motif CTCAVMTTTKACKMCATRTYCTACBHWACAAMCMT AGCCYCTGGYAACCAYYAWT CTCAVMTTTKACKMCAKVYYCTRSYAWMCAHHMHT Direction: Forward Position #: 16 Overlap #: 20 Alignment: CTCAVMTTTKACKMCATRTYCTACBHWACAAMCMT ---------------AGCCYCTGGYAACCAYYAWT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 202 Combined Motif Original Motif Original Motif CTCAVMTTTKACKMCAKVYYCTRSYAWMCAHHMHT ACACATCACAAAGCAGTTTC CTCAVMTTTKACKMCABACHYYACAAAVCAVTHTY Direction: Forward Position #: 16 Overlap #: 20 Alignment: CTCAVMTTTKACKMCAKVYYCTRSYAWMCAHHMHT ---------------ACACATCACAAAGCAGTTTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 86 Combined Motif Reverse Complement Original Motif KAHAVTGVTTTGTKMHGTBTGRRGTYAAARVTGAG AGTAGGTGCTCARTAAATRB KAHAVTGVTTTGTKMAGTRKGDRVTCAAWRAWDRB Direction: Forward Position #: 16 Overlap #: 20 Alignment: KAHAVTGVTTTGTKMHGTBTGRRGTYAAARVTGAG ---------------AGTAGGTGCTCARTAAATRB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 187 Combined Motif Original Motif Reverse Complement KAHAVTGVTTTGTKMAGTRKGDRVTCAAWRAWDRB AACTGAGGCTCAGAGA KAHAVTGVTTTGTKMARYDGRGGCTCARAGAWDRB Direction: Forward Position #: 16 Overlap #: 16 Alignment: KAHAVTGVTTTGTKMAGTRKGDRVTCAAWRAWDRB ---------------AACTGAGGCTCAGAGA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 196 Combined Motif Original Motif Reverse Complement KAHAVTGVTTTGTKMARYDGRGGCTCARAGAWDRB CAAGCCTSKGCAATGGCAGG KAHAVTGVTTTGTKMMAAGSMTGBKCAAWGRHDGG Direction: Forward Position #: 16 Overlap #: 20 Alignment: KAHAVTGVTTTGTKMARYDGRGGCTCARAGAWDRB ---------------CAAGCCTSKGCAATGGCAGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 64 Combined Motif Original Motif Original Motif KAHAVTGVTTTGTKMMAAGSMTGBKCAAWGRHDGG GAAGGCAGCTAAGGCCCGGY KAHAVTGVTTTGTKMSAAGGCWGCTMARKSVCRGB Direction: Forward Position #: 16 Overlap #: 20 Alignment: KAHAVTGVTTTGTKMMAAGSMTGBKCAAWGRHDGG ---------------GAAGGCAGCTAAGGCCCGGY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 213 Combined Motif Original Motif Reverse Complement KAHAVTGVTTTGTKMSAAGGCWGCTMARKSVCRGB TGTATTAGTCMMTT KAHAVTGVTTTGTKMKRWRKYAGYYMAKTSVCRGB Direction: Forward Position #: 16 Overlap #: 14 Alignment: KAHAVTGVTTTGTKMSAAGGCWGCTMARKSVCRGB ---------------TGTATTAGTCMMTT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 178 Combined Motif Original Motif Original Motif KAHAVTGVTTTGTKMKRWRKYAGYYMAKTSVCRGB ACTGTCTTCCACCTCCACAT KAHAVTGVTTTGTKMWSTGTCWKYCAMYTCCMVRT Direction: Forward Position #: 16 Overlap #: 20 Alignment: KAHAVTGVTTTGTKMKRWRKYAGYYMAKTSVCRGB ---------------ACTGTCTTCCACCTCCACAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 221 Combined Motif Original Motif Reverse Complement KAHAVTGVTTTGTKMWSTGTCWKYCAMYTCCMVRT GTGTCCCCTTCCTCCC KAHAVTGVTTTGTKMDBKKYCYCTYMCTYCCMVRT Direction: Forward Position #: 16 Overlap #: 16 Alignment: KAHAVTGVTTTGTKMWSTGTCWKYCAMYTCCMVRT ---------------GTGTCCCCTTCCTCCC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 104 Combined Motif Reverse Complement Reverse Complement AKVYGGKAGRMAGKGKRYVHYYACAAAVCAVTHTY CTCCAGKTMCATCCATGTTG AKVYGGKAGRMAGKGBTCMABBWCMAWCCABKTTB Direction: Forward Position #: 16 Overlap #: 20 Alignment: AKVYGGKAGRMAGKGKRYVHYYACAAAVCAVTHTY ---------------CTCCAGKTMCATCCATGTTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 21 Combined Motif Original Motif Original Motif AKVYGGKAGRMAGKGBTCMABBWCMAWCCABKTTB GCCGTTTKTTAAGCCCGTY AKVYGGKAGRMAGKGGYCVWTTDYYAAGCMBGTYB Direction: Forward Position #: 16 Overlap #: 19 Alignment: AKVYGGKAGRMAGKGBTCMABBWCMAWCCABKTTB ---------------GCCGTTTKTTAAGCCCGTY- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 115 Combined Motif Reverse Complement Original Motif BMACBRGCTTMKDAAWVGKCCYCTYMCTYCCMVRT ATGATCCAGCAATYCCACTH BMACBRGCTTMKDAAATGAYCCHKYMMTYCCACDH Direction: Forward Position #: 16 Overlap #: 20 Alignment: BMACBRGCTTMKDAAWVGKCCYCTYMCTYCCMVRT ---------------ATGATCCAGCAATYCCACTH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 29 Combined Motif Original Motif Reverse Complement BMACBRGCTTMKDAAATGAYCCHKYMMTYCCACDH MGTCTMKCTCTGTKGCCCAG BMACBRGCTTMKDAAAKKMTCBCTCWVTBSCMCAG Direction: Forward Position #: 16 Overlap #: 20 Alignment: BMACBRGCTTMKDAAATGAYCCHKYMMTYCCACDH ---------------MGTCTMKCTCTGTKGCCCAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 19 Combined Motif Reverse Complement Reverse Complement CTGRGSVAVWGAGBGARRYTTTDYYAAGCMBGTYB MGGGATATAATCTCCTGGTG CTGRGSVAVWGAGBGMGGGWTWTAWWMKCCTGKTG Direction: Forward Position #: 16 Overlap #: 20 Alignment: CTGRGSVAVWGAGBGARRYTTTDYYAAGCMBGTYB ---------------MGGGATATAATCTCCTGGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 90 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 90 Motif 193 Reverse Complement Original Motif KGCAATGGGG ATACAATGGGGGTACAGRC GTACAGRCTRCAATGGGGA Direction: Backward Position #: 9 Overlap #: 10 Alignment: -KGCAATGGGG-------- ATACAATGGGGGTACAGRC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 196 Reverse Complement Original Motif TCCCCATTGKAGKCTGTAC CCTGCCATTGCYSAGGCTTG CCTGCCATTSCCCAKKSTWGKCTGTAC Direction: Forward Position #: 9 Overlap #: 12 Alignment: --------TCCCCATTGKAGKCTGTAC CCTGCCATTGCYSAGGCTTG------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 247 Combined Motif Reverse Complement Reverse Complement GTACAGRCWASRRTGGGSAATGGCAGG GKGGCAGTGAGGC GTACAGRCWASGDKGSRGWRWGGCAGG Direction: Forward Position #: 12 Overlap #: 13 Alignment: GTACAGRCWASRRTGGGSAATGGCAGG -----------GKGGCAGTGAGGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 3 Combined Motif Original Motif Original Motif GTACAGRCWASGDKGSRGWRWGGCAGG GCTGGAGTGCAGTGGCRYGA GTACAGRCWASGBTGGAGTGHRGYRGSRYGA Direction: Forward Position #: 12 Overlap #: 16 Alignment: GTACAGRCWASGDKGSRGWRWGGCAGG---- -----------GCTGGAGTGCAGTGGCRYGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 136 Combined Motif Original Motif Reverse Complement GTACAGRCWASGBTGGAGTGHRGYRGSRYGA CCCCGGGCAGTGAGGG GTACAGRCWASGBYSSMGKGCAGTGRGGSGA Direction: Forward Position #: 14 Overlap #: 16 Alignment: GTACAGRCWASGBTGGAGTGHRGYRGSRYGA -------------CCCCGGGCAGTGAGGG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 144 Combined Motif Reverse Complement Original Motif TCSCCKCACTGCYCYSSKBCSTWGKCTGTAC CCGCTGCACTGTGGGAGCCC TCSCCKCACTGCYCCGCTGCAYTGTSKGWRCCC Direction: Forward Position #: 14 Overlap #: 18 Alignment: TCSCCKCACTGCYCYSSKBCSTWGKCTGTAC-- -------------CCGCTGCACTGTGGGAGCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 176 Combined Motif Original Motif Reverse Complement TCSCCKCACTGCYCCGCTGCAYTGTSKGWRCCC AACAACASACACTGGGGCCT TCSCCKCACTGCYCMRCWRCACWSWCKGDGSCCT Direction: Forward Position #: 15 Overlap #: 19 Alignment: TCSCCKCACTGCYCCGCTGCAYTGTSKGWRCCC- --------------AACAACASACACTGGGGCCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 232 Combined Motif Original Motif Original Motif TCSCCKCACTGCYCMRCWRCACWSWCKGDGSCCT AGTTGTAATTGGGAGACTT TCSCCKCACTGCYCMASTTSWMABTSGGAGACYT Direction: Forward Position #: 16 Overlap #: 19 Alignment: TCSCCKCACTGCYCMRCWRCACWSWCKGDGSCCT ---------------AGTTGTAATTGGGAGACTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 242 Combined Motif Original Motif Reverse Complement TCSCCKCACTGCYCMASTTSWMABTSGGAGACYT CMCAGTTCACAATAGGGTT TCSCCKCACTGCYCMMVYWGTTMAYRDKAGGSTT Direction: Forward Position #: 16 Overlap #: 19 Alignment: TCSCCKCACTGCYCMASTTSWMABTSGGAGACYT ---------------CMCAGTTCACAATAGGGTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 36 Combined Motif Original Motif Reverse Complement TCSCCKCACTGCYCMMVYWGTTMAYRDKAGGSTT CGCCCATCGTCTGGGATGT TCSCCKCACTGCYCMCGCMSWTCDTCTGRGAKKT Direction: Forward Position #: 16 Overlap #: 19 Alignment: TCSCCKCACTGCYCMMVYWGTTMAYRDKAGGSTT ---------------CGCCCATCGTCTGGGATGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 53 Combined Motif Original Motif Reverse Complement TCSCCKCACTGCYCMCGCMSWTCDTCTGRGAKKT CTTGGGTGGTCGATGGGAC TCSCCKCACTGCYCMCKYSGRTSGTCKRKGGGAY Direction: Forward Position #: 16 Overlap #: 19 Alignment: TCSCCKCACTGCYCMCGCMSWTCDTCTGRGAKKT ---------------CTTGGGTGGTCGATGGGAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 17 Combined Motif Reverse Complement Original Motif KTCCCRKYGACSAMCSMRGYGKGCAGTGRGGSGA AGACAGTGGGYGCAGGHCA KTCCCRKYGACSAMCVRASAGTGSRBKSAGGBSA Direction: Forward Position #: 16 Overlap #: 19 Alignment: KTCCCRKYGACSAMCSMRGYGKGCAGTGRGGSGA ---------------AGACAGTGGGYGCAGGHCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 14 Combined Motif Reverse Complement Original Motif TSBCCTSYBMSCACTSTMBGRTSGTCKRKGGGAY ACCTGGAAAATCGGGTCACT TSBCCTSYBMSCACTAYCTGGWARWYBRGGKSACT Direction: Forward Position #: 16 Overlap #: 19 Alignment: TSBCCTSYBMSCACTSTMBGRTSGTCKRKGGGAY- ---------------ACCTGGAAAATCGGGTCACT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 84 Combined Motif Reverse Complement Original Motif AGTSRCCMBMWKTWCCAGKTAGTGSRBKSAGGBSA CTGGGTCCCCCAGCAGTGCC AGTSRCCMBMWKTWCCWGGGTSYSCSAGCAGKGCM Direction: Forward Position #: 16 Overlap #: 20 Alignment: AGTSRCCMBMWKTWCCAGKTAGTGSRBKSAGGBSA ---------------CTGGGTCCCCCAGCAGTGCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 18 Combined Motif Reverse Complement Reverse Complement YGCRCTGCTSGSKSACCCWGGWARWYBRGGKSACT CCCYAATACTGCGCTTTTC YGCRCTGCTSGSKSACCCHRRTAMTGCGSKTTWCT Direction: Forward Position #: 16 Overlap #: 19 Alignment: YGCRCTGCTSGSKSACCCWGGWARWYBRGGKSACT ---------------CCCYAATACTGCGCTTTTC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 215 Combined Motif Reverse Complement Reverse Complement AGWAARSCGCARTAKKHGGGTSYSCSAGCAGKGCM GGGRSCACAGGAGCD AGWAARSCGCARTAKGGGRGYVCVSGAGCRGKGCM Direction: Forward Position #: 16 Overlap #: 15 Alignment: AGWAARSCGCARTAKKHGGGTSYSCSAGCAGKGCM ---------------GGGRSCACAGGAGCD----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 322 Combined Motif Original Motif Original Motif AGWAARSCGCARTAKGGGRGYVCVSGAGCRGKGCM AGGGCCTTTGCASWTGC AGWAARSCGCARTAKRGGGSCDYTGSASHDGYGCM Direction: Forward Position #: 16 Overlap #: 17 Alignment: AGWAARSCGCARTAKGGGRGYVCVSGAGCRGKGCM ---------------AGGGCCTTTGCASWTGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 23 Combined Motif Original Motif Reverse Complement AGWAARSCGCARTAKRGGGSCDYTGSASHDGYGCM ACTCCCTAGTGAGATGAACC AGWAARSCGCARTAKASKSCCTWKKGAGATGARCC Direction: Forward Position #: 16 Overlap #: 20 Alignment: AGWAARSCGCARTAKRGGGSCDYTGSASHDGYGCM ---------------ACTCCCTAGTGAGATGAACC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 13 Combined Motif Original Motif Original Motif AGWAARSCGCARTAKASKSCCTWKKGAGATGARCC AAGCAGGGCGAGGCATTGCC AGWAARSCGCARTAKAAGCMSGRBGRRGCWKHRCC Direction: Forward Position #: 16 Overlap #: 20 Alignment: AGWAARSCGCARTAKASKSCCTWKKGAGATGARCC ---------------AAGCAGGGCGAGGCATTGCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 166 Combined Motif Original Motif Original Motif AGWAARSCGCARTAKAAGCMSGRBGRRGCWKHRCC AAGGGACATTKGAG AGWAARSCGCARTAKAAGSRVSAYKDGRSWKHRCC Direction: Forward Position #: 16 Overlap #: 14 Alignment: AGWAARSCGCARTAKAAGCMSGRBGRRGCWKHRCC ---------------AAGGGACATTKGAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 235 Combined Motif Original Motif Original Motif AGWAARSCGCARTAKAAGSRVSAYKDGRSWKHRCC TCCAAATGGGAGAAATTGGC AGWAARSCGCARTAKWMSRAATRGGAGAAATTGSC Direction: Forward Position #: 16 Overlap #: 20 Alignment: AGWAARSCGCARTAKAAGSRVSAYKDGRSWKHRCC ---------------TCCAAATGGGAGAAATTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 111 Combined Motif Original Motif Reverse Complement AGWAARSCGCARTAKWMSRAATRGGAGAAATTGSC KGGGCDGAGGGGCTCCT AGWAARSCGCARTAKTVGGMRGAGGRGMWMYTGSC Direction: Forward Position #: 16 Overlap #: 17 Alignment: AGWAARSCGCARTAKWMSRAATRGGAGAAATTGSC ---------------KGGGCDGAGGGGCTCCT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 312 Combined Motif Original Motif Original Motif AGWAARSCGCARTAKTVGGMRGAGGRGMWMYTGSC AGGACTGAGGGTGCCYRGGG AGWAARSCGCARTAKAGGACTGAGGGKSYCYDGGS Direction: Forward Position #: 16 Overlap #: 20 Alignment: AGWAARSCGCARTAKTVGGMRGAGGRGMWMYTGSC ---------------AGGACTGAGGGTGCCYRGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 214 Combined Motif Original Motif Original Motif AGWAARSCGCARTAKAGGACTGAGGGKSYCYDGGS CTCAGGAATGGAAAACC AGWAARSCGCARTAKMKSASKRAKGGAAAMCBGGS Direction: Forward Position #: 16 Overlap #: 17 Alignment: AGWAARSCGCARTAKAGGACTGAGGGKSYCYDGGS ---------------CTCAGGAATGGAAAACC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 305 Combined Motif Reverse Complement Reverse Complement SCCBGYTTTCCRTKYSTSRRRTAMTGCGSKTTWCT GCTCTCAATTGGTCATT SCCBGYTTTCCRTKYGYKCTMWAHTGSKCDTTWCT Direction: Forward Position #: 16 Overlap #: 17 Alignment: SCCBGYTTTCCRTKYSTSRRRTAMTGCGSKTTWCT ---------------GCTCTCAATTGGTCATT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 292 Combined Motif Original Motif Reverse Complement SCCBGYTTTCCRTKYGYKCTMWAHTGSKCDTTWCT TTGTCCCACTGGAAGGTCTT SCCBGYTTTCCRTKYKTKYYCMACTGGWMGKTHYT Direction: Forward Position #: 16 Overlap #: 20 Alignment: SCCBGYTTTCCRTKYGYKCTMWAHTGSKCDTTWCT ---------------TTGTCCCACTGGAAGGTCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 191 Combined Motif Original Motif Reverse Complement SCCBGYTTTCCRTKYKTKYYCMACTGGWMGKTHYT GCTGCARTCTCGGCACTTT SCCBGYTTTCCRTKYGYTGCMVWCTSGGCRSTTTT Direction: Forward Position #: 16 Overlap #: 19 Alignment: SCCBGYTTTCCRTKYKTKYYCMACTGGWMGKTHYT ---------------GCTGCARTCTCGGCACTTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 288 Combined Motif Reverse Complement Reverse Complement AAAASKGCCSAGWBYGCAKCKRAKGGAAAMCBGGS GGGACTTGGG AAAASKGCCSAGWBYGGRDCTDRKGGAAAMCBGGS Direction: Forward Position #: 16 Overlap #: 10 Alignment: AAAASKGCCSAGWBYGCAKCKRAKGGAAAMCBGGS ---------------GGGACTTGGG---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 332 Combined Motif Reverse Complement Reverse Complement SCCBGYTTTCCYMDAGDMCCMVWCTSGGCRSTTTT GTTTAACCATTGAGGGCCAG SCCBGYTTTCCYMDAGTYTMACHMTKGASGGYYWK Direction: Forward Position #: 16 Overlap #: 20 Alignment: SCCBGYTTTCCYMDAGDMCCMVWCTSGGCRSTTTT ---------------GTTTAACCATTGAGGGCCAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 65 Combined Motif Reverse Complement Original Motif YWKKCCSTCRAYDGTYAMACTDRKGGAAAMCBGGS AGAAATCGAGCRCAGCGCCG YWKKCCSTCRAYDGTARAAMTBGRGSRMARCVSSG Direction: Forward Position #: 16 Overlap #: 20 Alignment: YWKKCCSTCRAYDGTYAMACTDRKGGAAAMCBGGS ---------------AGAAATCGAGCRCAGCGCCG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 206 Combined Motif Original Motif Reverse Complement YWKKCCSTCRAYDGTARAAMTBGRGSRMARCVSSG GGRCKCACWGGAGC YWKKCCSTCRAYDGTDGAMDYVSAGGASMRCVSSG Direction: Forward Position #: 16 Overlap #: 14 Alignment: YWKKCCSTCRAYDGTARAAMTBGRGSRMARCVSSG ---------------GGRCKCACWGGAGC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 331 Combined Motif Reverse Complement Original Motif CSSVGMRSTCCTSBKDYTCHACHMTKGASGGYYWK CCACCACAGCTCAAGGAGGC CSSVGMRSTCCTSBKCCWCCACARYTSARGGASRB Direction: Forward Position #: 16 Overlap #: 20 Alignment: CSSVGMRSTCCTSBKDYTCHACHMTKGASGGYYWK ---------------CCACCACAGCTCAAGGAGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 43 Combined Motif Reverse Complement Reverse Complement BMSTCCKTSAKMTGTGGWGGYVSAGGASMRCVSSG AGGAGRCMCTCTGCCTGGC BMSTCCKTSAKMTGTRGGRGHVCMKSWGCCYGGCG Direction: Forward Position #: 16 Overlap #: 19 Alignment: BMSTCCKTSAKMTGTGGWGGYVSAGGASMRCVSSG ---------------AGGAGRCMCTCTGCCTGGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 30 Combined Motif Original Motif Original Motif BMSTCCKTSAKMTGTRGGRGHVCMKSWGCCYGGCG AGGAGCGCCTCTKCCCGGC BMSTCCKTSAKMTGTAGGAGCGCCTCTKCCCGGCG Direction: Forward Position #: 16 Overlap #: 19 Alignment: BMSTCCKTSAKMTGTRGGRGHVCMKSWGCCYGGCG ---------------AGGAGCGCCTCTKCCCGGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 260 Combined Motif Reverse Complement Reverse Complement CGCCGGGYAGAGGCGCTCCTACARYTSARGGASRB TTMGTCCCAGAGGGGCACC CGCCGGGYAGAGGCGYTCSTMCMAGWGRGGSACCB Direction: Forward Position #: 16 Overlap #: 19 Alignment: CGCCGGGYAGAGGCGCTCCTACARYTSARGGASRB ---------------TTMGTCCCAGAGGGGCACC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 58 Combined Motif Original Motif Original Motif CGCCGGGYAGAGGCGYTCSTMCMAGWGRGGSACCB ATGGACAYTTRGGTTGHTTC CGCCGGGYAGAGGCGHTSGWCMCDTAGGKKGAYYC Direction: Forward Position #: 16 Overlap #: 20 Alignment: CGCCGGGYAGAGGCGYTCSTMCMAGWGRGGSACCB ---------------ATGGACAYTTRGGTTGHTTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 132 Combined Motif Original Motif Reverse Complement CGCCGGGYAGAGGCGHTSGWCMCDTAGGKKGAYYC GCCGCCATCTTG CGCCGGGYAGAGGCGDYCGHCATHTTGGKKGAYYC Direction: Forward Position #: 16 Overlap #: 12 Alignment: CGCCGGGYAGAGGCGHTSGWCMCDTAGGKKGAYYC ---------------GCCGCCATCTTG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 321 Combined Motif Reverse Complement Reverse Complement GMMTCRRCCAADATGDCGMHCGCCTCTKCCCGGCG GCTCCACCCAGTTCGAGCTT GMMTCRRCCAADATGGCKCCMCCCWSTTCSMGSYK Direction: Forward Position #: 16 Overlap #: 20 Alignment: GMMTCRRCCAADATGDCGMHCGCCTCTKCCCGGCG ---------------GCTCCACCCAGTTCGAGCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 183 Combined Motif Original Motif Original Motif GMMTCRRCCAADATGGCKCCMCCCWSTTCSMGSYK GCCRGCCCTGCYGGCC GMMTCRRCCAADATGGCYVSCCCYGCTKSCCGSYK Direction: Forward Position #: 16 Overlap #: 16 Alignment: GMMTCRRCCAADATGGCKCCMCCCWSTTCSMGSYK ---------------GCCRGCCCTGCYGGCC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 61 Combined Motif Original Motif Original Motif GMMTCRRCCAADATGGCYVSCCCYGCTKSCCGSYK GGATCCACTGGGTGAAGCCA GMMTCRRCCAADATGGSMHCCMCTGSKTGMMGCCW Direction: Forward Position #: 16 Overlap #: 20 Alignment: GMMTCRRCCAADATGGCYVSCCCYGCTKSCCGSYK ---------------GGATCCACTGGGTGAAGCCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 127 Combined Motif Original Motif Original Motif GMMTCRRCCAADATGGSMHCCMCTGSKTGMMGCCW CCCCAACCCC GMMTCRRCCAADATGSCCYMMMCYVSKTGMMGCCW Direction: Forward Position #: 16 Overlap #: 10 Alignment: GMMTCRRCCAADATGGSMHCCMCTGSKTGMMGCCW ---------------CCCCAACCCC---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 335 Combined Motif Original Motif Original Motif GMMTCRRCCAADATGSCCYMMMCYVSKTGMMGCCW GTTAATGCTGA GMMTCRRCCAADATGGYYMAWSCTGRKTGMMGCCW Direction: Forward Position #: 16 Overlap #: 11 Alignment: GMMTCRRCCAADATGSCCYMMMCYVSKTGMMGCCW ---------------GTTAATGCTGA--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 163 Combined Motif Reverse Complement Reverse Complement WGGCYYCAYKCAGSWTYMMCCATHTTGGKKGAYYC GGAGCCCACGGAGG WGGCYYCAYKCAGSWKGAGCCMWCKKRGKKGAYYC Direction: Forward Position #: 16 Overlap #: 14 Alignment: WGGCYYCAYKCAGSWTYMMCCATHTTGGKKGAYYC ---------------GGAGCCCACGGAGG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 164 Combined Motif Reverse Complement Reverse Complement GMMTCRYCKYYGWRGGCTCYWSCTGRKTGMMGCCW GCGMGCGGGAACCGGGGCT GMMTCRYCKYYGWRGGCKMSCGSKRACYGRRGCYW Direction: Forward Position #: 16 Overlap #: 19 Alignment: GMMTCRYCKYYGWRGGCTCYWSCTGRKTGMMGCCW ---------------GCGMGCGGGAACCGGGGCT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 171 Combined Motif Original Motif Reverse Complement GMMTCRYCKYYGWRGGCKMSCGSKRACYGRRGCYW ACTTTGGACTGTGGACTTTT GMMTCRYCDCTKTGGRCTGKSGVCWWYTGRRGCYW Direction: Forward Position #: 9 Overlap #: 20 Alignment: GMMTCRYCKYYGWRGGCKMSCGSKRACYGRRGCYW --------ACTTTGGACTGTGGACTTTT------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 169 Combined Motif Original Motif Reverse Complement GMMTCRYCDCTKTGGRCTGKSGVCWWYTGRRGCYW TTTTATAGGATTTGGG GMMTCRYCDCTKTGGDYTTWTRGGWTTTGGGGCYW Direction: Forward Position #: 16 Overlap #: 16 Alignment: GMMTCRYCDCTKTGGRCTGKSGVCWWYTGRRGCYW ---------------TTTTATAGGATTTGGG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 347 Combined Motif Reverse Complement Reverse Complement WMGCCCCAAAWCCKAWAAMDCCARAGDGKKGAYYC GTGTGCGAATAGGTGT WMGCCCCAAAWCCKAGTRTDCSAAWRGGTGKAYYC Direction: Forward Position #: 16 Overlap #: 16 Alignment: WMGCCCCAAAWCCKAWAAMDCCARAGDGKKGAYYC ---------------GTGTGCGAATAGGTGT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 82 Combined Motif Original Motif Original Motif WMGCCCCAAAWCCKAGTRTDCSAAWRGGTGKAYYC GCTTAGCACCYGGGCCAGC WMGCCCCAAAWCCKAGYTTASCAMCHGGKSCAGYC Direction: Forward Position #: 16 Overlap #: 19 Alignment: WMGCCCCAAAWCCKAGTRTDCSAAWRGGTGKAYYC ---------------GCTTAGCACCYGGGCCAGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 119 Combined Motif Reverse Complement Original Motif GKCTGSYCCDGRTGSTAAKCTRGGWTTTGGGGCYW AAGTCCAAGATCAAGGTGYY GKCTGSYCCDGRTGSWARTCYAAGATYWRGGKSYH Direction: Forward Position #: 16 Overlap #: 20 Alignment: GKCTGSYCCDGRTGSTAAKCTRGGWTTTGGGGCYW ---------------AAGTCCAAGATCAAGGTGYY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 104 Combined Motif Reverse Complement Original Motif HMSYCCMWKATCTTKGAMTWSCAMCHGGKSCAGYC CAACATGGATGRARCTGGAG HMSYCCMWKATCTTKSAAYWBSRATGGRGCTRGMS Direction: Forward Position #: 16 Overlap #: 20 Alignment: HMSYCCMWKATCTTKGAMTWSCAMCHGGKSCAGYC ---------------CAACATGGATGRARCTGGAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 166 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 166 Motif 305 Original Motif Original Motif AAGGGACATTKGAG AATGACCAATTGAGAGC AGCAAKGRMCAWTTGAG Direction: Backward Position #: 4 Overlap #: 14 Alignment: AAGGGACATTKGAG--- AATGACCAATTGAGAGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 329 Combined Motif Reverse Complement Original Motif CTCAAWTGRMCRTTGCT GGGAGGGATATATTAGC CTCAAWKGGASGKWKMTATTAGC Direction: Forward Position #: 7 Overlap #: 11 Alignment: CTCAAWTGRMCRTTGCT------ ------GGGAGGGATATATTAGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 227 Combined Motif Reverse Complement Reverse Complement GCTAATARYWYCSTCCYWTTGAG ATTCAASATGAGATTTGGG GCTAATARYWTYCWMCMTKWGAKTTGGG Direction: Forward Position #: 10 Overlap #: 14 Alignment: GCTAATARYWYCSTCCYWTTGAG----- ---------ATTCAASATGAGATTTGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 176 Combined Motif Original Motif Reverse Complement GCTAATARYWTYCWMCMTKWGAKTTGGG AACAACASACACTGGGGCCT GCTAATARYWTYMAMMAYDVRMDYTGGGGCCT Direction: Forward Position #: 13 Overlap #: 16 Alignment: GCTAATARYWTYCWMCMTKWGAKTTGGG---- ------------AACAACASACACTGGGGCCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 99 Combined Motif Original Motif Reverse Complement GCTAATARYWTYMAMMAYDVRMDYTGGGGCCT AATGAKATCATGTCYTTTGC GCTAATARYWTYMAMAWBABAHHHTGKSBYYTGC Direction: Forward Position #: 15 Overlap #: 18 Alignment: GCTAATARYWTYMAMMAYDVRMDYTGGGGCCT-- --------------AATGAKATCATGTCYTTTGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 194 Combined Motif Reverse Complement Reverse Complement GCAMMBSRCAHDHTBTBWTYTYMAWKMTATTAGC CAGCTACTCKTATACCCTTG GCAMMBSRCAHDHTBYAGYTWCTMDTATAYYMKYG Direction: Forward Position #: 16 Overlap #: 19 Alignment: GCAMMBSRCAHDHTBTBWTYTYMAWKMTATTAGC- ---------------CAGCTACTCKTATACCCTTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 118 Combined Motif Reverse Complement Reverse Complement CKRYMMTATADRAGWAKCTKBAHHHTGKSBYYTGC GGAGGATCACKTGAG CKRYMMTATADRAGWRGHKGAWCMCTKGAGYYTGC Direction: Forward Position #: 16 Overlap #: 15 Alignment: CKRYMMTATADRAGWAKCTKBAHHHTGKSBYYTGC ---------------GGAGGATCACKTGAG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 261 Combined Motif Reverse Complement Original Motif GCAMMCTCRAGYGWTCYHCMWCTMDTATAYYMKYG ATCTCASAAATCACCACTA GCAMMCTCRAGYGWTMTCYCACAAWTMWMCHCTHG Direction: Forward Position #: 16 Overlap #: 19 Alignment: GCAMMCTCRAGYGWTCYHCMWCTMDTATAYYMKYG ---------------ATCTCASAAATCACCACTA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 35 Combined Motif Reverse Complement Original Motif CHAGHGYWRAWTTGTGMGAYAWCMCTKGAGYYTGC CAGAAATCACCCGTCTT CHAGHGYWRAWTTGTSAGAAATCACYYGTSTTTGC Direction: Forward Position #: 16 Overlap #: 17 Alignment: CHAGHGYWRAWTTGTGMGAYAWCMCTKGAGYYTGC ---------------CAGAAATCACCCGTCTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 16 Combined Motif Original Motif Reverse Complement CHAGHGYWRAWTTGTSAGAAATCACYYGTSTTTGC GGGTCAGGGAGTTCCCTTTC CHAGHGYWRAWTTGTGRGWCAKSRMKTKCCYTTKC Direction: Forward Position #: 16 Overlap #: 20 Alignment: CHAGHGYWRAWTTGTSAGAAATCACYYGTSTTTGC ---------------GGGTCAGGGAGTTCCCTTTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 231 Combined Motif Reverse Complement Original Motif GRAAKGGRAYYMSYTGWCMCACAAWTMWMCHCTHG ACAAGGCAAGTCCCTTCY GRAAKGGRAYYMSYTRHMASRCAAGTCHCYTCTHG Direction: Forward Position #: 16 Overlap #: 18 Alignment: GRAAKGGRAYYMSYTGWCMCACAAWTMWMCHCTHG ---------------ACAAGGCAAGTCCCTTCY-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 350 Combined Motif Reverse Complement Original Motif CHAGAMGDGACTTGMSTYDKAKSRMKTKCCYTTKC TCTGGAGTGGACCTCCAGCA CHAGAMGDGACTTGMYYTGGAGTGRDYYYCCWKYM Direction: Forward Position #: 16 Overlap #: 20 Alignment: CHAGAMGDGACTTGMSTYDKAKSRMKTKCCYTTKC ---------------TCTGGAGTGGACCTCCAGCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 115 Combined Motif Original Motif Original Motif CHAGAMGDGACTTGMYYTGGAGTGRDYYYCCWKYM ATGATCCAGCAATYCCACTH CHAGAMGDGACTTGMHTKRKMSWGSAHTYCCABTM Direction: Forward Position #: 16 Overlap #: 20 Alignment: CHAGAMGDGACTTGMYYTGGAGTGRDYYYCCWKYM ---------------ATGATCCAGCAATYCCACTH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 357 Combined Motif Reverse Complement Reverse Complement YABTGGMAHTSCWSYRKYAHRCAAGTCHCYTCTHG TAATTTTATGTGTCAACTTG YABTGGMAHTSCWSYDWHWTKYAWGTSTCWWCTTG Direction: Forward Position #: 16 Overlap #: 20 Alignment: YABTGGMAHTSCWSYRKYAHRCAAGTCHCYTCTHG ---------------TAATTTTATGTGTCAACTTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 170 Combined Motif Original Motif Original Motif YABTGGMAHTSCWSYDWHWTKYAWGTSTCWWCTTG AATCAACCCTGGYRATCAAT YABTGGMAHTSCWSYAATCAACMCKKGYVATCWWK Direction: Forward Position #: 16 Overlap #: 20 Alignment: YABTGGMAHTSCWSYDWHWTKYAWGTSTCWWCTTG ---------------AATCAACCCTGGYRATCAAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 102 Combined Motif Reverse Complement Original Motif RWWGATVMCYRGRGTTGATTMSWGSAHTYCCABTM CTCATTTAATCCTCACAAC RWWGATVMCYRGRGTYKMWTHBARYMHTYMCAVYM Direction: Forward Position #: 16 Overlap #: 19 Alignment: RWWGATVMCYRGRGTTGATTMSWGSAHTYCCABTM ---------------CTCATTTAATCCTCACAAC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 129 Combined Motif Original Motif Reverse Complement RWWGATVMCYRGRGTYKMWTHBARYMHTYMCAVYM TGAGKCAATTAAACCTCTT RWWGATVMCYRGRGTTKARTCDADTAAWCCYMTTM Direction: Forward Position #: 16 Overlap #: 19 Alignment: RWWGATVMCYRGRGTYKMWTHBARYMHTYMCAVYM ---------------TGAGKCAATTAAACCTCTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 230 Combined Motif Reverse Complement Original Motif YAARMGGWTTADTDGAMTYAACMCKKGYVATCWWK AGAAAGGCATGTGAAAA YAARMGGWTTADTDGAVWMARSCATGKBAAWMWWK Direction: Forward Position #: 16 Overlap #: 17 Alignment: YAARMGGWTTADTDGAMTYAACMCKKGYVATCWWK ---------------AGAAAGGCATGTGAAAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 171 Combined Motif Original Motif Reverse Complement YAARMGGWTTADTDGAVWMARSCATGKBAAWMWWK ACTTTGGACTGTGGACTTTT YAARMGGWTTADTDGACTTWGGMMTGTGRAMWTTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: YAARMGGWTTADTDGAVWMARSCATGKBAAWMWWK ---------------ACTTTGGACTGTGGACTTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 235 Combined Motif Reverse Complement Original Motif AAAWRTMCACARYCCWAAGTCDADTAAWCCYMTTM TCCAAATGGGAGAAATTGGC AAAWRTMCACARYCCTMMRWMTRGKARAMMTHKKC Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAAWRTMCACARYCCWAAGTCDADTAAWCCYMTTM ---------------TCCAAATGGGAGAAATTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 254 Combined Motif Reverse Complement Reverse Complement GYYHAYYTMTYCMAYWKRRAGGMMTGTGRAMWTTT ATAGGAATGCTTGTGATTTT GYYHAYYTMTYCMAYATAGDRRWSYKTGKRATTTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: GYYHAYYTMTYCMAYWKRRAGGMMTGTGRAMWTTT ---------------ATAGGAATGCTTGTGATTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 112 Combined Motif Reverse Complement Reverse Complement AAAATMRCARKSWKKDCTATMTRGKARAMMTHKKC CTTGCCCAAGGTCACACAGC AAAATMRCARKSWKKVYTRYMHARGRDMAMWCRGC Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAAATMRCARKSWKKDCTATMTRGKARAMMTHKKC ---------------CTTGCCCAAGGTCACACAGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 242 Combined Motif Reverse Complement Reverse Complement GCKGWRTRHKCKTDRKMAMVRRWSYKTGKRATTTT CMCAGTTCACAATAGGGTT GCKGWRTRHKCKTDRVMMAGWTCACWWKAGRKTTT Direction: Forward Position #: 16 Overlap #: 19 Alignment: GCKGWRTRHKCKTDRKMAMVRRWSYKTGKRATTTT ---------------CMCAGTTCACAATAGGGTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 262 Combined Motif Reverse Complement Original Motif AAAYMCTRWWGTGAWCTRRVMHARGRDMAMWCRGC CTCAGTGTTAATCTCCTGTC AAAYMCTRWWGTGAWCTCAGYGWTRATCWCCTRKC Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAAYMCTRWWGTGAWCTRRVMHARGRDMAMWCRGC ---------------CTCAGTGTTAATCTCCTGTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 26 Combined Motif Original Motif Original Motif AAAYMCTRWWGTGAWCTCAGYGWTRATCWCCTRKC CTCCTGCCTCAGCCTCCCRA AAAYMCTRWWGTGAWCTCMBDSYTVAKCYYCYBDM Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAAYMCTRWWGTGAWCTCAGYGWTRATCWCCTRKC ---------------CTCCTGCCTCAGCCTCCCRA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 119 Combined Motif Reverse Complement Reverse Complement YHBKGMKGYTVAKSHVRGAGWTCACWWKAGRKTTT KKCACCTTGATCTTGGACTT YHBKGMKGYTVAKSHDDSASHTTRMWMTWGGRYTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: YHBKGMKGYTVAKSHVRGAGWTCACWWKAGRKTTT ---------------KKCACCTTGATCTTGGACTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 217 Combined Motif Reverse Complement Original Motif AAMKCCWARWRMAADSTSHHDSYTVAKCYYCYBDM CCCTACTGTTCTCY AAMKCCWARWRMAADCYCTACBBTTMTCYYCYBDM Direction: Forward Position #: 16 Overlap #: 14 Alignment: AAMKCCWARWRMAADSTSHHDSYTVAKCYYCYBDM ---------------CCCTACTGTTCTCY------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 104 Combined Motif Original Motif Reverse Complement AAMKCCWARWRMAADCYCTACBBTTMTCYYCYBDM CTCCAGKTMCATCCATGTTG AAMKCCWARWRMAADCTCYABBKHCATCCAYBTKV Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAMKCCWARWRMAADCYCTACBBTTMTCYYCYBDM ---------------CTCCAGKTMCATCCATGTTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 14 Combined Motif Reverse Complement Reverse Complement VRABKTGGATGHRVBTKGAGHTTRMWMTWGGRYTT AGTGACCCGATTTTCCAGGT VRABKTGGATGHRVBWGKRRCYYGATTTTSSABKT Direction: Forward Position #: 16 Overlap #: 20 Alignment: VRABKTGGATGHRVBTKGAGHTTRMWMTWGGRYTT ---------------AGTGACCCGATTTTCCAGGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 189 Combined Motif Original Motif Original Motif VRABKTGGATGHRVBWGKRRCYYGATTTTSSABKT ATCCAGTCTATCATTG VRABKTGGATGHRVBAKYCASTCKATYWTTGABKT Direction: Forward Position #: 16 Overlap #: 16 Alignment: VRABKTGGATGHRVBWGKRRCYYGATTTTSSABKT ---------------ATCCAGTCTATCATTG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 234 Combined Motif Original Motif Original Motif VRABKTGGATGHRVBAKYCASTCKATYWTTGABKT AAGGAACAAACTCCRGACAC VRABKTGGATGHRVBAWGGAAYMDAYTHYDGACDY Direction: Forward Position #: 16 Overlap #: 20 Alignment: VRABKTGGATGHRVBAKYCASTCKATYWTTGABKT ---------------AAGGAACAAACTCCRGACAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 25 Combined Motif Original Motif Original Motif VRABKTGGATGHRVBAWGGAAYMDAYTHYDGACDY CATTTCCAWCTGAGGTAC VRABKTGGATGHRVBMAKKWCCAWMTKAKGKACDY Direction: Forward Position #: 16 Overlap #: 18 Alignment: VRABKTGGATGHRVBAWGGAAYMDAYTHYDGACDY ---------------CATTTCCAWCTGAGGTAC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 306 Combined Motif Original Motif Reverse Complement VRABKTGGATGHRVBMAKKWCCAWMTKAKGKACDY CAAGCGCCAGCTCATGTC VRABKTGGATGHRVBCAWGHSCMASYTMRKGWCDY Direction: Forward Position #: 16 Overlap #: 18 Alignment: VRABKTGGATGHRVBMAKKWCCAWMTKAKGKACDY ---------------CAAGCGCCAGCTCATGTC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 67 Combined Motif Original Motif Reverse Complement VRABKTGGATGHRVBCAWGHSCMASYTMRKGWCDY CACCAGACTCAGGAGCCCAG VRABKTGGATGHRVBCAMSAGMCWCMKSAGSHCAK Direction: Forward Position #: 16 Overlap #: 20 Alignment: VRABKTGGATGHRVBCAWGHSCMASYTMRKGWCDY ---------------CACCAGACTCAGGAGCCCAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 19 Combined Motif Original Motif Original Motif VRABKTGGATGHRVBCAMSAGMCWCMKSAGSHCAK CACCAGGAGATTATATCCCR VRABKTGGATGHRVBCACCAGRMKMWTAWRTCCMG Direction: Forward Position #: 16 Overlap #: 20 Alignment: VRABKTGGATGHRVBCAMSAGMCWCMKSAGSHCAK ---------------CACCAGGAGATTATATCCCR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 190 Combined Motif Original Motif Original Motif VRABKTGGATGHRVBCACCAGRMKMWTAWRTCCMG CAAAGGCATAAGAATGAT VRABKTGGATGHRVBCAMMRGCATAAKAATKMYMG Direction: Forward Position #: 16 Overlap #: 18 Alignment: VRABKTGGATGHRVBCACCAGRMKMWTAWRTCCMG ---------------CAAAGGCATAAGAATGAT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 148 Combined Motif Original Motif Original Motif VRABKTGGATGHRVBCAMMRGCATAAKAATKMYMG AAAGAGAGTCAGCGAAG VRABKTGGATGHRVBMAARAGMRTMAGMRARRYMG Direction: Forward Position #: 16 Overlap #: 17 Alignment: VRABKTGGATGHRVBCAMMRGCATAAKAATKMYMG ---------------AAAGAGAGTCAGCGAAG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 76 Combined Motif Reverse Complement Reverse Complement CRKMKTKRCTRAMYCTMTTYBBKHCATCCAYBTKV CMTAGYACAGTGCCTGGCAC CRKMKTKRCTRAMYCYMTWBBDBABWKCCTBGYAC Direction: Forward Position #: 16 Overlap #: 20 Alignment: CRKMKTKRCTRAMYCTMTTYBBKHCATCCAYBTKV ---------------CMTAGYACAGTGCCTGGCAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 213 Combined Motif Reverse Complement Reverse Complement GTKCBAGGYWBTBDBBWARKGMRTMAGMRARRYMG TGTATTAGTCMMTT GTKCBAGGYWBTBDBTDWRTKAGTCAVTTARRYMG Direction: Forward Position #: 16 Overlap #: 14 Alignment: GTKCBAGGYWBTBDBBWARKGMRTMAGMRARRYMG ---------------TGTATTAGTCMMTT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 328 Combined Motif Original Motif Reverse Complement GTKCBAGGYWBTBDBTDWRTKAGTCAVTTARRYMG KACATTGATTTTGTATC GTKCBAGGYWBTBDBTAHATTRRTYWTBTAWCYMG Direction: Forward Position #: 16 Overlap #: 17 Alignment: GTKCBAGGYWBTBDBTDWRTKAGTCAVTTARRYMG ---------------KACATTGATTTTGTATC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 160 Combined Motif Original Motif Reverse Complement GTKCBAGGYWBTBDBTAHATTRRTYWTBTAWCYMG TACCTGAGACTGGGTAATTT GTKCBAGGYWBTBDBTACMTKAGWCTKGKWAMTTK Direction: Forward Position #: 16 Overlap #: 20 Alignment: GTKCBAGGYWBTBDBTAHATTRRTYWTBTAWCYMG ---------------TACCTGAGACTGGGTAATTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 225 Combined Motif Reverse Complement Reverse Complement RAAYTWYCYAGWCTYARGTABDBABWKCCTBGYAC AAGTTCTKGGKTACATGTGC RAAYTWYCYAGWCTYAAGTWCDBRGDTMCATGTGC Direction: Forward Position #: 16 Overlap #: 20 Alignment: RAAYTWYCYAGWCTYARGTABDBABWKCCTBGYAC ---------------AAGTTCTKGGKTACATGTGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 94 Combined Motif Reverse Complement Original Motif GCACATGYADCMBDGWACTTKAGWCTKGKWAMTTK TAAGTGGGAGCTAARC GCACATGYADCMBDGTAMKTGRGASYTRADHMTTK Direction: Forward Position #: 16 Overlap #: 16 Alignment: GCACATGYADCMBDGWACTTKAGWCTKGKWAMTTK ---------------TAAGTGGGAGCTAARC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 145 Combined Motif Reverse Complement Reverse Complement RAAYDDTKAKSTCMCAYYTACDBRGDTMCATGTGC TYTGTCMTTTTGTGACTGGC RAAYDDTKAKSTCMCWYTKWCHTTKTKWSAYKKGC Direction: Forward Position #: 16 Overlap #: 20 Alignment: RAAYDDTKAKSTCMCAYYTACDBRGDTMCATGTGC ---------------TYTGTCMTTTTGTGACTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 195 Combined Motif Reverse Complement Original Motif GCYRKTSWYAYAADGWRAMWGRGASYTRADHMTTK TAAAAGACTACAWATTGGGT GCYRKTSWYAYAADGTAAAAGASWACWDATWRKDT Direction: Forward Position #: 16 Overlap #: 20 Alignment: GCYRKTSWYAYAADGWRAMWGRGASYTRADHMTTK ---------------TAAAAGACTACAWATTGGGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 18 Combined Motif Original Motif Original Motif GCYRKTSWYAYAADGTAAAAGASWACWDATWRKDT GAAAAGCGCAGTATTMGGG GCYRKTSWYAYAADGKAAAAGVGYAVTAWTHGGGT Direction: Forward Position #: 16 Overlap #: 19 Alignment: GCYRKTSWYAYAADGTAAAAGASWACWDATWRKDT ---------------GAAAAGCGCAGTATTMGGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 63 Combined Motif Original Motif Reverse Complement GCYRKTSWYAYAADGKAAAAGVGYAVTAWTHGGGT AAAMAMMKMATGTTCTCACT GCYRKTSWYAYAADGAAAMAVMGMATKWTYTSRST Direction: Forward Position #: 16 Overlap #: 20 Alignment: GCYRKTSWYAYAADGKAAAAGVGYAVTAWTHGGGT ---------------AAAMAMMKMATGTTCTCACT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 178 Original Motif Original Motif GCYRKTSWYAYAADGAAAMAVMGMATKWTYTSRST ACTGTCTTCCACCTCCACAT ACTGTCTKCCASYTCCACAWDGAAAMAVMGMATKWTYTSRST Direction: Forward Position #: 8 Overlap #: 13 Alignment: -------GCYRKTSWYAYAADGAAAMAVMGMATKWTYTSRST ACTGTCTTCCACCTCCACAT---------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 332 Combined Motif Original Motif Reverse Complement ACTGTCTKCCASYTCCACAWDGAAAMAVMGMATKWTYTSRST GTTTAACCATTGAGGGCCAG ACTGTCTKCCASYTCCACAKTKTAACMAHTSAKGKYCWGRST Direction: Forward Position #: 20 Overlap #: 20 Alignment: ACTGTCTKCCASYTCCACAWDGAAAMAVMGMATKWTYTSRST -------------------GTTTAACCATTGAGGGCCAG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 308 Combined Motif Original Motif Original Motif ACTGTCTKCCASYTCCACAKTKTAACMAHTSAKGKYCWGRST AAATTAGGCCAATTAATAAC ACTGTCTKCMAVTTASRCMAWTTAAYAAYTSAKGKYCWGRST Direction: Forward Position #: 10 Overlap #: 20 Alignment: ACTGTCTKCCASYTCCACAKTKTAACMAHTSAKGKYCWGRST ---------AAATTAGGCCAATTAATAAC------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 219 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 219 Motif 68 Original Motif Reverse Complement CTGCAGCCTC GACCTGCAGCCCGCCATG GACCTSYRSMSCSYCATG Direction: Forward Position #: 6 Overlap #: 10 Alignment: -----CTGCAGCCTC--- GACCTGCAGCCCGCCATG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 220 Combined Motif Original Motif Original Motif GACCTSYRSMSCSYCATG TGCACTGCACCCAC GACCTSYDGCRCTGCAYSCAC Direction: Forward Position #: 8 Overlap #: 11 Alignment: GACCTSYRSMSCSYCATG--- -------TGCACTGCACCCAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 320 Combined Motif Original Motif Original Motif GACCTSYDGCRCTGCAYSCAC CATCTGGAGCCCCA GACCTSYDSMDCTGSAKCCMCA Direction: Forward Position #: 9 Overlap #: 13 Alignment: GACCTSYDGCRCTGCAYSCAC- --------CATCTGGAGCCCCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 191 Combined Motif Reverse Complement Original Motif TGRGGYTSCAGDYSDKSAGGTC AAAGTGCCGAGAKTGCAGC TGRGGYTSCARAKKGBCRRGWYTGCAGC Direction: Forward Position #: 10 Overlap #: 13 Alignment: TGRGGYTSCAGDYSDKSAGGTC------ ---------AAAGTGCCGAGAKTGCAGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 313 Combined Motif Original Motif Original Motif TGRGGYTSCARAKKGBCRRGWYTGCAGC CTCCTGCCTCAGCY TGRGGYTSCARACTSCYGVSTCWGCWGC Direction: Forward Position #: 13 Overlap #: 14 Alignment: TGRGGYTSCARAKKGBCRRGWYTGCAGC ------------CTCCTGCCTCAGCY-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 245 Combined Motif Original Motif Reverse Complement TGRGGYTSCARACTSCYGVSTCWGCWGC TTGAGGAGGCAGTCTG TGRGGYTSCARAYTGMGGAGKCAGYCKS Direction: Forward Position #: 13 Overlap #: 16 Alignment: TGRGGYTSCARACTSCYGVSTCWGCWGC ------------TTGAGGAGGCAGTCTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 6 Combined Motif Reverse Complement Original Motif SRGKCTGYCTCCYCAMTKTGSAKCCMCA GCTCACTGCAASCTC SRGKCTGYCTCCBCWMWBTGCADSCHCA Direction: Forward Position #: 13 Overlap #: 15 Alignment: SRGKCTGYCTCCYCAMTKTGSAKCCMCA ------------GCTCACTGCAASCTC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 17 Combined Motif Original Motif Original Motif SRGKCTGYCTCCBCWMWBTGCADSCHCA AGACAGTGGGYGCAGGHCA SRGKCTGYCTCCRSACAGTGSRHGCASDHCA Direction: Forward Position #: 13 Overlap #: 16 Alignment: SRGKCTGYCTCCBCWMWBTGCADSCHCA--- ------------AGACAGTGGGYGCAGGHCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 101 Combined Motif Original Motif Original Motif SRGKCTGYCTCCRSACAGTGSRHGCASDHCA CGCCGCCGCCGC SRGKCTGYCTCCRCRCMGYSGVCGCASDHCA Direction: Forward Position #: 14 Overlap #: 12 Alignment: SRGKCTGYCTCCRSACAGTGSRHGCASDHCA -------------CGCCGCCGCCGC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 121 Combined Motif Reverse Complement Reverse Complement TGHHSTGCGVCSKCRGMGKGGAGKCAGYCKS TGGAGGTTSTAG TGHHSTGCGVCSKYGGAGGTKVKASAGYCKS Direction: Forward Position #: 14 Overlap #: 12 Alignment: TGHHSTGCGVCSKCRGMGKGGAGKCAGYCKS -------------TGGAGGTTSTAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 26 Combined Motif Original Motif Reverse Complement TGHHSTGCGVCSKYGGAGGTKVKASAGYCKS TMGGGAGGCTGAGGCAGGAG TGHHSTGCGVCSKTVGRGRKKCTRVRGCMGGAG Direction: Forward Position #: 14 Overlap #: 18 Alignment: TGHHSTGCGVCSKYGGAGGTKVKASAGYCKS-- -------------TMGGGAGGCTGAGGCAGGAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 266 Combined Motif Reverse Complement Original Motif CTCCYGCMBMAGYYKCMCVAYSGVCGCASDHCA GCAGCAGCAGCA CTCCYGCMBMAGYYGCASCABCRGCRCASDHCA Direction: Forward Position #: 15 Overlap #: 12 Alignment: CTCCYGCMBMAGYYKCMCVAYSGVCGCASDHCA --------------GCAGCAGCAGCA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 5 Combined Motif Original Motif Reverse Complement CTCCYGCMBMAGYYGCASCABCRGCRCASDHCA GGAGGCKGAGG CTCCYGCMBMAGYYGSAGSMKSAGSRCASDHCA Direction: Forward Position #: 15 Overlap #: 11 Alignment: CTCCYGCMBMAGYYGCASCABCRGCRCASDHCA --------------GGAGGCKGAGG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 309 Combined Motif Reverse Complement Original Motif TGHHSTGKSCTSRRSCTSCKKCTRVRGCMGGAG CATTCTGGGGTCTGGAGGAY TGHHSTGKSCTSRRCMTYCTGSKGDVKSVRGRRY Direction: Forward Position #: 15 Overlap #: 19 Alignment: TGHHSTGKSCTSRRSCTSCKKCTRVRGCMGGAG- --------------CATTCTGGGGTCTGGAGGAY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 193 Combined Motif Original Motif Original Motif TGHHSTGKSCTSRRCMTYCTGSKGDVKSVRGRRY ATACAATGGGGGTACAGRC TGHHSTGKSCTSRRCATHCWRKGGKGKKAVRGRY Direction: Forward Position #: 16 Overlap #: 19 Alignment: TGHHSTGKSCTSRRCMTYCTGSKGDVKSVRGRRY ---------------ATACAATGGGGGTACAGRC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 333 Combined Motif Reverse Complement Reverse Complement KKCKVTRYCYCCRKWGHATGMKSAGSRCASDHCA AAAGCTGGAGCTATTATCTA KKCKVTRYCYCCRKWRAAKSYGGAGCDMWKATCWA Direction: Forward Position #: 16 Overlap #: 19 Alignment: KKCKVTRYCYCCRKWGHATGMKSAGSRCASDHCA- ---------------AAAGCTGGAGCTATTATCTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 4 Combined Motif Reverse Complement Original Motif TWGATRWYDGCTCCMSYTTKWRKGGKGKKAVRGRY GCTGGGATTACAGG TWGATRWYDGCTCCMGCTKGGATKRBRGGAVRGRY Direction: Forward Position #: 16 Overlap #: 14 Alignment: TWGATRWYDGCTCCMSYTTKWRKGGKGKKAVRGRY ---------------GCTGGGATTACAGG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 229 Combined Motif Reverse Complement Reverse Complement KKCKVTCCKBMRATCCYAGCYGGAGCDMWKATCWA GCGGCAGCAAGGC KKCKVTCCKBMRATCSCRGCAGSARSGCWKATCWA Direction: Forward Position #: 16 Overlap #: 13 Alignment: KKCKVTCCKBMRATCCYAGCYGGAGCDMWKATCWA ---------------GCGGCAGCAAGGC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 312 Combined Motif Reverse Complement Original Motif TWGATRWGCSKTSCTGCKGSGATKRBRGGAVRGRY AGGACTGAGGGTGCCYRGGG TWGATRWGCSKTSCTRSGRCTRWGGGWGCMCRGGB Direction: Forward Position #: 16 Overlap #: 20 Alignment: TWGATRWGCSKTSCTGCKGSGATKRBRGGAVRGRY ---------------AGGACTGAGGGTGCCYRGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 188 Combined Motif Reverse Complement Original Motif BCCMGRGCWCCCWMAGKCSKAGSARSGCWKATCWA CTCCAGACACATC BCCMGRGCWCCCWMASTCCDRRCAMRTCWKATCWA Direction: Forward Position #: 16 Overlap #: 13 Alignment: BCCMGRGCWCCCWMAGKCSKAGSARSGCWKATCWA ---------------CTCCAGACACATC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 67 Combined Motif Original Motif Reverse Complement BCCMGRGCWCCCWMASTCCDRRCAMRTCWKATCWA CACCAGACTCAGGAGCCCAG BCCMGRGCWCCCWMACWCCAGACWCAGSAGMYCAR Direction: Forward Position #: 16 Overlap #: 20 Alignment: BCCMGRGCWCCCWMASTCCDRRCAMRTCWKATCWA ---------------CACCAGACTCAGGAGCCCAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 96 Combined Motif Original Motif Original Motif BCCMGRGCWCCCWMACWCCAGACWCAGSAGMYCAR AAGCTGAGGGAGCCGGCTCC BCCMGRGCWCCCWMAMASCWGASGSAGCHGGCYMV Direction: Forward Position #: 16 Overlap #: 20 Alignment: BCCMGRGCWCCCWMACWCCAGACWCAGSAGMYCAR ---------------AAGCTGAGGGAGCCGGCTCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 286 Combined Motif Original Motif Original Motif BCCMGRGCWCCCWMAMASCWGASGSAGCHGGCYMV CAGGCGGCTGGGAG BCCMGRGCWCCCWMACAGSCGRCTGRGMVGGCYMV Direction: Forward Position #: 16 Overlap #: 14 Alignment: BCCMGRGCWCCCWMAMASCWGASGSAGCHGGCYMV ---------------CAGGCGGCTGGGAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 240 Combined Motif Original Motif Reverse Complement BCCMGRGCWCCCWMACAGSCGRCTGRGMVGGCYMV GGGACWGCACAT BCCMGRGCWCCCWMASRGRCRGCWSAKMVGGCYMV Direction: Forward Position #: 16 Overlap #: 12 Alignment: BCCMGRGCWCCCWMACAGSCGRCTGRGMVGGCYMV ---------------GGGACWGCACAT-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 104 Combined Motif Reverse Complement Original Motif VRMGCCVYRTSWGCMGKCMSTRWGGGWGCMCRGGB CAACATGGATGRARCTGGAG VRMGCCVYRTSWGCMSDMCVTGRRKGDRVCTGGRG Direction: Forward Position #: 16 Overlap #: 20 Alignment: VRMGCCVYRTSWGCMGKCMSTRWGGGWGCMCRGGB ---------------CAACATGGATGRARCTGGAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 178 Combined Motif Reverse Complement Reverse Complement CKCCAGVMDCRKMCABGYDSRGCWSAKMVGGCYMV ATGTGGAGGTGGAAGACAGT CKCCAGVMDCRKMCAHKKTGGRSRYRGAAGACHVT Direction: Forward Position #: 16 Overlap #: 20 Alignment: CKCCAGVMDCRKMCABGYDSRGCWSAKMVGGCYMV ---------------ATGTGGAGGTGGAAGACAGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 177 Combined Motif Reverse Complement Original Motif AVHGTCTTCMMMSKCCAYRHTGRRKGDRVCTGGRG CCCGAAGCTGCRYRCTCGGT AVHGTCTTCMMMSKCCMYRAWGCTGSRVVCTBGRK Direction: Forward Position #: 16 Overlap #: 20 Alignment: AVHGTCTTCMMMSKCCAYRHTGRRKGDRVCTGGRG ---------------CCCGAAGCTGCRYRCTCGGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 355 Combined Motif Original Motif Original Motif AVHGTCTTCMMMSKCCMYRAWGCTGSRVVCTBGRK TATGAGCCTGTAA AVHGTCTTCMMMSKCYATGARSCTGTAAVCTBGRK Direction: Forward Position #: 16 Overlap #: 13 Alignment: AVHGTCTTCMMMSKCCMYRAWGCTGSRVVCTBGRK ---------------TATGAGCCTGTAA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 299 Combined Motif Original Motif Reverse Complement AVHGTCTTCMMMSKCYATGARSCTGTAAVCTBGRK TTGGAGGTTCTAGCAGGG AVHGTCTTCMMMSKCTWKGAGGYTSTARCMKGGRK Direction: Forward Position #: 16 Overlap #: 18 Alignment: AVHGTCTTCMMMSKCYATGARSCTGTAAVCTBGRK ---------------TTGGAGGTTCTAGCAGGG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 301 Combined Motif Original Motif Reverse Complement AVHGTCTTCMMMSKCTWKGAGGYTSTARCMKGGRK GTCTGGMGTCTTGG AVHGTCTTCMMMSKCKTCKRGVKTCTWGGMKGGRK Direction: Forward Position #: 16 Overlap #: 14 Alignment: AVHGTCTTCMMMSKCTWKGAGGYTSTARCMKGGRK ---------------GTCTGGMGTCTTGG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 92 Combined Motif Original Motif Reverse Complement AVHGTCTTCMMMSKCKTCKRGVKTCTWGGMKGGRK GGTGGGGGGGTCAGCCCCC AVHGTCTTCMMMSKCGKYGGGGGKSTCRGCCSSSK Direction: Forward Position #: 16 Overlap #: 19 Alignment: AVHGTCTTCMMMSKCKTCKRGVKTCTWGGMKGGRK ---------------GGTGGGGGGGTCAGCCCCC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 52 Combined Motif Original Motif Reverse Complement AVHGTCTTCMMMSKCGKYGGGGGKSTCRGCCSSSK GGTGGAGCTGCCTGCCAGTC AVHGTCTTCMMMSKCGGTGGRGSTGYCWGCCMGYC Direction: Forward Position #: 16 Overlap #: 20 Alignment: AVHGTCTTCMMMSKCGKYGGGGGKSTCRGCCSSSK ---------------GGTGGAGCTGCCTGCCAGTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 84 Combined Motif Original Motif Reverse Complement AVHGTCTTCMMMSKCGGTGGRGSTGYCWGCCMGYC GGCACTGCTGGGGGACCCAG AVHGTCTTCMMMSKCGGYRSWGCTGBSGGMCMSAG Direction: Forward Position #: 16 Overlap #: 20 Alignment: AVHGTCTTCMMMSKCGGTGGRGSTGYCWGCCMGYC ---------------GGCACTGCTGGGGGACCCAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 100 Combined Motif Original Motif Reverse Complement AVHGTCTTCMMMSKCGGYRSWGCTGBSGGMCMSAG CGCGGCGCTTGCGGGCCAGC AVHGTCTTCMMMSKCSGCGGHGCTKGCGGRCCMGC Direction: Forward Position #: 16 Overlap #: 20 Alignment: AVHGTCTTCMMMSKCGGYRSWGCTGBSGGMCMSAG ---------------CGCGGCGCTTGCGGGCCAGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 325 Combined Motif Original Motif Original Motif AVHGTCTTCMMMSKCSGCGGHGCTKGCGGRCCMGC AGCAGCTGTAAATA AVHGTCTTCMMMSKCAGCRGCKSTARMKRRCCMGC Direction: Forward Position #: 16 Overlap #: 14 Alignment: AVHGTCTTCMMMSKCSGCGGHGCTKGCGGRCCMGC ---------------AGCAGCTGTAAATA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 125 Combined Motif Reverse Complement Original Motif GCYGGMKRYKTASRGCKGCTGRSRYRGAAGACHVT CGCCCGGCCAGCCGC GCYGGMKRYKTASRGCGSCYGGCSAGSMRSACHVT Direction: Forward Position #: 16 Overlap #: 15 Alignment: GCYGGMKRYKTASRGCKGCTGRSRYRGAAGACHVT ---------------CGCCCGGCCAGCCGC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 62 Combined Motif Reverse Complement Reverse Complement AVHGTSMRSCTSGCCKGSCGCKSTARMKRRCCMGC GTAGACKGGAGCTGTTCCT AVHGTSMRSCTSGCCGKRSRCKGKAGCTGDYCCTC Direction: Forward Position #: 16 Overlap #: 19 Alignment: AVHGTSMRSCTSGCCKGSCGCKSTARMKRRCCMGC ---------------GTAGACKGGAGCTGTTCCT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 39 Combined Motif Reverse Complement Reverse Complement GAGGMDCAGCTYCRGKSKYCGGCSAGSMRSACHVT CCTCCCAGCCGCCT GAGGMDCAGCTYCRGCCTCCSRSCMGCCKSACHVT Direction: Forward Position #: 16 Overlap #: 14 Alignment: GAGGMDCAGCTYCRGKSKYCGGCSAGSMRSACHVT ---------------CCTCCCAGCCGCCT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 234 Combined Motif Reverse Complement Reverse Complement AVHGTSRGGCRGSKSGGAGGCKGKAGCTGDYCCTC GTGTCKGGAGTTTGTTCCTT AVHGTSRGGCRGSKSGKRKCBKGRRKYTGTTCCTY Direction: Forward Position #: 16 Overlap #: 20 Alignment: AVHGTSRGGCRGSKSGGAGGCKGKAGCTGDYCCTC ---------------GTGTCKGGAGTTTGTTCCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 211 Combined Motif Reverse Complement Original Motif MAGGAACAMRMKCYBGRMRCSRSCMGCCKSACHVT GACTTCAAGAATGAAGCCG MAGGAACAMRMKCYBGACWYCARSARYSAVGCYGT Direction: Forward Position #: 16 Overlap #: 19 Alignment: MAGGAACAMRMKCYBGRMRCSRSCMGCCKSACHVT ---------------GACTTCAAGAATGAAGCCG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 246 Combined Motif Original Motif Original Motif MAGGAACAMRMKCYBGACWYCARSARYSAVGCYGT GCAGCTTCACTCCTGA MAGGAACAMRMKCYBGMMGCYWCRMKCCTGRCYGT Direction: Forward Position #: 16 Overlap #: 16 Alignment: MAGGAACAMRMKCYBGACWYCARSARYSAVGCYGT ---------------GCAGCTTCACTCCTGA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 285 Combined Motif Reverse Complement Reverse Complement ACKGKCAGGRRKGWMGCYRCBKGRRKYTGTTCCTY GCTGGAGTGCAGTG ACKGKCAGGRRKGWMGCTGSAGKGSAGTGTTCCTY Direction: Forward Position #: 16 Overlap #: 14 Alignment: ACKGKCAGGRRKGWMGCYRCBKGRRKYTGTTCCTY ---------------GCTGGAGTGCAGTG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 179 Combined Motif Reverse Complement Reverse Complement MAGGAACACTSCRCTSCAGCYWCRMKCCTGRCYGT GAATACCTCCTGAAGGACCT MAGGAACACTSCRCTGMAKMCHYMCTSMAGGMCST Direction: Forward Position #: 16 Overlap #: 20 Alignment: MAGGAACACTSCRCTSCAGCYWCRMKCCTGRCYGT ---------------GAATACCTCCTGAAGGACCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 3 Combined Motif Reverse Complement Original Motif ASGYCCTYSAGRMDGYRTRCAGKGSAGTGTTCCTY GCTGGAGTGCAGTGGCRYGA ASGYCCTYSAGRMDGBVTGGAGTGCAGTGKYSCKH Direction: Forward Position #: 16 Overlap #: 20 Alignment: ASGYCCTYSAGRMDGYRTRCAGKGSAGTGTTCCTY ---------------GCTGGAGTGCAGTGGCRYGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 105 Combined Motif Original Motif Reverse Complement ASGYCCTYSAGRMDGBVTGGAGTGCAGTGKYSCKH GGAGGTGTGGAGGGAGAGGC ASGYCCTYSAGRMDGGGWGGWGTGSAGKGRKASGM Direction: Forward Position #: 16 Overlap #: 20 Alignment: ASGYCCTYSAGRMDGBVTGGAGTGCAGTGKYSCKH ---------------GGAGGTGTGGAGGGAGAGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 1 Combined Motif Original Motif Original Motif ASGYCCTYSAGRMDGGGWGGWGTGSAGKGRKASGM GGGGTGACAGABGB ASGYCCTYSAGRMDGGGDGKKRYRGAKKGRKASGM Direction: Forward Position #: 16 Overlap #: 14 Alignment: ASGYCCTYSAGRMDGGGWGGWGTGSAGKGRKASGM ---------------GGGGTGACAGABGB------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 289 Combined Motif Original Motif Original Motif ASGYCCTYSAGRMDGGGDGKKRYRGAKKGRKASGM TGATGGGTGCACCAAA ASGYCCTYSAGRMDGKGAKGGGTGSASSRADASGM Direction: Forward Position #: 16 Overlap #: 16 Alignment: ASGYCCTYSAGRMDGGGDGKKRYRGAKKGRKASGM ---------------TGATGGGTGCACCAAA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 350 Combined Motif Original Motif Original Motif ASGYCCTYSAGRMDGKGAKGGGTGSASSRADASGM TCTGGAGTGGACCTCCAGCA ASGYCCTYSAGRMDGTSWGGRGTGGACCWMMAGSA Direction: Forward Position #: 16 Overlap #: 20 Alignment: ASGYCCTYSAGRMDGKGAKGGGTGSASSRADASGM ---------------TCTGGAGTGGACCTCCAGCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 149 Combined Motif Reverse Complement Original Motif TSCTRRWGGTCCACKCCWSACHYMCTSMAGGMCST ACTCAGCCCRCCTGCACCC TSCTRRWGGTCCACKMCTCASCCCVYCWRSACCCT Direction: Forward Position #: 16 Overlap #: 19 Alignment: TSCTRRWGGTCCACKCCWSACHYMCTSMAGGMCST ---------------ACTCAGCCCRCCTGCACCC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 133 Combined Motif Original Motif Original Motif TSCTRRWGGTCCACKMCTCASCCCVYCWRSACCCT CTGYGTCCCCA TSCTRRWGGTCCACKCYKYRKCCCCHCWRSACCCT Direction: Forward Position #: 16 Overlap #: 11 Alignment: TSCTRRWGGTCCACKMCTCASCCCVYCWRSACCCT ---------------CTGYGTCCCCA--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 142 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 142 Motif 272 Original Motif Original Motif CAGATGTC CAGCTGTCAC ACCAGMTGTC Direction: Backward Position #: 3 Overlap #: 8 Alignment: CAGATGTC-- CAGCTGTCAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 269 Reverse Complement Original Motif GACARCTGGT AGCGACATGTGC RRCRACWKGTGC Direction: Forward Position #: 1 Overlap #: 10 Alignment: GACARCTGGT-- AGCGACATGTGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 166 Reverse Complement Original Motif GCACRWGTMGMM AAGGGACATTKGAG AAGGGRCAYDTGWVGMM Direction: Forward Position #: 6 Overlap #: 9 Alignment: -----GCACRWGTMGMM AAGGGACATTKGAG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 216 Combined Motif Original Motif Original Motif AAGGGRCAYDTGWVGMM CAGAAATCACC AAGGGRCASAARTCRCC Direction: Forward Position #: 7 Overlap #: 11 Alignment: AAGGGRCAYDTGWVGMM ------CAGAAATCACC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 334 Combined Motif Original Motif Original Motif AAGGGRCASAARTCRCC CATCTGTCAC AAGGGRCATMWGTCACC Direction: Forward Position #: 7 Overlap #: 10 Alignment: AAGGGRCASAARTCRCC ------CATCTGTCAC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 307 Reverse Complement Original Motif GGTGACWRATGKCCCTT AGATGCCAGCCAGAGCTCT AGATGCCRGYSASAGMTSTCCCTT Direction: Forward Position #: 8 Overlap #: 12 Alignment: -------GGTGACWRATGKCCCTT AGATGCCAGCCAGAGCTCT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 225 Combined Motif Reverse Complement Reverse Complement AAGGGASARCTSTSKCKGGCATCT AAGTTCTKGGKTACATGTGC AAGGGASARCWMKKTCTGGSRTMYATGTGC Direction: Forward Position #: 11 Overlap #: 14 Alignment: AAGGGASARCTSTSKCKGGCATCT------ ----------AAGTTCTKGGKTACATGTGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 199 Combined Motif Reverse Complement Reverse Complement GCACATKYAKSCCAGARYYWGMTSTCCCTT GGTGCCAGCTGT GCACATKYAKSCCRGWRCYAGCTGTCCCTT Direction: Forward Position #: 14 Overlap #: 12 Alignment: GCACATKYAKSCCAGARYYWGMTSTCCCTT -------------GGTGCCAGCTGT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 291 Combined Motif Reverse Complement Original Motif AAGGGACAGCTKGMWCMGGSRTMYATGTGC CTGAGGACCTGAGGTCRTA AAGGGACAGCTKGCTSAGGVMYHBAKGTSSTA Direction: Forward Position #: 14 Overlap #: 17 Alignment: AAGGGACAGCTKGMWCMGGSRTMYATGTGC-- -------------CTGAGGACCTGAGGTCRTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 227 Combined Motif Original Motif Original Motif AAGGGACAGCTKGCTSAGGVMYHBAKGTSSTA CCCAAATCTCATSTTGAAT AAGGGACAGCTKGCYCMRRATCTCATGTBGWAT Direction: Forward Position #: 15 Overlap #: 18 Alignment: AAGGGACAGCTKGCTSAGGVMYHBAKGTSSTA- --------------CCCAAATCTCATSTTGAAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 230 Combined Motif Reverse Complement Reverse Complement ATWCVACATGAGATKKRGMGCYAGCTGTCCCTT TTTTCACATGCCTTTCT ATWCVACATGAGATTTKKCRCMWGCYKTYCYTT Direction: Forward Position #: 15 Overlap #: 17 Alignment: ATWCVACATGAGATKKRGMGCYAGCTGTCCCTT --------------TTTTCACATGCCTTTCT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 280 Combined Motif Reverse Complement Original Motif AAMGKARMGCWYGKGRRAAATCTCATGTBGWAT CCTAGATTTCAGARGATGT AAMGKARMGCWYGKSCTARATYTCAKRKGRTRT Direction: Forward Position #: 15 Overlap #: 19 Alignment: AAMGKARMGCWYGKGRRAAATCTCATGTBGWAT --------------CCTAGATTTCAGARGATGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 58 Combined Motif Reverse Complement Original Motif AKAKCRKYTGAMATMTAGSRCMWGCYKTYCYTT ATGGACAYTTRGGTTGHTTC AKAKCRKYTGAMATMTRGRMMHTKMBGTTSHTTC Direction: Forward Position #: 15 Overlap #: 19 Alignment: AKAKCRKYTGAMATMTAGSRCMWGCYKTYCYTT- --------------ATGGACAYTTRGGTTGHTTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 325 Combined Motif Original Motif Reverse Complement AKAKCRKYTGAMATMTRGRMMHTKMBGTTSHTTC TATTTACAGCTGCT AKAKCRKYTGAMATMTAKTTACWGCTGYTSHTTC Direction: Forward Position #: 16 Overlap #: 14 Alignment: AKAKCRKYTGAMATMTRGRMMHTKMBGTTSHTTC ---------------TATTTACAGCTGCT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 279 Combined Motif Original Motif Reverse Complement AKAKCRKYTGAMATMTAKTTACWGCTGYTSHTTC MGTGTGATGTCTCCCCC AKAKCRKYTGAMATMYRTGTRMTGYYKCYCCYTC Direction: Forward Position #: 16 Overlap #: 17 Alignment: AKAKCRKYTGAMATMTAKTTACWGCTGYTSHTTC ---------------MGTGTGATGTCTCCCCC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 306 Combined Motif Original Motif Original Motif AKAKCRKYTGAMATMYRTGTRMTGYYKCYCCYTC GACATGAGCTGGCGCTTG AKAKCRKYTGAMATMKAYRTGAKSTSGCBCTTKC Direction: Forward Position #: 16 Overlap #: 18 Alignment: AKAKCRKYTGAMATMYRTGTRMTGYYKCYCCYTC ---------------GACATGAGCTGGCGCTTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 344 Combined Motif Original Motif Original Motif AKAKCRKYTGAMATMKAYRTGAKSTSGCBCTTKC CATAGGAGATGAC AKAKCRKYTGAMATMCATAKGAGVTGRCBCTTKC Direction: Forward Position #: 16 Overlap #: 13 Alignment: AKAKCRKYTGAMATMKAYRTGAKSTSGCBCTTKC ---------------CATAGGAGATGAC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 35 Combined Motif Reverse Complement Original Motif GYAAGBGKCABCTCYTATGYATYTCAKRKGRTRT CAGAAATCACCCGTCTT GYAAGBGKCABCTCYYAKRWATCWCMBRTSWTRT Direction: Forward Position #: 16 Overlap #: 17 Alignment: GYAAGBGKCABCTCYTATGYATYTCAKRKGRTRT ---------------CAGAAATCACCCGTCTT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 97 Combined Motif Reverse Complement Reverse Complement AKAWSAMBYGWGATWKYTKKGAGVTGRCBCTTKC ATTCGGCCATCTT AKAWSAMBYGWGATWATTBGGMSATSTYBCTTKC Direction: Forward Position #: 16 Overlap #: 13 Alignment: AKAWSAMBYGWGATWKYTKKGAGVTGRCBCTTKC ---------------ATTCGGCCATCTT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 138 Combined Motif Reverse Complement Reverse Complement GYAAGBMASATSRCCBAATWATCWCMBRTSWTRT GGSKGATCTGGCTG GYAAGBMASATSRCCGRVKDATCTSVCDKSWTRT Direction: Forward Position #: 16 Overlap #: 14 Alignment: GYAAGBMASATSRCCBAATWATCWCMBRTSWTRT ---------------GGSKGATCTGGCTG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 132 Combined Motif Original Motif Original Motif GYAAGBMASATSRCCGRVKDATCTSVCDKSWTRT CAAGATGGCGGC GYAAGBMASATSRCCSAAGAWKSYGGCDKSWTRT Direction: Forward Position #: 16 Overlap #: 12 Alignment: GYAAGBMASATSRCCGRVKDATCTSVCDKSWTRT ---------------CAAGATGGCGGC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 293 Combined Motif Reverse Complement Original Motif AKAWSYDGCCKSYWTCTTSGGMSATSTYBCTTKC CTGACTGGGAGACACCTCCC AKAWSYDGCCKSYWTCTKASKSGRWGWCACYTBCC Direction: Forward Position #: 16 Overlap #: 19 Alignment: AKAWSYDGCCKSYWTCTTSGGMSATSTYBCTTKC- ---------------CTGACTGGGAGACACCTCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 25 Combined Motif Original Motif Reverse Complement AKAWSYDGCCKSYWTCTKASKSGRWGWCACYTBCC GTACCTCAGWTGGAAATG AKAWSYDGCCKSYWTSTACCTCRGWKGSAMMTGCC Direction: Forward Position #: 16 Overlap #: 18 Alignment: AKAWSYDGCCKSYWTCTKASKSGRWGWCACYTBCC ---------------GTACCTCAGWTGGAAATG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 261 Combined Motif Original Motif Original Motif AKAWSYDGCCKSYWTSTACCTCRGWKGSAMMTGCC ATCTCASAAATCACCACTA AKAWSYDGCCKSYWTRTMYCWSARATSVMCAYKMC Direction: Forward Position #: 16 Overlap #: 19 Alignment: AKAWSYDGCCKSYWTSTACCTCRGWKGSAMMTGCC ---------------ATCTCASAAATCACCACTA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 99 Combined Motif Original Motif Original Motif AKAWSYDGCCKSYWTRTMYCWSARATSVMCAYKMC GCAAAKGACATGATYTCATT AKAWSYDGCCKSYWTRYAWMDSAVATGAHCWYDHY Direction: Forward Position #: 16 Overlap #: 20 Alignment: AKAWSYDGCCKSYWTRTMYCWSARATSVMCAYKMC ---------------GCAAAKGACATGATYTCATT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 245 Combined Motif Reverse Complement Reverse Complement KHDKWGHTCATVTSDYWTMMAWKSYGGCDKSWTRT TTGAGGAGGCAGTCTG KHDKWGHTCATVTSDTTKASRAGGCRGYBTGWTRT Direction: Forward Position #: 16 Overlap #: 16 Alignment: KHDKWGHTCATVTSDYWTMMAWKSYGGCDKSWTRT ---------------TTGAGGAGGCAGTCTG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 123 Combined Motif Original Motif Reverse Complement KHDKWGHTCATVTSDTTKASRAGGCRGYBTGWTRT CTCAGACTGCT KHDKWGHTCATVTSDYTCAGAMKGCDGYBTGWTRT Direction: Forward Position #: 16 Overlap #: 11 Alignment: KHDKWGHTCATVTSDTTKASRAGGCRGYBTGWTRT ---------------CTCAGACTGCT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 353 Combined Motif Reverse Complement Original Motif AKAWCABMCDGCRRTCTGAKDSAVATGAHCWYDHY CACATGGAAGC AKAWCABMCDGCRRTCWCATGGAARYGAHCWYDHY Direction: Forward Position #: 16 Overlap #: 11 Alignment: AKAWCABMCDGCRRTCTGAKDSAVATGAHCWYDHY ---------------CACATGGAAGC--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 324 Combined Motif Original Motif Reverse Complement AKAWCABMCDGCRRTCWCATGGAARYGAHCWYDHY TACAGGTGCGT AKAWCABMCDGCRRTYACAKGKRMGTGAHCWYDHY Direction: Forward Position #: 16 Overlap #: 11 Alignment: AKAWCABMCDGCRRTCWCATGGAARYGAHCWYDHY ---------------TACAGGTGCGT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 1 Combined Motif Reverse Complement Reverse Complement KHDKWGHTCACRMRCYTGTMAMKGCDGYBTGWTRT BCVTCTGTCACCCC KHDKWGHTCACRMRCYYVTCWGTSMHSCCTGWTRT Direction: Forward Position #: 16 Overlap #: 14 Alignment: KHDKWGHTCACRMRCYTGTMAMKGCDGYBTGWTRT ---------------BCVTCTGTCACCCC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 357 Combined Motif Reverse Complement Reverse Complement AKAWCAGGSDYSACWGAVMKGKRMGTGAHCWYDHY TAATTTTATGTGTCAACTTG AKAWCAGGSDYSACWKAAWTKTAHGTGWCMACTTB Direction: Forward Position #: 16 Overlap #: 20 Alignment: AKAWCAGGSDYSACWGAVMKGKRMGTGAHCWYDHY ---------------TAATTTTATGTGTCAACTTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 294 Combined Motif Reverse Complement Original Motif BAAGTYGWCACDTARAWTTRWGTSMHSCCTGWTRT AGCTGTGAGAAGAGGGCCAC BAAGTYGWCACDTARARYTGTGWGAAGMSKGCYAY Direction: Forward Position #: 16 Overlap #: 20 Alignment: BAAGTYGWCACDTARAWTTRWGTSMHSCCTGWTRT ---------------AGCTGTGAGAAGAGGGCCAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 202 Combined Motif Original Motif Original Motif BAAGTYGWCACDTARARYTGTGWGAAGMSKGCYAY ACACATCACAAAGCAGTTTC BAAGTYGWCACDTARASMYRTSASAARVCRGTTWC Direction: Forward Position #: 16 Overlap #: 20 Alignment: BAAGTYGWCACDTARARYTGTGWGAAGMSKGCYAY ---------------ACACATCACAAAGCAGTTTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 211 Combined Motif Original Motif Original Motif BAAGTYGWCACDTARASMYRTSASAARVCRGTTWC GACTTCAAGAATGAAGCCG BAAGTYGWCACDTARRMCTWYMAGAADGMAGYYDC Direction: Forward Position #: 16 Overlap #: 19 Alignment: BAAGTYGWCACDTARASMYRTSASAARVCRGTTWC ---------------GACTTCAAGAATGAAGCCG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 190 Combined Motif Original Motif Original Motif BAAGTYGWCACDTARRMCTWYMAGAADGMAGYYDC CAAAGGCATAAGAATGAT BAAGTYGWCACDTARVAMWKBCAKAAGRAWGMTDC Direction: Forward Position #: 16 Overlap #: 18 Alignment: BAAGTYGWCACDTARRMCTWYMAGAADGMAGYYDC ---------------CAAAGGCATAAGAATGAT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 350 Combined Motif Reverse Complement Reverse Complement GHAYCWTKCTTRTGBYWYTVKTAHGTGWCMACTTB TGCTGGAGGTCCACTCCAGA GHAYCWTKCTTRTGBTKCTGGWRBKYSACWMCWKV Direction: Forward Position #: 16 Overlap #: 20 Alignment: GHAYCWTKCTTRTGBYWYTVKTAHGTGWCMACTTB ---------------TGCTGGAGGTCCACTCCAGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 260 Combined Motif Reverse Complement Original Motif BYWGRWGTSKRBMWCCAGYABCAKAAGRAWGMTDC GGTGCCCCTCTGGGACRAA BYWGRWGTSKRBMWCSRKVMCCMTMWGRRASRWAC Direction: Forward Position #: 16 Overlap #: 19 Alignment: BYWGRWGTSKRBMWCCAGYABCAKAAGRAWGMTDC ---------------GGTGCCCCTCTGGGACRAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 264 Combined Motif Original Motif Reverse Complement BYWGRWGTSKRBMWCSRKVMCCMTMWGRRASRWAC TGTGACCTTGG BYWGRWGTSKRBMWCBGTGACCHTVKGRRASRWAC Direction: Forward Position #: 16 Overlap #: 11 Alignment: BYWGRWGTSKRBMWCSRKVMCCMTMWGRRASRWAC ---------------TGTGACCTTGG--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 275 Combined Motif Original Motif Reverse Complement BYWGRWGTSKRBMWCBGTGACCHTVKGRRASRWAC TTTAACTCTGTGAG BYWGRWGTSKRBMWCTKTRACYCTGTGAGASRWAC Direction: Forward Position #: 16 Overlap #: 14 Alignment: BYWGRWGTSKRBMWCBGTGACCHTVKGRRASRWAC ---------------TTTAACTCTGTGAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 49 Combined Motif Reverse Complement Reverse Complement GTWKSTCTCACAGMGTKARAGWRBKYSACWMCWKV GGRRMCAGATGT GTWKSTCTCACAGMGKKARASAGRTSBACWMCWKV Direction: Forward Position #: 16 Overlap #: 12 Alignment: GTWKSTCTCACAGMGTKARAGWRBKYSACWMCWKV ---------------GGRRMCAGATGT-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 309 Combined Motif Reverse Complement Original Motif BYWGRWGTVSAKCTSTMTYRCYCTGTGAGASRWAC CATTCTGGGGTCTGGAGGAY BYWGRWGTVSAKCTSYATTCYBSKGTSWGRAGDAY Direction: Forward Position #: 16 Overlap #: 20 Alignment: BYWGRWGTVSAKCTSTMTYRCYCTGTGAGASRWAC ---------------CATTCTGGGGTCTGGAGGAY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 303 Combined Motif Original Motif Original Motif BYWGRWGTVSAKCTSYATTCYBSKGTSWGRAGDAY AGTTCTTAAAGATGGT BYWGRWGTVSAKCTSMRTTCTTADRKVTGGHGDAY Direction: Forward Position #: 16 Overlap #: 16 Alignment: BYWGRWGTVSAKCTSYATTCYBSKGTSWGRAGDAY ---------------AGTTCTTAAAGATGGT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 257 Combined Motif Reverse Complement Original Motif KTHCHCCABYKDTAAGAAMYSAGRTSBACWMCWKV GAGAACACATGGACA KTHCHCCABYKDTAAGARAACASATGGACAMCWKV Direction: Forward Position #: 16 Overlap #: 15 Alignment: KTHCHCCABYKDTAAGAAMYSAGRTSBACWMCWKV ---------------GAGAACACATGGACA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 63 Combined Motif Original Motif Reverse Complement KTHCHCCABYKDTAAGARAACASATGGACAMCWKV AAAMAMMKMATGTTCTCACT KTHCHCCABYKDTAARAAMACMSMWKGWYMTCAST Direction: Forward Position #: 16 Overlap #: 20 Alignment: KTHCHCCABYKDTAAGARAACASATGGACAMCWKV ---------------AAAMAMMKMATGTTCTCACT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 137 Combined Motif Reverse Complement Original Motif ASTGARMWCRWYSYGTYTTKTTADRKVTGGHGDAY AGGTTTGTTACATAGGTAWA ASTGARMWCRWYSYGWBKTTTKWTABATRGGKAWM Direction: Forward Position #: 16 Overlap #: 20 Alignment: ASTGARMWCRWYSYGTYTTKTTADRKVTGGHGDAY ---------------AGGTTTGTTACATAGGTAWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 165 Combined Motif Original Motif Reverse Complement ASTGARMWCRWYSYGWBKTTTKWTABATRGGKAWM AGCTCMKCCTCCTGTCAGAT ASTGARMWCRWYSYGAGSTYYKCYWCMTGKSARAT Direction: Forward Position #: 16 Overlap #: 20 Alignment: ASTGARMWCRWYSYGWBKTTTKWTABATRGGKAWM ---------------AGCTCMKCCTCCTGTCAGAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 329 Combined Motif Reverse Complement Reverse Complement ATMTSRCARGWKGYMKASCTCMSMWKGWYMTCAST GCTAATATATCCCTCCC ATMTSRCARGWKGYMGMTMWYATATCSYTCCCAST Direction: Forward Position #: 16 Overlap #: 17 Alignment: ATMTSRCARGWKGYMKASCTCMSMWKGWYMTCAST ---------------GCTAATATATCCCTCCC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 271 Combined Motif Original Motif Reverse Complement ATMTSRCARGWKGYMGMTMWYATATCSYTCCCAST KGCAACCTAGATCCCT ATMTSRCARGWKGYMKVYAACMTAKMYCYCYCAST Direction: Forward Position #: 16 Overlap #: 16 Alignment: ATMTSRCARGWKGYMGMTMWYATATCSYTCCCAST ---------------KGCAACCTAGATCCCT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 235 Combined Motif Original Motif Reverse Complement ATMTSRCARGWKGYMKVYAACMTAKMYCYCYCAST GCCAATTTCTCCCATTTGGA ATMTSRCARGWKGYMGCCAAYYTMTCCCHYTYRGA Direction: Forward Position #: 16 Overlap #: 20 Alignment: ATMTSRCARGWKGYMKVYAACMTAKMYCYCYCAST ---------------GCCAATTTCTCCCATTTGGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 217 Combined Motif Original Motif Original Motif ATMTSRCARGWKGYMGCCAAYYTMTCCCHYTYRGA CCCTACTGTTCTCY ATMTSRCARGWKGYMSCCWAYTKYTCTCHYTYRGA Direction: Forward Position #: 16 Overlap #: 14 Alignment: ATMTSRCARGWKGYMGCCAAYYTMTCCCHYTYRGA ---------------CCCTACTGTTCTCY------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 173 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 173 Motif 234 Reverse Complement Reverse Complement TTGTTTCCTT GTGTCKGGAGTTTGTTCCTT GTGTCKGGAGTTKKTTCCTT Direction: Forward Position #: 11 Overlap #: 10 Alignment: ----------TTGTTTCCTT GTGTCKGGAGTTTGTTCCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 41 Combined Motif Reverse Complement Original Motif AAGGAARRAACTCCRGACAC AAAYAAAAAAA AAGGAARRAAMTMMARAMAC Direction: Forward Position #: 9 Overlap #: 11 Alignment: AAGGAARRAACTCCRGACAC --------AAAYAAAAAAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 54 Combined Motif Reverse Complement Reverse Complement GTRTMTYYAYTTKKTTCCTT TTTCTTTTCCTT GTRTMTYYWTTYTTTTCCTT Direction: Forward Position #: 9 Overlap #: 12 Alignment: GTRTMTYYAYTTKKTTCCTT --------TTTCTTTTCCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 7 Combined Motif Original Motif Reverse Complement GTRTMTYYWTTYTTTTCCTT TTTYTWTTTTTTYTWGAGAC GTRTMTYYTTTYTTTTYYTTYTWGAGAC Direction: Forward Position #: 9 Overlap #: 12 Alignment: GTRTMTYYWTTYTTTTCCTT-------- --------TTTYTWTTTTTTYTWGAGAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 158 Combined Motif Reverse Complement Reverse Complement GTCTCWAMAAMMAAAAMAAAMMARAMAC TCAGCAAACTA GTCTCWAMAAMMWMARCAAACTARAMAC Direction: Forward Position #: 13 Overlap #: 11 Alignment: GTCTCWAMAAMMAAAAMAAAMMARAMAC ------------TCAGCAAACTA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 79 Combined Motif Reverse Complement Reverse Complement GTRTMTAGTTTGMTYWYYTTYTWGAGAC ATTCATTCATT GTRTMTAGTTTGATTMATTYWTTGAGAC Direction: Forward Position #: 13 Overlap #: 11 Alignment: GTRTMTAGTTTGMTYWYYTTYTWGAGAC ------------ATTCATTCATT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 290 Combined Motif Original Motif Reverse Complement GTRTMTAGTTTGATTMATTYWTTGAGAC CTGTTTGCCTGGGTATCA GTRTMTAGTTTGMTKTTTKCCTKGRKAYCA Direction: Forward Position #: 13 Overlap #: 16 Alignment: GTRTMTAGTTTGATTMATTYWTTGAGAC-- ------------CTGTTTGCCTGGGTATCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 99 Combined Motif Reverse Complement Original Motif TGMTRKCYAGGRAAAYARCAAACTARAMAC GCAAAKGACATGATYTCATT TGMTRKCYAGGRARMAAABRAMMTRAWCWCATT Direction: Forward Position #: 14 Overlap #: 17 Alignment: TGMTRKCYAGGRAAAYARCAAACTARAMAC--- -------------GCAAAKGACATGATYTCATT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 336 Combined Motif Reverse Complement Reverse Complement AATGWGWTKAYRTKBTTTRMTKCCTKGRKAYCA CAGGTGGTKTTTGGTTACAT AATGWGWTKAYRTKCWKKKVKTBYTTGGTWACAT Direction: Forward Position #: 15 Overlap #: 19 Alignment: AATGWGWTKAYRTKBTTTRMTKCCTKGRKAYCA- --------------CAGGTGGTKTTTGGTTACAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 137 Combined Motif Original Motif Original Motif AATGWGWTKAYRTKCWKKKVKTBYTTGGTWACAT AGGTTTGTTACATAGGTAWA AATGWGWTKAYRTKCAGGTTTKTTWYRKWDRYATA Direction: Forward Position #: 16 Overlap #: 19 Alignment: AATGWGWTKAYRTKCWKKKVKTBYTTGGTWACAT- ---------------AGGTTTGTTACATAGGTAWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 103 Combined Motif Original Motif Original Motif AATGWGWTKAYRTKCAGGTTTKTTWYRKWDRYATA AAGTGAAATAA AATGWGWTKAYRTKCARGTGWRDTAARKWDRYATA Direction: Forward Position #: 16 Overlap #: 11 Alignment: AATGWGWTKAYRTKCAGGTTTKTTWYRKWDRYATA ---------------AAGTGAAATAA--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 326 Combined Motif Reverse Complement Original Motif TATKMHWRMTTADKWCACKTGRAMMTRAWCWCATT GACATGGAGTCAAAGG TATKMHWRMTTADKWSACATGGAVWYAAAVDCATT Direction: Forward Position #: 16 Overlap #: 16 Alignment: TATKMHWRMTTADKWCACKTGRAMMTRAWCWCATT ---------------GACATGGAGTCAAAGG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 16 Combined Motif Reverse Complement Reverse Complement AATGDVTTTKWVTCCATGTSWRDTAARKWDRYATA GGGTCAGGGAGTTCCCTTTC AATGDVTTTKWVTCCRGGTCAGGKADKTHBCTWTM Direction: Forward Position #: 16 Overlap #: 20 Alignment: AATGDVTTTKWVTCCATGTSWRDTAARKWDRYATA ---------------GGGTCAGGGAGTTCCCTTTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 139 Combined Motif Reverse Complement Original Motif RAWAGBDARHTYCCTGACCMGGAVWYAAAVDCATT AGCCYCTGGYAACCAYYAWT RAWAGBDARHTYCCTRRCCCSKRGYMAMMRHCATT Direction: Forward Position #: 16 Overlap #: 20 Alignment: RAWAGBDARHTYCCTGACCMGGAVWYAAAVDCATT ---------------AGCCYCTGGYAACCAYYAWT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 356 Combined Motif Original Motif Original Motif RAWAGBDARHTYCCTRRCCCSKRGYMAMMRHCATT AATTAAAAGACACAGACTG RAWAGBDARHTYCCTAAYYAVAAGWCACAGACWKT Direction: Forward Position #: 16 Overlap #: 19 Alignment: RAWAGBDARHTYCCTRRCCCSKRGYMAMMRHCATT ---------------AATTAAAAGACACAGACTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 304 Combined Motif Original Motif Reverse Complement RAWAGBDARHTYCCTAAYYAVAAGWCACAGACWKT AGCAGYTTGGAAACACT RAWAGBDARHTYCCTARCWRHTWGRAAMMRMYWKT Direction: Forward Position #: 16 Overlap #: 17 Alignment: RAWAGBDARHTYCCTAAYYAVAAGWCACAGACWKT ---------------AGCAGYTTGGAAACACT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 248 Combined Motif Reverse Complement Reverse Complement AYWMRKRYTTMCWADMWGMTAGGKADKTHBCTWTM TTTGTACCCATTA AYWMRKRYTTMCWADTTKVTAVSBATTWHBCTWTM Direction: Forward Position #: 16 Overlap #: 13 Alignment: AYWMRKRYTTMCWADMWGMTAGGKADKTHBCTWTM ---------------TTTGTACCCATTA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 135 Combined Motif Original Motif Reverse Complement AYWMRKRYTTMCWADTTKVTAVSBATTWHBCTWTM CTGGGCAACAAGAG AYWMRKRYTTMCWADCTGGKMMACAWKAGBCTWTM Direction: Forward Position #: 16 Overlap #: 14 Alignment: AYWMRKRYTTMCWADTTKVTAVSBATTWHBCTWTM ---------------CTGGGCAACAAGAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 221 Combined Motif Reverse Complement Original Motif RAWAGBCTYWTGTYYYCCAGHTWGRAAMMRMYWKT GGGAGGAAGGGGACAC RAWAGBCTYWTGTYYBSSAGGAAGGRRACACYWKT Direction: Forward Position #: 16 Overlap #: 16 Alignment: RAWAGBCTYWTGTYYYCCAGHTWGRAAMMRMYWKT ---------------GGGAGGAAGGGGACAC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 24 Combined Motif Reverse Complement Original Motif AYWMGTGTMMCCTTCCTSSBMMACAWKAGBCTWTM CKAGTCAAAGAAA AYWMGTGTMMCCTTCCTAGTCAAMRARAGBCTWTM Direction: Forward Position #: 16 Overlap #: 13 Alignment: AYWMGTGTMMCCTTCCTSSBMMACAWKAGBCTWTM ---------------CKAGTCAAAGAAA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 58 Combined Motif Original Motif Original Motif AYWMGTGTMMCCTTCCTAGTCAAMRARAGBCTWTM ATGGACAYTTRGGTTGHTTC AYWMGTGTMMCCTTCMTRGDCAHHDARRKTGTTTC Direction: Forward Position #: 16 Overlap #: 20 Alignment: AYWMGTGTMMCCTTCCTAGTCAAMRARAGBCTWTM ---------------ATGGACAYTTRGGTTGHTTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 117 Combined Motif Reverse Complement Original Motif GAAACARKMTDHHTGDCMARGAAGGRRACACYWKT AACAACAACAACAAMAA GAAACARKMTDHHTGAMCAASAASRAVAMAMHWKT Direction: Forward Position #: 16 Overlap #: 17 Alignment: GAAACARKMTDHHTGDCMARGAAGGRRACACYWKT ---------------AACAACAACAACAAMAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 281 Combined Motif Original Motif Original Motif GAAACARKMTDHHTGAMCAASAASRAVAMAMHWKT AAATGGAATCAT GAAACARKMTDHHTGAAMWRGAATMAHAMAMHWKT Direction: Forward Position #: 16 Overlap #: 12 Alignment: GAAACARKMTDHHTGAMCAASAASRAVAMAMHWKT ---------------AAATGGAATCAT-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 195 Combined Motif Original Motif Original Motif GAAACARKMTDHHTGAAMWRGAATMAHAMAMHWKT TAAAAGACTACAWATTGGGT GAAACARKMTDHHTGWAAAAGAMTAMHAAWWDDGT Direction: Forward Position #: 16 Overlap #: 20 Alignment: GAAACARKMTDHHTGAAMWRGAATMAHAMAMHWKT ---------------TAAAAGACTACAWATTGGGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 214 Combined Motif Original Motif Original Motif GAAACARKMTDHHTGWAAAAGAMTAMHAAWWDDGT CTCAGGAATGGAAAACC GAAACARKMTDHHTGYWMARGAATRGAAAACCDGT Direction: Forward Position #: 16 Overlap #: 17 Alignment: GAAACARKMTDHHTGWAAAAGAMTAMHAAWWDDGT ---------------CTCAGGAATGGAAAACC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 112 Combined Motif Reverse Complement Reverse Complement ACHGGTTTTCMATTCMTRWKCAHHDARRKTGTTTC CTTGCCCAAGGTCACACAGC ACHGGTTTTCMATTCCTKDVCMAAKRKVWYRYWKC Direction: Forward Position #: 16 Overlap #: 20 Alignment: ACHGGTTTTCMATTCMTRWKCAHHDARRKTGTTTC ---------------CTTGCCCAAGGTCACACAGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 64 Combined Motif Reverse Complement Original Motif GRWKKKWVYMYTTYGVHRAGGAATRGAAAACCDGT GAAGGCAGCTAAGGCCCGGY GRWKKKWVYMYTTYGGAARGSARYDAARRMCCGGT Direction: Forward Position #: 16 Overlap #: 20 Alignment: GRWKKKWVYMYTTYGVHRAGGAATRGAAAACCDGT ---------------GAAGGCAGCTAAGGCCCGGY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 213 Combined Motif Original Motif Original Motif GRWKKKWVYMYTTYGGAARGSARYDAARRMCCGGT AAYRGACTAATACA GRWKKKWVYMYTTYGRAHRGMMTMADAVAMCCGGT Direction: Forward Position #: 16 Overlap #: 14 Alignment: GRWKKKWVYMYTTYGGAARGSARYDAARRMCCGGT ---------------AAYRGACTAATACA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 235 Combined Motif Original Motif Original Motif GRWKKKWVYMYTTYGRAHRGMMTMADAVAMCCGGT TCCAAATGGGAGAAATTGGC GRWKKKWVYMYTTYGWMCARAHGRRARAAAYYGGY Direction: Forward Position #: 16 Overlap #: 20 Alignment: GRWKKKWVYMYTTYGRAHRGMMTMADAVAMCCGGT ---------------TCCAAATGGGAGAAATTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 357 Combined Motif Reverse Complement Reverse Complement KCCMMTTTMTMMCHTKTGRWCMAAKRKVWYRYWKC TAATTTTATGTGTCAACTTG KCCMMTTTMTMMCHTTWRKWYHAWGTGTMMACTTS Direction: Forward Position #: 16 Overlap #: 20 Alignment: KCCMMTTTMTMMCHTKTGRWCMAAKRKVWYRYWKC ---------------TAATTTTATGTGTCAACTTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 328 Combined Motif Original Motif Reverse Complement KCCMMTTTMTMMCHTTWRKWYHAWGTGTMMACTTS KACATTGATTTTGTATC KCCMMTTTMTMMCHTKAMDTTKATKTKBTAWCTTS Direction: Forward Position #: 16 Overlap #: 17 Alignment: KCCMMTTTMTMMCHTTWRKWYHAWGTGTMMACTTS ---------------KACATTGATTTTGTATC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 194 Combined Motif Original Motif Reverse Complement KCCMMTTTMTMMCHTKAMDTTKATKTKBTAWCTTS CAGCTACTCKTATACCCTTG KCCMMTTTMTMMCHTYAGCTWCWYKTWTWMHCTTG Direction: Forward Position #: 16 Overlap #: 20 Alignment: KCCMMTTTMTMMCHTKAMDTTKATKTKBTAWCTTS ---------------CAGCTACTCKTATACCCTTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 176 Combined Motif Reverse Complement Original Motif CAAGDRWAWARKWGWAGCTKAHGRRARAAAYYGGY AGGCCCCAGTGTSTGTTGTT CAAGDRWAWARKWGWAGBYCMYRGKRTVWRTTGKT Direction: Forward Position #: 16 Overlap #: 20 Alignment: CAAGDRWAWARKWGWAGCTKAHGRRARAAAYYGGY ---------------AGGCCCCAGTGTSTGTTGTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 344 Combined Motif Reverse Complement Reverse Complement ARCAAKWVAMRCKKRGKBCTWCWYKTWTWMHCTTG GTCATCTCCTATG ARCAAKWVAMRCKKRGTCMTCTYCTWTKWMHCTTG Direction: Forward Position #: 16 Overlap #: 13 Alignment: ARCAAKWVAMRCKKRGKBCTWCWYKTWTWMHCTTG ---------------GTCATCTCCTATG------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 231 Combined Motif Reverse Complement Original Motif CAAGDRWYAWAGKAGAYGACMYRGKRTVWRTTGKT ACAAGGCAAGTCCCTTCY CAAGDRWYAWAGKAGAYRASSCARGTBCHTTYBKT Direction: Forward Position #: 16 Overlap #: 18 Alignment: CAAGDRWYAWAGKAGAYGACMYRGKRTVWRTTGKT ---------------ACAAGGCAAGTCCCTTCY-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 129 Combined Motif Reverse Complement Reverse Complement ARBKAADGBACKTGSSTKKTCTYCTWTKWMHCTTG TGAGKCAATTAAACCTCTT ARBKAADGBACKTGSYKWGTCDAYTAARMCTCTTG Direction: Forward Position #: 16 Overlap #: 19 Alignment: ARBKAADGBACKTGSSTKKTCTYCTWTKWMHCTTG ---------------TGAGKCAATTAAACCTCTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 241 Combined Motif Original Motif Reverse Complement ARBKAADGBACKTGSYKWGTCDAYTAARMCTCTTG TCGTTCACTCAGTGC ARBKAADGBACKTGSTBGKTCACTYARTSCTCTTG Direction: Forward Position #: 16 Overlap #: 15 Alignment: ARBKAADGBACKTGSYKWGTCDAYTAARMCTCTTG ---------------TCGTTCACTCAGTGC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 189 Combined Motif Reverse Complement Original Motif CAAGAGSAMTKAGTGARCBASCARGTBCHTTYBKT ATCCAGTCTATCATTG CAAGAGSAMTKAGTGAWCCAGYMWRTCMYTKYBKT Direction: Forward Position #: 16 Overlap #: 16 Alignment: CAAGAGSAMTKAGTGARCBASCARGTBCHTTYBKT ---------------ATCCAGTCTATCATTG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 224 Combined Motif Original Motif Original Motif CAAGAGSAMTKAGTGAWCCAGYMWRTCMYTKYBKT AATGAGTTAAGACTTTG CAAGAGSAMTKAGTGAAYSAGTHAAKMCTTTBBKT Direction: Forward Position #: 16 Overlap #: 17 Alignment: CAAGAGSAMTKAGTGAWCCAGYMWRTCMYTKYBKT ---------------AATGAGTTAAGACTTTG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 327 Combined Motif Original Motif Original Motif CAAGAGSAMTKAGTGAAYSAGTHAAKMCTTTBBKT AGGAGGAAGTCAATTTC CAAGAGSAMTKAGTGARBRRGWARWBAMTTTCBKT Direction: Forward Position #: 16 Overlap #: 17 Alignment: CAAGAGSAMTKAGTGAAYSAGTHAAKMCTTTBBKT ---------------AGGAGGAAGTCAATTTC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 182 Combined Motif Original Motif Original Motif CAAGAGSAMTKAGTGARBRRGWARWBAMTTTCBKT GACCAMGAACCCA CAAGAGSAMTKAGTGRACCARRAAYCMATTTCBKT Direction: Forward Position #: 16 Overlap #: 13 Alignment: CAAGAGSAMTKAGTGARBRRGWARWBAMTTTCBKT ---------------GACCAMGAACCCA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 19 Combined Motif Original Motif Original Motif CAAGAGSAMTKAGTGRACCARRAAYCMATTTCBKT CACCAGGAGATTATATCCCR CAAGAGSAMTKAGTGVACCAGGARAYYATWTCCYD Direction: Forward Position #: 16 Overlap #: 20 Alignment: CAAGAGSAMTKAGTGRACCARRAAYCMATTTCBKT ---------------CACCAGGAGATTATATCCCR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 106 Combined Motif Original Motif Original Motif CAAGAGSAMTKAGTGVACCAGGARAYYATWTCCYD ATTGGTGTATTTACAATCCC CAAGAGSAMTKAGTGAWYSRKGWRWTTAYAWYCCB Direction: Forward Position #: 16 Overlap #: 20 Alignment: CAAGAGSAMTKAGTGVACCAGGARAYYATWTCCYD ---------------ATTGGTGTATTTACAATCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 211 Combined Motif Original Motif Reverse Complement CAAGAGSAMTKAGTGAWYSRKGWRWTTAYAWYCCB CGGCTTCATTCTTGAAGTC CAAGAGSAMTKAGTGMKKCKTSADTYTWBAAGYCB Direction: Forward Position #: 16 Overlap #: 19 Alignment: CAAGAGSAMTKAGTGAWYSRKGWRWTTAYAWYCCB ---------------CGGCTTCATTCTTGAAGTC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 63 Combined Motif Reverse Complement Original Motif BGMCTTBWAKADTSARGYYRCACTYARTSCTCTTG AGTGAGAACATRYRRTRTTT BGMCTTBWAKADTSAAGTBASAMYHWRHGVTSTTK Direction: Forward Position #: 16 Overlap #: 20 Alignment: BGMCTTBWAKADTSARGYYRCACTYARTSCTCTTG ---------------AGTGAGAACATRYRRTRTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 257 Combined Motif Original Motif Original Motif BGMCTTBWAKADTSAAGTBASAMYHWRHGVTSTTK GAGAACACATGGACA BGMCTTBWAKADTSARRKDACACHTDGASATSTTK Direction: Forward Position #: 16 Overlap #: 15 Alignment: BGMCTTBWAKADTSAAGTBASAMYHWRHGVTSTTK ---------------GAGAACACATGGACA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 102 Combined Motif Reverse Complement Original Motif RAASATSTCHAHGTGTDYKMTSADTYTWBAAGYCB CTCATTTAATCCTCACAAC RAASATSTCHAHGTGYTCDYTBAATCYTCAMDHCB Direction: Forward Position #: 16 Overlap #: 19 Alignment: RAASATSTCHAHGTGTDYKMTSADTYTWBAAGYCB ---------------CTCATTTAATCCTCACAAC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 262 Combined Motif Reverse Complement Reverse Complement BGHDYTGAMGATTVAMDGAMCACHTDGASATSTTK GACAGGAGATTAACACTGAG BGHDYTGAMGATTVAGASARSASATTRACAYTKWG Direction: Forward Position #: 16 Overlap #: 20 Alignment: BGHDYTGAMGATTVAMDGAMCACHTDGASATSTTK ---------------GACAGGAGATTAACACTGAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 246 Combined Motif Reverse Complement Original Motif CWYAKTGTKAATSTSMTSTCTBAATCYTCAMDHCB GCAGCTTCACTCCTGA CWYAKTGTKAATSTSGYRKCTTMAYYCYTRADHCB Direction: Forward Position #: 16 Overlap #: 16 Alignment: CWYAKTGTKAATSTSMTSTCTBAATCYTCAMDHCB ---------------GCAGCTTCACTCCTGA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 216 Combined Motif Original Motif Original Motif CWYAKTGTKAATSTSGYRKCTTMAYYCYTRADHCB CAGAAATCACC CWYAKTGTKAATSTSCHGRMWTCACYCYTRADHCB Direction: Forward Position #: 16 Overlap #: 11 Alignment: CWYAKTGTKAATSTSGYRKCTTMAYYCYTRADHCB ---------------CAGAAATCACC--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 41 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 41 Motif 7 Original Motif Original Motif AAAYAAAAAAA GTCTCWAMAAAAAAWAMAAA AAAAAAAAAAAGTCTCWAMA Direction: Backward Position #: 1 Overlap #: 11 Alignment: ---------AAAYAAAAAAA GTCTCWAMAAAAAAWAMAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 54 Combined Motif Reverse Complement Reverse Complement TYTWGAGACTTTTTTTTTTT TTTCTTTTCCTT TYTWGAGAYTTYTTTTHYTT Direction: Forward Position #: 9 Overlap #: 12 Alignment: TYTWGAGACTTTTTTTTTTT --------TTTCTTTTCCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 117 Combined Motif Original Motif Reverse Complement TYTWGAGAYTTYTTTTHYTT TTYTTGTTGTTGTTGTT TYTWGAGATTTTTKTTBTTKTTGTT Direction: Forward Position #: 9 Overlap #: 12 Alignment: TYTWGAGAYTTYTTTTHYTT----- --------TTYTTGTTGTTGTTGTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 106 Combined Motif Original Motif Original Motif TYTWGAGATTTTTKTTBTTKTTGTT ATTGGTGTATTTACAATCCC TYTWGAGATTWTTGKTGTWTTTRYWATCCC Direction: Forward Position #: 11 Overlap #: 15 Alignment: TYTWGAGATTTTTKTTBTTKTTGTT----- ----------ATTGGTGTATTTACAATCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 328 Combined Motif Reverse Complement Original Motif GGGATWKKAAAWACAYCAAWAATCTCWAMA GATACAAAATCAATGTR GGGATWKKAAAWASATMMAAAATCWMWRWA Direction: Forward Position #: 14 Overlap #: 17 Alignment: GGGATWKKAAAWACAYCAAWAATCTCWAMA -------------GATACAAAATCAATGTR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 356 Combined Motif Original Motif Original Motif GGGATWKKAAAWASATMMAAAATCWMWRWA AATTAAAAGACACAGACTG GGGATWKKAAAWARATTAAAARWCACAGAHTG Direction: Forward Position #: 14 Overlap #: 17 Alignment: GGGATWKKAAAWASATMMAAAATCWMWRWA-- -------------AATTAAAAGACACAGACTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 63 Combined Motif Original Motif Original Motif GGGATWKKAAAWARATTAAAARWCACAGAHTG AGTGAGAACATRYRRTRTTT GGGATWKKAAAWARAKTRARAAYMWVHGRTKKTT Direction: Forward Position #: 15 Overlap #: 18 Alignment: GGGATWKKAAAWARATTAAAARWCACAGAHTG-- --------------AGTGAGAACATRYRRTRTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 103 Combined Motif Reverse Complement Reverse Complement AAYRAKCHBWYKTTMTMAYTKTWTTTRYWATCCC TTATTTCACTT AAYRAKCHBWYKTTMTTATTTYAYTTRYWATCCC Direction: Forward Position #: 16 Overlap #: 11 Alignment: AAYRAKCHBWYKTTMTMAYTKTWTTTRYWATCCC ---------------TTATTTCACTT-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 24 Combined Motif Original Motif Reverse Complement AAYRAKCHBWYKTTMTTATTTYAYTTRYWATCCC TTTCTTTGACTRG AAYRAKCHBWYKTTMTTWCTTTRAYTRBWATCCC Direction: Forward Position #: 16 Overlap #: 13 Alignment: AAYRAKCHBWYKTTMTTATTTYAYTTRYWATCCC ---------------TTTCTTTGACTRG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 66 Combined Motif Original Motif Reverse Complement AAYRAKCHBWYKTTMTTWCTTTRAYTRBWATCCC TGTGTGTGTGTKTGTGTGT AAYRAKCHBWYKTTMTKTBTKTGTBTRTDWKYSY Direction: Forward Position #: 16 Overlap #: 19 Alignment: AAYRAKCHBWYKTTMTTWCTTTRAYTRBWATCCC ---------------TGTGTGTGTGTKTGTGTGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 336 Combined Motif Original Motif Reverse Complement AAYRAKCHBWYKTTMTKTBTKTGTBTRTDWKYSY CAGGTGGTKTTTGGTTACAT AAYRAKCHBWYKTTMYWKGTGKKDTTTKGTTHCWT Direction: Forward Position #: 16 Overlap #: 19 Alignment: AAYRAKCHBWYKTTMTKTBTKTGTBTRTDWKYSY- ---------------CAGGTGGTKTTTGGTTACAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 145 Combined Motif Original Motif Reverse Complement AAYRAKCHBWYKTTMYWKGTGKKDTTTKGTTHCWT TYTGTCMTTTTGTGACTGGC AAYRAKCHBWYKTTMTHTGTBBTTTTKKGWYTSDY Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAYRAKCHBWYKTTMYWKGTGKKDTTTKGTTHCWT ---------------TYTGTCMTTTTGTGACTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 357 Combined Motif Reverse Complement Original Motif MHSAKWCRYAAAABBACAHARAAYMWVHGRTKKTT CAAGTTGACACATAAAATTA MHSAKWCRYAAAABBMMARWTRACAYVTRAWATTW Direction: Forward Position #: 16 Overlap #: 20 Alignment: MHSAKWCRYAAAABBACAHARAAYMWVHGRTKKTT ---------------CAAGTTGACACATAAAATTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 58 Combined Motif Reverse Complement Original Motif WAATWTKABKTGTKAWMTYRBBTTTTKKGWYTSDY ATGGACAYTTRGGTTGHTTC WAATWTKABKTGTKAATKBRCATTTWGKKTGWKTC Direction: Forward Position #: 16 Overlap #: 20 Alignment: WAATWTKABKTGTKAWMTYRBBTTTTKKGWYTSDY ---------------ATGGACAYTTRGGTTGHTTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 234 Combined Motif Original Motif Reverse Complement WAATWTKABKTGTKAATKBRCATTTWGKKTGWKTC GTGTCKGGAGTTTGTTCCTT WAATWTKABKTGTKARTGTMBDKWKTKKGTKCCTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: WAATWTKABKTGTKAATKBRCATTTWGKKTGWKTC ---------------GTGTCKGGAGTTTGTTCCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 148 Combined Motif Original Motif Reverse Complement WAATWTKABKTGTKARTGTMBDKWKTKKGTKCCTT CTTCGCTGACTCTCTTT WAATWTKABKTGTKACTKHSCTGASTBTSTTTCTT Direction: Forward Position #: 16 Overlap #: 17 Alignment: WAATWTKABKTGTKARTGTMBDKWKTKKGTKCCTT ---------------CTTCGCTGACTCTCTTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 195 Combined Motif Reverse Complement Original Motif AAGAAASABASTCAGSDRAGTRACAYVTRAWATTW TAAAAGACTACAWATTGGGT AAGAAASABASTCAGYRAAADAMYACAHAWWRKKT Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAGAAASABASTCAGSDRAGTRACAYVTRAWATTW ---------------TAAAAGACTACAWATTGGGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 308 Combined Motif Reverse Complement Reverse Complement ARYMWWTHTGTMRTHTTTKMCTGASTBTSTTTCTT GTTATTAATTGGCCTAATTT ARYMWWTHTGTMRTHKTTAWYWRWTKGYCTWWYTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: ARYMWWTHTGTMRTHTTTKMCTGASTBTSTTTCTT ---------------GTTATTAATTGGCCTAATTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 99 Combined Motif Reverse Complement Original Motif AAMWWAGKCYAWKWMWTAAYDAMYACAHAWWRKKT GCAAAKGACATGATYTCATT AAMWWAGKCYAWKWMRYAAMKRAYAYRAWYTBRTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAMWWAGKCYAWKWMWTAAYDAMYACAHAWWRKKT ---------------GCAAAKGACATGATYTCATT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 275 Combined Motif Reverse Complement Reverse Complement AAMBAMWTMMTKTMYYTTKMYWRWTKGYCTWWYTT TTTAACTCTGTGAG AAMBAMWTMMTKTMYTTTAACTCTKTGASTWWYTT Direction: Forward Position #: 16 Overlap #: 14 Alignment: AAMBAMWTMMTKTMYYTTKMYWRWTKGYCTWWYTT ---------------TTTAACTCTGTGAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 235 Combined Motif Reverse Complement Reverse Complement AAMWWASTCAYAGAGTTAAAKRAYAYRAWYTBRTT GCCAATTTCTCCCATTTGGA AAMWWASTCAYAGAGKYMAATKWCWCCMATTTGKW Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAMWWASTCAYAGAGTTAAAKRAYAYRAWYTBRTT ---------------GCCAATTTCTCCCATTTGGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 85 Combined Motif Reverse Complement Original Motif WYCAAATRGGWGWRATTYKYCTCTKTGASTWWYTT CTAGACATAAAGGTTCTCCA WYCAAATRGGWGWRAYTAGACWYWRWGRBTCTCYW Direction: Forward Position #: 16 Overlap #: 20 Alignment: WYCAAATRGGWGWRATTYKYCTCTKTGASTWWYTT ---------------CTAGACATAAAGGTTCTCCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 109 Combined Motif Original Motif Reverse Complement WYCAAATRGGWGWRAYTAGACWYWRWGRBTCTCYW TCTCTCTCTCTCTCTCTCTC WYCAAATRGGWGWRAYYHSWCWCTVTSTCTCTCTM Direction: Forward Position #: 16 Overlap #: 20 Alignment: WYCAAATRGGWGWRAYTAGACWYWRWGRBTCTCYW ---------------TCTCTCTCTCTCTCTCTCTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 129 Combined Motif Original Motif Reverse Complement WYCAAATRGGWGWRAYYHSWCWCTVTSTCTCTCTM TGAGKCAATTAAACCTCTT WYCAAATRGGWGWRATKAGKCWMTTWAACYYYYTM Direction: Forward Position #: 16 Overlap #: 19 Alignment: WYCAAATRGGWGWRAYYHSWCWCTVTSTCTCTCTM ---------------TGAGKCAATTAAACCTCTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 190 Combined Motif Reverse Complement Reverse Complement RAMKMKGTTWAAYWGRCTYATKWCWCCMATTTGKW ATCATTCTTATGCCTTTG RAMKMKGTTWAAYWGAYYHWTBTYAYGCMTTTGKW Direction: Forward Position #: 16 Overlap #: 18 Alignment: RAMKMKGTTWAAYWGRCTYATKWCWCCMATTTGKW ---------------ATCATTCTTATGCCTTTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 169 Combined Motif Original Motif Reverse Complement RAMKMKGTTWAAYWGAYYHWTBTYAYGCMTTTGKW TTTTATAGGATTTGGG RAMKMKGTTWAAYWGWTTTATAKKATKYGKKTGKW Direction: Forward Position #: 16 Overlap #: 16 Alignment: RAMKMKGTTWAAYWGAYYHWTBTYAYGCMTTTGKW ---------------TTTTATAGGATTTGGG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 330 Combined Motif Reverse Complement Reverse Complement WYCAYYCMRATYYTATAAAWCWMTTWAACYYYYTM ATAAAAACTTGCTGGTTTT WYCAYYCMRATYYTAWTAAAMACTTRCTSGTTTTM Direction: Forward Position #: 16 Overlap #: 19 Alignment: WYCAYYCMRATYYTATAAAWCWMTTWAACYYYYTM ---------------ATAAAAACTTGCTGGTTTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 29 Combined Motif Original Motif Reverse Complement WYCAYYCMRATYYTAWTAAAMACTTRCTSGTTTTM MGTCTMKCTCTGTKGCCCAG WYCAYYCMRATYYTAAKWMWMDCTYKSTKGYYYWV Direction: Forward Position #: 16 Overlap #: 20 Alignment: WYCAYYCMRATYYTAWTAAAMACTTRCTSGTTTTM ---------------MGTCTMKCTCTGTKGCCCAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 79 Combined Motif Original Motif Reverse Complement WYCAYYCMRATYYTAAKWMWMDCTYKSTKGYYYWV ATTCATTCATT WYCAYYCMRATYYTAATTCATTCWTTSTKGYYYWV Direction: Forward Position #: 16 Overlap #: 11 Alignment: WYCAYYCMRATYYTAAKWMWMDCTYKSTKGYYYWV ---------------ATTCATTCATT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 176 Combined Motif Original Motif Reverse Complement WYCAYYCMRATYYTAATTCATTCWTTSTKGYYYWV AACAACASACACTGGGGCCT WYCAYYCMRATYYTAAWYMACWCAYWCTGGBBYHT Direction: Forward Position #: 16 Overlap #: 20 Alignment: WYCAYYCMRATYYTAATTCATTCWTTSTKGYYYWV ---------------AACAACASACACTGGGGCCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 137 Combined Motif Reverse Complement Original Motif ADKBBCCAGWKTGWGTYKWTTAKKATKYGKKTGKW AGGTTTGTTACATAGGTAWA ADKBBCCAGWKTGWGWKGTTTRTTAYDTRGGTRKA Direction: Forward Position #: 16 Overlap #: 20 Alignment: ADKBBCCAGWKTGWGTYKWTTAKKATKYGKKTGKW ---------------AGGTTTGTTACATAGGTAWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 281 Combined Motif Original Motif Original Motif ADKBBCCAGWKTGWGWKGTTTRTTAYDTRGGTRKA AAATGGAATCAT ADKBBCCARARTGKAATSWTTRTTAYDTRGGTRKA Direction: Forward Position #: 9 Overlap #: 12 Alignment: ADKBBCCAGWKTGWGWKGTTTRTTAYDTRGGTRKA --------AAATGGAATCAT--------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 254 Combined Motif Reverse Complement Original Motif TRKACCKADKTAAMAAWSATTYCAKTKTGGBBYHT AAAATCACAAGCATTCCTAT TRKACCKADKTAAMAAAAATYACAAKYWKKBYYAT Direction: Forward Position #: 16 Overlap #: 20 Alignment: TRKACCKADKTAAMAAWSATTYCAKTKTGGBBYHT ---------------AAAATCACAAGCATTCCTAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 83 Combined Motif Original Motif Original Motif TRKACCKADKTAAMAAAAATYACAAKYWKKBYYAT AAAATGTGGTAYATAYAYAC TRKACCKADKTAAMAAAAATBTSRWRYATDYVYAY Direction: Forward Position #: 16 Overlap #: 20 Alignment: TRKACCKADKTAAMAAAAATYACAAKYWKKBYYAT ---------------AAAATGTGGTAYATAYAYAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 315 Combined Motif Reverse Complement Reverse Complement KTMBKDATMKWKSABATTTTTRTTAYDTRGGTRKA TGATATGGTTTGG KTMBKDATMKWKSABWKWTWTGKTWTGKRGGTRKA Direction: Forward Position #: 16 Overlap #: 13 Alignment: KTMBKDATMKWKSABATTTTTRTTAYDTRGGTRKA ---------------TGATATGGTTTGG------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 202 Combined Motif Original Motif Reverse Complement KTMBKDATMKWKSABWKWTWTGKTWTGKRGGTRKA GAAACTGCTTTGTGATGTGT KTMBKDATMKWKSABDRAWHTGSTTTGTGRKKWGW Direction: Forward Position #: 16 Overlap #: 20 Alignment: KTMBKDATMKWKSABWKWTWTGKTWTGKRGGTRKA ---------------GAAACTGCTTTGTGATGTGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 102 Combined Motif Reverse Complement Reverse Complement WCWRRKCACAAASCADWTKHBTSRWRYATDYVYAY GTTGTGAGGATTAAATGAG WCWRRKCACAAASCAGTTKTGAGGWTTAWATGHRY Direction: Forward Position #: 16 Overlap #: 19 Alignment: WCWRRKCACAAASCADWTKHBTSRWRYATDYVYAY ---------------GTTGTGAGGATTAAATGAG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 310 Combined Motif Reverse Complement Reverse Complement KKHCATWTAAWCCTCAYAACTGSTTTGTGRKKWGW GGATTTMKGACTTGCATGGG KKHCATWTAAWCCTCVBATTTVKKWYKTGMWTGGK Direction: Forward Position #: 16 Overlap #: 20 Alignment: KKHCATWTAAWCCTCAYAACTGSTTTGTGRKKWGW ---------------GGATTTMKGACTTGCATGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 349 Combined Motif Original Motif Original Motif KKHCATWTAAWCCTCVBATTTVKKWYKTGMWTGGK AGAGCCAAATCATGARTGAA KKHCATWTAAWCCTCAGAKYYADDTCATGARTGRA Direction: Forward Position #: 16 Overlap #: 20 Alignment: KKHCATWTAAWCCTCVBATTTVKKWYKTGMWTGGK ---------------AGAGCCAAATCATGARTGAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 217 Combined Motif Original Motif Reverse Complement KKHCATWTAAWCCTCAGAKYYADDTCATGARTGRA KGAGAACAGTAGGG KKHCATWTAAWCCTCRGAGMMMAGTMRKGARTGRA Direction: Forward Position #: 16 Overlap #: 14 Alignment: KKHCATWTAAWCCTCAGAKYYADDTCATGARTGRA ---------------KGAGAACAGTAGGG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 233 Combined Motif Reverse Complement Reverse Complement TKCAKTCYMYACTRYYCTCKGAGGWTTAWATGHRY AGGCTGTTTTACAGTTAAC TKCAKTCYMYACTRYASKCTGWKKTAYADWTAACY Direction: Forward Position #: 16 Overlap #: 19 Alignment: TKCAKTCYMYACTRYYCTCKGAGGWTTAWATGHRY ---------------AGGCTGTTTTACAGTTAAC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 213 Combined Motif Original Motif Reverse Complement TKCAKTCYMYACTRYASKCTGWKKTAYADWTAACY TGTATTAGTCMMTT TKCAKTCYMYACTRYTGTMTKAGTYMMWTWTAACY Direction: Forward Position #: 16 Overlap #: 14 Alignment: TKCAKTCYMYACTRYASKCTGWKKTAYADWTAACY ---------------TGTATTAGTCMMTT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 160 Combined Motif Original Motif Reverse Complement TKCAKTCYMYACTRYTGTMTKAGTYMMWTWTAACY TACCTGAGACTGGGTAATTT TKCAKTCYMYACTRYTRYCTKAGWCWVKKTWAWYT Direction: Forward Position #: 16 Overlap #: 20 Alignment: TKCAKTCYMYACTRYTGTMTKAGTYMMWTWTAACY ---------------TACCTGAGACTGGGTAATTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 214 Combined Motif Reverse Complement Reverse Complement AMWTWAYYVWGWCTYAGKKAMMAGTMRKGARTGRA GGTTTTCCATTCCTGAG AMWTWAYYVWGWCTYRGTTWTCMATTVBKRAKGRA Direction: Forward Position #: 16 Overlap #: 17 Alignment: AMWTWAYYVWGWCTYAGKKAMMAGTMRKGARTGRA ---------------GGTTTTCCATTCCTGAG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 346 Combined Motif Reverse Complement Original Motif TKCYTMRBVAATRGAWAACMKAGWCWVKKTWAWYT AAATCTTAAAGCTC TKCYTMRBVAATRGAAAAYCTWRAMKCTSTWAWYT Direction: Forward Position #: 16 Overlap #: 14 Alignment: TKCYTMRBVAATRGAWAACMKAGWCWVKKTWAWYT ---------------AAATCTTAAAGCTC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 211 Combined Motif Reverse Complement Reverse Complement AMWTWASAGYYTKWAGMTTTTCMATTVBKRAKGRA CGGCTTCATTCTTGAAGTC AMWTWASAGYYTKWAVVKYTTCADTYBTGAAGKCA Direction: Forward Position #: 16 Overlap #: 19 Alignment: AMWTWASAGYYTKWAGMTTTTCMATTVBKRAKGRA ---------------CGGCTTCATTCTTGAAGTC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 237 Combined Motif Reverse Complement Reverse Complement TGRCTTCAVKADTGAAKYVVTWRAMKCTSTWAWYT TTKCCTTGGCTA TGRCTTCAVKADTGAWTYCCTTGRCTMTSTWAWYT Direction: Forward Position #: 16 Overlap #: 12 Alignment: TGRCTTCAVKADTGAAKYVVTWRAMKCTSTWAWYT ---------------TTKCCTTGGCTA-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 21 Combined Motif Reverse Complement Original Motif AMWTWASAYAGMCAAGGMAWTCADTYBTGAAGKCA GCCGTTTKTTAAGCCCGTY AMWTWASAYAGMCAAGSCRTTYHTTMAKBMVGTCA Direction: Forward Position #: 16 Overlap #: 19 Alignment: AMWTWASAYAGMCAAGGMAWTCADTYBTGAAGKCA ---------------GCCGTTTKTTAAGCCCGTY- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 175 Combined Motif Reverse Complement Reverse Complement TGACBRBYTYAAHMAAMGSCTTGRCTMTSTWAWYT GCACTCTGTMTCTAGCT TGACBRBYTYAAHMARCACYYTGTMTMTAKCWWYT Direction: Forward Position #: 16 Overlap #: 17 Alignment: TGACBRBYTYAAHMAAMGSCTTGRCTMTSTWAWYT ---------------GCACTCTGTMTCTAGCT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 332 Combined Motif Reverse Complement Reverse Complement AMWWGYTARARACAKKGTGMTYHTTMAKBMVGTCA GTTTAACCATTGAGGGCCAG AMWWGYTARARACAKGKTKAWCMATTRRGGGSYAG Direction: Forward Position #: 16 Overlap #: 20 Alignment: AMWWGYTARARACAKKGTGMTYHTTMAKBMVGTCA ---------------GTTTAACCATTGAGGGCCAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 198 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 198 Motif 78 Reverse Complement Original Motif TCCCTRCCCT CGAGCCCTGCCCCGCGG CGAGYCCYKCCCCKCGG Direction: Forward Position #: 5 Overlap #: 10 Alignment: ----TCCCTRCCCT--- CGAGCCCTGCCCCGCGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 16 Original Motif Original Motif CGAGYCCYKCCCCKCGG GAAAGGGAACTCCCTGACCC GAAAGGGMRMKCCCTGACCCKCGG Direction: Forward Position #: 8 Overlap #: 13 Alignment: -------CGAGYCCYKCCCCKCGG GAAAGGGAACTCCCTGACCC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 136 Combined Motif Original Motif Reverse Complement GAAAGGGMRMKCCCTGACCCKCGG CCCCGGGCAGTGAGGG GAAAGGGMRMBCCCKGRCMSTSRGGG Direction: Forward Position #: 11 Overlap #: 14 Alignment: GAAAGGGMRMKCCCTGACCCKCGG-- ----------CCCCGGGCAGTGAGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 221 Combined Motif Reverse Complement Reverse Complement CCCKSASYGMCRGGGBYKYCCCTTTC GTGTCCCCTTCCTCCC CCCKSASYGMCGKGKCCYCYYCYTYCC Direction: Forward Position #: 12 Overlap #: 15 Alignment: CCCKSASYGMCRGGGBYKYCCCTTTC- -----------GTGTCCCCTTCCTCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 46 Combined Motif Reverse Complement Original Motif GGMAMGKKGKGGRCRCGRCMSTSRGGG CCCCWCCCCCA GGMAMGKKGKGSMCVHSCCCCWSRGGG Direction: Forward Position #: 12 Overlap #: 11 Alignment: GGMAMGKKGKGGRCRCGRCMSTSRGGG -----------CCCCWCCCCCA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 105 Combined Motif Reverse Complement Original Motif CCCKSWGGGGSHVGRSCYCYYCYTYCC GCCTCTCCCTCCACACCTCC CCCKSWGGGGSGCSKCYCCCTCCWCMCCTCC Direction: Forward Position #: 12 Overlap #: 16 Alignment: CCCKSWGGGGSHVGRSCYCYYCYTYCC---- -----------GCCTCTCCCTCCACACCTCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 13 Combined Motif Original Motif Reverse Complement CCCKSWGGGGSGCSKCYCCCTCCWCMCCTCC GGCAATGCCTCGCCCTGCTT CCCKSWGGGGSGCGGCHMYSYCYHSCCCTSCTT Direction: Forward Position #: 14 Overlap #: 18 Alignment: CCCKSWGGGGSGCSKCYCCCTCCWCMCCTCC-- -------------GGCAATGCCTCGCCCTGCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 247 Combined Motif Original Motif Original Motif CCCKSWGGGGSGCGGCHMYSYCYHSCCCTSCTT GCCTCACTGCCRC CCCKSWGGGGSGCGGCCTCACYKCCMCCTSCTT Direction: Forward Position #: 15 Overlap #: 13 Alignment: CCCKSWGGGGSGCGGCHMYSYCYHSCCCTSCTT --------------GCCTCACTGCCRC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 96 Combined Motif Reverse Complement Reverse Complement AAGSAGGYGGYMGTGAGGCCGCSCCCCWSRGGG GGAGCCGGCTCCCTCAGCTT AAGSAGGYGGYMGTGRRGCCGGCYCCCTCAGSKT Direction: Forward Position #: 15 Overlap #: 19 Alignment: AAGSAGGYGGYMGTGAGGCCGCSCCCCWSRGGG- --------------GGAGCCGGCTCCCTCAGCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 274 Combined Motif Original Motif Reverse Complement AAGSAGGYGGYMGTGRRGCCGGCYCCCTCAGSKT TTTCCTTGACCAG AAGSAGGYGGYMGTGTWKCCKKSWCCMKCAGSKT Direction: Forward Position #: 16 Overlap #: 13 Alignment: AAGSAGGYGGYMGTGRRGCCGGCYCCCTCAGSKT ---------------TTTCCTTGACCAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 155 Combined Motif Reverse Complement Reverse Complement AYSCTGYYGGWSRRGGYWACACYKCCMCCTSCTT GCCKCCCCGTCCGGGAGGGA AYSCTGYYGGWSRRGGCMDCCCCGYCCSSKASKKA Direction: Forward Position #: 16 Overlap #: 19 Alignment: AYSCTGYYGGWSRRGGYWACACYKCCMCCTSCTT- ---------------GCCKCCCCGTCCGGGAGGGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 30 Combined Motif Reverse Complement Reverse Complement TRRSTRSSGGMCGGGGHRGCCKKSWCCMKCAGSKT GCCGGGRAGAGGCGCTCCT TRRSTRSSGGMCGGGGCVGSSDWGASSCGCWSCTT Direction: Forward Position #: 16 Overlap #: 19 Alignment: TRRSTRSSGGMCGGGGHRGCCKKSWCCMKCAGSKT ---------------GCCGGGRAGAGGCGCTCCT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 212 Combined Motif Original Motif Reverse Complement TRRSTRSSGGMCGGGGCVGSSDWGASSCGCWSCTT MTTGACTACCCTA TRRSTRSSGGMCGGGVYBGVCTASMCBMGCWSCTT Direction: Forward Position #: 16 Overlap #: 13 Alignment: TRRSTRSSGGMCGGGGCVGSSDWGASSCGCWSCTT ---------------MTTGACTACCCTA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 286 Combined Motif Reverse Complement Reverse Complement AAGSWGCYVGYSTAGBCVMVCCCGYCCSSKASKKA CTCCCAGCCGCCTG AAGSWGCYVGYSTAGCYCCCASCSGCCTGKASKKA Direction: Forward Position #: 16 Overlap #: 14 Alignment: AAGSWGCYVGYSTAGBCVMVCCCGYCCSSKASKKA ---------------CTCCCAGCCGCCTG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 3 Combined Motif Original Motif Original Motif AAGSWGCYVGYSTAGCYCCCASCSGCCTGKASKKA GCTGGAGTGCAGTGGCRYGA AAGSWGCYVGYSTAGSCYSSAGYGCMSTGGHGBGA Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAGSWGCYVGYSTAGCYCCCASCSGCCTGKASKKA ---------------GCTGGAGTGCAGTGGCRYGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 60 Combined Motif Original Motif Original Motif AAGSWGCYVGYSTAGSCYSSAGYGCMSTGGHGBGA GATCACGAGGTCAGGAG AAGSWGCYVGYSTAGGMTCRMGWGGWCWGGAGBGA Direction: Forward Position #: 16 Overlap #: 17 Alignment: AAGSWGCYVGYSTAGSCYSSAGYGCMSTGGHGBGA ---------------GATCACGAGGTCAGGAG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 52 Combined Motif Original Motif Reverse Complement AAGSWGCYVGYSTAGGMTCRMGWGGWCWGGAGBGA GGTGGAGCTGCCTGCCAGTC AAGSWGCYVGYSTAGGVTSGAGCKGCCTGSMRGTM Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAGSWGCYVGYSTAGGMTCRMGWGGWCWGGAGBGA ---------------GGTGGAGCTGCCTGCCAGTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 331 Combined Motif Reverse Complement Original Motif RACKRSCAGGCRGCTCSAVCCTASMCBMGCWSCTT CCACCACAGCTCAAGGAGGC RACKRSCAGGCRGCTCCACCMYAGCYCARSGASKY Direction: Forward Position #: 16 Overlap #: 20 Alignment: RACKRSCAGGCRGCTCSAVCCTASMCBMGCWSCTT ---------------CCACCACAGCTCAAGGAGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 361 Combined Motif Original Motif Reverse Complement RACKRSCAGGCRGCTCCACCMYAGCYCARSGASKY GAACTCCTGACCT RACKRSCAGGCRGCTSMACYCCWGMCCWRSGASKY Direction: Forward Position #: 16 Overlap #: 13 Alignment: RACKRSCAGGCRGCTCCACCMYAGCYCARSGASKY ---------------GAACTCCTGACCT------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 10 Combined Motif Original Motif Reverse Complement RACKRSCAGGCRGCTSMACYCCWGMCCWRSGASKY MCCYGGCWSMGASGSTCCT RACKRSCAGGCRGCTVCMYKSCWSMSMBGSTCCKY Direction: Forward Position #: 16 Overlap #: 19 Alignment: RACKRSCAGGCRGCTSMACYCCWGMCCWRSGASKY ---------------MCCYGGCWSMGASGSTCCT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 259 Combined Motif Reverse Complement Reverse Complement MRGGASCBYSYSWGSYKYGVAGCKGCCTGSMRGTM TAATAAGGGTGTGGG MRGGASCBYSYSWGSTRAKAAGSGKSYKGGMRGTM Direction: Forward Position #: 16 Overlap #: 15 Alignment: MRGGASCBYSYSWGSYKYGVAGCKGCCTGSMRGTM ---------------TAATAAGGGTGTGGG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 64 Combined Motif Original Motif Original Motif MRGGASCBYSYSWGSTRAKAAGSGKSYKGGMRGTM GAAGGCAGCTAAGGCCCGGY MRGGASCBYSYSWGSKAAGRMRGSTAAGGSCVGKC Direction: Forward Position #: 16 Overlap #: 20 Alignment: MRGGASCBYSYSWGSTRAKAAGSGKSYKGGMRGTM ---------------GAAGGCAGCTAAGGCCCGGY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 15 Combined Motif Reverse Complement Original Motif GYCVGSCCTTASCKRMCTTYSCWSMSMBGSTCCKY CTTGCGCTTCCCRRGTGA GYCVGSCCTTASCKRCYTKCGCTKCCCRRGTSMKY Direction: Forward Position #: 16 Overlap #: 18 Alignment: GYCVGSCCTTASCKRMCTTYSCWSMSMBGSTCCKY ---------------CTTGCGCTTCCCRRGTGA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 237 Combined Motif Reverse Complement Original Motif MRYSACMMGGGRAGCGYAMGMRGSTAAGGSCVGKC TAGCCAAGGRAA MRYSACMMGGGRAGCKMRCSAAGGDAAGGSCVGKC Direction: Forward Position #: 16 Overlap #: 12 Alignment: MRYSACMMGGGRAGCGYAMGMRGSTAAGGSCVGKC ---------------TAGCCAAGGRAA-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 163 Combined Motif Reverse Complement Reverse Complement GYCVGSCCTTDCCTTSGMYRGCTKCCCRRGTSMKY GGAGCCCACGGAGG GYCVGSCCTTDCCTTGGAKMSCWCSSMGGGTSMKY Direction: Forward Position #: 16 Overlap #: 14 Alignment: GYCVGSCCTTDCCTTSGMYRGCTKCCCRRGTSMKY ---------------GGAGCCCACGGAGG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 144 Combined Motif Original Motif Original Motif GYCVGSCCTTDCCTTGGAKMSCWCSSMGGGTSMKY CCGCTGCACTGTGGGAGCCC GYCVGSCCTTDCCTTSSRCYGCACBGWGGGWGCYC Direction: Forward Position #: 16 Overlap #: 20 Alignment: GYCVGSCCTTDCCTTGGAKMSCWCSSMGGGTSMKY ---------------CCGCTGCACTGTGGGAGCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 39 Combined Motif Original Motif Original Motif GYCVGSCCTTDCCTTSSRCYGCACBGWGGGWGCYC AGGCGGCTGGGAGG GYCVGSCCTTDCCTTMGGCDGCWSGGAGGGWGCYC Direction: Forward Position #: 16 Overlap #: 14 Alignment: GYCVGSCCTTDCCTTSSRCYGCACBGWGGGWGCYC ---------------AGGCGGCTGGGAGG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 214 Combined Motif Reverse Complement Original Motif GKGCWCCCTCCSWGCHGCCYAAGGDAAGGSCVGKC CTCAGGAATGGAAAACC GKGCWCCCTCCSWGCCKCMGRARKGRARRMCCGKC Direction: Forward Position #: 16 Overlap #: 17 Alignment: GKGCWCCCTCCSWGCHGCCYAAGGDAAGGSCVGKC ---------------CTCAGGAATGGAAAACC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 127 Combined Motif Reverse Complement Reverse Complement GYCGGYKKTMCRKTMCYGRGGCWSGGAGGGWGCYC GGGGTTGGGG GYCGGYKKTMCRKTMSKGRKKSRGGGAGGGWGCYC Direction: Forward Position #: 16 Overlap #: 10 Alignment: GYCGGYKKTMCRKTMCYGRGGCWSGGAGGGWGCYC ---------------GGGGTTGGGG---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 309 Combined Motif Original Motif Original Motif GYCGGYKKTMCRKTMSKGRKKSRGGGAGGGWGCYC CATTCTGGGGTCTGGAGGAY GYCGGYKKTMCRKTMCDKKYTGGGGKMKGGAGSHY Direction: Forward Position #: 16 Overlap #: 20 Alignment: GYCGGYKKTMCRKTMSKGRKKSRGGGAGGGWGCYC ---------------CATTCTGGGGTCTGGAGGAY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 279 Combined Motif Reverse Complement Original Motif KHSCTCCRRRCCCCAKRRDGRARKGRARRMCCGKC GGGGGAGACATCACACR KHSCTCCRRRCCCCAGGGGGARACRKMAMACVGKC Direction: Forward Position #: 16 Overlap #: 17 Alignment: KHSCTCCRRRCCCCAKRRDGRARKGRARRMCCGKC ---------------GGGGGAGACATCACACR--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 2 Combined Motif Reverse Complement Original Motif GYCVGTRTRRKGTMTCCCCCTGGGGKMKGGAGSHY ATTAGCYRGGCRTGGTGGC GYCVGTRTRRKGTMTMYYMSYSGGGYVTGGWGGHY Direction: Forward Position #: 16 Overlap #: 19 Alignment: GYCVGTRTRRKGTMTCCCCCTGGGGKMKGGAGSHY ---------------ATTAGCYRGGCRTGGTGGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 191 Combined Motif Reverse Complement Reverse Complement KDCCWCCABMCCCSKSYKMRARACRKMAMACVGKC GCTGCARTCTCGGCACTTT KDCCWCCABMCCCSKGCTGCARWCWBVRCACTKTC Direction: Forward Position #: 16 Overlap #: 19 Alignment: KDCCWCCABMCCCSKSYKMRARACRKMAMACVGKC ---------------GCTGCARTCTCGGCACTTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 161 Combined Motif Reverse Complement Original Motif GARAGTGMVBWGWMTGCAGCYSGGGYVTGGWGGHY GAGGAGGRGGAGGDGGV GARAGTGMVBWGWMTGVRGMBSRGGHRKRGKGGHY Direction: Forward Position #: 16 Overlap #: 17 Alignment: GARAGTGMVBWGWMTGCAGCYSGGGYVTGGWGGHY ---------------GAGGAGGRGGAGGDGGV--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 164 Combined Motif Original Motif Reverse Complement GARAGTGMVBWGWMTGVRGMBSRGGHRKRGKGGHY GCGMGCGGGAACCGGGGCT GARAGTGMVBWGWMTGMGVGCGGGRACSGGGGSTY Direction: Forward Position #: 16 Overlap #: 19 Alignment: GARAGTGMVBWGWMTGVRGMBSRGGHRKRGKGGHY ---------------GCGMGCGGGAACCGGGGCT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 245 Combined Motif Reverse Complement Original Motif KASCCCCSGTKCCCGCVCRCARWCWBVRCACTKTC CAGACTGCCTCCTCAA KASCCCCSGTKCCCGCASACWGHCTCCKCAMTKTC Direction: Forward Position #: 16 Overlap #: 16 Alignment: KASCCCCSGTKCCCGCVCRCARWCWBVRCACTKTC ---------------CAGACTGCCTCCTCAA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 249 Combined Motif Original Motif Reverse Complement KASCCCCSGTKCCCGCASACWGHCTCCKCAMTKTC TTGGTGGTCTCTTCACA KASCCCCSGTKCCCGYWGGYGGTCTCYTCACAKTC Direction: Forward Position #: 16 Overlap #: 17 Alignment: KASCCCCSGTKCCCGCASACWGHCTCCKCAMTKTC ---------------TTGGTGGTCTCTTCACA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 98 Combined Motif Reverse Complement Reverse Complement GARTGTGAMGAGACCMCCWMCGGGRACSGGGGSTY CCCACGCCCACCCGGAACT GARTGTGAMGAGACCCCCAMSSSSAMCCGGRRCTY Direction: Forward Position #: 16 Overlap #: 19 Alignment: GARTGTGAMGAGACCMCCWMCGGGRACSGGGGSTY ---------------CCCACGCCCACCCGGAACT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 358 Combined Motif Reverse Complement Reverse Complement KAGKKCCGGRTSSSSRTGGGGGTCTCYTCACAKTC GGGGTGATGGACG KAGKKCCGGRTSSSSGKGGKGRTSKMCKCACAKTC Direction: Forward Position #: 16 Overlap #: 13 Alignment: KAGKKCCGGRTSSSSRTGGGGGTCTCYTCACAKTC ---------------GGGGTGATGGACG------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 298 Combined Motif Original Motif Original Motif KAGKKCCGGRTSSSSGKGGKGRTSKMCKCACAKTC ATAGAGGAGGACC KAGKKCCGGRTSSSSRTRGAGGWGGACBCACAKTC Direction: Forward Position #: 16 Overlap #: 13 Alignment: KAGKKCCGGRTSSSSGKGGKGRTSKMCKCACAKTC ---------------ATAGAGGAGGACC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 230 Combined Motif Original Motif Original Motif KAGKKCCGGRTSSSSRTRGAGGWGGACBCACAKTC AGAAAGGCATGTGAAAA KAGKKCCGGRTSSSSAKARAGGCRKRYGMAMAKTC Direction: Forward Position #: 16 Overlap #: 17 Alignment: KAGKKCCGGRTSSSSRTRGAGGWGGACBCACAKTC ---------------AGAAAGGCATGTGAAAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 95 Combined Motif Reverse Complement Reverse Complement GARTYTYCMMRKGCCTKTYTSSSSAMCCGGRRCTY CACCTCCCAGACMGGGT GARTYTYCMMRKGCCYDBCTCCCMRACMGGGDCTY Direction: Forward Position #: 16 Overlap #: 17 Alignment: GARTYTYCMMRKGCCTKTYTSSSSAMCCGGRRCTY ---------------CACCTCCCAGACMGGGT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 277 Combined Motif Original Motif Original Motif GARTYTYCMMRKGCCYDBCTCCCMRACMGGGDCTY GCCCTCACCAGAAGC GARTYTYCMMRKGCCGVCCTCMCCARMMGSGDCTY Direction: Forward Position #: 16 Overlap #: 15 Alignment: GARTYTYCMMRKGCCYDBCTCCCMRACMGGGDCTY ---------------GCCCTCACCAGAAGC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 183 Combined Motif Original Motif Original Motif GARTYTYCMMRKGCCGVCCTCMCCARMMGSGDCTY GCCRGCCCTGCYGGCC GARTYTYCMMRKGCCGCCVKCCCYRCHRGCSDCTY Direction: Forward Position #: 16 Overlap #: 16 Alignment: GARTYTYCMMRKGCCGVCCTCMCCARMMGSGDCTY ---------------GCCRGCCCTGCYGGCC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 65 Combined Motif Original Motif Reverse Complement GARTYTYCMMRKGCCGCCVKCCCYRCHRGCSDCTY CGGCGCTGMGCTCGATTTCT GARTYTYCMMRKGCCSSSCGCYSHGCTSGMBTYYT Direction: Forward Position #: 16 Overlap #: 20 Alignment: GARTYTYCMMRKGCCGCCVKCCCYRCHRGCSDCTY ---------------CGGCGCTGMGCTCGATTTCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 235 Combined Motif Original Motif Reverse Complement GARTYTYCMMRKGCCSSSCGCYSHGCTSGMBTYYT GCCAATTTCTCCCATTTGGA GARTYTYCMMRKGCCGCCMRYTKCKCYCRHTTKBW Direction: Forward Position #: 16 Overlap #: 20 Alignment: GARTYTYCMMRKGCCSSSCGCYSHGCTSGMBTYYT ---------------GCCAATTTCTCCCATTTGGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 103 Combined Motif Reverse Complement Reverse Complement WBYAAHKGKGRGRAMKYGGCGGCRKRYGMAMAKTC TTATTTCACTT WBYAAHKGKGRGRAMTTRKYKSAMTDYGMAMAKTC Direction: Forward Position #: 16 Overlap #: 11 Alignment: WBYAAHKGKGRGRAMKYGGCGGCRKRYGMAMAKTC ---------------TTATTTCACTT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 108 Combined Motif Reverse Complement Reverse Complement GARTYTYCMDARTSRMYKAAYTKCKCYCRHTTKBW GCGCTCKTCGGGGAGGCTCG GARTYTYCMDARTSRRCGMWCKTCKSSSAGKYTCD Direction: Forward Position #: 16 Overlap #: 20 Alignment: GARTYTYCMDARTSRMYKAAYTKCKCYCRHTTKBW ---------------GCGCTCKTCGGGGAGGCTCG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 89 Combined Motif Reverse Complement Reverse Complement HGAKYCTSSSYGARGWRCGMKSAMTDYGMAMAKTC TACACCCTCCGCAGCC HGAKYCTSSSYGARGTACACBCWCYKCRGMMAKTC Direction: Forward Position #: 16 Overlap #: 16 Alignment: HGAKYCTSSSYGARGWRCGMKSAMTDYGMAMAKTC ---------------TACACCCTCCGCAGCC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 50 Combined Motif Reverse Complement Reverse Complement GARTRRCKGYKGWGBGTGTACKTCKSSSAGKYTCD GCCCTCACATC GARTRRCKGYKGWGBGYSYWCAYMTCSSAGKYTCD Direction: Forward Position #: 16 Overlap #: 11 Alignment: GARTRRCKGYKGWGBGTGTACKTCKSSSAGKYTCD ---------------GCCCTCACATC--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 57 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 57 Motif 55 Reverse Complement Reverse Complement AATAAATATTT ATGGCTGAATAKTATTCCAT ATGRMTRAATAKTWTTCCAT Direction: Forward Position #: 4 Overlap #: 11 Alignment: ---AATAAATATTT------ ATGGCTGAATAKTATTCCAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 70 Combined Motif Reverse Complement Original Motif ATGGAAWARTATTKARMCAT CTATTGTGAATARTGCTGC ATGGAAWAVTATTGWGAMWWRTGCTGC Direction: Forward Position #: 9 Overlap #: 12 Alignment: ATGGAAWARTATTKARMCAT------- --------CTATTGTGAATARTGCTGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 137 Combined Motif Reverse Complement Reverse Complement GCAGCAMWWYTCWCAATAVTWTTCCAT TWTACCTATGTAACAAACCT GCAGCAMWWYTYWYAMYWATDTWMCAWACCT Direction: Forward Position #: 12 Overlap #: 16 Alignment: GCAGCAMWWYTCWCAATAVTWTTCCAT---- -----------TWTACCTATGTAACAAACCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 195 Combined Motif Original Motif Reverse Complement GCAGCAMWWYTYWYAMYWATDTWMCAWACCT ACCCAATWTGTAGTCTTTTA GCAGCAMWWYTYWWMCYWATDTDWMRTMYYTTA Direction: Forward Position #: 14 Overlap #: 18 Alignment: GCAGCAMWWYTYWYAMYWATDTWMCAWACCT-- -------------ACCCAATWTGTAGTCTTTTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 168 Combined Motif Original Motif Original Motif GCAGCAMWWYTYWWMCYWATDTDWMRTMYYTTA AGGTATTTCTCCCACC GCAGCAMWWYTYWWASSTATTTBTCVYACYTTA Direction: Forward Position #: 15 Overlap #: 16 Alignment: GCAGCAMWWYTYWWMCYWATDTDWMRTMYYTTA --------------AGGTATTTCTCCCACC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 7 Combined Motif Reverse Complement Reverse Complement TAAKGTMVGABAAATASSTWWMAMWWRTGCTGC TTTYTWTTTTTTYTWGAGAC TAAKGTMVGABAAATWYBTWTWWHTWDTDSWGMC Direction: Forward Position #: 15 Overlap #: 19 Alignment: TAAKGTMVGABAAATASSTWWMAMWWRTGCTGC- --------------TTTYTWTTTTTTYTWGAGAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 129 Combined Motif Reverse Complement Original Motif GYCWSHADWAHWWAWABMWATTTBTCVYACYTTA AAGAGGTTTAATTGRCTCA GYCWSHADWAHWWAWAARARKTTTWMYTRVCTYA Direction: Forward Position #: 16 Overlap #: 19 Alignment: GYCWSHADWAHWWAWABMWATTTBTCVYACYTTA ---------------AAGAGGTTTAATTGRCTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 349 Combined Motif Reverse Complement Reverse Complement TMAGBMAMYWAAARMTMTTWTWWHTWDTDSWGMC TTCAMTCATGATTTGGCTCT TMAGBMAMYWAAARMTYYWHTCWTKATTTGDSTCT Direction: Forward Position #: 16 Overlap #: 19 Alignment: TMAGBMAMYWAAARMTMTTWTWWHTWDTDSWGMC- ---------------TTCAMTCATGATTTGGCTCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 226 Combined Motif Original Motif Original Motif TMAGBMAMYWAAARMTYYWHTCWTKATTTGDSTCT AATAAACATGG TMAGBMAMYWAAARMWATAAWCATGRTTTGDSTCT Direction: Forward Position #: 16 Overlap #: 11 Alignment: TMAGBMAMYWAAARMTYYWHTCWTKATTTGDSTCT ---------------AATAAACATGG--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 224 Combined Motif Reverse Complement Reverse Complement AGASHCAAAMCATGWTTATWRKTTTWMYTRVCTYA CAAAGTCTTAACTCATT AGASHCAAAMCATGWYWAWKDBTTWACTYATYTYA Direction: Forward Position #: 16 Overlap #: 17 Alignment: AGASHCAAAMCATGWTTATWRKTTTWMYTRVCTYA ---------------CAAAGTCTTAACTCATT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 106 Combined Motif Original Motif Reverse Complement AGASHCAAAMCATGWYWAWKDBTTWACTYATYTYA GGGATTGTAAATACACCAAT AGASHCAAAMCATGWBRRATTGTWAAYWCACCWHW Direction: Forward Position #: 16 Overlap #: 20 Alignment: AGASHCAAAMCATGWYWAWKDBTTWACTYATYTYA ---------------GGGATTGTAAATACACCAAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 332 Combined Motif Reverse Complement Reverse Complement WHWGGTGWMTTWACAATMMBWCATGRTTTGDSTCT GTTTAACCATTGAGGGCCAG WHWGGTGWMTTWACARTHTAACMWKTKWKGGCCMK Direction: Forward Position #: 16 Overlap #: 20 Alignment: WHWGGTGWMTTWACAATMMBWCATGRTTTGDSTCT ---------------GTTTAACCATTGAGGGCCAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 83 Combined Motif Reverse Complement Original Motif RYGGCCYWYARWYGTTAHAMTGTWAAYWCACCWHW AAAATGTGGTAYATAYAYAC RYGGCCYWYARWYGTWAAAYKKKDWAYAYAYMHAH Direction: Forward Position #: 16 Overlap #: 20 Alignment: RYGGCCYWYARWYGTTAHAMTGTWAAYWCACCWHW ---------------AAAATGTGGTAYATAYAYAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 85 Combined Motif Reverse Complement Reverse Complement DTHYKTMTMTWHRRYMTTTWACMWKTKWKGGCCMK TGGAGAACCTTTATGTCTAG DTHYKTMTMTWHRRYTKKWKAMMMTTTATGKCTAG Direction: Forward Position #: 16 Overlap #: 20 Alignment: DTHYKTMTMTWHRRYMTTTWACMWKTKWKGGCCMK ---------------TGGAGAACCTTTATGTCTAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 79 Combined Motif Original Motif Reverse Complement DTHYKTMTMTWHRRYTKKWKAMMMTTTATGKCTAG ATTCATTCATT DTHYKTMTMTWHRRYATKMAWYCATTTATGKCTAG Direction: Forward Position #: 16 Overlap #: 11 Alignment: DTHYKTMTMTWHRRYTKKWKAMMMTTTATGKCTAG ---------------ATTCATTCATT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 102 Combined Motif Reverse Complement Original Motif CTAGRCATAAATGMWTRRATKKKDWAYAYAYMHAH CTCATTTAATCCTCACAAC CTAGRCATAAATGMWBTMATTTDATMYWYAYAHMH Direction: Forward Position #: 16 Overlap #: 19 Alignment: CTAGRCATAAATGMWTRRATKKKDWAYAYAYMHAH ---------------CTCATTTAATCCTCACAAC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 329 Combined Motif Original Motif Reverse Complement CTAGRCATAAATGMWBTMATTTDATMYWYAYAHMH GCTAATATATCCCTCCC CTAGRCATAAATGMWGYTAWTWTATCCYTMCMHMH Direction: Forward Position #: 16 Overlap #: 17 Alignment: CTAGRCATAAATGMWBTMATTTDATMYWYAYAHMH ---------------GCTAATATATCCCTCCC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 319 Combined Motif Reverse Complement Reverse Complement DYHRGRAKGGATAWAWTAKCWYCATTTATGKCTAG TTGTTAAAAACTA DYHRGRAKGGATAWATTGTTAAMAWYTATGKCTAG Direction: Forward Position #: 16 Overlap #: 13 Alignment: DYHRGRAKGGATAWAWTAKCWYCATTTATGKCTAG ---------------TTGTTAAAAACTA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 86 Combined Motif Reverse Complement Original Motif CTAGRCATAKWTYTTAACAATWTATCCYTMCMHMH AGTAGGTGCTCARTAAATRB CTAGRCATAKWTYTTARYARKWDMTCMVTMMMHVH Direction: Forward Position #: 16 Overlap #: 20 Alignment: CTAGRCATAKWTYTTAACAATWTATCCYTMCMHMH ---------------AGTAGGTGCTCARTAAATRB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 346 Combined Motif Reverse Complement Reverse Complement HBHYRYABYGARHWYKTMMTAAMAWYTATGKCTAG GAGCTTTAAGATTT HBHYRYABYGARHWYGWGCTWTAADMTWTGKCTAG Direction: Forward Position #: 16 Overlap #: 14 Alignment: HBHYRYABYGARHWYKTMMTAAMAWYTATGKCTAG ---------------GAGCTTTAAGATTT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 254 Combined Motif Original Motif Original Motif HBHYRYABYGARHWYGWGCTWTAADMTWTGKCTAG AAAATCACAAGCATTCCTAT HBHYRYABYGARHWYRAAMTYWMAARYATKYCTAK Direction: Forward Position #: 16 Overlap #: 20 Alignment: HBHYRYABYGARHWYGWGCTWTAADMTWTGKCTAG ---------------AAAATCACAAGCATTCCTAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 330 Combined Motif Original Motif Original Motif HBHYRYABYGARHWYRAAMTYWMAARYATKYCTAK AAAACCAGCAAGTTTTTAT HBHYRYABYGARHWYAAAAYCAGMAAGWTTTYWWK Direction: Forward Position #: 16 Overlap #: 19 Alignment: HBHYRYABYGARHWYRAAMTYWMAARYATKYCTAK ---------------AAAACCAGCAAGTTTTTAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 305 Combined Motif Original Motif Reverse Complement HBHYRYABYGARHWYAAAAYCAGMAAGWTTTYWWK GCTCTCAATTGGTCATT HBHYRYABYGARHWYRMWMTCARHWGGTYWTTWWK Direction: Forward Position #: 16 Overlap #: 17 Alignment: HBHYRYABYGARHWYAAAAYCAGMAAGWTTTYWWK ---------------GCTCTCAATTGGTCATT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 179 Combined Motif Original Motif Original Motif HBHYRYABYGARHWYRMWMTCARHWGGTYWTTWWK AGGTCCTTCAGGAGGTATTC HBHYRYABYGARHWYAVKYYCWWCAGGWBGTWTTY Direction: Forward Position #: 16 Overlap #: 20 Alignment: HBHYRYABYGARHWYRMWMTCARHWGGTYWTTWWK ---------------AGGTCCTTCAGGAGGTATTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 202 Combined Motif Original Motif Reverse Complement HBHYRYABYGARHWYAVKYYCWWCAGGWBGTWTTY GAAACTGCTTTGTGATGTGT HBHYRYABYGARHWYRAAACYDHTWKGTGATDTKT Direction: Forward Position #: 16 Overlap #: 20 Alignment: HBHYRYABYGARHWYAVKYYCWWCAGGWBGTWTTY ---------------GAAACTGCTTTGTGATGTGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 99 Combined Motif Original Motif Original Motif HBHYRYABYGARHWYRAAACYDHTWKGTGATDTKT GCAAAKGACATGATYTCATT HBHYRYABYGARHWYGMAAMBGAYAKGWKHTBWTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: HBHYRYABYGARHWYRAAACYDHTWKGTGATDTKT ---------------GCAAAKGACATGATYTCATT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 176 Combined Motif Original Motif Original Motif HBHYRYABYGARHWYGMAAMBGAYAKGWKHTBWTT AGGCCCCAGTGTSTGTTGTT HBHYRYABYGARHWYRSRMCCBASWGKDTVTTRTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: HBHYRYABYGARHWYGMAAMBGAYAKGWKHTBWTT ---------------AGGCCCCAGTGTSTGTTGTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 261 Combined Motif Reverse Complement Reverse Complement AAMAAVADRCWSTBGGRKSKKWDMTCMVTMMMHVH TAGTGGTGATTTSTGAGAT AAMAAVADRCWSTBGKAGYGGTGATYTVTRARATH Direction: Forward Position #: 16 Overlap #: 19 Alignment: AAMAAVADRCWSTBGGRKSKKWDMTCMVTMMMHVH ---------------TAGTGGTGATTTSTGAGAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 357 Combined Motif Original Motif Reverse Complement AAMAAVADRCWSTBGKAGYGGTGATYTVTRARATH TAATTTTATGTGTCAACTTG AAMAAVADRCWSTBGTARTKKTRWKTKTYAASWTB Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAMAAVADRCWSTBGKAGYGGTGATYTVTRARATH ---------------TAATTTTATGTGTCAACTTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 328 Combined Motif Original Motif Reverse Complement AAMAAVADRCWSTBGTARTKKTRWKTKTYAASWTB KACATTGATTTTGTATC AAMAAVADRCWSTBGTAMHTTKATTTTKTAWCWTB Direction: Forward Position #: 16 Overlap #: 17 Alignment: AAMAAVADRCWSTBGTARTKKTRWKTKTYAASWTB ---------------KACATTGATTTTGTATC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 275 Combined Motif Original Motif Original Motif AAMAAVADRCWSTBGTAMHTTKATTTTKTAWCWTB CTCACAGAGTTAAA AAMAAVADRCWSTBGYWCAYWGAKTTWAWAWCWTB Direction: Forward Position #: 16 Overlap #: 14 Alignment: AAMAAVADRCWSTBGTAMHTTKATTTTKTAWCWTB ---------------CTCACAGAGTTAAA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 259 Combined Motif Original Motif Original Motif AAMAAVADRCWSTBGYWCAYWGAKTTWAWAWCWTB CCCACACCCTTATTA AAMAAVADRCWSTBGCYCACASMSTTATTAWCWTB Direction: Forward Position #: 16 Overlap #: 15 Alignment: AAMAAVADRCWSTBGYWCAYWGAKTTWAWAWCWTB ---------------CCCACACCCTTATTA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 166 Combined Motif Reverse Complement Original Motif BAWGWTAATAASRSTGTGKGCBASWGKDTVTTRTT AAGGGACATTKGAG BAWGWTAATAASRSTRWGGGMCABTKGAKVTTRTT Direction: Forward Position #: 16 Overlap #: 14 Alignment: BAWGWTAATAASRSTGTGKGCBASWGKDTVTTRTT ---------------AAGGGACATTKGAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 194 Combined Motif Reverse Complement Reverse Complement AAMAAVYTCYAVTGYCCCWKASMSTTATTAWCWTB CAGCTACTCKTATACCCTTG AAMAAVYTCYAVTGYCMSHTACHCTTATWMCCTTG Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAMAAVYTCYAVTGYCCCWKASMSTTATTAWCWTB ---------------CAGCTACTCKTATACCCTTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 160 Combined Motif Reverse Complement Original Motif CAAGGYWATAAGHGTADSYGMCABTKGAKVTTRTT AAATTACCCAGTCTCAGGTA CAAGGYWATAAGHGTAAVTKACMYWGKMTVWKGTW Direction: Forward Position #: 16 Overlap #: 20 Alignment: CAAGGYWATAAGHGTADSYGMCABTKGAKVTTRTT ---------------AAATTACCCAGTCTCAGGTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 190 Combined Motif Original Motif Reverse Complement CAAGGYWATAAGHGTAAVTKACMYWGKMTVWKGTW ATCATTCTTATGCCTTTG CAAGGYWATAAGHGTAWCWTWCYTAKGCYTTTGTW Direction: Forward Position #: 16 Overlap #: 18 Alignment: CAAGGYWATAAGHGTAAVTKACMYWGKMTVWKGTW ---------------ATCATTCTTATGCCTTTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 119 Combined Motif Original Motif Reverse Complement CAAGGYWATAAGHGTAWCWTWCYTAKGCYTTTGTW KKCACCTTGATCTTGGACTT CAAGGYWATAAGHGTDKCAYHYTKATBYTKKWSTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: CAAGGYWATAAGHGTAWCWTWCYTAKGCYTTTGTW ---------------KKCACCTTGATCTTGGACTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 58 Combined Motif Reverse Complement Reverse Complement AASWYYAMBATYAMDKTGRDACHCTTATWMCCTTG GAAHCAACCKAAKTGTCCAT AASWYYAMBATYAMDGWRDCAMCCKWAKTVBCYWK Direction: Forward Position #: 16 Overlap #: 20 Alignment: AASWYYAMBATYAMDKTGRDACHCTTATWMCCTTG ---------------GAAHCAACCKAAKTGTCCAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 262 Combined Motif Reverse Complement Original Motif RWKGVVARTWRGGYTGDKWCHYTKATBYTKKWSTT CTCAGTGTTAATCTCCTGTC RWKGVVARTWRGGYTCTYASTBTTAWTCTCBTGTY Direction: Forward Position #: 16 Overlap #: 20 Alignment: RWKGVVARTWRGGYTGDKWCHYTKATBYTKKWSTT ---------------CTCAGTGTTAATCTCCTGTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 227 Combined Motif Original Motif Original Motif RWKGVVARTWRGGYTCTYASTBTTAWTCTCBTGTY CCCAAATCTCATSTTGAAT RWKGVVARTWRGGYTCYCAAWTYTMATCTYGWRTY Direction: Forward Position #: 16 Overlap #: 19 Alignment: RWKGVVARTWRGGYTCTYASTBTTAWTCTCBTGTY ---------------CCCAAATCTCATSTTGAAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 154 Combined Motif Original Motif Reverse Complement RWKGVVARTWRGGYTCYCAAWTYTMATCTYGWRTY TCCTATGAGAATCTAATG RWKGVVARTWRGGYTYCCWATKAKAATCTWRTGTY Direction: Forward Position #: 16 Overlap #: 18 Alignment: RWKGVVARTWRGGYTCYCAAWTYTMATCTYGWRTY ---------------TCCTATGAGAATCTAATG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 19 Combined Motif Original Motif Original Motif RWKGVVARTWRGGYTYCCWATKAKAATCTWRTGTY CACCAGGAGATTATATCCCR RWKGVVARTWRGGYTCMCYABGAGAWTMTAWYSYV Direction: Forward Position #: 16 Overlap #: 20 Alignment: RWKGVVARTWRGGYTYCCWATKAKAATCTWRTGTY ---------------CACCAGGAGATTATATCCCR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 225 Combined Motif Original Motif Reverse Complement RWKGVVARTWRGGYTCMCYABGAGAWTMTAWYSYV AAGTTCTKGGKTACATGTGC RWKGVVARTWRGGYTMASTWVKDGRDTAYATBYBC Direction: Forward Position #: 16 Overlap #: 20 Alignment: RWKGVVARTWRGGYTCMCYABGAGAWTMTAWYSYV ---------------AAGTTCTKGGKTACATGTGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 66 Combined Motif Original Motif Original Motif RWKGVVARTWRGGYTMASTWVKDGRDTAYATBYBC ACACACAYACACACACACA RWKGVVARTWRGGYTAMRYACDHRVAYAYAYRYDC Direction: Forward Position #: 16 Overlap #: 19 Alignment: RWKGVVARTWRGGYTMASTWVKDGRDTAYATBYBC ---------------ACACACAYACACACACACA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 54 Combined Motif Original Motif Original Motif RWKGVVARTWRGGYTAMRYACDHRVAYAYAYRYDC AAGGAAAAGAAA RWKGVVARTWRGGYTAARBAMAHGVAWAYAYRYDC Direction: Forward Position #: 16 Overlap #: 12 Alignment: RWKGVVARTWRGGYTAMRYACDHRVAYAYAYRYDC ---------------AAGGAAAAGAAA-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 356 Combined Motif Original Motif Original Motif RWKGVVARTWRGGYTAARBAMAHGVAWAYAYRYDC AATTAAAAGACACAGACTG RWKGVVARTWRGGYTAATTAAAAGAMAMMRAVTGC Direction: Forward Position #: 16 Overlap #: 19 Alignment: RWKGVVARTWRGGYTAARBAMAHGVAWAYAYRYDC ---------------AATTAAAAGACACAGACTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 308 Combined Motif Reverse Complement Original Motif GCAVTMYRTRTCTTTTAATTAMCCKWAKTVBCYWK AAATTAGGCCAATTAATAAC GCAVTMYRTRTCTTTWAATTARBCYAATTAAYAAB Direction: Forward Position #: 16 Overlap #: 20 Alignment: GCAVTMYRTRTCTTTTAATTAMCCKWAKTVBCYWK ---------------AAATTAGGCCAATTAATAAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 303 Combined Motif Reverse Complement Original Motif BTTMTTAATTKGBMTAATTWAAAGAMAMMRAVTGC AGTTCTTAAAGATGGT BTTMTTAATTKGBMTARTTYWWARAGAYVGTVTGC Direction: Forward Position #: 16 Overlap #: 16 Alignment: BTTMTTAATTKGBMTAATTWAAAGAMAMMRAVTGC ---------------AGTTCTTAAAGATGGT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 63 Combined Motif Original Motif Original Motif BTTMTTAATTKGBMTARTTYWWARAGAYVGTVTGC AGTGAGAACATRYRRTRTTT BTTMTTAATTKGBMTAGTKAKAAVATRYRGTVTKY Direction: Forward Position #: 16 Overlap #: 20 Alignment: BTTMTTAATTKGBMTARTTYWWARAGAYVGTVTGC ---------------AGTGAGAACATRYRRTRTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 213 Combined Motif Original Motif Original Motif BTTMTTAATTKGBMTAGTKAKAAVATRYRGTVTKY AAYRGACTAATACA BTTMTTAATTKGBMTARTDRAMWAATACAGTVTKY Direction: Forward Position #: 16 Overlap #: 14 Alignment: BTTMTTAATTKGBMTAGTKAKAAVATRYRGTVTKY ---------------AAYRGACTAATACA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 134 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 134 Motif 73 Original Motif Original Motif CAAACTGCA CAAACTGCAAG AGCAAACTGCA Direction: Backward Position #: 3 Overlap #: 9 Alignment: CAAACTGCA-- CAAACTGCAAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 304 Original Motif Reverse Complement AGCAAACTGCA AGCAGYTTGGAAACACT AGCARBYWRRMWRCACT Direction: Forward Position #: 5 Overlap #: 11 Alignment: ----AGCAAACTGCA-- AGCAGYTTGGAAACACT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 245 Combined Motif Original Motif Original Motif AGCARBYWRRMWRCACT CAGACTGCCTCCTCAA AGCARBCAGACTGCMYYCTCAA Direction: Forward Position #: 7 Overlap #: 11 Alignment: AGCARBYWRRMWRCACT----- ------CAGACTGCCTCCTCAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 71 Combined Motif Reverse