**************************************************************************************************************************************************************************************************** MOTIFSIM - Motif Similarity Detection Tool Version 2.2 **************************************************************************************************************************************************************************************************** INPUT **************************************************************************************************************************************************************************************************** Input Parameters Number of files: 1 Number of top significant motifs: 4 Number of best matches: 4 Similarity cutoff: >= 0.5 Matching motif database: Jaspar Core Motif tree: Yes Combined similar motifs: No Output file type: All Output file format: All Input files and motif counts File name Count of motifs Dataset # U20240419_R_04-19-24_1712_InsertFile1.txt 3 1 **************************************************************************************************************************************************************************************************** RESULTS **************************************************************************************************************************************************************************************************** **************************************************************************************************************************************************************************************************** ****************************************************************** Top 4 Significant Motifs - Global Matching (Highest to Lowest) ****************************************************************** There is no global matching for 1 motif file. **************************************************************************************************************************************************************************************************** **************************************************************** Significant Motifs - Global and Local Matching (Highest to Lowest) **************************************************************** Dataset #: 1 Motif ID: 2 Motif name: Motif 2 Original motif 0.873146 0.020895 0.082216 0.023743 0.029083 0.040478 0.921401 0.009038 0.000126 0.975671 0.000121 0.024082 0.000126 0.000121 0.985664 0.014089 0.186842 0.806066 0.000121 0.006971 0.001545 0.996789 0.000121 0.001545 0.252276 0.432773 0.285184 0.029766 0.017442 0.849054 0.000121 0.133383 0.000126 0.992782 0.006966 0.000126 0.053528 0.053996 0.026393 0.866083 0.594629 0.003540 0.369067 0.032764 Consensus sequence: AGCGCCVCCTR Reverse complement motif 0.032764 0.003540 0.369067 0.594629 0.866083 0.053996 0.026393 0.053528 0.000126 0.006966 0.992782 0.000126 0.017442 0.000121 0.849054 0.133383 0.252276 0.285184 0.432773 0.029766 0.001545 0.000121 0.996789 0.001545 0.186842 0.000121 0.806066 0.006971 0.000126 0.985664 0.000121 0.014089 0.000126 0.000121 0.975671 0.024082 0.029083 0.921401 0.040478 0.009038 0.023743 0.020895 0.082216 0.873146 Consensus sequence: KAGGVGGCGCT ******************************************************************* Best Matches for Significant Motif ID 2 (Highest to Lowest) ******************************************************************* Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 3 Motif 3 Original Motif Original Motif Forward 1 11 0.000000 Original motif 0.873146 0.020895 0.082216 0.023743 0.029083 0.040478 0.921401 0.009038 0.000126 0.975671 0.000121 0.024082 0.000126 0.000121 0.985664 0.014089 0.186842 0.806066 0.000121 0.006971 0.001545 0.996789 0.000121 0.001545 0.252276 0.432773 0.285184 0.029766 0.017442 0.849054 0.000121 0.133383 0.000126 0.992782 0.006966 0.000126 0.053528 0.053996 0.026393 0.866083 0.594629 0.003540 0.369067 0.032764 Consensus sequence: AGCGCCVCCTR Reverse complement motif 0.032764 0.003540 0.369067 0.594629 0.866083 0.053996 0.026393 0.053528 0.000126 0.006966 0.992782 0.000126 0.017442 0.000121 0.849054 0.133383 0.252276 0.285184 0.432773 0.029766 0.001545 0.000121 0.996789 0.001545 0.186842 0.000121 0.806066 0.006971 0.000126 0.985664 0.000121 0.014089 0.000126 0.000121 0.975671 0.024082 0.029083 0.921401 0.040478 0.009038 0.023743 0.020895 0.082216 0.873146 Consensus sequence: KAGGVGGCGCT Alignment: AGCGCCVCCTR AGCGCCVCCTR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 1 Motif 1 Original Motif Original Motif Backward 1 11 0.120204 Original motif 0.898388 0.000066 0.014852 0.086694 0.000087 0.000066 0.993423 0.006424 0.810905 0.069774 0.119234 0.000087 0.000087 0.006403 0.286115 0.707395 0.000087 0.000066 0.999760 0.000087 0.012761 0.000066 0.987086 0.000087 0.017861 0.967200 0.012740 0.002199 0.004312 0.000066 0.995535 0.000087 0.057121 0.794854 0.080336 0.067689 0.106584 0.084561 0.012740 0.796115 0.587349 0.239281 0.143710 0.029660 0.107819 0.044426 0.190185 0.657570 0.414124 0.052881 0.082449 0.450545 0.217310 0.385406 0.158496 0.238788 0.365178 0.427653 0.097238 0.109931 Consensus sequence: AGATGGCGCTATWHM Reverse complement motif 0.365178 0.097238 0.427653 0.109931 0.217310 0.158496 0.385406 0.238788 0.450545 0.052881 0.082449 0.414124 0.657570 0.044426 0.190185 0.107819 0.029660 0.239281 0.143710 0.587349 0.796115 0.084561 0.012740 0.106584 0.057121 0.080336 0.794854 0.067689 0.004312 0.995535 0.000066 0.000087 0.017861 0.012740 0.967200 0.002199 0.012761 0.987086 0.000066 0.000087 0.000087 0.999760 0.000066 0.000087 0.707395 0.006403 0.286115 0.000087 0.000087 0.069774 0.119234 0.810905 0.000087 0.993423 0.000066 0.006424 0.086694 0.000066 0.014852 0.898388 Consensus sequence: RDWATAGCGCCATCT Alignment: AGATGGCGCTATWHM ----AGCGCCVCCTR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 3 Motif name: Motif 3 Original motif 0.873146 0.020895 0.082216 0.023743 0.029083 0.040478 0.921401 0.009038 0.000126 0.975671 0.000121 0.024082 0.000126 0.000121 0.985664 0.014089 0.186842 0.806066 0.000121 0.006971 0.001545 0.996789 0.000121 0.001545 0.252276 0.432773 0.285184 0.029766 0.017442 0.849054 0.000121 0.133383 0.000126 0.992782 0.006966 0.000126 0.053528 0.053996 0.026393 0.866083 0.594629 0.003540 0.369067 0.032764 Consensus sequence: AGCGCCVCCTR Reverse complement motif 0.032764 0.003540 0.369067 0.594629 0.866083 0.053996 0.026393 0.053528 0.000126 0.006966 0.992782 0.000126 0.017442 0.000121 0.849