Complement Reverse Complement TTGAGMKYGCAGTCTGBKTGCT CAAAGTGCT TTGAGMKYGCARWSTGCTTGCT Direction: Forward Position #: 10 Overlap #: 9 Alignment: TTGAGMKYGCAGTCTGBKTGCT ---------CAAAGTGCT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 123 Combined Motif Original Motif Original Motif TTGAGMKYGCARWSTGCTTGCT AGCAGTCTGAG TTGAGMKYGMRMAGTSYKWGCT Direction: Forward Position #: 10 Overlap #: 11 Alignment: TTGAGMKYGCARWSTGCTTGCT ---------AGCAGTCTGAG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 234 Combined Motif Original Motif Reverse Complement TTGAGMKYGMRMAGTSYKWGCT GTGTCKGGAGTTTGTTCCTT TTGAGMKYGVKGWSTGKRDKYTGTTCCTT Direction: Forward Position #: 10 Overlap #: 13 Alignment: TTGAGMKYGMRMAGTSYKWGCT------- ---------GTGTCKGGAGTTTGTTCCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 202 Combined Motif Original Motif Reverse Complement TTGAGMKYGVKGWSTGKRDKYTGTTCCTT GAAACTGCTTTGTGATGTGT TTGAGMKYGVKGKMWRSTGBTTKKTSMTKTGT Direction: Forward Position #: 13 Overlap #: 17 Alignment: TTGAGMKYGVKGWSTGKRDKYTGTTCCTT--- ------------GAAACTGCTTTGTGATGTGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 144 Combined Motif Reverse Complement Reverse Complement ACARARSARYAABCASKWYYCRVCMYYCTCAA GGGCTCCCACAGTGCAGCGG ACARARSARYAABCGGGHTCCVACABTSYMRMGG Direction: Forward Position #: 15 Overlap #: 18 Alignment: ACARARSARYAABCASKWYYCRVCMYYCTCAA-- --------------GGGCTCCCACAGTGCAGCGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 191 Combined Motif Reverse Complement Reverse Complement CCYMYKSABTGTVGGADCCCGBTTKKTSMTKTGT GCTGCARTCTCGGCACTTT CCYMYKSABTGTVGGRBTSCRVTYTBKGCWYTKT Direction: Forward Position #: 16 Overlap #: 19 Alignment: CCYMYKSABTGTVGGADCCCGBTTKKTSMTKTGT ---------------GCTGCARTCTCGGCACTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 297 Combined Motif Original Motif Reverse Complement CCYMYKSABTGTVGGRBTSCRVTYTBKGCWYTKT TGCTGATTGGT CCYMYKSABTGTVGGKGCKSATTSKTKGCWYTKT Direction: Forward Position #: 16 Overlap #: 11 Alignment: CCYMYKSABTGTVGGRBTSCRVTYTBKGCWYTKT ---------------TGCTGATTGGT-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 6 Combined Motif Reverse Complement Original Motif ARAKWGCRAYSAATSRGCRCCVACABTSYMRMGG GCTCACTGCAASCTC ARAKWGCRAYSAATSGSYVMCTRCADYCTCRMGG Direction: Forward Position #: 16 Overlap #: 15 Alignment: ARAKWGCRAYSAATSRGCRCCVACABTSYMRMGG ---------------GCTCACTGCAASCTC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 336 Combined Motif Reverse Complement Reverse Complement CCYMGAGMDTGMAGYVMSCSATTSKTKGCWYTKT CAGGTGGTKTTTGGTTACAT CCYMGAGMDTGMAGYCAGSKRKTKTTTGSTTWBWT Direction: Forward Position #: 16 Overlap #: 19 Alignment: CCYMGAGMDTGMAGYVMSCSATTSKTKGCWYTKT- ---------------CAGGTGGTKTTTGGTTACAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 121 Combined Motif Original Motif Reverse Complement CCYMGAGMDTGMAGYCAGSKRKTKTTTGSTTWBWT TGGAGGTTSTAG CCYMGAGMDTGMAGYYRGAGGTTSTWKGSTTWBWT Direction: Forward Position #: 16 Overlap #: 12 Alignment: CCYMGAGMDTGMAGYCAGSKRKTKTTTGSTTWBWT ---------------TGGAGGTTSTAG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 149 Combined Motif Original Motif Reverse Complement CCYMGAGMDTGMAGYYRGAGGTTSTWKGSTTWBWT GGGTGCAGGMGGGCTGAGT CCYMGAGMDTGMAGYGGGWGSWKGHDGGCTKAGTT Direction: Forward Position #: 16 Overlap #: 19 Alignment: CCYMGAGMDTGMAGYYRGAGGTTSTWKGSTTWBWT ---------------GGGTGCAGGMGGGCTGAGT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 321 Combined Motif Reverse Complement Original Motif AACTYAGCCHHCRWSCWCCCMCTRCADYCTCRMGG AAGCTCGAACTGGGTGGAGC AACTYAGCCHHCRWSMASCTCSAACWGGSTSGAGS Direction: Forward Position #: 16 Overlap #: 20 Alignment: AACTYAGCCHHCRWSCWCCCMCTRCADYCTCRMGG ---------------AAGCTCGAACTGGGTGGAGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 292 Combined Motif Reverse Complement Reverse Complement SCTCSASCCWGTTSGAGSTYSWKGHDGGCTKAGTT TTGTCCCACTGGAAGGTCTT SCTCSASCCWGTTSGWKGTCCMDSTGGRMKGWSTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: SCTCSASCCWGTTSGAGSTYSWKGHDGGCTKAGTT ---------------TTGTCCCACTGGAAGGTCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 195 Combined Motif Reverse Complement Original Motif AASWCRYKCCASDRGGACRWCSAACWGGSTSGAGS TAAAAGACTACAWATTGGGT AASWCRYKCCASDRGKAMAAVAMWMYRDRTDGRGK Direction: Forward Position #: 16 Overlap #: 20 Alignment: AASWCRYKCCASDRGGACRWCSAACWGGSTSGAGS ---------------TAAAAGACTACAWATTGGGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 177 Combined Motif Original Motif Original Motif AASWCRYKCCASDRGKAMAAVAMWMYRDRTDGRGK CCCGAAGCTGCRYRCTCGGT AASWCRYKCCASDRGYMMRAAGCTVCRBRYTBRGT Direction: Forward Position #: 16 Overlap #: 20 Alignment: AASWCRYKCCASDRGKAMAAVAMWMYRDRTDGRGK ---------------CCCGAAGCTGCRYRCTCGGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 178 Combined Motif Reverse Complement Reverse Complement ACMBAKMBKGVAGCTTMRRKCMDSTGGRMKGWSTT ATGTGGAGGTGGAAGACAGT ACMBAKMBKGVAGCTWHGTGSAGGTGGAAGRYMKT Direction: Forward Position #: 16 Overlap #: 20 Alignment: ACMBAKMBKGVAGCTTMRRKCMDSTGGRMKGWSTT ---------------ATGTGGAGGTGGAAGACAGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 299 Combined Motif Reverse Complement Reverse Complement AYYKKCTTCCACCTSCACHWAGCTVCRBRYTBRGT TTGGAGGTTCTAGCAGGG AYYKKCTTCCACCTSYTSVARGYTCYAGCMKGGGT Direction: Forward Position #: 16 Overlap #: 18 Alignment: AYYKKCTTCCACCTSCACHWAGCTVCRBRYTBRGT ---------------TTGGAGGTTCTAGCAGGG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 235 Combined Motif Reverse Complement Original Motif ACCCYYGCTMGAMCMTVSAMSAGGTGGAAGRYMKT TCCAAATGGGAGAAATTGGC ACCCYYGCTMGAMCMTCCAARWGGKRGAARDTGGY Direction: Forward Position #: 16 Overlap #: 20 Alignment: ACCCYYGCTMGAMCMTVSAMSAGGTGGAAGRYMKT ---------------TCCAAATGGGAGAAATTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 171 Combined Motif Original Motif Original Motif ACCCYYGCTMGAMCMTCCAARWGGKRGAARDTGGY AAAAGTCCACAGTCCAAAGT ACCCYYGCTMGAMCMWMMARWYSRBAGWMMAWAGT Direction: Forward Position #: 16 Overlap #: 20 Alignment: ACCCYYGCTMGAMCMTCCAARWGGKRGAARDTGGY ---------------AAAAGTCCACAGTCCAAAGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 47 Combined Motif Original Motif Reverse Complement ACCCYYGCTMGAMCMWMMARWYSRBAGWMMAWAGT MGGAAACTGAGGC ACCCYYGCTMGAMCMAVRAAACBGARGHMMAWAGT Direction: Forward Position #: 16 Overlap #: 13 Alignment: ACCCYYGCTMGAMCMWMMARWYSRBAGWMMAWAGT ---------------MGGAAACTGAGGC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 3 Combined Motif Original Motif Reverse Complement ACCCYYGCTMGAMCMAVRAAACBGARGHMMAWAGT TCKMGCCACTGCACTCCAGC ACCCYYGCTMGAMCMTVGARMCASTGSACTMMAGY Direction: Forward Position #: 16 Overlap #: 20 Alignment: ACCCYYGCTMGAMCMAVRAAACBGARGHMMAWAGT ---------------TCKMGCCACTGCACTCCAGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 315 Combined Motif Original Motif Original Motif ACCCYYGCTMGAMCMTVGARMCASTGSACTMMAGY CCAAACCATATCA ACCCYYGCTMGAMCMYCAAACCATAKCACTMMAGY Direction: Forward Position #: 16 Overlap #: 13 Alignment: ACCCYYGCTMGAMCMTVGARMCASTGSACTMMAGY ---------------CCAAACCATATCA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 309 Combined Motif Original Motif Reverse Complement ACCCYYGCTMGAMCMYCAAACCATAKCACTMMAGY MTCCTCCAGACCCCAGAATG ACCCYYGCTMGAMCMMYMMWCCAGABCMCAGAAKB Direction: Forward Position #: 16 Overlap #: 20 Alignment: ACCCYYGCTMGAMCMYCAAACCATAKCACTMMAGY ---------------MTCCTCCAGACCCCAGAATG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 99 Combined Motif Reverse Complement Reverse Complement BRTTCTGRGBTCTGGWRRMRRGYTCYAGCMKGGGT AATGAKATCATGTCYTTTGC BRTTCTGRGBTCTGGAADVAGRTYVTRTCHTKKGY Direction: Forward Position #: 16 Overlap #: 20 Alignment: BRTTCTGRGBTCTGGWRRMRRGYTCYAGCMKGGGT ---------------AATGAKATCATGTCYTTTGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 227 Combined Motif Original Motif Reverse Complement BRTTCTGRGBTCTGGAADVAGRTYVTRTCHTKKGY ATTCAASATGAGATTTGGG BRTTCTGRGBTCTGGAWTCAAVWTGWGWYTTGGGY Direction: Forward Position #: 16 Overlap #: 19 Alignment: BRTTCTGRGBTCTGGAADVAGRTYVTRTCHTKKGY ---------------ATTCAASATGAGATTTGGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 18 Combined Motif Original Motif Original Motif BRTTCTGRGBTCTGGAWTCAAVWTGWGWYTTGGGY GAAAAGCGCAGTATTMGGG BRTTCTGRGBTCTGGRAWAAGCDYRRKATTHGGGY Direction: Forward Position #: 16 Overlap #: 19 Alignment: BRTTCTGRGBTCTGGAWTCAAVWTGWGWYTTGGGY ---------------GAAAAGCGCAGTATTMGGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 172 Combined Motif Original Motif Original Motif BRTTCTGRGBTCTGGRAWAAGCDYRRKATTHGGGY AGAAACAGAA BRTTCTGRGBTCTGGARAAASMGMARKATTHGGGY Direction: Forward Position #: 16 Overlap #: 10 Alignment: BRTTCTGRGBTCTGGRAWAAGCDYRRKATTHGGGY ---------------AGAAACAGAA---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 68 Combined Motif Reverse Complement Reverse Complement KCCCHAATRMTYCYSTTTMTCCAGABCMCAGAAKB GACCTGCAGCCCGCCATG KCCCHAATRMTYCYSKWYCTSCAGMCCVCMAWRKB Direction: Forward Position #: 16 Overlap #: 18 Alignment: KCCCHAATRMTYCYSTTTMTCCAGABCMCAGAAKB ---------------GACCTGCAGCCCGCCATG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 232 Combined Motif Reverse Complement Reverse Complement BRMWTRGVGGRCTGSAGKWYSMGMARKATTHGGGY AAGTCTCCCAATTACAACT BRMWTRGVGGRCTGSARGTCTCSCAATWWYARSKY Direction: Forward Position #: 16 Overlap #: 19 Alignment: BRMWTRGVGGRCTGSAGKWYSMGMARKATTHGGGY ---------------AAGTCTCCCAATTACAACT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 136 Combined Motif Reverse Complement Original Motif KRSKTKWWATTGSGAGACKTSCAGMCCVCMAWRKB CCCTCACTGCCCGGGG KRSKTKWWATTGSGASMCTYRCWGCCCGSSRWRKB Direction: Forward Position #: 16 Overlap #: 16 Alignment: KRSKTKWWATTGSGAGACKTSCAGMCCVCMAWRKB ---------------CCCTCACTGCCCGGGG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 233 Combined Motif Reverse Complement Original Motif BRMWMSSCGGGCWGKKAGRSTCSCAATWWYARSKY GTTAACTGTAAAACAGCCT BRMWMSSCGGGCWGKGWKAVYYGYAAWAHMRVCTY Direction: Forward Position #: 16 Overlap #: 19 Alignment: BRMWMSSCGGGCWGKKAGRSTCSCAATWWYARSKY ---------------GTTAACTGTAAAACAGCCT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 328 Combined Motif Original Motif Original Motif BRMWMSSCGGGCWGKGWKAVYYGYAAWAHMRVCTY GATACAAAATCAATGTR BRMWMSSCGGGCWGKGATAVMARAWMAAYVTVCTY Direction: Forward Position #: 16 Overlap #: 17 Alignment: BRMWMSSCGGGCWGKGWKAVYYGYAAWAHMRVCTY ---------------GATACAAAATCAATGTR--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 330 Combined Motif Original Motif Original Motif BRMWMSSCGGGCWGKGATAVMARAWMAAYVTVCTY AAAACCAGCAAGTTTTTAT BRMWMSSCGGGCWGKRAWACCAGCAARWTTTTMTY Direction: Forward Position #: 16 Overlap #: 19 Alignment: BRMWMSSCGGGCWGKGATAVMARAWMAAYVTVCTY ---------------AAAACCAGCAAGTTTTTAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 317 Combined Motif Reverse Complement Reverse Complement KAYAAAAWMTTGCTGGTWTKRCWGCCCGSSRWRKB ATGTTGTAGCATGT KAYAAAAWMTTGCTGRTKTTGYAGCMYGBSRWRKB Direction: Forward Position #: 16 Overlap #: 14 Alignment: KAYAAAAWMTTGCTGGTWTKRCWGCCCGSSRWRKB ---------------ATGTTGTAGCATGT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 189 Combined Motif Original Motif Reverse Complement KAYAAAAWMTTGCTGRTKTTGYAGCMYGBSRWRKB CAATGATAGACTGGAT KAYAAAAWMTTGCTGMWATKRTAGMCTGGAKWRKB Direction: Forward Position #: 16 Overlap #: 16 Alignment: KAYAAAAWMTTGCTGRTKTTGYAGCMYGBSRWRKB ---------------CAATGATAGACTGGAT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 306 Combined Motif Reverse Complement Original Motif BRMWRTCCAGYCTAKYATWRCAGCAARWTTTTMTY GACATGAGCTGGCGCTTG BRMWRTCCAGYCTAKSACATSAGCWRGYDYTTGTY Direction: Forward Position #: 16 Overlap #: 18 Alignment: BRMWRTCCAGYCTAKYATWRCAGCAARWTTTTMTY ---------------GACATGAGCTGGCGCTTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 242 Combined Motif Original Motif Original Motif BRMWRTCCAGYCTAKSACATSAGCWRGYDYTTGTY AACCCTATTGTGAACTGYG BRMWRTCCAGYCTAKVACMYKAKYKKGAACTKBKY Direction: Forward Position #: 16 Overlap #: 19 Alignment: BRMWRTCCAGYCTAKSACATSAGCWRGYDYTTGTY ---------------AACCCTATTGTGAACTGYG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 104 Combined Motif Original Motif Original Motif BRMWRTCCAGYCTAKVACMYKAKYKKGAACTKBKY CAACATGGATGRARCTGGAG BRMWRTCCAGYCTAKVAMCHTRGWTGGARCTGGAV Direction: Forward Position #: 16 Overlap #: 20 Alignment: BRMWRTCCAGYCTAKVACMYKAKYKKGAACTKBKY ---------------CAACATGGATGRARCTGGAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 271 Combined Motif Original Motif Reverse Complement BRMWRTCCAGYCTAKVAMCHTRGWTGGARCTGGAV KGCAACCTAGATCCCT BRMWRTCCAGYCTAKBRCMMYVKAKRKMCCTGGAV Direction: Forward Position #: 16 Overlap #: 16 Alignment: BRMWRTCCAGYCTAKVAMCHTRGWTGGARCTGGAV ---------------KGCAACCTAGATCCCT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 45 Combined Motif Original Motif Original Motif BRMWRTCCAGYCTAKBRCMMYVKAKRKMCCTGGAV TGCCCAGTCTGGAAAGTG BRMWRTCCAGYCTAKTGCCCMGTMTGGAAMKKGAV Direction: Forward Position #: 16 Overlap #: 18 Alignment: BRMWRTCCAGYCTAKBRCMMYVKAKRKMCCTGGAV ---------------TGCCCAGTCTGGAAAGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 162 Combined Motif Reverse Complement Original Motif VTCRYYTTCCARACYGGGCARTAGMCTGGAKWRKB ATGGACCTTG VTCRYYTTCCARACYRKGSAMYWKVCTGGAKWRKB Direction: Forward Position #: 16 Overlap #: 10 Alignment: VTCRYYTTCCARACYGGGCARTAGMCTGGAKWRKB ---------------ATGGACCTTG---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 247 Combined Motif Reverse Complement Reverse Complement BRMWRTCCAGVRWKRTSCRKMGTMTGGAAMKKGAV GKGGCAGTGAGGC BRMWRTCCAGVRWKRKBSGYAGTSWGGMAMKKGAV Direction: Forward Position #: 16 Overlap #: 13 Alignment: BRMWRTCCAGVRWKRTSCRKMGTMTGGAAMKKGAV ---------------GKGGCAGTGAGGC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 322 Combined Motif Reverse Complement Original Motif VTCRYYTRCCWSACTKCSBYMYWKVCTGGAKWRKB AGGGCCTTTGCASWTGC VTCRYYTRCCWSACTDSGGYCTTTGCWSDDGYRKB Direction: Forward Position #: 16 Overlap #: 17 Alignment: VTCRYYTRCCWSACTKCSBYMYWKVCTGGAKWRKB ---------------AGGGCCTTTGCASWTGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 220 Combined Motif Reverse Complement Reverse Complement BRMMCDHSWGCAAAGKCCSDAGTSWGGMAMKKGAV GTGGGTGCAGTGCA BRMMCDHSWGCAAAGGYSGKWGYAGKGCAMKKGAV Direction: Forward Position #: 16 Overlap #: 14 Alignment: BRMMCDHSWGCAAAGKCCSDAGTSWGGMAMKKGAV ---------------GTGGGTGCAGTGCA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 301 Combined Motif Original Motif Original Motif BRMMCDHSWGCAAAGGYSGKWGYAGKGCAMKKGAV CCAAGACYCCAGAC BRMMCDHSWGCAAAGSCRRGASYMSAGMMMKKGAV Direction: Forward Position #: 16 Overlap #: 14 Alignment: BRMMCDHSWGCAAAGGYSGKWGYAGKGCAMKKGAV ---------------CCAAGACYCCAGAC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 333 Combined Motif Reverse Complement Original Motif VTCRYYRYCTSRMSTCKKGSCTTTGCWSDDGYRKB TAGATAATAGCTCCAGCTTT VTCRYYRYCTSRMSTYWGRTMWTWGCTCCAGCDTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: VTCRYYRYCTSRMSTCKKGSCTTTGCWSDDGYRKB ---------------TAGATAATAGCTCCAGCTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 206 Combined Motif Original Motif Reverse Complement VTCRYYRYCTSRMSTYWGRTMWTWGCTCCAGCDTT GGRCKCACWGGAGC VTCRYYRYCTSRMSTKDGVKCAYWGSWSCAGCDTT Direction: Forward Position #: 16 Overlap #: 14 Alignment: VTCRYYRYCTSRMSTYWGRTMWTWGCTCCAGCDTT ---------------GGRCKCACWGGAGC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 172 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 172 Motif 356 Reverse Complement Reverse Complement TTCTGTTTCT CAGTCTGTGTCTTTTAATT TTTAATTKTCTGTKTCTCA Direction: Backward Position #: 8 Overlap #: 10 Alignment: --TTCTGTTTCT------- CAGTCTGTGTCTTTTAATT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 145 Reverse Complement Reverse Complement TGAGAYACAGARAATTAAA TYTGTCMTTTTGTGACTGGC TYTGTCMTTKWGWBACWGRMAATTAAA Direction: Forward Position #: 9 Overlap #: 12 Alignment: --------TGAGAYACAGARAATTAAA TYTGTCMTTTTGTGACTGGC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 175 Combined Motif Original Motif Reverse Complement TYTGTCMTTKWGWBACWGRMAATTAAA GCACTCTGTMTCTAGCT TYTGTCMTTKWGCAMYYKGHAWYTARMT Direction: Forward Position #: 12 Overlap #: 16 Alignment: TYTGTCMTTKWGWBACWGRMAATTAAA- -----------GCACTCTGTMTCTAGCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 54 Combined Motif Original Motif Reverse Complement TYTGTCMTTKWGCAMYYKGHAWYTARMT TTTCTTTTCCTT TYTGTCMTTKWGTTHCYTKTMHTTARMT Direction: Forward Position #: 13 Overlap #: 12 Alignment: TYTGTCMTTKWGCAMYYKGHAWYTARMT ------------TTTCTTTTCCTT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 7 Combined Motif Reverse Complement Original Motif ARMTAAHYARAMGHAACWYAARGACAMA GTCTCWAMAAAAAAWAMAAA ARMTAAHYARAMGTMWCWMAAARAMAAAMAAA Direction: Forward Position #: 13 Overlap #: 16 Alignment: ARMTAAHYARAMGHAACWYAARGACAMA---- ------------GTCTCWAMAAAAAAWAMAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 214 Combined Motif Original Motif Original Motif ARMTAAHYARAMGTMWCWMAAARAMAAAMAAA CTCAGGAATGGAAAACC ARMTAAHYARAMGTCTCARRAAWRVAAAAMMA Direction: Forward Position #: 15 Overlap #: 17 Alignment: ARMTAAHYARAMGTMWCWMAAARAMAAAMAAA --------------CTCAGGAATGGAAAACC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 109 Combined Motif Original Motif Original Motif ARMTAAHYARAMGTCTCARRAAWRVAAAAMMA GAGAGAGAGAGAGAGAGAGA ARMTAAHYARAMGTSWSAGRRAGAGARARAVAGA Direction: Forward Position #: 15 Overlap #: 18 Alignment: ARMTAAHYARAMGTCTCARRAAWRVAAAAMMA-- --------------GAGAGAGAGAGAGAGAGAGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 234 Combined Motif Reverse Complement Reverse Complement TCTVTKTKTCTCTKKCTSWSACYTKTMHTTARMT GTGTCKGGAGTTTGTTCCTT TCTVTKTKTCTCTKKSTGTCDBKWGTHTKTWVCTT Direction: Forward Position #: 16 Overlap #: 19 Alignment: TCTVTKTKTCTCTKKCTSWSACYTKTMHTTARMT- ---------------GTGTCKGGAGTTTGTTCCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 65 Combined Motif Original Motif Reverse Complement TCTVTKTKTCTCTKKSTGTCDBKWGTHTKTWVCTT CGGCGCTGMGCTCGATTTCT TCTVTKTKTCTCTKKCKGYSCTGMGYTYGWTTYYT Direction: Forward Position #: 16 Overlap #: 20 Alignment: TCTVTKTKTCTCTKKSTGTCDBKWGTHTKTWVCTT ---------------CGGCGCTGMGCTCGATTTCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 24 Combined Motif Reverse Complement Original Motif AKMAAWCKAKCYCAGSMCRGRRAGAGARARAVAGA CKAGTCAAAGAAA AKMAAWCKAKCYCAGCHMGTMAAAGRAAARAVAGA Direction: Forward Position #: 16 Overlap #: 13 Alignment: AKMAAWCKAKCYCAGSMCRGRRAGAGARARAVAGA ---------------CKAGTCAAAGAAA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 67 Combined Motif Original Motif Reverse Complement AKMAAWCKAKCYCAGCHMGTMAAAGRAAARAVAGA CACCAGACTCAGGAGCCCAG AKMAAWCKAKCYCAGCACSWGAMWSARRAGMCMRR Direction: Forward Position #: 16 Overlap #: 20 Alignment: AKMAAWCKAKCYCAGCHMGTMAAAGRAAARAVAGA ---------------CACCAGACTCAGGAGCCCAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 47 Combined Motif Reverse Complement Original Motif MKRGRCTMMTSWRTCWSGTGCTGMGYTYGWTTYYT GCCTCAGTTTCCY MKRGRCTMMTSWRTCKCSTSMKKTKCYYGWTTYYT Direction: Forward Position #: 16 Overlap #: 13 Alignment: MKRGRCTMMTSWRTCWSGTGCTGMGYTYGWTTYYT ---------------GCCTCAGTTTCCY------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 266 Combined Motif Original Motif Reverse Complement MKRGRCTMMTSWRTCKCSTSMKKTKCYYGWTTYYT TGCTGCTGCTGC MKRGRCTMMTSWRTCKSCTGCKGCTSCYGWTTYYT Direction: Forward Position #: 16 Overlap #: 12 Alignment: MKRGRCTMMTSWRTCKCSTSMKKTKCYYGWTTYYT ---------------TGCTGCTGCTGC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 254 Combined Motif Reverse Complement Original Motif AKMAAWCKGSAGCRGCAGSRGAMWSARRAGMCMRR AAAATCACAAGCATTCCTAT AKMAAWCKGSAGCRGMARMWCACWARVAWKCCYAD Direction: Forward Position #: 16 Overlap #: 20 Alignment: AKMAAWCKGSAGCRGCAGSRGAMWSARRAGMCMRR ---------------AAAATCACAAGCATTCCTAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 62 Combined Motif Reverse Complement Reverse Complement DTMGGRWTVMTWGTGWYKTYCKGCTSCYGWTTYYT GTAGACKGGAGCTGTTCCT DTMGGRWTVMTWGTGGTWKACKGSWGCTGTTCCTT Direction: Forward Position #: 16 Overlap #: 19 Alignment: DTMGGRWTVMTWGTGWYKTYCKGCTSCYGWTTYYT ---------------GTAGACKGGAGCTGTTCCT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 357 Combined Motif Original Motif Reverse Complement DTMGGRWTVMTWGTGGTWKACKGSWGCTGTTCCTT TAATTTTATGTGTCAACTTG DTMGGRWTVMTWGTGKWATWYTRBDKSTSWWCYTK Direction: Forward Position #: 16 Overlap #: 20 Alignment: DTMGGRWTVMTWGTGGTWKACKGSWGCTGTTCCTT ---------------TAATTTTATGTGTCAACTTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 330 Combined Motif Original Motif Reverse Complement DTMGGRWTVMTWGTGKWATWYTRBDKSTSWWCYTK ATAAAAACTTGCTGGTTTT DTMGGRWTVMTWGTGATAWAAWCTTGCTGRTYTTK Direction: Forward Position #: 16 Overlap #: 19 Alignment: DTMGGRWTVMTWGTGKWATWYTRBDKSTSWWCYTK ---------------ATAAAAACTTGCTGGTTTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 29 Combined Motif Reverse Complement Reverse Complement RAAMAMCAGCAAGWTTWTATCACWARVAWKCCYAD MGTCTMKCTCTGTKGCCCAG RAAMAMCAGCAAGWTWKTMTCRCTMKGWDKCCCAG Direction: Forward Position #: 16 Overlap #: 20 Alignment: RAAMAMCAGCAAGWTTWTATCACWARVAWKCCYAD ---------------MGTCTMKCTCTGTKGCCCAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 363 Combined Motif Reverse Complement Reverse Complement CTGGGYDWCRRAGKGARAYWAWCTTGCTGRTYTTK WACAATCAGACCTTG CTGGGYDWCRRAGKGAAMMATHMKWSCTKGTYTTK Direction: Forward Position #: 16 Overlap #: 15 Alignment: CTGGGYDWCRRAGKGARAYWAWCTTGCTGRTYTTK ---------------WACAATCAGACCTTG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 63 Combined Motif Original Motif Reverse Complement CTGGGYDWCRRAGKGAAMMATHMKWSCTKGTYTTK AAAMAMMKMATGTTCTCACT CTGGGYDWCRRAGKGAAAMAHMVVATSTTSTCWYT Direction: Forward Position #: 16 Overlap #: 20 Alignment: CTGGGYDWCRRAGKGAAMMATHMKWSCTKGTYTTK ---------------AAAMAMMKMATGTTCTCACT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 66 Combined Motif Reverse Complement Original Motif AKWGASAASATVVRDTYTTTCRCTMKGWDKCCCAG ACACACAYACACACACACA AKWGASAASATVVRDWYWYWCACWCASAHRCMCAG Direction: Forward Position #: 16 Overlap #: 19 Alignment: AKWGASAASATVVRDTYTTTCRCTMKGWDKCCCAG ---------------ACACACAYACACACACACA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 58 Combined Motif Original Motif Reverse Complement AKWGASAASATVVRDWYWYWCACWCASAHRCMCAG GAAHCAACCKAAKTGTCCAT AKWGASAASATVVRDDMAYMMACMBAVDTGYCCAK Direction: Forward Position #: 16 Overlap #: 20 Alignment: AKWGASAASATVVRDWYWYWCACWCASAHRCMCAG ---------------GAAHCAACCKAAKTGTCCAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 117 Combined Motif Reverse Complement Reverse Complement RTGGMCADBTVRGTYRMTYHHMVVATSTTSTCWYT TTYTTGTTGTTGTTGTT RTGGMCADBTVRGTYKTTTTVYTGWTGTTGTYWYT Direction: Forward Position #: 16 Overlap #: 17 Alignment: RTGGMCADBTVRGTYRMTYHHMVVATSTTSTCWYT ---------------TTYTTGTTGTTGTTGTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 41 Combined Motif Reverse Complement Original Motif AKWMACAACAWCAMVAAAARMACMBAVDTGYCCAK AAAYAAAAAAA AKWMACAACAWCAMVAAAHAAAMMHAVDTGYCCAK Direction: Forward Position #: 16 Overlap #: 11 Alignment: AKWMACAACAWCAMVAAAARMACMBAVDTGYCCAK ---------------AAAYAAAAAAA--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 148 Combined Motif Original Motif Original Motif AKWMACAACAWCAMVAAAHAAAMMHAVDTGYCCAK AAAGAGAGTCAGCGAAG AKWMACAACAWCAMVAAAGARAVTCAGBDAASCAK Direction: Forward Position #: 16 Overlap #: 17 Alignment: AKWMACAACAWCAMVAAAHAAAMMHAVDTGYCCAK ---------------AAAGAGAGTCAGCGAAG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 49 Combined Motif Original Motif Reverse Complement AKWMACAACAWCAMVAAAGARAVTCAGBDAASCAK GGRRMCAGATGT AKWMACAACAWCAMVRRARACAGAYRDBDAASCAK Direction: Forward Position #: 16 Overlap #: 12 Alignment: AKWMACAACAWCAMVAAAGARAVTCAGBDAASCAK ---------------GGRRMCAGATGT-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 235 Combined Motif Reverse Complement Original Motif RTGSTTHBDMMTCTGTMTKKVYTGWTGTTGTYWYT TCCAAATGGGAGAAATTGGC RTGSTTHBDMMTCTGTCYWAATKGKWGWWRTTRBY Direction: Forward Position #: 16 Overlap #: 20 Alignment: RTGSTTHBDMMTCTGTMTKKVYTGWTGTTGTYWYT ---------------TCCAAATGGGAGAAATTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 91 Combined Motif Original Motif Reverse Complement RTGSTTHBDMMTCTGTCYWAATKGKWGWWRTTRBY TTGAGACMGKGTCT RTGSTTHBDMMTCTGTYGAGAYVGKDKHTRTTRBY Direction: Forward Position #: 16 Overlap #: 14 Alignment: RTGSTTHBDMMTCTGTCYWAATKGKWGWWRTTRBY ---------------TTGAGACMGKGTCT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 193 Combined Motif Original Motif Original Motif RTGSTTHBDMMTCTGTYGAGAYVGKDKHTRTTRBY ATACAATGGGGGTACAGRC RTGSTTHBDMMTCTGWTVMAATGGGGKHWCWKRBY Direction: Forward Position #: 16 Overlap #: 19 Alignment: RTGSTTHBDMMTCTGTYGAGAYVGKDKHTRTTRBY ---------------ATACAATGGGGGTACAGRC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 115 Combined Motif Reverse Complement Reverse Complement KBKYWGWHYCCCCATTRBAWCAGAYRDBDAASCAK HAGTGGKATTGCTGGATCAT KBKYWGWHYCCCCATTAKWDSRRWTGCTGRAKCAT Direction: Forward Position #: 16 Overlap #: 20 Alignment: KBKYWGWHYCCCCATTRBAWCAGAYRDBDAASCAK ---------------HAGTGGKATTGCTGGATCAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 85 Combined Motif Original Motif Reverse Complement KBKYWGWHYCCCCATTAKWDSRRWTGCTGRAKCAT TGGAGAACCTTTATGTCTAG KBKYWGWHYCCCCATTRGAGAAMYTKTWKGWCYAK Direction: Forward Position #: 16 Overlap #: 20 Alignment: KBKYWGWHYCCCCATTAKWDSRRWTGCTGRAKCAT ---------------TGGAGAACCTTTATGTCTAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 253 Combined Motif Reverse Complement Reverse Complement YTMGWCRWARAKYTTCTCMAATGGGGKHWCWKRBY ACAGAGTGAGACTCT YTMGWCRWARAKYTTMYMSARTGRGRSTMYWKRBY Direction: Forward Position #: 16 Overlap #: 15 Alignment: YTMGWCRWARAKYTTCTCMAATGGGGKHWCWKRBY ---------------ACAGAGTGAGACTCT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 187 Combined Motif Reverse Complement Original Motif KBKYWMRASKCKCAMTSYKYAAMYTKTWKGWCYAK TCTCTGAGCCTCAGTT KBKYWMRASKCKCAMTCTCTGAGCYTCAKKTCYAK Direction: Forward Position #: 16 Overlap #: 16 Alignment: KBKYWMRASKCKCAMTSYKYAAMYTKTWKGWCYAK ---------------TCTCTGAGCCTCAGTT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 328 Combined Motif Original Motif Reverse Complement KBKYWMRASKCKCAMTCTCTGAGCYTCAKKTCYAK KACATTGATTTTGTATC KBKYWMRASKCKCAMTMYMTKRAYTTYDTATCYAK Direction: Forward Position #: 16 Overlap #: 17 Alignment: KBKYWMRASKCKCAMTCTCTGAGCYTCAKKTCYAK ---------------KACATTGATTTTGTATC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 299 Combined Motif Reverse Complement Original Motif YTMGATAHMAAMTMRAYKYARTGRGRSTMYWKRBY CCCTGCTAGAACCTCCAA YTMGATAHMAAMTMRMCBTRVTRGRACYYCHDABY Direction: Forward Position #: 16 Overlap #: 18 Alignment: YTMGATAHMAAMTMRAYKYARTGRGRSTMYWKRBY ---------------CCCTGCTAGAACCTCCAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 190 Combined Motif Reverse Complement Original Motif KBTDDGMKGTKCKAVMABGRKRAYTTYDTATCYAK CAAAGGCATAAGAATGAT KBTDDGMKGTKCKAVCAARGGSATWWKAWTKMTAK Direction: Forward Position #: 16 Overlap #: 18 Alignment: KBTDDGMKGTKCKAVMABGRKRAYTTYDTATCYAK ---------------CAAAGGCATAAGAATGAT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 221 Combined Motif Original Motif Original Motif KBTDDGMKGTKCKAVCAARGGSATWWKAWTKMTAK GGGAGGAAGGGGACAC KBTDDGMKGTKCKAVSRGAGGAAKDGGAMWBMTAK Direction: Forward Position #: 16 Overlap #: 16 Alignment: KBTDDGMKGTKCKAVCAARGGSATWWKAWTKMTAK ---------------GGGAGGAAGGGGACAC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 313 Combined Motif Reverse Complement Original Motif YTAYBWRTCCHYTTCCTCMSVTRGRACYYCHDABY CTCCTGCCTCAGCY YTAYBWRTCCHYTTCCTCCBGYCKMASCYCHDABY Direction: Forward Position #: 16 Overlap #: 14 Alignment: YTAYBWRTCCHYTTCCTCMSVTRGRACYYCHDABY ---------------CTCCTGCCTCAGCY------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 176 Combined Motif Original Motif Reverse Complement YTAYBWRTCCHYTTCCTCCBGYCKMASCYCHDABY AACAACASACACTGGGGCCT YTAYBWRTCCHYTTCMWCMWSMCACACYKSBGHCT Direction: Forward Position #: 16 Overlap #: 20 Alignment: YTAYBWRTCCHYTTCCTCCBGYCKMASCYCHDABY ---------------AACAACASACACTGGGGCCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 291 Combined Motif Reverse Complement Original Motif AGHCBSYMGTGTGYSWYGWYGAAKDGGAMWBMTAK CTGAGGACCTGAGGTCRTA AGHCBSYMGTGTGYSCTGAKGAMCTGRRGTCRTAK Direction: Forward Position #: 16 Overlap #: 19 Alignment: AGHCBSYMGTGTGYSWYGWYGAAKDGGAMWBMTAK ---------------CTGAGGACCTGAGGTCRTA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 325 Combined Motif Reverse Complement Original Motif YTAKGACMKCAGRTCYTCAGSMCACACYKSBGHCT AGCAGCTGTAAATA YTAKGACMKCAGRTCAKCAGCTGTMAMTASBGHCT Direction: Forward Position #: 16 Overlap #: 14 Alignment: YTAKGACMKCAGRTCYTCAGSMCACACYKSBGHCT ---------------AGCAGCTGTAAATA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 135 Combined Motif Reverse Complement Reverse Complement AGHCBSTAYTYACAGCTGYTGAMCTGRRGTCRTAK CTGGGCAACAAGAG AGHCBSTAYTYACAGCTGBGSAACARGAGTCRTAK Direction: Forward Position #: 16 Overlap #: 14 Alignment: AGHCBSTAYTYACAGCTGYTGAMCTGRRGTCRTAK ---------------CTGGGCAACAAGAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 336 Combined Motif Original Motif Reverse Complement AGHCBSTAYTYACAGCTGBGSAACARGAGTCRTAK CAGGTGGTKTTTGGTTACAT AGHCBSTAYTYACAGCWGGTGRWBTWKRGTYAYAT Direction: Forward Position #: 16 Overlap #: 20 Alignment: AGHCBSTAYTYACAGCTGBGSAACARGAGTCRTAK ---------------CAGGTGGTKTTTGGTTACAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 327 Combined Motif Original Motif Original Motif AGHCBSTAYTYACAGCWGGTGRWBTWKRGTYAYAT AGGAGGAAGTCAATTTC AGHCBSTAYTYACAGMDGRKGAAGTYAAKTTMYAT Direction: Forward Position #: 16 Overlap #: 17 Alignment: AGHCBSTAYTYACAGCWGGTGRWBTWKRGTYAYAT ---------------AGGAGGAAGTCAATTTC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 184 Combined Motif Original Motif Original Motif AGHCBSTAYTYACAGMDGRKGAAGTYAAKTTMYAT ATATTGATGATCCTGACC AGHCBSTAYTYACAGATRDKGAWGWTHMTKWCCAT Direction: Forward Position #: 16 Overlap #: 18 Alignment: AGHCBSTAYTYACAGMDGRKGAAGTYAAKTTMYAT ---------------ATATTGATGATCCTGACC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 154 Combined Motif Original Motif Original Motif AGHCBSTAYTYACAGATRDKGAWGWTHMTKWCCAT CATTAGATTCTCATAGGA AGHCBSTAYTYACAGMWWTWGATKMTCATRDSMAT Direction: Forward Position #: 16 Overlap #: 18 Alignment: AGHCBSTAYTYACAGATRDKGAWGWTHMTKWCCAT ---------------CATTAGATTCTCATAGGA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 243 Combined Motif Original Motif Original Motif AGHCBSTAYTYACAGMWWTWGATKMTCATRDSMAT CAGTGGTTCTCAA AGHCBSTAYTYACAGCAGTGGWTYTYMATRDSMAT Direction: Forward Position #: 16 Overlap #: 13 Alignment: AGHCBSTAYTYACAGMWWTWGATKMTCATRDSMAT ---------------CAGTGGTTCTCAA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 204 Combined Motif Reverse Complement Reverse Complement ATYSHKATYKAKAWCCACTGCTGTMAMTASBGHCT GGAGTCTMKCTCT ATYSHKATYKAKAWCSRMKKCTSKCWCTASBGHCT Direction: Forward Position #: 16 Overlap #: 13 Alignment: ATYSHKATYKAKAWCCACTGCTGTMAMTASBGHCT ---------------GGAGTCTMKCTCT------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 233 Combined Motif Reverse Complement Reverse Complement AGHCBSTAGWGRSAGRYYMSGWTYTYMATRDSMAT AGGCTGTTTTACAGTTAAC AGHCBSTAGWGRSAGABBCYGTTTTMMAKTTAAMT Direction: Forward Position #: 16 Overlap #: 19 Alignment: AGHCBSTAGWGRSAGRYYMSGWTYTYMATRDSMAT ---------------AGGCTGTTTTACAGTTAAC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 189 Combined Motif Original Motif Original Motif AGHCBSTAGWGRSAGABBCYGTTTTMMAKTTAAMT ATCCAGTCTATCATTG AGHCBSTAGWGRSAGATCCAGTYTWTCATTKAAMT Direction: Forward Position #: 16 Overlap #: 16 Alignment: AGHCBSTAGWGRSAGABBCYGTTTTMMAKTTAAMT ---------------ATCCAGTCTATCATTG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 218 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 218 Motif 327 Reverse Complement Reverse Complement AAGTWACTT GAAATTGACTTCCTCCT CCTCCTAAKTDACTTGA Direction: Backward Position #: 7 Overlap #: 9 Alignment: --AAGTWACTT------ GAAATTGACTTCCTCCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 231 Reverse Complement Reverse Complement TCAAGTHARTTAGGAGG MGAAGGGACTTGCCTTGT MGAAGGGWCWWGYCWWKTAGGAGG Direction: Forward Position #: 8 Overlap #: 11 Alignment: -------TCAAGTHARTTAGGAGG MGAAGGGACTTGCCTTGT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 316 Combined Motif Original Motif Original Motif MGAAGGGWCWWGYCWWKTAGGAGG CGGAAGTGACGT MGAAGGGWCWCGBMAGTKASGWGG Direction: Forward Position #: 11 Overlap #: 12 Alignment: MGAAGGGWCWWGYCWWKTAGGAGG ----------CGGAAGTGACGT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 213 Combined Motif Original Motif Reverse Complement MGAAGGGWCWCGBMAGTKASGWGG TGTATTAGTCMMTT MGAAGGGWCWTGTAWTWGWCVMKK Direction: Forward Position #: 11 Overlap #: 14 Alignment: MGAAGGGWCWCGBMAGTKASGWGG ----------TGTATTAGTCMMTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 166 Combined Motif Original Motif Reverse Complement MGAAGGGWCWTGTAWTWGWCVMKK CTCRAATGTCCCTT MGAAGGGWCWYKYRAWTGTCCCTT Direction: Forward Position #: 11 Overlap #: 14 Alignment: MGAAGGGWCWTGTAWTWGWCVMKK ----------CTCRAATGTCCCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 103 Combined Motif Reverse Complement Reverse Complement AAGGGACAWTKKYKWGWCCCTTCY TTATTTCACTT AAGGGACAWTTTMKTKHMCYTTCY Direction: Forward Position #: 11 Overlap #: 11 Alignment: AAGGGACAWTKKYKWGWCCCTTCY ----------TTATTTCACTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 194 Combined Motif Reverse Complement Original Motif MGAAKGYDRARYAAAWTGTCCCTT CAAGGGTATAYGAGTAGCTG MGAAKGYDRAVAARRGTRTMCVWKTAGCTG Direction: Forward Position #: 11 Overlap #: 14 Alignment: MGAAKGYDRARYAAAWTGTCCCTT------ ----------CAAGGGTATAYGAGTAGCTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 234 Combined Motif Original Motif Reverse Complement MGAAKGYDRAVAARRGTRTMCVWKTAGCTG GTGTCKGGAGTTTGTTCCTT MGAAKGYDRAVAAGKGTVTVGAGTTWGYTSCTT Direction: Forward Position #: 14 Overlap #: 17 Alignment: MGAAKGYDRAVAARRGTRTMCVWKTAGCTG--- -------------GTGTCKGGAGTTTGTTCCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 85 Combined Motif Original Motif Reverse Complement MGAAKGYDRAVAAGKGTVTVGAGTTWGYTSCTT TGGAGAACCTTTATGTCTAG MGAAKGYDRAVAAGTGKAKAVMVTTTRTKBCTWG Direction: Forward Position #: 15 Overlap #: 19 Alignment: MGAAKGYDRAVAAGKGTVTVGAGTTWGYTSCTT- --------------TGGAGAACCTTTATGTCTAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 254 Combined Motif Original Motif Reverse Complement MGAAKGYDRAVAAGTGKAKAVMVTTTRTKBCTWG ATAGGAATGCTTGTGATTTT MGAAKGYDRAVAAGTRTAKRAATKYTDBTGMTTKT Direction: Forward Position #: 16 Overlap #: 19 Alignment: MGAAKGYDRAVAAGTGKAKAVMVTTTRTKBCTWG- ---------------ATAGGAATGCTTGTGATTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 160 Combined Motif Original Motif Reverse Complement MGAAKGYDRAVAAGTRTAKRAATKYTDBTGMTTKT TACCTGAGACTGGGTAATTT MGAAKGYDRAVAAGTDWMSDRAKDCTGGKKAWTTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: MGAAKGYDRAVAAGTRTAKRAATKYTDBTGMTTKT ---------------TACCTGAGACTGGGTAATTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 137 Combined Motif Reverse Complement Original Motif AAAWTRYCCAGDYTMDSRWDACTTVTKHMCYTTCY AGGTTTGTTACATAGGTAWA AAAWTRYCCAGDYTMAGGTTWSTTAYDTASBTWYW Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAAWTRYCCAGDYTMDSRWDACTTVTKHMCYTTCY ---------------AGGTTTGTTACATAGGTAWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 195 Combined Motif Reverse Complement Reverse Complement WKWABSTADMTAASWAACCTRAKDCTGGKKAWTTT ACCCAATWTGTAGTCTTTTA WKWABSTADMTAASWAMCCWAWBTSTRGTBWTTTW Direction: Forward Position #: 16 Overlap #: 20 Alignment: WKWABSTADMTAASWAACCTRAKDCTGGKKAWTTT ---------------ACCCAATWTGTAGTCTTTTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 330 Combined Motif Original Motif Reverse Complement WKWABSTADMTAASWAMCCWAWBTSTRGTBWTTTW ATAAAAACTTGCTGGTTTT WKWABSTADMTAASWATMMAAACTTKMKKGTTTTW Direction: Forward Position #: 16 Overlap #: 19 Alignment: WKWABSTADMTAASWAMCCWAWBTSTRGTBWTTTW ---------------ATAAAAACTTGCTGGTTTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 58 Combined Motif Original Motif Original Motif WKWABSTADMTAASWATMMAAACTTKMKKGTTTTW ATGGACAYTTRGGTTGHTTC WKWABSTADMTAASWATRRAMAYTTDVGKKKTTTH Direction: Forward Position #: 16 Overlap #: 20 Alignment: WKWABSTADMTAASWATMMAAACTTKMKKGTTTTW ---------------ATGGACAYTTRGGTTGHTTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 76 Combined Motif Original Motif Reverse Complement WKWABSTADMTAASWATRRAMAYTTDVGKKKTTTH CMTAGYACAGTGCCTGGCAC WKWABSTADMTAASWMHDARCACWKDGBYTGKYWC Direction: Forward Position #: 16 Overlap #: 20 Alignment: WKWABSTADMTAASWATRRAMAYTTDVGKKKTTTH ---------------CMTAGYACAGTGCCTGGCAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 129 Combined Motif Reverse Complement Original Motif GWMYCAKBCDRWGTGMTDHYWSTTAYDTASBTWYW AAGAGGTTTAATTGRCTCA GWMYCAKBCDRWGTGAWGABDBTTAWTTRVCTHAW Direction: Forward Position #: 16 Overlap #: 19 Alignment: GWMYCAKBCDRWGTGMTDHYWSTTAYDTASBTWYW ---------------AAGAGGTTTAATTGRCTCA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 336 Combined Motif Original Motif Reverse Complement GWMYCAKBCDRWGTGAWGABDBTTAWTTRVCTHAW CAGGTGGTKTTTGGTTACAT GWMYCAKBCDRWGTGMAGRTGGTTWTTKGTYWCAT Direction: Forward Position #: 16 Overlap #: 20 Alignment: GWMYCAKBCDRWGTGAWGABDBTTAWTTRVCTHAW ---------------CAGGTGGTKTTTGGTTACAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 202 Combined Motif Original Motif Reverse Complement GWMYCAKBCDRWGTGMAGRTGGTTWTTKGTYWCAT GAAACTGCTTTGTGATGTGT GWMYCAKBCDRWGTGSARAYKGYTTTKTGATDYRT Direction: Forward Position #: 16 Overlap #: 20 Alignment: GWMYCAKBCDRWGTGMAGRTGGTTWTTKGTYWCAT ---------------GAAACTGCTTTGTGATGTGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 261 Combined Motif Reverse Complement Reverse Complement AMMHATCAYAAAMCRKTKTSCACWKDGBYTGKYWC TAGTGGTGATTTSTGAGAT AMMHATCAYAAAMCRTWGTGBWSATTKSTKRGATC Direction: Forward Position #: 16 Overlap #: 19 Alignment: AMMHATCAYAAAMCRKTKTSCACWKDGBYTGKYWC ---------------TAGTGGTGATTTSTGAGAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 47 Combined Motif Reverse Complement Original Motif GATCKYASRAATSWBCACWAKGYTTTKTGATDYRT GCCTCAGTTTCCY GATCKYASRAATSWBSMCTMWGTTTYBTGATDYRT Direction: Forward Position #: 16 Overlap #: 13 Alignment: GATCKYASRAATSWBCACWAKGYTTTKTGATDYRT ---------------GCCTCAGTTTCCY------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 104 Combined Motif Original Motif Reverse Complement GATCKYASRAATSWBSMCTMWGTTTYBTGATDYRT CTCCAGKTMCATCCATGTTG GATCKYASRAATSWBSTCYADGTHYATYSATGTKK Direction: Forward Position #: 16 Overlap #: 20 Alignment: GATCKYASRAATSWBSMCTMWGTTTYBTGATDYRT ---------------CTCCAGKTMCATCCATGTTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 145 Combined Motif Reverse Complement Reverse Complement RYACATSKATKHACHTKGASBWSATTKSTKRGATC TYTGTCMTTTTGTGACTGGC RYACATSKATKHACHTBKDBCHKWTTKKKDMKDKC Direction: Forward Position #: 16 Overlap #: 20 Alignment: RYACATSKATKHACHTKGASBWSATTKSTKRGATC ---------------TYTGTCMTTTTGTGACTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 99 Combined Motif Original Motif Reverse Complement RYACATSKATKHACHTBKDBCHKWTTKKKDMKDKC AATGAKATCATGTCYTTTGC RYACATSKATKHACHWAKGABATHDTGTBHTTTGC Direction: Forward Position #: 16 Overlap #: 20 Alignment: RYACATSKATKHACHTBKDBCHKWTTKKKDMKDKC ---------------AATGAKATCATGTCYTTTGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 328 Combined Motif Reverse Complement Reverse Complement GCAAAHBACADDATBTCRTWDGTHYATYSATGTKK KACATTGATTTTGTATC GCAAAHBACADDATBKMMHTTGWTTTTBBATSTKK Direction: Forward Position #: 16 Overlap #: 17 Alignment: GCAAAHBACADDATBTCRTWDGTHYATYSATGTKK ---------------KACATTGATTTTGTATC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 35 Combined Motif Original Motif Reverse Complement GCAAAHBACADDATBKMMHTTGWTTTTBBATSTKK AAGACGGGTGATTTCTG GCAAAHBACADDATBWAGAHKGDTKATTTMTGTKK Direction: Forward Position #: 16 Overlap #: 17 Alignment: GCAAAHBACADDATBKMMHTTGWTTTTBBATSTKK ---------------AAGACGGGTGATTTCTG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 86 Combined Motif Reverse Complement Reverse Complement RYACARAAATYAHCYDTCTWBATHDTGTBHTTTGC VMATTTAKTGAGCACCTACT RYACARAAATYAHCYDHMTTKATTGWGYHCHTHSY Direction: Forward Position #: 16 Overlap #: 20 Alignment: RYACARAAATYAHCYDTCTWBATHDTGTBHTTTGC ---------------VMATTTAKTGAGCACCTACT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 293 Combined Motif Original Motif Original Motif RYACARAAATYAHCYDHMTTKATTGWGYHCHTHSY CTGACTGGGAGACACCTCCC RYACARAAATYAHCYCTRWYTRKKARRCACCTCCC Direction: Forward Position #: 16 Overlap #: 20 Alignment: RYACARAAATYAHCYDHMTTKATTGWGYHCHTHSY ---------------CTGACTGGGAGACACCTCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 308 Combined Motif Original Motif Reverse Complement RYACARAAATYAHCYCTRWYTRKKARRCACCTCCC GTTATTAATTGGCCTAATTT RYACARAAATYAHCYBTDATTARKWGGCMYMWYYY Direction: Forward Position #: 16 Overlap #: 20 Alignment: RYACARAAATYAHCYCTRWYTRKKARRCACCTCCC ---------------GTTATTAATTGGCCTAATTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 23 Combined Motif Original Motif Reverse Complement RYACARAAATYAHCYBTDATTARKWGGCMYMWYYY ACTCCCTAGTGAGATGAACC RYACARAAATYAHCYAYTMYYDAGTGRSATRAACC Direction: Forward Position #: 16 Overlap #: 20 Alignment: RYACARAAATYAHCYBTDATTARKWGGCMYMWYYY ---------------ACTCCCTAGTGAGATGAACC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 162 Combined Motif Reverse Complement Reverse Complement GGTTMATSKCACTDKKRAKTKGDTKATTTMTGTKK CAAGGTCCAT GGTTMATSKCACTDKBAAGGTSVWTATTTMTGTKK Direction: Forward Position #: 16 Overlap #: 10 Alignment: GGTTMATSKCACTDKKRAKTKGDTKATTTMTGTKK ---------------CAAGGTCCAT---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 112 Combined Motif Original Motif Original Motif GGTTMATSKCACTDKBAAGGTSVWTATTTMTGTKK GCTGTGTGACCTTGGGCAAG GGTTMATSKCWSTGTGAMBKTSGDYAWKTMTGTKK Direction: Forward Position #: 9 Overlap #: 20 Alignment: GGTTMATSKCACTDKBAAGGTSVWTATTTMTGTKK --------GCTGTGTGACCTTGGGCAAG------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 54 Combined Motif Reverse Complement Original Motif RYACARAYWTKHCSARBYTCACASWGYSATRAACC AAGGAAAAGAAA RYACARAYWTKHCSAAABKHAMASARMSATRAACC Direction: Forward Position #: 16 Overlap #: 12 Alignment: RYACARAYWTKHCSARBYTCACASWGYSATRAACC ---------------AAGGAAAAGAAA-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 225 Combined Motif Reverse Complement Reverse Complement GGTTMATSYKTSTYTHYBTTTSGDYAWKTMTGTKK AAGTTCTKGGKTACATGTGC GGTTMATSYKTSTYTAAGTTYBGGGDTAYATGTGC Direction: Forward Position #: 16 Overlap #: 20 Alignment: GGTTMATSYKTSTYTHYBTTTSGDYAWKTMTGTKK ---------------AAGTTCTKGGKTACATGTGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 191 Combined Motif Reverse Complement Original Motif GCACATKTADCCCVKAACTTAMASARMSATRAACC AAAGTGCCGAGAKTGCAGC GCACATKTADCCCVKAAMKTRCMSAGAKWKCARCC Direction: Forward Position #: 16 Overlap #: 19 Alignment: GCACATKTADCCCVKAACTTAMASARMSATRAACC ---------------AAAGTGCCGAGAKTGCAGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 356 Combined Motif Original Motif Original Motif GCACATKTADCCCVKAAMKTRCMSAGAKWKCARCC AATTAAAAGACACAGACTG GCACATKTADCCCVKAAWTWAMAGASACAGMMTSC Direction: Forward Position #: 16 Overlap #: 19 Alignment: GCACATKTADCCCVKAAMKTRCMSAGAKWKCARCC ---------------AATTAAAAGACACAGACTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 16 Combined Motif Reverse Complement Reverse Complement GSAYYCTGTSTCTYTWAWTTYBGGGDTAYATGTGC GGGTCAGGGAGTTCCCTTTC GSAYYCTGTSTCTYTKGRTYAGGGRKTTCMYKTKC Direction: Forward Position #: 16 Overlap #: 20 Alignment: GSAYYCTGTSTCTYTWAWTTYBGGGDTAYATGTGC ---------------GGGTCAGGGAGTTCCCTTTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 102 Combined Motif Original Motif Reverse Complement GSAYYCTGTSTCTYTKGRTYAGGGRKTTCMYKTKC GTTGTGAGGATTAAATGAG GSAYYCTGTSTCTYTGKKKTDRGGATTWMMTGWKC Direction: Forward Position #: 16 Overlap #: 19 Alignment: GSAYYCTGTSTCTYTKGRTYAGGGRKTTCMYKTKC ---------------GTTGTGAGGATTAAATGAG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 148 Combined Motif Original Motif Original Motif GSAYYCTGTSTCTYTGKKKTDRGGATTWMMTGWKC AAAGAGAGTCAGCGAAG GSAYYCTGTSTCTYTAAAGWGAGKMWKHVAWGWKC Direction: Forward Position #: 16 Overlap #: 17 Alignment: GSAYYCTGTSTCTYTGKKKTDRGGATTWMMTGWKC ---------------AAAGAGAGTCAGCGAAG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 56 Combined Motif Original Motif Original Motif GSAYYCTGTSTCTYTAAAGWGAGKMWKHVAWGWKC CRTGAGCCACYGYRCCYGGC GSAYYCTGTSTCTYTHRTGAGMSWCHGYRMMBDGC Direction: Forward Position #: 16 Overlap #: 20 Alignment: GSAYYCTGTSTCTYTAAAGWGAGKMWKHVAWGWKC ---------------CRTGAGCCACYGYRCCYGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 333 Combined Motif Reverse Complement Original Motif GCDBRRMKCHGWSRCTCAKDAMAGASACAGMMTSC TAGATAATAGCTCCAGCTTT GCDBRRMKCHGWSRCTMRWTAAWRRCWCMRRCTTY Direction: Forward Position #: 16 Overlap #: 20 Alignment: GCDBRRMKCHGWSRCTCAKDAMAGASACAGMMTSC ---------------TAGATAATAGCTCCAGCTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 319 Combined Motif Original Motif Reverse Complement GCDBRRMKCHGWSRCTMRWTAAWRRCWCMRRCTTY TTGTTAAAAACTA GCDBRRMKCHGWSRCTWGTTAAAAACTMMRRCTTY Direction: Forward Position #: 16 Overlap #: 13 Alignment: GCDBRRMKCHGWSRCTMRWTAAWRRCWCMRRCTTY ---------------TTGTTAAAAACTA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 57 Combined Motif Reverse Complement Original Motif MAAGMKRYAGTTTTTAACWAGMSWCHGYRMMBDGC AAATATTTATT MAAGMKRYAGTTTTTAAMTAKHTAYTGYRMMBDGC Direction: Forward Position #: 16 Overlap #: 11 Alignment: MAAGMKRYAGTTTTTAACWAGMSWCHGYRMMBDGC ---------------AAATATTTATT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 141 Combined Motif Original Motif Reverse Complement MAAGMKRYAGTTTTTAAMTAKHTAYTGYRMMBDGC CTACATGGACCTT MAAGMKRYAGTTTTTMWAYATGGACCKYRMMBDGC Direction: Forward Position #: 16 Overlap #: 13 Alignment: MAAGMKRYAGTTTTTAAMTAKHTAYTGYRMMBDGC ---------------CTACATGGACCTT------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 43 Combined Motif Reverse Complement Reverse Complement GCDBRRMMRGGTCCATKTWRAAAAACTMMRRCTTY AGGAGRCMCTCTGCCTGGC GCDBRRMMRGGTCCAWGKAGAMMMWCTRCMKSKCY Direction: Forward Position #: 16 Overlap #: 19 Alignment: GCDBRRMMRGGTCCATKTWRAAAAACTMMRRCTTY ---------------AGGAGRCMCTCTGCCTGGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 224 Combined Motif Original Motif Reverse Complement GCDBRRMMRGGTCCAWGKAGAMMMWCTRCMKSKCY CAAAGTCTTAACTCATT GCDBRRMMRGGTCCAHRRAGWCTYAMYKCATKKCY Direction: Forward Position #: 16 Overlap #: 17 Alignment: GCDBRRMMRGGTCCAWGKAGAMMMWCTRCMKSKCY ---------------CAAAGTCTTAACTCATT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 226 Combined Motif Reverse Complement Reverse Complement MGYRATGRKYTMAGWCTKKDTGGACCKYRMMBDGC CCATGTTTATT MGYRATGRKYTMAGWCYATGTTTAYTKYRMMBDGC Direction: Forward Position #: 16 Overlap #: 11 Alignment: MGYRATGRKYTMAGWCTKKDTGGACCKYRMMBDGC ---------------CCATGTTTATT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 232 Combined Motif Reverse Complement Reverse Complement GCDBRRMMRAMTAAACATKGWCTYAMYKCATKKCY AAGTCTCCCAATTACAACT GCDBRRMMRAMTAAAMAKTSTCCCAATTMMWASTY Direction: Forward Position #: 16 Overlap #: 19 Alignment: GCDBRRMMRAMTAAACATKGWCTYAMYKCATKKCY ---------------AAGTCTCCCAATTACAACT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 249 Combined Motif Original Motif Reverse Complement GCDBRRMMRAMTAAAMAKTSTCCCAATTMMWASTY TTGGTGGTCTCTTCACA GCDBRRMMRAMTAAAWWGKBKSTCWMTTCAMASTY Direction: Forward Position #: 16 Overlap #: 17 Alignment: GCDBRRMMRAMTAAAMAKTSTCCCAATTMMWASTY ---------------TTGGTGGTCTCTTCACA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 113 Combined Motif Original Motif Reverse Complement GCDBRRMMRAMTAAAWWGKBKSTCWMTTCAMASTY TAGGAAGTG GCDBRRMMRAMTAAATAGGDRGTSWMTTCAMASTY Direction: Forward Position #: 16 Overlap #: 9 Alignment: GCDBRRMMRAMTAAAWWGKBKSTCWMTTCAMASTY ---------------TAGGAAGTG----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 181 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 181 Motif 322 Reverse Complement Original Motif ATTTGCATTT AGGGCCTTTGCASWTGC AGGGCMTTTGCAYTTGC Direction: Forward Position #: 6 Overlap #: 10 Alignment: -----ATTTGCATTT-- AGGGCCTTTGCASWTGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 25 Original Motif Original Motif AGGGCMTTTGCAYTTGC CATTTCCAWCTGAGGTAC CATTTCCAKSKSAKKTRCAYTTGC Direction: Forward Position #: 8 Overlap #: 11 Alignment: -------AGGGCMTTTGCAYTTGC CATTTCCAWCTGAGGTAC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 233 Combined Motif Reverse Complement Original Motif GCAAMTGKAYYTSRSYTGGAAATG GTTAACTGTAAAACAGCCT GCAAMTGKAYBTTAVCTGKAAAWSAGCCT Direction: Forward Position #: 11 Overlap #: 14 Alignment: GCAAMTGKAYYTSRSYTGGAAATG----- ----------GTTAACTGTAAAACAGCCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 214 Combined Motif Original Motif Original Motif GCAAMTGKAYBTTAVCTGKAAAWSAGCCT CTCAGGAATGGAAAACC GCAAMTGKAYBTCWCMKGRAWRDVARMCY Direction: Forward Position #: 13 Overlap #: 17 Alignment: GCAAMTGKAYBTTAVCTGKAAAWSAGCCT ------------CTCAGGAATGGAAAACC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 106 Combined Motif Original Motif Reverse Complement GCAAMTGKAYBTCWCMKGRAWRDVARMCY GGGATTGTAAATACACCAAT GCAAMTGKAYBTBGSATKGWAAADAMACCAAT Direction: Forward Position #: 13 Overlap #: 17 Alignment: GCAAMTGKAYBTCWCMKGRAWRDVARMCY--- ------------GGGATTGTAAATACACCAAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 16 Combined Motif Original Motif Original Motif GCAAMTGKAYBTBGSATKGWAAADAMACCAAT GAAAGGGAACTCCCTGACCC GCAAMTGKAYBTBGGAWAGKRAAYWCMCYRAYCC Direction: Forward Position #: 15 Overlap #: 18 Alignment: GCAAMTGKAYBTBGSATKGWAAADAMACCAAT-- --------------GAAAGGGAACTCCCTGACCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 325 Combined Motif Reverse Complement Reverse Complement GGKTKMGRGWMTTMYCTWTCCBABKTRCAYTTGC TATTTACAGCTGCT GGKTKMGRGWMTTMYYATTYACAGBTGCWYTTGC Direction: Forward Position #: 16 Overlap #: 14 Alignment: GGKTKMGRGWMTTMYCTWTCCBABKTRCAYTTGC ---------------TATTTACAGCTGCT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 190 Combined Motif Original Motif Reverse Complement GGKTKMGRGWMTTMYYATTYACAGBTGCWYTTGC ATCATTCTTATGCCTTTG GGKTKMGRGWMTTMYHWYWTWCWKVTGCHTTTGC Direction: Forward Position #: 16 Overlap #: 18 Alignment: GGKTKMGRGWMTTMYYATTYACAGBTGCWYTTGC ---------------ATCATTCTTATGCCTTTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 281 Combined Motif Original Motif Reverse Complement GGKTKMGRGWMTTMYHWYWTWCWKVTGCHTTTGC ATGATTCCATTT GGKTKMGRGWMTTMYATGATTCHWDTKCHTTTGC Direction: Forward Position #: 16 Overlap #: 12 Alignment: GGKTKMGRGWMTTMYHWYWTWCWKVTGCHTTTGC ---------------ATGATTCCATTT------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 310 Combined Motif Original Motif Original Motif GGKTKMGRGWMTTMYATGATTCHWDTKCHTTTGC CCCATGCAAGTCYRAAATCC GGKTKMGRGWMTTMYMYCATKCAAGTBCVWWWKCC Direction: Forward Position #: 16 Overlap #: 19 Alignment: GGKTKMGRGWMTTMYATGATTCHWDTKCHTTTGC- ---------------CCCATGCAAGTCYRAAATCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 231 Combined Motif Original Motif Original Motif GGKTKMGRGWMTTMYMYCATKCAAGTBCVWWWKCC ACAAGGCAAGTCCCTTCY GGKTKMGRGWMTTMYACMAKGCAAGTCCCTTHTCC Direction: Forward Position #: 16 Overlap #: 18 Alignment: GGKTKMGRGWMTTMYMYCATKCAAGTBCVWWWKCC ---------------ACAAGGCAAGTCCCTTCY-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 314 Combined Motif Original Motif Original Motif GGKTKMGRGWMTTMYACMAKGCAAGTCCCTTHTCC GGAACGCACAT GGKTKMGRGWMTTMYRSAACGCAMRTCCCTTHTCC Direction: Forward Position #: 16 Overlap #: 11 Alignment: GGKTKMGRGWMTTMYACMAKGCAAGTCCCTTHTCC ---------------GGAACGCACAT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 58 Combined Motif Reverse Complement Original Motif GGADAAGGGAKRTGCGTTSMKRAAYWCMCYRAYCC ATGGACAYTTRGGTTGHTTC GGADAAGGGAKRTGCDTKGABAHWTWSVYTGATYC Direction: Forward Position #: 16 Overlap #: 20 Alignment: GGADAAGGGAKRTGCGTTSMKRAAYWCMCYRAYCC ---------------ATGGACAYTTRGGTTGHTTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 230 Combined Motif Reverse Complement Reverse Complement GKATCAKVSWAWHTBTCYADGCAMRTCCCTTHTCC TTTTCACATGCCTTTCT GKATCAKVSWAWHTBTYTWCRCATGYCYYTYTTCC Direction: Forward Position #: 16 Overlap #: 17 Alignment: GKATCAKVSWAWHTBTCYADGCAMRTCCCTTHTCC ---------------TTTTCACATGCCTTTCT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 349 Combined Motif Original Motif Reverse Complement GKATCAKVSWAWHTBTYTWCRCATGYCYYTYTTCC TTCAMTCATGATTTGGCTCT GKATCAKVSWAWHTBTTYACTCATGMYTTKGYTCY Direction: Forward Position #: 16 Overlap #: 20 Alignment: GKATCAKVSWAWHTBTYTWCRCATGYCYYTYTTCC ---------------TTCAMTCATGATTTGGCTCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 287 Combined Motif Reverse Complement Original Motif MGAKCYAAMYCATGAGTKAABAHWTWSVYTGATYC CATTATGCTAARTG MGAKCYAAMYCATGASWTWATRCTWAGBBTGATYC Direction: Forward Position #: 16 Overlap #: 14 Alignment: MGAKCYAAMYCATGAGTKAABAHWTWSVYTGATYC ---------------CATTATGCTAARTG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 18 Combined Motif Original Motif Reverse Complement MGAKCYAAMYCATGASWTWATRCTWAGBBTGATYC CCCYAATACTGCGCTTTTC MGAKCYAAMYCATGACMYYAWTAYTRSKCTKWTCC Direction: Forward Position #: 16 Overlap #: 19 Alignment: MGAKCYAAMYCATGASWTWATRCTWAGBBTGATYC ---------------CCCYAATACTGCGCTTTTC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 195 Combined Motif Original Motif Reverse Complement MGAKCYAAMYCATGACMYYAWTAYTRSKCTKWTCC ACCCAATWTGTAGTCTTTTA MGAKCYAAMYCATGAMCCCAATHTKKAGYYTTTYM Direction: Forward Position #: 16 Overlap #: 20 Alignment: MGAKCYAAMYCATGACMYYAWTAYTRSKCTKWTCC ---------------ACCCAATWTGTAGTCTTTTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 81 Combined Motif Reverse Complement Reverse Complement RMAAAMMCTRYAHATTGGGYTCATGMYTTKGYTCY ATTTTACAGATG RMAAAMMCTRYAHATWKKKTACAKRTKTTKGYTCY Direction: Forward Position #: 16 Overlap #: 12 Alignment: RMAAAMMCTRYAHATTGGGYTCATGMYTTKGYTCY ---------------ATTTTACAGATG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 145 Combined Motif Original Motif Reverse Complement RMAAAMMCTRYAHATWKKKTACAKRTKTTKGYTCY TYTGTCMTTTTGTGACTGGC RMAAAMMCTRYAHATTTTKTMCWTDTGTKDCTKSC Direction: Forward Position #: 16 Overlap #: 20 Alignment: RMAAAMMCTRYAHATWKKKTACAKRTKTTKGYTCY ---------------TYTGTCMTTTTGTGACTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 353 Combined Motif Original Motif Reverse Complement RMAAAMMCTRYAHATTTTKTMCWTDTGTKDCTKSC GCTTCCATGTG RMAAAMMCTRYAHATKYTTYCMTKTKGTKDCTKSC Direction: Forward Position #: 16 Overlap #: 11 Alignment: RMAAAMMCTRYAHATTTTKTMCWTDTGTKDCTKSC ---------------GCTTCCATGTG--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 232 Combined Motif Original Motif Original Motif RMAAAMMCTRYAHATKYTTYCMTKTKGTKDCTKSC AGTTGTAATTGGGAGACTT RMAAAMMCTRYAHATAGTTSYAWTTGGKAGMYTTC Direction: Forward Position #: 16 Overlap #: 19 Alignment: RMAAAMMCTRYAHATKYTTYCMTKTKGTKDCTKSC ---------------AGTTGTAATTGGGAGACTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 328 Combined Motif Reverse Complement Reverse Complement GAAKYCTYCCAAWTMSAACTATHTKKAGYYTTTYM KACATTGATTTTGTATC GAAKYCTYCCAAWTMBAMMTWKATTTWGTATYTYM Direction: Forward Position #: 16 Overlap #: 17 Alignment: GAAKYCTYCCAAWTMSAACTATHTKKAGYYTTTYM ---------------KACATTGATTTTGTATC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 346 Combined Motif Original Motif Reverse Complement GAAKYCTYCCAAWTMBAMMTWKATTTWGTATYTYM GAGCTTTAAGATTT GAAKYCTYCCAAWTMGARCTTTAWKWTKTATYTYM Direction: Forward Position #: 16 Overlap #: 14 Alignment: GAAKYCTYCCAAWTMBAMMTWKATTTWGTATYTYM ---------------GAGCTTTAAGATTT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 41 Combined Motif Original Motif Reverse Complement GAAKYCTYCCAAWTMGARCTTTAWKWTKTATYTYM TTTTTTTMTTT GAAKYCTYCCAAWTMKWDHTTTATTTTKTATYTYM Direction: Forward Position #: 16 Overlap #: 11 Alignment: GAAKYCTYCCAAWTMGARCTTTAWKWTKTATYTYM ---------------TTTTTTTMTTT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 119 Combined Motif Reverse Complement Original Motif RMAKATARAAAATAAADDWRYAWTTGGKAGMYTTC AAGTCCAAGATCAAGGTGYY RMAKATARAAAATAAAAGTMYAAKWKSDAGRYKYY Direction: Forward Position #: 16 Overlap #: 20 Alignment: RMAKATARAAAATAAADDWRYAWTTGGKAGMYTTC ---------------AAGTCCAAGATCAAGGTGYY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 7 Combined Motif Reverse Complement Reverse Complement KMYMMCTDSRWYTTKRACTTTTATTTTKTATYTYM TTTYTWTTTTTTYTWGAGAC KMYMMCTDSRWYTTKDWYTTTTWTTTTTTWKAKHM Direction: Forward Position #: 16 Overlap #: 20 Alignment: KMYMMCTDSRWYTTKRACTTTTATTTTKTATYTYM ---------------TTTYTWTTTTTTYTWGAGAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 290 Combined Motif Original Motif Reverse Complement KMYMMCTDSRWYTTKDWYTTTTWTTTTTTWKAKHM CTGTTTGCCTGGGTATCA KMYMMCTDSRWYTTKCTBTTTKCYTKKKTATCDHM Direction: Forward Position #: 16 Overlap #: 18 Alignment: KMYMMCTDSRWYTTKDWYTTTTWTTTTTTWKAKHM ---------------CTGTTTGCCTGGGTATCA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 254 Combined Motif Reverse Complement Original Motif RHDGATAYYYAKGYAAABAGYAAKWKSDAGRYKYY AAAATCACAAGCATTCCTAT RHDGATAYYYAKGYAAAAATCAVDAGCAWKVYTHY Direction: Forward Position #: 16 Overlap #: 20 Alignment: RHDGATAYYYAKGYAAABAGYAAKWKSDAGRYKYY ---------------AAAATCACAAGCATTCCTAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 356 Combined Motif Original Motif Original Motif RHDGATAYYYAKGYAAAAATCAVDAGCAWKVYTHY AATTAAAAGACACAGACTG RHDGATAYYYAKGYAAAWWWMAAGASMMAGACTRY Direction: Forward Position #: 16 Overlap #: 19 Alignment: RHDGATAYYYAKGYAAAAATCAVDAGCAWKVYTHY ---------------AATTAAAAGACACAGACTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 115 Combined Motif Original Motif Reverse Complement RHDGATAYYYAKGYAAAWWWMAAGASMMAGACTRY HAGTGGKATTGCTGGATCAT RHDGATAYYYAKGYAAAKTRVRAKWGCTRGAYYAT Direction: Forward Position #: 16 Overlap #: 20 Alignment: RHDGATAYYYAKGYAAAWWWMAAGASMMAGACTRY ---------------HAGTGGKATTGCTGGATCAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 307 Combined Motif Original Motif Original Motif RHDGATAYYYAKGYAAAKTRVRAKWGCTRGAYYAT AGATGCCAGCCAGAGCTCT RHDGATAYYYAKGYAARATGCVAGYCMKAGMTCWT Direction: Forward Position #: 16 Overlap #: 19 Alignment: RHDGATAYYYAKGYAAAKTRVRAKWGCTRGAYYAT ---------------AGATGCCAGCCAGAGCTCT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 70 Combined Motif Original Motif Original Motif RHDGATAYYYAKGYAARATGCVAGYCMKAGMTCWT CTATTGTGAATARTGCTGC RHDGATAYYYAKGYAMWATKSYRRAYARWGCTSYT Direction: Forward Position #: 16 Overlap #: 19 Alignment: RHDGATAYYYAKGYAARATGCVAGYCMKAGMTCWT ---------------CTATTGTGAATARTGCTGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 83 Combined Motif Reverse Complement Original Motif AKSAGCWMTMTKKMSRATWRTKCYTKKKTATCDHM AAAATGTGGTAYATAYAYAC AKSAGCWMTMTKKMSAAWATKTBBTDBRTATMHAC Direction: Forward Position #: 16 Overlap #: 20 Alignment: AKSAGCWMTMTKKMSRATWRTKCYTKKKTATCDHM ---------------AAAATGTGGTAYATAYAYAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 66 Combined Motif Original Motif Original Motif AKSAGCWMTMTKKMSAAWATKTBBTDBRTATMHAC ACACACAYACACACACACA AKSAGCWMTMTKKMSAMAHABWBVYAYAYAYAYAC Direction: Forward Position #: 16 Overlap #: 19 Alignment: AKSAGCWMTMTKKMSAAWATKTBBTDBRTATMHAC ---------------ACACACAYACACACACACA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 171 Combined Motif Reverse Complement Reverse Complement GTKTKTMTKTMBBWBTDTYTSYRRAYARWGCTSYT ACTTTGGACTGTGGACTTTT GTKTKTMTKTMBBWBAVTTTGKAVTGWGKRCTTTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: GTKTKTMTKTMBBWBTDTYTSYRRAYARWGCTSYT ---------------ACTTTGGACTGTGGACTTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 154 Combined Motif Original Motif Reverse Complement GTKTKTMTKTMBBWBAVTTTGKAVTGWGKRCTTTT TCCTATGAGAATCTAATG GTKTKTMTKTMBBWBWCYTWKGAGARTSTAMTKTT Direction: Forward Position #: 16 Overlap #: 18 Alignment: GTKTKTMTKTMBBWBAVTTTGKAVTGWGKRCTTTT ---------------TCCTATGAGAATCTAATG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 6 Combined Motif Original Motif Original Motif GTKTKTMTKTMBBWBWCYTWKGAGARTSTAMTKTT GCTCACTGCAASCTC GTKTKTMTKTMBBWBKCTYAYKRCAABCTMMTKTT Direction: Forward Position #: 16 Overlap #: 15 Alignment: GTKTKTMTKTMBBWBWCYTWKGAGARTSTAMTKTT ---------------GCTCACTGCAASCTC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 191 Combined Motif Original Motif Reverse Complement GTKTKTMTKTMBBWBKCTYAYKRCAABCTMMTKTT GCTGCARTCTCGGCACTTT GTKTKTMTKTMBBWBGCTGMHDWCWVGSYACTTTT Direction: Forward Position #: 16 Overlap #: 19 Alignment: GTKTKTMTKTMBBWBKCTYAYKRCAABCTMMTKTT ---------------GCTGCARTCTCGGCACTTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 55 Combined Motif Reverse Complement Reverse Complement AAAAGTKSCBWGWHHRCAGCBWBVYAYAYAYAYAC ATGGCTGAATAKTATTCCAT AAAAGTKSCBWGWHHAHRGCTDVATABWWWTMCAY Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAAAGTKSCBWGWHHRCAGCBWBVYAYAYAYAYAC ---------------ATGGCTGAATAKTATTCCAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 235 Combined Motif Reverse Complement Reverse Complement MTGRAWWWVTATBHAGCKHTHDWCWVGSYACTTTT GCCAATTTCTCCCATTTGGA MTGRAWWWVTATBHAGCCAWTTTCTCCCHWYTKKW Direction: Forward Position #: 16 Overlap #: 20 Alignment: MTGRAWWWVTATBHAGCKHTHDWCWVGSYACTTTT ---------------GCCAATTTCTCCCATTTGGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 262 Combined Motif Original Motif Original Motif MTGRAWWWVTATBHAGCCAWTTTCTCCCHWYTKKW CTCAGTGTTAATCTCCTGTC MTGRAWWWVTATBHASYCAGTKTYWMYCTCCTGTC Direction: Forward Position #: 16 Overlap #: 20 Alignment: MTGRAWWWVTATBHAGCCAWTTTCTCCCHWYTKKW ---------------CTCAGTGTTAATCTCCTGTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 178 Combined Motif Reverse Complement Reverse Complement GACAGGAGMYWMAYACTGMSTDVATABWWWTMCAY ATGTGGAGGTGGAAGACAGT GACAGGAGMYWMAYAMTGWGKAGRTRGAAGWCMRT Direction: Forward Position #: 16 Overlap #: 20 Alignment: GACAGGAGMYWMAYACTGMSTDVATABWWWTMCAY ---------------ATGTGGAGGTGGAAGACAGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 103 Combined Motif Original Motif Original Motif GACAGGAGMYWMAYAMTGWGKAGRTRGAAGWCMRT AAGTGAAATAA GACAGGAGMYWMAYAAWGTGAARKWAGAAGWCMRT Direction: Forward Position #: 16 Overlap #: 11 Alignment: GACAGGAGMYWMAYAMTGWGKAGRTRGAAGWCMRT ---------------AAGTGAAATAA--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 240 Combined Motif Original Motif Original Motif GACAGGAGMYWMAYAAWGTGAARKWAGAAGWCMRT ATGTGCWGTCCC GACAGGAGMYWMAYAATGTGCWGTCMSAAGWCMRT Direction: Forward Position #: 16 Overlap #: 12 Alignment: GACAGGAGMYWMAYAAWGTGAARKWAGAAGWCMRT ---------------ATGTGCWGTCCC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 227 Combined Motif Reverse Complement Original Motif AMYGWCTTSRGACWGCACATTKTYWMYCTCCTGTC CCCAAATCTCATSTTGAAT AMYGWCTTSRGACWGCMCAWWTYTMATCTYSWRTC Direction: Forward Position #: 16 Overlap #: 19 Alignment: AMYGWCTTSRGACWGCACATTKTYWMYCTCCTGTC ---------------CCCAAATCTCATSTTGAAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 317 Combined Motif Reverse Complement Original Motif GAKWSMAGATRAKAWWTGRGCWGTCMSAAGWCMRT ACATGCTACAACAT GAKWSMAGATRAKAWAYRTGCTRYAACAWGWCMRT Direction: Forward Position #: 16 Overlap #: 14 Alignment: GAKWSMAGATRAKAWWTGRGCWGTCMSAAGWCMRT ---------------ACATGCTACAACAT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 194 Combined Motif Original Motif Original Motif GAKWSMAGATRAKAWAYRTGCTRYAACAWGWCMRT CAAGGGTATAYGAGTAGCTG GAKWSMAGATRAKAWMAAGGSTATAHSADTASCDK Direction: Forward Position #: 16 Overlap #: 20 Alignment: GAKWSMAGATRAKAWAYRTGCTRYAACAWGWCMRT ---------------CAAGGGTATAYGAGTAGCTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 14 Combined Motif Original Motif Original Motif GAKWSMAGATRAKAWMAAGGSTATAHSADTASCDK ACCTGGAAAATCGGGTCACT GAKWSMAGATRAKAWACMTGGWAWATCRGGWCMCT Direction: Forward Position #: 16 Overlap #: 20 Alignment: GAKWSMAGATRAKAWMAAGGSTATAHSADTASCDK ---------------ACCTGGAAAATCGGGTCACT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 99 Combined Motif Original Motif Original Motif GAKWSMAGATRAKAWACMTGGWAWATCRGGWCMCT GCAAAKGACATGATYTCATT GAKWSMAGATRAKAWRCAWRGRAMATSAKBTCATT Direction: Forward Position #: 16 Overlap #: 20 Alignment: GAKWSMAGATRAKAWACMTGGWAWATCRGGWCMCT ---------------GCAAAKGACATGATYTCATT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 186 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 186 Motif 57 Original Motif Reverse Complement AAATATTT AATAAATATTT AAWWAWTWTTT Direction: Forward Position #: 1 Overlap #: 8 Alignment: AAATATTT--- AATAAATATTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 168 Reverse Complement Reverse Complement AAAWAWTWWTT GGTGGGAGAAATACCT GGTGRRADAAWTAYYT Direction: Forward Position #: 5 Overlap #: 11 Alignment: ----AAAWAWTWWTT- GGTGGGAGAAATACCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 329 Reverse Complement Reverse Complement AKKTAWTTHTMMCACC GCTAATATATCCCTCCC GCTAATATDTMYYTCYCMCACC Direction: Forward Position #: 7 Overlap #: 11 Alignment: ------AKKTAWTTHTMMCACC GCTAATATATCCCTCCC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 346 Combined Motif Reverse Complement Reverse Complement GGTGRGKGAKKRADATATTAGC GAGCTTTAAGATTT GGTGRGKGAGAGMTWTAWKAKYT Direction: Forward Position #: 10 Overlap #: 13 Alignment: GGTGRGKGAKKRADATATTAGC- ---------GAGCTTTAAGATTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 330 Combined Motif Original Motif Original Motif GGTGRGKGAGAGMTWTAWKAKYT AAAACCAGCAAGTTTTTAT GGTGRGKGARARAYHWRYWAGTTTTTAT Direction: Forward Position #: 10 Overlap #: 14 Alignment: GGTGRGKGAGAGMTWTAWKAKYT----- ---------AAAACCAGCAAGTTTTTAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 70 Combined Motif Original Motif Reverse Complement GGTGRGKGARARAYHWRYWAGTTTTTAT GCAGCAMTATTCACAATAG GGTGRGKGARARRCADVAHWRTTYWYAWTAG Direction: Forward Position #: 13 Overlap #: 16 Alignment: GGTGRGKGARARAYHWRYWAGTTTTTAT--- ------------GCAGCAMTATTCACAATAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 55 Combined Motif Original Motif Reverse Complement GGTGRGKGARARRCADVAHWRTTYWYAWTAG ATGGCTGAATAKTATTCCAT GGTGRGKGARARRMWGGMTDRWTWDTATTMSAT Direction: Forward Position #: 14 Overlap #: 18 Alignment: GGTGRGKGARARRCADVAHWRTTYWYAWTAG-- -------------ATGGCTGAATAKTATTCCAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 179 Combined Motif Reverse Complement Reverse Complement ATSYAATADWAWKHARCCWYMKTKTCYCMCACC GAATACCTCCTGAAGGACCT ATSYAATADWAWKHDRMYACCTYBTSAMVSACCT Direction: Forward Position #: 15 Overlap #: 19 Alignment: ATSYAATADWAWKHARCCWYMKTKTCYCMCACC- --------------GAATACCTCCTGAAGGACCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 137 Combined Motif Original Motif Reverse Complement ATSYAATADWAWKHDRMYACCTYBTSAMVSACCT TWTACCTATGTAACAAACCT ATSYAATADWAWKHDWATACCTHTKTAACVAMCYT Direction: Forward Position #: 16 Overlap #: 19 Alignment: ATSYAATADWAWKHDRMYACCTYBTSAMVSACCT- ---------------TWTACCTATGTAACAAACCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 308 Combined Motif Original Motif Reverse Complement ATSYAATADWAWKHDWATACCTHTKTAACVAMCYT GTTATTAATTGGCCTAATTT ATSYAATADWAWKHDKTTAYYWATTKRMCTAAYTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: ATSYAATADWAWKHDWATACCTHTKTAACVAMCYT ---------------GTTATTAATTGGCCTAATTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 63 Combined Motif Reverse Complement Reverse Complement AAMTTAGRMYAATWMMTAAYHDRWTWDTATTMSAT AAAMAMMKMATGTTCTCACT AAMTTAGRMYAATWMAWAMAMVDMWTGTWYTCAMT Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAMTTAGRMYAATWMMTAAYHDRWTWDTATTMSAT ---------------AAAMAMMKMATGTTCTCACT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 18 Combined Motif Reverse Complement Reverse Complement ARTGAKWACAWYHVRTYTWTYWATTKRMCTAAYTT CCCYAATACTGCGCTTTTC ARTGAKWACAWYHVRCCYHWWTAYTGVVCTWWTYT Direction: Forward Position #: 16 Overlap #: 19 Alignment: ARTGAKWACAWYHVRTYTWTYWATTKRMCTAAYTT ---------------CCCYAATACTGCGCTTTTC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 83 Combined Motif Original Motif Reverse Complement ARTGAKWACAWYHVRCCYHWWTAYTGVVCTWWTYT GTKTMTATMTACCACATTTT ARTGAKWACAWYHVRBYBTAWWWMTRCCMYATTYT Direction: Forward Position #: 16 Overlap #: 20 Alignment: ARTGAKWACAWYHVRCCYHWWTAYTGVVCTWWTYT ---------------GTKTMTATMTACCACATTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 195 Combined Motif Reverse Complement Original Motif AMAATKYGGKARWWWTAVMBMVDMWTGTWYTCAMT TAAAAGACTACAWATTGGGT AMAATKYGGKARWWWTAAAAVACTAYRTAYTSRVT Direction: Forward Position #: 16 Overlap #: 20 Alignment: AMAATKYGGKARWWWTAVMBMVDMWTGTWYTCAMT ---------------TAAAAGACTACAWATTGGGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 124 Combined Motif Reverse Complement Reverse Complement AVMSAMTAKKTAGTVTTTTAWWWMTRCCMYATTYT TTTTATTTT AVMSAMTAKKTAGTVTTTTATTTTTRCCMYATTYT Direction: Forward Position #: 16 Overlap #: 9 Alignment: AVMSAMTAKKTAGTVTTTTAWWWMTRCCMYATTYT ---------------TTTTATTTT----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 202 Combined Motif Reverse Complement Reverse Complement AMAATKYGGKAAAAATAAAAVACTAYRTAYTSRVT GAAACTGCTTTGTGATGTGT AMAATKYGGKAAAAAKAAAMDRCTWTGTRWTGKGT Direction: Forward Position #: 16 Overlap #: 20 Alignment: AMAATKYGGKAAAAATAAAAVACTAYRTAYTSRVT ---------------GAAACTGCTTTGTGATGTGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 357 Combined Motif Original Motif Reverse Complement AMAATKYGGKAAAAAKAAAMDRCTWTGTRWTGKGT TAATTTTATGTGTCAACTTG AMAATKYGGKAAAAATAAWHTKMTKTGTVAWSTKK Direction: Forward Position #: 16 Overlap #: 20 Alignment: AMAATKYGGKAAAAAKAAAMDRCTWTGTRWTGKGT ---------------TAATTTTATGTGTCAACTTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 228 Combined Motif Original Motif Reverse Complement AMAATKYGGKAAAAATAAWHTKMTKTGTVAWSTKK CAAGTAGCT AMAATKYGGKAAAAAYAADTWGCTKTGTVAWSTKK Direction: Forward Position #: 16 Overlap #: 9 Alignment: AMAATKYGGKAAAAATAAWHTKMTKTGTVAWSTKK ---------------CAAGTAGCT----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 333 Combined Motif Original Motif Original Motif AMAATKYGGKAAAAAYAADTWGCTKTGTVAWSTKK TAGATAATAGCTCCAGCTTT AMAATKYGGKAAAAATARATARYWGYKYCADCTTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: AMAATKYGGKAAAAAYAADTWGCTKTGTVAWSTKK ---------------TAGATAATAGCTCCAGCTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 332 Combined Motif Original Motif Reverse Complement AMAATKYGGKAAAAATARATARYWGYKYCADCTTT GTTTAACCATTGAGGGCCAG AMAATKYGGKAAAAAKWDWWAMCAKTGMSRGCYWK Direction: Forward Position #: 16 Overlap #: 20 Alignment: AMAATKYGGKAAAAATARATARYWGYKYCADCTTT ---------------GTTTAACCATTGAGGGCCAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 235 Combined Motif Reverse Complement Reverse Complement YWKGCMSYCARTGRTWWDWYTTTTTRCCMYATTYT GCCAATTTCTCCCATTTGGA YWKGCMSYCARTGRTKMVAHTTTYTCCCATWTKKW Direction: Forward Position #: 16 Overlap #: 20 Alignment: YWKGCMSYCARTGRTWWDWYTTTTTRCCMYATTYT ---------------GCCAATTTCTCCCATTTGGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 347 Combined Motif Reverse Complement Reverse Complement WYYAWATGGGAKAAAHTVRYAMCAKTGMSRGCYWK GTGTGCGAATAGGTGT WYYAWATGGGAKAAAGTGTBMGAATWGRTGKCYWK Direction: Forward Position #: 16 Overlap #: 16 Alignment: WYYAWATGGGAKAAAHTVRYAMCAKTGMSRGCYWK ---------------GTGTGCGAATAGGTGT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 227 Combined Motif Original Motif Reverse Complement WYYAWATGGGAKAAAGTGTBMGAATWGRTGKCYWK ATTCAASATGAGATTTGGG WYYAWATGGGAKAAADTKHVASAWKAGATKTSSDK Direction: Forward Position #: 16 Overlap #: 19 Alignment: WYYAWATGGGAKAAAGTGTBMGAATWGRTGKCYWK ---------------ATTCAASATGAGATTTGGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 224 Combined Motif Reverse Complement Reverse Complement YHSSARATCTYWTSTBDRADTTTYTCCCATWTKKW CAAAGTCTTAACTCATT YHSSARATCTYWTSTYAAAGTYTTWACYMWTTKKW Direction: Forward Position #: 16 Overlap #: 17 Alignment: YHSSARATCTYWTSTBDRADTTTYTCCCATWTKKW ---------------CAAAGTCTTAACTCATT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 19 Combined Motif Original Motif Reverse Complement YHSSARATCTYWTSTYAAAGTYTTWACYMWTTKKW MGGGATATAATCTCCTGGTG YHSSARATCTYWTSTCRRRRTATWAWCTCHTKGTR Direction: Forward Position #: 16 Overlap #: 20 Alignment: YHSSARATCTYWTSTYAAAGTYTTWACYMWTTKKW ---------------MGGGATATAATCTCCTGGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 275 Combined Motif Reverse Complement Reverse Complement MACYADGAGWTWATAKMMMGASAWKAGATKTSSDK TTTAACTCTGTGAG MACYADGAGWTWATATYYAAMKMTGWGAKKTSSDK Direction: Forward Position #: 16 Overlap #: 14 Alignment: MACYADGAGWTWATAKMMMGASAWKAGATKTSSDK ---------------TTTAACTCTGTGAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 129 Combined Motif Original Motif Reverse Complement MACYADGAGWTWATATYYAAMKMTGWGAKKTSSDK TGAGKCAATTAAACCTCTT MACYADGAKDWDWCAWTTAAACCTSTKAKKTSSDK Direction: Forward Position #: 9 Overlap #: 19 Alignment: MACYADGAGWTWATATYYAAMKMTGWGAKKTSSDK --------TGAGKCAATTAAACCTCTT-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 303 Combined Motif Original Motif Reverse Complement MACYADGAKDWDWCAWTTAAACCTSTKAKKTSSDK ACCATCTTTAAGAACT MACYADGAKDWDWCAAYYAWMTYTAWGADBTSSDK Direction: Forward Position #: 16 Overlap #: 16 Alignment: MACYADGAKDWDWCAWTTAAACCTSTKAKKTSSDK ---------------ACCATCTTTAAGAACT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 254 Combined Motif Original Motif Original Motif MACYADGAKDWDWCAAYYAWMTYTAWGADBTSSDK AAAATCACAAGCATTCCTAT MACYADGAKDWDWCAAAMATCWCWARSATTYCTAT Direction: Forward Position #: 16 Overlap #: 20 Alignment: MACYADGAKDWDWCAAYYAWMTYTAWGADBTSSDK ---------------AAAATCACAAGCATTCCTAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 99 Combined Motif Reverse Complement Reverse Complement ATAGMAATSMTWGWGATYTTTGWHWHRTCHTKGTR AATGAKATCATGTCYTTTGC ATAGMAATSMTWGWGAWTKWKRTCWTGTCHTTKKV Direction: Forward Position #: 16 Overlap #: 20 Alignment: ATAGMAATSMTWGWGATYTTTGWHWHRTCHTKGTR ---------------AATGAKATCATGTCYTTTGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 349 Combined Motif Reverse Complement Reverse Complement VYRAADGACAWGAKRWRAWTCWCWARSATTYCTAT TTCAMTCATGATTTGGCTCT VYRAADGACAWGAKRTHMAHYCHTRATWTKKCTVT Direction: Forward Position #: 16 Overlap #: 20 Alignment: VYRAADGACAWGAKRWRAWTCWCWARSATTYCTAT ---------------TTCAMTCATGATTTGGCTCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 280 Combined Motif Original Motif Reverse Complement VYRAADGACAWGAKRTHMAHYCHTRATWTKKCTVT ACATCMTCTGAAATCTAGG VYRAADGACAWGAKRWCAWCYYCTGAWATSTMKGT Direction: Forward Position #: 16 Overlap #: 19 Alignment: VYRAADGACAWGAKRTHMAHYCHTRATWTKKCTVT ---------------ACATCMTCTGAAATCTAGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 315 Combined Motif Original Motif Original Motif VYRAADGACAWGAKRWCAWCYYCTGAWATSTMKGT CCAAACCATATCA VYRAADGACAWGAKRMCAAMCCATRWCATSTMKGT Direction: Forward Position #: 16 Overlap #: 13 Alignment: VYRAADGACAWGAKRWCAWCYYCTGAWATSTMKGT ---------------CCAAACCATATCA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 130 Combined Motif Reverse Complement Original Motif ACYYASATGWKATGGYTTGRKRTCWTGTCHTTKKV ATTATTATYAT ACYYASATGWKATGGWTTRTTATYATGTCHTTKKV Direction: Forward Position #: 16 Overlap #: 11 Alignment: ACYYASATGWKATGGYTTGRKRTCWTGTCHTTKKV ---------------ATTATTATYAT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 41 Combined Motif Original Motif Reverse Complement ACYYASATGWKATGGWTTRTTATYATGTCHTTKKV TTTTTTTMTTT ACYYASATGWKATGGTTTDTTWWTWTGTCHTTKKV Direction: Forward Position #: 16 Overlap #: 11 Alignment: ACYYASATGWKATGGWTTRTTATYATGTCHTTKKV ---------------TTTTTTTMTTT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 328 Combined Motif Original Motif Reverse Complement ACYYASATGWKATGGTTTDTTWWTWTGTCHTTKKV KACATTGATTTTGTATC ACYYASATGWKATGGTWYATTKATTTKKYATYKKV Direction: Forward Position #: 16 Overlap #: 17 Alignment: ACYYASATGWKATGGTTTDTTWWTWTGTCHTTKKV ---------------KACATTGATTTTGTATC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 319 Combined Motif Reverse Complement Reverse Complement VYRKATMRRAAATYAATKWACCATRWCATSTMKGT TTGTTAAAAACTA VYRKATMRRAAATYAWTGTWMMAWAHTATSTMKGT Direction: Forward Position #: 16 Overlap #: 13 Alignment: VYRKATMRRAAATYAATKWACCATRWCATSTMKGT ---------------TTGTTAAAAACTA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 226 Combined Motif Reverse Complement Original Motif ACYYASATADTWTYYWACAWTKATTTKKYATYKKV AATAAACATGG ACYYASATADTWTYYAAYAAWCATKKKKYATYKKV Direction: Forward Position #: 16 Overlap #: 11 Alignment: ACYYASATADTWTYYWACAWTKATTTKKYATYKKV ---------------AATAAACATGG--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 85 Combined Motif Reverse Complement Reverse Complement VYRKATMRRYYATGWTTMTTMMAWAHTATSTMKGT TGGAGAACCTTTATGTCTAG VYRKATMRRYYATGWTKRWKAAMHWTTATGTCTAK Direction: Forward Position #: 16 Overlap #: 20 Alignment: VYRKATMRRYYATGWTTMTTMMAWAHTATSTMKGT ---------------TGGAGAACCTTTATGTCTAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 169 Combined Motif Original Motif Reverse Complement VYRKATMRRYYATGWTKRWKAAMHWTTATGTCTAK TTTTATAGGATTTGGG VYRKATMRRYYATGWTTDTRWAVVATTWKGKCTAK Direction: Forward Position #: 16 Overlap #: 16 Alignment: VYRKATMRRYYATGWTKRWKAAMHWTTATGTCTAK ---------------TTTTATAGGATTTGGG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 58 Combined Motif Reverse Complement Original Motif YTAGYCYWAATVVTWKADAAWCATKKKKYATYKKV ATGGACAYTTRGGTTGHTTC YTAGYCYWAATVVTWWWRRAHAHTTDGGTWKHTTC Direction: Forward Position #: 16 Overlap #: 20 Alignment: YTAGYCYWAATVVTWKADAAWCATKKKKYATYKKV ---------------ATGGACAYTTRGGTTGHTTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 166 Combined Motif Original Motif Original Motif YTAGYCYWAATVVTWWWRRAHAHTTDGGTWKHTTC AAGGGACATTKGAG YTAGYCYWAATVVTWAAGGRACATTKGRKWKHTTC Direction: Forward Position #: 16 Overlap #: 14 Alignment: YTAGYCYWAATVVTWWWRRAHAHTTDGGTWKHTTC ---------------AAGGGACATTKGAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 106 Combined Motif Original Motif Original Motif YTAGYCYWAATVVTWAAGGRACATTKGRKWKHTTC ATTGGTGTATTTACAATCCC YTAGYCYWAATVVTWAWKGGWSWWTTKACAATYYC Direction: Forward Position #: 16 Overlap #: 20 Alignment: YTAGYCYWAATVVTWAAGGRACATTKGRKWKHTTC ---------------ATTGGTGTATTTACAATCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 7 Combined Motif Original Motif Reverse Complement YTAGYCYWAATVVTWAWKGGWSWWTTKACAATYYC TTTYTWTTTTTTYTWGAGAC YTAGYCYWAATVVTWWTTKKWBTTTTTHYWGWGMC Direction: Forward Position #: 16 Overlap #: 20 Alignment: YTAGYCYWAATVVTWAWKGGWSWWTTKACAATYYC ---------------TTTYTWTTTTTTYTWGAGAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 225 Combined Motif Original Motif Reverse Complement YTAGYCYWAATVVTWWTTKKWBTTTTTHYWGWGMC AAGTTCTKGGKTACATGTGC YTAGYCYWAATVVTWAWKTTHTKKKKTACAKRTRC Direction: Forward Position #: 16 Overlap #: 20 Alignment: YTAGYCYWAATVVTWWTTKKWBTTTTTHYWGWGMC ---------------AAGTTCTKGGKTACATGTGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 252 Combined Motif Original Motif Original Motif YTAGYCYWAATVVTWAWKTTHTKKKKTACAKRTRC AATTAGCYRGG YTAGYCYWAATVVTWAATTWGYYGGGTACAKRTRC Direction: Forward Position #: 16 Overlap #: 11 Alignment: YTAGYCYWAATVVTWAWKTTHTKKKKTACAKRTRC ---------------AATTAGCYRGG--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 86 Combined Motif Original Motif Original Motif YTAGYCYWAATVVTWAATTWGYYGGGTACAKRTRC AGTAGGTGCTCARTAAATRB YTAGYCYWAATVVTWARTWRGYBBKSWAYAWRTRY Direction: Forward Position #: 16 Overlap #: 20 Alignment: YTAGYCYWAATVVTWAATTWGYYGGGTACAKRTRC ---------------AGTAGGTGCTCARTAAATRB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 348 Combined Motif Reverse Complement Reverse Complement KMAKWTMTWSRBBMCKWAKTWAVVATTWKGKCTAK CAAASCKGTCATAGGCCAT KMAKWTMTWSRBBMCBAAABHDGTMWTAGGSCWWK Direction: Forward Position #: 16 Overlap #: 19 Alignment: KMAKWTMTWSRBBMCKWAKTWAVVATTWKGKCTAK ---------------CAAASCKGTCATAGGCCAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 49 Combined Motif Original Motif Reverse Complement KMAKWTMTWSRBBMCBAAABHDGTMWTAGGSCWWK GGRRMCAGATGT KMAKWTMTWSRBBMCGRARHCAGWTDTAGGSCWWK Direction: Forward Position #: 16 Overlap #: 12 Alignment: KMAKWTMTWSRBBMCBAAABHDGTMWTAGGSCWWK ---------------GGRRMCAGATGT-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 218 Combined Motif Reverse Complement Reverse Complement YWWGSCCTAHAWCTGHKTMCGYBBKSWAYAWRTRY AAGTWACTT YWWGSCCTAHAWCTGDAKTHRCTHKSWAYAWRTRY Direction: Forward Position #: 16 Overlap #: 9 Alignment: YWWGSCCTAHAWCTGHKTMCGYBBKSWAYAWRTRY ---------------AAGTWACTT----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 124 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 124 Motif 7 Original Motif Original Motif AAAATAAAA GTCTCWAMAAAAAAWAMAAA AAAAATAAAAGTCTCWAMAA Direction: Backward Position #: 2 Overlap #: 9 Alignment: ----------AAAATAAAA- GTCTCWAMAAAAAAWAMAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 337 Combined Motif Reverse Complement Reverse Complement TTYTWGAGACTTTTATTTTT TTTCTAGTTT TTYTWGAGWYTYTWRTTTTT Direction: Forward Position #: 9 Overlap #: 10 Alignment: TTYTWGAGACTTTTATTTTT --------TTTCTAGTTT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 328 Combined Motif Original Motif Reverse Complement TTYTWGAGWYTYTWRTTTTT KACATTGATTTTGTATC TTYTWGAGWWYHTTGWTTTTGTATC Direction: Forward Position #: 9 Overlap #: 12 Alignment: TTYTWGAGWYTYTWRTTTTT----- --------KACATTGATTTTGTATC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 41 Combined Motif Original Motif Reverse Complement TTYTWGAGWWYHTTGWTTTTGTATC TTTTTTTMTTT TTYTWGAGWWTTTTKTTTTTKTATC Direction: Forward Position #: 11 Overlap #: 11 Alignment: TTYTWGAGWWYHTTGWTTTTGTATC ----------TTTTTTTMTTT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 254 Combined Motif Reverse Complement Original Motif GATARAAAAARAAAAWWCTCWAMAA AAAATCACAAGCATTCCTAT GATARAAAAAAAAAWYACWMRMAWWCCTAT Direction: Forward Position #: 11 Overlap #: 15 Alignment: GATARAAAAARAAAAWWCTCWAMAA----- ----------AAAATCACAAGCATTCCTAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 117 Combined Motif Reverse Complement Reverse Complement ATAGGWWTYMYWGTKWTTTTTTTTTKTATC TTYTTGTTGTTGTTGTT ATAGGWWTYMYWGTTHTTKTTKTTKTTRTY Direction: Forward Position #: 14 Overlap #: 17 Alignment: ATAGGWWTYMYWGTKWTTTTTTTTTKTATC -------------TTYTTGTTGTTGTTGTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 356 Combined Motif Original Motif Reverse Complement ATAGGWWTYMYWGTTHTTKTTKTTKTTRTY CAGTCTGTGTCTTTTAATT ATAGGWWTYMYWGYWDTYTKTGTYTTTWWHTT Direction: Forward Position #: 14 Overlap #: 17 Alignment: ATAGGWWTYMYWGTTHTTKTTKTTKTTRTY-- -------------CAGTCTGTGTCTTTTAATT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 73 Combined Motif Original Motif Reverse Complement ATAGGWWTYMYWGYWDTYTKTGTYTTTWWHTT CTTGCAGTTTG ATAGGWWTYMYWGYHTTBYDKKTTKTTWWHTT Direction: Forward Position #: 15 Overlap #: 11 Alignment: ATAGGWWTYMYWGYWDTYTKTGTYTTTWWHTT --------------CTTGCAGTTTG------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 357 Combined Motif Reverse Complement Original Motif AAHWWAAYAARYDKBAADKCWMRMAWWCCTAT CAAGTTGACACATAAAATTA AAHWWAAYAARYDKCAAGTYKAVAMWTMMWATTA Direction: Forward Position #: 15 Overlap #: 18 Alignment: AAHWWAAYAARYDKBAADKCWMRMAWWCCTAT-- --------------CAAGTTGACACATAAAATTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 145 Combined Motif Reverse Complement Reverse Complement TAATWYYAWRTVTYMACTTGYDKKTTKTTWWHTT TYTGTCMTTTTGTGACTGGC TAATWYYAWRTVTYMWYTKKCHTTTTGTKWMTKKC Direction: Forward Position #: 16 Overlap #: 19 Alignment: TAATWYYAWRTVTYMACTTGYDKKTTKTTWWHTT- ---------------TYTGTCMTTTTGTGACTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 102 Combined Motif Original Motif Reverse Complement TAATWYYAWRTVTYMWYTKKCHTTTTGTKWMTKKC GTTGTGAGGATTAAATGAG TAATWYYAWRTVTYMDYTKTBAKKWTKWDATKDKC Direction: Forward Position #: 16 Overlap #: 19 Alignment: TAATWYYAWRTVTYMWYTKKCHTTTTGTKWMTKKC ---------------GTTGTGAGGATTAAATGAG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 195 Combined Motif Reverse Complement Reverse Complement GYDYATDWRAWRYTBAYAMHYKAVAMWTMMWATTA ACCCAATWTGTAGTCTTTTA GYDYATDWRAWRYTBACMMWHTAYRTAKTMTWTTA Direction: Forward Position #: 16 Overlap #: 20 Alignment: GYDYATDWRAWRYTBAYAMHYKAVAMWTMMWATTA ---------------ACCCAATWTGTAGTCTTTTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 154 Combined Motif Reverse Complement Original Motif TAAWARAYTAMMTAHWRRGTBAKKWTKWDATKDKC CATTAGATTCTCATAGGA TAAWARAYTAMMTAHCADKWGATTCTYATADGAKC Direction: Forward Position #: 16 Overlap #: 18 Alignment: TAAWARAYTAMMTAHWRRGTBAKKWTKWDATKDKC ---------------CATTAGATTCTCATAGGA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 130 Combined Motif Original Motif Original Motif TAAWARAYTAMMTAHCADKWGATTCTYATADGAKC ATTATTATYAT TAAWARAYTAMMTAHMDTDTKATTATYATADGAKC Direction: Forward Position #: 16 Overlap #: 11 Alignment: TAAWARAYTAMMTAHCADKWGATTCTYATADGAKC ---------------ATTATTATYAT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 232 Combined Motif Reverse Complement Reverse Complement GYTCHTATKATAATRADADYHTAYRTAKTMTWTTA AAGTCTCCCAATTACAACT GYTCHTATKATAATRAARTCTYCCAAWTACWAYTA Direction: Forward Position #: 16 Overlap #: 19 Alignment: GYTCHTATKATAATRADADYHTAYRTAKTMTWTTA ---------------AAGTCTCCCAATTACAACT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 172 Combined Motif Reverse Complement Reverse Complement TAKTWGTAWTTGGKAGAMTTKATTATYATADGAKC TTCTGTTTCT TAKTWGTAWTTGGKAKWCTKTWTYWTYATADGAKC Direction: Forward Position #: 16 Overlap #: 10 Alignment: TAKTWGTAWTTGGKAGAMTTKATTATYATADGAKC ---------------TTCTGTTTCT---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 181 Combined Motif Original Motif Reverse Complement TAKTWGTAWTTGGKAKWCTKTWTYWTYATADGAKC ATTTGCATTT TAKTWGTAWTTGGKADTYTKYATTTTYATADGAKC Direction: Forward Position #: 16 Overlap #: 10 Alignment: TAKTWGTAWTTGGKAKWCTKTWTYWTYATADGAKC ---------------ATTTGCATTT---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 106 Combined Motif Original Motif Original Motif TAKTWGTAWTTGGKADTYTKYATTTTYATADGAKC ATTGGTGTATTTACAATCCC TAKTWGTAWTTGGKAATTKGTRTWTTTAYAAKMSC Direction: Forward Position #: 16 Overlap #: 20 Alignment: TAKTWGTAWTTGGKADTYTKYATTTTYATADGAKC ---------------ATTGGTGTATTTACAATCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 129 Combined Motif Reverse Complement Reverse Complement GSRRTTKTAAAWAMACYAATTYCCAAWTACWAYTA TGAGKCAATTAAACCTCTT GSRRTTKTAAAWAMAYBARTYVMYWAAWMCTMTTA Direction: Forward Position #: 16 Overlap #: 19 Alignment: GSRRTTKTAAAWAMACYAATTYCCAAWTACWAYTA ---------------TGAGKCAATTAAACCTCTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 233 Combined Motif Original Motif Original Motif GSRRTTKTAAAWAMAYBARTYVMYWAAWMCTMTTA GTTAACTGTAAAACAGCCT GSRRTTKTAAAWAMAKTWAWCTRTAAAACMKCYTA Direction: Forward Position #: 16 Overlap #: 19 Alignment: GSRRTTKTAAAWAMAYBARTYVMYWAAWMCTMTTA ---------------GTTAACTGTAAAACAGCCT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 85 Combined Motif Original Motif Original Motif GSRRTTKTAAAWAMAKTWAWCTRTAAAACMKCYTA CTAGACATAAAGGTTCTCCA GSRRTTKTAAAWAMACTARACADWAARRYWBYCYA Direction: Forward Position #: 16 Overlap #: 20 Alignment: GSRRTTKTAAAWAMAKTWAWCTRTAAAACMKCYTA ---------------CTAGACATAAAGGTTCTCCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 54 Combined Motif Reverse Complement Reverse Complement TKGMBWMKMTTWDTGTMTAGTRTWTTTAYAAKMSC TTTCTTTTCCTT TKGMBWMKMTTWDTGTYTMKTKTHYTTAYAAKMSC Direction: Forward Position #: 16 Overlap #: 12 Alignment: TKGMBWMKMTTWDTGTMTAGTRTWTTTAYAAKMSC ---------------TTTCTTTTCCTT-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 275 Combined Motif Original Motif Reverse Complement TKGMBWMKMTTWDTGTYTMKTKTHYTTAYAAKMSC TTTAACTCTGTGAG TKGMBWMKMTTWDTGTTTADYTYTBTKASAAKMSC Direction: Forward Position #: 16 Overlap #: 14 Alignment: TKGMBWMKMTTWDTGTYTMKTKTHYTTAYAAKMSC ---------------TTTAACTCTGTGAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 119 Combined Motif Reverse Complement Reverse Complement GSRRTTSTYABAKAKDTAAACADWAARRYWBYCYA KKCACCTTGATCTTGGACTT GSRRTTSTYABAKAKKKMAMCWTDAWVTTKGWCTW Direction: Forward Position #: 16 Overlap #: 20 Alignment: GSRRTTSTYABAKAKDTAAACADWAARRYWBYCYA ---------------KKCACCTTGATCTTGGACTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 99 Combined Motif Original Motif Original Motif GSRRTTSTYABAKAKKKMAMCWTDAWVTTKGWCTW GCAAAKGACATGATYTCATT GSRRTTSTYABAKAKGYAAABKWBAWGATBKHMTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: GSRRTTSTYABAKAKKKMAMCWTDAWVTTKGWCTW ---------------GCAAAKGACATGATYTCATT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 346 Combined Motif Original Motif Original Motif GSRRTTSTYABAKAKGYAAABKWBAWGATBKHMTT AAATCTTAAAGCTC GSRRTTSTYABAKAKRMAWMTTAAAGCTYBKHMTT Direction: Forward Position #: 16 Overlap #: 14 Alignment: GSRRTTSTYABAKAKGYAAABKWBAWGATBKHMTT ---------------AAATCTTAAAGCTC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 262 Combined Motif Reverse Complement Reverse Complement AARDRVKAGCTTTAARWTYKYTYTBTKASAAKMSC GACAGGAGATTAACACTGAG AARDRVKAGCTTTAAGAYAKSWSWTTRACAMTGAS Direction: Forward Position #: 16 Overlap #: 20 Alignment: AARDRVKAGCTTTAARWTYKYTYTBTKASAAKMSC ---------------GACAGGAGATTAACACTGAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 308 Combined Motif Reverse Complement Reverse Complement STCARTGTKAAWSWSYTKTCTTAAAGCTYBKHMTT GTTATTAATTGGCCTAATTT STCARTGTKAAWSWSBTTWYTWADWGSYCTDAHTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: STCARTGTKAAWSWSYTKTCTTAAAGCTYBKHMTT ---------------GTTATTAATTGGCCTAATTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 214 Combined Motif Reverse Complement Original Motif AAHTDAGKSCWDTWAMWAABSWSWTTRACAMTGAS CTCAGGAATGGAAAACC AAHTDAGKSCWDTWACTMAGGARTKKAAMACYGAS Direction: Forward Position #: 16 Overlap #: 17 Alignment: AAHTDAGKSCWDTWAMWAABSWSWTTRACAMTGAS ---------------CTCAGGAATGGAAAACC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 63 Combined Motif Reverse Complement Original Motif STCKGTYTTRYAKTCCTRAGTWADWGSYCTDAHTT AGTGAGAACATRYRRTRTTT STCKGTYTTRYAKTCMKDRRKAACAKGYVDTRTTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: STCKGTYTTRYAKTCCTRAGTWADWGSYCTDAHTT ---------------AGTGAGAACATRYRRTRTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 169 Combined Motif Original Motif Reverse Complement STCKGTYTTRYAKTCMKDRRKAACAKGYVDTRTTT TTTTATAGGATTTGGG STCKGTYTTRYAKTCWTTTATARSATKTGGKRTTT Direction: Forward Position #: 16 Overlap #: 16 Alignment: STCKGTYTTRYAKTCMKDRRKAACAKGYVDTRTTT ---------------TTTTATAGGATTTGGG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 336 Combined Motif Original Motif Reverse Complement STCKGTYTTRYAKTCWTTTATARSATKTGGKRTTT CAGGTGGTKTTTGGTTACAT STCKGTYTTRYAKTCCWKKWKRTDWTTKGKTAYWT Direction: Forward Position #: 16 Overlap #: 20 Alignment: STCKGTYTTRYAKTCWTTTATARSATKTGGKRTTT ---------------CAGGTGGTKTTTGGTTACAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 333 Combined Motif Original Motif Original Motif STCKGTYTTRYAKTCCWKKWKRTDWTTKGKTAYWT TAGATAATAGCTCCAGCTTT STCKGTYTTRYAKTCTAGRTRATAKYTCSWKMYTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: STCKGTYTTRYAKTCCWKKWKRTDWTTKGKTAYWT ---------------TAGATAATAGCTCCAGCTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 55 Combined Motif Original Motif Original Motif STCKGTYTTRYAKTCTAGRTRATAKYTCSWKMYTT ATGGAATAYTATTCAGCCAT STCKGTYTTRYAKTCWWGRWAWWHTHTBCAGCCWT Direction: Forward Position #: 16 Overlap #: 20 Alignment: STCKGTYTTRYAKTCTAGRTRATAKYTCSWKMYTT ---------------ATGGAATAYTATTCAGCCAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 227 Combined Motif Original Motif Original Motif STCKGTYTTRYAKTCWWGRWAWWHTHTBCAGCCWT CCCAAATCTCATSTTGAAT STCKGTYTTRYAKTCHYSAAATMTYATBYWGMMWT Direction: Forward Position #: 16 Overlap #: 19 Alignment: STCKGTYTTRYAKTCWWGRWAWWHTHTBCAGCCWT ---------------CCCAAATCTCATSTTGAAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 363 Combined Motif Original Motif Reverse Complement STCKGTYTTRYAKTCHYSAAATMTYATBYWGMMWT WACAATCAGACCTTG STCKGTYTTRYAKTCWMCAAWYAKAMYTTKGMMWT Direction: Forward Position #: 16 Overlap #: 15 Alignment: STCKGTYTTRYAKTCHYSAAATMTYATBYWGMMWT ---------------WACAATCAGACCTTG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 321 Combined Motif Original Motif Reverse Complement STCKGTYTTRYAKTCWMCAAWYAKAMYTTKGMMWT GCTCCACCCAGTTCGAGCTT STCKGTYTTRYAKTCDCYMMACMSAVTTYGRRCTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: STCKGTYTTRYAKTCWMCAAWYAKAMYTTKGMMWT ---------------GCTCCACCCAGTTCGAGCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 14 Combined Motif Original Motif Reverse Complement STCKGTYTTRYAKTCDCYMMACMSAVTTYGRRCTT AGTGACCCGATTTTCCAGGT STCKGTYTTRYAKTCASTGAMCCGATTTTSMASKT Direction: Forward Position #: 16 Overlap #: 20 Alignment: STCKGTYTTRYAKTCDCYMMACMSAVTTYGRRCTT ---------------AGTGACCCGATTTTCCAGGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 86 Combined Motif Reverse Complement Reverse Complement AYSTRSAAAATCGGRTCASTGARTKKAAMACYGAS VMATTTAKTGAGCACCTACT AYSTRSAAAATCGGRHMABTKADTGDRMAMCTVMK Direction: Forward Position #: 16 Overlap #: 20 Alignment: AYSTRSAAAATCGGRTCASTGARTKKAAMACYGAS ---------------VMATTTAKTGAGCACCTACT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 65 Combined Motif Original Motif Original Motif AYSTRSAAAATCGGRHMABTKADTGDRMAMCTVMK AGAAATCGAGCRCAGCGCCG AYSTRSAAAATCGGRAGAAWTMGWGHRCARCDCCK Direction: Forward Position #: 16 Overlap #: 20 Alignment: AYSTRSAAAATCGGRHMABTKADTGDRMAMCTVMK ---------------AGAAATCGAGCRCAGCGCCG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 18 Combined Motif Reverse Complement Original Motif YGGHGMTGMDCWCRAWTTCTMCCGATTTTSMASKT GAAAAGCGCAGTATTMGGG YGGHGMTGMDCWCRAGAWMWSCSCAKTWTTMRGGT Direction: Forward Position #: 16 Overlap #: 19 Alignment: YGGHGMTGMDCWCRAWTTCTMCCGATTTTSMASKT ---------------GAAAAGCGCAGTATTMGGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 211 Combined Motif Original Motif Original Motif YGGHGMTGMDCWCRAGAWMWSCSCAKTWTTMRGGT GACTTCAAGAATGAAGCCG YGGHGMTGMDCWCRAGACWTCMRSARTGWWGSSGT Direction: Forward Position #: 16 Overlap #: 19 Alignment: YGGHGMTGMDCWCRAGAWMWSCSCAKTWTTMRGGT ---------------GACTTCAAGAATGAAGCCG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 282 Combined Motif Reverse Complement Original Motif ACSSCWWCAKTSKYGAWGTCTMGWGHRCARCDCCK GTCTCTACTAAAA ACSSCWWCAKTSKYGRTBTCTASWRAAMARCDCCK Direction: Forward Position #: 16 Overlap #: 13 Alignment: ACSSCWWCAKTSKYGAWGTCTMGWGHRCARCDCCK ---------------GTCTCTACTAAAA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 176 Combined Motif Reverse Complement Reverse Complement YGGHGMTYTTMWSTAGABAKCMRSARTGWWGSSGT AACAACASACACTGGGGCCT YGGHGMTYTTMWSTARACAWCAVRMAYKDGGGCST Direction: Forward Position #: 16 Overlap #: 20 Alignment: YGGHGMTYTTMWSTAGABAKCMRSARTGWWGSSGT ---------------AACAACASACACTGGGGCCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 202 Combined Motif Original Motif Reverse Complement YGGHGMTYTTMWSTARACAWCAVRMAYKDGGGCST GAAACTGCTTTGTGATGTGT YGGHGMTYTTMWSTAGAMAHYRCDHWBTGAKGTGT Direction: Forward Position #: 16 Overlap #: 20 Alignment: YGGHGMTYTTMWSTARACAWCAVRMAYKDGGGCST ---------------GAAACTGCTTTGTGATGTGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 83 Combined Motif Reverse Complement Reverse Complement ACACRTCABWHDGMMDTYTCTASWRAAMARCDCCK GTKTMTATMTACCACATTTT ACACRTCABWHDGMMGTKTMTAYWDAMMACMTYYT Direction: Forward Position #: 16 Overlap #: 20 Alignment: ACACRTCABWHDGMMDTYTCTASWRAAMARCDCCK ---------------GTKTMTATMTACCACATTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 353 Combined Motif Original Motif Reverse Complement ACACRTCABWHDGMMGTKTMTAYWDAMMACMTYYT GCTTCCATGTG ACACRTCABWHDGMMGYTTCYATDTRMMACMTYYT Direction: Forward Position #: 16 Overlap #: 11 Alignment: ACACRTCABWHDGMMGTKTMTAYWDAMMACMTYYT ---------------GCTTCCATGTG--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 57 Combined Motif Reverse Complement Original Motif AMMAYGTRRMAHATKGAAKCYRCDHWBTGAKGTGT AAATATTTATT AMMAYGTRRMAHATKRAATMTDYATTBTGAKGTGT Direction: Forward Position #: 16 Overlap #: 11 Alignment: AMMAYGTRRMAHATKGAAKCYRCDHWBTGAKGTGT ---------------AAATATTTATT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 173 Combined Motif Original Motif Original Motif AMMAYGTRRMAHATKRAATMTDYATTBTGAKGTGT AAGGAAACAA AMMAYGTRRMAHATKAARKAWAYAATBTGAKGTGT Direction: Forward Position #: 16 Overlap #: 10 Alignment: AMMAYGTRRMAHATKRAATMTDYATTBTGAKGTGT ---------------AAGGAAACAA---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 327 Combined Motif Reverse Complement Reverse Complement ACACRTCABATTKTWTYMTTYATDTRMMACMTYYT GAAATTGACTTCCTCCT ACACRTCABATTKTWKAAWTTRWCTTCCWCCTYYT Direction: Forward Position #: 16 Overlap #: 17 Alignment: ACACRTCABATTKTWTYMTTYATDTRMMACMTYYT ---------------GAAATTGACTTCCTCCT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 127 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 127 Motif 46 Original Motif Original Motif CCCCAACCCC CCCCWCCCCCA CCCCWMCCCCA Direction: Forward Position #: 1 Overlap #: 10 Alignment: CCCCAACCCC- CCCCWCCCCCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 92 Original Motif Original Motif CCCCWMCCCCA GGGGGCTGACCCCCCCACC GGGGSCYSACCCCCMCACC Direction: Forward Position #: 5 Overlap #: 11 Alignment: ----CCCCWMCCCCA---- GGGGGCTGACCCCCCCACC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 309 Reverse Complement Original Motif GGTGRGGGGGTSKGSCCCC CATTCTGGGGTCTGGAGGAY CATTCTGGGGTSTGGRGGWYKGSCCCC Direction: Forward Position #: 9 Overlap #: 12 Alignment: --------GGTGRGGGGGTSKGSCCCC CATTCTGGGGTCTGGAGGAY------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 259 Combined Motif Reverse Complement Original Motif GGGGSCYKWCCKCCASACCCCAGAATG CCCACACCCTTATTA GGGGSCYKWCCBCCACACCCYWRWWWG Direction: Forward Position #: 12 Overlap #: 15 Alignment: GGGGSCYKWCCKCCASACCCCAGAATG -----------CCCACACCCTTATTA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 105 Original Motif Original Motif GGGGSCYKWCCBCCACACCCYWRWWWG GCCTCTCCCTCCACACCTCC GSSKSTCCCTCCACMMCWCCCYWRWWWG Direction: Forward Position #: 2 Overlap #: 19 Alignment: -GGGGSCYKWCCBCCACACCCYWRWWWG GCCTCTCCCTCCACACCTCC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 98 Combined Motif Original Motif Reverse Complement GSSKSTCCCTCCACMMCWCCCYWRWWWG CCCACGCCCACCCGGAACT GSSKSTCCCTCCCCCACDCCCWHVHDRRACT Direction: Forward Position #: 13 Overlap #: 16 Alignment: GSSKSTCCCTCCACMMCWCCCYWRWWWG--- ------------CCCACGCCCACCCGGAACT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 288 Combined Motif Original Motif Original Motif GSSKSTCCCTCCCCCACDCCCWHVHDRRACT CCCAAGTCCC GSSKSTCCCTCCCCCMMASYCCCVHDRRACT Direction: Forward Position #: 14 Overlap #: 10 Alignment: GSSKSTCCCTCCCCCACDCCCWHVHDRRACT -------------CCCAAGTCCC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 26 Combined Motif Reverse Complement Reverse Complement AGTKMHDVGGGKSTYRGGGGGAGGGASYSSC TMGGGAGGCTGAGGCAGGAG AGTKMHDVGGGKSTHGGGRGGMKGRGGCVGSAG Direction: Forward Position #: 14 Overlap #: 18 Alignment: AGTKMHDVGGGKSTYRGGGGGAGGGASYSSC-- -------------TMGGGAGGCTGAGGCAGGAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 169 Combined Motif Reverse Complement Original Motif CTSCVGCCMCRRCCKCCCDASYCCCVHDRRACT CCCAAATCCTATAAAA CTSCVGCCMCRRCCYCCMAABCCYMHAARAACT Direction: Forward Position #: 15 Overlap #: 16 Alignment: CTSCVGCCMCRRCCKCCCDASYCCCVHDRRACT --------------CCCAAATCCTATAAAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 358 Combined Motif Reverse Complement Reverse Complement AGTTKTTHYMGGVTTYGGKGGMKGRGGCVGSAG GGGGTGATGGACG AGTTKTTHYMGGVTKKGGTGRTGGACGCVGSAG Direction: Forward Position #: 15 Overlap #: 13 Alignment: AGTTKTTHYMGGVTTYGGKGGMKGRGGCVGSAG --------------GGGGTGATGGACG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 2 Combined Motif Reverse Complement Reverse Complement CTSCVGCGTCCAKCACCYYABCCYMHAARAACT GCCACCAMGCCMKGCTAAT CTSCVGCGTCCAKCRCCACMHCSCCHDRMDAMT Direction: Forward Position #: 15 Overlap #: 19 Alignment: CTSCVGCGTCCAKCACCYYABCCYMHAARAACT --------------GCCACCAMGCCMKGCTAAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 115 Combined Motif Original Motif Original Motif CTSCVGCGTCCAKCRCCACMHCSCCHDRMDAMT ATGATCCAGCAATYCCACTH CTSCVGCGTCCAKCRYSAYCCMGCMATBCHACTH Direction: Forward Position #: 15 Overlap #: 19 Alignment: CTSCVGCGTCCAKCRCCACMHCSCCHDRMDAMT- --------------ATGATCCAGCAATYCCACTH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 221 Combined Motif Reverse Complement Original Motif HAGTDGBATYGCYGGKTSMKGRTGGACGCVGSAG GGGAGGAAGGGGACAC HAGTDGBATYGCYGGGKGAGGAAGGRGRCASSAG Direction: Forward Position #: 16 Overlap #: 16 Alignment: HAGTDGBATYGCYGGKTSMKGRTGGACGCVGSAG ---------------GGGAGGAAGGGGACAC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 78 Combined Motif Original Motif Reverse Complement HAGTDGBATYGCYGGGKGAGGAAGGRGRCASSAG CCGCGGGGCAGGGCTCG HAGTDGBATYGCYGGSBGMGGRRSRGGGCWCGAG Direction: Forward Position #: 16 Overlap #: 17 Alignment: HAGTDGBATYGCYGGGKGAGGAAGGRGRCASSAG ---------------CCGCGGGGCAGGGCTCG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 227 Combined Motif Original Motif Reverse Complement HAGTDGBATYGCYGGSBGMGGRRSRGGGCWCGAG ATTCAASATGAGATTTGGG HAGTDGBATYGCYGGVTKCRRGAYGRGRYTYGRG Direction: Forward Position #: 16 Overlap #: 19 Alignment: HAGTDGBATYGCYGGSBGMGGRRSRGGGCWCGAG ---------------ATTCAASATGAGATTTGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 336 Combined Motif Reverse Complement Original Motif CKCMAMKCKCMTCKKGRABCCMGCMATBCHACTH ATGTAACCAAAYACCACCTG CKCMAMKCKCMTCKKRWRTMACSMAAHACCACYTG Direction: Forward Position #: 16 Overlap #: 19 Alignment: CKCMAMKCKCMTCKKGRABCCMGCMATBCHACTH- ---------------ATGTAACCAAAYACCACCTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 100 Combined Motif Reverse Complement Reverse Complement CAMGTGGTHTTYSGTYAMWKRRGAYGRGRYTYGRG CGCGGCGCTTGCGGGCCAGC CAMGTGGTHTTYSGTYRCDGVGSWTGMGGKYCRGS Direction: Forward Position #: 16 Overlap #: 20 Alignment: CAMGTGGTHTTYSGTYAMWKRRGAYGRGRYTYGRG ---------------CGCGGCGCTTGCGGGCCAGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 286 Combined Motif Reverse Complement Reverse Complement SCKGKYCCRCAWSCVCHGMKACSMAAHACCACYTG CTCCCAGCCGCCTG SCYKSCCMGCMGCCDSHGMKACSMAAHACCACYTG Direction: Forward Position #: 3 Overlap #: 14 Alignment: SCKGKYCCRCAWSCVCHGMKACSMAAHACCACYTG --CTCCCAGCCGCCTG------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 107 Combined Motif Original Motif Original Motif SCYKSCCMGCMGCCDSHGMKACSMAAHACCACYTG GAGCCACYGCRCC SCYKSCCMGCMGCCDGAGCSACCRMACMCCACYTG Direction: Forward Position #: 16 Overlap #: 13 Alignment: SCYKSCCMGCMGCCDSHGMKACSMAAHACCACYTG ---------------GAGCCACYGCRCC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 111 Combined Motif Reverse Complement Reverse Complement CAMGTGGRGTRMGGTSGCTCDGGCRGCYGGSRKGS KGGGCDGAGGGGCTCCT CAMGTGGRGTRMGGTKGSKCDGRBGGSCKSCWKGS Direction: Forward Position #: 16 Overlap #: 17 Alignment: CAMGTGGRGTRMGGTSGCTCDGGCRGCYGGSRKGS ---------------KGGGCDGAGGGGCTCCT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 5 Combined Motif Original Motif Reverse Complement CAMGTGGRGTRMGGTKGSKCDGRBGGSCKSCWKGS GGAGGCKGAGG CAMGTGGRGTRMGGTGGAGSCGRAGGSCKSCWKGS Direction: Forward Position #: 16 Overlap #: 11 Alignment: CAMGTGGRGTRMGGTKGSKCDGRBGGSCKSCWKGS ---------------GGAGGCKGAGG--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 56 Combined Motif Original Motif Original Motif CAMGTGGRGTRMGGTGGAGSCGRAGGSCKSCWKGS CRTGAGCCACYGYRCCYGGC CAMGTGGRGTRMGGTSGWGVGSSASBGCKCCHGGC Direction: Forward Position #: 16 Overlap #: 20 Alignment: CAMGTGGRGTRMGGTGGAGSCGRAGGSCKSCWKGS ---------------CRTGAGCCACYGYRCCYGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 312 Combined Motif Reverse Complement Reverse Complement GCCHGGYGCBSTSSCBCWCSACCRMACMCCACYTG CCCMKGGCACCCTCAGTCCT GCCHGGYGCBSTSSCCCCMKRSCACMCYCMRYCYK Direction: Forward Position #: 16 Overlap #: 20 Alignment: GCCHGGYGCBSTSSCBCWCSACCRMACMCCACYTG ---------------CCCMKGGCACCCTCAGTCCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 301 Combined Motif Original Motif Original Motif GCCHGGYGCBSTSSCCCCMKRSCACMCYCMRYCYK CCAAGACYCCAGAC GCCHGGYGCBSTSSCCCAAGACYMCASACMRYCYK Direction: Forward Position #: 16 Overlap #: 14 Alignment: GCCHGGYGCBSTSSCCCCMKRSCACMCYCMRYCYK ---------------CCAAGACYCCAGAC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 198 Combined Motif Original Motif Reverse Complement GCCHGGYGCBSTSSCCCAAGACYMCASACMRYCYK TCCCTRCCCT GCCHGGYGCBSTSSCYCCMKRCCCYASACMRYCYK Direction: Forward Position #: 16 Overlap #: 10 Alignment: GCCHGGYGCBSTSSCCCAAGACYMCASACMRYCYK ---------------TCCCTRCCCT---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 178 Combined Motif Original Motif Original Motif GCCHGGYGCBSTSSCYCCMKRCCCYASACMRYCYK ACTGTCTTCCACCTCCACAT GCCHGGYGCBSTSSCHCYSTCYYCCACMYCVWCMT Direction: Forward Position #: 16 Overlap #: 20 Alignment: GCCHGGYGCBSTSSCYCCMKRCCCYASACMRYCYK ---------------ACTGTCTTCCACCTCCACAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 161 Combined Motif Original Motif Reverse Complement GCCHGGYGCBSTSSCHCYSTCYYCCACMYCVWCMT VCCDCCTCCKCCTCCTC GCCHGGYGCBSTSSCHCHBYCTYCBMCYCCBCCMT Direction: Forward Position #: 16 Overlap #: 17 Alignment: GCCHGGYGCBSTSSCHCYSTCYYCCACMYCVWCMT ---------------VCCDCCTCCKCCTCCTC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 1 Combined Motif Reverse Complement Original Motif AYGGVGGMGYVGKAGKBDGHGSSASBGCKCCHGGC GGGGTGACAGABGB AYGGVGGMGYVGKAGGGGGTGVCAGVBBDCCHGGC Direction: Forward Position #: 16 Overlap #: 14 Alignment: AYGGVGGMGYVGKAGKBDGHGSSASBGCKCCHGGC ---------------GGGGTGACAGABGB------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 283 Combined Motif Reverse Complement Original Motif GCCHGGHBBBCTGBCACCCCCTYCBMCYCCBCCMT GCCCTCACCATCC GCCHGGHBBBCTGBCRCCCYCWCCAWCYCCBCCMT Direction: Forward Position #: 16 Overlap #: 13 Alignment: GCCHGGHBBBCTGBCACCCCCTYCBMCYCCBCCMT ---------------GCCCTCACCATCC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 59 Combined Motif Reverse Complement Reverse Complement AYGGVGGKGWTGGWGMGGGMGVCAGVBBDCCHGGC CKCGTCSGGGAGG AYGGVGGKGWTGGWGCKSGTSVSRGAGGDCCHGGC Direction: Forward Position #: 16 Overlap #: 13 Alignment: AYGGVGGKGWTGGWGMGGGMGVCAGVBBDCCHGGC ---------------CKCGTCSGGGAGG------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 155 Combined Motif Original Motif Original Motif AYGGVGGKGWTGGWGCKSGTSVSRGAGGDCCHGGC TCCCTCCCGGACGGGGYGGC AYGGVGGKGWTGGWGYSCSTCCSGGASGGSSYGGC Direction: Forward Position #: 16 Overlap #: 20 Alignment: AYGGVGGKGWTGGWGCKSGTSVSRGAGGDCCHGGC ---------------TCCCTCCCGGACGGGGYGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 39 Combined Motif Reverse Complement Reverse Complement GCCKSSCCSTCCSGGASGSMCWCCAWCYCCBCCMT CCTCCCAGCCGCCT GCCKSSCCSTCCSGGMCKCCCASCMKCCYCBCCMT Direction: Forward Position #: 16 Overlap #: 14 Alignment: GCCKSSCCSTCCSGGASGSMCWCCAWCYCCBCCMT ---------------CCTCCCAGCCGCCT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 182 Combined Motif Reverse Complement Reverse Complement AYGGVGMGGYRGSTGGGRGRCCSGGASGGSSYGGC TGGGTTCYTGGTC AYGGVGMGGYRGSTGKGGGKYCYKGRTSGSSYGGC Direction: Forward Position #: 16 Overlap #: 13 Alignment: AYGGVGMGGYRGSTGGGRGRCCSGGASGGSSYGGC ---------------TGGGTTCYTGGTC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 250 Combined Motif Original Motif Reverse Complement AYGGVGMGGYRGSTGKGGGKYCYKGRTSGSSYGGC GGAGCGGTGG AYGGVGMGGYRGSTGGGRGBKSTGGRTSGSSYGGC Direction: Forward Position #: 16 Overlap #: 10 Alignment: AYGGVGMGGYRGSTGKGGGKYCYKGRTSGSSYGGC ---------------GGAGCGGTGG---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 277 Combined Motif Reverse Complement Original Motif GCCKSSCSAMCCASYBCKCCCASCMKCCYCBCCMT GCCCTCACCAGAAGC GCCKSSCSAMCCASYGCYCTCACCAGMMKCBCCMT Direction: Forward Position #: 16 Overlap #: 15 Alignment: GCCKSSCSAMCCASYBCKCCCASCMKCCYCBCCMT ---------------GCCCTCACCAGAAGC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 271 Combined Motif Reverse Complement Original Motif AYGGVGYRYCTGGTGAGKGCKSTGGRTSGSSYGGC AGGGATCTAGGTTGCR AYGGVGYRYCTGGTGAGGGMTCTRGGTYGSVYGGC Direction: Forward Position #: 16 Overlap #: 16 Alignment: AYGGVGYRYCTGGTGAGKGCKSTGGRTSGSSYGGC ---------------AGGGATCTAGGTTGCR---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 6 Combined Motif Reverse Complement Original Motif GCCKVSCMACCKAGAYCCCTCACCAGMMKCBCCMT GCTCACTGCAASCTC GCCKVSCMACCKAGABCYCWCWSCARVCDCBCCMT Direction: Forward Position #: 16 Overlap #: 15 Alignment: GCCKVSCMACCKAGAYCCCTCACCAGMMKCBCCMT ---------------GCTCACTGCAASCTC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 136 Combined Motif Reverse Complement Original Motif AYGGVGDGVKTGSWGWGMGBTCTRGGTYGSVYGGC CCCTCACTGCCCGGGG AYGGVGDGVKTGSWGCSCKCWCTGSSYKGGGYGGC Direction: Forward Position #: 16 Overlap #: 16 Alignment: AYGGVGDGVKTGSWGWGMGBTCTRGGTYGSVYGGC ---------------CCCTCACTGCCCGGGG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 53 Combined Motif Original Motif Original Motif AYGGVGDGVKTGSWGCSCKCWCTGSSYKGGGYGGC GTCCCATCGACCACCCAAG AYGGVGDGVKTGSWGSYCYCAYYGMCCRSSSARGC Direction: Forward Position #: 16 Overlap #: 19 Alignment: AYGGVGDGVKTGSWGCSCKCWCTGSSYKGGGYGGC ---------------GTCCCATCGACCACCCAAG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 18 Combined Motif Reverse Complement Original Motif GCKTSSSKGGYCMMTGKGMSCWSCARVCDCBCCMT GAAAAGCGCAGTATTMGGG GCKTSSSKGGYCMMTGRRAASYGCARTMTYHSSGT Direction: Forward Position #: 16 Overlap #: 19 Alignment: GCKTSSSKGGYCMMTGKGMSCWSCARVCDCBCCMT ---------------GAAAAGCGCAGTATTMGGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 84 Combined Motif Reverse Complement Original Motif ACSSDMAYAMTGCKSTTKKCAYYGMCCRSSSARGC CTGGGTCCCCCAGCAGTGCC ACSSDMAYAMTGCKSCTGGSWCCSCCMGCMGTGSC Direction: Forward Position #: 16 Overlap #: 20 Alignment: ACSSDMAYAMTGCKSTTKKCAYYGMCCRSSSARGC ---------------CTGGGTCCCCCAGCAGTGCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 108 Combined Motif Original Motif Original Motif ACSSDMAYAMTGCKSCTGGSWCCSCCMGCMGTGSC CGAGCCTCCCCGAYGAGCGC ACSSDMAYAMTGCKSCKRGCYYCCCCVRCRRKSGC Direction: Forward Position #: 16 Overlap #: 20 Alignment: ACSSDMAYAMTGCKSCTGGSWCCSCCMGCMGTGSC ---------------CGAGCCTCCCCGAYGAGCGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 165 Combined Motif Original Motif Reverse Complement ACSSDMAYAMTGCKSCKRGCYYCCCCVRCRRKSGC AGCTCMKCCTCCTGTCAGAT ACSSDMAYAMTGCKSMGVKCMKCCYCCWSDCAGRY Direction: Forward Position #: 16 Overlap #: 20 Alignment: ACSSDMAYAMTGCKSCKRGCYYCCCCVRCRRKSGC ---------------AGCTCMKCCTCCTGTCAGAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 201 Combined Motif Original Motif Original Motif ACSSDMAYAMTGCKSMGVKCMKCCYCCWSDCAGRY GTAACACTCACCGCGARGGT ACSSDMAYAMTGCKSRKAWCACYCACCDSGARGGT Direction: Forward Position #: 16 Overlap #: 20 Alignment: ACSSDMAYAMTGCKSMGVKCMKCCYCCWSDCAGRY ---------------GTAACACTCACCGCGARGGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 234 Combined Motif Reverse Complement Reverse Complement ACCKTCSHGGTGMGTGWTRMSYGCARTMTYHSSGT GTGTCKGGAGTTTGTTCCTT ACCKTCSHGGTGMGTGTKWCKBGMRKTWKTTCCKT Direction: Forward Position #: 16 Overlap #: 20 Alignment: ACCKTCSHGGTGMGTGWTRMSYGCARTMTYHSSGT ---------------GTGTCKGGAGTTTGTTCCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 138 Combined Motif Original Motif Reverse Complement ACCKTCSHGGTGMGTGTKWCKBGMRKTWKTTCCKT GGSKGATCTGGCTG ACCKTCSHGGTGMGTGKGKSATSHGGYTGTTCCKT Direction: Forward Position #: 16 Overlap #: 14 Alignment: ACCKTCSHGGTGMGTGTKWCKBGMRKTWKTTCCKT ---------------GGSKGATCTGGCTG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 60 Combined Motif Reverse Complement Reverse Complement ARGGAACAKCCHSATSRCYCACYCACCDSGARGGT CTCCTGACCTCGTGATC ARGGAACAKCCHSATCTCCYRMCCTCSTGAWMGGT Direction: Forward Position #: 16 Overlap #: 17 Alignment: ARGGAACAKCCHSATSRCYCACYCACCDSGARGGT ---------------CTCCTGACCTCGTGATC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 321 Combined Motif Original Motif Reverse Complement ARGGAACAKCCHSATCTCCYRMCCTCSTGAWMGGT GCTCCACCCAGTTCGAGCTT ARGGAACAKCCHSATSYYCCACCCWSTTSRAGSKT Direction: Forward Position #: 16 Overlap #: 20 Alignment: ARGGAACAKCCHSATCTCCYRMCCTCSTGAWMGGT ---------------GCTCCACCCAGTTCGAGCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 160 Combined Motif Original Motif Original Motif ARGGAACAKCCHSATSYYCCACCCWSTTSRAGSKT AAATTACCCAGTCTCAGGTA ARGGAACAKCCHSATRAHYYACCCAGTYTVAGGTW Direction: Forward Position #: 16 Overlap #: 20 Alignment: ARGGAACAKCCHSATSYYCCACCCWSTTSRAGSKT ---------------AAATTACCCAGTCTCAGGTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 267 Combined Motif Original Motif Reverse Complement ARGGAACAKCCHSATRAHYYACCCAGTYTVAGGTW TCTCAAGTCCAT ARGGAACAKCCHSATDCTCWASYCMRTYTVAGGTW Direction: Forward Position #: 16 Overlap #: 12 Alignment: ARGGAACAKCCHSATRAHYYACCCAGTYTVAGGTW ---------------TCTCAAGTCCAT-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 250 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 250 Motif 107 Reverse Complement Reverse Complement GGAGCGGTGG GGMGCKGTGGCTC GGAGCGGTGGCTC Direction: Forward Position #: 1 Overlap #: 10 Alignment: GGAGCGGTGG--- GGMGCKGTGGCTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 56 Reverse Complement Reverse Complement GAGCCACCGCTCC GCCKGGMKCMGTGGCTCAKG GCCKGGAGCCRYSGCTCMKG Direction: Forward Position #: 6 Overlap #: 13 Alignment: -----GAGCCACCGCTCC-- GCCKGGMKCMGTGGCTCAKG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 105 Combined Motif Reverse Complement Original Motif CRYGAGCSKKGGCTCCYGGC GCCTCTCCCTCCACACCTCC CRYGAGCSGBSKCTCCCKSCACACCTCC Direction: Forward Position #: 9 Overlap #: 12 Alignment: CRYGAGCSKKGGCTCCYGGC-------- --------GCCTCTCCCTCCACACCTCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 2 Combined Motif Original Motif Reverse Complement CRYGAGCSGBSKCTCCCKSCACACCTCC GCCACCAMGCCMKGCTAAT CRYGAGCSGBSKSYCMCBMCRCMCSKCYAAT Direction: Forward Position #: 13 Overlap #: 16 Alignment: CRYGAGCSGBSKCTCCCKSCACACCTCC--- ------------GCCACCAMGCCMKGCTAAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 331 Reverse Complement Reverse Complement ATTKGRSGYGKGYBGYGKSRSBCSGCTCMKG GCCTCCTTGAGCTGTGGTGG GMYTSSDTGHGBKGKGBKGGRSBCSGCTCMKG Direction: Forward Position #: 2 Overlap #: 19 Alignment: -ATTKGRSGYGKGYBGYGKSRSBCSGCTCMKG GCCTCCTTGAGCTGTGGTGG------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 291 Combined Motif Reverse Complement Original Motif CRYGAGCSGBSKCCRBCRCRBCHCADSSAKRC CTGAGGACCTGAGGTCRTA CRYGAGCSGBSKCCCTSASGACCYRAGGWBRYA Direction: Forward Position #: 15 Overlap #: 18 Alignment: CRYGAGCSGBSKCCRBCRCRBCHCADSSAKRC- --------------CTGAGGACCTGAGGTCRTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 263 Combined Motif Original Motif Reverse Complement CRYGAGCSGBSKCCCTSASGACCYRAGGWBRYA GGCAGAGCTGGG CRYGAGCSGBSKCCSKCAGRGCYBGRGGWBRYA Direction: Forward Position #: 15 Overlap #: 12 Alignment: CRYGAGCSGBSKCCCTSASGACCYRAGGWBRYA --------------GGCAGAGCTGGG------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 3 Combined Motif Original Motif Original Motif CRYGAGCSGBSKCCSKCAGRGCYBGRGGWBRYA GCTGGAGTGCAGTGGCRYGA CRYGAGCSGBSKCCGSYRGAGYKCRGKGDCRYRA Direction: Forward Position #: 15 Overlap #: 19 Alignment: CRYGAGCSGBSKCCSKCAGRGCYBGRGGWBRYA- --------------GCTGGAGTGCAGTGGCRYGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 307 Combined Motif Original Motif Reverse Complement CRYGAGCSGBSKCCGSYRGAGYKCRGKGDCRYRA AGAGCTCTGGCTGGCATCT CRYGAGCSGBSKCCGMKAGMKCKSGSTGGCATMW Direction: Forward Position #: 16 Overlap #: 19 Alignment: CRYGAGCSGBSKCCGSYRGAGYKCRGKGDCRYRA ---------------AGAGCTCTGGCTGGCATCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 341 Combined Motif Reverse Complement Original Motif WRATGCCASCSRGRRCTYYCGGRSBCSGCTCMKG ATCCATCCATCCATCCA WRATGCCASCSRGRRMTCYMKSVATCCRYYCAKG Direction: Forward Position #: 16 Overlap #: 17 Alignment: WRATGCCASCSRGRRCTYYCGGRSBCSGCTCMKG ---------------ATCCATCCATCCATCCA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 101 Combined Motif Original Motif Original Motif WRATGCCASCSRGRRMTCYMKSVATCCRYYCAKG CGCCGCCGCCGC WRATGCCASCSRGRRCKCCGYCGCYSCRYYCAKG Direction: Forward Position #: 16 Overlap #: 12 Alignment: WRATGCCASCSRGRRMTCYMKSVATCCRYYCAKG ---------------CGCCGCCGCCGC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 178 Combined Motif Original Motif Original Motif WRATGCCASCSRGRRCKCCGYCGCYSCRYYCAKG ACTGTCTTCCACCTCCACAT WRATGCCASCSRGRRMSYSDCYKCCVCVTCCAYRT Direction: Forward Position #: 16 Overlap #: 19 Alignment: WRATGCCASCSRGRRCKCCGYCGCYSCRYYCAKG- ---------------ACTGTCTTCCACCTCCACAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 62 Combined Motif Reverse Complement Reverse Complement AMKTGGAVGBGGRMGDSMSYMKCKSGSTGGCATMW GTAGACKGGAGCTGTTCCT AMKTGGAVGBGGRMGGTAGWCKSGRGCTGKYMYTW Direction: Forward Position #: 16 Overlap #: 19 Alignment: AMKTGGAVGBGGRMGDSMSYMKCKSGSTGGCATMW ---------------GTAGACKGGAGCTGTTCCT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 92 Combined Motif Reverse Complement Original Motif WAKRMRCAGCKCSRGWCTACCYKCCVCVTCCAYRT GGGGGCTGACCCCCCCACC WAKRMRCAGCKCSRGGSKGSCTGMCCCCYCCACVT Direction: Forward Position #: 16 Overlap #: 19 Alignment: WAKRMRCAGCKCSRGWCTACCYKCCVCVTCCAYRT ---------------GGGGGCTGACCCCCCCACC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 358 Combined Motif Original Motif Original Motif WAKRMRCAGCKCSRGGSKGSCTGMCCCCYCCACVT CGTCCATCACCCC WAKRMRCAGCKCSRGCGTSCMTSACCCCYCCACVT Direction: Forward Position #: 16 Overlap #: 13 Alignment: WAKRMRCAGCKCSRGGSKGSCTGMCCCCYCCACVT ---------------CGTCCATCACCCC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 89 Combined Motif Reverse Complement Original Motif AVGTGGKGGGGTSAYGSACGCKSGRGCTGKYMYTW GGCTGCGGAGGGTGTA AVGTGGKGGGGTSAYGGMYGCGGRGGSTGTHMYTW Direction: Forward Position #: 16 Overlap #: 16 Alignment: AVGTGGKGGGGTSAYGSACGCKSGRGCTGKYMYTW ---------------GGCTGCGGAGGGTGTA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 311 Combined Motif Original Motif Original Motif AVGTGGKGGGGTSAYGGMYGCGGRGGSTGTHMYTW GGCATCACGGATCCTACCAA AVGTGGKGGGGTSAYGGCWKCRSRGRBYSTACCDA Direction: Forward Position #: 16 Overlap #: 20 Alignment: AVGTGGKGGGGTSAYGGMYGCGGRGGSTGTHMYTW ---------------GGCATCACGGATCCTACCAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 215 Combined Motif Original Motif Reverse Complement AVGTGGKGGGGTSAYGGCWKCRSRGRBYSTACCDA GGGRSCACAGGAGCD AVGTGGKGGGGTSAYGGSAKCACRGGASCKACCDA Direction: Forward Position #: 16 Overlap #: 15 Alignment: AVGTGGKGGGGTSAYGGCWKCRSRGRBYSTACCDA ---------------GGGRSCACAGGAGCD----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 301 Combined Motif Original Motif Reverse Complement AVGTGGKGGGGTSAYGGSAKCACRGGASCKACCDA GTCTGGMGTCTTGG AVGTGGKGGGGTSAYGKCTGSASTSKWGSKACCDA Direction: Forward Position #: 16 Overlap #: 14 Alignment: AVGTGGKGGGGTSAYGGSAKCACRGGASCKACCDA ---------------GTCTGGMGTCTTGG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 164 Combined Motif Reverse Complement Original Motif TDGGTRSCWRSASTSCAGRCMTSACCCCYCCACVT AGCCCCGGTTCCCGCYCGC TDGGTRSCWRSASTSMRSVCMKGWYCCCBCCMSCT Direction: Forward Position #: 16 Overlap #: 19 Alignment: TDGGTRSCWRSASTSCAGRCMTSACCCCYCCACVT ---------------AGCCCCGGTTCCCGCYCGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 220 Combined Motif Original Motif Original Motif TDGGTRSCWRSASTSMRSVCMKGWYCCCBCCMSCT TGCACTGCACCCAC TDGGTRSCWRSASTSTGCACTGSAYCCMCCCMSCT Direction: Forward Position #: 16 Overlap #: 14 Alignment: TDGGTRSCWRSASTSMRSVCMKGWYCCCBCCMSCT ---------------TGCACTGCACCCAC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 115 Combined Motif Reverse Complement Original Motif AGSRGGGYGGKTSCAGTGCASASTSKWGSKACCDA ATGATCCAGCAATYCCACTH AGSRGGGYGGKTSCARTGMHCMRKCAAKSYMMCTA Direction: Forward Position #: 16 Overlap #: 20 Alignment: AGSRGGGYGGKTSCAGTGCASASTSKWGSKACCDA ---------------ATGATCCAGCAATYCCACTH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 111 Combined Motif Original Motif Reverse Complement AGSRGGGYGGKTSCARTGMHCMRKCAAKSYMMCTA KGGGCDGAGGGGCTCCT WGGGSGGAGGGKCYCCTGMHCMRKCAAKSYMMCTA Direction: Forward Position #: 1 Overlap #: 17 Alignment: AGSRGGGYGGKTSCARTGMHCMRKCAAKSYMMCTA KGGGCDGAGGGGCTCCT------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 183 Combined Motif Reverse Complement Original Motif TAGYRKSRTTGYKRGHYCAGGMGYCCCTCCSCCCW GCCRGCCCTGCYGGCC TAGYRKSRTTGYKRGGCCAGSCSTSCCDSCCCCCW Direction: Forward Position #: 16 Overlap #: 16 Alignment: TAGYRKSRTTGYKRGHYCAGGMGYCCCTCCSCCCW ---------------GCCRGCCCTGCYGGCC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 312 Combined Motif Original Motif Reverse Complement TAGYRKSRTTGYKRGGCCAGSCSTSCCDSCCCCCW CCCMKGGCACCCTCAGTCCT TAGYRKSRTTGYKRGCCCMGGSCWCCCTCMSYCCT Direction: Forward Position #: 16 Overlap #: 20 Alignment: TAGYRKSRTTGYKRGGCCAGSCSTSCCDSCCCCCW ---------------CCCMKGGCACCCTCAGTCCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 30 Combined Motif Original Motif Original Motif TAGYRKSRTTGYKRGCCCMGGSCWCCCTCMSYCCT AGGAGCGCCTCTKCCCGGC TAGYRKSRTTGYKRGMSSAGSGCCYCYKCCCBSCT Direction: Forward Position #: 16 Overlap #: 19 Alignment: TAGYRKSRTTGYKRGCCCMGGSCWCCCTCMSYCCT ---------------AGGAGCGCCTCTKCCCGGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 266 Combined Motif Original Motif Reverse Complement TAGYRKSRTTGYKRGMSSAGSGCCYCYKCCCBSCT TGCTGCTGCTGC TAGYRKSRTTGYKRGHGCWGCKSCTSCKCCCBSCT Direction: Forward Position #: 16 Overlap #: 12 Alignment: TAGYRKSRTTGYKRGMSSAGSGCCYCYKCCCBSCT ---------------TGCTGCTGCTGC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 155 Combined Motif Original Motif Reverse Complement TAGYRKSRTTGYKRGHGCWGCKSCTSCKCCCBSCT GCCKCCCCGTCCGGGAGGGA TAGYRKSRTTGYKRGGSCKSCCCSTCCKSSMGGSW Direction: Forward Position #: 16 Overlap #: 20 Alignment: TAGYRKSRTTGYKRGHGCWGCKSCTSCKCCCBSCT ---------------GCCKCCCCGTCCGGGAGGGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 46 Combined Motif Reverse Complement Reverse Complement WSCCYSSYGGASGGGSRGSCCMRKCAAKSYMMCTA TGGGGGWGGGG WSCCYSSYGGASGGGKGGGSSHGGSGAKSYMMCTA Direction: Forward Position #: 16 Overlap #: 11 Alignment: WSCCYSSYGGASGGGSRGSCCMRKCAAKSYMMCTA ---------------TGGGGGWGGGG--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 149 Combined Motif Original Motif Reverse Complement WSCCYSSYGGASGGGKGGGSSHGGSGAKSYMMCTA GGGTGCAGGMGGGCTGAGT WSCCYSSYGGASGGGGGGKGCAGGSGRGCTGASTA Direction: Forward Position #: 16 Overlap #: 19 Alignment: WSCCYSSYGGASGGGKGGGSSHGGSGAKSYMMCTA ---------------GGGTGCAGGMGGGCTGAGT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 247 Combined Motif Original Motif Reverse Complement WSCCYSSYGGASGGGGGGKGCAGGSGRGCTGASTA GKGGCAGTGAGGC WSCSKGGCRGWGRGGSGGKGCAGGSGRGCTGASTA Direction: Forward Position #: 4 Overlap #: 13 Alignment: WSCCYSSYGGASGGGGGGKGCAGGSGRGCTGASTA ---GKGGCAGTGAGGC------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 33 Combined Motif Original Motif Original Motif WSCSKGGCRGWGRGGSGGKGCAGGSGRGCTGASTA ACGCCCACGGAGTCTC WSCSKGGCRGWGRGGMSGYSCASGGRGKCTCASTA Direction: Forward Position #: 16 Overlap #: 16 Alignment: WSCSKGGCRGWGRGGSGGKGCAGGSGRGCTGASTA ---------------ACGCCCACGGAGTCTC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 165 Combined Motif Original Motif Original Motif WSCSKGGCRGWGRGGMSGYSCASGGRGKCTCASTA ATCTGACAGGAGGYRGAGCT WSCSKGGCRGWGRGGATSTGMMAGGAGGCDGAGYW Direction: Forward Position #: 16 Overlap #: 20 Alignment: WSCSKGGCRGWGRGGMSGYSCASGGRGKCTCASTA ---------------ATCTGACAGGAGGYRGAGCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 235 Combined Motif Reverse Complement Reverse Complement WKCTCDGCCTCCTRYCASATCCKCWCKGCCRSGSW GCCAATTTCTCCCATTTGGA WKCTCDGCCTCCTRYSMCAWYYTCTCBSMYWYGGA Direction: Forward Position #: 16 Overlap #: 20 Alignment: WKCTCDGCCTCCTRYCASATCCKCWCKGCCRSGSW ---------------GCCAATTTCTCCCATTTGGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 53 Combined Motif Original Motif Original Motif WKCTCDGCCTCCTRYSMCAWYYTCTCBSMYWYGGA GTCCCATCGACCACCCAAG WKCTCDGCCTCCTRYGYCMCHTYSWCCVCCCWRGA Direction: Forward Position #: 16 Overlap #: 19 Alignment: WKCTCDGCCTCCTRYSMCAWYYTCTCBSMYWYGGA ---------------GTCCCATCGACCACCCAAG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 5 Combined Motif Reverse Complement Reverse Complement TCKWGGGBGGWSKAHGRGMCMMAGGAGGCDGAGYW GGAGGCKGAGG TCKWGGGBGGWSKAHGGRRSCHVRGRGGCDGAGYW Direction: Forward Position #: 16 Overlap #: 11 Alignment: TCKWGGGBGGWSKAHGRGMCMMAGGAGGCDGAGYW ---------------GGAGGCKGAGG--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 65 Combined Motif Original Motif Original Motif TCKWGGGBGGWSKAHGGRRSCHVRGRGGCDGAGYW AGAAATCGAGCRCAGCGCCG TCKWGGGBGGWSKAHRGAARYCGAGVGSMGSRSCK Direction: Forward Position #: 16 Overlap #: 20 Alignment: TCKWGGGBGGWSKAHGGRRSCHVRGRGGCDGAGYW ---------------AGAAATCGAGCRCAGCGCCG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 127 Combined Motif Original Motif Reverse Complement TCKWGGGBGGWSKAHRGAARYCGAGVGSMGSRSCK GGGGTTGGGG TCKWGGGBGGWSKAHGGRRDYBGRGVGSMGSRSCK Direction: Forward Position #: 16 Overlap #: 10 Alignment: TCKWGGGBGGWSKAHRGAARYCGAGVGSMGSRSCK ---------------GGGGTTGGGG---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 201 Combined Motif Reverse Complement Original Motif RGSKSCYSCVCMCBMDMMCCHTYSWCCVCCCWRGA GTAACACTCACCGCGARGGT RGSKSCYSCVCMCBMGYAMCAYTCACCRCSAAGGW Direction: Forward Position #: 16 Overlap #: 20 Alignment: RGSKSCYSCVCMCBMDMMCCHTYSWCCVCCCWRGA ---------------GTAACACTCACCGCGARGGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 221 Combined Motif Original Motif Reverse Complement RGSKSCYSCVCMCBMGYAMCAYTCACCRCSAAGGW GTGTCCCCTTCCTCCC RGSKSCYSCVCMCBMGTRHCMCYYWCCKCCCAGGW Direction: Forward Position #: 16 Overlap #: 16 Alignment: RGSKSCYSCVCMCBMGYAMCAYTCACCRCSAAGGW ---------------GTGTCCCCTTCCTCCC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 171 Combined Motif Original Motif Original Motif RGSKSCYSCVCMCBMGTRHCMCYYWCCKCCCAGGW AAAAGTCCACAGTCCAAAGT RGSKSCYSCVCMCBMRWAASYCCHYMSTCCAARGT Direction: Forward Position #: 16 Overlap #: 20 Alignment: RGSKSCYSCVCMCBMGTRHCMCYYWCCKCCCAGGW ---------------AAAAGTCCACAGTCCAAAGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 203 Combined Motif Original Motif Original Motif RGSKSCYSCVCMCBMRWAASYCCHYMSTCCAARGT CCATGGCGTCC RGSKSCYSCVCMCBMMCAWGBCSTCCSTCCAARGT Direction: Forward Position #: 16 Overlap #: 11 Alignment: RGSKSCYSCVCMCBMRWAASYCCHYMSTCCAARGT ---------------CCATGGCGTCC--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 350 Combined Motif Reverse Complement Original Motif ACKTTGGASGGASGBCWTGRYBGRGVGSMGSRSCK TCTGGAGTGGACCTCCAGCA ACKTTGGASGGASGBYMTGGWGKGGASCWSCAGCA Direction: Forward Position #: 16 Overlap #: 20 Alignment: ACKTTGGASGGASGBCWTGRYBGRGVGSMGSRSCK ---------------TCTGGAGTGGACCTCCAGCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 323 Combined Motif Original Motif Reverse Complement ACKTTGGASGGASGBYMTGGWGKGGASCWSCAGCA TGGACCTGAGAGC ACKTTGGASGGASGBTSKRSCKGRGAGCWSCAGCA Direction: Forward Position #: 16 Overlap #: 13 Alignment: ACKTTGGASGGASGBYMTGGWGKGGASCWSCAGCA ---------------TGGACCTGAGAGC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 47 Combined Motif Original Motif Reverse Complement ACKTTGGASGGASGBTSKRSCKGRGAGCWSCAGCA MGGAAACTGAGGC ACKTTGGASGGASGBHGGAMMCKGRRGCWSCAGCA Direction: Forward Position #: 16 Overlap #: 13 Alignment: ACKTTGGASGGASGBTSKRSCKGRGAGCWSCAGCA ---------------MGGAAACTGAGGC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 227 Combined Motif Original Motif Reverse Complement ACKTTGGASGGASGBHGGAMMCKGRRGCWSCAGCA ATTCAASATGAGATTTGGG ACKTTGGASGGASGBAKKMAASDKGAGMTYYRGSA Direction: Forward Position #: 16 Overlap #: 19 Alignment: ACKTTGGASGGASGBHGGAMMCKGRRGCWSCAGCA ---------------ATTCAASATGAGATTTGGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 285 Combined Motif Original Motif Reverse Complement ACKTTGGASGGASGBAKKMAASDKGAGMTYYRGSA GCTGGAGTGCAGTG ACKTTGGASGGASGBRYTGRAGTGSAGWKYYRGSA Direction: Forward Position #: 16 Overlap #: 14 Alignment: ACKTTGGASGGASGBAKKMAASDKGAGMTYYRGSA ---------------GCTGGAGTGCAGTG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 69 Combined Motif Reverse Complement Original Motif TSCMMMYWCTSCACTMCAKMBCSTCCSTCCAARGT GTAGCTGGGAYTACA TSCMMMYWCTSCACTSYAGCTSGDMCBWCMAARGT Direction: Forward Position #: 16 Overlap #: 15 Alignment: TSCMMMYWCTSCACTMCAKMBCSTCCSTCCAARGT ---------------GTAGCTGGGAYTACA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 96 Combined Motif Original Motif Reverse Complement TSCMMMYWCTSCACTSYAGCTSGDMCBWCMAARGT GGAGCCGGCTCCCTCAGCTT TSCMMMYWCTSCACTGGAGCYGGCTCCMYCARMKT Direction: Forward Position #: 16 Overlap #: 20 Alignment: TSCMMMYWCTSCACTSYAGCTSGDMCBWCMAARGT ---------------GGAGCCGGCTCCCTCAGCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 136 Combined Motif Reverse Complement Original Motif ARRMTGMRGGAGCCKGCTCCAGTGSAGWKYYRGSA CCCTCACTGCCCGGGG ARRMTGMRGGAGCCKSCYTCASTGCMSDGGBRGSA Direction: Forward Position #: 16 Overlap #: 16 Alignment: ARRMTGMRGGAGCCKGCTCCAGTGSAGWKYYRGSA ---------------CCCTCACTGCCCGGGG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 79 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 79 Motif 341 Original Motif Reverse Complement AATGAATGAAT TGGATGGATGGATGGAT TGRATGRATGRATGGAT Direction: Forward Position #: 3 Overlap #: 11 Alignment: --AATGAATGAAT---- TGGATGGATGGATGGAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 211 Original Motif Original Motif TGRATGRATGRATGGAT GACTTCAAGAATGAAGCCG GACTTCAWGAATGAAKSVRTGGAT Direction: Forward Position #: 8 Overlap #: 12 Alignment: -------TGRATGRATGRATGGAT GACTTCAAGAATGAAGCCG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 224 Combined Motif Reverse Complement Reverse Complement ATCCAKVSYTTCATTCWTGAAGTC CAAAGTCTTAACTCATT ATCCAKVSYTYMAWKYHTKAASTCATT Direction: Forward Position #: 11 Overlap #: 14 Alignment: ATCCAKVSYTTCATTCWTGAAGTC--- ----------CAAAGTCTTAACTCATT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 241 Combined Motif Reverse Complement Original Motif AATGASTTRADMYWTRKAKSVRTGGAT GCACTGAGTGAACGA AATGASTTRADGCAYKGAGTGAWSGAT Direction: Forward Position #: 12 Overlap #: 15 Alignment: AATGASTTRADMYWTRKAKSVRTGGAT -----------GCACTGAGTGAACGA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 104 Combined Motif Original Motif Reverse Complement AATGASTTRADGCAYKGAGTGAWSGAT CTCCAGKTMCATCCATGTTG AATGASTTRADVYMCAGAKHSATCSATGTTG Direction: Forward Position #: 12 Overlap #: 16 Alignment: AATGASTTRADGCAYKGAGTGAWSGAT---- -----------CTCCAGKTMCATCCATGTTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 214 Combined Motif Original Motif Reverse Complement AATGASTTRADVYMCAGAKHSATCSATGTTG GGTTTTCCATTCCTGAG AATGASTTRADVYVSTKTTCCATYCMTGWKG Direction: Forward Position #: 14 Overlap #: 17 Alignment: AATGASTTRADVYMCAGAKHSATCSATGTTG -------------GGTTTTCCATTCCTGAG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 189 Combined Motif Original Motif Original Motif AATGASTTRADVYVSTKTTCCATYCMTGWKG ATCCAGTCTATCATTG AATGASTTRADVYATYYAKYCWWTCATKDKG Direction: Forward Position #: 14 Overlap #: 16 Alignment: AATGASTTRADVYVSTKTTCCATYCMTGWKG -------------ATCCAGTCTATCATTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 102 Combined Motif Original Motif Reverse Complement AATGASTTRADVYATYYAKYCWWTCATKDKG GTTGTGAGGATTAAATGAG AATGASTTRADVYRTYBWGWSDATYAWDTGRG Direction: Forward Position #: 14 Overlap #: 18 Alignment: AATGASTTRADVYATYYAKYCWWTCATKDKG- -------------GTTGTGAGGATTAAATGAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 349 Combined Motif Reverse Complement Reverse Complement CKCADWTKATHSWCWBMAMMVHTKAASTCATT TTCAMTCATGATTTGGCTCT CKCADWTKATHSWCTYMAMWCATGAWBTSRYTCT Direction: Forward Position #: 15 Overlap #: 18 Alignment: CKCADWTKATHSWCWBMAMMVHTKAASTCATT-- --------------TTCAMTCATGATTTGGCTCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 234 Combined Motif Reverse Complement Reverse Complement AGAMMSAVWTCATGWRTRMAGWSDATYAWDTGRG GTGTCKGGAGTTTGTTCCTT AGAMMSAVWTCATGWGTGWMKDGARTTWDTTSCKT Direction: Forward Position #: 16 Overlap #: 19 Alignment: AGAMMSAVWTCATGWRTRMAGWSDATYAWDTGRG- ---------------GTGTCKGGAGTTTGTTCCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 246 Combined Motif Original Motif Original Motif AGAMMSAVWTCATGWGTGWMKDGARTTWDTTSCKT GCAGCTTCACTCCTGA AGAMMSAVWTCATGWGYRGCTTSACTYCTKWSCKT Direction: Forward Position #: 16 Overlap #: 16 Alignment: AGAMMSAVWTCATGWGTGWMKDGARTTWDTTSCKT ---------------GCAGCTTCACTCCTGA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 99 Combined Motif Original Motif Original Motif AGAMMSAVWTCATGWGYRGCTTSACTYCTKWSCKT GCAAAKGACATGATYTCATT AGAMMSAVWTCATGWGCARMKKMMATBATBTCMTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: AGAMMSAVWTCATGWGYRGCTTSACTYCTKWSCKT ---------------GCAAAKGACATGATYTCATT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 97 Combined Motif Reverse Complement Original Motif AAYGAVATBATRYYRYKTGCWCATGAWBTSRYTCT AAGATGGCCGAAT AAYGAVATBATRYYRWAKRYGSCYGAATTSRYTCT Direction: Forward Position #: 16 Overlap #: 13 Alignment: AAYGAVATBATRYYRYKTGCWCATGAWBTSRYTCT ---------------AAGATGGCCGAAT------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 254 Combined Motif Reverse Complement Original Motif AGAMMSAATTCMGSCMKYTWKKMMATBATBTCMTT AAAATCACAAGCATTCCTAT AGAMMSAATTCMGSCAWMATYRVAAKCATTYCHWT Direction: Forward Position #: 16 Overlap #: 20 Alignment: AGAMMSAATTCMGSCMKYTWKKMMATBATBTCMTT ---------------AAAATCACAAGCATTCCTAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 328 Combined Motif Original Motif Reverse Complement AGAMMSAATTCMGSCAWMATYRVAAKCATTYCHWT KACATTGATTTTGTATC AGAMMSAATTCMGSCDAMATTGATWTYRTWTCHWT Direction: Forward Position #: 16 Overlap #: 17 Alignment: AGAMMSAATTCMGSCAWMATYRVAAKCATTYCHWT ---------------KACATTGATTTTGTATC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 281 Combined Motif Reverse Complement Original Motif AWHGAWAMMAWATCAATRTDGSCYGAATTSRYTCT AAATGGAATCAT AWHGAWAMMAWATCAAWRTGGRATSAWTTSRYTCT Direction: Forward Position #: 16 Overlap #: 12 Alignment: AWHGAWAMMAWATCAATRTDGSCYGAATTSRYTCT ---------------AAATGGAATCAT-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 235 Combined Motif Reverse Complement Reverse Complement AGAMMSAAWTSATKCCAKWTTGATWTYRTWTCHWT GCCAATTTCTCCCATTTGGA AGAMMSAAWTSATKCBMYAWTKWYTYCCWTTYGDW Direction: Forward Position #: 16 Overlap #: 20 Alignment: AGAMMSAAWTSATKCCAKWTTGATWTYRTWTCHWT ---------------GCCAATTTCTCCCATTTGGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 86 Combined Motif Original Motif Original Motif AGAMMSAAWTSATKCBMYAWTKWYTYCCWTTYGDW AGTAGGTGCTCARTAAATRB AGAMMSAAWTSATKCRVYADKTDCTCMVTWWHBRW Direction: Forward Position #: 16 Overlap #: 20 Alignment: AGAMMSAAWTSATKCBMYAWTKWYTYCCWTTYGDW ---------------AGTAGGTGCTCARTAAATRB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 332 Combined Motif Original Motif Reverse Complement AGAMMSAAWTSATKCRVYADKTDCTCMVTWWHBRW GTTTAACCATTGAGGGCCAG AGAMMSAAWTSATKCGTTWAAYVMTYVAKRDCCAG Direction: Forward Position #: 16 Overlap #: 20 Alignment: AGAMMSAAWTSATKCRVYADKTDCTCMVTWWHBRW ---------------GTTTAACCATTGAGGGCCAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 106 Combined Motif Original Motif Original Motif AGAMMSAAWTSATKCGTTWAAYVMTYVAKRDCCAG ATTGGTGTATTTACAATCCC AGAMMSAAWTSATKCRTTKRTGHATTTACAAYCMB Direction: Forward Position #: 16 Overlap #: 20 Alignment: AGAMMSAAWTSATKCGTTWAAYVMTYVAKRDCCAG ---------------ATTGGTGTATTTACAATCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 278 Combined Motif Original Motif Reverse Complement AGAMMSAAWTSATKCRTTKRTGHATTTACAAYCMB TGTTATGCCTGAAAGT AGAMMSAAWTSATKCWKTTATGCMTKAAAGWYCMB Direction: Forward Position #: 16 Overlap #: 16 Alignment: AGAMMSAAWTSATKCRTTKRTGHATTTACAAYCMB ---------------TGTTATGCCTGAAAGT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 363 Combined Motif Reverse Complement Reverse Complement BRGMWCTTTYARGCATAAYWGRATSAWTTSRYTCT WACAATCAGACCTTG BRGMWCTTTYARGCAWAMMAKMAKAMYTTGRYTCT Direction: Forward Position #: 16 Overlap #: 15 Alignment: BRGMWCTTTYARGCATAAYWGRATSAWTTSRYTCT ---------------WACAATCAGACCTTG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 213 Combined Motif Original Motif Reverse Complement BRGMWCTTTYARGCAWAMMAKMAKAMYTTGRYTCT TGTATTAGTCMMTT BRGMWCTTTYARGCATRTAWTARTCMMTTGRYTCT Direction: Forward Position #: 16 Overlap #: 14 Alignment: BRGMWCTTTYARGCAWAMMAKMAKAMYTTGRYTCT ---------------TGTATTAGTCMMTT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 305 Combined Motif Reverse Complement Original Motif AGAMMCAARYGAMTAWTAMATGCMTKAAAGWYCMB AATGACCAATTGAGAGC AGAMMCAARYGAMTAAWTGAYSMMTTRAGAGCCMB Direction: Forward Position #: 16 Overlap #: 17 Alignment: AGAMMCAARYGAMTAWTAMATGCMTKAAAGWYCMB ---------------AATGACCAATTGAGAGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 24 Combined Motif Reverse Complement Reverse Complement BRGGCTCTMAAYYSKTCAWTTARTCMMTTGRYTCT TTTCTTTGACTRG BRGGCTCTMAAYYSKTYTYTTWGWCWVKTGRYTCT Direction: Forward Position #: 16 Overlap #: 13 Alignment: BRGGCTCTMAAYYSKTCAWTTARTCMMTTGRYTCT ---------------TTTCTTTGACTRG------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 348 Combined Motif Reverse Complement Reverse Complement AGAMMCARBWGWCWAAKAMAYSMMTTRAGAGCCMB CAAASCKGTCATAGGCCAT AGAMMCARBWGWCWAMRAAACBGWYWTAGRSCMTB Direction: Forward Position #: 16 Overlap #: 19 Alignment: AGAMMCARBWGWCWAAKAMAYSMMTTRAGAGCCMB ---------------CAAASCKGTCATAGGCCAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 63 Combined Motif Original Motif Reverse Complement AGAMMCARBWGWCWAMRAAACBGWYWTAGRSCMTB AAAMAMMKMATGTTCTCACT AGAMMCARBWGWCWAAAAMACVGHMTKWKSTCACT Direction: Forward Position #: 16 Overlap #: 20 Alignment: AGAMMCARBWGWCWAMRAAACBGWYWTAGRSCMTB ---------------AAAMAMMKMATGTTCTCACT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 61 Combined Motif Reverse Complement Reverse Complement AGTGASRWYAYDCVGTYTTTTWGWCWVKTGRYTCT TGGCTTCACCCAGTGGATCC AGTGASRWYAYDCVGTKKYTTCRMCHAGTGGHTCY Direction: Forward Position #: 16 Overlap #: 20 Alignment: AGTGASRWYAYDCVGTYTTTTWGWCWVKTGRYTCT ---------------TGGCTTCACCCAGTGGATCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 289 Combined Motif Original Motif Reverse Complement AGTGASRWYAYDCVGTKKYTTCRMCHAGTGGHTCY TTTGGTGCACCCATCA AGTGASRWYAYDCVGTTTBKTSMACCMRTSRHTCY Direction: Forward Position #: 16 Overlap #: 16 Alignment: AGTGASRWYAYDCVGTKKYTTCRMCHAGTGGHTCY ---------------TTTGGTGCACCCATCA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 57 Combined Motif Reverse Complement Reverse Complement MGAHKSAKRGGTRSARBAAACVGHMTKWKSTCACT AATAAATATTT MGAHKSAKRGGTRSAAHWAAMTRHWTKWKSTCACT Direction: Forward Position #: 16 Overlap #: 11 Alignment: MGAHKSAKRGGTRSARBAAACVGHMTKWKSTCACT ---------------AATAAATATTT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 41 Combined Motif Reverse Complement Reverse Complement AGTGASRWYAWHKAYTTWDTTSMACCMRTSRHTCY TTTTTTTMTTT AGTGASRWYAWHKAYTTTDTTTMWYYMRTSRHTCY Direction: Forward Position #: 16 Overlap #: 11 Alignment: AGTGASRWYAWHKAYTTWDTTSMACCMRTSRHTCY ---------------TTTTTTTMTTT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 115 Combined Motif Reverse Complement Original Motif MGAHKSAKRMMWYAAADAAAMTRHWTKWKSTCACT ATGATCCAGCAATYCCACTH MGAHKSAKRMMWYAAATRAWCYAGYWRTYCYMMYH Direction: Forward Position #: 16 Overlap #: 20 Alignment: MGAHKSAKRMMWYAAADAAAMTRHWTKWKSTCACT ---------------ATGATCCAGCAATYCCACTH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 179 Combined Motif Original Motif Reverse Complement MGAHKSAKRMMWYAAATRAWCYAGYWRTYCYMMYH GAATACCTCCTGAAGGACCT MGAHKSAKRMMWYAARWAWACCWSCTGWASSACYT Direction: Forward Position #: 16 Overlap #: 20 Alignment: MGAHKSAKRMMWYAAATRAWCYAGYWRTYCYMMYH ---------------GAATACCTCCTGAAGGACCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 274 Combined Motif Reverse Complement Reverse Complement AKGTSSTWCAGSWGGTWTWMTTMWYYMRTSRHTCY TTTCCTTGACCAG AKGTSSTWCAGSWGGTTTCCTTGACCAGTSRHTCY Direction: Forward Position #: 16 Overlap #: 13 Alignment: AKGTSSTWCAGSWGGTWTWMTTMWYYMRTSRHTCY ---------------TTTCCTTGACCAG------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 308 Combined Motif Original Motif Reverse Complement AKGTSSTWCAGSWGGTTTCCTTGACCAGTSRHTCY GTTATTAATTGGCCTAATTT AKGTSSTWCAGSWGGKTTMYTWRWYSRSYBAATYT Direction: Forward Position #: 16 Overlap #: 20 Alignment: AKGTSSTWCAGSWGGTTTCCTTGACCAGTSRHTCY ---------------GTTATTAATTGGCCTAATTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 270 Combined Motif Original Motif Reverse Complement AKGTSSTWCAGSWGGKTTMYTWRWYSRSYBAATYT CCTMACAATCATGG AKGTSSTWCAGSWGGBYTMAYAATCVKGGBAATYT Direction: Forward Position #: 16 Overlap #: 14 Alignment: AKGTSSTWCAGSWGGKTTMYTWRWYSRSYBAATYT ---------------CCTMACAATCATGG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 184 Combined Motif Original Motif Reverse Complement AKGTSSTWCAGSWGGBYTMAYAATCVKGGBAATYT GGTCAGGATCATCAATAT AKGTSSTWCAGSWGGGBTCABRATCATSDHWATYT Direction: Forward Position #: 16 Overlap #: 18 Alignment: AKGTSSTWCAGSWGGBYTMAYAATCVKGGBAATYT ---------------GGTCAGGATCATCAATAT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 195 Combined Motif Original Motif Reverse Complement AKGTSSTWCAGSWGGGBTCABRATCATSDHWATYT ACCCAATWTGTAGTCTTTTA AKGTSSTWCAGSWGGRCYCAVTATSWWGTMTWTTW Direction: Forward Position #: 16 Overlap #: 20 Alignment: AKGTSSTWCAGSWGGGBTCABRATCATSDHWATYT ---------------ACCCAATWTGTAGTCTTTTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 129 Combined Motif Reverse Complement Reverse Complement WAAWARACWWSATABTGMGKCCWSCTGWASSACYT TGAGKCAATTAAACCTCTT WAAWARACWWSATABTGAGKCMAHYWRAMCTMYTT Direction: Forward Position #: 16 Overlap #: 19 Alignment: WAAWARACWWSATABTGMGKCCWSCTGWASSACYT ---------------TGAGKCAATTAAACCTCTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 321 Combined Motif Reverse Complement Reverse Complement AAMRAGRTKWMHTYGRCTCAVTATSWWGTMTWTTW GCTCCACCCAGTTCGAGCTT AAMRAGRTKWMHTYGGCTCMAYMYVKTKHVWKYTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAMRAGRTKWMHTYGRCTCAVTATSWWGTMTWTTW ---------------GCTCCACCCAGTTCGAGCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 356 Combined Motif Original Motif Original Motif AAMRAGRTKWMHTYGGCTCMAYMYVKTKHVWKYTT AATTAAAAGACACAGACTG AAMRAGRTKWMHTYGRMTYAAAABABWYAGABTKT Direction: Forward Position #: 16 Overlap #: 19 Alignment: AAMRAGRTKWMHTYGGCTCMAYMYVKTKHVWKYTT ---------------AATTAAAAGACACAGACTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 54 Combined Motif Original Motif Original Motif AAMRAGRTKWMHTYGRMTYAAAABABWYAGABTKT AAGGAAAAGAAA AAMRAGRTKWMHTYGAAKBAAAAGAAAYAGABTKT Direction: Forward Position #: 16 Overlap #: 12 Alignment: AAMRAGRTKWMHTYGRMTYAAAABABWYAGABTKT ---------------AAGGAAAAGAAA-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 170 Combined Motif Original Motif Original Motif AAMRAGRTKWMHTYGAAKBAAAAGAAAYAGABTKT AATCAACCCTGGYRATCAAT AAMRAGRTKWMHTYGAATCAAMMSWRRYRRWCWDT Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAMRAGRTKWMHTYGAAKBAAAAGAAAYAGABTKT ---------------AATCAACCCTGGYRATCAAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 329 Combined Motif Reverse Complement Original Motif ADWGWKKKMMWSRRTTGATTCMAHYWRAMCTMYTT GGGAGGGATATATTAGC ADWGWKKKMMWSRRTKGRWKSGATWTAWTMGCYTT Direction: Forward Position #: 16 Overlap #: 17 Alignment: ADWGWKKKMMWSRRTTGATTCMAHYWRAMCTMYTT ---------------GGGAGGGATATATTAGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 257 Combined Motif Original Motif Original Motif ADWGWKKKMMWSRRTKGRWKSGATWTAWTMGCYTT GAGAACACATGGACA ADWGWKKKMMWSRRTGRGARCAMWTKRACAGCYTT Direction: Forward Position #: 16 Overlap #: 15 Alignment: ADWGWKKKMMWSRRTKGRWKSGATWTAWTMGCYTT ---------------GAGAACACATGGACA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 326 Combined Motif Original Motif Original Motif ADWGWKKKMMWSRRTGRGARCAMWTKRACAGCYTT GACATGGAGTCAAAGG ADWGWKKKMMWSRRTGASATSRARTBAAMRGCYTT Direction: Forward Position #: 16 Overlap #: 16 Alignment: ADWGWKKKMMWSRRTGRGARCAMWTKRACAGCYTT ---------------GACATGGAGTCAAAGG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 7 Combined Motif Reverse Complement Original Motif AAMGCMYTTBAMTMSATSTCAMMSWRRYRRWCWDT GTCTCWAMAAAAAAWAMAAA AAMGCMYTTBAMTMSRTCTCAAMHAAAMAAAMAAW Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAMGCMYTTBAMTMSATSTCAMMSWRRYRRWCWDT ---------------GTCTCWAMAAAAAAWAMAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 248 Combined Motif Reverse Complement Original Motif WTTRTTTYTTTHYTTGAGAKSRARTBAAMRGCYTT TAATGGGTACAAA WTTRTTTYTTTHYTTKARWGGGWAYAAAMRGCYTT Direction: Forward Position #: 16 Overlap #: 13 Alignment: WTTRTTTYTTTHYTTGAGAKSRARTBAAMRGCYTT ---------------TAATGGGTACAAA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 70 Combined Motif Reverse Complement Reverse Complement AAMGCMYTTTKTWCCCWKTRAAMHAAAMAAAMAAW GCAGCAMTATTCACAATAG AAMGCMYTTTKTWCCBHDKMAMHAWWMAMAAHARW Direction: Forward Position #: 16 Overlap #: 19 Alignment: AAMGCMYTTTKTWCCCWKTRAAMHAAAMAAAMAAW ---------------GCAGCAMTATTCACAATAG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 119 Combined Motif Reverse Complement Original Motif WMTHTTYTRWWTHYTRRDDBGGWAYAAAMRGCYTT AAGTCCAAGATCAAGGTGYY WMTHTTYTRWWTHYTAAGTCSRARHHMAAGGYBYY Direction: Forward Position #: 16 Overlap #: 20 Alignment: WMTHTTYTRWWTHYTRRDDBGGWAYAAAMRGCYTT ---------------AAGTCCAAGATCAAGGTGYY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 162 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 162 Motif 166 Original Motif Original Motif ATGGACCTTG AAGGGACATTKGAG AAKGGACMTTKGAG Direction: Forward Position #: 2 Overlap #: 10 Alignment: -ATGGACCTTG--- AAGGGACATTKGAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 104 Original Motif Original Motif AAKGGACMTTKGAG CAACATGGATGRARCTGGAG CAACATRRWKGAMMYTGGAG Direction: Forward Position #: 7 Overlap #: 14 Alignment: ------AAKGGACMTTKGAG CAACATGGATGRARCTGGAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 306 Combined Motif Reverse Complement Original Motif CTCCAMYRTCRWKMATGTTG GACATGAGCTGGCGCTTG CTCCAMYRKMMATGAKSTKGCGCTTG Direction: Forward Position #: 9 Overlap #: 12 Alignment: CTCCAMYRTCRWKMATGTTG------ --------GACATGAGCTGGCGCTTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 171 Combined Motif Reverse Complement Original Motif CAAGCGCYASYTCATRYYMMYTGGAG AAAAGTCCACAGTCCAAAGT CAAGCGCYASYWAAWGTCCACWGKMSAAAGT Direction: Forward Position #: 12 Overlap #: 15 Alignment: CAAGCGCYASYTCATRYYMMYTGGAG----- -----------AAAAGTCCACAGTCCAAAGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 322 Combined Motif Original Motif Original Motif CAAGCGCYASYWAAWGTCCACWGKMSAAAGT AGGGCCTTTGCASWTGC CAAGCGCYASYWAARGKCCWYTGBASAWRST Direction: Forward Position #: 14 Overlap #: 17 Alignment: CAAGCGCYASYWAAWGTCCACWGKMSAAAGT -------------AGGGCCTTTGCASWTGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 363 Combined Motif Original Motif Original Motif CAAGCGCYASYWAARGKCCWYTGBASAWRST CAAGGTCTGATTGTW CAAGCGCYASYWAMARGSYCTKRTWGWWRST Direction: Forward Position #: 14 Overlap #: 15 Alignment: CAAGCGCYASYWAARGKCCWYTGBASAWRST -------------CAAGGTCTGATTGTW--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 264 Combined Motif Original Motif Reverse Complement CAAGCGCYASYWAMARGSYCTKRTWGWWRST TGTGACCTTGG CAAGCGCYASYWAHRDGACCTTGKWGWWRST Direction: Forward Position #: 14 Overlap #: 11 Alignment: CAAGCGCYASYWAMARGSYCTKRTWGWWRST -------------TGTGACCTTGG------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 350 Combined Motif Reverse Complement Original Motif ASKWWCWYCAAGGTCDMHTWKSTKGCGCTTG TCTGGAGTGGACCTCCAGCA ASKWWCWYCAAGGTCTSVWGTGKRSCKCYWGCA Direction: Forward Position #: 14 Overlap #: 18 Alignment: ASKWWCWYCAAGGTCDMHTWKSTKGCGCTTG-- -------------TCTGGAGTGGACCTCCAGCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 119 Combined Motif Original Motif Reverse Complement ASKWWCWYCAAGGTCTSVWGTGKRSCKCYWGCA KKCACCTTGATCTTGGACTT ASKWWCWYCAAGGTSKSRMVTKGABCTYKKRCWT Direction: Forward Position #: 15 Overlap #: 19 Alignment: ASKWWCWYCAAGGTCTSVWGTGKRSCKCYWGCA- --------------KKCACCTTGATCTTGGACTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 141 Combined Motif Original Motif Reverse Complement ASKWWCWYCAAGGTSKSRMVTKGABCTYKKRCWT CTACATGGACCTT ASKWWCWYCAAGGTSYTACATGGACCTYKKRCWT Direction: Forward Position #: 16 Overlap #: 13 Alignment: ASKWWCWYCAAGGTSKSRMVTKGABCTYKKRCWT ---------------CTACATGGACCTT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 231 Combined Motif Reverse Complement Reverse Complement AWGMYRMAGGTCCATGTAKSACCTTGKWGWWRST MGAAGGGACTTGCCTTGT AWGMYRMAGGTCCATVKAAGRSMYTKGCCTTGTT Direction: Forward Position #: 16 Overlap #: 18 Alignment: AWGMYRMAGGTCCATGTAKSACCTTGKWGWWRST ---------------MGAAGGGACTTGCCTTGT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 58 Combined Motif Original Motif Original Motif AWGMYRMAGGTCCATVKAAGRSMYTKGCCTTGTT ATGGACAYTTRGGTTGHTTC AWGMYRMAGGTCCATATRRRVVHYTDGVYTKDTTC Direction: Forward Position #: 16 Overlap #: 19 Alignment: AWGMYRMAGGTCCATVKAAGRSMYTKGCCTTGTT- ---------------ATGGACAYTTRGGTTGHTTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 328 Combined Motif Original Motif Reverse Complement AWGMYRMAGGTCCATATRRRVVHYTDGVYTKDTTC KACATTGATTTTGTATC AWGMYRMAGGTCCATDWVRTTGATTTKGTWTCTTC Direction: Forward Position #: 16 Overlap #: 17 Alignment: AWGMYRMAGGTCCATATRRRVVHYTDGVYTKDTTC ---------------KACATTGATTTTGTATC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 267 Combined Motif Reverse Complement Original Motif GAAGAWACRAAATCAAKVWDATGGACCTYKKRCWT ATGGACTTGAGA GAAGAWACRAAATCAATGGVCTKGASMTYKKRCWT Direction: Forward Position #: 16 Overlap #: 12 Alignment: GAAGAWACRAAATCAAKVWDATGGACCTYKKRCWT ---------------ATGGACTTGAGA-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 348 Combined Motif Original Motif Original Motif GAAGAWACRAAATCAATGGVCTKGASMTYKKRCWT ATGGCCTATGACYGSTTTG GAAGAWACRAAATCAATGGCCTWKRRCTBBTDYDT Direction: Forward Position #: 16 Overlap #: 19 Alignment: GAAGAWACRAAATCAATGGVCTKGASMTYKKRCWT ---------------ATGGCCTATGACYGSTTTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 170 Combined Motif Original Motif Reverse Complement GAAGAWACRAAATCAATGGCCTWKRRCTBBTDYDT ATTGATMKCCAGGGTTGATT GAAGAWACRAAATCAATKGAYYDBSASKGTTGHTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: GAAGAWACRAAATCAATGGCCTWKRRCTBBTDYDT ---------------ATTGATMKCCAGGGTTGATT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 271 Combined Motif Original Motif Original Motif GAAGAWACRAAATCAATKGAYYDBSASKGTTGHTT AGGGATCTAGGTTGCR GAAGAWACRAAATCAAKGGATCTVGRBTGYDGHTT Direction: Forward Position #: 16 Overlap #: 16 Alignment: GAAGAWACRAAATCAATKGAYYDBSASKGTTGHTT ---------------AGGGATCTAGGTTGCR---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 100 Combined Motif Reverse Complement Reverse Complement AAHCDKCAVMCBAGATCCYTTGATTTKGTWTCTTC CGCGGCGCTTGCGGGCCAGC AAHCDKCAVMCBAGAYSCBKHGMTTKBGKRYCWKC Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAHCDKCAVMCBAGATCCYTTGATTTKGTWTCTTC ---------------CGCGGCGCTTGCGGGCCAGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 75 Combined Motif Original Motif Original Motif AAHCDKCAVMCBAGAYSCBKHGMTTKBGKRYCWKC CATGGAGCGGKK AAHCDKCAVMCBAGACVYGGAGCKKKBGKRYCWKC Direction: Forward Position #: 16 Overlap #: 12 Alignment: AAHCDKCAVMCBAGAYSCBKHGMTTKBGKRYCWKC ---------------CATGGAGCGGKK-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 60 Combined Motif Original Motif Reverse Complement AAHCDKCAVMCBAGACVYGGAGCKKKBGKRYCWKC CTCCTGACCTCGTGATC AAHCDKCAVMCBAGACTCSKRRCBTBKKGATCWKC Direction: Forward Position #: 16 Overlap #: 17 Alignment: AAHCDKCAVMCBAGACVYGGAGCKKKBGKRYCWKC ---------------CTCCTGACCTCGTGATC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 99 Combined Motif Original Motif Reverse Complement AAHCDKCAVMCBAGACTCSKRRCBTBKKGATCWKC AATGAKATCATGTCYTTTGC AAHCDKCAVMCBAGAMAYGWGAYCDTGTSHTYTGC Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAHCDKCAVMCBAGACTCSKRRCBTBKKGATCWKC ---------------AATGAKATCATGTCYTTTGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 64 Combined Motif Original Motif Reverse Complement AAHCDKCAVMCBAGAMAYGWGAYCDTGTSHTYTGC KCCGGGCCTTAGCTGCCTTC AAHCDKCAVMCBAGABMCGGGMCYTWGYTGYCTKC Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAHCDKCAVMCBAGAMAYGWGAYCDTGTSHTYTGC ---------------KCCGGGCCTTAGCTGCCTTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 294 Combined Motif Original Motif Original Motif AAHCDKCAVMCBAGABMCGGGMCYTWGYTGYCTKC AGCTGTGAGAAGAGGGCCAC AAHCDKCAVMCBAGAAVCKGKGMKWAGMKGBCYWC Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAHCDKCAVMCBAGABMCGGGMCYTWGYTGYCTKC ---------------AGCTGTGAGAAGAGGGCCAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 82 Combined Motif Original Motif Original Motif AAHCDKCAVMCBAGAAVCKGKGMKWAGMKGBCYWC GCTTAGCACCYGGGCCAGC AAHCDKCAVMCBAGARCYTRGCACMHGGGSCMGHC Direction: Forward Position #: 16 Overlap #: 19 Alignment: AAHCDKCAVMCBAGAAVCKGKGMKWAGMKGBCYWC ---------------GCTTAGCACCYGGGCCAGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 234 Combined Motif Reverse Complement Reverse Complement GDCYGSCCCHRGTGCKAMGMTCTVGRBTGYDGHTT GTGTCKGGAGTTTGTTCCTT GDCYGSCCCHRGTGCKWRKCTBKAGKTTGTTSCTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: GDCYGSCCCHRGTGCKAMGMTCTVGRBTGYDGHTT ---------------GTGTCKGGAGTTTGTTCCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 332 Combined Motif Original Motif Original Motif GDCYGSCCCHRGTGCKWRKCTBKAGKTTGTTSCTT CTGGCCCTCAATGGTTAAAC GDCYGSCCCHRGTGCSTGGCYCTMRATKGTTAMWY Direction: Forward Position #: 16 Overlap #: 20 Alignment: GDCYGSCCCHRGTGCKWRKCTBKAGKTTGTTSCTT ---------------CTGGCCCTCAATGGTTAAAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 336 Combined Motif Original Motif Reverse Complement GDCYGSCCCHRGTGCSTGGCYCTMRATKGTTAMWY CAGGTGGTKTTTGGTTACAT GDCYGSCCCHRGTGCCWGGYSSTVWTTGGTTACAT Direction: Forward Position #: 16 Overlap #: 20 Alignment: GDCYGSCCCHRGTGCSTGGCYCTMRATKGTTAMWY ---------------CAGGTGGTKTTTGGTTACAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 273 Combined Motif Original Motif Reverse Complement GDCYGSCCCHRGTGCCWGGYSSTVWTTGGTTACAT GTAGGCCTAGGCT GDCYGSCCCHRGTGCSTRGKCCTAKKYKGTTACAT Direction: Forward Position #: 16 Overlap #: 13 Alignment: GDCYGSCCCHRGTGCCWGGYSSTVWTTGGTTACAT ---------------GTAGGCCTAGGCT------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 333 Combined Motif Original Motif Reverse Complement GDCYGSCCCHRGTGCSTRGKCCTAKKYKGTTACAT AAAGCTGGAGCTATTATCTA GDCYGSCCCHRGTGCRWAGCYSKAGSTWKTWWCWW Direction: Forward Position #: 16 Overlap #: 20 Alignment: GDCYGSCCCHRGTGCSTRGKCCTAKKYKGTTACAT ---------------AAAGCTGGAGCTATTATCTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 52 Combined Motif Reverse Complement Original Motif WWGWWARWASCTYSMGCTWKGCACMHGGGSCMGHC GACTGGCAGGCAGCTCCACC WWGWWARWASCTYSMGMYTGGCAGGCRGSYCCRCC Direction: Forward Position #: 16 Overlap #: 20 Alignment: WWGWWARWASCTYSMGCTWKGCACMHGGGSCMGHC ---------------GACTGGCAGGCAGCTCCACC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 291 Combined Motif Original Motif Original Motif WWGWWARWASCTYSMGMYTGGCAGGCRGSYCCRCC CTGAGGACCTGAGGTCRTA WWGWWARWASCTYSMSTSWGGMMCBSAGGTCVTMC Direction: Forward Position #: 16 Overlap #: 19 Alignment: WWGWWARWASCTYSMGMYTGGCAGGCRGSYCCRCC ---------------CTGAGGACCTGAGGTCRTA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 225 Combined Motif Reverse Complement Original Motif GYAVGACCTSVGRYCCWSASYSKAGSTWKTWWCWW GCACATGTAYCCYAGAACTT GYAVGACCTSVGRYCSYMCRTGTABCYHDKAACTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: GYAVGACCTSVGRYCCWSASYSKAGSTWKTWWCWW ---------------GCACATGTAYCCYAGAACTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 227 Combined Motif Original Motif Original Motif GYAVGACCTSVGRYCSYMCRTGTABCYHDKAACTT CCCAAATCTCATSTTGAAT GYAVGACCTSVGRYCCCCAAWKYWCMYBTTRAMTT Direction: Forward Position #: 16 Overlap #: 19 Alignment: GYAVGACCTSVGRYCSYMCRTGTABCYHDKAACTT ---------------CCCAAATCTCATSTTGAAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 324 Combined Motif Reverse Complement Reverse Complement AAYTMAABMYGWKRWTTGGGGMMCBSAGGTCVTMC TACAGGTGCGT AAYTMAABMYGWKRWTWSRGGHSCGTAGGTCVTMC Direction: Forward Position #: 16 Overlap #: 11 Alignment: AAYTMAABMYGWKRWTTGGGGMMCBSAGGTCVTMC ---------------TACAGGTGCGT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 308 Combined Motif Reverse Complement Reverse Complement GYAVGACCTACGSHCCKSWAWKYWCMYBTTRAMTT GTTATTAATTGGCCTAATTT GYAVGACCTACGSHCSTKAWTDHTYRKCYTAAHTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: GYAVGACCTACGSHCCKSWAWKYWCMYBTTRAMTT ---------------GTTATTAATTGGCCTAATTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 299 Combined Motif Reverse Complement Reverse Complement AAHTTAKGYMMAHDAWTRASGHSCGTAGGTCVTMC TTGGAGGTTCTAGCAGGG AAHTTAKGYMMAHDATTGRVGDBYSTAGSWSGKMC Direction: Forward Position #: 16 Overlap #: 18 Alignment: AAHTTAKGYMMAHDAWTRASGHSCGTAGGTCVTMC ---------------TTGGAGGTTCTAGCAGGG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 112 Combined Motif Original Motif Original Motif AAHTTAKGYMMAHDATTGRVGDBYSTAGSWSGKMC GCTGTGTGACCTTGGGCAAG AAHTTAKGYMMAHDAKYKGHGTGHCYWKSRGSRAS Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAHTTAKGYMMAHDATTGRVGDBYSTAGSWSGKMC ---------------GCTGTGTGACCTTGGGCAAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 178 Combined Motif Reverse Complement Original Motif STKSCMSYWMGHCACHCRKYTDHTYRKCYTAAHTT ACTGTCTTCCACCTCCACAT STKSCMSYWMGHCACACTGTYTTYYACCTYMAYWT Direction: Forward Position #: 16 Overlap #: 20 Alignment: STKSCMSYWMGHCACHCRKYTDHTYRKCYTAAHTT ---------------ACTGTCTTCCACCTCCACAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 159 Combined Motif Reverse Complement Original Motif AWKTRMAGGTKKAAKACAGTGTGHCYWKSRGSRAS ACAGGCTTTGTGTGAGCA AWKTRMAGGTKKAAKACAGKSTTTSTGTGAGCAAS Direction: Forward Position #: 16 Overlap #: 18 Alignment: AWKTRMAGGTKKAAKACAGTGTGHCYWKSRGSRAS ---------------ACAGGCTTTGTGTGAGCA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 208 Combined Motif Original Motif Reverse Complement AWKTRMAGGTKKAAKACAGKSTTTSTGTGAGCAAS ATCGCCCTCAC AWKTRMAGGTKKAAKAYMGSCYTYRYGTGAGCAAS Direction: Forward Position #: 16 Overlap #: 11 Alignment: AWKTRMAGGTKKAAKACAGKSTTTSTGTGAGCAAS ---------------ATCGCCCTCAC--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 73 Combined Motif Original Motif Reverse Complement AWKTRMAGGTKKAAKAYMGSCYTYRYGTGAGCAAS CTTGCAGTTTG AWKTRMAGGTKKAAKMTYGCMSTTDSGTGAGCAAS Direction: Forward Position #: 16 Overlap #: 11 Alignment: AWKTRMAGGTKKAAKAYMGSCYTYRYGTGAGCAAS ---------------CTTGCAGTTTG--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 53 Combined Motif Original Motif Reverse Complement AWKTRMAGGTKKAAKMTYGCMSTTDSGTGAGCAAS CTTGGGTGGTCGATGGGAC AWKTRMAGGTKKAAKCTTGSGKKKTCGWKRGSAMS Direction: Forward Position #: 16 Overlap #: 19 Alignment: AWKTRMAGGTKKAAKMTYGCMSTTDSGTGAGCAAS ---------------CTTGGGTGGTCGATGGGAC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 311 Combined Motif Original Motif Reverse Complement AWKTRMAGGTKKAAKCTTGSGKKKTCGWKRGSAMS TTGGTAGGATCCGTGATGCC AWKTRMAGGTKKAAKYTKGKAGGDTCSGTGRKRCC Direction: Forward Position #: 16 Overlap #: 20 Alignment: AWKTRMAGGTKKAAKCTTGSGKKKTCGWKRGSAMS ---------------TTGGTAGGATCCGTGATGCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 224 Combined Motif Reverse Complement Original Motif GGMRKCACSGADCCTRCYAMYTTYYACCTYMAYWT AATGAGTTAAGACTTTG GGMRKCACSGADCCTAMTRABTTAMRMCTTTRYWT Direction: Forward Position #: 16 Overlap #: 17 Alignment: GGMRKCACSGADCCTRCYAMYTTYYACCTYMAYWT ---------------AATGAGTTAAGACTTTG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 355 Combined Motif Original Motif Original Motif GGMRKCACSGADCCTAMTRABTTAMRMCTTTRYWT TATGAGCCTGTAA GGMRKCACSGADCCTWATGAGYYWRKAMTTTRYWT Direction: Forward Position #: 16 Overlap #: 13 Alignment: GGMRKCACSGADCCTAMTRABTTAMRMCTTTRYWT ---------------TATGAGCCTGTAA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 98 Combined Motif Reverse Complement Original Motif AWKKAAAYTRMWKKCTCATWAGGDTCSGTGRKRCC AGTTCCGGGTGGGCGTGGG AWKKAAAYTRMWKKCWSWTCMGGGTSGGYGDGGSC Direction: Forward Position #: 16 Overlap #: 19 Alignment: AWKKAAAYTRMWKKCTCATWAGGDTCSGTGRKRCC ---------------AGTTCCGGGTGGGCGTGGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 62 Combined Motif Original Motif Original Motif AWKKAAAYTRMWKKCWSWTCMGGGTSGGYGDGGSC AGGAACAGCTCCRGTCTAC AWKKAAAYTRMWKKCAGDWACRGSTCSRGKCKRCC Direction: Forward Position #: 16 Overlap #: 19 Alignment: AWKKAAAYTRMWKKCWSWTCMGGGTSGGYGDGGSC ---------------AGGAACAGCTCCRGTCTAC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 184 Combined Motif Reverse Complement Original Motif GGKRGRCMSGASCKGTWHCTGYYWRKAMTTTRYWT ATATTGATGATCCTGACC GGKRGRCMSGASCKGWTAYTGATKATMCTKAVCWT Direction: Forward Position #: 16 Overlap #: 18 Alignment: GGKRGRCMSGASCKGTWHCTGYYWRKAMTTTRYWT ---------------ATATTGATGATCCTGACC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 169 Combined Motif Original Motif Reverse Complement GGKRGRCMSGASCKGWTAYTGATKATMCTKAVCWT TTTTATAGGATTTGGG GGKRGRCMSGASCKGTTWTWKAKGATTYKGRVCWT Direction: Forward Position #: 16 Overlap #: 16 Alignment: GGKRGRCMSGASCKGWTAYTGATKATMCTKAVCWT ---------------TTTTATAGGATTTGGG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 144 Combined Motif Reverse Complement Original Motif AWGVMCYMAATCYTRWAWAACRGSTCSRGKCKRCC CCGCTGCACTGTGGGAGCCC AWGVMCYMAATCYTRYMRMWSMRCTSYGGGAKMCC Direction: Forward Position #: 16 Overlap #: 20 Alignment: AWGVMCYMAATCYTRWAWAACRGSTCSRGKCKRCC ---------------CCGCTGCACTGTGGGAGCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 93 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 93 Motif 128 Original Motif Reverse Complement CCATGTGCGG CMGCTCCGAGTGCGG CCRWGTGCGGCMGCT Direction: Backward Position #: 1 Overlap #: 10 Alignment: -----CCATGTGCGG CMGCTCCGAGTGCGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 25 Original Motif Reverse Complement CCRWGTGCGGCMGCT GTACCTCAGWTGGAAATG GTACCTCMGWKKGMRRYSGCT Direction: Forward Position #: 7 Overlap #: 12 Alignment: ------CCRWGTGCGGCMGCT GTACCTCAGWTGGAAATG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 120 Combined Motif Original Motif Reverse Complement GTACCTCMGWKKGMRRYSGCT GGGASCACATGG GTACCTCMGRKDGCAMHBGST Direction: Forward Position #: 9 Overlap #: 12 Alignment: GTACCTCMGWKKGMRRYSGCT --------GGGASCACATGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 324 Combined Motif Reverse Complement Reverse Complement ASCVHRTGCDYMCYGAGGTAC TACAGGTGCGT ASCVHRTGYACASBKRSGTAC Direction: Forward Position #: 9 Overlap #: 11 Alignment: ASCVHRTGCDYMCYGAGGTAC --------TACAGGTGCGT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 257 Combined Motif Reverse Complement Original Motif GTACSKYBSTGTMCAMHBGST GAGAACACATGGACA GTACSKYBGWGWACACATGGWCA Direction: Forward Position #: 9 Overlap #: 13 Alignment: GTACSKYBSTGTMCAMHBGST-- --------GAGAACACATGGACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 167 Combined Motif Reverse Complement Reverse Complement TGWCCATGTGTWCWCBKRSGTAC GCACAGGAGCGG TGWCCATGTGYACWSGAGCGKAC Direction: Forward Position #: 10 Overlap #: 12 Alignment: TGWCCATGTGTWCWCBKRSGTAC ---------GCACAGGAGCGG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 306 Combined Motif Reverse Complement Reverse Complement GTYCGCTCSWGTKCACATGGWCA CAAGCGCCAGCTCATGTC GTYCGCTCSYRWGCRCMWGSTCATGTC Direction: Forward Position #: 10 Overlap #: 14 Alignment: GTYCGCTCSWGTKCACATGGWCA---- ---------CAAGCGCCAGCTCATGTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 31 Combined Motif Reverse Complement Reverse Complement GACATGASCWRGMGCWKKSGAGCGKAC CGGCTCGCGCACGG GACATGASCWRSVGCTBGSGMRCGGAC Direction: Forward Position #: 12 Overlap #: 14 Alignment: GACATGASCWRGMGCWKKSGAGCGKAC -----------CGGCTCGCGCACGG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 33 Combined Motif Reverse Complement Original Motif GTCCGKRCSCBAGCVSMWGSTCATGTC ACGCCCACGGAGTCTC GTCCGKRCSCBASSCCCASSKMRTSTC Direction: Forward Position #: 12 Overlap #: 16 Alignment: GTCCGKRCSCBAGCVSMWGSTCATGTC -----------ACGCCCACGGAGTCTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 206 Combined Motif Reverse Complement Reverse Complement GASAKYYSSTGGGSSTBGSGMRCGGAC GGRCKCACWGGAGC GASAKYYSSTGGGRCTCRCDGGMGSAC Direction: Forward Position #: 12 Overlap #: 14 Alignment: GASAKYYSSTGGGSSTBGSGMRCGGAC -----------GGRCKCACWGGAGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 155 Combined Motif Original Motif Original Motif GASAKYYSSTGGGRCTCRCDGGMGSAC TCCCTCCCGGACGGGGYGGC GASAKYYSSTGKSCCTCCCGGRCGGRSYGGC Direction: Forward Position #: 12 Overlap #: 16 Alignment: GASAKYYSSTGGGRCTCRCDGGMGSAC---- -----------TCCCTCCCGGACGGGGYGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 82 Combined Motif Reverse Complement Reverse Complement GCCKSKCCGKCCGGGAGGSRCASSKMRTSTC GCTGGCCCKGGTGCTAAGC GCCKSKCCGKCCGGSWGGCCCDGGTVMTVWSC Direction: Forward Position #: 14 Overlap #: 18 Alignment: GCCKSKCCGKCCGGGAGGSRCASSKMRTSTC- -------------GCTGGCCCKGGTGCTAAGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 331 Combined Motif Reverse Complement Reverse Complement GSWBARVACCDGGGCCWSCCGGRCGGRSYGGC GCCTCCTTGAGCTGTGGTGG GSWBARVACCDGGGSCHKCCKKGAGSWGYGGYGG Direction: Forward Position #: 15 Overlap #: 18 Alignment: GSWBARVACCDGGGCCWSCCGGRCGGRSYGGC-- --------------GCCTCCTTGAGCTGTGGTGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 98 Combined Motif Original Motif Original Motif GSWBARVACCDGGGSCHKCCKKGAGSWGYGGYGG AGTTCCGGGTGGGCGTGGG GSWBARVACCDGGGSMGTYCYGGRKGGGYGKBGG Direction: Forward Position #: 16 Overlap #: 19 Alignment: GSWBARVACCDGGGSCHKCCKKGAGSWGYGGYGG ---------------AGTTCCGGGTGGGCGTGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 284 Combined Motif Original Motif Original Motif GSWBARVACCDGGGSMGTYCYGGRKGGGYGKBGG CATTTGGGAGCCCATTGA GSWBARVACCDGGGSCATTYGGGAGSBSMKTGRG Direction: Forward Position #: 16 Overlap #: 18 Alignment: GSWBARVACCDGGGSMGTYCYGGRKGGGYGKBGG ---------------CATTTGGGAGCCCATTGA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 305 Combined Motif Reverse Complement Original Motif CMCARYSBSCTCCCMAATGSCCCDGGTVMTVWSC AATGACCAATTGAGAGC CMCARYSBSCTCCCMAATGVCCMAKKKAGWGCSC Direction: Forward Position #: 16 Overlap #: 17 Alignment: CMCARYSBSCTCCCMAATGSCCCDGGTVMTVWSC ---------------AATGACCAATTGAGAGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 163 Combined Motif Reverse Complement Original Motif GSGCWCTYRRTYGGBCATTYGGGAGSBSMKTGRG CCTCCGTGGGCTCC GSGCWCTYRRTYGGBCMTYCGKGRGCTCCKTGRG Direction: Forward Position #: 16 Overlap #: 14 Alignment: GSGCWCTYRRTYGGBCATTYGGGAGSBSMKTGRG ---------------CCTCCGTGGGCTCC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 56 Combined Motif Reverse Complement Original Motif CMCARGGAGCMCRCGKARGVCCMAKKKAGWGCSC CRTGAGCCACYGYRCCYGGC CMCARGGAGCMCRCGBAKGASCCACYGHGHSYGSC Direction: Forward Position #: 16 Overlap #: 19 Alignment: CMCARGGAGCMCRCGKARGVCCMAKKKAGWGCSC- ---------------CRTGAGCCACYGYRCCYGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 95 Combined Motif Original Motif Reverse Complement CMCARGGAGCMCRCGBAKGASCCACYGHGHSYGSC CACCTCCCAGACMGGGT CMCARGGAGCMCRCGCABSWCCCAGASMGBGTGSC Direction: Forward Position #: 16 Overlap #: 17 Alignment: CMCARGGAGCMCRCGBAKGASCCACYGHGHSYGSC ---------------CACCTCCCAGACMGGGT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 23 Combined Motif Original Motif Original Motif CMCARGGAGCMCRCGCABSWCCCAGASMGBGTGSC GGTTCATCTCACTAGGGAGT CMCARGGAGCMCRCGSRTTCMYCWCACTRGGKRGY Direction: Forward Position #: 16 Overlap #: 20 Alignment: CMCARGGAGCMCRCGCABSWCCCAGASMGBGTGSC ---------------GGTTCATCTCACTAGGGAGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 310 Combined Motif Reverse Complement Reverse Complement MCKYCCMAGTGWGMYGAAMSCGKGRGCTCCKTGRG GGATTTMKGACTTGCATGGG MCKYCCMAGTGWGMYGGAYYYVKGASYTSCWTGGG Direction: Forward Position #: 16 Overlap #: 20 Alignment: MCKYCCMAGTGWGMYGAAMSCGKGRGCTCCKTGRG ---------------GGATTTMKGACTTGCATGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 348 Combined Motif Reverse Complement Original Motif CCCAWGSAMSTCRVMMMTCCMYCWCACTRGGKRGY ATGGCCTATGACYGSTTTG CCCAWGSAMSTCRVMATKSCCTMTGACYGGKTWGY Direction: Forward Position #: 16 Overlap #: 19 Alignment: CCCAWGSAMSTCRVMMMTCCMYCWCACTRGGKRGY ---------------ATGGCCTATGACYGSTTTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 2 Combined Motif Original Motif Original Motif CCCAWGSAMSTCRVMATKSCCTMTGACYGGKTWGY ATTAGCYRGGCRTGGTGGC CCCAWGSAMSTCRVMATKRSCYRKGMSYGGTKGSY Direction: Forward Position #: 16 Overlap #: 19 Alignment: CCCAWGSAMSTCRVMATKSCCTMTGACYGGKTWGY ---------------ATTAGCYRGGCRTGGTGGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 230 Combined Motif Original Motif Reverse Complement CCCAWGSAMSTCRVMATKRSCYRKGMSYGGTKGSY TTTTCACATGCCTTTCT CCCAWGSAMSTCRVMWTTDCMCATGCCTKKYTGSY Direction: Forward Position #: 16 Overlap #: 17 Alignment: CCCAWGSAMSTCRVMATKRSCYRKGMSYGGTKGSY ---------------TTTTCACATGCCTTTCT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 74 Combined Motif Reverse Complement Reverse Complement MSCAKYRAGGCATGYGDAAWYVKGASYTSCWTGGG CCATCTAGGAAGTG MSCAKYRAGGCATGYSMAWMTMGGAMKTGCWTGGG Direction: Forward Position #: 16 Overlap #: 14 Alignment: MSCAKYRAGGCATGYGDAAWYVKGASYTSCWTGGG ---------------CCATCTAGGAAGTG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 157 Combined Motif Reverse Complement Reverse Complement CCCAWGCAYYTCCYARWTRSMCATGCCTKKYTGSY CCGCGCCGTGCGC CCCAWGCAYYTCCYACHKVGCCRTGCSYKKYTGSY Direction: Forward Position #: 16 Overlap #: 13 Alignment: CCCAWGCAYYTCCYARWTRSMCATGCCTKKYTGSY ---------------CCGCGCCGTGCGC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 215 Combined Motif Original Motif Original Motif CCCAWGCAYYTCCYACHKVGCCRTGCSYKKYTGSY HGCTCCTGTGSKCCC CCCAWGCAYYTCCYACGSTSCYGTGCBCBBYTGSY Direction: Forward Position #: 16 Overlap #: 15 Alignment: CCCAWGCAYYTCCYACHKVGCCRTGCSYKKYTGSY ---------------HGCTCCTGTGSKCCC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 277 Combined Motif Reverse Complement Reverse Complement MSCAKBBGBGCACKGSASCGTMGGAMKTGCWTGGG GCTTCTGGTGAGGGC MSCAKBBGBGCACKGGCBTCTGGKRAGKGCWTGGG Direction: Forward Position #: 16 Overlap #: 15 Alignment: MSCAKBBGBGCACKGSASCGTMGGAMKTGCWTGGG ---------------GCTTCTGGTGAGGGC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 322 Combined Motif Original Motif Reverse Complement MSCAKBBGBGCACKGGCBTCTGGKRAGKGCWTGGG GCAWSTGCAAAGGCCCT MSCAKBBGBGCACKGGCDHSTGSDAAGKSCHTGGG Direction: Forward Position #: 16 Overlap #: 17 Alignment: MSCAKBBGBGCACKGGCBTCTGGKRAGKGCWTGGG ---------------GCAWSTGCAAAGGCCCT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 235 Combined Motif Original Motif Original Motif MSCAKBBGBGCACKGGCDHSTGSDAAGKSCHTGGG TCCAAATGGGAGAAATTGGC MSCAKBBGBGCACKGKCCAAWKGGRAGRMMYTGGS Direction: Forward Position #: 16 Overlap #: 20 Alignment: MSCAKBBGBGCACKGGCDHSTGSDAAGKSCHTGGG ---------------TCCAAATGGGAGAAATTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 196 Combined Motif Reverse Complement Reverse Complement SCCAMYYKCTMCCRWTTGGRCYGTGCBCBBYTGSY CAAGCCTSKGCAATGGCAGG SCCAMYYKCTMCCRWCAAGMCTGKGCAMTGGYRGK Direction: Forward Position #: 16 Overlap #: 20 Alignment: SCCAMYYKCTMCCRWTTGGRCYGTGCBCBBYTGSY ---------------CAAGCCTSKGCAATGGCAGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 302 Combined Motif Reverse Complement Reverse Complement YCKKCCAYTGCRCAGRCTTGWKGGRAGRMMYTGGS GCTCTCAGGGTC YCKKCCAYTGCRCAGGCTYTCDGGGWSRMMYTGGS Direction: Forward Position #: 16 Overlap #: 12 Alignment: YCKKCCAYTGCRCAGRCTTGWKGGRAGRMMYTGGS ---------------GCTCTCAGGGTC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 37 Combined Motif Original Motif Original Motif YCKKCCAYTGCRCAGGCTYTCDGGGWSRMMYTGGS CCTTGAGAGCW YCKKCCAYTGCRCAGSCTTGAGRGSWSRMMYTGGS Direction: Forward Position #: 16 Overlap #: 11 Alignment: YCKKCCAYTGCRCAGGCTYTCDGGGWSRMMYTGGS ---------------CCTTGAGAGCW--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 144 Combined Motif Original Motif Reverse Complement YCKKCCAYTGCRCAGSCTTGAGRGSWSRMMYTGGS GGGCTCCCACAGTGCAGCGG YCKKCCAYTGCRCAGGSKYKMSCRCAGTGCAKSGG Direction: Forward Position #: 16 Overlap #: 20 Alignment: YCKKCCAYTGCRCAGSCTTGAGRGSWSRMMYTGGS ---------------GGGCTCCCACAGTGCAGCGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 27 Combined Motif Original Motif Original Motif YCKKCCAYTGCRCAGGSKYKMSCRCAGTGCAKSGG CACTTCCCAGACGGGGCG YCKKCCAYTGCRCAGSACYTCCCASASKGSRBGGG Direction: Forward Position #: 16 Overlap #: 18 Alignment: YCKKCCAYTGCRCAGGSKYKMSCRCAGTGCAKSGG ---------------CACTTCCCAGACGGGGCG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 200 Combined Motif Reverse Complement Original Motif CCCVMSCYSTSTGGGAMGTSCTGKGCAMTGGYRGK ACCCCGTCTGGGA CCCVMSCYSTSTGGGACCCCSTCTGSGATGGYRGK Direction: Forward Position #: 16 Overlap #: 13 Alignment: CCCVMSCYSTSTGGGAMGTSCTGKGCAMTGGYRGK ---------------ACCCCGTCTGGGA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 176 Combined Motif Reverse Complement Reverse Complement YCKKCCATCSCAGASGGGGTCCCASASKGSRBGGG AACAACASACACTGGGGCCT YCKKCCATCSCAGASRRSRWCMCACACKGGGGSSK Direction: Forward Position #: 16 Overlap #: 20 Alignment: YCKKCCATCSCAGASGGGGTCCCASASKGSRBGGG ---------------AACAACASACACTGGGGCCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 270 Combined Motif Original Motif Reverse Complement YCKKCCATCSCAGASRRSRWCMCACACKGGGGSSK CCTMACAATCATGG YCKKCCATCSCAGASVCYMACAMWCAYGGGGGSSK Direction: Forward Position #: 16 Overlap #: 14 Alignment: YCKKCCATCSCAGASRRSRWCMCACACKGGGGSSK ---------------CCTMACAATCATGG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 104 Combined Motif Original Motif Reverse Complement YCKKCCATCSCAGASVCYMACAMWCAYGGGGGSSK CTCCAGKTMCATCCATGTTG YCKKCCATCSCAGASCYCMASDHHCATSSRBGTBK Direction: Forward Position #: 16 Overlap #: 20 Alignment: YCKKCCATCSCAGASVCYMACAMWCAYGGGGGSSK ---------------CTCCAGKTMCATCCATGTTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 100 Combined Motif Reverse Complement Reverse Complement YBACBKSSATGHHDSTRGMGSTCTGSGATGGYRGK CGCGGCGCTTGCGGGCCAGC YBACBKSSATGHHDSYGSVGCKCTKGSRKGCCAGC Direction: Forward Position #: 16 Overlap #: 20 Alignment: YBACBKSSATGHHDSTRGMGSTCTGSGATGGYRGK ---------------CGCGGCGCTTGCGGGCCAGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 108 Combined Motif Original Motif Original Motif YBACBKSSATGHHDSYGSVGCKCTKGSRKGCCAGC CGAGCCTCCCCGAYGAGCGC YBACBKSSATGHHDSCGAGSCTCYBSSABGMSMGC Direction: Forward Position #: 16 Overlap #: 20 Alignment: YBACBKSSATGHHDSYGSVGCKCTKGSRKGCCAGC ---------------CGAGCCTCCCCGAYGAGCGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 105 Combined Motif Original Motif Original Motif YBACBKSSATGHHDSCGAGSCTCYBSSABGMSMGC GCCTCTCCCTCCACACCTCC YBACBKSSATGHHDSSSCKCYYCCTCCACRCCTSC Direction: Forward Position #: 16 Overlap #: 20 Alignment: YBACBKSSATGHHDSCGAGSCTCYBSSABGMSMGC ---------------GCCTCTCCCTCCACACCTCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 159 Combined Motif Original Motif Reverse Complement YBACBKSSATGHHDSSSCKCYYCCTCCACRCCTSC TGCTCACACAAAGCCTGT YBACBKSSATGHHDSTGCTCACMCWMMRCMYSTSC Direction: Forward Position #: 16 Overlap #: 18 Alignment: YBACBKSSATGHHDSSSCKCYYCCTCCACRCCTSC ---------------TGCTCACACAAAGCCTGT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 193 Combined Motif Original Motif Reverse Complement YBACBKSSATGHHDSTGCTCACMCWMMRCMYSTSC GKCTGTACCCCCATTGTAT YBACBKSSATGHHDSKKCTSTMCCHCCAYYKKWBC Direction: Forward Position #: 16 Overlap #: 19 Alignment: YBACBKSSATGHHDSTGCTCACMCWMMRCMYSTSC ---------------GKCTGTACCCCCATTGTAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 76 Combined Motif Original Motif Original Motif YBACBKSSATGHHDSKKCTSTMCCHCCAYYKKWBC GTGCCAGGCACTGTKCTARG YBACBKSSATGHHDSGTSYCWVVCMCYRTBSTADS Direction: Forward Position #: 16 Overlap #: 20 Alignment: YBACBKSSATGHHDSKKCTSTMCCHCCAYYKKWBC ---------------GTGCCAGGCACTGTKCTARG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 78 Combined Motif Reverse Complement Original Motif SHTASVAMMGYGVVWGMSACSDHHCATSSRBGTBK CGAGCCCTGCCCCGCGG SHTASVAMMGYGVVWSRARCCCTGCMYCGVGGTBK Direction: Forward Position #: 16 Overlap #: 17 Alignment: SHTASVAMMGYGVVWGMSACSDHHCATSSRBGTBK ---------------CGAGCCCTGCCCCGCGG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 260 Combined Motif Original Motif Original Motif SHTASVAMMGYGVVWSRARCCCTGCMYCGVGGTBK GGTGCCCCTCTGGGACRAA SHTASVAMMGYGVVWGGWGCCCYTCYSSGABGWAK Direction: Forward Position #: 16 Overlap #: 19 Alignment: SHTASVAMMGYGVVWSRARCCCTGCMYCGVGGTBK ---------------GGTGCCCCTCTGGGACRAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 75 Combined Motif Reverse Complement Reverse Complement YTWCBTCSSMGAKGGGCWCCWVVCMCYRTBSTADS RRCCGCTCCATG YTWCBTCSSMGAKGGGMMCSMTCCAYBRTBSTADS Direction: Forward Position #: 16 Overlap #: 12 Alignment: YTWCBTCSSMGAKGGGCWCCWVVCMCYRTBSTADS ---------------RRCCGCTCCATG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 36 Combined Motif Original Motif Original Motif YTWCBTCSSMGAKGGGMMCSMTCCAYBRTBSTADS ACATCCCAGACGATGGGCG YTWCBTCSSMGAKGGRCAYCCCMSACGATGGKMGS Direction: Forward Position #: 16 Overlap #: 19 Alignment: YTWCBTCSSMGAKGGGMMCSMTCCAYBRTBSTADS ---------------ACATCCCAGACGATGGGCG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 48 Combined Motif Original Motif Original Motif YTWCBTCSSMGAKGGRCAYCCCMSACGATGGKMGS AGCTCCCAGCGTGAGCGACG YTWCBTCSSMGAKGGASCTCCCAGMVKRWGSGABG Direction: Forward Position #: 16 Overlap #: 20 Alignment: YTWCBTCSSMGAKGGRCAYCCCMSACGATGGKMGS ---------------AGCTCCCAGCGTGAGCGACG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 133 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 133 Motif 84 Reverse Complement Reverse Complement TGGGGACMCAG GGCACTGCTGGGGGACCCAG KGGGGACMCAGGGCACTGCT Direction: Backward Position #: 1 Overlap #: 11 Alignment: ---------TGGGGACMCAG GGCACTGCTGGGGGACCCAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 193 Combined Motif Reverse Complement Reverse Complement AGCAGTGCCCTGRGTCCCCY GKCTGTACCCCCATTGTAT AGCAGTGCSYYKGKWCCCCCATTGTAT Direction: Forward Position #: 9 Overlap #: 12 Alignment: AGCAGTGCCCTGRGTCCCCY------- --------GKCTGTACCCCCATTGTAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 245 Combined Motif Reverse Complement Reverse Complement ATACAATGGGGGWYCRKKSGCACTGCT TTGAGGAGGCAGTCTG ATACAATGGGGKTBMGGDGGCASTSYK Direction: Forward Position #: 12 Overlap #: 16 Alignment: ATACAATGGGGGWYCRKKSGCACTGCT -----------TTGAGGAGGCAGTCTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 91 Combined Motif Reverse Complement Reverse Complement RKSASTGCCDCCYBARCCCCATTGTAT TTGAGACMGKGTCT RKSASTGCCDCYTGAGMCCSDKTSTAT Direction: Forward Position #: 12 Overlap #: 14 Alignment: RKSASTGCCDCCYBARCCCCATTGTAT -----------TTGAGACMGKGTCT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 112 Combined Motif Original Motif Reverse Complement RKSASTGCCDCYTGAGMCCSDKTSTAT CTTGCCCAAGGTCACACAGC RKSASTGCCDCCTKRSMCMVRKTCWMWCAGC Direction: Forward Position #: 12 Overlap #: 16 Alignment: RKSASTGCCDCYTGAGMCCSDKTSTAT---- -----------CTTGCCCAAGGTCACACAGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 320 Combined Motif Original Motif Original Motif RKSASTGCCDCCTKRSMCMVRKTCWMWCAGC CATCTGGAGCCCCA RKSASTGCCDCCTYABCYRGAGYCCCWCAGC Direction: Forward Position #: 14 Overlap #: 14 Alignment: RKSASTGCCDCCTKRSMCMVRKTCWMWCAGC -------------CATCTGGAGCCCCA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 29 Combined Motif Original Motif Reverse Complement RKSASTGCCDCCTYABCYRGAGYCCCWCAGC MGTCTMKCTCTGTKGCCCAG RKSASTGCCDCCTMRTCTVGMKCYBYDSMSCAG Direction: Forward Position #: 14 Overlap #: 18 Alignment: RKSASTGCCDCCTYABCYRGAGYCCCWCAGC-- -------------MGTCTMKCTCTGTKGCCCAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 326 Combined Motif Reverse Complement Original Motif CTGSYSDMBMGRRCVAGAMRAGGDGGCASTSYK GACATGGAGTCAAAGG CTGSYSDMBMGRRCGASAYGRAGTSRMAGKSYK Direction: Forward Position #: 15 Overlap #: 16 Alignment: CTGSYSDMBMGRRCVAGAMRAGGDGGCASTSYK --------------GACATGGAGTCAAAGG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 279 Combined Motif Reverse Complement Reverse Complement RKSRCTYKSACTMCMTSTCGMKCYBYDSMSCAG MGTGTGATGTCTCCCCC RKSRCTYKSACTMCMKTKYGATSTCTHCCCCAG Direction: Forward Position #: 15 Overlap #: 17 Alignment: RKSRCTYKSACTMCMTSTCGMKCYBYDSMSCAG --------------MGTGTGATGTCTCCCCC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 26 Combined Motif Original Motif Original Motif RKSRCTYKSACTMCMKTKYGATSTCTHCCCCAG CTCCTGCCTCAGCCTCCCRA RKSRCTYKSACTMCCTYBYGMYTYMKCCYCCMGA Direction: Forward Position #: 15 Overlap #: 19 Alignment: RKSRCTYKSACTMCMKTKYGATSTCTHCCCCAG- --------------CTCCTGCCTCAGCCTCCCRA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 105 Combined Motif Original Motif Original Motif RKSRCTYKSACTMCCTYBYGMYTYMKCCYCCMGA GCCTCTCCCTCCACACCTCC RKSRCTYKSACTMCCKCCTSTCYCTCCMCMCCKMC Direction: Forward Position #: 16 Overlap #: 19 Alignment: RKSRCTYKSACTMCCTYBYGMYTYMKCCYCCMGA- ---------------GCCTCTCCCTCCACACCTCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 1 Combined Motif Original Motif Reverse Complement RKSRCTYKSACTMCCKCCTSTCYCTCCMCMCCKMC BCVTCTGTCACCCC RKSRCTYKSACTMCCBCVTCTSYCACCCCMCCKMC Direction: Forward Position #: 16 Overlap #: 14 Alignment: RKSRCTYKSACTMCCKCCTSTCYCTCCMCMCCKMC ---------------BCVTCTGTCACCCC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 4 Combined Motif Original Motif Reverse Complement RKSRCTYKSACTMCCBCVTCTSYCACCCCMCCKMC CCTGTAATCCCAGC RKSRCTYKSACTMCCBCTKYWVTCMCMSCMCCKMC Direction: Forward Position #: 16 Overlap #: 14 Alignment: RKSRCTYKSACTMCCBCVTCTSYCACCCCMCCKMC ---------------CCTGTAATCCCAGC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 143 Combined Motif Original Motif Original Motif RKSRCTYKSACTMCCBCTKYWVTCMCMSCMCCKMC CTGCGTCGCTCAC RKSRCTYKSACTMCCCYGBGTCKCTCACCMCCKMC Direction: Forward Position #: 16 Overlap #: 13 Alignment: RKSRCTYKSACTMCCBCTKYWVTCMCMSCMCCKMC ---------------CTGCGTCGCTCAC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 177 Combined Motif Original Motif Reverse Complement RKSRCTYKSACTMCCCYGBGTCKCTCACCMCCKMC ACCGAGMKMGCAGCTTCGGG RKSRCTYKSACTMCCMCBBRKCKCKCAGCHYCKVS Direction: Forward Position #: 16 Overlap #: 20 Alignment: RKSRCTYKSACTMCCCYGBGTCKCTCACCMCCKMC ---------------ACCGAGMKMGCAGCTTCGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 209 Combined Motif Reverse Complement Reverse Complement SVYGMHGCTGRGYGYKBBGRGGRAGTSRMAGKSYK ATGGGCTGACAG SVYGMHGCTGRGYGYATGGGSKGASAGRMAGKSYK Direction: Forward Position #: 16 Overlap #: 12 Alignment: SVYGMHGCTGRGYGYKBBGRGGRAGTSRMAGKSYK ---------------ATGGGCTGACAG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 135 Combined Motif Original Motif Reverse Complement SVYGMHGCTGRGYGYATGGGSKGASAGRMAGKSYK CTGGGCAACAAGAG SVYGMHGCTGRGYGYMTGGGCDRMMAGAVAGKSYK Direction: Forward Position #: 16 Overlap #: 14 Alignment: SVYGMHGCTGRGYGYATGGGSKGASAGRMAGKSYK ---------------CTGGGCAACAAGAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 284 Combined Motif Reverse Complement Reverse Complement RKSRCTVTCTYRKDGCCCARKCKCKCAGCHYCKVS TCAATGGGCTCCCAAATG RKSRCTVTCTYRKDGYCMATGVGCTCMCMWHYGVS Direction: Forward Position #: 16 Overlap #: 18 Alignment: RKSRCTVTCTYRKDGCCCARKCKCKCAGCHYCKVS ---------------TCAATGGGCTCCCAAATG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 175 Combined Motif Reverse Complement Original Motif SVCMHWYGRGAGCVCATYGMCDRMMAGAVAGKSYK AGCTAGAYACAGAGTGC SVCMHWYGRGAGCVCAKCKASAHACAGAGWGBSYK Direction: Forward Position #: 16 Overlap #: 17 Alignment: SVCMHWYGRGAGCVCATYGMCDRMMAGAVAGKSYK ---------------AGCTAGAYACAGAGTGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 164 Reverse Complement Original Motif RKSBCWCTCTGTHTSTRGYTGVGCTCMCMWHYGVS AGCCCCGGTTCCCGCYCGC AGCCCCGGTTCCCKCTSKCTSTRGYTGVGCTCMCMWHYGVS Direction: Forward Position #: 7 Overlap #: 13 Alignment: ------RKSBCWCTCTGTHTSTRGYTGVGCTCMCMWHYGVS AGCCCCGGTTCCCGCYCGC---------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 205 Combined Motif Reverse Complement Reverse Complement SVCMHWYGRGAGCVCAKCKASAGYSAGYGGGAACCGGGGCT TGGGCTGCCAGATG SVCMHWYGRGAGCVCAKCTRGRCTGMSMGAKRACCGGGGCT Direction: Forward Position #: 19 Overlap #: 14 Alignment: SVCMHWYGRGAGCVCAKCKASAGYSAGYGGGAACCGGGGCT ------------------TGGGCTGCCAGATG--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 220 Combined Motif Original Motif Reverse Complement SVCMHWYGRGAGCVCAKCTRGRCTGMSMGAKRACCGGGGCT GTGGGTGCAGTGCA SVCMHWYGRGAGCVCAKCKDGGSTGCMVKGCAACCGGGGCT Direction: Forward Position #: 19 Overlap #: 14 Alignment: SVCMHWYGRGAGCVCAKCTRGRCTGMSMGAKRACCGGGGCT ------------------GTGGGTGCAGTGCA--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 69 Combined Motif Original Motif Reverse Complement SVCMHWYGRGAGCVCAKCKDGGSTGCMVKGCAACCGGGGCT TGTAKTCCCAGCTAC SVCMHWYGRGAGCVCAKCKKKRKTSCMAGSTACCCGGGGCT Direction: Forward Position #: 19 Overlap #: 15 Alignment: SVCMHWYGRGAGCVCAKCKDGGSTGCMVKGCAACCGGGGCT ------------------TGTAKTCCCAGCTAC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 293 Combined Motif Original Motif Original Motif SVCMHWYGRGAGCVCAKCKKKRKTSCMAGSTACCCGGGGCT CTGACTGGGAGACACCTCCC SVCMHWYGRGAGCVCAKCYTGACTGSSAGVYACCYCSSGCT Direction: Forward Position #: 19 Overlap #: 20 Alignment: SVCMHWYGRGAGCVCAKCKKKRKTSCMAGSTACCCGGGGCT ------------------CTGACTGGGAGACACCTCCC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 345 Combined Motif Reverse Complement Reverse Complement AGCSSGKGGTKBCTSSCAGTCAKGYTGVGCTCMCMWHYGVS GTTGGATTCCCAG AGCSSGKGGTKBCTSSCAGTTGGRTTSCVMKCMCMWHYGVS Direction: Forward Position #: 19 Overlap #: 13 Alignment: AGCSSGKGGTKBCTSSCAGTCAKGYTGVGCTCMCMWHYGVS ------------------GTTGGATTCCCAG---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 92 Combined Motif Original Motif Original Motif AGCSSGKGGTKBCTSSCAGTTGGRTTSCVMKCMCMWHYGVS GGGGGCTGACCCCCCCACC AGCSSGKGGTKBCTSSCAGKKGGMTKACCCSCCCAMCYGVS Direction: Forward Position #: 19 Overlap #: 19 Alignment: AGCSSGKGGTKBCTSSCAGTTGGRTTSCVMKCMCMWHYGVS ------------------GGGGGCTGACCCCCCCACC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 96 Combined Motif Original Motif Reverse Complement AGCSSGKGGTKBCTSSCAGKKGGMTKACCCSCCCAMCYGVS GGAGCCGGCTCCCTCAGCTT AGCSSGKGGTKBCTSSCAGGAGSCKGCYCCCYCMRCYTGVS Direction: Forward Position #: 19 Overlap #: 20 Alignment: AGCSSGKGGTKBCTSSCAGKKGGMTKACCCSCCCAMCYGVS ------------------GGAGCCGGCTCCCTCAGCTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 85 Combined Motif Original Motif Original Motif AGCSSGKGGTKBCTSSCAGGAGSCKGCYCCCYCMRCYTGVS CTAGACATAAAGGTTCTCCA AGCSSGKGGTKBCTSSCASKAGACDKAWMSSYYCDCCWGVS Direction: Forward Position #: 19 Overlap #: 20 Alignment: AGCSSGKGGTKBCTSSCAGGAGSCKGCYCCCYCMRCYTGVS ------------------CTAGACATAAAGGTTCTCCA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 178 Combined Motif Reverse Complement Reverse Complement SVCWGGDGMMSSYWTRDGTCTRSTGSSAGVYACCYCSSGCT ATGTGGAGGTGGAAGACAGT SVCWGGDGMABGTKKAGGTSKAVKRCRRKVYACCYCSSGCT Direction: Forward Position #: 10 Overlap #: 20 Alignment: SVCWGGDGMMSSYWTRDGTCTRSTGSSAGVYACCYCSSGCT ---------ATGTGGAGGTGGAAGACAGT------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 46 Combined Motif Original Motif Reverse Complement SVCWGGDGMABGTKKAGGTSKAVKRCRRKVYACCYCSSGCT TGGGGGWGGGG SVCWGGDGMABGTKKAGGTGGRGKASGGGVYACCYCSSGCT Direction: Forward Position #: 19 Overlap #: 11 Alignment: SVCWGGDGMABGTKKAGGTSKAVKRCRRKVYACCYCSSGCT ------------------TGGGGGWGGGG------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 108 Combined Motif Original Motif Reverse Complement SVCWGGDGMABGTKKAGGTGGRGKASGGGVYACCYCSSGCT GCGCTCKTCGGGGAGGCTCG SVCWGGDGMABGTKKAGGKSGVKBDKVGGGSASSCTCSGCT Direction: Forward Position #: 19 Overlap #: 20 Alignment: SVCWGGDGMABGTKKAGGTGGRGKASGGGVYACCYCSSGCT ------------------GCGCTCKTCGGGGAGGCTCG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 58 Combined Motif Reverse Complement Original Motif AGCSGAGSSTSCCCVRHBRVCSYCCTYYACVTYCDCCWGVS ATGGACAYTTRGGTTGHTTC AGCSGAGSSTSCCCVRHBABSGHCMTYTASGTTSDYYHGVS Direction: Forward Position #: 19 Overlap #: 20 Alignment: AGCSGAGSSTSCCCVRHBRVCSYCCTYYACVTYCDCCWGVS ------------------ATGGACAYTTRGGTTGHTTC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 357 Combined Motif Reverse Complement Reverse Complement SVCDMMDSAACSTAMAYGHCSVTBDKVGGGSASSCTCSGCT TAATTTTATGTGTCAACTTG SVCDMMDSAACSTAMAYGTMVDTTTHBGKGTMRVCTYGGCT Direction: Forward Position #: 19 Overlap #: 20 Alignment: SVCDMMDSAACSTAMAYGHCSVTBDKVGGGSASSCTCSGCT ------------------TAATTTTATGTGTCAACTTG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 312 Combined Motif Original Motif Original Motif SVCDMMDSAACSTAMAYGTMVDTTTHBGKGTMRVCTYGGCT AGGACTGAGGGTGCCYRGGG SVCDMMDSAACSTAMAYGWRGAYTGAGGGKKCCHVKGGGCT Direction: Forward Position #: 19 Overlap #: 20 Alignment: SVCDMMDSAACSTAMAYGTMVDTTTHBGKGTMRVCTYGGCT ------------------AGGACTGAGGGTGCCYRGGG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 291 Combined Motif Reverse Complement Original Motif AGCCCYVDGGYRCCCTCAKTCMWCMTYTASGTTSDYYHGVS CTGAGGACCTGAGGTCRTA AGCCCYVDGGYRCCCTCACTSAKSACCTRRGKTCDTWHGVS Direction: Forward Position #: 19 Overlap #: 19 Alignment: AGCCCYVDGGYRCCCTCAKTCMWCMTYTASGTTSDYYHGVS ------------------CTGAGGACCTGAGGTCRTA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 301 Combined Motif Original Motif Reverse Complement AGCCCYVDGGYRCCCTCACTSAKSACCTRRGKTCDTWHGVS GTCTGGMGTCTTGG AGCCCYVDGGYRCCCTCAGTCWGGASYYKWGGTCDTWHGVS Direction: Forward Position #: 19 Overlap #: 14 Alignment: AGCCCYVDGGYRCCCTCACTSAKSACCTRRGKTCDTWHGVS ------------------GTCTGGMGTCTTGG--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 17 Combined Motif Reverse Complement Reverse Complement SVCDWADGACCWRKMSTCCWGACTGAGGGKKCCHVKGGGCT TGHCCTGCKCCCACTGTCT SVCDWADGACCWRKMSTCYGBMCTGMKSSYRCYGTCKGGCT Direction: Forward Position #: 19 Overlap #: 19 Alignment: SVCDWADGACCWRKMSTCCWGACTGAGGGKKCCHVKGGGCT ------------------TGHCCTGCKCCCACTGTCT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 356 Combined Motif Original Motif Reverse Complement SVCDWADGACCWRKMSTCYGBMCTGMKSSYRCYGTCKGGCT CAGTCTGTGTCTTTTAATT SVCDWADGACCWRKMSTCCAGTCTGTGBCTTYTAWTTGGCT Direction: Forward Position #: 19 Overlap #: 19 Alignment: SVCDWADGACCWRKMSTCYGBMCTGMKSSYRCYGTCKGGCT ------------------CAGTCTGTGTCTTTTAATT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 32 Combined Motif Reverse Complement Reverse Complement AGCCAAWTAMAAGVCACAGACTGGASYYKWGGTCDTWHGVS GGGTTTCACCAT AGCCAAWTAMAAGVCACAGGSTKKMVCCWTGGTCDTWHGVS Direction: Forward Position #: 19 Overlap #: 12 Alignment: AGCCAAWTAMAAGVCACAGACTGGASYYKWGGTCDTWHGVS ------------------GGGTTTCACCAT----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 88 Combined Motif Original Motif Reverse Complement AGCCAAWTAMAAGVCACAGGSTKKMVCCWTGGTCDTWHGVS TGCAGCCCCGGT AGCCAAWTAMAAGVCACAKGCWGCCCCSGTGGTCDTWHGVS Direction: Forward Position #: 19 Overlap #: 12 Alignment: AGCCAAWTAMAAGVCACAGGSTKKMVCCWTGGTCDTWHGVS ------------------TGCAGCCCCGGT----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 56 Combined Motif Original Motif Reverse Complement AGCCAAWTAMAAGVCACAKGCWGCCCCSGTGGTCDTWHGVS GCCKGGMKCMGTGGCTCAKG AGCCAAWTAMAAGVCACAGSCDGSCBCVGTGGYYCWDBGVS Direction: Forward Position #: 19 Overlap #: 20 Alignment: AGCCAAWTAMAAGVCACAKGCWGCCCCSGTGGTCDTWHGVS ------------------GCCKGGMKCMGTGGCTCAKG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 290 Combined Motif Original Motif Reverse Complement AGCCAAWTAMAAGVCACAGSCDGSCBCVGTGGYYCWDBGVS CTGTTTGCCTGGGTATCA AGCCAAWTAMAAGVCACASBSTKTSCCTGKGKMTCADBGVS Direction: Forward Position #: 19 Overlap #: 18 Alignment: AGCCAAWTAMAAGVCACAGSCDGSCBCVGTGGYYCWDBGVS ------------------CTGTTTGCCTGGGTATCA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 313 Combined Motif Original Motif Reverse Complement AGCCAAWTAMAAGVCACASBSTKTSCCTGKGKMTCADBGVS MGCTGAGGCAGGAG AGCCAAWTAMAAGVCACAVGCTGWGSCWGGRGMTCADBGVS Direction: Forward Position #: 19 Overlap #: 14 Alignment: AGCCAAWTAMAAGVCACASBSTKTSCCTGKGKMTCADBGVS ------------------MGCTGAGGCAGGAG--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 289 Combined Motif Reverse Complement Reverse Complement SVCBDTGAYCKCCWGSCWCAGCVTGTGBCTTYTAWTTGGCT TTTGGTGCACCCATCA SVCBDTGAYCKCCWGSCWYWKSGTGCRCCYATYAWTTGGCT Direction: Forward Position #: 19 Overlap #: 16 Alignment: SVCBDTGAYCKCCWGSCWCAGCVTGTGBCTTYTAWTTGGCT ------------------TTTGGTGCACCCATCA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 89 Combined Motif Reverse Complement Original Motif AGCCAAWTKATKGGKGCACSRWMWGSCWGGRGMTCADBGVS GGCTGCGGAGGGTGTA AGCCAAWTKATKGGKGCASGCTRHGGMRGGTGTWCADBGVS Direction: Forward Position #: 19 Overlap #: 16 Alignment: AGCCAAWTKATKGGKGCACSRWMWGSCWGGRGMTCADBGVS ------------------GGCTGCGGAGGGTGTA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 343 Combined Motif Original Motif Reverse Complement AGCCAAWTKATKGGKGCASGCTRHGGMRGGTGTWCADBGVS TGTAATCCCAG AGCCAAWTKATKGGKGCAKGYWATSSCAGGTGTWCADBGVS Direction: Forward Position #: 19 Overlap #: 11 Alignment: AGCCAAWTKATKGGKGCASGCTRHGGMRGGTGTWCADBGVS ------------------TGTAATCCCAG------------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 38 Combined Motif Original Motif Reverse Complement AGCCAAWTKATKGGKGCAKGYWATSSCAGGTGTWCADBGVS TCTMKGCTCACTGC AGCCAAWTKATKGGKGCATSTMRKCYCASKGSTWCADBGVS Direction: Forward Position #: 19 Overlap #: 14 Alignment: AGCCAAWTKATKGGKGCAKGYWATSSCAGGTGTWCADBGVS ------------------TCTMKGCTCACTGC--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 174 Combined Motif Reverse Complement Reverse Complement SVCBDTGWASCRSTGMGYMYASATGCRCCYATYAWTTGGCT ATCTGVTCACCCC SVCBDTGWASCRSTGMGYATMKRTKCACCCMTYAWTTGGCT Direction: Forward Position #: 19 Overlap #: 13 Alignment: SVCBDTGWASCRSTGMGYMYASATGCRCCYATYAWTTGGCT ------------------ATCTGVTCACCCC---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 184 Combined Motif Original Motif Original Motif SVCBDTGWASCRSTGMGYATMKRTKCACCCMTYAWTTGGCT ATATTGATGATCCTGACC SVCBDTGWASCRSTGMGYATATKKWYRMYCCTSAMYTGGCT Direction: Forward Position #: 19 Overlap #: 18 Alignment: SVCBDTGWASCRSTGMGYATMKRTKCACCCMTYAWTTGGCT ------------------ATATTGATGATCCTGACC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 187 Combined Motif Reverse Complement Original Motif AGCCAKRTSAGGMYMMWYRATATKCYCASKGSTWCADBGVS TCTCTGAGCCTCAGTT AGCCAKRTSAGGMYMMWYTMTMTGVGCMYYRSTTCADBGVS Direction: Forward Position #: 19 Overlap #: 16 Alignment: AGCCAKRTSAGGMYMMWYRATATKCYCASKGSTWCADBGVS ------------------TCTCTGAGCCTCAGTT------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 123 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 123 Motif 26 Original Motif Reverse Complement AGCAGTCTGAG TMGGGAGGCTGAGGCAGGAG TMGGGAGRSYRRKSYRRGAG Direction: Forward Position #: 8 Overlap #: 11 Alignment: -------AGCAGTCTGAG-- TMGGGAGGCTGAGGCAGGAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 165 Combined Motif Original Motif Original Motif TMGGGAGRSYRRKSYRRGAG ATCTGACAGGAGGYRGAGCT TMGGGAGRVTVDGVCAGGAGGYRGAGCT Direction: Forward Position #: 9 Overlap #: 12 Alignment: TMGGGAGRSYRRKSYRRGAG-------- --------ATCTGACAGGAGGYRGAGCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 13 Combined Motif Original Motif Reverse Complement TMGGGAGRVTVDGVCAGGAGGYRGAGCT GGCAATGCCTCGCCCTGCTT TMGGGAGRVTVDGGCARKRSSTVGMSCTGCTT Direction: Forward Position #: 13 Overlap #: 16 Alignment: TMGGGAGRVTVDGVCAGGAGGYRGAGCT---- ------------GGCAATGCCTCGCCCTGCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 67 Combined Motif Reverse Complement Original Motif AAGCAGSRCVASSMRKTGCCDVABKCTCCCRA CTGGGCTCCTGAGTCTGGTG AAGCAGSRCVASSMVTKGSCTCMTGMKYCTGRTG Direction: Forward Position #: 15 Overlap #: 18 Alignment: AAGCAGSRCVASSMRKTGCCDVABKCTCCCRA-- --------------CTGGGCTCCTGAGTCTGGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 191 Combined Motif Reverse Complement Reverse Complement CAMCAGMYYCARGAGSCYAVRSSTVGMSCTGCTT GCTGCARTCTCGGCACTTT CAMCAGMYYCARGAGGCTRCAVBYBSVGCWSYTT Direction: Forward Position #: 16 Overlap #: 19 Alignment: CAMCAGMYYCARGAGSCYAVRSSTVGMSCTGCTT ---------------GCTGCARTCTCGGCACTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 128 Combined Motif Reverse Complement Reverse Complement AAMSWGCVSVKVVTGMAGCCTCMTGMKYCTGRTG CMGCTCCGAGTGCGG AAMSWGCVSVKVVTGCMGCYYCSWGTGCSKGRTG Direction: Forward Position #: 16 Overlap #: 15 Alignment: AAMSWGCVSVKVVTGMAGCCTCMTGMKYCTGRTG ---------------CMGCTCCGAGTGCGG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 160 Combined Motif Original Motif Reverse Complement AAMSWGCVSVKVVTGCMGCYYCSWGTGCSKGRTG TACCTGAGACTGGGTAATTT AAMSWGCVSVKVVTGYASCTBMGASTGSGKRATKT Direction: Forward Position #: 16 Overlap #: 19 Alignment: AAMSWGCVSVKVVTGCMGCYYCSWGTGCSKGRTG- ---------------TACCTGAGACTGGGTAATTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 348 Combined Motif Reverse Complement Reverse Complement AYATKRCSCASTCYBAGSTMCAVBYBSVGCWSYTT CAAASCKGTCATAGGCCAT AYATKRCSCASTCYBCRVWVCRGTCAKAGSCCHTT Direction: Forward Position #: 16 Overlap #: 19 Alignment: AYATKRCSCASTCYBAGSTMCAVBYBSVGCWSYTT ---------------CAAASCKGTCATAGGCCAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 149 Combined Motif Reverse Complement Reverse Complement AAHGGSCTRTGACMGVWBKGBMGASTGSGKRATKT GGGTGCAGGMGGGCTGAGT AAHGGSCTRTGACMGGDGTGCAGRCKGGSTGAKTT Direction: Forward Position #: 16 Overlap #: 19 Alignment: AAHGGSCTRTGACMGVWBKGBMGASTGSGKRATKT ---------------GGGTGCAGGMGGGCTGAGT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 47 Combined Motif Original Motif Reverse Complement AAHGGSCTRTGACMGGDGTGCAGRCKGGSTGAKTT MGGAAACTGAGGC AAHGGSCTRTGACMGVGGWRMMKGAGGSSTGAKTT Direction: Forward Position #: 16 Overlap #: 13 Alignment: AAHGGSCTRTGACMGGDGTGCAGRCKGGSTGAKTT ---------------MGGAAACTGAGGC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 304 Combined Motif Original Motif Reverse Complement AAHGGSCTRTGACMGVGGWRMMKGAGGSSTGAKTT AGCAGYTTGGAAACACT AAHGGSCTRTGACMGAGSARHYTGRRRMCWSWKTT Direction: Forward Position #: 16 Overlap #: 17 Alignment: AAHGGSCTRTGACMGVGGWRMMKGAGGSSTGAKTT ---------------AGCAGYTTGGAAACACT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 12 Combined Motif Original Motif Reverse Complement AAHGGSCTRTGACMGAGSARHYTGRRRMCWSWKTT GTTGGCCAGGCTGGTCT AAHGGSCTRTGACMGRKTRGCCWGGVTGSTCTKTT Direction: Forward Position #: 16 Overlap #: 17 Alignment: AAHGGSCTRTGACMGAGSARHYTGRRRMCWSWKTT ---------------GTTGGCCAGGCTGGTCT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 18 Combined Motif Reverse Complement Original Motif AAYAGASCAVCCWGGCMARMCRGTCAKAGSCCHTT GAAAAGCGCAGTATTMGGG AAYAGASCAVCCWGGSAAAASBGYMRTAKTMSDKT Direction: Forward Position #: 16 Overlap #: 19 Alignment: AAYAGASCAVCCWGGCMARMCRGTCAKAGSCCHTT ---------------GAAAAGCGCAGTATTMGGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 321 Combined Motif Original Motif Reverse Complement AAYAGASCAVCCWGGSAAAASBGYMRTAKTMSDKT GCTCCACCCAGTTCGAGCTT AAYAGASCAVCCWGGGMWMMRCSCAGTWBKAGCTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAYAGASCAVCCWGGSAAAASBGYMRTAKTMSDKT ---------------GCTCCACCCAGTTCGAGCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 275 Combined Motif Reverse Complement Reverse Complement AAGCTYBWACTGSGKRRWRCCCWGGVTGSTCTKTT TTTAACTCTGTGAG AAGCTYBWACTGSGKKDTAMCYHKGTGAGTCTKTT Direction: Forward Position #: 16 Overlap #: 14 Alignment: AAGCTYBWACTGSGKRRWRCCCWGGVTGSTCTKTT ---------------TTTAACTCTGTGAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 48 Combined Motif Original Motif Reverse Complement AAGCTYBWACTGSGKKDTAMCYHKGTGAGTCTKTT CGTCGCTCACGCTGGGAGCT AAGCTYBWACTGSGKHKTMVCTCWSKSWGKSWGYT Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAGCTYBWACTGSGKKDTAMCYHKGTGAGTCTKTT ---------------CGTCGCTCACGCTGGGAGCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 254 Combined Motif Reverse Complement Reverse Complement AKCWSYCWSYSWGAGVYAYDRCSCAGTWBKAGCTT ATAGGAATGCTTGTGATTTT AKCWSYCWSYSWGAGATABGAMBSMKTDTGAKYTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: AKCWSYCWSYSWGAGVYAYDRCSCAGTWBKAGCTT ---------------ATAGGAATGCTTGTGATTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 223 Combined Motif Original Motif Original Motif AKCWSYCWSYSWGAGATABGAMBSMKTDTGAKYTT AGCCTCCYGAGTA AKCWSYCWSYSWGAGAKMCTMCYGAGTATGAKYTT Direction: Forward Position #: 16 Overlap #: 13 Alignment: AKCWSYCWSYSWGAGATABGAMBSMKTDTGAKYTT ---------------AGCCTCCYGAGTA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 96 Combined Motif Original Motif Reverse Complement AKCWSYCWSYSWGAGAKMCTMCYGAGTATGAKYTT GGAGCCGGCTCCCTCAGCTT AKCWSYCWSYSWGAGRGASYCSKCWSYMTSAGCTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: AKCWSYCWSYSWGAGAKMCTMCYGAGTATGAKYTT ---------------GGAGCCGGCTCCCTCAGCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 326 Combined Motif Reverse Complement Reverse Complement AAGCTSARKSWGYSGKSTCKCTCWSKSWGKSWGYT CCTTTGACTCCATGTC AAGCTSARKSWGYSGVCTYTSWCTCCATGTCWGYT Direction: Forward Position #: 16 Overlap #: 16 Alignment: AAGCTSARKSWGYSGKSTCKCTCWSKSWGKSWGYT ---------------CCTTTGACTCCATGTC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 95 Combined Motif Original Motif Original Motif AAGCTSARKSWGYSGVCTYTSWCTCCATGTCWGYT ACCCYGTCTGGGAGGTG AAGCTSARKSWGYSGACYCTGTCTSGRWGKYRGYT Direction: Forward Position #: 16 Overlap #: 17 Alignment: AAGCTSARKSWGYSGVCTYTSWCTCCATGTCWGYT ---------------ACCCYGTCTGGGAGGTG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 27 Combined Motif Original Motif Original Motif AAGCTSARKSWGYSGACYCTGTCTSGRWGKYRGYT CACTTCCCAGACGGGGCG AAGCTSARKSWGYSGCMCYTSYCWGRSRGGGBGYT Direction: Forward Position #: 16 Overlap #: 18 Alignment: AAGCTSARKSWGYSGACYCTGTCTSGRWGKYRGYT ---------------CACTTCCCAGACGGGGCG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 312 Combined Motif Original Motif Reverse Complement AAGCTSARKSWGYSGCMCYTSYCWGRSRGGGBGYT CCCMKGGCACCCTCAGTCCT AAGCTSARKSWGYSGCCCYKGBCASCCTSRGTSCT Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAGCTSARKSWGYSGCMCYTSYCWGRSRGGGBGYT ---------------CCCMKGGCACCCTCAGTCCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 190 Combined Motif Original Motif Reverse Complement AAGCTSARKSWGYSGCCCYKGBCASCCTSRGTSCT ATCATTCTTATGCCTTTG AAGCTSARKSWGYSGMYCATKCYWMYSYCTKTGCT Direction: Forward Position #: 16 Overlap #: 18 Alignment: AAGCTSARKSWGYSGCCCYKGBCASCCTSRGTSCT ---------------ATCATTCTTATGCCTTTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 200 Combined Motif Original Motif Original Motif AAGCTSARKSWGYSGMYCATKCYWMYSYCTKTGCT ACCCCGTCTGGGA AAGCTSARKSWGYSGACCMYGTCTGBGACTKTGCT Direction: Forward Position #: 16 Overlap #: 13 Alignment: AAGCTSARKSWGYSGMYCATKCYWMYSYCTKTGCT ---------------ACCCCGTCTGGGA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 307 Combined Motif Reverse Complement Reverse Complement AGCARAGTCBCAGACKRGGTCSKCWSYMTSAGCTT AGAGCTCTGGCTGGCATCT AGCARAGTCBCAGACRGRGYYCKGKCTGKCAKCTT Direction: Forward Position #: 16 Overlap #: 19 Alignment: AGCARAGTCBCAGACKRGGTCSKCWSYMTSAGCTT ---------------AGAGCTCTGGCTGGCATCT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 192 Combined Motif Original Motif Original Motif AGCARAGTCBCAGACRGRGYYCKGKCTGKCAKCTT GAATCCTGGGACAGCCTGT AGCARAGTCBCAGACGRAKCCYGGGMYRGCMTSTT Direction: Forward Position #: 16 Overlap #: 19 Alignment: AGCARAGTCBCAGACRGRGYYCKGKCTGKCAKCTT ---------------GAATCCTGGGACAGCCTGT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 136 Combined Motif Original Motif Original Motif AGCARAGTCBCAGACGRAKCCYGGGMYRGCMTSTT CCCTCACTGCCCGGGG AGCARAGTCBCAGACSMMTCMCKGSCCRGSVTSTT Direction: Forward Position #: 16 Overlap #: 16 Alignment: AGCARAGTCBCAGACGRAKCCYGGGMYRGCMTSTT ---------------CCCTCACTGCCCGGGG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 52 Combined Motif Reverse Complement Original Motif AASAVSCMGGSCRGYGARRSGTCTGBGACTKTGCT GACTGGCAGGCAGCTCCACC AASAVSCMGGSCRGYGACTGGCMKGCRRCTYYRCY Direction: Forward Position #: 16 Overlap #: 20 Alignment: AASAVSCMGGSCRGYGARRSGTCTGBGACTKTGCT ---------------GACTGGCAGGCAGCTCCACC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 115 Combined Motif Reverse Complement Reverse Complement MGKKKAGMKGCYYGCCAGTCMCKGSCCRGSVTSTT HAGTGGKATTGCTGGATCAT MGKKKAGMKGCYYGCHAGTSVBWKYSCKGGMTCWT Direction: Forward Position #: 16 Overlap #: 20 Alignment: MGKKKAGMKGCYYGCCAGTCMCKGSCCRGSVTSTT ---------------HAGTGGKATTGCTGGATCAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 144 Combined Motif Original Motif Original Motif MGKKKAGMKGCYYGCHAGTSVBWKYSCKGGMTCWT CCGCTGCACTGTGGGAGCCC MGKKKAGMKGCYYGCCMGYTGCACTGYGGGAKCCY Direction: Forward Position #: 16 Overlap #: 20 Alignment: MGKKKAGMKGCYYGCHAGTSVBWKYSCKGGMTCWT ---------------CCGCTGCACTGTGGGAGCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 363 Combined Motif Reverse Complement Original Motif KGGYTCCCMCAGTGCAKCRGGCMKGCRRCTYYRCY CAAGGTCTGATTGTW KGGYTCCCMCAGTGCMDMGGKCTGRYDGYTYYRCY Direction: Forward Position #: 16 Overlap #: 15 Alignment: KGGYTCCCMCAGTGCAKCRGGCMKGCRRCTYYRCY ---------------CAAGGTCTGATTGTW----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 294 Combined Motif Reverse Complement Original Motif MGKKKAKCDMKCAGRCCYDRGCACTGYGGGAKCCY AGCTGTGAGAAGAGGGCCAC MGKKKAKCDMKCAGRMSCTGKSAGWRKRGGRSCAC Direction: Forward Position #: 16 Overlap #: 20 Alignment: MGKKKAKCDMKCAGRCCYDRGCACTGYGGGAKCCY ---------------AGCTGTGAGAAGAGGGCCAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 286 Combined Motif Reverse Complement Original Motif GTGSKCCKYKWCTSRCAGSYKCTGRYDGYTYYRCY CAGGCGGCTGGGAG GTGSKCCKYKWCTSRCAGGCGSYKGGGRSTYYRCY Direction: Forward Position #: 16 Overlap #: 14 Alignment: GTGSKCCKYKWCTSRCAGSYKCTGRYDGYTYYRCY ---------------CAGGCGGCTGGGAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 43 Combined Motif Reverse Complement Original Motif MGKKKASKCCCRKSCGCCTGKSAGWRKRGGRSCAC GCCAGGCAGAGRGKCTCCT MGKKKASKCCCRKSCGCCWGGCAGAGGVGSDCCWC Direction: Forward Position #: 16 Overlap #: 19 Alignment: MGKKKASKCCCRKSCGCCTGKSAGWRKRGGRSCAC ---------------GCCAGGCAGAGRGKCTCCT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 161 Combined Motif Reverse Complement Original Motif GWGGDSCVCCTCTGCCWGGCGSYKGGGRSTYYRCY GAGGAGGRGGAGGDGGV GWGGDSCVCCTCTGCSAGGMGGHKGVGRVDSBRCY Direction: Forward Position #: 16 Overlap #: 17 Alignment: GWGGDSCVCCTCTGCCWGGCGSYKGGGRSTYYRCY ---------------GAGGAGGRGGAGGDGGV--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 45 Combined Motif Original Motif Reverse Complement GWGGDSCVCCTCTGCSAGGMGGHKGVGRVDSBRCY CACTTTCCAGACTGGGCA GWGGDSCVCCTCTGCCASKTKCCAGASKGGGCACY Direction: Forward Position #: 16 Overlap #: 18 Alignment: GWGGDSCVCCTCTGCSAGGMGGHKGVGRVDSBRCY ---------------CACTTTCCAGACTGGGCA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 163 Combined Motif Reverse Complement Reverse Complement MGTGCCCRSTCTGGRARSTGGCAGAGGVGSDCCWC GGAGCCCACGGAGG MGTGCCCRSTCTGGRRGAKSSCASRGAGGSDCCWC Direction: Forward Position #: 16 Overlap #: 14 Alignment: MGTGCCCRSTCTGGRARSTGGCAGAGGVGSDCCWC ---------------GGAGCCCACGGAGG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 301 Combined Motif Original Motif Reverse Complement MGTGCCCRSTCTGGRRGAKSSCASRGAGGSDCCWC GTCTGGMGTCTTGG MGTGCCCRSTCTGGRGKCTGGMRTSKWGGSDCCWC Direction: Forward Position #: 16 Overlap #: 14 Alignment: MGTGCCCRSTCTGGRRGAKSSCASRGAGGSDCCWC ---------------GTCTGGMGTCTTGG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 261 Combined Motif Original Motif Original Motif MGTGCCCRSTCTGGRGKCTGGMRTSKWGGSDCCWC ATCTCASAAATCACCACTA MGTGCCCRSTCTGGRRTCTSRCAHMTHRSCACYAC Direction: Forward Position #: 16 Overlap #: 19 Alignment: MGTGCCCRSTCTGGRGKCTGGMRTSKWGGSDCCWC ---------------ATCTCASAAATCACCACTA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 280 Combined Motif Original Motif Reverse Complement MGTGCCCRSTCTGGRRTCTSRCAHMTHRSCACYAC ACATCMTCTGAAATCTAGG MGTGCCCRSTCTGGRAYMTCMYMTRWAATCTMBRC Direction: Forward Position #: 16 Overlap #: 19 Alignment: MGTGCCCRSTCTGGRRTCTSRCAHMTHRSCACYAC ---------------ACATCMTCTGAAATCTAGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 270 Combined Motif Original Motif Original Motif MGTGCCCRSTCTGGRAYMTCMYMTRWAATCTMBRC CCATGATTGTRAGG MGTGCCCRSTCTGGRMCATSATHKTRARKCTMBRC Direction: Forward Position #: 16 Overlap #: 14 Alignment: MGTGCCCRSTCTGGRAYMTCMYMTRWAATCTMBRC ---------------CCATGATTGTRAGG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 39 Combined Motif Original Motif Original Motif MGTGCCCRSTCTGGRMCATSATHKTRARKCTMBRC AGGCGGCTGGGAGG MGTGCCCRSTCTGGRASRYGRYTGKGAGGCTMBRC Direction: Forward Position #: 16 Overlap #: 14 Alignment: MGTGCCCRSTCTGGRMCATSATHKTRARKCTMBRC ---------------AGGCGGCTGGGAGG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 25 Combined Motif Reverse Complement Original Motif GMBYAGCCTCYCAKMCMMSTKCCAGASKGGGCACY CATTTCCAWCTGAGGTAC GMBYAGCCTCYCAKMCAYTTYCMWSWGAGGKMMCY Direction: Forward Position #: 16 Overlap #: 18 Alignment: GMBYAGCCTCYCAKMCMMSTKCCAGASKGGGCACY ---------------CATTTCCAWCTGAGGTAC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 4 Combined Motif Reverse Complement Original Motif MGRYRCCTCWSWYGKAAMTGRYTGKGAGGCTMBRC GCTGGGATTACAGG MGRYRCCTCWSWYGKRCTKGGMTKRSAGGCTMBRC Direction: Forward Position #: 16 Overlap #: 14 Alignment: MGRYRCCTCWSWYGKAAMTGRYTGKGAGGCTMBRC ---------------GCTGGGATTACAGG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 58 Combined Motif Original Motif Original Motif MGRYRCCTCWSWYGKRCTKGGMTKRSAGGCTMBRC ATGGACAYTTRGGTTGHTTC MGRYRCCTCWSWYGKAYDGRSAYTTVRGKYKMTTC Direction: Forward Position #: 16 Overlap #: 20 Alignment: MGRYRCCTCWSWYGKRCTKGGMTKRSAGGCTMBRC ---------------ATGGACAYTTRGGTTGHTTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 245 Combined Motif Original Motif Reverse Complement MGRYRCCTCWSWYGKAYDGRSAYTTVRGKYKMTTC TTGAGGAGGCAGTCTG MGRYRCCTCWSWYGKWTGRGGAKKYAGKYTGMTTC Direction: Forward Position #: 16 Overlap #: 16 Alignment: MGRYRCCTCWSWYGKAYDGRSAYTTVRGKYKMTTC ---------------TTGAGGAGGCAGTCTG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 343 Combined Motif Original Motif Original Motif MGRYRCCTCWSWYGKWTGRGGAKKYAGKYTGMTTC CTGGGATTACA MGRYRCCTCWSWYGKHTGGGRWTRCAGKYTGMTTC Direction: Forward Position #: 16 Overlap #: 11 Alignment: MGRYRCCTCWSWYGKWTGRGGAKKYAGKYTGMTTC ---------------CTGGGATTACA--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 29 Combined Motif Original Motif Original Motif MGRYRCCTCWSWYGKHTGGGRWTRCAGKYTGMTTC CTGGGCRACAGAGYRAGACY MGRYRCCTCWSWYGKCTGGGVDWVMRRGYDRRWYY Direction: Forward Position #: 16 Overlap #: 20 Alignment: MGRYRCCTCWSWYGKHTGGGRWTRCAGKYTGMTTC ---------------CTGGGCRACAGAGYRAGACY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 176 Combined Motif Reverse Complement Reverse Complement KKWMKDKCKKYVWDVCCCAGYCMWSWGAGGKMMCY AACAACASACACTGGGGCCT KKWMKDKCKKYVWDVMMCARCMMACASWGGKRCCT Direction: Forward Position #: 16 Overlap #: 20 Alignment: KKWMKDKCKKYVWDVCCCAGYCMWSWGAGGKMMCY ---------------AACAACASACACTGGGGCCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 263 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 263 Motif 84 Reverse Complement Reverse Complement GGCAGAGCTGGG GGCACTGCTGGGGGACCCAG GGCASWGCTGGGGGACCCAG Direction: Forward Position #: 1 Overlap #: 12 Alignment: GGCAGAGCTGGG-------- GGCACTGCTGGGGGACCCAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 183 Combined Motif Reverse Complement Original Motif CTGGGTCCCCCAGCWSTGCC GCCRGCCCTGCYGGCC CTGGGTCCSCCAGCCCTGCCGGCC Direction: Forward Position #: 9 Overlap #: 12 Alignment: CTGGGTCCCCCAGCWSTGCC---- --------GCCRGCCCTGCYGGCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 78 Combined Motif Original Motif Reverse Complement CTGGGTCCSCCAGCCCTGCCGGCC CCGCGGGGCAGGGCTCG CTGGGTCCSCCMGCVSKGCMGGSCTCG Direction: Forward Position #: 11 Overlap #: 14 Alignment: CTGGGTCCSCCAGCCCTGCCGGCC--- ----------CCGCGGGGCAGGGCTCG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 26 Combined Motif Reverse Complement Original Motif CGAGSCCYGCYSVGCRGGSGGACCCAG CTCCTGCCTCAGCCTCCCRA CGAGSCCYGCYCTSCBGSCKSASCCWSCCRA Direction: Forward Position #: 12 Overlap #: 16 Alignment: CGAGSCCYGCYSVGCRGGSGGACCCAG---- -----------CTCCTGCCTCAGCCTCCCRA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 138 Combined Motif Original Motif Reverse Complement CGAGSCCYGCYCTSCBGSCKSASCCWSCCRA GGSKGATCTGGCTG CGAGSCCYGCYCTGSBGGMTCWGSCTGCCRA Direction: Forward Position #: 14 Overlap #: 14 Alignment: CGAGSCCYGCYCTSCBGSCKSASCCWSCCRA -------------GGSKGATCTGGCTG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 42 Combined Motif Reverse Complement Reverse Complement TMGGCAGSCWGAYCCBSCAGKGCMGGSCTCG GCGGCCGGGCAGAG TMGGCAGSCWGAYSCGGCMGGGCAGRGCTCG Direction: Forward Position #: 14 Overlap #: 14 Alignment: TMGGCAGSCWGAYCCBSCAGKGCMGGSCTCG -------------GCGGCCGGGCAGAG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 13 Combined Motif Original Motif Original Motif TMGGCAGSCWGAYSCGGCMGGGCAGRGCTCG AAGCAGGGCGAGGCATTGCC TMGGCAGSCWGAYRMGSMSGGSSAGGSMTYGCC Direction: Forward Position #: 14 Overlap #: 18 Alignment: TMGGCAGSCWGAYSCGGCMGGGCAGRGCTCG-- -------------AAGCAGGGCGAGGCATTGCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 12 Combined Motif Original Motif Original Motif TMGGCAGSCWGAYRMGSMSGGSSAGGSMTYGCC AGACCAGCCTGGCCAAC TMGGCAGSCWGAYRAGMCCRGCCWGGSCWMSCC Direction: Forward Position #: 15 Overlap #: 17 Alignment: TMGGCAGSCWGAYRMGSMSGGSSAGGSMTYGCC --------------AGACCAGCCTGGCCAAC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 100 Combined Motif Original Motif Reverse Complement TMGGCAGSCWGAYRAGMCCRGCCWGGSCWMSCC CGCGGCGCTTGCGGGCCAGC TMGGCAGSCWGAYRMGMSGVGCYTGSSSDCCMSC Direction: Forward Position #: 15 Overlap #: 19 Alignment: TMGGCAGSCWGAYRAGMCCRGCCWGGSCWMSCC- --------------CGCGGCGCTTGCGGGCCAGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 89 Combined Motif Original Motif Reverse Complement TMGGCAGSCWGAYRMGMSGVGCYTGSSSDCCMSC TACACCCTCCGCAGCC TMGGCAGSCWGAYRMKACRCSCTYSGCAGCCMSC Direction: Forward Position #: 16 Overlap #: 16 Alignment: TMGGCAGSCWGAYRMGMSGVGCYTGSSSDCCMSC ---------------TACACCCTCCGCAGCC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 115 Combined Motif Original Motif Original Motif TMGGCAGSCWGAYRMKACRCSCTYSGCAGCCMSC ATGATCCAGCAATYCCACTH TMGGCAGSCWGAYRMDWSAYCCWBCRMWBCCACYH Direction: Forward Position #: 16 Overlap #: 19 Alignment: TMGGCAGSCWGAYRMKACRCSCTYSGCAGCCMSC- ---------------ATGATCCAGCAATYCCACTH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 2 Combined Motif Original Motif Reverse Complement TMGGCAGSCWGAYRMDWSAYCCWBCRMWBCCACYH GCCACCAMGCCMKGCTAAT TMGGCAGSCWGAYRMKCCACCMMGCMMKGCYAVTH Direction: Forward Position #: 16 Overlap #: 19 Alignment: TMGGCAGSCWGAYRMDWSAYCCWBCRMWBCCACYH ---------------GCCACCAMGCCMKGCTAAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 52 Combined Motif Original Motif Reverse Complement TMGGCAGSCWGAYRMKCCACCMMGCMMKGCYAVTH GGTGGAGCTGCCTGCCAGTC TMGGCAGSCWGAYRMGSYRSMSCTSCCTGCCAGTC Direction: Forward Position #: 16 Overlap #: 20 Alignment: TMGGCAGSCWGAYRMKCCACCMMGCMMKGCYAVTH ---------------GGTGGAGCTGCCTGCCAGTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 65 Combined Motif Original Motif Reverse Complement TMGGCAGSCWGAYRMGSYRSMSCTSCCTGCCAGTC CGGCGCTGMGCTCGATTTCT TMGGCAGSCWGAYRMBGBVGCKSHGCYYGMYWKYY Direction: Forward Position #: 16 Overlap #: 20 Alignment: TMGGCAGSCWGAYRMGSYRSMSCTSCCTGCCAGTC ---------------CGGCGCTGMGCTCGATTTCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 321 Combined Motif Reverse Complement Original Motif MKRWMYCKMGCDSRGCVBCBYKMTCWGSCTGCCRA AAGCTCGAACTGGGTGGAGC MKRWMYCKMGCDSRGMAGCTCBAWCTGGSTGSMGM Direction: Forward Position #: 16 Overlap #: 20 Alignment: MKRWMYCKMGCDSRGCVBCBYKMTCWGSCTGCCRA ---------------AAGCTCGAACTGGGTGGAGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 235 Combined Motif Reverse Complement Original Motif RCYSCASCCAGWTBGAGCTYCKSHGCYYGMYWKYY TCCAAATGGGAGAAATTGGC RCYSCASCCAGWTBGWSCWWMTGGGMKARATTGBY Direction: Forward Position #: 16 Overlap #: 20 Alignment: RCYSCASCCAGWTBGAGCTYCKSHGCYYGMYWKYY ---------------TCCAAATGGGAGAAATTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 10 Combined Motif Original Motif Reverse Complement RCYSCASCCAGWTBGWSCWWMTGGGMKARATTGBY MCCYGGCWSMGASGSTCCT RCYSCASCCAGWTBGHCCHGRYDSVRDVGVTYSTY Direction: Forward Position #: 16 Overlap #: 19 Alignment: RCYSCASCCAGWTBGWSCWWMTGGGMKARATTGBY ---------------MCCYGGCWSMGASGSTCCT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 98 Combined Motif Original Motif Reverse Complement RCYSCASCCAGWTBGHCCHGRYDSVRDVGVTYSTY CCCACGCCCACCCGGAACT RCYSCASCCAGWTBGCCCAVGCCCACCCGGWACTY Direction: Forward Position #: 16 Overlap #: 19 Alignment: RCYSCASCCAGWTBGHCCHGRYDSVRDVGVTYSTY ---------------CCCACGCCCACCCGGAACT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 122 Combined Motif Original Motif Original Motif RCYSCASCCAGWTBGCCCAVGCCCACCCGGWACTY CCTTGGCCAGCCCAGAAAG RCYSCASCCAGWTBGCCYWGGCCMRCCCRGAAMKY Direction: Forward Position #: 16 Overlap #: 19 Alignment: RCYSCASCCAGWTBGCCCAVGCCCACCCGGWACTY ---------------CCTTGGCCAGCCCAGAAAG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 72 Combined Motif Reverse Complement Reverse Complement KYYTTCKGGGMYGGCCWMGGCBAWCTGGSTGSMGM GGCTGAGGAGTGCG KYYTTCKGGGMYGGCSGCKGMGRASTGSGTGSMGM Direction: Forward Position #: 16 Overlap #: 14 Alignment: KYYTTCKGGGMYGGCCWMGGCBAWCTGGSTGSMGM ---------------GGCTGAGGAGTGCG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 313 Combined Motif Original Motif Reverse Complement KYYTTCKGGGMYGGCSGCKGMGRASTGSGTGSMGM MGCTGAGGCAGGAG KYYTTCKGGGMYGGCVGCTGAGGMVKGMGTGSMGM Direction: Forward Position #: 16 Overlap #: 14 Alignment: KYYTTCKGGGMYGGCSGCKGMGRASTGSGTGSMGM ---------------MGCTGAGGCAGGAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 88 Combined Motif Original Motif Reverse Complement KYYTTCKGGGMYGGCVGCTGAGGMVKGMGTGSMGM TGCAGCCCCGGT KYYTTCKGGGMYGGCBGCWGMSSCGGKMGTGSMGM Direction: Forward Position #: 16 Overlap #: 12 Alignment: KYYTTCKGGGMYGGCVGCTGAGGMVKGMGTGSMGM ---------------TGCAGCCCCGGT-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 215 Combined Motif Original Motif Reverse Complement KYYTTCKGGGMYGGCBGCWGMSSCGGKMGTGSMGM GGGRSCACAGGAGCD KYYTTCKGGGMYGGCGGSAGCVCMGGDGSDGSMGM Direction: Forward Position #: 16 Overlap #: 15 Alignment: KYYTTCKGGGMYGGCBGCWGMSSCGGKMGTGSMGM ---------------GGGRSCACAGGAGCD----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 48 Combined Motif Reverse Complement Reverse Complement RCYSCDSCDCCYGBGCTSCCGCCMRCCCRGAAMKY CGTCGCTCACGCTGGGAGCT RCYSCDSCDCCYGBGCKTCBSYCAVSCYGGRAGST Direction: Forward Position #: 16 Overlap #: 20 Alignment: RCYSCDSCDCCYGBGCTSCCGCCMRCCCRGAAMKY ---------------CGTCGCTCACGCTGGGAGCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 157 Combined Motif Reverse Complement Reverse Complement ASCTMCCMGSVTGMSBGAYGCVCMGGDGSDGSMGM CCGCGCCGTGCGC ASCTMCCMGSVTGMSCSGCGCCSTGSGCSDGSMGM Direction: Forward Position #: 16 Overlap #: 13 Alignment: ASCTMCCMGSVTGMSBGAYGCVCMGGDGSDGSMGM ---------------CCGCGCCGTGCGC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 76 Combined Motif Original Motif Reverse Complement ASCTMCCMGSVTGMSCSGCGCCSTGSGCSDGSMGM CMTAGYACAGTGCCTGGCAC ASCTMCCMGSVTGMSCVKMGCMCWGBGCCTGGMRM Direction: Forward Position #: 16 Overlap #: 20 Alignment: ASCTMCCMGSVTGMSCSGCGCCSTGSGCSDGSMGM ---------------CMTAGYACAGTGCCTGGCAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 149 Combined Motif Reverse Complement Original Motif RKRCCAGGCVCWGYGCYYVGSYCAVSCYGGRAGST ACTCAGCCCRCCTGCACCC RKRCCAGGCVCWGYGMCTCRGCCMRCCTGSAMCCT Direction: Forward Position #: 16 Overlap #: 19 Alignment: RKRCCAGGCVCWGYGCYYVGSYCAVSCYGGRAGST ---------------ACTCAGCCCRCCTGCACCC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 43 Combined Motif Original Motif Original Motif RKRCCAGGCVCWGYGMCTCRGCCMRCCTGSAMCCT GCCAGGCAGAGRGKCTCCT RKRCCAGGCVCWGYGRCYMGGCMGASSBGCWCCYT Direction: Forward Position #: 16 Overlap #: 19 Alignment: RKRCCAGGCVCWGYGMCTCRGCCMRCCTGSAMCCT ---------------GCCAGGCAGAGRGKCTCCT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 125 Combined Motif Original Motif Original Motif RKRCCAGGCVCWGYGRCYMGGCMGASSBGCWCCYT CGCCCGGCCAGCCGC RKRCCAGGCVCWGYGCSCCSGSCCAGCCGCWCCYT Direction: Forward Position #: 16 Overlap #: 15 Alignment: RKRCCAGGCVCWGYGRCYMGGCMGASSBGCWCCYT ---------------CGCCCGGCCAGCCGC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 144 Combined Motif Original Motif Original Motif RKRCCAGGCVCWGYGCSCCSGSCCAGCCGCWCCYT CCGCTGCACTGTGGGAGCCC RKRCCAGGCVCWGYGCCSCTGCMCWGYSGSASCCY Direction: Forward Position #: 16 Overlap #: 20 Alignment: RKRCCAGGCVCWGYGCSCCSGSCCAGCCGCWCCYT ---------------CCGCTGCACTGTGGGAGCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 161 Combined Motif Reverse Complement Original Motif KGGSTSCSMCWGYGCAGSGGCMCWGBGCCTGGMRM GAGGAGGRGGAGGDGGV KGGSTSCSMCWGYGCRRGGRSRVDGHGSVKGGMRM Direction: Forward Position #: 16 Overlap #: 17 Alignment: KGGSTSCSMCWGYGCAGSGGCMCWGBGCCTGGMRM ---------------GAGGAGGRGGAGGDGGV--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 192 Combined Motif Reverse Complement Reverse Complement RKRCCRVSCHCHVMSKCCMMGCMCWGYSGSASCCY ACAGGCTGTCCCAGGATTC RKRCCRVSCHCHVMSACMSSSYRYHSCRGGATYCY Direction: Forward Position #: 16 Overlap #: 19 Alignment: RKRCCRVSCHCHVMSKCCMMGCMCWGYSGSASCCY ---------------ACAGGCTGTCCCAGGATTC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 62 Combined Motif Original Motif Original Motif RKRCCRVSCHCHVMSACMSSSYRYHSCRGGATYCY AGGAACAGCTCCRGTCTAC RKRCCRVSCHCHVMSASGAACHGCTCCRGKMTHCY Direction: Forward Position #: 16 Overlap #: 19 Alignment: RKRCCRVSCHCHVMSACMSSSYRYHSCRGGATYCY ---------------AGGAACAGCTCCRGTCTAC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 331 Combined Motif Reverse Complement Original Motif KGHARRCKGGAGCHGTTCSTSRVDGHGSVKGGMRM CCACCACAGCTCAAGGAGGC KGHARRCKGGAGCHGYYACYVCAGSTSAAGGASGC Direction: Forward Position #: 16 Overlap #: 20 Alignment: KGHARRCKGGAGCHGTTCSTSRVDGHGSVKGGMRM ---------------CCACCACAGCTCAAGGAGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 178 Combined Motif Reverse Complement Original Motif GCSTCCTTSASCTGBKGTKKCHGCTCCRGKMTHCY ACTGTCTTCCACCTCCACAT GCSTCCTTSASCTGBDSTGTCTKCYMCMKYCWCMY Direction: Forward Position #: 16 Overlap #: 20 Alignment: GCSTCCTTSASCTGBKGTKKCHGCTCCRGKMTHCY ---------------ACTGTCTTCCACCTCCACAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 61 Combined Motif Reverse Complement Reverse Complement MRGWGKYRGYKGRAGACASDVCAGSTSAAGGASGC TGGCTTCACCCAGTGGATCC MRGWGKYRGYKGRAGWSRCTTCASCHAGWGGATSC Direction: Forward Position #: 16 Overlap #: 20 Alignment: MRGWGKYRGYKGRAGACASDVCAGSTSAAGGASGC ---------------TGGCTTCACCCAGTGGATCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 18 Combined Motif Reverse Complement Reverse Complement GSATCCWCTDGSTGAAGMSWCTKCYMCMKYCWCMY CCCYAATACTGCGCTTTTC GSATCCWCTDGSTGAMSCYAMTACTGCVCTYTTCY Direction: Forward Position #: 16 Overlap #: 19 Alignment: GSATCCWCTDGSTGAAGMSWCTKCYMCMKYCWCMY ---------------CCCYAATACTGCGCTTTTC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 339 Combined Motif Original Motif Original Motif GSATCCWCTDGSTGAMSCYAMTACTGCVCTYTTCY CTCACCTCCTGC GSATCCWCTDGSTGACYCHMCTMCTGCVCTYTTCY Direction: Forward Position #: 16 Overlap #: 12 Alignment: GSATCCWCTDGSTGAMSCYAMTACTGCVCTYTTCY ---------------CTCACCTCCTGC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 312 Combined Motif Original Motif Reverse Complement GSATCCWCTDGSTGACYCHMCTMCTGCVCTYTTCY CCCMKGGCACCCTCAGTCCT GSATCCWCTDGSTGACCCMBSKCMYSCTCWKTCCT Direction: Forward Position #: 16 Overlap #: 20 Alignment: GSATCCWCTDGSTGACYCHMCTMCTGCVCTYTTCY ---------------CCCMKGGCACCCTCAGTCCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 221 Combined Motif Original Motif Reverse Complement GSATCCWCTDGSTGACCCMBSKCMYSCTCWKTCCT GTGTCCCCTTCCTCCC GSATCCWCTDGSTGASYSHCCBCWTCCTCCCTCCT Direction: Forward Position #: 16 Overlap #: 16 Alignment: GSATCCWCTDGSTGACCCMBSKCMYSCTCWKTCCT ---------------GTGTCCCCTTCCTCCC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 111 Combined Motif Original Motif Original Motif GSATCCWCTDGSTGASYSHCCBCWTCCTCCCTCCT AGGAGCCCCTCHGCCCR GSATCCWCTDGSTGAAKGASCCCYTCCKCCCWCCT Direction: Forward Position #: 16 Overlap #: 17 Alignment: GSATCCWCTDGSTGASYSHCCBCWTCCTCCCTCCT ---------------AGGAGCCCCTCHGCCCR--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 299 Combined Motif Reverse Complement Original Motif AGGWGGGYGGAKGGGSTCYTTCASCHAGWGGATSC CCCTGCTAGAACCTCCAA AGGWGGGYGGAKGGGCYCTGYYAGMAMSTSSAWSC Direction: Forward Position #: 16 Overlap #: 18 Alignment: AGGWGGGYGGAKGGGSTCYTTCASCHAGWGGATSC ---------------CCCTGCTAGAACCTCCAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 64 Combined Motif Reverse Complement Original Motif GSWTSSASRTYCTMKCAGKGCCCYTCCKCCCWCCT GAAGGCAGCTAAGGCCCGGY GSWTSSASRTYCTMKSARGGCMSCTMMGSCCHBSY Direction: Forward Position #: 16 Overlap #: 20 Alignment: GSWTSSASRTYCTMKCAGKGCCCYTCCKCCCWCCT ---------------GAAGGCAGCTAAGGCCCGGY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 30 Combined Motif Original Motif Original Motif GSWTSSASRTYCTMKSARGGCMSCTMMGSCCHBSY AGGAGCGCCTCTKCCCGGC GSWTSSASRTYCTMKRRGRGCRCCTCWKCCCVGCY Direction: Forward Position #: 16 Overlap #: 19 Alignment: GSWTSSASRTYCTMKSARGGCMSCTMMGSCCHBSY ---------------AGGAGCGCCTCTKCCCGGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 196 Combined Motif Reverse Complement Reverse Complement MGCVGGGYWGAGGMGCKCMKYYAGMAMSTSSAWSC CAAGCCTSKGCAATGGCAGG MGCVGGGYWGAGGMGCAMSCCTVGGMAATGGMAGS Direction: Forward Position #: 16 Overlap #: 20 Alignment: MGCVGGGYWGAGGMGCKCMKYYAGMAMSTSSAWSC ---------------CAAGCCTSKGCAATGGCAGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 177 Combined Motif Reverse Complement Original Motif SCTRCCATTRCCBAGGSYTGCRCCTCWKCCCVGCY CCCGAAGCTGCRYRCTCGGT SCTRCCATTRCCBAGSCYKRMGCYKCDBSCYBGST Direction: Forward Position #: 16 Overlap #: 20 Alignment: SCTRCCATTRCCBAGGSYTGCRCCTCWKCCCVGCY ---------------CCCGAAGCTGCRYRCTCGGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 306 Combined Motif Original Motif Original Motif SCTRCCATTRCCBAGSCYKRMGCYKCDBSCYBGST GACATGAGCTGGCGCTTG SCTRCCATTRCCBAGGMCADVRSCTSGCGCTTGST Direction: Forward Position #: 16 Overlap #: 18 Alignment: SCTRCCATTRCCBAGSCYKRMGCYKCDBSCYBGST ---------------GACATGAGCTGGCGCTTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 95 Combined Motif Original Motif Original Motif SCTRCCATTRCCBAGGMCADVRSCTSGCGCTTGST ACCCYGTCTGGGAGGTG SCTRCCATTRCCBAGRCCMHGWCYKGGMGSTKGST Direction: Forward Position #: 16 Overlap #: 17 Alignment: SCTRCCATTRCCBAGGMCADVRSCTSGCGCTTGST ---------------ACCCYGTCTGGGAGGTG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 96 Combined Motif Reverse Complement Original Motif ASCYASCYCCYMGWCHRGGKCTVGGMAATGGMAGS AAGCTGAGGGAGCCGGCTCC ASCYASCYCCYMGWCAAGSTSWGGGARCYGGCWSC Direction: Forward Position #: 16 Overlap #: 20 Alignment: ASCYASCYCCYMGWCHRGGKCTVGGMAATGGMAGS ---------------AAGCTGAGGGAGCCGGCTCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 170 Combined Motif Reverse Complement Original Motif GSWGCCMGMTCCCWSASCTTGWCYKGGMGSTKGST AATCAACCCTGGYRATCAAT GSWGCCMGMTCCCWSAAYYWRHCCTGGHGMTSRRT Direction: Forward Position #: 16 Overlap #: 20 Alignment: GSWGCCMGMTCCCWSASCTTGWCYKGGMGSTKGST ---------------AATCAACCCTGGYRATCAAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 156 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 156 Motif 27 Original Motif Original Motif CACTTCCCAGAC CACTTCCCAGACGGGGCG GGGGCGCACTTCCCAGAC Direction: Backward Position #: 7 Overlap #: 12 Alignment: CACTTCCCAGAC------ CACTTCCCAGACGGGGCG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 95 Combined Motif Reverse Complement Reverse Complement GTCTGGGAAGTGCGCCCC CACCTCCCAGACMGGGT GTCTGGGMASYKCSCMSMCMGGGT Direction: Forward Position #: 8 Overlap #: 11 Alignment: GTCTGGGAAGTGCGCCCC------ -------CACCTCCCAGACMGGGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 45 Combined Motif Original Motif Original Motif GTCTGGGMASYKCSCMSMCMGGGT TGCCCAGTCTGGAAAGTG GTCTGGGMASTGCCCAGTCTGGRWAGTG Direction: Forward Position #: 11 Overlap #: 14 Alignment: GTCTGGGMASYKCSCMSMCMGGGT---- ----------TGCCCAGTCTGGAAAGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 74 Combined Motif Original Motif Original Motif GTCTGGGMASTGCCCAGTCTGGRWAGTG CACTTCCTAGATGG GTCTGGGMASTGCMCWKCCTRGRTRGTG Direction: Forward Position #: 13 Overlap #: 14 Alignment: GTCTGGGMASTGCCCAGTCTGGRWAGTG ------------CACTTCCTAGATGG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 72 Combined Motif Original Motif Original Motif GTCTGGGMASTGCMCWKCCTRGRTRGTG CGCACTCCTCAGCC GTCTGGGMASTGCGCAYTCYTSAKMSTG Direction: Forward Position #: 13 Overlap #: 14 Alignment: GTCTGGGMASTGCMCWKCCTRGRTRGTG ------------CGCACTCCTCAGCC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 309 Combined Motif Original Motif Reverse Complement GTCTGGGMASTGCGCAYTCYTSAKMSTG MTCCTCCAGACCCCAGAATG GTCTGGGMASTGMKCMTYCMGMMBCCWGAATG Direction: Forward Position #: 13 Overlap #: 16 Alignment: GTCTGGGMASTGCGCAYTCYTSAKMSTG---- ------------MTCCTCCAGACCCCAGAATG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 16 Combined Motif Reverse Complement Original Motif CATTCWGGBYYCYGKARGRRCASTYCCCAGAC GAAAGGGAACTCCCTGACCC CATTCWGGBYYCYGGAARGGSAMYTCCCWGACCC Direction: Forward Position #: 15 Overlap #: 18 Alignment: CATTCWGGBYYCYGKARGRRCASTYCCCAGAC-- --------------GAAAGGGAACTCCCTGACCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 15 Combined Motif Reverse Complement Original Motif GGGTCWGGGAMYTSCCKTTCCMGMMBCCWGAATG CTTGCGCTTCCCRRGTGA GGGTCWGGGAMYTSCCTTKCSCTHCCCVWGWRWG Direction: Forward Position #: 16 Overlap #: 18 Alignment: GGGTCWGGGAMYTSCCKTTCCMGMMBCCWGAATG ---------------CTTGCGCTTCCCRRGTGA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 277 Combined Motif Original Motif Reverse Complement GGGTCWGGGAMYTSCCTTKCSCTHCCCVWGWRWG GCTTCTGGTGAGGGC GGGTCWGGGAMYTSCSYTTCBSKTSMSGGSWRWG Direction: Forward Position #: 16 Overlap #: 15 Alignment: GGGTCWGGGAMYTSCCTTKCSCTHCCCVWGWRWG ---------------GCTTCTGGTGAGGGC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 155 Combined Motif Original Motif Reverse Complement GGGTCWGGGAMYTSCSYTTCBSKTSMSGGSWRWG GCCKCCCCGTCCGGGAGGGA GGGTCWGGGAMYTSCGCYKCCCBKKCCGGGAGRGA Direction: Forward Position #: 16 Overlap #: 19 Alignment: GGGTCWGGGAMYTSCSYTTCBSKTSMSGGSWRWG- ---------------GCCKCCCCGTCCGGGAGGGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 136 Combined Motif Original Motif Original Motif GGGTCWGGGAMYTSCGCYKCCCBKKCCGGGAGRGA CCCTCACTGCCCGGGG GGGTCWGGGAMYTSCSCCTCMCTGCCCGGGRGRGA Direction: Forward Position #: 16 Overlap #: 16 Alignment: GGGTCWGGGAMYTSCGCYKCCCBKKCCGGGAGRGA ---------------CCCTCACTGCCCGGGG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 202 Combined Motif Original Motif Reverse Complement GGGTCWGGGAMYTSCSCCTCMCTGCCCGGGRGRGA GAAACTGCTTTGTGATGTGT GGGTCWGGGAMYTSCGMMWCWSYKYYSKGRTGTGW Direction: Forward Position #: 16 Overlap #: 20 Alignment: GGGTCWGGGAMYTSCSCCTCMCTGCCCGGGRGRGA ---------------GAAACTGCTTTGTGATGTGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 153 Combined Motif Original Motif Reverse Complement GGGTCWGGGAMYTSCGMMWCWSYKYYSKGRTGTGW GGCACTCCCTAGTG GGGTCWGGGAMYTSCGGCACTSCYTAGTGRTGTGW Direction: Forward Position #: 16 Overlap #: 14 Alignment: GGGTCWGGGAMYTSCGMMWCWSYKYYSKGRTGTGW ---------------GGCACTCCCTAGTG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 260 Combined Motif Original Motif Original Motif GGGTCWGGGAMYTSCGGCACTSCYTAGTGRTGTGW GGTGCCCCTCTGGGACRAA GGGTCWGGGAMYTSCGGYRCYCCTYTGKGAYGWRW Direction: Forward Position #: 16 Overlap #: 19 Alignment: GGGTCWGGGAMYTSCGGCACTSCYTAGTGRTGTGW ---------------GGTGCCCCTCTGGGACRAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 294 Combined Motif Reverse Complement Reverse Complement WKWCMTCYCAKAGGMGKMCCGSAMYTCCCWGACCC GTGGCCCTCTTCTCACAGCT WKWCMTCYCAKAGGMGTVSCSCWCTTCYCASASCY Direction: Forward Position #: 16 Overlap #: 20 Alignment: WKWCMTCYCAKAGGMGKMCCGSAMYTCCCWGACCC ---------------GTGGCCCTCTTCTCACAGCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 196 Combined Motif Reverse Complement Reverse Complement MGSTSTGMGAAGWGSGSVACYCCTYTGKGAYGWRW CAAGCCTSKGCAATGGCAGG MGSTSTGMGAAGWGSSMARCCYCKSYRAKRGSAGD Direction: Forward Position #: 16 Overlap #: 20 Alignment: MGSTSTGMGAAGWGSGSVACYCCTYTGKGAYGWRW ---------------CAAGCCTSKGCAATGGCAGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 42 Combined Motif Original Motif Reverse Complement MGSTSTGMGAAGWGSSMARCCYCKSYRAKRGSAGD GCGGCCGGGCAGAG MGSTSTGMGAAGWGSGCRGCCKSGCAGAGRGSAGD Direction: Forward Position #: 16 Overlap #: 14 Alignment: MGSTSTGMGAAGWGSSMARCCYCKSYRAKRGSAGD ---------------GCGGCCGGGCAGAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 191 Combined Motif Reverse Complement Reverse Complement HCTSCMCTCTGCSYGGCMGCSCWCTTCYCASASCY GCTGCARTCTCGGCACTTT HCTSCMCTCTGCSYGGCYGCAVTCTYSKCACWTYY Direction: Forward Position #: 16 Overlap #: 19 Alignment: HCTSCMCTCTGCSYGGCMGCSCWCTTCYCASASCY ---------------GCTGCARTCTCGGCACTTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 108 Combined Motif Reverse Complement Original Motif MMAWGTGYSMAGAVTGCMGCCKSGCAGAGRGSAGD CGAGCCTCCCCGAYGAGCGC MMAWGTGYSMAGAVTSSAGCCTCSCMGABGRGMGB Direction: Forward Position #: 16 Overlap #: 20 Alignment: MMAWGTGYSMAGAVTGCMGCCKSGCAGAGRGSAGD ---------------CGAGCCTCCCCGAYGAGCGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 89 Combined Motif Original Motif Reverse Complement MMAWGTGYSMAGAVTSSAGCCTCSCMGABGRGMGB TACACCCTCCGCAGCC MMAWGTGYSMAGAVTKAMRCCYYCCVSAGSMGMGB Direction: Forward Position #: 16 Overlap #: 16 Alignment: MMAWGTGYSMAGAVTSSAGCCTCSCMGABGRGMGB ---------------TACACCCTCCGCAGCC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 160 Combined Motif Original Motif Original Motif MMAWGTGYSMAGAVTKAMRCCYYCCVSAGSMGMGB AAATTACCCAGTCTCAGGTA MMAWGTGYSMAGAVTDAADYMCCCMGYMKCVGVKA Direction: Forward Position #: 16 Overlap #: 20 Alignment: MMAWGTGYSMAGAVTKAMRCCYYCCVSAGSMGMGB ---------------AAATTACCCAGTCTCAGGTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 122 Combined Motif Reverse Complement Reverse Complement TRVCBGRYMCYGGGRKDTTDAVTCTYSKCACWTYY CTTTCTGGGCTGGCCAAGG TRVCBGRYMCYGGGRBTTTCWGKSYTGGCMMAGKY Direction: Forward Position #: 16 Overlap #: 19 Alignment: TRVCBGRYMCYGGGRKDTTDAVTCTYSKCACWTYY ---------------CTTTCTGGGCTGGCCAAGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 347 Combined Motif Original Motif Reverse Complement TRVCBGRYMCYGGGRBTTTCWGKSYTGGCMMAGKY GTGTGCGAATAGGTGT TRVCBGRYMCYGGGRGTKTBHGAATWGGYVTAGKY Direction: Forward Position #: 16 Overlap #: 16 Alignment: TRVCBGRYMCYGGGRBTTTCWGKSYTGGCMMAGKY ---------------GTGTGCGAATAGGTGT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 301 Combined Motif Reverse Complement Original Motif MYCTAVMCCWATTCDBARACMCCCMGYMKCVGVKA CCAAGACYCCAGAC MYCTAVMCCWATTCDCMAASACYCCRGAYCVGVKA Direction: Forward Position #: 16 Overlap #: 14 Alignment: MYCTAVMCCWATTCDBARACMCCCMGYMKCVGVKA ---------------CCAAGACYCCAGAC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 234 Combined Motif Reverse Complement Reverse Complement TRVCBGKTCKGGKGTSTTRGHGAATWGGYVTAGKY GTGTCKGGAGTTTGTTCCTT TRVCBGKTCKGGKGTSTKDSBGGAKTKKBTTMSTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: TRVCBGKTCKGGKGTSTTRGHGAATWGGYVTAGKY ---------------GTGTCKGGAGTTTGTTCCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 220 Combined Motif Original Motif Reverse Complement TRVCBGKTCKGGKGTSTKDSBGGAKTKKBTTMSTT GTGGGTGCAGTGCA TRVCBGKTCKGGKGTGTGKGTGSAGTGCDTTMSTT Direction: Forward Position #: 16 Overlap #: 14 Alignment: TRVCBGKTCKGGKGTSTKDSBGGAKTKKBTTMSTT ---------------GTGGGTGCAGTGCA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 169 Combined Motif Reverse Complement Original Motif AASRAADGCACTSCACYCACACYCCRGAYCVGVKA CCCAAATCCTATAAAA AASRAADGCACTSCACCCAMAYCCYAKAMMAGVKA Direction: Forward Position #: 16 Overlap #: 16 Alignment: AASRAADGCACTSCACYCACACYCCRGAYCVGVKA ---------------CCCAAATCCTATAAAA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 14 Combined Motif Reverse Complement Original Motif TRVCTYYTRTMGGMTYTGGGTGSAGTGCDTTMSTT ACCTGGAAAATCGGGTCACT TRVCTYYTRTMGGMTAYSKGKRAARTSSGGTCMYT Direction: Forward Position #: 16 Overlap #: 20 Alignment: TRVCTYYTRTMGGMTYTGGGTGSAGTGCDTTMSTT ---------------ACCTGGAAAATCGGGTCACT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 171 Combined Motif Original Motif Reverse Complement TRVCTYYTRTMGGMTAYSKGKRAARTSSGGTCMYT ACTTTGGACTGTGGACTTTT TRVCTYYTRTMGGMTACYTKGGAMTKTGGRYYTTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: TRVCTYYTRTMGGMTAYSKGKRAARTSSGGTCMYT ---------------ACTTTGGACTGTGGACTTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 321 Combined Motif Reverse Complement Reverse Complement AAAMKKCCAYAYTCCRAMGTAYCCYAKAMMAGVKA GCTCCACCCAGTTCGAGCTT AAAMKKCCAYAYTCCGMHSYACCCWRTWMVAGCTW Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAAMKKCCAYAYTCCRAMGTAYCCYAKAMMAGVKA ---------------GCTCCACCCAGTTCGAGCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 165 Combined Motif Reverse Complement Reverse Complement WAGCTVRWAMWGGGTKSHRCGGAMTKTGGRYYTTT AGCTCMKCCTCCTGTCAGAT WAGCTVRWAMWGGGTRGCDCVGMCTBCKGTCWKWT Direction: Forward Position #: 16 Overlap #: 20 Alignment: WAGCTVRWAMWGGGTKSHRCGGAMTKTGGRYYTTT ---------------AGCTCMKCCTCCTGTCAGAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 310 Combined Motif Reverse Complement Reverse Complement AWYWGACRGBAGRCVGDGCKACCCWRTWMVAGCTW GGATTTMKGACTTGCATGGG AWYWGACRGBAGRCVGGRYTWCBSASTTGCAKGKK Direction: Forward Position #: 16 Overlap #: 20 Alignment: AWYWGACRGBAGRCVGDGCKACCCWRTWMVAGCTW ---------------GGATTTMKGACTTGCATGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 287 Combined Motif Reverse Complement Reverse Complement YYCRTGCAASTSBGWAMKCCVGMCTBCKGTCWKWT CAMTTAGCATAATG YYCRTGCAASTSBGWMAHYYAGCMTVMTGTCWKWT Direction: Forward Position #: 16 Overlap #: 14 Alignment: YYCRTGCAASTSBGWAMKCCVGMCTBCKGTCWKWT ---------------CAMTTAGCATAATG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 293 Combined Motif Reverse Complement Original Motif AWYWGACAYBAYGCTMMDTRWCBSASTTGCAKGKK CTGACTGGGAGACACCTCCC AWYWGACAYBAYGCTCWGWCTSGGAGWYACMTSSC Direction: Forward Position #: 16 Overlap #: 20 Alignment: AWYWGACAYBAYGCTMMDTRWCBSASTTGCAKGKK ---------------CTGACTGGGAGACACCTCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 242 Combined Motif Reverse Complement Reverse Complement GSSAYGTKWCTCCSAGWCWGAGCMTVMTGTCWKWT CMCAGTTCACAATAGGGTT GSSAYGTKWCTCCSAVHCAGWKCAYAATRKSRTTT Direction: Forward Position #: 16 Overlap #: 19 Alignment: GSSAYGTKWCTCCSAGWCWGAGCMTVMTGTCWKWT ---------------CMCAGTTCACAATAGGGTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 284 Combined Motif Reverse Complement Reverse Complement AAAMSYKATTKTGRWCTGHVTSGGAGWYACMTSSC TCAATGGGCTCCCAAATG AAAMSYKATTKTGRWYYRADKGGSWSHCAMATGSC Direction: Forward Position #: 16 Overlap #: 18 Alignment: AAAMSYKATTKTGRWCTGHVTSGGAGWYACMTSSC ---------------TCAATGGGCTCCCAAATG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 78 Combined Motif Original Motif Reverse Complement AAAMSYKATTKTGRWYYRADKGGSWSHCAMATGSC CCGCGGGGCAGGGCTCG AAAMSYKATTKTGRWCCRMKGGGCAGGSMTMKGSC Direction: Forward Position #: 16 Overlap #: 17 Alignment: AAAMSYKATTKTGRWYYRADKGGSWSHCAMATGSC ---------------CCGCGGGGCAGGGCTCG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 356 Combined Motif Reverse Complement Reverse Complement GSCYRARSCCTGCCCYRMGGWKCAYAATRKSRTTT CAGTCTGTGTCTTTTAATT GSCYRARSCCTGCCCCABKSTKYRTMWTWTVATTT Direction: Forward Position #: 16 Overlap #: 19 Alignment: GSCYRARSCCTGCCCYRMGGWKCAYAATRKSRTTT ---------------CAGTCTGTGTCTTTTAATT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 292 Combined Motif Original Motif Original Motif GSCYRARSCCTGCCCCABKSTKYRTMWTWTVATTT AAGACCTTCCAGTGGGACAA GSCYRARSCCTGCCCMAGWCYTTCYADTGKGAYWW Direction: Forward Position #: 16 Overlap #: 20 Alignment: GSCYRARSCCTGCCCCABKSTKYRTMWTWTVATTT ---------------AAGACCTTCCAGTGGGACAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 52 Combined Motif Reverse Complement Original Motif WWKTCYCAHTKGAAKGWCTYGGGCAGGSMTMKGSC GACTGGCAGGCAGCTCCACC WWKTCYCAHTKGAAKGACTGGSRSRSAGCTCCRCC Direction: Forward Position #: 16 Overlap #: 20 Alignment: WWKTCYCAHTKGAAKGWCTYGGGCAGGSMTMKGSC ---------------GACTGGCAGGCAGCTCCACC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 140 Combined Motif Original Motif Reverse Complement WWKTCYCAHTKGAAKGACTGGSRSRSAGCTCCRCC GACTTCATGGAG WWKTCYCAHTKGAAKGACTKSVTGGMGGCTCCRCC Direction: Forward Position #: 16 Overlap #: 12 Alignment: WWKTCYCAHTKGAAKGACTGGSRSRSAGCTCCRCC ---------------GACTTCATGGAG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 205 Combined Motif Reverse Complement Reverse Complement GGKGGAGCCYCCABSRAGTCYTTCYADTGKGAYWW TGGGCTGCCAGATG GGKGGAGCCYCCABSHRGKCTKYCMRATGKGAYWW Direction: Forward Position #: 16 Overlap #: 14 Alignment: GGKGGAGCCYCCABSRAGTCYTTCYADTGKGAYWW ---------------TGGGCTGCCAGATG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 230 Combined Motif Reverse Complement Reverse Complement WWKTCYCATMYGKYAGYCKHSVTGGMGGCTCCRCC TTTTCACATGCCTTTCT WWKTCYCATMYGKYAKTYTCVCAKGCSKYTCTRCC Direction: Forward Position #: 16 Overlap #: 17 Alignment: WWKTCYCATMYGKYAGYCKHSVTGGMGGCTCCRCC ---------------TTTTCACATGCCTTTCT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 105 Combined Motif Original Motif Original Motif WWKTCYCATMYGKYAKTYTCVCAKGCSKYTCTRCC GCCTCTCCCTCCACACCTCC WWKTCYCATMYGKYAGYCTCTCMYKCCWCWCYTCC Direction: Forward Position #: 16 Overlap #: 20 Alignment: WWKTCYCATMYGKYAKTYTCVCAKGCSKYTCTRCC ---------------GCCTCTCCCTCCACACCTCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 232 Combined Motif Reverse Complement Reverse Complement GGAKGWGWGGRKRGAGAGKCTKYCMRATGKGAYWW AAGTCTCCCAATTACAACT GGAKGWGWGGRKRGARAGTCTSCCAATTRSAACTW Direction: Forward Position #: 16 Overlap #: 19 Alignment: GGAKGWGWGGRKRGAGAGKCTKYCMRATGKGAYWW ---------------AAGTCTCCCAATTACAACT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 271 Combined Motif Original Motif Original Motif GGAKGWGWGGRKRGARAGTCTSCCAATTRSAACTW AGGGATCTAGGTTGCR GGAKGWGWGGRKRGAARGKMTCYMRRTTGCRACTW Direction: Forward Position #: 16 Overlap #: 16 Alignment: GGAKGWGWGGRKRGARAGTCTSCCAATTRSAACTW ---------------AGGGATCTAGGTTGCR---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 168 Combined Motif Original Motif Original Motif GGAKGWGWGGRKRGAARGKMTCYMRRTTGCRACTW AGGTATTTCTCCCACC GGAKGWGWGGRKRGAAGGTATYTCTSYYRCVACTW Direction: Forward Position #: 16 Overlap #: 16 Alignment: GGAKGWGWGGRKRGAARGKMTCYMRRTTGCRACTW ---------------AGGTATTTCTCCCACC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 59 Combined Motif Reverse Complement Reverse Complement WAGTVGKMKSAGAMATACCTTCMYKCCWCWCYTCC CKCGTCSGGGAGG WAGTVGKMKSAGAMAYDCSTCCGGGMSGCWCYTCC Direction: Forward Position #: 16 Overlap #: 13 Alignment: WAGTVGKMKSAGAMATACCTTCMYKCCWCWCYTCC ---------------CKCGTCSGGGAGG------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 261 Combined Motif Reverse Complement Reverse Complement GGAKGWGCSYCCCGGASGHKTYTCTSYYRCVACTW TAGTGGTGATTTSTGAGAT GGAKGWGCSYCCCGGWAGTGKTKMTYTBWSARMTW Direction: Forward Position #: 16 Overlap #: 19 Alignment: GGAKGWGCSYCCCGGASGHKTYTCTSYYRCVACTW ---------------TAGTGGTGATTTSTGAGAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 69 Combined Motif Original Motif Reverse Complement GGAKGWGCSYCCCGGWAGTGKTKMTYTBWSARMTW TGTAKTCCCAGCTAC GGAKGWGCSYCCCGGTRKWKTYBMWKYTACARMTW Direction: Forward Position #: 16 Overlap #: 15 Alignment: GGAKGWGCSYCCCGGWAGTGKTKMTYTBWSARMTW ---------------TGTAKTCCCAGCTAC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 20 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 20 Motif 193 Reverse Complement Reverse Complement GGTCCATTGT GKCTGTACCCCCATTGTAT ATSSYCCATTGTGKCTGTA Direction: Backward Position #: 3 Overlap #: 10 Alignment: -------GGTCCATTGT-- GKCTGTACCCCCATTGTAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 322 Combined Motif Original Motif Original Motif ATSSYCCATTGTGKCTGTA AGGGCCTTTGCASWTGC ATSSYCCAKKGYSTYTGYASWTGC Direction: Forward Position #: 8 Overlap #: 12 Alignment: ATSSYCCATTGTGKCTGTA----- -------AGGGCCTTTGCASWTGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 284 Combined Motif Reverse Complement Reverse Complement GCAWSTMCAMASMCRRTGGKSSAT TCAATGGGCTCCCAAATG GCAWSTMCAMWCAMDGKGSTSCMWAATG Direction: Forward Position #: 11 Overlap #: 14 Alignment: GCAWSTMCAMASMCRRTGGKSSAT---- ----------TCAATGGGCTCCCAAATG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 36 Combined Motif Reverse Complement Reverse Complement CATTWRGSASCRCDYTGWYTGYASWTGC CGCCCATCGTCTGGGATGT CATTWRGSASCRCGCYSATYGTMYGKGMTGT Direction: Forward Position #: 13 Overlap #: 16 Alignment: CATTWRGSASCRCDYTGWYTGYASWTGC--- ------------CGCCCATCGTCTGGGATGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 147 Combined Motif Reverse Complement Reverse Complement ACAYCYCMRACMATSKGCGKGSTSCMWAATG TCAATGGTGCCCAG ACAYCYCMRACMATCRRTGGKGYCCAGAATG Direction: Forward Position #: 14 Overlap #: 14 Alignment: ACAYCYCMRACMATSKGCGKGSTSCMWAATG -------------TCAATGGTGCCCAG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 171 Combined Motif Original Motif Reverse Complement ACAYCYCMRACMATCRRTGGKGYCCAGAATG ACTTTGGACTGTGGACTTTT ACAYCYCMRACMAWCTTTGGDSTSYRGAMTKTT Direction: Forward Position #: 14 Overlap #: 18 Alignment: ACAYCYCMRACMATCRRTGGKGYCCAGAATG-- -------------ACTTTGGACTGTGGACTTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 182 Combined Motif Reverse Complement Original Motif AARARTCMMSASDCCAAAGWTYGTMYGKGMTGT GACCAMGAACCCA AARARTCMMSASDCSAMMRWKARYCCAKGMTGT Direction: Forward Position #: 15 Overlap #: 13 Alignment: AARARTCMMSASDCCAAAGWTYGTMYGKGMTGT --------------GACCAMGAACCCA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 144 Combined Motif Original Motif Original Motif AARARTCMMSASDCSAMMRWKARYCCAKGMTGT CCGCTGCACTGTGGGAGCCC AARARTCMMSASDCCMGCWDCAVTSYGGGAKSYC Direction: Forward Position #: 15 Overlap #: 19 Alignment: AARARTCMMSASDCSAMMRWKARYCCAKGMTGT- --------------CCGCTGCACTGTGGGAGCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 176 Combined Motif Original Motif Reverse Complement AARARTCMMSASDCCMGCWDCAVTSYGGGAKSYC AACAACASACACTGGGGCCT AARARTCMMSASDCCAACADCACWCWSKGRGGYCT Direction: Forward Position #: 16 Overlap #: 19 Alignment: AARARTCMMSASDCCMGCWDCAVTSYGGGAKSYC- ---------------AACAACASACACTGGGGCCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 17 Combined Motif Reverse Complement Reverse Complement AGKCCMCRSWGWGTGDTGTTGGDSTSYRGAMTKTT TGHCCTGCKCCCACTGTCT AGKCCMCRSWGWGTGTKDYYKGHBYCCASWVTYTT Direction: Forward Position #: 16 Overlap #: 19 Alignment: AGKCCMCRSWGWGTGDTGTTGGDSTSYRGAMTKTT ---------------TGHCCTGCKCCCACTGTCT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 53 Combined Motif Original Motif Original Motif AGKCCMCRSWGWGTGTKDYYKGHBYCCASWVTYTT GTCCCATCGACCACCCAAG AGKCCMCRSWGWGTGKTCCCDKCGMCCACYCWHKT Direction: Forward Position #: 16 Overlap #: 19 Alignment: AGKCCMCRSWGWGTGTKDYYKGHBYCCASWVTYTT ---------------GTCCCATCGACCACCCAAG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 350 Combined Motif Original Motif Reverse Complement AGKCCMCRSWGWGTGKTCCCDKCGMCCACYCWHKT TGCTGGAGGTCCACTCCAGA AGKCCMCRSWGWGTGTKCYSGWSGTCCACTCHAGW Direction: Forward Position #: 16 Overlap #: 20 Alignment: AGKCCMCRSWGWGTGKTCCCDKCGMCCACYCWHKT ---------------TGCTGGAGGTCCACTCCAGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 231 Combined Motif Original Motif Reverse Complement AGKCCMCRSWGWGTGTKCYSGWSGTCCACTCHAGW MGAAGGGACTTGCCTTGT AGKCCMCRSWGWGTGHGMWGGGASTYSMCTYBWGW Direction: Forward Position #: 16 Overlap #: 18 Alignment: AGKCCMCRSWGWGTGTKCYSGWSGTCCACTCHAGW ---------------MGAAGGGACTTGCCTTGT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 141 Combined Motif Reverse Complement Reverse Complement WCWBMAGRSMASTCCCWYCHCACWCWSKGRGGYCT CTACATGGACCTT WCWBMAGRSMASTCCCTWCAYRGACCBKGRGGYCT Direction: Forward Position #: 16 Overlap #: 13 Alignment: WCWBMAGRSMASTCCCWYCHCACWCWSKGRGGYCT ---------------CTACATGGACCTT------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 220 Combined Motif Reverse Complement Original Motif AGKCCMCRVGGTCMMTGWAGGGASTYSMCTYBWGW TGCACTGCACCCAC AGKCCMCRVGGTCMMTGCASKGCMYCCACTYBWGW Direction: Forward Position #: 16 Overlap #: 14 Alignment: AGKCCMCRVGGTCMMTGWAGGGASTYSMCTYBWGW ---------------TGCACTGCACCCAC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 261 Combined Motif Original Motif Original Motif AGKCCMCRVGGTCMMTGCASKGCMYCCACTYBWGW ATCTCASAAATCACCACTA AGKCCMCRVGGTCMMWKCWCWSAAWYCACYHCTRW Direction: Forward Position #: 16 Overlap #: 19 Alignment: AGKCCMCRVGGTCMMTGCASKGCMYCCACTYBWGW ---------------ATCTCASAAATCACCACTA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 196 Combined Motif Reverse Complement Original Motif WKAGHKGTGMWTTSWGWGRWYRGACCBKGRGGYCT CCTGCCATTGCYSAGGCTTG WKAGHKGTGMWTTSWSMKGYCAKWSCYBRGGSTYK Direction: Forward Position #: 16 Overlap #: 20 Alignment: WKAGHKGTGMWTTSWGWGRWYRGACCBKGRGGYCT ---------------CCTGCCATTGCYSAGGCTTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 211 Combined Motif Original Motif Original Motif WKAGHKGTGMWTTSWSMKGYCAKWSCYBRGGSTYK GACTTCAAGAATGAAGCCG WKAGHKGTGMWTTSWGACKTCADKRMTGARGCYBK Direction: Forward Position #: 16 Overlap #: 19 Alignment: WKAGHKGTGMWTTSWSMKGYCAKWSCYBRGGSTYK ---------------GACTTCAAGAATGAAGCCG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 61 Combined Motif Original Motif Original Motif WKAGHKGTGMWTTSWGACKTCADKRMTGARGCYBK GGATCCACTGGGTGAAGCCA WKAGHKGTGMWTTSWGRMTYCACTRGKKRARSCCA Direction: Forward Position #: 16 Overlap #: 20 Alignment: WKAGHKGTGMWTTSWGACKTCADKRMTGARGCYBK ---------------GGATCCACTGGGTGAAGCCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 99 Combined Motif Reverse Complement Original Motif TGGSKTMRYCMAGTGKAYMCWSAAWYCACYHCTRW GCAAAKGACATGATYTCATT TGGSKTMRYCMAGTGGMAAMDGAMATSAYYTCWTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: TGGSKTMRYCMAGTGKAYMCWSAAWYCACYHCTRW ---------------GCAAAKGACATGATYTCATT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 45 Combined Motif Original Motif Original Motif TGGSKTMRYCMAGTGGMAAMDGAMATSAYYTCWTT TGCCCAGTCTGGAAAGTG TGGSKTMRYCMAGTGKGCCCAGWCWKGAAMKYGTT Direction: Forward Position #: 16 Overlap #: 18 Alignment: TGGSKTMRYCMAGTGGMAAMDGAMATSAYYTCWTT ---------------TGCCCAGTCTGGAAAGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 206 Combined Motif Reverse Complement Reverse Complement AACMYYTTCYWGWCTGGGCRCACTRGKKRARSCCA GGRCKCACWGGAGC AACMYYTTCYWGWCTGGRCDCACWGGRGSARSCCA Direction: Forward Position #: 16 Overlap #: 14 Alignment: AACMYYTTCYWGWCTGGGCRCACTRGKKRARSCCA ---------------GGRCKCACWGGAGC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 3 Combined Motif Reverse Complement Reverse Complement TGGSKTSCKCCWGTGHGMCCAGWCWKGAAMKYGTT TCKMGCCACTGCACTCCAGC TGGSKTSCKCCWGTGTSBCBMSACTGSAMTSCAKY Direction: Forward Position #: 16 Overlap #: 20 Alignment: TGGSKTSCKCCWGTGHGMCCAGWCWKGAAMKYGTT ---------------TCKMGCCACTGCACTCCAGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 38 Combined Motif Original Motif Reverse Complement TGGSKTSCKCCWGTGTSBCBMSACTGSAMTSCAKY TCTMKGCTCACTGC TGGSKTSCKCCWGTGTCTCGGCWCWSYRCTSCAKY Direction: Forward Position #: 16 Overlap #: 14 Alignment: TGGSKTSCKCCWGTGTSBCBMSACTGSAMTSCAKY ---------------TCTMKGCTCACTGC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 166 Combined Motif Original Motif Original Motif TGGSKTSCKCCWGTGTCTCGGCWCWSYRCTSCAKY AAGGGACATTKGAG TGGSKTSCKCCWGTGWMKSGACWYTBKASTSCAKY Direction: Forward Position #: 16 Overlap #: 14 Alignment: TGGSKTSCKCCWGTGTCTCGGCWCWSYRCTSCAKY ---------------AAGGGACATTKGAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 292 Combined Motif Original Motif Reverse Complement TGGSKTSCKCCWGTGWMKSGACWYTBKASTSCAKY TTGTCCCACTGGAAGGTCTT TGGSKTSCTYSTSYSACTGGAMRBTCTWSTSCAKY Direction: Forward Position #: 9 Overlap #: 20 Alignment: TGGSKTSCKCCWGTGWMKSGACWYTBKASTSCAKY --------TTGTCCCACTGGAAGGTCTT------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 64 Combined Motif Original Motif Original Motif TGGSKTSCTYSTSYSACTGGAMRBTCTWSTSCAKY GAAGGCAGCTAAGGCCCGGY TGGSKTSCTYSTSYSRMWGGMAGCTMWGGYCCRGY Direction: Forward Position #: 16 Overlap #: 20 Alignment: TGGSKTSCTYSTSYSACTGGAMRBTCTWSTSCAKY ---------------GAAGGCAGCTAAGGCCCGGY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 242 Combined Motif Reverse Complement Reverse Complement KCMGGKCCWYAGCTRCCWYMSKSASMAGSARSCCA CMCAGTTCACAATAGGGTT KCMGGKCCWYAGCTRCCHWVBTCACAAKARGGYYA Direction: Forward Position #: 16 Overlap #: 19 Alignment: KCMGGKCCWYAGCTRCCWYMSKSASMAGSARSCCA ---------------CMCAGTTCACAATAGGGTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 62 Combined Motif Reverse Complement Original Motif TMMCCMTRTTGTGAVVWDGGMAGCTMWGGYCCRGY AGGAACAGCTCCRGTCTAC TMMCCMTRTTGTGAVAGGRRCAGCTCHRGTCYASY Direction: Forward Position #: 16 Overlap #: 19 Alignment: TMMCCMTRTTGTGAVVWDGGMAGCTMWGGYCCRGY ---------------AGGAACAGCTCCRGTCTAC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 333 Combined Motif Reverse Complement Original Motif KSTMGACMDGAGCTGKKCCTBTCACAAKARGGYYA TAGATAATAGCTCCAGCTTT KSTMGACMDGAGCTGTWSMTAWYASMWYCAGSYTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: KSTMGACMDGAGCTGKKCCTBTCACAAKARGGYYA ---------------TAGATAATAGCTCCAGCTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 363 Combined Motif Reverse Complement Reverse Complement AAMSCTGKWRSTMWTAYSWACAGCTCHRGTCYASY WACAATCAGACCTTG AAMSCTGKWRSTMWTAHCAAYMRSWCCTKKCYASY Direction: Forward Position #: 16 Overlap #: 15 Alignment: AAMSCTGKWRSTMWTAYSWACAGCTCHRGTCYASY ---------------WACAATCAGACCTTG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 167 Combined Motif Original Motif Original Motif AAMSCTGKWRSTMWTAHCAAYMRSWCCTKKCYASY CCGCTCCTGTGC AAMSCTGKWRSTMWTMCSMWCCWGTSCTKKCYASY Direction: Forward Position #: 16 Overlap #: 12 Alignment: AAMSCTGKWRSTMWTAHCAAYMRSWCCTKKCYASY ---------------CCGCTCCTGTGC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 97 Combined Motif Reverse Complement Reverse Complement KSTMGYRAGSACWGGWRSGRAWYASMWYCAGSYTT ATTCGGCCATCTT KSTMGYRAGSACWGGATYVGGMCAKCTTCAGSYTT Direction: Forward Position #: 16 Overlap #: 13 Alignment: KSTMGYRAGSACWGGWRSGRAWYASMWYCAGSYTT ---------------ATTCGGCCATCTT------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 13 Combined Motif Original Motif Reverse Complement KSTMGYRAGSACWGGATYVGGMCAKCTTCAGSYTT GGCAATGCCTCGCCCTGCTT KSTMGYRAGSACWGGRGCMRKGCMTCKYCMKGCTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: KSTMGYRAGSACWGGATYVGGMCAKCTTCAGSYTT ---------------GGCAATGCCTCGCCCTGCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 305 Combined Motif Reverse Complement Reverse Complement AAGCRRGKRGARGCRKYGCMCCWGTSCTKKCYASY GCTCTCAATTGGTCATT AAGCRRGKRGARGCRGCTCTCMAKTGSTCDYTASY Direction: Forward Position #: 16 Overlap #: 17 Alignment: AAGCRRGKRGARGCRKYGCMCCWGTSCTKKCYASY ---------------GCTCTCAATTGGTCATT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 308 Combined Motif Original Motif Reverse Complement AAGCRRGKRGARGCRGCTCTCMAKTGSTCDYTASY GTTATTAATTGGCCTAATTT AAGCRRGKRGARGCRGYTMTYAAKTGGYCTHWWTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAGCRRGKRGARGCRGCTCTCMAKTGSTCDYTASY ---------------GTTATTAATTGGCCTAATTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 9 Combined Motif Original Motif Reverse Complement AAGCRRGKRGARGCRGYTMTYAAKTGGYCTHWWTT GCTCCATGTG AAGCRRGKRGARGCRGCTCYWWRTKGGYCTHWWTT Direction: Forward Position #: 16 Overlap #: 10 Alignment: AAGCRRGKRGARGCRGYTMTYAAKTGGYCTHWWTT ---------------GCTCCATGTG---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 327 Combined Motif Reverse Complement Reverse Complement AAWWHAGKCCYAMWWKGAGCKGCMTCKYCMKGCTT GAAATTGACTTCCTCCT AAWWHAGKCCYAMWWGRARYTGMCTYCCYCYKCTT Direction: Forward Position #: 16 Overlap #: 17 Alignment: AAWWHAGKCCYAMWWKGAGCKGCMTCKYCMKGCTT ---------------GAAATTGACTTCCTCCT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 202 Combined Motif Original Motif Reverse Complement AAWWHAGKCCYAMWWGRARYTGMCTYCCYCYKCTT GAAACTGCTTTGTGATGTGT AAWWHAGKCCYAMWWGAAAYTGCYTTGYBMTGYKT Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAWWHAGKCCYAMWWGRARYTGMCTYCCYCYKCTT ---------------GAAACTGCTTTGTGATGTGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 214 Combined Motif Original Motif Reverse Complement AAWWHAGKCCYAMWWGAAAYTGCYTTGYBMTGYKT GGTTTTCCATTCCTGAG AAWWHAGKCCYAMWWGRWWTTSCATTCCTRWGYKT Direction: Forward Position #: 16 Overlap #: 17 Alignment: AAWWHAGKCCYAMWWGAAAYTGCYTTGYBMTGYKT ---------------GGTTTTCCATTCCTGAG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 145 Combined Motif Reverse Complement Reverse Complement AYMCWMAGGAATGSAAWWMCWWRTKGGYCTHWWTT TYTGTCMTTTTGTGACTGGC AYMCWMAGGAATGSAWWTVYMHKTKKGTSWCTGKY Direction: Forward Position #: 16 Overlap #: 20 Alignment: AYMCWMAGGAATGSAAWWMCWWRTKGGYCTHWWTT ---------------TYTGTCMTTTTGTGACTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 215 Combined Motif Original Motif Original Motif AYMCWMAGGAATGSAWWTVYMHKTKKGTSWCTGKY HGCTCCTGTGSKCCC AYMCWMAGGAATGSAHGYTCCWGTGBKYCHCTGKY Direction: Forward Position #: 16 Overlap #: 15 Alignment: AYMCWMAGGAATGSAWWTVYMHKTKKGTSWCTGKY ---------------HGCTCCTGTGSKCCC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 119 Combined Motif Original Motif Original Motif AYMCWMAGGAATGSAHGYTCCWGTGBKYCHCTGKY AAGTCCAAGATCAAGGTGYY AYMCWMAGGAATGSAARBTCCARKRYSHMVVTGBY Direction: Forward Position #: 16 Overlap #: 20 Alignment: AYMCWMAGGAATGSAHGYTCCWGTGBKYCHCTGKY ---------------AAGTCCAAGATCAAGGTGYY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 332 Combined Motif Reverse Complement Reverse Complement KVCAVVYHSMKYKTGGABKTTSCATTCCTRWGYKT GTTTAACCATTGAGGGCCAG KVCAVVYHSMKYKTGGWTTWWCCATTGMKGGSCAK Direction: Forward Position #: 16 Overlap #: 20 Alignment: KVCAVVYHSMKYKTGGABKTTSCATTCCTRWGYKT ---------------GTTTAACCATTGAGGGCCAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 85 Combined Motif Original Motif Reverse Complement KVCAVVYHSMKYKTGGWTTWWCCATTGMKGGSCAK TGGAGAACCTTTATGTCTAG KVCAVVYHSMKYKTGKKKWRAMCMTTKATGTCYAG Direction: Forward Position #: 16 Overlap #: 20 Alignment: KVCAVVYHSMKYKTGGWTTWWCCATTGMKGGSCAK ---------------TGGAGAACCTTTATGTCTAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 353 Combined Motif Reverse Complement Reverse Complement CTMGACATRAARGRTMWYYRCARKRYSHMVVTGBY GCTTCCATGTG CTMGACATRAARGRTSHTTMCAWGTGSHMVVTGBY Direction: Forward Position #: 16 Overlap #: 11 Alignment: CTMGACATRAARGRTMWYYRCARKRYSHMVVTGBY ---------------GCTTCCATGTG--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 256 Combined Motif Reverse Complement Original Motif KVCAVVYHSCACWTGRAADSAMCMTTKATGTCYAG RCAGTGTACACTGY KVCAVVYHSCACWTGRCAGTRTMCWYTRYGTCYAG Direction: Forward Position #: 16 Overlap #: 14 Alignment: KVCAVVYHSCACWTGRAADSAMCMTTKATGTCYAG ---------------RCAGTGTACACTGY------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 23 Combined Motif Reverse Complement Reverse Complement CTMGACMMAMWGYAKACTGMCAWGTGSHMVVTGBY ACTCCCTAGTGAGATGAACC CTMGACMMAMWGYAKACTSCCWAGTGMGATGWRCC Direction: Forward Position #: 16 Overlap #: 20 Alignment: CTMGACMMAMWGYAKACTGMCAWGTGSHMVVTGBY ---------------ACTCCCTAGTGAGATGAACC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 11 Combined Motif Original Motif Reverse Complement CTMGACMMAMWGYAKACTSCCWAGTGMGATGWRCC TGGACCTTGAG CTMGACMMAMWGYAKWSKACCTWGWGMGATGWRCC Direction: Forward Position #: 16 Overlap #: 11 Alignment: CTMGACMMAMWGYAKACTSCCWAGTGMGATGWRCC ---------------TGGACCTTGAG--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 107 Combined Motif Original Motif Original Motif CTMGACMMAMWGYAKWSKACCTWGWGMGATGWRCC GAGCCACYGCRCC CTMGACMMAMWGYAKGAGCCMYTGHGCCATGWRCC Direction: Forward Position #: 16 Overlap #: 13 Alignment: CTMGACMMAMWGYAKWSKACCTWGWGMGATGWRCC ---------------GAGCCACYGCRCC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 296 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 296 Motif 120 Original Motif Original Motif CCACGTGG CCATGTGSTCCC TCCCCCAYGTGG Direction: Backward Position #: 5 Overlap #: 8 Alignment: CCACGTGG---- CCATGTGSTCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 61 Reverse Complement Reverse Complement CCACKTGGGGGA TGGCTTCACCCAGTGGATCC TGGCTYCACSYRGKGGATCC Direction: Forward Position #: 6 Overlap #: 12 Alignment: -----CCACKTGGGGGA--- TGGCTTCACCCAGTGGATCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 98 Combined Motif Original Motif Reverse Complement TGGCTYCACSYRGKGGATCC CCCACGCCCACCCGGAACT TGGCTYCACCCASKSSMWCCCGGAACT Direction: Forward Position #: 9 Overlap #: 12 Alignment: TGGCTYCACSYRGKGGATCC------- --------CCCACGCCCACCCGGAACT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 104 Combined Motif Original Motif Original Motif TGGCTYCACCCASKSSMWCCCGGAACT CAACATGGATGRARCTGGAG TGGCTYCACCCVRRCVHDSMYGGAACTGGAG Direction: Forward Position #: 12 Overlap #: 16 Alignment: TGGCTYCACCCASKSSMWCCCGGAACT---- -----------CAACATGGATGRARCTGGAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 163 Combined Motif Reverse Complement Original Motif CTCCAGTTCCMYSHHVGKMBGGGTGMAGCCA CCTCCGTGGGCTCC CTCCAGTTCCMYSCCTSCGTGGGYKCMGCCA Direction: Forward Position #: 14 Overlap #: 14 Alignment: CTCCAGTTCCMYSHHVGKMBGGGTGMAGCCA -------------CCTCCGTGGGCTCC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 257 Combined Motif Original Motif Reverse Complement CTCCAGTTCCMYSCCTSCGTGGGYKCMGCCA TGTCCATGTGTTCTC CTCCAGTTCCMYSYSTCCATGKGTTCHSCCA Direction: Forward Position #: 14 Overlap #: 15 Alignment: CTCCAGTTCCMYSCCTSCGTGGGYKCMGCCA -------------TGTCCATGTGTTCTC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 78 Combined Motif Reverse Complement Original Motif TGGSHGAACRCATGGASMSMYGGAACTGGAG CGAGCCCTGCCCCGCGG TGGSHGAACRCATSGAGCCCTGSMMCKSGRG Direction: Forward Position #: 14 Overlap #: 17 Alignment: TGGSHGAACRCATGGASMSMYGGAACTGGAG -------------CGAGCCCTGCCCCGCGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 141 Combined Motif Original Motif Original Motif TGGSHGAACRCATSGAGCCCTGSMMCKSGRG AAGGTCCATGTAG TGGSHGAACRCATVRRGYCCWKGHASKSGRG Direction: Forward Position #: 14 Overlap #: 13 Alignment: TGGSHGAACRCATSGAGCCCTGSMMCKSGRG -------------AAGGTCCATGTAG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 93 Combined Motif Original Motif Reverse Complement TGGSHGAACRCATVRRGYCCWKGHASKSGRG CCGCACATGG TGGSHGAACRCATVCGSACMTGGHASKSGRG Direction: Forward Position #: 14 Overlap #: 10 Alignment: TGGSHGAACRCATVRRGYCCWKGHASKSGRG -------------CCGCACATGG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 235 Combined Motif Reverse Complement Original Motif CMCSRSTHCCAYGTSCGVATGKGTTCHSCCA TCCAAATGGGAGAAATTGGC CMCSRSTHCCAYGTCCAAATGGGWKMARYYRGC Direction: Forward Position #: 14 Overlap #: 18 Alignment: CMCSRSTHCCAYGTSCGVATGKGTTCHSCCA-- -------------TCCAAATGGGAGAAATTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 33 Combined Motif Original Motif Reverse Complement CMCSRSTHCCAYGTCCAAATGGGWKMARYYRGC GAGACTCCGTGGGCGT CMCSRSTHCCAYGTSMGAMTSBGTGRRMBTRGC Direction: Forward Position #: 15 Overlap #: 16 Alignment: CMCSRSTHCCAYGTCCAAATGGGWKMARYYRGC --------------GAGACTCCGTGGGCGT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 15 Combined Motif Reverse Complement Original Motif GCKABRMMCACBSAYTCYSACMTGGHASKSGRG CTTGCGCTTCCCRRGTGA GCKABRMMCACBSACTYKCRCTTSSYRRGTGAG Direction: Forward Position #: 15 Overlap #: 18 Alignment: GCKABRMMCACBSAYTCYSACMTGGHASKSGRG --------------CTTGCGCTTCCCRRGTGA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 60 Combined Motif Original Motif Original Motif GCKABRMMCACBSACTYKCRCTTSSYRRGTGAG GATCACGAGGTCAGGAG GCKABRMMCACBSASWTCMVSAKGYCAGGWGAG Direction: Forward Position #: 15 Overlap #: 17 Alignment: GCKABRMMCACBSACTYKCRCTTSSYRRGTGAG --------------GATCACGAGGTCAGGAG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 74 Combined Motif Reverse Complement Reverse Complement CTCWCCTGMCYTSVYGAWSTSBGTGRRMBTRGC CCATCTAGGAAGTG CTCWCCTGMCYTSVCSATCTVGGWRGKGBTRGC Direction: Forward Position #: 15 Overlap #: 14 Alignment: CTCWCCTGMCYTSVYGAWSTSBGTGRRMBTRGC --------------CCATCTAGGAAGTG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 149 Combined Motif Original Motif Reverse Complement CTCWCCTGMCYTSVCSATCTVGGWRGKGBTRGC GGGTGCAGGMGGGCTGAGT CTCWCCTGMCYTSVSGRTSYAGGMGGGCTKAGY Direction: Forward Position #: 15 Overlap #: 19 Alignment: CTCWCCTGMCYTSVCSATCTVGGWRGKGBTRGC --------------GGGTGCAGGMGGGCTGAGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 140 Combined Motif Reverse Complement Original Motif MCTYAGCCCYCCTKSAMCSVSAKGYCAGGWGAG CTCCATGAAGTC MCTYAGCCCYCCTKCWCCMBGAAGTCAGGWGAG Direction: Forward Position #: 15 Overlap #: 12 Alignment: MCTYAGCCCYCCTKSAMCSVSAKGYCAGGWGAG --------------CTCCATGAAGTC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 82 Combined Motif Reverse Complement Reverse Complement CTCWCCTGACTTCVYGGWGYAGGMGGGCTKAGY GCTGGCCCKGGTGCTAAGC CTCWCCTGACTTCVKSKRGCMSGVGKGCTDAGC Direction: Forward Position #: 15 Overlap #: 19 Alignment: CTCWCCTGACTTCVYGGWGYAGGMGGGCTKAGY --------------GCTGGCCCKGGTGCTAAGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 56 Combined Motif Original Motif Reverse Complement CTCWCCTGACTTCVKSKRGCMSGVGKGCTDAGC GCCKGGMKCMGTGGCTCAKG CTCWCCTGACTTCVGCHKGSMSSVGTGSYTMRBG Direction: Forward Position #: 15 Overlap #: 19 Alignment: CTCWCCTGACTTCVKSKRGCMSGVGKGCTDAGC- --------------GCCKGGMKCMGTGGCTCAKG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 201 Combined Motif Original Motif Reverse Complement CTCWCCTGACTTCVGCHKGSMSSVGTGSYTMRBG ACCKTCGCGGTGAGTGTTAC CTCWCCTGACTTCVGMCBKTCGCDGTGRGTGDTRC Direction: Forward Position #: 16 Overlap #: 19 Alignment: CTCWCCTGACTTCVGCHKGSMSSVGTGSYTMRBG- ---------------ACCKTCGCGGTGAGTGTTAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 155 Combined Motif Original Motif Original Motif CTCWCCTGACTTCVGMCBKTCGCDGTGRGTGDTRC TCCCTCCCGGACGGGGYGGC CTCWCCTGACTTCVGWCCSTCSCGGWSRGKGYKGC Direction: Forward Position #: 16 Overlap #: 20 Alignment: CTCWCCTGACTTCVGMCBKTCGCDGTGRGTGDTRC ---------------TCCCTCCCGGACGGGGYGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 19 Combined Motif Reverse Complement Reverse Complement GCYMCYCMSWCCGSGASGGWCBGAAGTCAGGWGAG MGGGATATAATCTCCTGGTG GCYMCYCMSWCCGSGMGGGAYAKAAKYYMSKGGWG Direction: Forward Position #: 16 Overlap #: 20 Alignment: GCYMCYCMSWCCGSGASGGWCBGAAGTCAGGWGAG ---------------MGGGATATAATCTCCTGGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 144 Combined Motif Reverse Complement Original Motif CWCCRSRMKRTTRTMTCCCYCSCGGWSRGKGYKGC CCGCTGCACTGTGGGAGCCC CWCCRSRMKRTTRTMYCSCTSCMSKGTGGGRGSSC Direction: Forward Position #: 16 Overlap #: 20 Alignment: CWCCRSRMKRTTRTMTCCCYCSCGGWSRGKGYKGC ---------------CCGCTGCACTGTGGGAGCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 90 Combined Motif Original Motif Original Motif CWCCRSRMKRTTRTMYCSCTSCMSKGTGGGRGSSC CCCCATTGCY CWCCRSRMKRTTRTMCCCCWTYRCBGTGGGRGSSC Direction: Forward Position #: 16 Overlap #: 10 Alignment: CWCCRSRMKRTTRTMYCSCTSCMSKGTGGGRGSSC ---------------CCCCATTGCY---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 200 Combined Motif Original Motif Reverse Complement CWCCRSRMKRTTRTMCCCCWTYRCBGTGGGRGSSC TCCCAGACGGGGT CWCCRSRMKRTTRTMYCCCAGWCSGGGKGGRGSSC Direction: Forward Position #: 16 Overlap #: 13 Alignment: CWCCRSRMKRTTRTMCCCCWTYRCBGTGGGRGSSC ---------------TCCCAGACGGGGT------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 43 Combined Motif Original Motif Original Motif CWCCRSRMKRTTRTMYCCCAGWCSGGGKGGRGSSC GCCAGGCAGAGRGKCTCCT CWCCRSRMKRTTRTMKCCMRGCMGRGGKGSWCCYC Direction: Forward Position #: 16 Overlap #: 19 Alignment: CWCCRSRMKRTTRTMYCCCAGWCSGGGKGGRGSSC ---------------GCCAGGCAGAGRGKCTCCT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 176 Combined Motif Original Motif Original Motif CWCCRSRMKRTTRTMKCCMRGCMGRGGKGSWCCYC AGGCCCCAGTGTSTGTTGTT CWCCRSRMKRTTRTMDSSCVSCAGWGKGTGTYSTY Direction: Forward Position #: 16 Overlap #: 20 Alignment: CWCCRSRMKRTTRTMKCCMRGCMGRGGKGSWCCYC ---------------AGGCCCCAGTGTSTGTTGTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 118 Combined Motif Reverse Complement Reverse Complement MASMACACRCWCTGSVGSSDYAKAAKYYMSKGGWG GGAGGATCACKTGAG MASMACACRCWCTGSGGDGKWTBAMKTKAGKGGWG Direction: Forward Position #: 16 Overlap #: 15 Alignment: MASMACACRCWCTGSVGSSDYAKAAKYYMSKGGWG ---------------GGAGGATCACKTGAG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 193 Combined Motif Reverse Complement Original Motif CWCCRCTYARRTBAWYCHCCSCAGWGKGTGTYSTY ATACAATGGGGGTACAGRC CWCCRCTYARRTBAWMYACMMYRGKGKKWCAKRYY Direction: Forward Position #: 16 Overlap #: 19 Alignment: CWCCRCTYARRTBAWYCHCCSCAGWGKGTGTYSTY ---------------ATACAATGGGGGTACAGRC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 226 Combined Motif Original Motif Original Motif CWCCRCTYARRTBAWMYACMMYRGKGKKWCAKRYY AATAAACATGG CWCCRCTYARRTBAWAAWMAACAKGGKKWCAKRYY Direction: Forward Position #: 16 Overlap #: 11 Alignment: CWCCRCTYARRTBAWMYACMMYRGKGKKWCAKRYY ---------------AATAAACATGG--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 331 Combined Motif Reverse Complement Original Motif MMMYTGWRYCCYTGTTYWTTWTBAMKTKAGKGGWG CCACCACAGCTCAAGGAGGC MMMYTGWRYCCYTGTYCACYAYARCTYDAGGAGGS Direction: Forward Position #: 16 Overlap #: 20 Alignment: MMMYTGWRYCCYTGTTYWTTWTBAMKTKAGKGGWG ---------------CCACCACAGCTCAAGGAGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 12 Combined Motif Reverse Complement Reverse Complement SCCTCCTDKAGMTKTKGTGKACAKGGKKWCAKRYY GTTGGCCAGGCTGGTCT SCCTCCTDKAGMTKTGTTGGMCAGGSTGGYMTRYY Direction: Forward Position #: 16 Overlap #: 17 Alignment: SCCTCCTDKAGMTKTKGTGKACAKGGKKWCAKRYY ---------------GTTGGCCAGGCTGGTCT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 71 Combined Motif Reverse Complement Reverse Complement MMMARMCCASCCTGRCCAACAYARCTYDAGGAGGS CAAAGTGCT MMMARMCCASCCTGRCMAASWBCDCTYDAGGAGGS Direction: Forward Position #: 16 Overlap #: 9 Alignment: MMMARMCCASCCTGRCCAACAYARCTYDAGGAGGS ---------------CAAAGTGCT----------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 360 Combined Motif Original Motif Original Motif MMMARMCCASCCTGRCMAASWBCDCTYDAGGAGGS CAATGGGGTG MMMARMCCASCCTGRCAAWGKGSTSTYDAGGAGGS Direction: Forward Position #: 16 Overlap #: 10 Alignment: MMMARMCCASCCTGRCMAASWBCDCTYDAGGAGGS ---------------CAATGGGGTG---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 321 Combined Motif Reverse Complement Reverse Complement SCCTCCTDKASASCYCWTTGMCAGGSTGGYMTRYY GCTCCACCCAGTTCGAGCTT SCCTCCTDKASASCYSHTYSACMSRGTKVKAKCTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: SCCTCCTDKASASCYCWTTGMCAGGSTGGYMTRYY ---------------GCTCCACCCAGTTCGAGCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 269 Combined Motif Original Motif Reverse Complement SCCTCCTDKASASCYSHTYSACMSRGTKVKAKCTT GCACATGTCGCT SCSYMCWTGWCRCYYSHTYSACMSRGTKVKAKCTT Direction: Forward Position #: 3 Overlap #: 12 Alignment: SCCTCCTDKASASCYSHTYSACMSRGTKVKAKCTT --GCACATGTCGCT--------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 143 Combined Motif Original Motif Original Motif SCSYMCWTGWCRCYYSHTYSACMSRGTKVKAKCTT CTGCGTCGCTCAC SCSYMCWTGWCRCYYCTKCGWCVCTSWYVKAKCTT Direction: Forward Position #: 16 Overlap #: 13 Alignment: SCSYMCWTGWCRCYYSHTYSACMSRGTKVKAKCTT ---------------CTGCGTCGCTCAC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 114 Combined Motif Original Motif Original Motif SCSYMCWTGWCRCYYCTKCGWCVCTSWYVKAKCTT CTACGTTCTC SCSYMCWTGWCRCYYCTRCGTYCYYSWYVKAKCTT Direction: Forward Position #: 16 Overlap #: 10 Alignment: SCSYMCWTGWCRCYYCTKCGWCVCTSWYVKAKCTT ---------------CTACGTTCTC---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 271 Combined Motif Reverse Complement Reverse Complement AAGYTYVKWSKMGMACGKAGKMGMGWCAWGYKSGS KGCAACCTAGATCCCT AAGYTYVKWSKMGMABGBARCCKAGAYMCSTKSGS Direction: Forward Position #: 16 Overlap #: 16 Alignment: AAGYTYVKWSKMGMACGKAGKMGMGWCAWGYKSGS ---------------KGCAACCTAGATCCCT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 58 Combined Motif Reverse Complement Original Motif SCSYASGRMTCTRGGMTBCBTYCYYSWYVKAKCTT ATGGACAYTTRGGTTGHTTC SCSYASGRMTCTRGGATGSDYHCTTVRGBTRDYTY Direction: Forward Position #: 16 Overlap #: 20 Alignment: SCSYASGRMTCTRGGMTBCBTYCYYSWYVKAKCTT ---------------ATGGACAYTTRGGTTGHTTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 305 Combined Motif Original Motif Reverse Complement SCSYASGRMTCTRGGATGSDYHCTTVRGBTRDYTY GCTCTCAATTGGTCATT SCSYASGRMTCTRGGRYKCTCAMTTGGKCDTTYTY Direction: Forward Position #: 16 Overlap #: 17 Alignment: SCSYASGRMTCTRGGATGSDYHCTTVRGBTRDYTY ---------------GCTCTCAATTGGTCATT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 292 Combined Motif Original Motif Reverse Complement SCSYASGRMTCTRGGRYKCTCAMTTGGKCDTTYTY TTGTCCCACTGGAAGGTCTT SCSYASGRMTCTRGGKTKYYCMAYTGGWMGGTCTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: SCSYASGRMTCTRGGRYKCTCAMTTGGKCDTTYTY ---------------TTGTCCCACTGGAAGGTCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 107 Combined Motif Reverse Complement Reverse Complement AAGACCYWCCAKTRGKMYARCCKAGAYMCSTKSGS GGMGCKGTGGCTC AAGACCYWCCAKTRGGGCVMBSTRGMTCCSTKSGS Direction: Forward Position #: 16 Overlap #: 13 Alignment: AAGACCYWCCAKTRGKMYARCCKAGAYMCSTKSGS ---------------GGMGCKGTGGCTC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 225 Combined Motif Original Motif Reverse Complement AAGACCYWCCAKTRGGGCVMBSTRGMTCCSTKSGS AAGTTCTKGGKTACATGTGC AAGACCYWCCAKTRGRASTTCBKGGBTMCMTGKGC Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAGACCYWCCAKTRGGGCVMBSTRGMTCCSTKSGS ---------------AAGTTCTKGGKTACATGTGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 199 Combined Motif Reverse Complement Reverse Complement GCRCAYGYABCCRVGAASTKCMAYTGGWMGGTCTT GGTGCCAGCTGT GCRCAYGYABCCRVGGGTKBCARCTGKWMGGTCTT Direction: Forward Position #: 16 Overlap #: 12 Alignment: GCRCAYGYABCCRVGAASTKCMAYTGGWMGGTCTT ---------------GGTGCCAGCTGT-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 178 Combined Motif Original Motif Reverse Complement GCRCAYGYABCCRVGGGTKBCARCTGKWMGGTCTT ATGTGGAGGTGGAAGACAGT GCRCAYGYABCCRVGAKKTGSAGSTGGAAGRYMKT Direction: Forward Position #: 16 Overlap #: 20 Alignment: GCRCAYGYABCCRVGGGTKBCARCTGKWMGGTCTT ---------------ATGTGGAGGTGGAAGACAGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 230 Combined Motif Original Motif Original Motif GCRCAYGYABCCRVGAKKTGSAGSTGGAAGRYMKT AGAAAGGCATGTGAAAA GCRCAYGYABCCRVGAGRWRGRSATGTRARAAMKT Direction: Forward Position #: 16 Overlap #: 17 Alignment: GCRCAYGYABCCRVGAKKTGSAGSTGGAAGRYMKT ---------------AGAAAGGCATGTGAAAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 128 Combined Motif Reverse Complement Reverse Complement AYYTTKTMACATSMCKWKCTCBKGGBTMCMTGKGC CMGCTCCGAGTGCGG AYYTTKTMACATSMCCHGCTCCGRGTKMSGTGKGC Direction: Forward Position #: 16 Overlap #: 15 Alignment: AYYTTKTMACATSMCKWKCTCBKGGBTMCMTGKGC ---------------CMGCTCCGAGTGCGG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 132 Combined Motif Reverse Complement Reverse Complement GCRCACSRYACKCGGAGCHGGRSATGTRARAAMKT GCCGCCATCTTG GCRCACSRYACKCGGRSCGCSAYMTKKRARAAMKT Direction: Forward Position #: 16 Overlap #: 12 Alignment: GCRCACSRYACKCGGAGCHGGRSATGTRARAAMKT ---------------GCCGCCATCTTG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 165 Combined Motif Original Motif Reverse Complement GCRCACSRYACKCGGRSCGCSAYMTKKRARAAMKT AGCTCMKCCTCCTGTCAGAT GCRCACSRYACKCGGAGCKCCRCCTBSKRWMAVDT Direction: Forward Position #: 16 Overlap #: 20 Alignment: GCRCACSRYACKCGGRSCGCSAYMTKKRARAAMKT ---------------AGCTCMKCCTCCTGTCAGAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 25 Combined Motif Reverse Complement Original Motif ADVTRWMRSBAGGKGGRGCTCCGRGTKMSGTGKGC CATTTCCAWCTGAGGTAC ADVTRWMRSBAGGKGSAKYTCCRWSTGAGGTRCGC Direction: Forward Position #: 16 Overlap #: 18 Alignment: ADVTRWMRSBAGGKGGRGCTCCGRGTKMSGTGKGC ---------------CATTTCCAWCTGAGGTAC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 328 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 328 Motif 119 Original Motif Original Motif GATACAAAATCAATGTR AAGTCCAAGATCAAGGTGYY ARRTMCAARATCAABGTRYY Direction: Forward Position #: 2 Overlap #: 17 Alignment: -GATACAAAATCAATGTR-- AAGTCCAAGATCAAGGTGYY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 19 Combined Motif Original Motif Original Motif ARRTMCAARATCAABGTRYY CACCAGGAGATTATATCCCR ARRTMCAAMAYCARGRKAYTATATCCCR Direction: Forward Position #: 9 Overlap #: 12 Alignment: ARRTMCAARATCAABGTRYY-------- --------CACCAGGAGATTATATCCCR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 202 Combined Motif Reverse Complement Reverse Complement MGGGATATAMTYKCKTGKTRTTGYAKMT GAAACTGCTTTGTGATGTGT MGGGATATAMTYGMDWSTKCTTKBWGATGTGT Direction: Forward Position #: 13 Overlap #: 16 Alignment: MGGGATATAMTYKCKTGKTRTTGYAKMT---- ------------GAAACTGCTTTGTGATGTGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 58 Combined Motif Original Motif Original Motif MGGGATATAMTYGMDWSTKCTTKBWGATGTGT ATGGACAYTTRGGTTGHTTC MGGGATATAMTYGMATGKDCWTTTAGRTKKGTTC Direction: Forward Position #: 15 Overlap #: 18 Alignment: MGGGATATAMTYGMDWSTKCTTKBWGATGTGT-- --------------ATGGACAYTTRGGTTGHTTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 327 Combined Motif Reverse Complement Original Motif GAACRRAMCTAAAWGDYCATYCKAYTATATCCCR AGGAGGAAGTCAATTTC GAACRRAMCTAAAWGASSAKGMRRTYAWWTYCCR Direction: Forward Position #: 16 Overlap #: 17 Alignment: GAACRRAMCTAAAWGDYCATYCKAYTATATCCCR ---------------AGGAGGAAGTCAATTTC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 234 Combined Motif Original Motif Reverse Complement GAACRRAMCTAAAWGASSAKGMRRTYAWWTYCCR GTGTCKGGAGTTTGTTCCTT GAACRRAMCTAAAWGRKGWSKDGAKTWTDTTCCKT Direction: Forward Position #: 16 Overlap #: 19 Alignment: GAACRRAMCTAAAWGASSAKGMRRTYAWWTYCCR- ---------------GTGTCKGGAGTTTGTTCCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 290 Combined Motif Original Motif Reverse Complement GAACRRAMCTAAAWGRKGWSKDGAKTWTDTTCCKT CTGTTTGCCTGGGTATCA GAACRRAMCTAAAWGVTGTTTGSMTKRKTWTCMKT Direction: Forward Position #: 16 Overlap #: 18 Alignment: GAACRRAMCTAAAWGRKGWSKDGAKTWTDTTCCKT ---------------CTGTTTGCCTGGGTATCA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 333 Combined Motif Original Motif Original Motif GAACRRAMCTAAAWGVTGTTTGSMTKRKTWTCMKT TAGATAATAGCTCCAGCTTT GAACRRAMCTAAAWGTWGWTWRTAKCTCYAKCHTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: GAACRRAMCTAAAWGVTGTTTGSMTKRKTWTCMKT ---------------TAGATAATAGCTCCAGCTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 106 Combined Motif Original Motif Reverse Complement GAACRRAMCTAAAWGTWGWTWRTAKCTCYAKCHTT GGGATTGTAAATACACCAAT GAACRRAMCTAAAWGKGGATTGTADMTVCACCAWT Direction: Forward Position #: 16 Overlap #: 20 Alignment: GAACRRAMCTAAAWGTWGWTWRTAKCTCYAKCHTT ---------------GGGATTGTAAATACACCAAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 356 Combined Motif Reverse Complement Reverse Complement AWTGGTGBAYDTACAATCCYCWTTTAGRTKKGTTC CAGTCTGTGTCTTTTAATT AWTGGTGBAYDTACAMWSTCYDTKTMKDTTRATTC Direction: Forward Position #: 16 Overlap #: 19 Alignment: AWTGGTGBAYDTACAATCCYCWTTTAGRTKKGTTC ---------------CAGTCTGTGTCTTTTAATT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 262 Combined Motif Original Motif Original Motif AWTGGTGBAYDTACAMWSTCYDTKTMKDTTRATTC CTCAGTGTTAATCTCCTGTC AWTGGTGBAYDTACACTCWSTGTTWATCTYHWKTC Direction: Forward Position #: 16 Overlap #: 20 Alignment: AWTGGTGBAYDTACAMWSTCYDTKTMKDTTRATTC ---------------CTCAGTGTTAATCTCCTGTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 179 Combined Motif Original Motif Original Motif AWTGGTGBAYDTACACTCWSTGTTWATCTYHWKTC AGGTCCTTCAGGAGGTATTC AWTGGTGBAYDTACAMKSTCYKTYARKAKGTATTC Direction: Forward Position #: 16 Overlap #: 20 Alignment: AWTGGTGBAYDTACACTCWSTGTTWATCTYHWKTC ---------------AGGTCCTTCAGGAGGTATTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 336 Combined Motif Reverse Complement Reverse Complement GAATACRTYMTKARKGASYYTGTADMTVCACCAWT CAGGTGGTKTTTGGTTACAT GAATACRTYMTKARKSAGBTKGTRTTTGSWTMMAT Direction: Forward Position #: 16 Overlap #: 20 Alignment: GAATACRTYMTKARKGASYYTGTADMTVCACCAWT ---------------CAGGTGGTKTTTGGTTACAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 349 Combined Motif Reverse Complement Reverse Complement ATRRAWSCAAAKACYABCTSYKTYARKAKGTATTC TTCAMTCATGATTTGGCTCT ATRRAWSCAAAKACYWYCWVTYWTRATTTGKMTYY Direction: Forward Position #: 16 Overlap #: 20 Alignment: ATRRAWSCAAAKACYABCTSYKTYARKAKGTATTC ---------------TTCAMTCATGATTTGGCTCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 7 Combined Motif Original Motif Reverse Complement ATRRAWSCAAAKACYWYCWVTYWTRATTTGKMTYY TTTYTWTTTTTTYTWGAGAC ATRRAWSCAAAKACYTTYWBTTTTTWTTTDGAKHY Direction: Forward Position #: 16 Overlap #: 20 Alignment: ATRRAWSCAAAKACYWYCWVTYWTRATTTGKMTYY ---------------TTTYTWTTTTTTYTWGAGAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 357 Combined Motif Original Motif Reverse Complement ATRRAWSCAAAKACYTTYWBTTTTTWTTTDGAKHY TAATTTTATGTGTCAACTTG ATRRAWSCAAAKACYTWHTTTTWTKTKTYARMTTB Direction: Forward Position #: 16 Overlap #: 20 Alignment: ATRRAWSCAAAKACYTTYWBTTTTTWTTTDGAKHY ---------------TAATTTTATGTGTCAACTTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 86 Combined Motif Original Motif Reverse Complement ATRRAWSCAAAKACYTWHTTTTWTKTKTYARMTTB VMATTTAKTGAGCACCTACT ATRRAWSCAAAKACYWHATTTWDTGWGYHMMYDYK Direction: Forward Position #: 16 Overlap #: 20 Alignment: ATRRAWSCAAAKACYTWHTTTTWTKTKTYARMTTB ---------------VMATTTAKTGAGCACCTACT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 145 Combined Motif Original Motif Reverse Complement ATRRAWSCAAAKACYWHATTTWDTGWGYHMMYDYK TYTGTCMTTTTGTGACTGGC ATRRAWSCAAAKACYTHWKTYHTTKTGTDHCTGBY Direction: Forward Position #: 16 Overlap #: 20 Alignment: ATRRAWSCAAAKACYWHATTTWDTGWGYHMMYDYK ---------------TYTGTCMTTTTGTGACTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 66 Combined Motif Original Motif Reverse Complement ATRRAWSCAAAKACYTHWKTYHTTKTGTDHCTGBY TGTGTGTGTGTKTGTGTGT ATRRAWSCAAAKACYTBTKTBTKTKTGTGTBTGTY Direction: Forward Position #: 16 Overlap #: 19 Alignment: ATRRAWSCAAAKACYTHWKTYHTTKTGTDHCTGBY ---------------TGTGTGTGTGTKTGTGTGT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 99 Combined Motif Original Motif Reverse Complement ATRRAWSCAAAKACYTBTKTBTKTKTGTGTBTGTY AATGAKATCATGTCYTTTGC ATRRAWSCAAAKACYWATGWKWTYRTGTSYTTKKC Direction: Forward Position #: 16 Overlap #: 20 Alignment: ATRRAWSCAAAKACYTBTKTBTKTKTGTGTBTGTY ---------------AATGAKATCATGTCYTTTGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 14 Combined Motif Reverse Complement Original Motif GYRAAMSACAMMAWYWCATWKGTRTTTGSWTMMAT ACCTGGAAAATCGGGTCACT GYRAAMSACAMMAWYACMTGGRWAATYGGKTCAMT Direction: Forward Position #: 16 Overlap #: 20 Alignment: GYRAAMSACAMMAWYWCATWKGTRTTTGSWTMMAT ---------------ACCTGGAAAATCGGGTCACT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 329 Combined Motif Original Motif Reverse Complement GYRAAMSACAMMAWYACMTGGRWAATYGGKTCAMT GCTAATATATCCCTCCC GYRAAMSACAMMAWYRCYWAKATATYCSKCYCAMT Direction: Forward Position #: 16 Overlap #: 17 Alignment: GYRAAMSACAMMAWYACMTGGRWAATYGGKTCAMT ---------------GCTAATATATCCCTCCC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 85 Combined Motif Reverse Complement Original Motif ARTGKGRSGKATATRTWMGMKWTYRTGTSYTTKKC CTAGACATAAAGGTTCTCCA ARTGKGRSGKATATRYTAGABATAAWGKYTYTYSM Direction: Forward Position #: 16 Overlap #: 20 Alignment: ARTGKGRSGKATATRTWMGMKWTYRTGTSYTTKKC ---------------CTAGACATAAAGGTTCTCCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 104 Combined Motif Original Motif Reverse Complement ARTGKGRSGKATATRYTAGABATAAWGKYTYTYSM CTCCAGKTMCATCCATGTTG ARTGKGRSGKATATRCTMSABDTMMAKBCWYKTBV Direction: Forward Position #: 16 Overlap #: 20 Alignment: ARTGKGRSGKATATRYTAGABATAAWGKYTYTYSM ---------------CTCCAGKTMCATCCATGTTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 225 Combined Motif Reverse Complement Original Motif VVARMWGBRTRYADBTSRAGKATATYCSKCYCAMT GCACATGTAYCCYAGAACTT VVARMWGBRTRYADBKCAMRTRTAYCCCDGMMMYT Direction: Forward Position #: 16 Overlap #: 20 Alignment: VVARMWGBRTRYADBTSRAGKATATYCSKCYCAMT ---------------GCACATGTAYCCYAGAACTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 154 Combined Motif Original Motif Reverse Complement VVARMWGBRTRYADBKCAMRTRTAYCCCDGMMMYT TCCTATGAGAATCTAATG VVARMWGBRTRYADBKCMTATGWRAMYCTAAWSYT Direction: Forward Position #: 16 Overlap #: 18 Alignment: VVARMWGBRTRYADBKCAMRTRTAYCCCDGMMMYT ---------------TCCTATGAGAATCTAATG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 109 Combined Motif Reverse Complement Reverse Complement AMSWTTAGMYTMWCATAYGRBDTMMAKBCWYKTBV TCTCTCTCTCTCTCTCTCTC AMSWTTAGMYTMWCATMTSDSTYTCWBTCTCTYTC Direction: Forward Position #: 16 Overlap #: 20 Alignment: AMSWTTAGMYTMWCATAYGRBDTMMAKBCWYKTBV ---------------TCTCTCTCTCTCTCTCTCTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 63 Combined Motif Reverse Complement Original Motif GAKAGAGABWGAKASDSARATGWRAMYCTAAWSYT AGTGAGAACATRYRRTRTTT GAKAGAGABWGAKASAGWGAKRAVATDCDRWDBTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: GAKAGAGABWGAKASDSARATGWRAMYCTAAWSYT ---------------AGTGAGAACATRYRRTRTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 102 Combined Motif Original Motif Reverse Complement GAKAGAGABWGAKASAGWGAKRAVATDCDRWDBTT GTTGTGAGGATTAAATGAG GAKAGAGABWGAKASRKTGWGARSATTMAATGWKT Direction: Forward Position #: 16 Overlap #: 19 Alignment: GAKAGAGABWGAKASAGWGAKRAVATDCDRWDBTT ---------------GTTGTGAGGATTAAATGAG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 310 Combined Motif Original Motif Reverse Complement GAKAGAGABWGAKASRKTGWGARSATTMAATGWKT GGATTTMKGACTTGCATGGG GAKAGAGABWGAKASGGWKTTMKGAYTTRMWKGGK Direction: Forward Position #: 16 Overlap #: 20 Alignment: GAKAGAGABWGAKASRKTGWGARSATTMAATGWKT ---------------GGATTTMKGACTTGCATGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 137 Combined Motif Original Motif Original Motif GAKAGAGABWGAKASGGWKTTMKGAYTTRMWKGGK AGGTTTGTTACATAGGTAWA GAKAGAGABWGAKASRGDTTTRTKACWTRVRTADD Direction: Forward Position #: 16 Overlap #: 20 Alignment: GAKAGAGABWGAKASGGWKTTMKGAYTTRMWKGGK ---------------AGGTTTGTTACATAGGTAWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 62 Combined Motif Original Motif Original Motif GAKAGAGABWGAKASRGDTTTRTKACWTRVRTADD AGGAACAGCTCCRGTCTAC GAKAGAGABWGAKASAGGWWYAKYWCHDGTCTABD Direction: Forward Position #: 16 Overlap #: 19 Alignment: GAKAGAGABWGAKASRGDTTTRTKACWTRVRTADD ---------------AGGAACAGCTCCRGTCTAC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 195 Combined Motif Reverse Complement Reverse Complement DBTAGACDDGWKYTKWWCCTSTYTCWBTCTCTYTC ACCCAATWTGTAGTCTTTTA DBTAGACDDGWKYTKAHCCWVTYTSTHKYHYTTTM Direction: Forward Position #: 16 Overlap #: 20 Alignment: DBTAGACDDGWKYTKWWCCTSTYTCWBTCTCTYTC ---------------ACCCAATWTGTAGTCTTTTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 84 Combined Motif Reverse Complement Original Motif YAAAMDMYHASAMABWGGDTYAKYWCHDGTCTABD CTGGGTCCCCCAGCAGTGCC YAAAMDMYHASAMABMKGGKTMSCYCAGSAGTRCH Direction: Forward Position #: 16 Overlap #: 20 Alignment: YAAAMDMYHASAMABWGGDTYAKYWCHDGTCTABD ---------------CTGGGTCCCCCAGCAGTGCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 211 Combined Motif Original Motif Reverse Complement YAAAMDMYHASAMABMKGGKTMSCYCAGSAGTRCH CGGCTTCATTCTTGAAGTC YAAAMDMYHASAMABCKGSTTCMYTCDKGARKKCH Direction: Forward Position #: 16 Overlap #: 19 Alignment: YAAAMDMYHASAMABMKGGKTMSCYCAGSAGTRCH ---------------CGGCTTCATTCTTGAAGTC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 307 Combined Motif Original Motif Reverse Complement YAAAMDMYHASAMABCKGSTTCMYTCDKGARKKCH AGAGCTCTGGCTGGCATCT YAAAMDMYHASAMABAGRGYTCHGKCTKGMATBYH Direction: Forward Position #: 16 Overlap #: 19 Alignment: YAAAMDMYHASAMABCKGSTTCMYTCDKGARKKCH ---------------AGAGCTCTGGCTGGCATCT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 55 Combined Motif Original Motif Original Motif YAAAMDMYHASAMABAGRGYTCHGKCTKGMATBYH ATGGAATAYTATTCAGCCAT YAAAMDMYHASAMABAKGGAWYABTMTKSARYCWT Direction: Forward Position #: 16 Overlap #: 20 Alignment: YAAAMDMYHASAMABAGRGYTCHGKCTKGMATBYH ---------------ATGGAATAYTATTCAGCCAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 70 Combined Motif Reverse Complement Original Motif AWGKMTSRARABTMWTCCRTVTYTSTHKYHYTTTM CTATTGTGAATARTGCTGC AWGKMTSRARABTMWYYMWTRTBWRTAGTVYTKYM Direction: Forward Position #: 16 Overlap #: 19 Alignment: AWGKMTSRARABTMWTCCRTVTYTSTHKYHYTTTM ---------------CTATTGTGAATARTGCTGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 331 Combined Motif Original Motif Original Motif AWGKMTSRARABTMWYYMWTRTBWRTAGTVYTKYM CCACCACAGCTCAAGGAGGC AWGKMTSRARABTMWCCACYRYARCTMAWGSWGGC Direction: Forward Position #: 16 Overlap #: 20 Alignment: AWGKMTSRARABTMWYYMWTRTBWRTAGTVYTKYM ---------------CCACCACAGCTCAAGGAGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 254 Combined Motif Original Motif Reverse Complement AWGKMTSRARABTMWCCACYRYARCTMAWGSWGGC ATAGGAATGCTTGTGATTTT AWGKMTSRARABTMWMYABBAAWGCTHRTGATKTY Direction: Forward Position #: 16 Overlap #: 20 Alignment: AWGKMTSRARABTMWCCACYRYARCTMAWGSWGGC ---------------ATAGGAATGCTTGTGATTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 100 Combined Motif Original Motif Original Motif AWGKMTSRARABTMWMYABBAAWGCTHRTGATKTY GCTGGCCCGCAAGCGCCGCG AWGKMTSRARABTMWVCWGGMCYGCWAGYGCYKYB Direction: Forward Position #: 16 Overlap #: 20 Alignment: AWGKMTSRARABTMWMYABBAAWGCTHRTGATKTY ---------------GCTGGCCCGCAAGCGCCGCG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 201 Combined Motif Original Motif Original Motif AWGKMTSRARABTMWVCWGGMCYGCWAGYGCYKYB GTAACACTCACCGCGARGGT AWGKMTSRARABTMWGYARSACTSMHHGCGADGGT Direction: Forward Position #: 16 Overlap #: 20 Alignment: AWGKMTSRARABTMWVCWGGMCYGCWAGYGCYKYB ---------------GTAACACTCACCGCGARGGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 193 Combined Motif Reverse Complement Original Motif ACCDTCGCDDYSAGTSKTMCWYABTMTKSARYCWT ATACAATGGGGGTACAGRC ACCDTCGCDDYSAGTVTWMMATRGKVKTMMAGVHT Direction: Forward Position #: 16 Overlap #: 19 Alignment: ACCDTCGCDDYSAGTSKTMCWYABTMTKSARYCWT ---------------ATACAATGGGGGTACAGRC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 261 Combined Motif Original Motif Original Motif ACCDTCGCDDYSAGTVTWMMATRGKVKTMMAGVHT ATCTCASAAATCACCACTA ACCDTCGCDDYSAGTATMYCAYARDTYWCCACTAT Direction: Forward Position #: 16 Overlap #: 19 Alignment: ACCDTCGCDDYSAGTVTWMMATRGKVKTMMAGVHT ---------------ATCTCASAAATCACCACTA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 292 Combined Motif Original Motif Reverse Complement ACCDTCGCDDYSAGTATMYCAYARDTYWCCACTAT TTGTCCCACTGGAAGGTCTT ACCDTCGCDDYSAGTWTVTCMCACTGGAASRYCWT Direction: Forward Position #: 16 Overlap #: 20 Alignment: ACCDTCGCDDYSAGTATMYCAYARDTYWCCACTAT ---------------TTGTCCCACTGGAAGGTCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 16 Combined Motif Original Motif Reverse Complement ACCDTCGCDDYSAGTWTVTCMCACTGGAASRYCWT GGGTCAGGGAGTTCCCTTTC ACCDTCGCDDYSAGTGKGTCASRGAGTWCCSTTTY Direction: Forward Position #: 16 Overlap #: 20 Alignment: ACCDTCGCDDYSAGTWTVTCMCACTGGAASRYCWT ---------------GGGTCAGGGAGTTCCCTTTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 129 Combined Motif Original Motif Reverse Complement ACCDTCGCDDYSAGTGKGTCASRGAGTWCCSTTTY TGAGKCAATTAAACCTCTT ACCDTCGCDDYSAGTTGRKBMRADWRWACCBYTTY Direction: Forward Position #: 16 Overlap #: 19 Alignment: ACCDTCGCDDYSAGTGKGTCASRGAGTWCCSTTTY ---------------TGAGKCAATTAAACCTCTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 171 Combined Motif Original Motif Reverse Complement ACCDTCGCDDYSAGTTGRKBMRADWRWACCBYTTY ACTTTGGACTGTGGACTTTT ACCDTCGCDDYSAGTWSWTTSGACTGTRSMCTTTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: ACCDTCGCDDYSAGTTGRKBMRADWRWACCBYTTY ---------------ACTTTGGACTGTGGACTTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 332 Combined Motif Reverse Complement Original Motif AAAAGYSMACAGTCSAAWSWACTSMHHGCGADGGT CTGGCCCTCAATGGTTAAAC AAAAGYSMACAGTCSMWGGYMCTCAATGSKWARRY Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAAAGYSMACAGTCSAAWSWACTSMHHGCGADGGT ---------------CTGGCCCTCAATGGTTAAAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 83 Combined Motif Reverse Complement Reverse Complement KKKTWRSCATTGAGRKCCWRSGACTGTRSMCTTTT GTKTMTATMTACCACATTTT KKKTWRSCATTGAGRGYBTVBRWMTRYVAMMTTTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: KKKTWRSCATTGAGRKCCWRSGACTGTRSMCTTTT ---------------GTKTMTATMTACCACATTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 5 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 5 Motif 26 Original Motif Original Motif CCTCRGCCTCC CTCCTGCCTCAGCCTCCCRA CTCCTGCCTCAGCCTCCCRA Direction: Forward Position #: 7 Overlap #: 11 Alignment: ------CCTCRGCCTCC--- CTCCTGCCTCAGCCTCCCRA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 105 Original Motif Original Motif CTCCTGCCTCAGCCTCCCRA GCCTCTCCCTCCACACCTCC GCYYCTSCCTCMRCMYCYCCA Direction: Forward Position #: 2 Overlap #: 19 Alignment: -CTCCTGCCTCAGCCTCCCRA GCCTCTCCCTCCACACCTCC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 165 Combined Motif Original Motif Reverse Complement GCYYCTSCCTCMRCMYCYCCA AGCTCMKCCTCCTGTCAGAT GCYYCTSCMKCHVCVCCTCCWGTCAGAT Direction: Forward Position #: 9 Overlap #: 13 Alignment: GCYYCTSCCTCMRCMYCYCCA------- --------AGCTCMKCCTCCTGTCAGAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 273 Combined Motif Original Motif Reverse Complement GCYYCTSCMKCHVCVCCTCCWGTCAGAT GTAGGCCTAGGCT GCYYCTSCMKCHGYASSYCYAGKCWGAT Direction: Forward Position #: 13 Overlap #: 13 Alignment: GCYYCTSCMKCHVCVCCTCCWGTCAGAT ------------GTAGGCCTAGGCT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 47 Combined Motif Reverse Complement Reverse Complement ATCWGYCTMGKSSTMCHGRYGSAGMKGC MGGAAACTGAGGC ATCWGYCTMGKSVKVMARMTGARGCKGC Direction: Forward Position #: 13 Overlap #: 13 Alignment: ATCWGYCTMGKSSTMCHGRYGSAGMKGC ------------MGGAAACTGAGGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 13 Combined Motif Original Motif Reverse Complement ATCWGYCTMGKSVKVMARMTGARGCKGC GGCAATGCCTCGCCCTGCTT ATCWGYCTMGKSGGCAATGYSWVGCCSYGCTT Direction: Forward Position #: 13 Overlap #: 16 Alignment: ATCWGYCTMGKSVKVMARMTGARGCKGC---- ------------GGCAATGCCTCGCCCTGCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 283 Combined Motif Original Motif Reverse Complement ATCWGYCTMGKSGGCAATGYSWVGCCSYGCTT GGATGGTGAGGGC ATCWGYCTMGKSGGSRATGBTGAGSGCYGCTT Direction: Forward Position #: 15 Overlap #: 13 Alignment: ATCWGYCTMGKSGGCAATGYSWVGCCSYGCTT --------------GGATGGTGAGGGC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 178 Combined Motif Reverse Complement Original Motif AAGCMGCSCTCABCATMSCCSYCYAGKCWGAT ACTGTCTTCCACCTCCACAT AAGCMGCSCTCABCAYHGYCTTCYASBYHSAYAT Direction: Forward Position #: 15 Overlap #: 18 Alignment: AAGCMGCSCTCABCATMSCCSYCYAGKCWGAT-- --------------ACTGTCTTCCACCTCCACAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 89 Combined Motif Original Motif Reverse Complement AAGCMGCSCTCABCAYHGYCTTCYASBYHSAYAT TACACCCTCCGCAGCC AAGCMGCSCTCABCATACWCCYYCMGCAGCMYAT Direction: Forward Position #: 16 Overlap #: 16 Alignment: AAGCMGCSCTCABCAYHGYCTTCYASBYHSAYAT ---------------TACACCCTCCGCAGCC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 187 Combined Motif Reverse Complement Original Motif ATMYGCTGCYGMKGGWGTATGBTGAGSGCYGCTT TCTCTGAGCCTCAGTT ATMYGCTGCYGMKGGTCTMTGDGSMKCVSTKCTT Direction: Forward Position #: 16 Overlap #: 16 Alignment: ATMYGCTGCYGMKGGWGTATGBTGAGSGCYGCTT ---------------TCTCTGAGCCTCAGTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 221 Combined Motif Reverse Complement Reverse Complement AAGYASBGRRSCDCARAGACCYYCMGCAGCMYAT GTGTCCCCTTCCTCCC AAGYASBGRRSCDCAGWGWCCCCYHSCTCCCYAT Direction: Forward Position #: 16 Overlap #: 16 Alignment: AAGYASBGRRSCDCARAGACCYYCMGCAGCMYAT ---------------GTGTCCCCTTCCTCCC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 64 Combined Motif Reverse Complement Reverse Complement ATMGGGAGSHMGGGGWCWCTGDGSMKCVSTKCTT KCCGGGCCTTAGCTGCCTTC ATMGGGAGSHMGGGGDCMSKGCSTYDSCTKSCTTC Direction: Forward Position #: 16 Overlap #: 19 Alignment: ATMGGGAGSHMGGGGWCWCTGDGSMKCVSTKCTT- ---------------KCCGGGCCTTAGCTGCCTTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 122 Combined Motif Original Motif Original Motif ATMGGGAGSHMGGGGDCMSKGCSTYDSCTKSCTTC CCTTGGCCAGCCCAGAAAG ATMGGGAGSHMGGGGCCTBGGCCWKCCCWGVMWKC Direction: Forward Position #: 16 Overlap #: 19 Alignment: ATMGGGAGSHMGGGGDCMSKGCSTYDSCTKSCTTC ---------------CCTTGGCCAGCCCAGAAAG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 161 Combined Motif Reverse Complement Reverse Complement GYWRBCWGGGYWGGCCVAGGCCCCYHSCTCCCYAT VCCDCCTCCKCCTCCTC GYWRBCWGGGYWGGCCCMGSCYCCTHCYYCYCYAT Direction: Forward Position #: 16 Overlap #: 17 Alignment: GYWRBCWGGGYWGGCCVAGGCCCCYHSCTCCCYAT ---------------VCCDCCTCCKCCTCCTC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 326 Combined Motif Reverse Complement Original Motif ATMGKGKMGDAGGKGSCYGGGCCWKCCCWGVMWKC GACATGGAGTCAAAGG ATMGKGKMGDAGGKGGMCATGSMRTCMMAGRMWKC Direction: Forward Position #: 16 Overlap #: 16 Alignment: ATMGKGKMGDAGGKGSCYGGGCCWKCCCWGVMWKC ---------------GACATGGAGTCAAAGG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 163 Combined Motif Reverse Complement Reverse Complement GYWRMCTYYGAMYSCATGYCCYCCTHCYYCYCYAT GGAGCCCACGGAGG GYWRMCTYYGAMYSCGGRKCCCMCGGMBBCYCYAT Direction: Forward Position #: 16 Overlap #: 14 Alignment: GYWRMCTYYGAMYSCATGYCCYCCTHCYYCYCYAT ---------------GGAGCCCACGGAGG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 149 Combined Motif Original Motif Original Motif GYWRMCTYYGAMYSCGGRKCCCMCGGMBBCYCYAT ACTCAGCCCRCCTGCACCC GYWRMCTYYGAMYSCRSTCMSCCCGCCTGCHCCMT Direction: Forward Position #: 16 Overlap #: 19 Alignment: GYWRMCTYYGAMYSCGGRKCCCMCGGMBBCYCYAT ---------------ACTCAGCCCRCCTGCACCC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 43 Combined Motif Original Motif Original Motif GYWRMCTYYGAMYSCRSTCMSCCCGCCTGCHCCMT GCCAGGCAGAGRGKCTCCT GYWRMCTYYGAMYSCGCYVRGCMSRGVKKCTCCYT Direction: Forward Position #: 16 Overlap #: 19 Alignment: GYWRMCTYYGAMYSCRSTCMSCCCGCCTGCHCCMT ---------------GCCAGGCAGAGRGKCTCCT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 15 Combined Motif Reverse Complement Original Motif AMGGAGYYVCKSYGCMBKGCGSMRTCMMAGRMWKC CTTGCGCTTCCCRRGTGA AMGGAGYYVCKSYGCCTTGCGCTTYCCRAGTGAKC Direction: Forward Position #: 16 Overlap #: 18 Alignment: AMGGAGYYVCKSYGCMBKGCGSMRTCMMAGRMWKC ---------------CTTGCGCTTCCCRRGTGA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 203 Combined Motif Reverse Complement Reverse Complement GYTCACTKGGKAAGCGCAAGGCMSRGVKKCTCCYT GGACGCCATGG GYTCACTKGGKAAGCGSAMGSCABGGVKKCTCCYT Direction: Forward Position #: 16 Overlap #: 11 Alignment: GYTCACTKGGKAAGCGCAAGGCMSRGVKKCTCCYT ---------------GGACGCCATGG--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 53 Combined Motif Reverse Complement Reverse Complement AMGGAGYYVCCVTGSCRTSCGCTTYCCRAGTGAKC CTTGGGTGGTCGATGGGAC AMGGAGYYVCCVTGSCKTGSGYKGTCSAWGGGASC Direction: Forward Position #: 16 Overlap #: 19 Alignment: AMGGAGYYVCCVTGSCRTSCGCTTYCCRAGTGAKC ---------------CTTGGGTGGTCGATGGGAC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 39 Combined Motif Reverse Complement Reverse Complement GSTCCCWTSGACYMCSCARGSCABGGVKKCTCCYT CCTCCCAGCCGCCT GSTCCCWTCSWCCCMGCMGSCYABGGVKKCTCCYT Direction: Forward Position #: 9 Overlap #: 14 Alignment: GSTCCCWTSGACYMCSCARGSCABGGVKKCTCCYT --------CCTCCCAGCCGCCT------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 92 Combined Motif Original Motif Reverse Complement GSTCCCWTCSWCCCMGCMGSCYABGGVKKCTCCYT GGTGGGGGGGTCAGCCCCC GSTCCCWTCSWCCCMGSHGGSKRGGKCDGCYCCCT Direction: Forward Position #: 16 Overlap #: 19 Alignment: GSTCCCWTCSWCCCMGCMGSCYABGGVKKCTCCYT ---------------GGTGGGGGGGTCAGCCCCC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 286 Combined Motif Reverse Complement Original Motif AGGGKGCDGRCCMYSCCHSCRGGGWSGAWGGGASC CAGGCGGCTGGGAG AGGGKGCDGRCCMYSCMVGCGGSKGGGAKGGGASC Direction: Forward Position #: 16 Overlap #: 14 Alignment: AGGGKGCDGRCCMYSCCHSCRGGGWSGAWGGGASC ---------------CAGGCGGCTGGGAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 98 Combined Motif Original Motif Original Motif AGGGKGCDGRCCMYSCMVGCGGSKGGGAKGGGASC AGTTCCGGGTGGGCGTGGG AGGGKGCDGRCCMYSMRTKCSGGGTGGRBGKGRGC Direction: Forward Position #: 16 Overlap #: 19 Alignment: AGGGKGCDGRCCMYSCMVGCGGSKGGGAKGGGASC ---------------AGTTCCGGGTGGGCGTGGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 121 Combined Motif Original Motif Reverse Complement AGGGKGCDGRCCMYSMRTKCSGGGTGGRBGKGRGC TGGAGGTTSTAG AGGGKGCDGRCCMYSTGGASGKKGTRGRBGKGRGC Direction: Forward Position #: 16 Overlap #: 12 Alignment: AGGGKGCDGRCCMYSMRTKCSGGGTGGRBGKGRGC ---------------TGGAGGTTSTAG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 62 Combined Motif Reverse Complement Reverse Complement GCMCRCBMCKACRRCSTCCASKRGGKCDGCYCCCT GTAGACKGGAGCTGTTCCT GCMCRCBMCKACRRCGTMSACKGGRGCTGYTCCYT Direction: Forward Position #: 16 Overlap #: 19 Alignment: GCMCRCBMCKACRRCSTCCASKRGGKCDGCYCCCT ---------------GTAGACKGGAGCTGTTCCT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 313 Combined Motif Reverse Complement Reverse Complement AMGGAMCAGCKCCYGTSYACGKKGTRGRBGKGRGC MGCTGAGGCAGGAG AMGGAMCAGCKCCYGWGCWSRGGCWGGAGGKGRGC Direction: Forward Position #: 16 Overlap #: 14 Alignment: AMGGAMCAGCKCCYGTSYACGKKGTRGRBGKGRGC ---------------MGCTGAGGCAGGAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 17 Combined Motif Reverse Complement Reverse Complement GCMCRCCTCCWGCCKSWGCWCKGGRGCTGYTCCYT TGHCCTGCKCCCACTGTCT GCMCRCCTCCWGCCKYRDCCYGSGMSCASTKYCTT Direction: Forward Position #: 16 Overlap #: 19 Alignment: GCMCRCCTCCWGCCKSWGCWCKGGRGCTGYTCCYT ---------------TGHCCTGCKCCCACTGTCT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 312 Combined Motif Original Motif Reverse Complement GCMCRCCTCCWGCCKYRDCCYGSGMSCASTKYCTT CCCMKGGCACCCTCAGTCCT GCMCRCCTCCWGCCKCVCCBKGCRCCCWCWGTCYT Direction: Forward Position #: 16 Overlap #: 20 Alignment: GCMCRCCTCCWGCCKYRDCCYGSGMSCASTKYCTT ---------------CCCMKGGCACCCTCAGTCCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 56 Combined Motif Reverse Complement Reverse Complement AKGACWGWGGGKGCYBGGVGRGGCWGGAGGKGRGC GCCKGGMKCMGTGGCTCAKG AKGACWGWGGGKGCYGSVBGGVGCHGKRGSTSAKS Direction: Forward Position #: 16 Overlap #: 20 Alignment: AKGACWGWGGGKGCYBGGVGRGGCWGGAGGKGRGC ---------------GCCKGGMKCMGTGGCTCAKG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 155 Combined Motif Original Motif Original Motif AKGACWGWGGGKGCYGSVBGGVGCHGKRGSTSAKS TCCCTCCCGGACGGGGYGGC AKGACWGWGGGKGCYTCCCKSCBSGRBGGGKCRGC Direction: Forward Position #: 16 Overlap #: 20 Alignment: AKGACWGWGGGKGCYGSVBGGVGCHGKRGSTSAKS ---------------TCCCTCCCGGACGGGGYGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 245 Combined Motif Reverse Complement Original Motif GCMGYCCCBKCSBGSRGGGAKGCRCCCWCWGTCYT CAGACTGCCTCCTCAA GCMGYCCCBKCSBGSMRGRMTGCVYCCTCARTCYT Direction: Forward Position #: 16 Overlap #: 16 Alignment: GCMGYCCCBKCSBGSRGGGAKGCRCCCWCWGTCYT ---------------CAGACTGCCTCCTCAA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 215 Combined Motif Reverse Complement Reverse Complement AKGAKTGAGGMVGCARKCKRSCBSGRBGGGKCRGC GGGRSCACAGGAGCD AKGAKTGAGGMVGCAGGSDSCMCVGGHGSGKCRGC Direction: Forward Position #: 16 Overlap #: 15 Alignment: AKGAKTGAGGMVGCARKCKRSCBSGRBGGGKCRGC ---------------GGGRSCACAGGAGCD----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 49 Combined Motif Reverse Complement Original Motif GCMGYCSCHCCBGYGSDSCCTGCVYCCTCARTCYT ACATCTGYMMCC GCMGYCSCHCCBGYGVCAYCTGCMHCCTCARTCYT Direction: Forward Position #: 16 Overlap #: 12 Alignment: GCMGYCSCHCCBGYGSDSCCTGCVYCCTCARTCYT ---------------ACATCTGYMMCC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 67 Combined Motif Reverse Complement Original Motif AKGAKTGAGGDRGCAGMTGBCMCVGGHGSGKCRGC CTGGGCTCCTGAGTCTGGTG AKGAKTGAGGDRGCASWGGGCTCCKGAGYSTSGKS Direction: Forward Position #: 16 Overlap #: 20 Alignment: AKGAKTGAGGDRGCAGMTGBCMCVGGHGSGKCRGC ---------------CTGGGCTCCTGAGTCTGGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 82 Combined Motif Original Motif Reverse Complement AKGAKTGAGGDRGCASWGGGCTCCKGAGYSTSGKS GCTGGCCCKGGTGCTAAGC AKGAKTGAGGDRGCAGCTGGCCCBGGWGCYWRGBS Direction: Forward Position #: 16 Overlap #: 19 Alignment: AKGAKTGAGGDRGCASWGGGCTCCKGAGYSTSGKS ---------------GCTGGCCCKGGTGCTAAGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 22 Combined Motif Original Motif Reverse Complement AKGAKTGAGGDRGCAGCTGGCCCBGGWGCYWRGBS KMRGTCTGAGAT AKGAKTGAGGDRGCAGCDGKCTSAGRTGCYWRGBS Direction: Forward Position #: 16 Overlap #: 12 Alignment: AKGAKTGAGGDRGCAGCTGGCCCBGGWGCYWRGBS ---------------KMRGTCTGAGAT-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 365 Combined Motif Original Motif Reverse Complement AKGAKTGAGGDRGCAGCDGKCTSAGRTGCYWRGBS GTAGACCGGAGCT AKGAKTGAGGDRGCAGYAGWCYGGRGYKCYWRGBS Direction: Forward Position #: 16 Overlap #: 13 Alignment: AKGAKTGAGGDRGCAGCDGKCTSAGRTGCYWRGBS ---------------GTAGACCGGAGCT------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 206 Combined Motif Reverse Complement Original Motif SBCKWMGRKCKCCKGWCTMCTGCMHCCTCARTCYT GCTCCWGTGYGKCC SBCKWMGRKCKCCKGGCTCCTGYGYSBYCARTCYT Direction: Forward Position #: 16 Overlap #: 14 Alignment: SBCKWMGRKCKCCKGWCTMCTGCMHCCTCARTCYT ---------------GCTCCWGTGYGKCC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 58 Combined Motif Original Motif Reverse Complement SBCKWMGRKCKCCKGGCTCCTGYGYSBYCARTCYT GAAHCAACCKAAKTGTCCAT SBCKWMGRKCKCCKGGMWHCWRCSBAHBYRDYCMT Direction: Forward Position #: 16 Overlap #: 20 Alignment: SBCKWMGRKCKCCKGGCTCCTGYGYSBYCARTCYT ---------------GAAHCAACCKAAKTGTCCAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 68 Combined Motif Reverse Complement Reverse Complement AYGKDMMVHTVSGMWGDWRCCYGGRGYKCYWRGBS GACCTGCAGCCCGCCATG AYGKDMMVHTVSGMWGAYVYSCRGMSCGCCAWGBS Direction: Forward Position #: 16 Overlap #: 18 Alignment: AYGKDMMVHTVSGMWGDWRCCYGGRGYKCYWRGBS ---------------GACCTGCAGCCCGCCATG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 30 Combined Motif Reverse Complement Original Motif SBCWTGGCGSRCKGSMVKTCWRCSBAHBYRDYCMT AGGAGCGCCTCTKCCCGGC SBCWTGGCGSRCKGSAGGWSMGCCTCTKCCBBSCT Direction: Forward Position #: 16 Overlap #: 19 Alignment: SBCWTGGCGSRCKGSMVKTCWRCSBAHBYRDYCMT ---------------AGGAGCGCCTCTKCCCGGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 290 Combined Motif Original Motif Reverse Complement SBCWTGGCGSRCKGSAGGWSMGCCTCTKCCBBSCT CTGTTTGCCTGGGTATCA SBCWTGGCGSRCKGSMKGTKTGCCTSKGYATCRCT Direction: Forward Position #: 16 Overlap #: 18 Alignment: SBCWTGGCGSRCKGSAGGWSMGCCTCTKCCBBSCT ---------------CTGTTTGCCTGGGTATCA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 259 Combined Motif Original Motif Original Motif SBCWTGGCGSRCKGSMKGTKTGCCTSKGYATCRCT CCCACACCCTTATTA SBCWTGGCGSRCKGSCCSWYWSCCTKATTATCRCT Direction: Forward Position #: 16 Overlap #: 15 Alignment: SBCWTGGCGSRCKGSMKGTKTGCCTSKGYATCRCT ---------------CCCACACCCTTATTA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 164 Combined Motif Original Motif Original Motif SBCWTGGCGSRCKGSCCSWYWSCCTKATTATCRCT AGCCCCGGTTCCCGCYCGC SBCWTGGCGSRCKGSMGCMCHGSYTCMYKMYCRCT Direction: Forward Position #: 16 Overlap #: 19 Alignment: SBCWTGGCGSRCKGSCCSWYWSCCTKATTATCRCT ---------------AGCCCCGGTTCCCGCYCGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 160 Combined Motif Reverse Complement Original Motif AGMGMRYKRGAMSCDGRGCYSCRGMSCGCCAWGBS AAATTACCCAGTCTCAGGTA AGMGMRYKRGAMSCDRARYTVCCSAGYSYCAKGTR Direction: Forward Position #: 16 Overlap #: 20 Alignment: AGMGMRYKRGAMSCDGRGCYSCRGMSCGCCAWGBS ---------------AAATTACCCAGTCTCAGGTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 329 Combined Motif Reverse Complement Reverse Complement KACYTGMSMCTSGGBAMKTKHGSYTCMYKMYCRCT GCTAATATATCCCTCCC KACYTGMSMCTSGGBRCTWATRTHTCCCTCCCRCT Direction: Forward Position #: 16 Overlap #: 17 Alignment: KACYTGMSMCTSGGBAMKTKHGSYTCMYKMYCRCT ---------------GCTAATATATCCCTCCC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 1 Combined Motif Reverse Complement Original Motif AGMGGGAGGGAHAKATWAGMVCCSAGYSYCAKGTR GGGGTGACAGABGB AGVGGGWGRSABAKDDWAGMVCCSAGYSYCAKGTR Direction: Forward Position #: 3 Overlap #: 14 Alignment: AGMGGGAGGGAHAKATWAGMVCCSAGYSYCAKGTR --GGGGTGACAGABGB------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 291 Original Motif Original Motif AGVGGGWGRSABAKDDWAGMVCCSAGYSYCAKGTR CTGAGGACCTGAGGTCRTA CTGAGGASCKGRGGWCATAKDDWAGMVCCSAGYSYCAKGTR Direction: Forward Position #: 7 Overlap #: 13 Alignment: ------AGVGGGWGRSABAKDDWAGMVCCSAGYSYCAKGTR CTGAGGACCTGAGGTCRTA---------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 151 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 151 Motif 317 Reverse Complement Original Motif BCTACAATG ACATGCTACAACAT TGCTACAAYRACAT Direction: Backward Position #: 2 Overlap #: 9 Alignment: ----BCTACAATG- ACATGCTACAACAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 144 Original Motif Original Motif TGCTACAAYRACAT CCGCTGCACTGTGGGAGCCC CCGCTGYACTRYRRKARCMY Direction: Forward Position #: 7 Overlap #: 14 Alignment: ------TGCTACAAYRACAT CCGCTGCACTGTGGGAGCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 106 Combined Motif Original Motif Original Motif CCGCTGYACTRYRRKARCMY ATTGGTGTATTTACAATCCC CCGCTGYAMTDBGWGWAYYTACAATCCC Direction: Forward Position #: 9 Overlap #: 12 Alignment: CCGCTGYACTRYRRKARCMY-------- --------ATTGGTGTATTTACAATCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 344 Combined Motif Reverse Complement Original Motif GGGATTGTAMMTWCWCBDARTKCAGCGG CATAGGAGATGAC GGGATTGTAMMTHMTMGGAGWTSASCGG Direction: Forward Position #: 13 Overlap #: 13 Alignment: GGGATTGTAMMTWCWCBDARTKCAGCGG ------------CATAGGAGATGAC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 258 Combined Motif Original Motif Reverse Complement GGGATTGTAMMTHMTMGGAGWTSASCGG MTACACTGTTGGTGG GGGATTGTAMMTMTWMRVWGTTGRBSGG Direction: Forward Position #: 13 Overlap #: 15 Alignment: GGGATTGTAMMTHMTMGGAGWTSASCGG ------------MTACACTGTTGGTGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 309 Combined Motif Original Motif Reverse Complement GGGATTGTAMMTMTWMRVWGTTGRBSGG MTCCTCCAGACCCCAGAATG GGGATTGTAMMTMTMCWCMRKWSVCCRGAATG Direction: Forward Position #: 13 Overlap #: 16 Alignment: GGGATTGTAMMTMTWMRVWGTTGRBSGG---- ------------MTCCTCCAGACCCCAGAATG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 353 Combined Motif Original Motif Original Motif GGGATTGTAMMTMTMCWCMRKWSVCCRGAATG CACATGGAAGC GGGATTGTAMMTMTCMYMTGGAMGCCRGAATG Direction: Forward Position #: 15 Overlap #: 11 Alignment: GGGATTGTAMMTMTMCWCMRKWSVCCRGAATG --------------CACATGGAAGC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 300 Combined Motif Reverse Complement Original Motif CATTCKGGCYTCCAYKYGAYAYYTACAATCCC CATTTTACAGA CATTCKGGCYTCCACRTKWTACAKACAATCCC Direction: Forward Position #: 15 Overlap #: 11 Alignment: CATTCKGGCYTCCAYKYGAYAYYTACAATCCC --------------CATTTTACAGA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 256 Combined Motif Reverse Complement Original Motif GGGATTGTYTGTAWRAKGTGGAMGCCRGAATG RCAGTGTACACTGY GGGATTGTYTGTAWRMAGTGKAHRCYGSAATG Direction: Forward Position #: 15 Overlap #: 14 Alignment: GGGATTGTYTGTAWRAKGTGGAMGCCRGAATG --------------RCAGTGTACACTGY---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 322 Combined Motif Original Motif Reverse Complement GGGATTGTYTGTAWRMAGTGKAHRCYGSAATG GCAWSTGCAAAGGCCCT GGGATTGTYTGTAWGCADBKKMAAMGGCMMTG Direction: Forward Position #: 15 Overlap #: 17 Alignment: GGGATTGTYTGTAWRMAGTGKAHRCYGSAATG --------------GCAWSTGCAAAGGCCCT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 332 Combined Motif Reverse Complement Reverse Complement CAYRGCCYTTRYRVHTGCWTACAKACAATCCC GTTTAACCATTGAGGGCCAG CAYRGCCYTTRYRVBTKTAWMCATWSARKSCCAG Direction: Forward Position #: 15 Overlap #: 18 Alignment: CAYRGCCYTTRYRVHTGCWTACAKACAATCCC-- --------------GTTTAACCATTGAGGGCCAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 196 Combined Motif Original Motif Reverse Complement CAYRGCCYTTRYRVBTKTAWMCATWSARKSCCAG CAAGCCTSKGCAATGGCAGG CAYRGCCYTTRYRVBYAWRCCYVKDCAATGSCAGG Direction: Forward Position #: 16 Overlap #: 19 Alignment: CAYRGCCYTTRYRVBTKTAWMCATWSARKSCCAG- ---------------CAAGCCTSKGCAATGGCAGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 195 Combined Motif Original Motif Original Motif CAYRGCCYTTRYRVBYAWRCCYVKDCAATGSCAGG TAAAAGACTACAWATTGGGT CAYRGCCYTTRYRVBTAAAAVWCTACAAWKBSRGK Direction: Forward Position #: 16 Overlap #: 20 Alignment: CAYRGCCYTTRYRVBYAWRCCYVKDCAATGSCAGG ---------------TAAAAGACTACAWATTGGGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 282 Combined Motif Reverse Complement Reverse Complement RCKSVRWTTGTAGWVTTTTABBKKMAAMGGCMMTG TTTTAGTAGAGAC RCKSVRWTTGTAGWVTTTTAGTAGARAMGGCMMTG Direction: Forward Position #: 16 Overlap #: 13 Alignment: RCKSVRWTTGTAGWVTTTTABBKKMAAMGGCMMTG ---------------TTTTAGTAGAGAC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 211 Combined Motif Original Motif Original Motif RCKSVRWTTGTAGWVTTTTAGTAGARAMGGCMMTG GACTTCAAGAATGAAGCCG RCKSVRWTTGTAGWVKWYTWSWAGARWSRRGCCKG Direction: Forward Position #: 16 Overlap #: 19 Alignment: RCKSVRWTTGTAGWVTTTTAGTAGARAMGGCMMTG ---------------GACTTCAAGAATGAAGCCG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 193 Combined Motif Original Motif Reverse Complement RCKSVRWTTGTAGWVKWYTWSWAGARWSRRGCCKG GKCTGTACCCCCATTGTAT RCKSVRWTTGTAGWVKTCTKYAVSMMCATWGYMTG Direction: Forward Position #: 16 Overlap #: 19 Alignment: RCKSVRWTTGTAGWVKWYTWSWAGARWSRRGCCKG ---------------GKCTGTACCCCCATTGTAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 329 Combined Motif Reverse Complement Original Motif CAYMCWATGRYSBTMYAGAYVWCTACAAWKBSRGK GGGAGGGATATATTAGC CAYMCWATGRYSBTMGRGASGRMTAYAWTDGCRGK Direction: Forward Position #: 16 Overlap #: 17 Alignment: CAYMCWATGRYSBTMYAGAYVWCTACAAWKBSRGK ---------------GGGAGGGATATATTAGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 68 Combined Motif Reverse Complement Reverse Complement RCKGCDAWTMTAYMCSTCMCYAVSMMCATWGYMTG GACCTGCAGCCCGCCATG RCKGCDAWTMTAYMCGWCCTGMAGCCCRYYRTRTG Direction: Forward Position #: 16 Overlap #: 18 Alignment: RCKGCDAWTMTAYMCSTCMCYAVSMMCATWGYMTG ---------------GACCTGCAGCCCGCCATG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 270 Combined Motif Original Motif Reverse Complement RCKGCDAWTMTAYMCGWCCTGMAGCCCRYYRTRTG CCTMACAATCATGG RCKGCDAWTMTAYMCSMYCWSAAKCMYGGYRTRTG Direction: Forward Position #: 16 Overlap #: 14 Alignment: RCKGCDAWTMTAYMCGWCCTGMAGCCCRYYRTRTG ---------------CCTMACAATCATGG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 206 Combined Motif Original Motif Reverse Complement RCKGCDAWTMTAYMCSMYCWSAAKCMYGGYRTRTG GGRCKCACWGGAGC RCKGCDAWTMTAYMCGVDCDCAMDSRAGCYRTRTG Direction: Forward Position #: 16 Overlap #: 14 Alignment: RCKGCDAWTMTAYMCSMYCWSAAKCMYGGYRTRTG ---------------GGRCKCACWGGAGC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 191 Combined Motif Reverse Complement Original Motif CAMAKKGCTMSDRTGDGDVCGRMTAYAWTDGCRGK AAAGTGCCGAGAKTGCAGC CAMAKKGCTMSDRTGARAGYGCMKAGATTGSMGSK Direction: Forward Position #: 16 Overlap #: 19 Alignment: CAMAKKGCTMSDRTGDGDVCGRMTAYAWTDGCRGK ---------------AAAGTGCCGAGAKTGCAGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 4 Combined Motif Reverse Complement Reverse Complement RSCYSCAATCTRRGCMCTKTCAMDSRAGCYRTRTG CCTGTAATCCCAGC RSCYSCAATCTRRGCMCTGTMAYCCCAGCYRTRTG Direction: Forward Position #: 16 Overlap #: 14 Alignment: RSCYSCAATCTRRGCMCTKTCAMDSRAGCYRTRTG ---------------CCTGTAATCCCAGC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 212 Combined Motif Original Motif Reverse Complement RSCYSCAATCTRRGCMCTGTMAYCCCAGCYRTRTG MTTGACTACCCTA RSCYSCAATCTRRGCMYTGWCWACCCWRCYRTRTG Direction: Forward Position #: 16 Overlap #: 13 Alignment: RSCYSCAATCTRRGCMCTGTMAYCCCAGCYRTRTG ---------------MTTGACTACCCTA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 215 Combined Motif Original Motif Original Motif RSCYSCAATCTRRGCMYTGWCWACCCWRCYRTRTG HGCTCCTGTGSKCCC RSCYSCAATCTRRGCMGYKMCWRYSCTVCCRTRTG Direction: Forward Position #: 16 Overlap #: 15 Alignment: RSCYSCAATCTRRGCMYTGWCWACCCWRCYRTRTG ---------------HGCTCCTGTGSKCCC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 276 Combined Motif Reverse Complement Original Motif CAMAKGGVAGSMMWGRRKCRGCMKAGATTGSMGSK TGGCCTGTTAGGAA CAMAKGGVAGSMMWGTGGCCKGYTAGRAWGSMGSK Direction: Forward Position #: 16 Overlap #: 14 Alignment: CAMAKGGVAGSMMWGRRKCRGCMKAGATTGSMGSK ---------------TGGCCTGTTAGGAA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 3 Combined Motif Original Motif Reverse Complement CAMAKGGVAGSMMWGTGGCCKGYTAGRAWGSMGSK TCKMGCCACTGCACTCCAGC CAMAKGGVAGSMMWGTVKCBYSAYWGVAMKCCRGY Direction: Forward Position #: 16 Overlap #: 20 Alignment: CAMAKGGVAGSMMWGTGGCCKGYTAGRAWGSMGSK ---------------TCKMGCCACTGCACTCCAGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 167 Combined Motif Original Motif Original Motif CAMAKGGVAGSMMWGTVKCBYSAYWGVAMKCCRGY CCGCTCCTGTGC CAMAKGGVAGSMMWGYCGCTCCWGTGCAMKCCRGY Direction: Forward Position #: 16 Overlap #: 12 Alignment: CAMAKGGVAGSMMWGTVKCBYSAYWGVAMKCCRGY ---------------CCGCTCCTGTGC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 2 Combined Motif Reverse Complement Reverse Complement KCKGGRRTGCACWGGAGCGKCWRYSCTVCCRTRTG GCCACCAMGCCMKGCTAAT KCKGGRRTGCACWGGRSCRSCWVKCCHBSCDWRTG Direction: Forward Position #: 16 Overlap #: 19 Alignment: KCKGGRRTGCACWGGAGCGKCWRYSCTVCCRTRTG ---------------GCCACCAMGCCMKGCTAAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 170 Combined Motif Reverse Complement Original Motif CAKWHGSBDGGYBWGSKGSMCCWGTGCAMKCCRGY AATCAACCCTGGYRATCAAT CAKWHGSBDGGYBWGRWKCAMCYCTGSHVWYCART Direction: Forward Position #: 16 Overlap #: 20 Alignment: CAKWHGSBDGGYBWGSKGSMCCWGTGCAMKCCRGY ---------------AATCAACCCTGGYRATCAAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 189 Combined Motif Reverse Complement Reverse Complement AMTGMWVHSCAGKGYTGRWKCWVKCCHBSCDWRTG CAATGATAGACTGGAT AMTGMWVHSCAGKGYYRATGMTAGMCTGGMTWRTG Direction: Forward Position #: 16 Overlap #: 16 Alignment: AMTGMWVHSCAGKGYTGRWKCWVKCCHBSCDWRTG ---------------CAATGATAGACTGGAT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 242 Combined Motif Original Motif Reverse Complement AMTGMWVHSCAGKGYYRATGMTAGMCTGGMTWRTG CMCAGTTCACAATAGGGTT AMTGMWVHSCAGKGYCMMWGHTMRCMWKRVKDWTG Direction: Forward Position #: 16 Overlap #: 19 Alignment: AMTGMWVHSCAGKGYYRATGMTAGMCTGGMTWRTG ---------------CMCAGTTCACAATAGGGTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 36 Combined Motif Original Motif Reverse Complement AMTGMWVHSCAGKGYCMMWGHTMRCMWKRVKDWTG CGCCCATCGTCTGGGATGT AMTGMWVHSCAGKGYCGCMSATCGYCTGGGRKKTG Direction: Forward Position #: 16 Overlap #: 19 Alignment: AMTGMWVHSCAGKGYCMMWGHTMRCMWKRVKDWTG ---------------CGCCCATCGTCTGGGATGT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 310 Combined Motif Original Motif Reverse Complement AMTGMWVHSCAGKGYCGCMSATCGYCTGGGRKKTG GGATTTMKGACTTGCATGGG AMTGMWVHSCAGKGYSGMTTWYBGACTKGSATGKG Direction: Forward Position #: 16 Overlap #: 20 Alignment: AMTGMWVHSCAGKGYCGCMSATCGYCTGGGRKKTG ---------------GGATTTMKGACTTGCATGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 333 Combined Motif Original Motif Reverse Complement AMTGMWVHSCAGKGYSGMTTWYBGACTKGSATGKG AAAGCTGGAGCTATTATCTA AMTGMWVHSCAGKGYVRMKYTGGRRCTWKYATSTR Direction: Forward Position #: 16 Overlap #: 20 Alignment: AMTGMWVHSCAGKGYSGMTTWYBGACTKGSATGKG ---------------AAAGCTGGAGCTATTATCTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 217 Combined Motif Reverse Complement Reverse Complement KASATMRWAGMKCCAKYYKBMCYCTGSHVWYCART KGAGAACAGTAGGG KASATMRWAGMKCCAKGWKAACHSTRGGGWYCART Direction: Forward Position #: 16 Overlap #: 14 Alignment: KASATMRWAGMKCCAKYYKBMCYCTGSHVWYCART ---------------KGAGAACAGTAGGG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 147 Combined Motif Reverse Complement Reverse Complement AMTGMWCCCKASHGTTYWCYTGGRRCTWKYATSTR TCAATGGTGCCCAG AMTGMWCCCKASHGTTCAMTKGKGCCYAGYATSTR Direction: Forward Position #: 16 Overlap #: 14 Alignment: AMTGMWCCCKASHGTTYWCYTGGRRCTWKYATSTR ---------------TCAATGGTGCCCAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 280 Combined Motif Original Motif Original Motif AMTGMWCCCKASHGTTCAMTKGKGCCYAGYATSTR CCTAGATTTCAGARGATGT AMTGMWCCCKASHGTYCWAKAKTKCMBAGGATGTR Direction: Forward Position #: 16 Overlap #: 19 Alignment: AMTGMWCCCKASHGTTCAMTKGKGCCYAGYATSTR ---------------CCTAGATTTCAGARGATGT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 235 Combined Motif Original Motif Original Motif AMTGMWCCCKASHGTYCWAKAKTKCMBAGGATGTR TCCAAATGGGAGAAATTGGC AMTGMWCCCKASHGTTCYADATKGSAGARRWTGKV Direction: Forward Position #: 16 Overlap #: 20 Alignment: AMTGMWCCCKASHGTYCWAKAKTKCMBAGGATGTR ---------------TCCAAATGGGAGAAATTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 102 Combined Motif Reverse Complement Reverse Complement VYCAWKKTCTSCYATDTKGAACHSTRGGGWYCART GTTGTGAGGATTAAATGAG VYCAWKKTCTSCYATKTKGWRMDGWDKRRATSAGT Direction: Forward Position #: 16 Overlap #: 19 Alignment: VYCAWKKTCTSCYATDTKGAACHSTRGGGWYCART ---------------GTTGTGAGGATTAAATGAG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 140 Combined Motif Reverse Complement Reverse Complement ACTSATKKRDWCHYMWCRAYATKGSAGARRWTGKV GACTTCATGGAG ACTSATKKRDWCHYMGMMWTMWTGGAGARRWTGKV Direction: Forward Position #: 16 Overlap #: 12 Alignment: ACTSATKKRDWCHYMWCRAYATKGSAGARRWTGKV ---------------GACTTCATGGAG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 232 Combined Motif Reverse Complement Reverse Complement VYCAWKKTCTCCAWRAWRYCRMDGWDKRRATSAGT AAGTCTCCCAATTACAACT VYCAWKKTCTCCAWRAAGTCTCCSAATTAMWAMKT Direction: Forward Position #: 16 Overlap #: 19 Alignment: VYCAWKKTCTCCAWRAWRYCRMDGWDKRRATSAGT ---------------AAGTCTCCCAATTACAACT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 74 Combined Motif Reverse Complement Original Motif ARRTWRTAATTSGGAGACTTMWTGGAGARRWTGKV CACTTCCTAGATGG ARRTWRTAATTSGGASACTTCHTRGAKRGRWTGKV Direction: Forward Position #: 16 Overlap #: 14 Alignment: ARRTWRTAATTSGGAGACTTMWTGGAGARRWTGKV ---------------CACTTCCTAGATGG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 229 Combined Motif Original Motif Original Motif ARRTWRTAATTSGGASACTTCHTRGAKRGRWTGKV GCCTTGCTGCCGC ARRTWRTAATTSGGAGMCTTSCTGSMGCGRWTGKV Direction: Forward Position #: 16 Overlap #: 13 Alignment: ARRTWRTAATTSGGASACTTCHTRGAKRGRWTGKV ---------------GCCTTGCTGCCGC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 169 Combined Motif Reverse Complement Original Motif VYCAWKCGCRSCAGSAAGRCTCCSAATTAMWAMKT CCCAAATCCTATAAAA VYCAWKCGCRSCAGSMMSAMAYCCWATAAAAAMKT Direction: Forward Position #: 16 Overlap #: 16 Alignment: VYCAWKCGCRSCAGSAAGRCTCCSAATTAMWAMKT ---------------CCCAAATCCTATAAAA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 45 Combined Motif Reverse Complement Original Motif ARRTTTTTATWGGMTYTSRRSCTGSMGCGRWTGKV TGCCCAGTCTGGAAAGTG ARRTTTTTATWGGMTTKCVSASTSYGGAAAGTGKV Direction: Forward Position #: 16 Overlap #: 18 Alignment: ARRTTTTTATWGGMTYTSRRSCTGSMGCGRWTGKV ---------------TGCCCAGTCTGGAAAGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 84 Combined Motif Original Motif Original Motif ARRTTTTTATWGGMTTKCVSASTSYGGAAAGTGKV CTGGGTCCCCCAGCAGTGCC ARRTTTTTATWGGMTYKSGGWCYCCCRRMAGTGSC Direction: Forward Position #: 16 Overlap #: 20 Alignment: ARRTTTTTATWGGMTTKCVSASTSYGGAAAGTGKV ---------------CTGGGTCCCCCAGCAGTGCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 136 Combined Motif Original Motif Original Motif ARRTTTTTATWGGMTYKSGGWCYCCCRRMAGTGSC CCCTCACTGCCCGGGG ARRTTTTTATWGGMTCYCKSACTSCCVGGRGTGSC Direction: Forward Position #: 16 Overlap #: 16 Alignment: ARRTTTTTATWGGMTYKSGGWCYCCCRRMAGTGSC ---------------CCCTCACTGCCCGGGG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 287 Combined Motif Reverse Complement Reverse Complement GSCACMCCVGGSAGTSRGKGAYCCWATAAAAAMKT CAMTTAGCATAATG GSCACMCCVGGSAGTSASTKABCMTAWTRAAAMKT Direction: Forward Position #: 16 Overlap #: 14 Alignment: GSCACMCCVGGSAGTSRGKGAYCCWATAAAAAMKT ---------------CAMTTAGCATAATG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 262 Combined Motif Reverse Complement Reverse Complement ARRTTTKAWTAYGBTRASTSACTSCCVGGRGTGSC GACAGGAGATTAACACTGAG ARRTTTKAWTAYGBTGACWGRMKRYYARSASTGMS Direction: Forward Position #: 16 Overlap #: 20 Alignment: ARRTTTKAWTAYGBTRASTSACTSCCVGGRGTGSC ---------------GACAGGAGATTAACACTGAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 350 Combined Motif Original Motif Reverse Complement ARRTTTKAWTAYGBTGACWGRMKRYYARSASTGMS TGCTGGAGGTCCACTCCAGA ARRTTTKAWTAYGBTKRCTGGAGGTCMACWCYRGR Direction: Forward Position #: 16 Overlap #: 20 Alignment: ARRTTTKAWTAYGBTGACWGRMKRYYARSASTGMS ---------------TGCTGGAGGTCCACTCCAGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 353 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 353 Motif 225 Reverse Complement Reverse Complement GCTTCCATGTG AAGTTCTKGGKTACATGTGC CGSTTMCATGTGAAGTTCTK Direction: Backward Position #: 2 Overlap #: 11 Alignment: --------GCTTCCATGTG- AAGTTCTKGGKTACATGTGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 104 Combined Motif Reverse Complement Reverse Complement YAGAACTTCACATGYAASCG CTCCAGKTMCATCCATGTTG YAGAACTTCWCMWGYWACMKCCATGTTG Direction: Forward Position #: 9 Overlap #: 12 Alignment: YAGAACTTCACATGYAASCG-------- --------CTCCAGKTMCATCCATGTTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 235 Combined Motif Reverse Complement Original Motif CAACATGGYYGTWMCWYGWGAAGTTCTK TCCAAATGGGAGAAATTGGC CAACATGGYYGTTCCAWRTGRRRKWMWTTGGC Direction: Forward Position #: 13 Overlap #: 16 Alignment: CAACATGGYYGTWMCWYGWGAAGTTCTK---- ------------TCCAAATGGGAGAAATTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 310 Combined Motif Original Motif Original Motif CAACATGGYYGTTCCAWRTGRRRKWMWTTGGC CCCATGCAAGTCYRAAATCC CAACATGGYYGTTCCMCATGVAAGTCHKWRRYCC Direction: Forward Position #: 15 Overlap #: 18 Alignment: CAACATGGYYGTTCCAWRTGRRRKWMWTTGGC-- --------------CCCATGCAAGTCYRAAATCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 326 Combined Motif Original Motif Original Motif CAACATGGYYGTTCCMCATGVAAGTCHKWRRYCC GACATGGAGTCAAAGG CAACATGGYYGTTCCVAMWKGRAGTCAAAGRYCC Direction: Forward Position #: 16 Overlap #: 16 Alignment: CAACATGGYYGTTCCMCATGVAAGTCHKWRRYCC ---------------GACATGGAGTCAAAGG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 331 Combined Motif Reverse Complement Original Motif GGKMCTTTGACTMCRWRTVGGAACMKCCATGTTG CCACCACAGCTCAAGGAGGC GGKMCTTTGACTMCRYCWCSRMASCTCMAKGWKGC Direction: Forward Position #: 16 Overlap #: 19 Alignment: GGKMCTTTGACTMCRWRTVGGAACMKCCATGTTG- ---------------CCACCACAGCTCAAGGAGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 144 Combined Motif Original Motif Original Motif GGKMCTTTGACTMCRYCWCSRMASCTCMAKGWKGC CCGCTGCACTGTGGGAGCCC GGKMCTTTGACTMCRCCRCTGCACYKYRRGRDSSC Direction: Forward Position #: 16 Overlap #: 20 Alignment: GGKMCTTTGACTMCRYCWCSRMASCTCMAKGWKGC ---------------CCGCTGCACTGTGGGAGCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 205 Combined Motif Reverse Complement Original Motif GSSHKCMMMYMGTGCAGMGGKGRAGTCAAAGRYCC CATCTGGCAGCCCA GSSHKCMMMYMGTGCMRTSKGGSAGYCMAAGRYCC Direction: Forward Position #: 16 Overlap #: 14 Alignment: GSSHKCMMMYMGTGCAGMGGKGRAGTCAAAGRYCC ---------------CATCTGGCAGCCCA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 284 Combined Motif Original Motif Original Motif GSSHKCMMMYMGTGCMRTSKGGSAGYCMAAGRYCC CATTTGGGAGCCCATTGA GSSHKCMMMYMGTGCCATBTGGSAGCCCAWKGHCC Direction: Forward Position #: 16 Overlap #: 18 Alignment: GSSHKCMMMYMGTGCMRTSKGGSAGYCMAAGRYCC ---------------CATTTGGGAGCCCATTGA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 25 Combined Motif Reverse Complement Original Motif GGHCRWTGGGCTSCCAVATGGCACYKYRRGRDSSC CATTTCCAWCTGAGGTAC GGHCRWTGGGCTSCCMAWTKSCAHCTBAGGWACSC Direction: Forward Position #: 16 Overlap #: 18 Alignment: GGHCRWTGGGCTSCCAVATGGCACYKYRRGRDSSC ---------------CATTTCCAWCTGAGGTAC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 206 Combined Motif Reverse Complement Reverse Complement GSGTWCCTBAGDTGSRAWTRGGSAGCCCAWKGHCC GGRCKCACWGGAGC GSGTWCCTBAGDTGSGRAYDSRCAGSMSMWKGHCC Direction: Forward Position #: 16 Overlap #: 14 Alignment: GSGTWCCTBAGDTGSRAWTRGGSAGCCCAWKGHCC ---------------GGRCKCACWGGAGC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 202 Combined Motif Original Motif Original Motif GSGTWCCTBAGDTGSGRAYDSRCAGSMSMWKGHCC ACACATCACAAAGCAGTTTC GSGTWCCTBAGDTGSRVACAYCMMRVAGCAGKTYC Direction: Forward Position #: 16 Overlap #: 20 Alignment: GSGTWCCTBAGDTGSGRAYDSRCAGSMSMWKGHCC ---------------ACACATCACAAAGCAGTTTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 94 Combined Motif Original Motif Reverse Complement GSGTWCCTBAGDTGSRVACAYCMMRVAGCAGKTYC GMTTAGCTCCCACTTA GSGTWCCTBAGDTGSRMWYAKCWCMCASYWRKTYC Direction: Forward Position #: 16 Overlap #: 16 Alignment: GSGTWCCTBAGDTGSRVACAYCMMRVAGCAGKTYC ---------------GMTTAGCTCCCACTTA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 201 Combined Motif Reverse Complement Original Motif GMARKWMSTGRGWGYTMWRMSCAHCTBAGGWACSC GTAACACTCACCGCGARGGT GMARKWMSTGRGWGYKWAACACWCMYBRSGAASGY Direction: Forward Position #: 16 Overlap #: 20 Alignment: GMARKWMSTGRGWGYTMWRMSCAHCTBAGGWACSC ---------------GTAACACTCACCGCGARGGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 199 Combined Motif Original Motif Original Motif GMARKWMSTGRGWGYKWAACACWCMYBRSGAASGY ACAGCTGGCACC GMARKWMSTGRGWGYRCARCWSDCACCRSGAASGY Direction: Forward Position #: 16 Overlap #: 12 Alignment: GMARKWMSTGRGWGYKWAACACWCMYBRSGAASGY ---------------ACAGCTGGCACC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 292 Combined Motif Original Motif Reverse Complement GMARKWMSTGRGWGYRCARCWSDCACCRSGAASGY TTGTCCCACTGGAAGGTCTT GMARKWMSTGRGWGYTTRKCYCACWSSAAGRWCKT Direction: Forward Position #: 16 Overlap #: 20 Alignment: GMARKWMSTGRGWGYRCARCWSDCACCRSGAASGY ---------------TTGTCCCACTGGAAGGTCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 139 Combined Motif Original Motif Reverse Complement GMARKWMSTGRGWGYTTRKCYCACWSSAAGRWCKT AWTKKTGGTTKCCAGKGGCT GMARKWMSTGRGWGYAWDKSTSRYTKCMAGKKSYT Direction: Forward Position #: 16 Overlap #: 20 Alignment: GMARKWMSTGRGWGYTTRKCYCACWSSAAGRWCKT ---------------AWTKKTGGTTKCCAGKGGCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 178 Combined Motif Original Motif Reverse Complement GMARKWMSTGRGWGYAWDKSTSRYTKCMAGKKSYT ATGTGGAGGTGGAAGACAGT GMARKWMSTGRGWGYATGTGKRGKTGSAAGABRGT Direction: Forward Position #: 16 Overlap #: 20 Alignment: GMARKWMSTGRGWGYAWDKSTSRYTKCMAGKKSYT ---------------ATGTGGAGGTGGAAGACAGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 98 Combined Motif Original Motif Original Motif GMARKWMSTGRGWGYATGTGKRGKTGSAAGABRGT AGTTCCGGGTGGGCGTGGG GMARKWMSTGRGWGYAKTTCCRGGTGGRMGWGGGT Direction: Forward Position #: 16 Overlap #: 19 Alignment: GMARKWMSTGRGWGYATGTGKRGKTGSAAGABRGT ---------------AGTTCCGGGTGGGCGTGGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 33 Combined Motif Original Motif Reverse Complement GMARKWMSTGRGWGYAKTTCCRGGTGGRMGWGGGT GAGACTCCGTGGGCGT GMARKWMSTGRGWGYRRGWCTCSGTGGGCGTGGGT Direction: Forward Position #: 16 Overlap #: 16 Alignment: GMARKWMSTGRGWGYAKTTCCRGGTGGRMGWGGGT ---------------GAGACTCCGTGGGCGT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 290 Combined Motif Original Motif Reverse Complement GMARKWMSTGRGWGYRRGWCTCSGTGGGCGTGGGT CTGTTTGCCTGGGTATCA GMARKWMSTGRGWGYVTGTYTSCSTGGGYRTSRGT Direction: Forward Position #: 16 Overlap #: 18 Alignment: GMARKWMSTGRGWGYRRGWCTCSGTGGGCGTGGGT ---------------CTGTTTGCCTGGGTATCA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 305 Combined Motif Original Motif Reverse Complement GMARKWMSTGRGWGYVTGTYTSCSTGGGYRTSRGT GCTCTCAATTGGTCATT GMARKWMSTGRGWGYGYKYTYAMBTGGKCATYRGT Direction: Forward Position #: 16 Overlap #: 17 Alignment: GMARKWMSTGRGWGYVTGTYTSCSTGGGYRTSRGT ---------------GCTCTCAATTGGTCATT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 132 Combined Motif Original Motif Reverse Complement GMARKWMSTGRGWGYGYKYTYAMBTGGKCATYRGT GCCGCCATCTTG GMARKWMSTGRGWGYGCYSYCATCTKGKCATYRGT Direction: Forward Position #: 16 Overlap #: 12 Alignment: GMARKWMSTGRGWGYGYKYTYAMBTGGKCATYRGT ---------------GCCGCCATCTTG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 23 Combined Motif Reverse Complement Reverse Complement ACKMATGRCRAGATGKSKGCKCWCMCASYWRKTYC ACTCCCTAGTGAGATGAACC ACKMATGRCRAGATGRCTSCSBASTSAGATGAACC Direction: Forward Position #: 16 Overlap #: 20 Alignment: ACKMATGRCRAGATGKSKGCKCWCMCASYWRKTYC ---------------ACTCCCTAGTGAGATGAACC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 323 Combined Motif Reverse Complement Original Motif GGTTCATCTSASTBSGSAGKCATCTKGKCATYRGT GCTCTCAGGTCCA GGTTCATCTSASTBSGCWSTCAKGTBSDCATYRGT Direction: Forward Position #: 16 Overlap #: 13 Alignment: GGTTCATCTSASTBSGSAGKCATCTKGKCATYRGT ---------------GCTCTCAGGTCCA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 320 Combined Motif Reverse Complement Reverse Complement ACKMATGDSBACYTGASWGCSBASTSAGATGAACC TGGGGCTCCAGATG ACKMATGDSBACYTGWGGGSCTMCAGAKRTGAACC Direction: Forward Position #: 16 Overlap #: 14 Alignment: ACKMATGDSBACYTGASWGCSBASTSAGATGAACC ---------------TGGGGCTCCAGATG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 191 Combined Motif Original Motif Original Motif ACKMATGDSBACYTGWGGGSCTMCAGAKRTGAACC AAAGTGCCGAGAKTGCAGC ACKMATGDSBACYTGARAGYSYCSAGAKTKSARCC Direction: Forward Position #: 16 Overlap #: 19 Alignment: ACKMATGDSBACYTGWGGGSCTMCAGAKRTGAACC ---------------AAAGTGCCGAGAKTGCAGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 312 Combined Motif Reverse Complement Reverse Complement GGMTSYARTCTSGKSMCTKTCAKGTBSDCATYRGT CCCMKGGCACCCTCAGTCCT GGMTSYARTCTSGKSCCYHKSRSRYCCTCAKTMST Direction: Forward Position #: 16 Overlap #: 20 Alignment: GGMTSYARTCTSGKSMCTKTCAKGTBSDCATYRGT ---------------CCCMKGGCACCCTCAGTCCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 141 Combined Motif Reverse Complement Original Motif ASRARTGAGGKKSMSRDKGGSYCSAGAKTKSARCC AAGGTCCATGTAG ASRARTGAGGKKSMSAAGGKCCMBRKAGTKSARCC Direction: Forward Position #: 16 Overlap #: 13 Alignment: ASRARTGAGGKKSMSRDKGGSYCSAGAKTKSARCC ---------------AAGGTCCATGTAG------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 211 Combined Motif Reverse Complement Original Motif GGMTSYACTYMVYGGRCCTTSRSRYCCTCAKTMST GACTTCAAGAATGAAGCCG GGMTSYACTYMVYGGGMCTTCAVGAMYKMAGYCST Direction: Forward Position #: 16 Overlap #: 19 Alignment: GGMTSYACTYMVYGGRCCTTSRSRYCCTCAKTMST ---------------GACTTCAAGAATGAAGCCG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 102 Combined Motif Original Motif Reverse Complement GGMTSYACTYMVYGGGMCTTCAVGAMYKMAGYCST GTTGTGAGGATTAAATGAG GGMTSYACTYMVYGGGHYKTSADGAHTRAAKSMGT Direction: Forward Position #: 16 Overlap #: 19 Alignment: GGMTSYACTYMVYGGGMCTTCAVGAMYKMAGYCST ---------------GTTGTGAGGATTAAATGAG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 153 Combined Motif Original Motif Original Motif GGMTSYACTYMVYGGGHYKTSADGAHTRAAKSMGT CACTAGGGAGTGCC GGMTSYACTYMVYGGSACTWGRGRRTKCMAKSMGT Direction: Forward Position #: 16 Overlap #: 14 Alignment: GGMTSYACTYMVYGGGHYKTSADGAHTRAAKSMGT ---------------CACTAGGGAGTGCC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 304 Combined Motif Reverse Complement Reverse Complement ACYSRTRGYAMKCMCWAGTSCCMBRKAGTKSARCC AGCAGYTTGGAAACACT ACYSRTRGYAMKCMCARSWGCYTGGDARYACWRCC Direction: Forward Position #: 16 Overlap #: 17 Alignment: ACYSRTRGYAMKCMCWAGTSCCMBRKAGTKSARCC ---------------AGCAGYTTGGAAACACT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 176 Combined Motif Original Motif Original Motif ACYSRTRGYAMKCMCARSWGCYTGGDARYACWRCC AGGCCCCAGTGTSTGTTGTT ACYSRTRGYAMKCMCAGGMSCYWGKGWVTRHTGYY Direction: Forward Position #: 16 Overlap #: 20 Alignment: ACYSRTRGYAMKCMCARSWGCYTGGDARYACWRCC ---------------AGGCCCCAGTGTSTGTTGTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 357 Combined Motif Reverse Complement Reverse Complement MMCADMAVWCRCWKGSRCCTGRGRRTKCMAKSMGT TAATTTTATGTGTCAACTTG MMCADMAVWCRCWKGKAMYTKKRDGTGTCAWCWKK Direction: Forward Position #: 16 Overlap #: 20 Alignment: MMCADMAVWCRCWKGSRCCTGRGRRTKCMAKSMGT ---------------TAATTTTATGTGTCAACTTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 280 Combined Motif Reverse Complement Reverse Complement RRWGWTGACACDKRRAMYTRCYWGKGWVTRHTGYY ACATCMTCTGAAATCTAGG RRWGWTGACACDKRRACWTCCTMKGAAATSTWGKY Direction: Forward Position #: 16 Overlap #: 19 Alignment: RRWGWTGACACDKRRAMYTRCYWGKGWVTRHTGYY ---------------ACATCMTCTGAAATCTAGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 254 Combined Motif Reverse Complement Original Motif MYCWASATTTCRRAGGAWGTKKRDGTGTCAWCWKK AAAATCACAAGCATTCCTAT MYCWASATTTCRRAGRAARTYAVWRKSWYWHCTWT Direction: Forward Position #: 16 Overlap #: 20 Alignment: MYCWASATTTCRRAGGAWGTKKRDGTGTCAWCWKK ---------------AAAATCACAAGCATTCCTAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 15 Combined Motif Reverse Complement Reverse Complement AWAGDWMWSYKWVTKAKTTKCTMKGAAATSTWGKY TCACKMGGGAAGCGCAAG AWAGDWMWSYKWVTKWYAYKMKGGRARMKCWAGKY Direction: Forward Position #: 16 Overlap #: 18 Alignment: AWAGDWMWSYKWVTKAKTTKCTMKGAAATSTWGKY ---------------TCACKMGGGAAGCGCAAG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 299 Combined Motif Original Motif Original Motif AWAGDWMWSYKWVTKWYAYKMKGGRARMKCWAGKY CCCTGCTAGAACCTCCAA AWAGDWMWSYKWVTKHCMTGCTRGAAVCTCMARKY Direction: Forward Position #: 16 Overlap #: 18 Alignment: AWAGDWMWSYKWVTKWYAYKMKGGRARMKCWAGKY ---------------CCCTGCTAGAACCTCCAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 48 Combined Motif Original Motif Reverse Complement AWAGDWMWSYKWVTKHCMTGCTRGAAVCTCMARKY CGTCGCTCACGCTGGGAGCT AWAGDWMWSYKWVTKCSTYGCTCRMRCYKSGAGCT Direction: Forward Position #: 16 Overlap #: 20 Alignment: AWAGDWMWSYKWVTKHCMTGCTRGAAVCTCMARKY ---------------CGTCGCTCACGCTGGGAGCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 62 Combined Motif Reverse Complement Reverse Complement AGCTCSYMGKYKGAGCKASGYAVWRKSWYWHCTWT GTAGACKGGAGCTGTTCCT AGCTCSYMGKYKGAGSTAGRCDGGAGCTBTTCYTT Direction: Forward Position #: 16 Overlap #: 19 Alignment: AGCTCSYMGKYKGAGCKASGYAVWRKSWYWHCTWT ---------------GTAGACKGGAGCTGTTCCT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 215 Combined Motif Reverse Complement Reverse Complement AAKGAABAGCTCCDGKCTASCTCRMRCYKSGAGCT GGGRSCACAGGAGCD AAKGAABAGCTCCDGKSKRSCWCAGGMBSGGAGCT Direction: Forward Position #: 16 Overlap #: 15 Alignment: AAKGAABAGCTCCDGKCTASCTCRMRCYKSGAGCT ---------------GGGRSCACAGGAGCD----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 61 Combined Motif Original Motif Original Motif AAKGAABAGCTCCDGKSKRSCWCAGGMBSGGAGCT GGATCCACTGGGTGAAGCCA AAKGAABAGCTCCDGGGAWCCACTGGRTGAARSCW Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAKGAABAGCTCCDGKSKRSCWCAGGMBSGGAGCT ---------------GGATCCACTGGGTGAAGCCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 126 Combined Motif Reverse Complement Original Motif WGSMTTCAMCCAGTGGWTCCCDGGAGCTBTTCYTT AYGCCTGTAATC WGSMTTCAMCCAGTGRHDCCYGKAAKCTBTTCYTT Direction: Forward Position #: 16 Overlap #: 12 Alignment: WGSMTTCAMCCAGTGGWTCCCDGGAGCTBTTCYTT ---------------AYGCCTGTAATC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 149 Combined Motif Reverse Complement Reverse Complement AAKGAABAGRTTRCMGGHHKCACTGGRTGAARSCW GGGTGCAGGMGGGCTGAGT AAKGAABAGRTTRCMGGGTGCASKVGGKSWGAGYW Direction: Forward Position #: 16 Overlap #: 19 Alignment: AAKGAABAGRTTRCMGGHHKCACTGGRTGAARSCW ---------------GGGTGCAGGMGGGCTGAGT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 155 Combined Motif Original Motif Reverse Complement AAKGAABAGRTTRCMGGGTGCASKVGGKSWGAGYW GCCKCCCCGTCCGGGAGGGA AAKGAABAGRTTRCMGSCKSCMCGBSSGGKARGKA Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAKGAABAGRTTRCMGGGTGCASKVGGKSWGAGYW ---------------GCCKCCCCGTCCGGGAGGGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 293 Combined Motif Reverse Complement Original Motif TYCMTYCCSSVCGRGSRGSCYGKAAKCTBTTCYTT CTGACTGGGAGACACCTCCC TYCMTYCCSSVCGRGCTGRCTGGRAGMYRYYYCYY Direction: Forward Position #: 16 Overlap #: 20 Alignment: TYCMTYCCSSVCGRGSRGSCYGKAAKCTBTTCYTT ---------------CTGACTGGGAGACACCTCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 136 Combined Motif Reverse Complement Original Motif KKGKKKKKRCTMCCAGKCAGCMCGBSSGGKARGKA CCCTCACTGCCCGGGG KKGKKKKKRCTMCCASCCTSMCYGCCCGGGRRGKA Direction: Forward Position #: 16 Overlap #: 16 Alignment: KKGKKKKKRCTMCCAGKCAGCMCGBSSGGKARGKA ---------------CCCTCACTGCCCGGGG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 137 Combined Motif Reverse Complement Original Motif TYCMMCCCGGGCMGYSAGGSTGGRAGMYRYYYCYY AGGTTTGTTACATAGGTAWA TYCMMCCCGGGCMGYRRGTTTGKKABATABBTMHH Direction: Forward Position #: 16 Overlap #: 20 Alignment: TYCMMCCCGGGCMGYSAGGSTGGRAGMYRYYYCYY ---------------AGGTTTGTTACATAGGTAWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 108 Combined Motif Original Motif Reverse Complement TYCMMCCCGGGCMGYRRGTTTGKKABATABBTMHH GCGCTCKTCGGGGAGGCTCG TYCMMCCCGGGCMGYGVGYTYGTBRGRKAGGYTCV Direction: Forward Position #: 16 Overlap #: 20 Alignment: TYCMMCCCGGGCMGYRRGTTTGKKABATABBTMHH ---------------GCGCTCKTCGGGGAGGCTCG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 114 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 114 Motif 63 Original Motif Reverse Complement CTACGTTCTC AAAMAMMKMATGTTCTCACT AAACWACGYWYKYTCTCACT Direction: Forward Position #: 4 Overlap #: 10 Alignment: ---CTACGTTCTC------- AAAMAMMKMATGTTCTCACT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 235 Combined Motif Original Motif Reverse Complement AAACWACGYWYKYTCTCACT GCCAATTTCTCCCATTTGGA AAACWACGBHCDHTYTCWCYCATTTGGA Direction: Forward Position #: 9 Overlap #: 12 Alignment: AAACWACGYWYKYTCTCACT-------- --------GCCAATTTCTCCCATTTGGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 257 Combined Motif Reverse Complement Reverse Complement TCCAAATGMGWGAKAHDGDBCGTWGTTT TGTCCATGTGTTCTC TCCAAATGMGWGWGWCHRTGYGTTSTYT Direction: Forward Position #: 13 Overlap #: 15 Alignment: TCCAAATGMGWGAKAHDGDBCGTWGTTT ------------TGTCCATGTGTTCTC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 154 Combined Motif Reverse Complement Reverse Complement AMASAACMCAKDGWCWCWCYCATTTGGA TCCTATGAGAATCTAATG AMASAACMCAKDKHCTMTSASAWTYKRATG Direction: Forward Position #: 13 Overlap #: 16 Alignment: AMASAACMCAKDGWCWCWCYCATTTGGA-- ------------TCCTATGAGAATCTAATG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 245 Combined Motif Reverse Complement Reverse Complement CATKRKAWTSTSARAGDRHRTGYGTTSTYT TTGAGGAGGCAGTCTG CATKRKAWTSTSAKWGAGGAGGCRKTCTBT Direction: Forward Position #: 14 Overlap #: 16 Alignment: CATKRKAWTSTSARAGDRHRTGYGTTSTYT -------------TTGAGGAGGCAGTCTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 120 Combined Motif Original Motif Reverse Complement CATKRKAWTSTSAKWGAGGAGGCRKTCTBT GGGASCACATGG CATKRKAWTSTSAGKGAGSASRYGGTCTBT Direction: Forward Position #: 14 Overlap #: 12 Alignment: CATKRKAWTSTSAKWGAGGAGGCRKTCTBT -------------GGGASCACATGG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 365 Combined Motif Original Motif Reverse Complement CATKRKAWTSTSAGKGAGSASRYGGTCTBT GTAGACCGGAGCT CATKRKAWTSTSAGTRRRCMGGWGSTCTBT Direction: Forward Position #: 14 Overlap #: 13 Alignment: CATKRKAWTSTSAGKGAGSASRYGGTCTBT -------------GTAGACCGGAGCT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 191 Combined Motif Original Motif Reverse Complement CATKRKAWTSTSAGTRRRCMGGWGSTCTBT GCTGCARTCTCGGCACTTT CATKRKAWTSTSAGYTGMMAKSTSSKCWCTTT Direction: Forward Position #: 14 Overlap #: 17 Alignment: CATKRKAWTSTSAGTRRRCMGGWGSTCTBT-- -------------GCTGCARTCTCGGCACTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 86 Combined Motif Original Motif Reverse Complement CATKRKAWTSTSAGYTGMMAKSTSSKCWCTTT VMATTTAKTGAGCACCTACT CATKRKAWTSTSAGHHRHHDDBTGRGCACYTWCT Direction: Forward Position #: 15 Overlap #: 18 Alignment: CATKRKAWTSTSAGYTGMMAKSTSSKCWCTTT-- --------------VMATTTAKTGAGCACCTACT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 133 Combined Motif Reverse Complement Original Motif AGWAMGTGCKCABDDHHKHDCTSASAWTYKRATG CTGYGTCCCCA AGWAMGTGCKCABDDCHGHGYYCCCAWTYKRATG Direction: Forward Position #: 16 Overlap #: 11 Alignment: AGWAMGTGCKCABDDHHKHDCTSASAWTYKRATG ---------------CTGYGTCCCCA-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 177 Combined Motif Reverse Complement Reverse Complement CATKRKAWTGGGKMCHCHGDDBTGRGCACYTWCT ACCGAGMKMGCAGCTTCGGG CATKRKAWTGGGKMCACMGAGVKVDSMRCTTHSKG Direction: Forward Position #: 16 Overlap #: 19 Alignment: CATKRKAWTGGGKMCHCHGDDBTGRGCACYTWCT- ---------------ACCGAGMKMGCAGCTTCGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 26 Combined Motif Reverse Complement Reverse Complement CYSDAAGMYSHVRVCTCRGTGYYCCCAWTYKRATG TMGGGAGGCTGAGGCAGGAG CYSDAAGMYSHVRVCTMGGKRBBCTSADKCDGRWG Direction: Forward Position #: 16 Overlap #: 20 Alignment: CYSDAAGMYSHVRVCTCRGTGYYCCCAWTYKRATG ---------------TMGGGAGGCTGAGGCAGGAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 85 Combined Motif Original Motif Reverse Complement CYSDAAGMYSHVRVCTMGGKRBBCTSADKCDGRWG TGGAGAACCTTTATGTCTAG CYSDAAGMYSHVRVCTSGRGAVVCTKWATBTSTAG Direction: Forward Position #: 16 Overlap #: 20 Alignment: CYSDAAGMYSHVRVCTMGGKRBBCTSADKCDGRWG ---------------TGGAGAACCTTTATGTCTAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 121 Combined Motif Original Motif Reverse Complement CYSDAAGMYSHVRVCTSGRGAVVCTKWATBTSTAG TGGAGGTTSTAG CYSDAAGMYSHVRVCTGGAGRTTCTWGATBTSTAG Direction: Forward Position #: 16 Overlap #: 12 Alignment: CYSDAAGMYSHVRVCTSGRGAVVCTKWATBTSTAG ---------------TGGAGGTTSTAG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 47 Combined Motif Original Motif Reverse Complement CYSDAAGMYSHVRVCTGGAGRTTCTWGATBTSTAG MGGAAACTGAGGC CYSDAAGMYSHVRVCWGGARAYTSWGGMTBTSTAG Direction: Forward Position #: 16 Overlap #: 13 Alignment: CYSDAAGMYSHVRVCTGGAGRTTCTWGATBTSTAG ---------------MGGAAACTGAGGC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 38 Combined Motif Reverse Complement Reverse Complement CTASABARCCWSAKTKTCCWGVKVDSMRCTTHSKG TCTMKGCTCACTGC CTASABARCCWSAKTTYYCDGCTCACHGCTTHSKG Direction: Forward Position #: 16 Overlap #: 14 Alignment: CTASABARCCWSAKTKTCCWGVKVDSMRCTTHSKG ---------------TCTMKGCTCACTGC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 211 Combined Motif Original Motif Original Motif CTASABARCCWSAKTTYYCDGCTCACHGCTTHSKG GACTTCAAGAATGAAGCCG CTASABARCCWSAKTKHCYTSMWSAMTGMWKCCGG Direction: Forward Position #: 16 Overlap #: 19 Alignment: CTASABARCCWSAKTTYYCDGCTCACHGCTTHSKG ---------------GACTTCAAGAATGAAGCCG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 217 Combined Motif Reverse Complement Reverse Complement CCGGYWYCAYTSWYSAMGHYAYTSWGGMTBTSTAG KGAGAACAGTAGGG CCGGYWYCAYTSWYSDVRKMACWGTAGGKBTSTAG Direction: Forward Position #: 16 Overlap #: 14 Alignment: CCGGYWYCAYTSWYSAMGHYAYTSWGGMTBTSTAG ---------------KGAGAACAGTAGGG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 62 Combined Motif Reverse Complement Reverse Complement CTASABYCCTACWGTYYKVDSMWSAMTGMWKCCGG GTAGACKGGAGCTGTTCCT CTASABYCCTACWGTBTAGACDGGAGYKVTTCCTG Direction: Forward Position #: 16 Overlap #: 19 Alignment: CTASABYCCTACWGTYYKVDSMWSAMTGMWKCCGG ---------------GTAGACKGGAGCTGTTCCT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 164 Combined Motif Original Motif Reverse Complement CTASABYCCTACWGTBTAGACDGGAGYKVTTCCTG GCGMGCGGGAACCGGGGCT CTASABYCCTACWGTGYRVRCGGGAACBGKKSCTG Direction: Forward Position #: 16 Overlap #: 19 Alignment: CTASABYCCTACWGTBTAGACDGGAGYKVTTCCTG ---------------GCGMGCGGGAACCGGGGCT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 264 Combined Motif Original Motif Original Motif CTASABYCCTACWGTGYRVRCGGGAACBGKKSCTG CCAAGGTCACA CTASABYCCTACWGTSCAAGSTSRMACBGKKSCTG Direction: Forward Position #: 16 Overlap #: 11 Alignment: CTASABYCCTACWGTGYRVRCGGGAACBGKKSCTG ---------------CCAAGGTCACA--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 329 Combined Motif Original Motif Original Motif CTASABYCCTACWGTSCAAGSTSRMACBGKKSCTG GGGAGGGATATATTAGC CTASABYCCTACWGTGSGAGGGADAWMTTAGCCTG Direction: Forward Position #: 16 Overlap #: 17 Alignment: CTASABYCCTACWGTSCAAGSTSRMACBGKKSCTG ---------------GGGAGGGATATATTAGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 91 Combined Motif Reverse Complement Reverse Complement CAGGCTAAYWTDTCCCTCSCACWGTAGGKBTSTAG TTGAGACMGKGTCT CAGGCTAAYWTDTCCYTSASACHGTRKCTBTSTAG Direction: Forward Position #: 16 Overlap #: 14 Alignment: CAGGCTAAYWTDTCCCTCSCACWGTAGGKBTSTAG ---------------TTGAGACMGKGTCT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 294 Combined Motif Reverse Complement Original Motif CTASABAGRMACHGTSTSAMGGADAWMTTAGCCTG AGCTGTGAGAAGAGGGCCAC CTASABAGRMACHGTMGCWVKGAGAARWKRGCCWS Direction: Forward Position #: 16 Overlap #: 20 Alignment: CTASABAGRMACHGTSTSAMGGADAWMTTAGCCTG ---------------AGCTGTGAGAAGAGGGCCAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 84 Combined Motif Original Motif Reverse Complement CTASABAGRMACHGTMGCWVKGAGAARWKRGCCWS GGCACTGCTGGGGGACCCAG CTASABAGRMACHGTRGCACTGMTRRGGGASCCAG Direction: Forward Position #: 16 Overlap #: 20 Alignment: CTASABAGRMACHGTMGCWVKGAGAARWKRGCCWS ---------------GGCACTGCTGGGGGACCCAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 19 Combined Motif Original Motif Original Motif CTASABAGRMACHGTRGCACTGMTRRGGGASCCAG CACCAGGAGATTATATCCCR CTASABAGRMACHGTCRCMMKGAGADKAKATCCMG Direction: Forward Position #: 16 Overlap #: 20 Alignment: CTASABAGRMACHGTRGCACTGMTRRGGGASCCAG ---------------CACCAGGAGATTATATCCCR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 271 Combined Motif Reverse Complement Original Motif CRGGATRTRDTCTCYYRGKGACHGTRKCTBTSTAG AGGGATCTAGGTTGCR CRGGATRTRDTCTCYWGGGRWCTRGGTYKCDSTAG Direction: Forward Position #: 16 Overlap #: 16 Alignment: CRGGATRTRDTCTCYYRGKGACHGTRKCTBTSTAG ---------------AGGGATCTAGGTTGCR---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 333 Combined Motif Original Motif Original Motif CRGGATRTRDTCTCYWGGGRWCTRGGTYKCDSTAG TAGATAATAGCTCCAGCTTT CRGGATRTRDTCTCYTRGRWAMTAGSTCSMGCTWK Direction: Forward Position #: 16 Overlap #: 20 Alignment: CRGGATRTRDTCTCYWGGGRWCTRGGTYKCDSTAG ---------------TAGATAATAGCTCCAGCTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 284 Combined Motif Original Motif Original Motif CRGGATRTRDTCTCYTRGRWAMTAGSTCSMGCTWK CATTTGGGAGCCCATTGA CRGGATRTRDTCTCYYAKDTRVKAGCYCVTTSWWK Direction: Forward Position #: 16 Overlap #: 18 Alignment: CRGGATRTRDTCTCYTRGRWAMTAGSTCSMGCTWK ---------------CATTTGGGAGCCCATTGA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 309 Combined Motif Original Motif Original Motif CRGGATRTRDTCTCYYAKDTRVKAGCYCVTTSWWK CATTCTGGGGTCTGGAGGAY CRGGATRTRDTCTCYCATTYTGGRGYCYGKWGRWT Direction: Forward Position #: 16 Overlap #: 20 Alignment: CRGGATRTRDTCTCYYAKDTRVKAGCYCVTTSWWK ---------------CATTCTGGGGTCTGGAGGAY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 243 Combined Motif Reverse Complement Original Motif AWMCWYCMGMCMCCAKAATGKGAGADKAKATCCMG CAGTGGTTCTCAA AWMCWYCMGMCMCCABARTGGKWSWCWAKATCCMG Direction: Forward Position #: 16 Overlap #: 13 Alignment: AWMCWYCMGMCMCCAKAATGKGAGADKAKATCCMG ---------------CAGTGGTTCTCAA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 291 Combined Motif Original Motif Original Motif AWMCWYCMGMCMCCABARTGGKWSWCWAKATCCMG CTGAGGACCTGAGGTCRTA AWMCWYCMGMCMCCACWGWGGDCCTSARGWYSYAG Direction: Forward Position #: 16 Overlap #: 19 Alignment: AWMCWYCMGMCMCCABARTGGKWSWCWAKATCCMG ---------------CTGAGGACCTGAGGTCRTA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 131 Combined Motif Original Motif Original Motif AWMCWYCMGMCMCCACWGWGGDCCTSARGWYSYAG CCTGGGTTCAA AWMCWYCMGMCMCCACYKDGGTTCWRARGWYSYAG Direction: Forward Position #: 16 Overlap #: 11 Alignment: AWMCWYCMGMCMCCACWGWGGDCCTSARGWYSYAG ---------------CCTGGGTTCAA--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 242 Combined Motif Reverse Complement Reverse Complement CTKSKWCMTKWGAACCHRKGTGGRGYCYGKWGRWT CMCAGTTCACAATAGGGTT CTKSKWCMTKWGAACCMVAGTKSASWMTAGRGTTT Direction: Forward Position #: 16 Overlap #: 19 Alignment: CTKSKWCMTKWGAACCHRKGTGGRGYCYGKWGRWT ---------------CMCAGTTCACAATAGGGTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 202 Combined Motif Original Motif Reverse Complement CTKSKWCMTKWGAACCMVAGTKSASWMTAGRGTTT GAAACTGCTTTGTGATGTGT CTKSKWCMTKWGAACSAAASTGCWBTVTRRTGTKT Direction: Forward Position #: 16 Overlap #: 20 Alignment: CTKSKWCMTKWGAACCMVAGTKSASWMTAGRGTTT ---------------GAAACTGCTTTGTGATGTGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 105 Combined Motif Original Motif Reverse Complement CTKSKWCMTKWGAACSAAASTGCWBTVTRRTGTKT GGAGGTGTGGAGGGAGAGGC CTKSKWCMTKWGAACGRARGTGYGGAGKGAGRKGY Direction: Forward Position #: 16 Overlap #: 20 Alignment: CTKSKWCMTKWGAACSAAASTGCWBTVTRRTGTKT ---------------GGAGGTGTGGAGGGAGAGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 178 Combined Motif Reverse Complement Original Motif KCYKCTCYCTCCMCACMTMCGTTCWRARGWYSYAG ACTGTCTTCCACCTCCACAT KCYKCTCYCTCCMCAMCTGYSTTCHAMSKHCACAK Direction: Forward Position #: 16 Overlap #: 20 Alignment: KCYKCTCYCTCCMCACMTMCGTTCWRARGWYSYAG ---------------ACTGTCTTCCACCTCCACAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 108 Combined Motif Original Motif Original Motif KCYKCTCYCTCCMCAMCTGYSTTCHAMSKHCACAK CGAGCCTCCCCGAYGAGCGC KCYKCTCYCTCCMCACSWGCCTYCCMVABVMRCRC Direction: Forward Position #: 16 Overlap #: 20 Alignment: KCYKCTCYCTCCMCAMCTGYSTTCHAMSKHCACAK ---------------CGAGCCTCCCCGAYGAGCGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 179 Combined Motif Original Motif Original Motif KCYKCTCYCTCCMCACSWGCCTYCCMVABVMRCRC AGGTCCTTCAGGAGGTATTC KCYKCTCYCTCCMCAAGDKCCTTCMGGAGGTAYDC Direction: Forward Position #: 16 Overlap #: 20 Alignment: KCYKCTCYCTCCMCACSWGCCTYCCMVABVMRCRC ---------------AGGTCCTTCAGGAGGTATTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 313 Combined Motif Original Motif Reverse Complement KCYKCTCYCTCCMCAAGDKCCTTCMGGAGGTAYDC MGCTGAGGCAGGAG KCYKCTCYCTCCMCAMGVTSMKKCAGGAGGTAYDC Direction: Forward Position #: 16 Overlap #: 14 Alignment: KCYKCTCYCTCCMCAAGDKCCTTCMGGAGGTAYDC ---------------MGCTGAGGCAGGAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 299 Combined Motif Reverse Complement Reverse Complement GDMTACCTCCTGYYYSAVCYTGYGGAGKGAGRKGY TTGGAGGTTCTAGCAGGG GDMTACCTCCTGYYYYWGSWKGTTSWRGSAGGGGY Direction: Forward Position #: 16 Overlap #: 18 Alignment: GDMTACCTCCTGYYYSAVCYTGYGGAGKGAGRKGY ---------------TTGGAGGTTCTAGCAGGG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 94 Combined Motif Original Motif Original Motif GDMTACCTCCTGYYYYWGSWKGTTSWRGSAGGGGY TAAGTGGGAGCTAARC GDMTACCTCCTGYYYTARGTGGKWGYTRAASGGGY Direction: Forward Position #: 16 Overlap #: 16 Alignment: GDMTACCTCCTGYYYYWGSWKGTTSWRGSAGGGGY ---------------TAAGTGGGAGCTAARC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 29 Combined Motif Reverse Complement Reverse Complement KCCCSTTKAKCWYCCACKTAMKKCAGGAGGTAYDC MGTCTMKCTCTGTKGCCCAG KCCCSTTKAKCWYCCASTYWMKCYMKGWKGCMCAS Direction: Forward Position #: 16 Overlap #: 20 Alignment: KCCCSTTKAKCWYCCACKTAMKKCAGGAGGTAYDC ---------------MGTCTMKCTCTGTKGCCCAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 163 Combined Motif Reverse Complement Original Motif STGRGCYWCRRMGYRWKASTGGKWGYTRAASGGGY CCTCCGTGGGCTCC STGRGCYWCRRMGYRMCWCYGKGGGCTCCASGGGY Direction: Forward Position #: 16 Overlap #: 14 Alignment: STGRGCYWCRRMGYRWKASTGGKWGYTRAASGGGY ---------------CCTCCGTGGGCTCC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 221 Combined Motif Original Motif Original Motif STGRGCYWCRRMGYRMCWCYGKGGGCTCCASGGGY GGGAGGAAGGGGACAC STGRGCYWCRRMGYRVGGMSGDRGGSKACASGGGY Direction: Forward Position #: 16 Overlap #: 16 Alignment: STGRGCYWCRRMGYRMCWCYGKGGGCTCCASGGGY ---------------GGGAGGAAGGGGACAC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 141 Combined Motif Reverse Complement Reverse Complement KCCCSTGTYSCCKDCSYCCVMKCYMKGWKGCMCAS CTACATGGACCTT KCCCSTGTYSCCKDCCTACAHGGHCCKWKGCMCAS Direction: Forward Position #: 16 Overlap #: 13 Alignment: KCCCSTGTYSCCKDCSYCCVMKCYMKGWKGCMCAS ---------------CTACATGGACCTT------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 65 Combined Motif Original Motif Original Motif KCCCSTGTYSCCKDCCTACAHGGHCCKWKGCMCAS AGAAATCGAGCRCAGCGCCG KCCCSTGTYSCCKDCMKAMATSGASCGCRGCVCMG Direction: Forward Position #: 16 Overlap #: 20 Alignment: KCCCSTGTYSCCKDCCTACAHGGHCCKWKGCMCAS ---------------AGAAATCGAGCRCAGCGCCG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 60 Combined Motif Reverse Complement Original Motif CRGVGCKGCGSTCSATYTYYGDRGGSKACASGGGY GATCACGAGGTCAGGAG CRGVGCKGCGSTCSAKATCWSRAGGTSASRMGGGY Direction: Forward Position #: 16 Overlap #: 17 Alignment: CRGVGCKGCGSTCSATYTYYGDRGGSKACASGGGY ---------------GATCACGAGGTCAGGAG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 143 Combined Motif Reverse Complement Original Motif KCCCYMSTSACCTMSWGATYTSGASCGCRGCVCMG CTGCGTCGCTCAC KCCCYMSTSACCTMSCKRYBTCGMKCACRGCVCMG Direction: Forward Position #: 16 Overlap #: 13 Alignment: KCCCYMSTSACCTMSWGATYTSGASCGCRGCVCMG ---------------CTGCGTCGCTCAC------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 327 Combined Motif Reverse Complement Original Motif CRGVGCKGTGRRCGABKMRGSRAGGTSASRMGGGY AGGAGGAAGTCAATTTC CRGVGCKGTGRRCGAAGVAGGAAGKYAABKTSGGY Direction: Forward Position #: 16 Overlap #: 17 Alignment: CRGVGCKGTGRRCGABKMRGSRAGGTSASRMGGGY ---------------AGGAGGAAGTCAATTTC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 272 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 272 Motif 334 Original Motif Original Motif CAGCTGTCAC CATCTGTCAC CAKCTGTCAC Direction: Forward Position #: 1 Overlap #: 10 Alignment: CAGCTGTCAC CATCTGTCAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 199 Reverse Complement Reverse Complement GTGACAGYTG GGTGCCAGCTGT GKKRCMRBYKGT Direction: Forward Position #: 1 Overlap #: 10 Alignment: GTGACAGYTG-- GGTGCCAGCTGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 1 Original Motif Original Motif GKKRCMRBYKGT GGGGTGACAGABGB GGGGTGDYASADGBKGT Direction: Forward Position #: 6 Overlap #: 9 Alignment: -----GKKRCMRBYKGT GGGGTGACAGABGB--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 325 Combined Motif Reverse Complement Reverse Complement ACRVCHTSTKDCACCCC TATTTACAGCTGCT ACRVCHTATTTMMMSCYGCT Direction: Forward Position #: 7 Overlap #: 11 Alignment: ACRVCHTSTKDCACCCC--- ------TATTTACAGCTGCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 49 Combined Motif Reverse Complement Reverse Complement AGCMGSYYYAAATADGBKGT GGRRMCAGATGT AGCMGSYYBRRRHMAGATGT Direction: Forward Position #: 9 Overlap #: 12 Alignment: AGCMGSYYYAAATADGBKGT --------GGRRMCAGATGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 216 Combined Motif Original Motif Reverse Complement AGCMGSYYBRRRHMAGATGT GGTGATTTCTG AGCMGSYYGGWGAYWKCTGT Direction: Forward Position #: 9 Overlap #: 11 Alignment: AGCMGSYYBRRRHMAGATGT --------GGTGATTTCTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 335 Combined Motif Reverse Complement Original Motif ACAGRWMTCWCCMMSCYGCT GTTAATGCTGA ACAGRWMTSTYMAHGCTGMT Direction: Forward Position #: 9 Overlap #: 11 Alignment: ACAGRWMTCWCCMMSCYGCT --------GTTAATGCTGA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 306 Combined Motif Original Motif Reverse Complement ACAGRWMTSTYMAHGCTGMT CAAGCGCCAGCTCATGTC ACAGRWMTCAAGMDSCWGCTCATGTC Direction: Forward Position #: 9 Overlap #: 12 Alignment: ACAGRWMTSTYMAHGCTGMT------ --------CAAGCGCCAGCTCATGTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 94 Combined Motif Reverse Complement Reverse Complement GACATGAGCWGSHYCTTGAYWKCTGT GMTTAGCTCCCACTTA GACATGAGCWGGMTBAKSWCYYAYKTA Direction: Forward Position #: 12 Overlap #: 15 Alignment: GACATGAGCWGSHYCTTGAYWKCTGT- -----------GMTTAGCTCCCACTTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 165 Combined Motif Reverse Complement Reverse Complement TAYKTKKGWSYTVARCCWGCTCATGTC AGCTCMKCCTCCTGTCAGAT TAYKTKKGWSYAGMTCCDSCTCMTGTCAGAT Direction: Forward Position #: 12 Overlap #: 16 Alignment: TAYKTKKGWSYTVARCCWGCTCATGTC---- -----------AGCTCMKCCTCCTGTCAGAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 205 Combined Motif Reverse Complement Reverse Complement ATCTGACAYGAGSDGGARCTKSWCYYAYKTA TGGGCTGCCAGATG ATCTGACAYGAGSHGGGSYKBCASATRYKTA Direction: Forward Position #: 14 Overlap #: 14 Alignment: ATCTGACAYGAGSDGGARCTKSWCYYAYKTA -------------TGGGCTGCCAGATG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 62 Combined Motif Original Motif Original Motif ATCTGACAYGAGSHGGGSYKBCASATRYKTA AGGAACAGCTCCRGTCTAC ATCTGACAYGAGSAGGAACAGCWCMDGTBTAC Direction: Forward Position #: 14 Overlap #: 18 Alignment: ATCTGACAYGAGSHGGGSYKBCASATRYKTA- -------------AGGAACAGCTCCRGTCTAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 192 Combined Motif Original Motif Original Motif ATCTGACAYGAGSAGGAACAGCWCMDGTBTAC GAATCCTGGGACAGCCTGT ATCTGACAYGAGSAGRAWCMKSKSACRKCYWST Direction: Forward Position #: 15 Overlap #: 18 Alignment: ATCTGACAYGAGSAGGAACAGCWCMDGTBTAC- --------------GAATCCTGGGACAGCCTGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 255 Combined Motif Reverse Complement Reverse Complement ASWKGYKGTSYSRRGWTKCTSCTCMTGTCAGAT TTTGTTATAGCAG ASWKGYKGTSYSRRKTTGYTAYWSCWGTCAGAT Direction: Forward Position #: 15 Overlap #: 13 Alignment: ASWKGYKGTSYSRRGWTKCTSCTCMTGTCAGAT --------------TTTGTTATAGCAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 269 Combined Motif Reverse Complement Reverse Complement ATCTGACWGSWKTAMCAARMKSKSACRKCYWST GCACATGTCGCT ATCTGACWGSWKTAVCAMATGKCGMYRKCYWST Direction: Forward Position #: 15 Overlap #: 12 Alignment: ATCTGACWGSWKTAMCAARMKSKSACRKCYWST --------------GCACATGTCGCT------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 357 Combined Motif Original Motif Original Motif ATCTGACWGSWKTAVCAMATGKCGMYRKCYWST CAAGTTGACACATAAAATTA ATCTGACWGSWKTACMAVWTGACRCHDDMHABTA Direction: Forward Position #: 15 Overlap #: 19 Alignment: ATCTGACWGSWKTAVCAMATGKCGMYRKCYWST- --------------CAAGTTGACACATAAAATTA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 35 Combined Motif Original Motif Original Motif ATCTGACWGSWKTACMAVWTGACRCHDDMHABTA CAGAAATCACCCGTCTT ATCTGACWGSWKTACCAGAWRTCACCHRTCWTTA Direction: Forward Position #: 16 Overlap #: 17 Alignment: ATCTGACWGSWKTACMAVWTGACRCHDDMHABTA ---------------CAGAAATCACCCGTCTT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 81 Combined Motif Original Motif Original Motif ATCTGACWGSWKTACCAGAWRTCACCHRTCWTTA CATCTGTAAAAT ATCTGACWGSWKTACCAKMTRTMAMMTRTCWTTA Direction: Forward Position #: 16 Overlap #: 12 Alignment: ATCTGACWGSWKTACCAGAWRTCACCHRTCWTTA ---------------CATCTGTAAAAT------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 84 Combined Motif Reverse Complement Original Motif TAAWGAMAYYTYAMARRTGGTAYWSCWGTCAGAT CTGGGTCCCCCAGCAGTGCC TAAWGAMAYYTYAMASDKGGTCCYCCAGYMRKRYC Direction: Forward Position #: 16 Overlap #: 19 Alignment: TAAWGAMAYYTYAMARRTGGTAYWSCWGTCAGAT- ---------------CTGGGTCCCCCAGCAGTGCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 348 Combined Motif Reverse Complement Reverse Complement GKMRMYKCTGGKGGACCYDSTRTMAMMTRTCWTTA CAAASCKGTCATAGGCCAT GKMRMYKCTGGKGGACMHASYGKTMATWGKCYWTA Direction: Forward Position #: 16 Overlap #: 19 Alignment: GKMRMYKCTGGKGGACCYDSTRTMAMMTRTCWTTA ---------------CAAASCKGTCATAGGCCAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 115 Combined Motif Original Motif Original Motif GKMRMYKCTGGKGGACMHASYGKTMATWGKCYWTA ATGATCCAGCAATYCCACTH GKMRMYKCTGGKGGAMWVABCBRDCAATBBCAHTA Direction: Forward Position #: 16 Overlap #: 20 Alignment: GKMRMYKCTGGKGGACMHASYGKTMATWGKCYWTA ---------------ATGATCCAGCAATYCCACTH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 166 Combined Motif Reverse Complement Reverse Complement TADTGBBATTGHKBGVTVWRTCCYCCAGYMRKRYC CTCRAATGTCCCTT TADTGBBATTGHKBGCTCAAWYSTCCHKTMRKRYC Direction: Forward Position #: 16 Overlap #: 14 Alignment: TADTGBBATTGHKBGVTVWRTCCYCCAGYMRKRYC ---------------CTCRAATGTCCCTT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 69 Combined Motif Reverse Complement Reverse Complement GKMRMYAYHGGASMWTTGAGCBRDCAATBBCAHTA TGTAKTCCCAGCTAC GKMRMYAYHGGASMWTKKAGYCVBMRMTACCAHTA Direction: Forward Position #: 16 Overlap #: 15 Alignment: GKMRMYAYHGGASMWTTGAGCBRDCAATBBCAHTA ---------------TGTAKTCCCAGCTAC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 293 Combined Motif Original Motif Original Motif GKMRMYAYHGGASMWTKKAGYCVBMRMTACCAHTA CTGACTGGGAGACACCTCCC GKMRMYAYHGGASMWYTDACTSGGAGAYACCWCYM Direction: Forward Position #: 16 Overlap #: 20 Alignment: GKMRMYAYHGGASMWTKKAGYCVBMRMTACCAHTA ---------------CTGACTGGGAGACACCTCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 225 Combined Motif Original Motif Original Motif GKMRMYAYHGGASMWYTDACTSGGAGAYACCWCYM GCACATGTAYCCYAGAACTT GKMRMYAYHGGASMWSYAMMTGKRMSCYASMACTY Direction: Forward Position #: 16 Overlap #: 20 Alignment: GKMRMYAYHGGASMWYTDACTSGGAGAYACCWCYM ---------------GCACATGTAYCCYAGAACTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 261 Combined Motif Reverse Complement Reverse Complement MAGTYSTKGSYKRCAYRTKSWYSTCCHKTMRKRYC TAGTGGTGATTTSTGAGAT MAGTYSTKGSYKRCATAGTGDTGWYYTGTVAGATC Direction: Forward Position #: 16 Overlap #: 19 Alignment: MAGTYSTKGSYKRCAYRTKSWYSTCCHKTMRKRYC ---------------TAGTGGTGATTTSTGAGAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 263 Combined Motif Reverse Complement Original Motif GATCTVACAMKWCAHCACTATGKRMSCYASMACTY CCCAGCTCTGCC GATCTVACAMKWCAHCMCWRYBYDVCCYASMACTY Direction: Forward Position #: 16 Overlap #: 12 Alignment: GATCTVACAMKWCAHCACTATGKRMSCYASMACTY ---------------CCCAGCTCTGCC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 240 Combined Motif Reverse Complement Original Motif MAGTYSTKGGVDKBKMWGRGDTGWYYTGTVAGATC ATGTGCWGTCCC MAGTYSTKGGVDKBKATGKGCTGTCCYGTVAGATC Direction: Forward Position #: 16 Overlap #: 12 Alignment: MAGTYSTKGGVDKBKMWGRGDTGWYYTGTVAGATC ---------------ATGTGCWGTCCC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 321 Combined Motif Original Motif Original Motif MAGTYSTKGGVDKBKATGKGCTGTCCYGTVAGATC AAGCTCGAACTGGGTGGAGC MAGTYSTKGGVDKBKAWGYKCDRACYBGKBRGAKC Direction: Forward Position #: 16 Overlap #: 20 Alignment: MAGTYSTKGGVDKBKATGKGCTGTCCYGTVAGATC ---------------AAGCTCGAACTGGGTGGAGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 17 Combined Motif Reverse Complement Reverse Complement GYTCMVYCBMGTKHGRKCWTYBYDVCCYASMACTY TGHCCTGCKCCCACTGTCT GYTCMVYCBMGTKHGWGCHYTGCKCCCAMTVWCTY Direction: Forward Position #: 16 Overlap #: 19 Alignment: GYTCMVYCBMGTKHGRKCWTYBYDVCCYASMACTY ---------------TGHCCTGCKCCCACTGTCT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 266 Combined Motif Original Motif Reverse Complement GYTCMVYCBMGTKHGWGCHYTGCKCCCAMTVWCTY TGCTGCTGCTGC GYTCMVYCBMGTKHGTGCTSYKSCYSCAMTVWCTY Direction: Forward Position #: 16 Overlap #: 12 Alignment: GYTCMVYCBMGTKHGWGCHYTGCKCCCAMTVWCTY ---------------TGCTGCTGCTGC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 176 Combined Motif Reverse Complement Reverse Complement MAGWVARTGSMGSRKSAGCACDRACYBGKBRGAKC AACAACASACACTGGGGCCT MAGWVARTGSMGSRKVASMACAVACWCKGGGGMCY Direction: Forward Position #: 16 Overlap #: 20 Alignment: MAGWVARTGSMGSRKSAGCACDRACYBGKBRGAKC ---------------AACAACASACACTGGGGCCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 209 Combined Motif Original Motif Reverse Complement MAGWVARTGSMGSRKVASMACAVACWCKGGGGMCY ATGGGCTGACAG MAGWVARTGSMGSRKAWGVRCWGACASKGGGGMCY Direction: Forward Position #: 16 Overlap #: 12 Alignment: MAGWVARTGSMGSRKVASMACAVACWCKGGGGMCY ---------------ATGGGCTGACAG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 191 Combined Motif Reverse Complement Reverse Complement MGYCCCCYSTGTCWGMVCWTYKSCYSCAMTVWCTY GCTGCARTCTCGGCACTTT MGYCCCCYSTGTCWGGCYRYMDTCTSSVCWCTYTY Direction: Forward Position #: 16 Overlap #: 19 Alignment: MGYCCCCYSTGTCWGMVCWTYKSCYSCAMTVWCTY ---------------GCTGCARTCTCGGCACTTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 264 Combined Motif Reverse Complement Original Motif MAMAGWGVSSAGAHYKMMGCCWGACASKGGGGMCY CCAAGGTCACA MAMAGWGVSSAGAHYSCARGSTSACASKGGGGMCY Direction: Forward Position #: 16 Overlap #: 11 Alignment: MAMAGWGVSSAGAHYKMMGCCWGACASKGGGGMCY ---------------CCAAGGTCACA--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 112 Combined Motif Original Motif Original Motif MAMAGWGVSSAGAHYSCARGSTSACASKGGGGMCY GCTGTGTGACCTTGGGCAAG MAMAGWGVSSAGAHYGCWRBGTGACMBTGGGSAVB Direction: Forward Position #: 16 Overlap #: 20 Alignment: MAMAGWGVSSAGAHYSCARGSTSACASKGGGGMCY ---------------GCTGTGTGACCTTGGGCAAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 137 Combined Motif Reverse Complement Reverse Complement BBTSCCCAVYGTCACVMWGCMDTCTSSVCWCTYTY TWTACCTATGTAACAAACCT BBTSCCCAVYGTCACTMTRCMKWYKYMACAMWCYT Direction: Forward Position #: 16 Overlap #: 20 Alignment: BBTSCCCAVYGTCACVMWGCMDTCTSSVCWCTYTY ---------------TWTACCTATGTAACAAACCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 303 Combined Motif Reverse Complement Original Motif AKGWYTGTYMYMWRRGKAYAGTGACMBTGGGSAVB AGTTCTTAAAGATGGT AKGWYTGTYMYMWRRRGWTCKTRAMVDTGGKSAVB Direction: Forward Position #: 16 Overlap #: 16 Alignment: AKGWYTGTYMYMWRRGKAYAGTGACMBTGGGSAVB ---------------AGTTCTTAAAGATGGT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 148 Combined Motif Original Motif Reverse Complement AKGWYTGTYMYMWRRRGWTCKTRAMVDTGGKSAVB CTTCGCTGACTCTCTTT AKGWYTGTYMYMWRRCKTYVCTGACTCTSKTTAVB Direction: Forward Position #: 16 Overlap #: 17 Alignment: AKGWYTGTYMYMWRRRGWTCKTRAMVDTGGKSAVB ---------------CTTCGCTGACTCTCTTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 101 Combined Motif Original Motif Original Motif AKGWYTGTYMYMWRRCKTYVCTGACTCTSKTTAVB CGCCGCCGCCGC AKGWYTGTYMYMWRRCGYCGCYGMCKCTSKTTAVB Direction: Forward Position #: 16 Overlap #: 12 Alignment: AKGWYTGTYMYMWRRCKTYVCTGACTCTSKTTAVB ---------------CGCCGCCGCCGC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 76 Combined Motif Reverse Complement Reverse Complement BBTAARSAGYGRCMGCGKCGMKWYKYMACAMWCYT CMTAGYACAGTGCCTGGCAC BBTAARSAGYGRCMGCVKMGCWHHKTRMCWRDCHY Direction: Forward Position #: 16 Overlap #: 20 Alignment: BBTAARSAGYGRCMGCGKCGMKWYKYMACAMWCYT ---------------CMTAGYACAGTGCCTGGCAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 227 Combined Motif Original Motif Original Motif BBTAARSAGYGRCMGCVKMGCWHHKTRMCWRDCHY CCCAAATCTCATSTTGAAT BBTAARSAGYGRCMGCCYARATCTSWDCYTGAMWY Direction: Forward Position #: 16 Overlap #: 19 Alignment: BBTAARSAGYGRCMGCVKMGCWHHKTRMCWRDCHY ---------------CCCAAATCTCATSTTGAAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 242 Combined Motif Original Motif Reverse Complement BBTAARSAGYGRCMGCCYARATCTSWDCYTGAMWY CMCAGTTCACAATAGGGTT BBTAARSAGYGRCMGCMCAGWTCWCADBWKGRWTY Direction: Forward Position #: 16 Overlap #: 19 Alignment: BBTAARSAGYGRCMGCCYARATCTSWDCYTGAMWY ---------------CMCAGTTCACAATAGGGTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 63 Combined Motif Reverse Complement Reverse Complement KAWMCYWVDTGWGAWCTGRGCYGMCKCTSKTTAVB AAAMAMMKMATGTTCTCACT KAWMCYWVDTGWGAWMWRVRCCGMMTSTTYTCACT Direction: Forward Position #: 16 Overlap #: 20 Alignment: KAWMCYWVDTGWGAWCTGRGCYGMCKCTSKTTAVB ---------------AAAMAMMKMATGTTCTCACT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 299 Combined Motif Original Motif Original Motif KAWMCYWVDTGWGAWMWRVRCCGMMTSTTYTCACT CCCTGCTAGAACCTCCAA KAWMCYWVDTGWGAWMMCTGCYRSAWCYTCYMACT Direction: Forward Position #: 16 Overlap #: 18 Alignment: KAWMCYWVDTGWGAWMWRVRCCGMMTSTTYTCACT ---------------CCCTGCTAGAACCTCCAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 307 Combined Motif Reverse Complement Original Motif AGTYMGAMGWTSKMGCAGRRWTCWCADBWKGRWTY AGATGCCAGCCAGAGCTCT AGTYMGAMGWTSKMGMRATGYYMRCMAGAGSKCTY Direction: Forward Position #: 16 Overlap #: 19 Alignment: AGTYMGAMGWTSKMGCAGRRWTCWCADBWKGRWTY ---------------AGATGCCAGCCAGAGCTCT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 312 Combined Motif Original Motif Reverse Complement AGTYMGAMGWTSKMGMRATGYYMRCMAGAGSKCTY CCCMKGGCACCCTCAGTCCT AGTYMGAMGWTSKMGCCMHGBBCACCMTMRGTCYT Direction: Forward Position #: 16 Overlap #: 20 Alignment: AGTYMGAMGWTSKMGMRATGYYMRCMAGAGSKCTY ---------------CCCMKGGCACCCTCAGTCCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 64 Combined Motif Reverse Complement Original Motif AKGACKRARGGTGBBCDRGGCYRSAWCYTCYMACT GAAGGCAGCTAAGGCCCGGY AKGACKRARGGTGBBSAAGGCWGCWAMBKCCCRSY Direction: Forward Position #: 16 Overlap #: 20 Alignment: AKGACKRARGGTGBBCDRGGCYRSAWCYTCYMACT ---------------GAAGGCAGCTAAGGCCCGGY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 150 Combined Motif Original Motif Reverse Complement AKGACKRARGGTGBBSAAGGCWGCWAMBKCCCRSY TGTGCTAGCAAT AKGACKRARGGTGBBTGWGSYAGCAAWBKCCCRSY Direction: Forward Position #: 16 Overlap #: 12 Alignment: AKGACKRARGGTGBBSAAGGCWGCWAMBKCCCRSY ---------------TGTGCTAGCAAT-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 313 Combined Motif Original Motif Reverse Complement AKGACKRARGGTGBBTGWGSYAGCAAWBKCCCRSY MGCTGAGGCAGGAG AKGACKRARGGTGBBHGYKGWRGCARKVGCCCRSY Direction: Forward Position #: 16 Overlap #: 14 Alignment: AKGACKRARGGTGBBTGWGSYAGCAAWBKCCCRSY ---------------MGCTGAGGCAGGAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 334 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 334 Motif 272 Original Motif Original Motif CATCTGTCAC CAGCTGTCAC CAKCTGTCAC Direction: Backward Position #: 1 Overlap #: 10 Alignment: CATCTGTCAC CAGCTGTCAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 1 Reverse Complement Reverse Complement GTGACAGYTG BCVTCTGTCACCCC BCVTSTGWCASCYS Direction: Forward Position #: 5 Overlap #: 10 Alignment: ----GTGACAGYTG BCVTCTGTCACCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 49 Combined Motif Reverse Complement Reverse Complement SMGSTGWCASABGB GGRRMCAGATGT SMGSTGDVAVMAGATGT Direction: Forward Position #: 6 Overlap #: 9 Alignment: SMGSTGWCASABGB--- -----GGRRMCAGATGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 205 Combined Motif Reverse Complement Reverse Complement ACATCTRVTVHCASCYS TGGGCTGCCAGATG ACATCTDGKGCYRCCAGATG Direction: Forward Position #: 7 Overlap #: 11 Alignment: ACATCTRVTVHCASCYS--- ------TGGGCTGCCAGATG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 199 Combined Motif Reverse Complement Reverse Complement CATCTGGKMGCYCDAGATGT GGTGCCAGCTGT CATCTGGKGGYBCCAGMTGT Direction: Forward Position #: 9 Overlap #: 12 Alignment: CATCTGGKMGCYCDAGATGT --------GGTGCCAGCTGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 81 Combined Motif Reverse Complement Reverse Complement ACARCTGGBMCCRCCAGATG ATTTTACAGATG ACARCTGGVHYHDMCAGATG Direction: Forward Position #: 9 Overlap #: 12 Alignment: ACARCTGGBMCCRCCAGATG --------ATTTTACAGATG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 165 Combined Motif Original Motif Original Motif ACARCTGGVHYHDMCAGATG ATCTGACAGGAGGYRGAGCT ACARCTGGATCTGACAGRWGGYRGAGCT Direction: Forward Position #: 9 Overlap #: 12 Alignment: ACARCTGGVHYHDMCAGATG-------- --------ATCTGACAGGAGGYRGAGCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 53 Combined Motif Original Motif Reverse Complement ACARCTGGATCTGACAGRWGGYRGAGCT CTTGGGTGGTCGATGGGAC ACARCTGGATCTSWYRGGTGGTVGAKSKGAC Direction: Forward Position #: 13 Overlap #: 16 Alignment: ACARCTGGATCTGACAGRWGGYRGAGCT--- ------------CTTGGGTGGTCGATGGGAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 325 Combined Motif Original Motif Original Motif ACARCTGGATCTSWYRGGTGGTVGAKSKGAC AGCAGCTGTAAATA ACARCTGGATCTSAKSRGYKGTARATAKGAC Direction: Forward Position #: 14 Overlap #: 14 Alignment: ACARCTGGATCTSWYRGGTGGTVGAKSKGAC -------------AGCAGCTGTAAATA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 260 Combined Motif Original Motif Reverse Complement ACARCTGGATCTSAKSRGYKGTARATAKGAC TTMGTCCCAGAGGGGCACC ACARCTGGATCTSWTMGKCBSWRARKGGSACC Direction: Forward Position #: 14 Overlap #: 18 Alignment: ACARCTGGATCTSAKSRGYKGTARATAKGAC- -------------TTMGTCCCAGAGGGGCACC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 269 Combined Motif Reverse Complement Original Motif GGTSCCYMTMWSBGRCRAWSAGATCCAGMTGT AGCGACATGTGC GGTSCCYMTMWSBGASCGACAKRTSCAGMTGT Direction: Forward Position #: 15 Overlap #: 12 Alignment: GGTSCCYMTMWSBGRCRAWSAGATCCAGMTGT --------------AGCGACATGTGC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 143 Combined Motif Reverse Complement Reverse Complement ACARCTGSAMRTGTCGSTCBSWRARKGGSACC GTGAGCGACGCAG ACARCTGSAMRTGTSKGWSCGASRCRGGSACC Direction: Forward Position #: 15 Overlap #: 13 Alignment: ACARCTGSAMRTGTCGSTCBSWRARKGGSACC --------------GTGAGCGACGCAG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 137 Combined Motif Original Motif Reverse Complement ACARCTGSAMRTGTSKGWSCGASRCRGGSACC TWTACCTATGTAACAAACCT ACARCTGSAMRTGTTWKACCKABGBARSAAMCCT Direction: Forward Position #: 15 Overlap #: 18 Alignment: ACARCTGSAMRTGTSKGWSCGASRCRGGSACC-- --------------TWTACCTATGTAACAAACCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 358 Combined Motif Original Motif Reverse Complement ACARCTGSAMRTGTTWKACCKABGBARSAAMCCT GGGGTGATGGACG ACARCTGSAMRTGTTGGRSYGATGGAMGAAMCCT Direction: Forward Position #: 16 Overlap #: 13 Alignment: ACARCTGSAMRTGTTWKACCKABGBARSAAMCCT ---------------GGGGTGATGGACG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 320 Combined Motif Reverse Complement Original Motif AGGYTTCRTCCATCMSMCCAACAKRTSCAGMTGT CATCTGGAGCCCCA AGGYTTCRTCCATCMCAYCTRGAGVYCCAGMTGT Direction: Forward Position #: 16 Overlap #: 14 Alignment: AGGYTTCRTCCATCMSMCCAACAKRTSCAGMTGT ---------------CATCTGGAGCCCCA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 303 Combined Motif Reverse Complement Reverse Complement ACARCTGGKVCTCMAGMTGYGATGGAMGAAMCCT ACCATCTTTAAGAACT ACARCTGGKVCTCMARMYRTSWTKRAGRAMHCCT Direction: Forward Position #: 16 Overlap #: 16 Alignment: ACARCTGGKVCTCMAGMTGYGATGGAMGAAMCCT ---------------ACCATCTTTAAGAACT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 48 Combined Motif Reverse Complement Original Motif AGGHYTKCTKRAWSAKKRKTRGAGVYCCAGMTGT AGCTCCCAGCGTGAGCGACG AGGHYTKCTKRAWSAAGSTYSCAGCBYSAGCKRYG Direction: Forward Position #: 16 Overlap #: 19 Alignment: AGGHYTKCTKRAWSAKKRKTRGAGVYCCAGMTGT- ---------------AGCTCCCAGCGTGAGCGACG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 357 Combined Motif Reverse Complement Reverse Complement CMMRGCTSMBGCTGSKASCTTSWTKRAGRAMHCCT TAATTTTATGTGTCAACTTG CMMRGCTSMBGCTGSKAAYTTBATKTRKMAACYYK Direction: Forward Position #: 16 Overlap #: 20 Alignment: CMMRGCTSMBGCTGSKASCTTSWTKRAGRAMHCCT ---------------TAATTTTATGTGTCAACTTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 29 Combined Motif Original Motif Reverse Complement CMMRGCTSMBGCTGSKAAYTTBATKTRKMAACYYK MGTCTMKCTCTGTKGCCCAG CMMRGCTSMBGCTGSHRWCTHKMTBTGTBRMCCHG Direction: Forward Position #: 16 Overlap #: 20 Alignment: CMMRGCTSMBGCTGSKAAYTTBATKTRKMAACYYK ---------------MGTCTMKCTCTGTKGCCCAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 284 Combined Motif Reverse Complement Reverse Complement CHGGRKBACABARRHAGWMHSCAGCBYSAGCKRYG TCAATGGGCTCCCAAATG CHGGRKBACABARRHWSAATGSRSYBYCARMTGYG Direction: Forward Position #: 16 Overlap #: 18 Alignment: CHGGRKBACABARRHAGWMHSCAGCBYSAGCKRYG ---------------TCAATGGGCTCCCAAATG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 225 Combined Motif Original Motif Original Motif CHGGRKBACABARRHWSAATGSRSYBYCARMTGYG GCACATGTAYCCYAGAACTT CHGGRKBACABARRHDCAMWKGWVYCCCAGAWSTK Direction: Forward Position #: 16 Overlap #: 20 Alignment: CHGGRKBACABARRHWSAATGSRSYBYCARMTGYG ---------------GCACATGTAYCCYAGAACTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 166 Combined Motif Reverse Complement Original Motif RASWTCTGGGMBWCRWRTGHHKMTBTGTBRMCCHG AAGGGACATTKGAG RASWTCTGGGMBWCRARKGBACATTTGWGRMCCHG Direction: Forward Position #: 16 Overlap #: 14 Alignment: RASWTCTGGGMBWCRWRTGHHKMTBTGTBRMCCHG ---------------AAGGGACATTKGAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 56 Combined Motif Original Motif Original Motif RASWTCTGGGMBWCRARKGBACATTTGWGRMCCHG CRTGAGCCACYGYRCCYGGC RASWTCTGGGMBWCRHRTGARCMWYTGHGVCCVVS Direction: Forward Position #: 16 Overlap #: 20 Alignment: RASWTCTGGGMBWCRARKGBACATTTGWGRMCCHG ---------------CRTGAGCCACYGYRCCYGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 145 Combined Motif Original Motif Reverse Complement RASWTCTGGGMBWCRHRTGARCMWYTGHGVCCVVS TYTGTCMTTTTGTGACTGGC RASWTCTGGGMBWCRTDTGHVCYTYTGTGHCTGGC Direction: Forward Position #: 16 Overlap #: 20 Alignment: RASWTCTGGGMBWCRHRTGARCMWYTGHGVCCVVS ---------------TYTGTCMTTTTGTGACTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 87 Combined Motif Original Motif Original Motif RASWTCTGGGMBWCRTDTGHVCYTYTGTGHCTGGC CATGTGTGTCC RASWTCTGGGMBWCRCATGTGHGTCYGTGHCTGGC Direction: Forward Position #: 16 Overlap #: 11 Alignment: RASWTCTGGGMBWCRTDTGHVCYTYTGTGHCTGGC ---------------CATGTGTGTCC--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 176 Combined Motif Reverse Complement Original Motif GCCAGHCACKGACDCACATGKGWVYCCCAGAWSTK AGGCCCCAGTGTSTGTTGTT GCCAGHCACKGACDCASRYSYSAGTSYSWGWTGTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: GCCAGHCACKGACDCACATGKGWVYCCCAGAWSTK ---------------AGGCCCCAGTGTSTGTTGTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 216 Combined Motif Reverse Complement Reverse Complement AACAWCWSMSACTSKSKKSTGHGTCYGTGHCTGGC GGTGATTTCTG AACAWCWSMSACTSKGGTGWKTTYYSGTGHCTGGC Direction: Forward Position #: 16 Overlap #: 11 Alignment: AACAWCWSMSACTSKSKKSTGHGTCYGTGHCTGGC ---------------GGTGATTTCTG--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 335 Combined Motif Reverse Complement Reverse Complement GCCAGHCACSMKAARWCACCYSAGTSYSWGWTGTT TCAGCATTAAC GCCAGHCACSMKAARTCASCMTTRWCYSWGWTGTT Direction: Forward Position #: 16 Overlap #: 11 Alignment: GCCAGHCACSMKAARWCACCYSAGTSYSWGWTGTT ---------------TCAGCATTAAC--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 348 Combined Motif Reverse Complement Original Motif AACAWCWSMGWKAAYGSTGAKTTYYSGTGHCTGGC ATGGCCTATGACYGSTTTG AACAWCWSMGWKAAYRTKGMCTWTKRSYGVYTKGC Direction: Forward Position #: 16 Overlap #: 19 Alignment: AACAWCWSMGWKAAYGSTGAKTTYYSGTGHCTGGC ---------------ATGGCCTATGACYGSTTTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 83 Combined Motif Original Motif Reverse Complement AACAWCWSMGWKAAYRTKGMCTWTKRSYGVYTKGC GTKTMTATMTACCACATTTT AACAWCWSMGWKAAYGTKKMYWTHKACCRCHTTKY Direction: Forward Position #: 16 Overlap #: 20 Alignment: AACAWCWSMGWKAAYRTKGMCTWTKRSYGVYTKGC ---------------GTKTMTATMTACCACATTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 70 Combined Motif Original Motif Reverse Complement AACAWCWSMGWKAAYGTKKMYWTHKACCRCHTTKY GCAGCAMTATTCACAATAG AACAWCWSMGWKAAYGYRGCHHTATWCMMMATWGY Direction: Forward Position #: 16 Overlap #: 19 Alignment: AACAWCWSMGWKAAYGTKKMYWTHKACCRCHTTKY ---------------GCAGCAMTATTCACAATAG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 280 Combined Motif Reverse Complement Original Motif MCWATYRYGWATAHHGCKKCMTTRWCYSWGWTGTT CCTAGATTTCAGARGATGT MCWATYRYGWATAHHSCTASATTWCMKVDGATGTT Direction: Forward Position #: 16 Overlap #: 19 Alignment: MCWATYRYGWATAHHGCKKCMTTRWCYSWGWTGTT ---------------CCTAGATTTCAGARGATGT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 27 Combined Motif Reverse Complement Reverse Complement AACATCDBYYGWAATSTAGSHHTATWCMMMATWGY CGCCCCGTCTGGGAAGTG AACATCDBYYGWAATCKMSCCVTMTKSGAARTGGY Direction: Forward Position #: 16 Overlap #: 18 Alignment: AACATCDBYYGWAATSTAGSHHTATWCMMMATWGY ---------------CGCCCCGTCTGGGAAGTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 23 Combined Motif Reverse Complement Original Motif MCCAMTTCSYARAVGGSRYGATTWCMKVDGATGTT GGTTCATCTCACTAGGGAGT MCCAMTTCSYARAVGGGTTSATYTCACTRGRKRKT Direction: Forward Position #: 16 Overlap #: 20 Alignment: MCCAMTTCSYARAVGGSRYGATTWCMKVDGATGTT ---------------GGTTCATCTCACTAGGGAGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 356 Combined Motif Reverse Complement Reverse Complement ARKYMCKAGTGAKATSAACCCVTMTKSGAARTGGY CAGTCTGTGTCTTTTAATT ARKYMCKAGTGAKATCARYCYGTSTSTKWWAWKKY Direction: Forward Position #: 16 Overlap #: 19 Alignment: ARKYMCKAGTGAKATSAACCCVTMTKSGAARTGGY ---------------CAGTCTGTGTCTTTTAATT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 264 Combined Motif Reverse Complement Original Motif MRRWTWWRASASACMGMMTGATYTCACTRGRKRKT CCAAGGTCACA MRRWTWWRASASACMSCAWGRTCWCACTRGRKRKT Direction: Forward Position #: 16 Overlap #: 11 Alignment: MRRWTWWRASASACMGMMTGATYTCACTRGRKRKT ---------------CCAAGGTCACA--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 94 Combined Motif Reverse Complement Reverse Complement ARKYMCKAGTGWGAMCWTGSYGTSTSTKWWAWKKY GMTTAGCTCCCACTTA ARKYMCKAGTGWGAMSHTKRKSTCYCWYTTAWKKY Direction: Forward Position #: 16 Overlap #: 16 Alignment: ARKYMCKAGTGWGAMCWTGSYGTSTSTKWWAWKKY ---------------GMTTAGCTCCCACTTA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 306 Combined Motif Original Motif Reverse Complement ARKYMCKAGTGWGAMSHTKRKSTCYCWYTTAWKKY CAAGCGCCAGCTCATGTC ARKYMCKAGTGWGAMCAWGMGCYMGCTCWTRTYKY Direction: Forward Position #: 16 Overlap #: 18 Alignment: ARKYMCKAGTGWGAMSHTKRKSTCYCWYTTAWKKY ---------------CAAGCGCCAGCTCATGTC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 112 Combined Motif Reverse Complement Original Motif MRKAMAWGAGCYKGCRCWTGRTCWCACTRGRKRKT GCTGTGTGACCTTGGGCAAG MRKAMAWGAGCYKGCGCTKKGTSACMYTRGGBADK Direction: Forward Position #: 16 Overlap #: 20 Alignment: MRKAMAWGAGCYKGCRCWTGRTCWCACTRGRKRKT ---------------GCTGTGTGACCTTGGGCAAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 175 Combined Motif Original Motif Reverse Complement MRKAMAWGAGCYKGCGCTKKGTSACMYTRGGBADK GCACTCTGTMTCTAGCT MRKAMAWGAGCYKGCGCWCKSTGTCTCTAGSTADK Direction: Forward Position #: 16 Overlap #: 17 Alignment: MRKAMAWGAGCYKGCGCTKKGTSACMYTRGGBADK ---------------GCACTCTGTMTCTAGCT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 178 Combined Motif Original Motif Original Motif MRKAMAWGAGCYKGCGCWCKSTGTCTCTAGSTADK ACTGTCTTCCACCTCCACAT MRKAMAWGAGCYKGCRCTGTCTKYCWCYWSCWMAT Direction: Forward Position #: 16 Overlap #: 20 Alignment: MRKAMAWGAGCYKGCGCWCKSTGTCTCTAGSTADK ---------------ACTGTCTTCCACCTCCACAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 76 Combined Motif Reverse Complement Reverse Complement ATRWGSWKGWGKRAGACAGKGCYMGCTCWTRTYKY CMTAGYACAGTGCCTGGCAC ATRWGSWKGWGKRAGMCWRKBMCAGYKCMTGKCWC Direction: Forward Position #: 16 Overlap #: 20 Alignment: ATRWGSWKGWGKRAGACAGKGCYMGCTCWTRTYKY ---------------CMTAGYACAGTGCCTGGCAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 275 Combined Motif Original Motif Reverse Complement ATRWGSWKGWGKRAGMCWRKBMCAGYKCMTGKCWC TTTAACTCTGTGAG ATRWGSWKGWGKRAGTYTARCHCWGTGMVTGKCWC Direction: Forward Position #: 16 Overlap #: 14 Alignment: ATRWGSWKGWGKRAGMCWRKBMCAGYKCMTGKCWC ---------------TTTAACTCTGTGAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 235 Combined Motif Original Motif Original Motif ATRWGSWKGWGKRAGTYTARCHCWGTGMVTGKCWC TCCAAATGGGAGAAATTGGC ATRWGSWKGWGKRAGTYYAAMTSDGWGAAWKTSRC Direction: Forward Position #: 16 Overlap #: 20 Alignment: ATRWGSWKGWGKRAGTYTARCHCWGTGMVTGKCWC ---------------TCCAAATGGGAGAAATTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 227 Combined Motif Original Motif Reverse Complement ATRWGSWKGWGKRAGTYYAAMTSDGWGAAWKTSRC ATTCAASATGAGATTTGGG ATRWGSWKGWGKRAGWTTMAABVTGAGAWTTKGGC Direction: Forward Position #: 16 Overlap #: 19 Alignment: ATRWGSWKGWGKRAGTYYAAMTSDGWGAAWKTSRC ---------------ATTCAASATGAGATTTGGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 138 Combined Motif Original Motif Original Motif ATRWGSWKGWGKRAGWTTMAABVTGAGAWTTKGGC CAGCCAGATCRSCC ATRWGSWKGWGKRAGHWKCMAGATSASMYTTKGGC Direction: Forward Position #: 16 Overlap #: 14 Alignment: ATRWGSWKGWGKRAGWTTMAABVTGAGAWTTKGGC ---------------CAGCCAGATCRSCC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 329 Combined Motif Reverse Complement Reverse Complement GCCYAAKRSTSATCTRGYWDCTKYCWCYWSCWMAT GCTAATATATCCCTCCC GCCYAAKRSTSATCTGSTAAYWTMYMCCTCCCMAT Direction: Forward Position #: 16 Overlap #: 17 Alignment: GCCYAAKRSTSATCTRGYWDCTKYCWCYWSCWMAT ---------------GCTAATATATCCCTCCC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 312 Combined Motif Reverse Complement Original Motif ATRGGGAGGRMYAWMTTASCAGATSASMYTTKGGC AGGACTGAGGGTGCCYRGGG ATRGGGAGGRMYAWMWKRACWGAKGRKVCYYGGGS Direction: Forward Position #: 16 Overlap #: 20 Alignment: ATRGGGAGGRMYAWMTTASCAGATSASMYTTKGGC ---------------AGGACTGAGGGTGCCYRGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 189 Combined Motif Reverse Complement Original Motif SCCCMKGVRMCYTCWGTMYWYWTMYMCCTCCCMAT ATCCAGTCTATCATTG SCCCMKGVRMCYTCWRTCCAKTYTWYCMTYSCMAT Direction: Forward Position #: 16 Overlap #: 16 Alignment: SCCCMKGVRMCYTCWGTMYWYWTMYMCCTCCCMAT ---------------ATCCAGTCTATCATTG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 261 Combined Motif Original Motif Original Motif SCCCMKGVRMCYTCWRTCCAKTYTWYCMTYSCMAT ATCTCASAAATCACCACTA SCCCMKGVRMCYTCWATCYMABMWATCAYCRCHAT Direction: Forward Position #: 16 Overlap #: 19 Alignment: SCCCMKGVRMCYTCWRTCCAKTYTWYCMTYSCMAT ---------------ATCTCASAAATCACCACTA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ******************************************************* Combined Motifs for Top Global and Local Significant Motif ID 335 and Its Best Matches ****************************************************** ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1st motif name 2nd motif name 1st format 2nd format 1st motif 2nd motif Combined motif ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 335 Motif 184 Original Motif Original Motif GTTAATGCTGA ATATTGATGATCCTGACC ATATTGWTRATSCTGACC Direction: Forward Position #: 6 Overlap #: 11 Alignment: -----GTTAATGCTGA-- ATATTGATGATCCTGACC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Combined Motif Motif 262 Reverse Complement Reverse Complement GGTCAGSATKAWCAATAT GACAGGAGATTAACACTGAG GACAGGAGRKTMASMMTGAGCAATAT Direction: Forward Position #: 9 Overlap #: 12 Alignment: --------GGTCAGSATKAWCAATAT GACAGGAGATTAACACTGAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 278 Combined Motif Reverse Complement Original Motif ATATTGCTCAYYSTYARKCTCCTGTC ACTTTCAGGCATAACA ATATTGCTCAYACTTWCASKCMTRWCA Direction: Forward Position #: 12 Overlap #: 15 Alignment: ATATTGCTCAYYSTYARKCTCCTGTC- -----------ACTTTCAGGCATAACA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 261 Combined Motif Reverse Complement Reverse Complement TGWMAYGYSTGWAAGTMTGAGCAATAT TAGTGGTGATTTSTGAGAT TGWMAYGYSTGTARKKVTGATYWRTRWGAT Direction: Forward Position #: 12 Overlap #: 16 Alignment: TGWMAYGYSTGWAAGTMTGAGCAATAT--- -----------TAGTGGTGATTTSTGAGAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 102 Combined Motif Original Motif Reverse Complement TGWMAYGYSTGTARKKVTGATYWRTRWGAT GTTGTGAGGATTAAATGAG TGWMAYGYSTGTARTKGTGAKBADTAARWKAG Direction: Forward Position #: 14 Overlap #: 17 Alignment: TGWMAYGYSTGTARKKVTGATYWRTRWGAT-- -------------GTTGTGAGGATTAAATGAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 70 Combined Motif Reverse Complement Reverse Complement CTRWMTTADTBYTCACRAMTACASKCMTRWCA GCAGCAMTATTCACAATAG CTRWMTTADTBYTCRCARCWABABTCAYAAYAG Direction: Forward Position #: 15 Overlap #: 18 Alignment: CTRWMTTADTBYTCACRAMTACASKCMTRWCA- --------------GCAGCAMTATTCACAATAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 115 Combined Motif Reverse Complement Reverse Complement CTKTTMTGAVTVTWGMTGKGAKBADTAARWKAG HAGTGGKATTGCTGGATCAT CTKTTMTGAVTVTWDAKKGGRATWKYWRGATMRT Direction: Forward Position #: 15 Overlap #: 19 Alignment: CTKTTMTGAVTVTWGMTGKGAKBADTAARWKAG- --------------HAGTGGKATTGCTGGATCAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 303 Combined Motif Original Motif Original Motif CTKTTMTGAVTVTWDAKKGGRATWKYWRGATMRT AGTTCTTAAAGATGGT CTKTTMTGAVTVTWDAGTTSTTWWABWTGDTMRT Direction: Forward Position #: 16 Overlap #: 16 Alignment: CTKTTMTGAVTVTWDAKKGGRATWKYWRGATMRT ---------------AGTTCTTAAAGATGGT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 233 Combined Motif Original Motif Reverse Complement CTKTTMTGAVTVTWDAGTTSTTWWABWTGDTMRT AGGCTGTTTTACAGTTAAC CTKTTMTGAVTVTWDAGKYYKTTTWRMWGTTAAY Direction: Forward Position #: 16 Overlap #: 19 Alignment: CTKTTMTGAVTVTWDAGTTSTTWWABWTGDTMRT ---------------AGGCTGTTTTACAGTTAAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 224 Combined Motif Original Motif Original Motif CTKTTMTGAVTVTWDAGKYYKTTTWRMWGTTAAY AATGAGTTAAGACTTTG CTKTTMTGAVTVTWDARTGWGTTWAGAMKTTRAY Direction: Forward Position #: 16 Overlap #: 17 Alignment: CTKTTMTGAVTVTWDAGKYYKTTTWRMWGTTAAY ---------------AATGAGTTAAGACTTTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 275 Combined Motif Reverse Complement Original Motif KTMAARRTCTWAACWCAKTHWABABTCAYAAYAG CTCACAGAGTTAAA KTMAARRTCTWAACWCWBWCARARTTMAAAAYAG Direction: Forward Position #: 16 Overlap #: 14 Alignment: KTMAARRTCTWAACWCAKTHWABABTCAYAAYAG ---------------CTCACAGAGTTAAA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 48 Combined Motif Reverse Complement Reverse Complement CTKTTTTYAAMTMTGWBWGWGTTWAGAMKTTRAY CGTCGCTCACGCTGGGAGCT CTKTTTTYAAMTMTGHGTSDSTYAMGMTGKKARCT Direction: Forward Position #: 16 Overlap #: 19 Alignment: CTKTTTTYAAMTMTGWBWGWGTTWAGAMKTTRAY- ---------------CGTCGCTCACGCTGGGAGCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 196 Combined Motif Reverse Complement Original Motif AGMTYYCARCYTKASHSACDCARARTTMAAAAYAG CCTGCCATTGCYSAGGCTTG AGMTYYCARCYTKASCCWSVCATTGYTMARRMTWG Direction: Forward Position #: 16 Overlap #: 20 Alignment: AGMTYYCARCYTKASHSACDCARARTTMAAAAYAG ---------------CCTGCCATTGCYSAGGCTTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 325 Combined Motif Reverse Complement Original Motif CWARMMTRAKCAATGVSWGGSTYAMGMTGKKARCT AGCAGCTGTAAATA CWARMMTRAKCAATGAGCRGCTBWARATRKKARCT Direction: Forward Position #: 16 Overlap #: 14 Alignment: CWARMMTRAKCAATGVSWGGSTYAMGMTGKKARCT ---------------AGCAGCTGTAAATA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 287 Combined Motif Original Motif Reverse Complement CWARMMTRAKCAATGAGCRGCTBWARATRKKARCT CAMTTAGCATAATG CWARMMTRAKCAATGMRMDKMKSAWAATGKKARCT Direction: Forward Position #: 16 Overlap #: 14 Alignment: CWARMMTRAKCAATGAGCRGCTBWARATRKKARCT ---------------CAMTTAGCATAATG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 227 Combined Motif Original Motif Original Motif CWARMMTRAKCAATGMRMDKMKSAWAATGKKARCT CCCAAATCTCATSTTGAAT CWARMMTRAKCAATGCCCAAATCWYAWYKTGAAYT Direction: Forward Position #: 16 Overlap #: 19 Alignment: CWARMMTRAKCAATGMRMDKMKSAWAATGKKARCT ---------------CCCAAATCTCATSTTGAAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 117 Combined Motif Reverse Complement Original Motif AMTTCARMWTKWGATTTGGGCATTGYTMARRMTWG AACAACAACAACAAMAA AMTTCARMWTKWGATAWVARCAAYRMYAAVAMTWG Direction: Forward Position #: 16 Overlap #: 17 Alignment: AMTTCARMWTKWGATTTGGGCATTGYTMARRMTWG ---------------AACAACAACAACAAMAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 266 Combined Motif Reverse Complement Reverse Complement CWAYTBTTKYKKTTGKTVWTATCWYAWYKTGAAYT TGCTGCTGCTGC CWAYTBTTKYKKTTGTKCTKMTSYYRCYKTGAAYT Direction: Forward Position #: 16 Overlap #: 12 Alignment: CWAYTBTTKYKKTTGKTVWTATCWYAWYKTGAAYT ---------------TGCTGCTGCTGC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 246 Combined Motif Original Motif Original Motif CWAYTBTTKYKKTTGTKCTKMTSYYRCYKTGAAYT GCAGCTTCACTCCTGA CWAYTBTTKYKKTTGKSMKBYTCACTCCTKRAAYT Direction: Forward Position #: 16 Overlap #: 16 Alignment: CWAYTBTTKYKKTTGTKCTKMTSYYRCYKTGAAYT ---------------GCAGCTTCACTCCTGA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 84 Combined Motif Reverse Complement Reverse Complement AMTTKYAGGAGTGAMBYYSYCAAYRMYAAVAMTWG GGCACTGCTGGGGGACCCAG AMTTKYAGGAGTGAMGSCRCYRMTGGSRRAMMYAG Direction: Forward Position #: 16 Overlap #: 20 Alignment: AMTTKYAGGAGTGAMBYYSYCAAYRMYAAVAMTWG ---------------GGCACTGCTGGGGGACCCAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 86 Combined Motif Original Motif Reverse Complement AMTTKYAGGAGTGAMGSCRCYRMTGGSRRAMMYAG VMATTTAKTGAGCACCTACT AMTTKYAGGAGTGAMVVMDYTABTGAGVAMMYMMK Direction: Forward Position #: 16 Overlap #: 20 Alignment: AMTTKYAGGAGTGAMGSCRCYRMTGGSRRAMMYAG ---------------VMATTTAKTGAGCACCTACT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 26 Combined Motif Original Motif Original Motif AMTTKYAGGAGTGAMVVMDYTABTGAGVAMMYMMK CTCCTGCCTCAGCCTCCCRA AMTTKYAGGAGTGAMCTCHYDVCTSAGCMHCYCVR Direction: Forward Position #: 16 Overlap #: 20 Alignment: AMTTKYAGGAGTGAMVVMDYTABTGAGVAMMYMMK ---------------CTCCTGCCTCAGCCTCCCRA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 277 Combined Motif Original Motif Reverse Complement AMTTKYAGGAGTGAMCTCHYDVCTSAGCMHCYCVR GCTTCTGGTGAGGGC AMTTKYAGGAGTGAMGYYTCTGSTGAGSGCCYCVR Direction: Forward Position #: 16 Overlap #: 15 Alignment: AMTTKYAGGAGTGAMCTCHYDVCTSAGCMHCYCVR ---------------GCTTCTGGTGAGGGC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 254 Combined Motif Reverse Complement Reverse Complement KBGKGGCSCTCASCAGAMKCYTCACTCCTKRAAYT ATAGGAATGCTTGTGATTTT KBGKGGCSCTCASCARWAGSAWYVCTYSTGAWWTT Direction: Forward Position #: 16 Overlap #: 20 Alignment: KBGKGGCSCTCASCAGAMKCYTCACTCCTKRAAYT ---------------ATAGGAATGCTTGTGATTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 332 Combined Motif Reverse Complement Reverse Complement AAWWTCASMAGVMWTSCTWKTGSTGAGSGCCYCVR GTTTAACCATTGAGGGCCAG AAWWTCASMAGVMWTGTTTAWCSWKWGRGSSCCAG Direction: Forward Position #: 16 Overlap #: 20 Alignment: AAWWTCASMAGVMWTSCTWKTGSTGAGSGCCYCVR ---------------GTTTAACCATTGAGGGCCAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 18 Combined Motif Reverse Complement Original Motif CTGGSSCKCWRWSGWTAAACAWYVCTYSTGAWWTT GAAAAGCGCAGTATTMGGG CTGGSSCKCWRWSGWGAAAMRHBCMKTVTKAGGKT Direction: Forward Position #: 16 Overlap #: 19 Alignment: CTGGSSCKCWRWSGWTAAACAWYVCTYSTGAWWTT ---------------GAAAAGCGCAGTATTMGGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 256 Combined Motif Original Motif Original Motif CTGGSSCKCWRWSGWGAAAMRHBCMKTVTKAGGKT RCAGTGTACACTGY CTGGSSCKCWRWSGWGMARTGTACABTRTKAGGKT Direction: Forward Position #: 16 Overlap #: 14 Alignment: CTGGSSCKCWRWSGWGAAAMRHBCMKTVTKAGGKT ---------------RCAGTGTACACTGY------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 336 Combined Motif Reverse Complement Original Motif AYCCTRAMABTGTACAKTRCWCSWKWGRGSSCCAG ATGTAACCAAAYACCACCTG AYCCTRAMABTGTACATKTMACCAAABASCACCWG Direction: Forward Position #: 16 Overlap #: 20 Alignment: AYCCTRAMABTGTACAKTRCWCSWKWGRGSSCCAG ---------------ATGTAACCAAAYACCACCTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 179 Combined Motif Original Motif Original Motif AYCCTRAMABTGTACATKTMACCAAABASCACCWG AGGTCCTTCAGGAGGTATTC AYCCTRAMABTGTACAKGTCMYYMARGAGSWMYTS Direction: Forward Position #: 16 Overlap #: 20 Alignment: AYCCTRAMABTGTACATKTMACCAAABASCACCWG ---------------AGGTCCTTCAGGAGGTATTC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 225 Combined Motif Original Motif Reverse Complement AYCCTRAMABTGTACAKGTCMYYMARGAGSWMYTS AAGTTCTKGGKTACATGTGC AYCCTRAMABTGTACARGTYCTKVRKKASRTVTKC Direction: Forward Position #: 16 Overlap #: 20 Alignment: AYCCTRAMABTGTACAKGTCMYYMARGAGSWMYTS ---------------AAGTTCTKGGKTACATGTGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 202 Combined Motif Original Motif Reverse Complement AYCCTRAMABTGTACARGTYCTKVRKKASRTVTKC GAAACTGCTTTGTGATGTGT AYCCTRAMABTGTACRARWYYKCTKTGWGATGTGY Direction: Forward Position #: 16 Overlap #: 20 Alignment: AYCCTRAMABTGTACARGTYCTKVRKKASRTVTKC ---------------GAAACTGCTTTGTGATGTGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 64 Combined Motif Original Motif Original Motif AYCCTRAMABTGTACRARWYYKCTKTGWGATGTGY GAAGGCAGCTAAGGCCCGGY AYCCTRAMABTGTACGAARSCAGCTWRGGMYSKGY Direction: Forward Position #: 16 Overlap #: 20 Alignment: AYCCTRAMABTGTACRARWYYKCTKTGWGATGTGY ---------------GAAGGCAGCTAAGGCCCGGY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 98 Combined Motif Original Motif Original Motif AYCCTRAMABTGTACGAARSCAGCTWRGGMYSKGY AGTTCCGGGTGGGCGTGGG AYCCTRAMABTGTACRRWTCCRGSTRGGSVTGGGY Direction: Forward Position #: 16 Overlap #: 19 Alignment: AYCCTRAMABTGTACGAARSCAGCTWRGGMYSKGY ---------------AGTTCCGGGTGGGCGTGGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 178 Combined Motif Original Motif Reverse Complement AYCCTRAMABTGTACRRWTCCRGSTRGGSVTGGGY ATGTGGAGGTGGAAGACAGT AYCCTRAMABTGTACAKKTSSAGGTGGRMGWSRGT Direction: Forward Position #: 16 Overlap #: 20 Alignment: AYCCTRAMABTGTACRRWTCCRGSTRGGSVTGGGY ---------------ATGTGGAGGTGGAAGACAGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 328 Combined Motif Reverse Complement Reverse Complement ACKSWCYKCCACCTSSAYRTGTACABTRTKAGGKT KACATTGATTTTGTATC ACKSWCYKCCACCTSBACATKKAYWTTGTWWSGKT Direction: Forward Position #: 16 Overlap #: 17 Alignment: ACKSWCYKCCACCTSSAYRTGTACABTRTKAGGKT ---------------KACATTGATTTTGTATC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 211 Combined Motif Original Motif Original Motif ACKSWCYKCCACCTSBACATKKAYWTTGTWWSGKT GACTTCAAGAATGAAGCCG ACKSWCYKCCACCTSGACWTBAAKADTGWAGCBGT Direction: Forward Position #: 16 Overlap #: 19 Alignment: ACKSWCYKCCACCTSBACATKKAYWTTGTWWSGKT ---------------GACTTCAAGAATGAAGCCG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 170 Combined Motif Reverse Complement Original Motif ACBGCTWCADTYTTBAWGTCSAGGTGGRMGWSRGT AATCAACCCTGGYRATCAAT ACBGCTWCADTYTTBAAKYMVMSSTGGHRRTCART Direction: Forward Position #: 16 Overlap #: 20 Alignment: ACBGCTWCADTYTTBAWGTCSAGGTGGRMGWSRGT ---------------AATCAACCCTGGYRATCAAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 94 Combined Motif Reverse Complement Original Motif AMTGAKMHCCASSRBYKRTTBAAKADTGWAGCBGT TAAGTGGGAGCTAARC AMTGAKMHCCASSRBTAAKTGRRRRCTRARBCBGT Direction: Forward Position #: 16 Overlap #: 16 Alignment: AMTGAKMHCCASSRBYKRTTBAAKADTGWAGCBGT ---------------TAAGTGGGAGCTAARC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 349 Combined Motif Original Motif Reverse Complement AMTGAKMHCCASSRBTAAKTGRRRRCTRARBCBGT TTCAMTCATGATTTGGCTCT AMTGAKMHCCASSRBTHMAYKSATGATDWGGCTST Direction: Forward Position #: 16 Overlap #: 20 Alignment: AMTGAKMHCCASSRBTAAKTGRRRRCTRARBCBGT ---------------TTCAMTCATGATTTGGCTCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 354 Combined Motif Original Motif Original Motif AMTGAKMHCCASSRBTHMAYKSATGATDWGGCTST GCTGATAAAGAC AMTGAKMHCCASSRBKCTRATAAAGAYDWGGCTST Direction: Forward Position #: 16 Overlap #: 12 Alignment: AMTGAKMHCCASSRBTHMAYKSATGATDWGGCTST ---------------GCTGATAAAGAC-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 214 Combined Motif Original Motif Original Motif AMTGAKMHCCASSRBKCTRATAAAGAYDWGGCTST CTCAGGAATGGAAAACC AMTGAKMHCCASSRBCTCARKAATGRHAARSCTST Direction: Forward Position #: 16 Overlap #: 17 Alignment: AMTGAKMHCCASSRBKCTRATAAAGAYDWGGCTST ---------------CTCAGGAATGGAAAACC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 357 Combined Motif Original Motif Reverse Complement AMTGAKMHCCASSRBCTCARKAATGRHAARSCTST TAATTTTATGTGTCAACTTG AMTGAKMHCCASSRBTWMWDTWATGTDTMAMCTTK Direction: Forward Position #: 16 Overlap #: 20 Alignment: AMTGAKMHCCASSRBCTCARKAATGRHAARSCTST ---------------TAATTTTATGTGTCAACTTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 307 Combined Motif Original Motif Original Motif AMTGAKMHCCASSRBTWMWDTWATGTDTMAMCTTK AGATGCCAGCCAGAGCTCT AMTGAKMHCCASSRBWDATGYCAKSYRKARCYYTK Direction: Forward Position #: 16 Overlap #: 19 Alignment: AMTGAKMHCCASSRBTWMWDTWATGTDTMAMCTTK ---------------AGATGCCAGCCAGAGCTCT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 313 Combined Motif Reverse Complement Reverse Complement RAKMGMTYKKSYTGKCATHWVMSSTGGHRRTCART MGCTGAGGCAGGAG RAKMGMTYKKSYTGKMRYTGAGGCWGGAGRTCART Direction: Forward Position #: 16 Overlap #: 14 Alignment: RAKMGMTYKKSYTGKCATHWVMSSTGGHRRTCART ---------------MGCTGAGGCAGGAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 12 Combined Motif Original Motif Original Motif RAKMGMTYKKSYTGKMRYTGAGGCWGGAGRTCART AGACCAGCCTGGCCAAC RAKMGMTYKKSYTGKAGMYSAGSCTGGVSAWCART Direction: Forward Position #: 16 Overlap #: 17 Alignment: RAKMGMTYKKSYTGKMRYTGAGGCWGGAGRTCART ---------------AGACCAGCCTGGCCAAC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 190 Combined Motif Reverse Complement Original Motif AMTGWTSVCCAGSCTSKYCTYCAKSYRKARCYYTK CAAAGGCATAAGAATGAT AMTGWTSVCCAGSCTCRAMKGCATAAGAADSAYTK Direction: Forward Position #: 16 Overlap #: 18 Alignment: AMTGWTSVCCAGSCTSKYCTYCAKSYRKARCYYTK ---------------CAAAGGCATAAGAATGAT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 220 Combined Motif Reverse Complement Reverse Complement RAMTSDTTCTTATGCYYTKGAGSCTGGVSAWCART GTGGGTGCAGTGCA RAMTSDTTCTTATGCSTKKGWGCMKKGCAAWCART Direction: Forward Position #: 16 Overlap #: 14 Alignment: RAMTSDTTCTTATGCYYTKGAGSCTGGVSAWCART ---------------GTGGGTGCAGTGCA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 199 Combined Motif Original Motif Reverse Complement RAMTSDTTCTTATGCSTKKGWGCMKKGCAAWCART GGTGCCAGCTGT RAMTSDTTCTTATGCGKTGSYRSCTGKCAAWCART Direction: Forward Position #: 16 Overlap #: 12 Alignment: RAMTSDTTCTTATGCSTKKGWGCMKKGCAAWCART ---------------GGTGCCAGCTGT-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 154 Combined Motif Reverse Complement Reverse Complement AMTGWTTGYCAGSKKSCAYCGCATAAGAADSAYTK TCCTATGAGAATCTAATG AMTGWTTGYCAGSKKKCMTMKSAKAAKMWAATKTK Direction: Forward Position #: 16 Overlap #: 18 Alignment: AMTGWTTGYCAGSKKSCAYCGCATAAGAADSAYTK ---------------TCCTATGAGAATCTAATG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif 21 Combined Motif Original Motif Reverse Complement AMTGWTTGYCAGSKKKCMTMKSAKAAKMWAATKTK KACGGGCTTAARAAACGGC AMTGWTTGYCAGSKKKMMBGKCWTAADAAAMKGYK Direction: Forward Position #: 16 Overlap #: 19 Alignment: AMTGWTTGYCAGSKKKCMTMKSAKAAKMWAATKTK ---------------KACGGGCTTAARAAACGGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Results created by MOTIFSIM on 03-26-2023 13:05:23 Runtime: 1419.98 seconds MOTIFSIM is written by Ngoc Tam L. 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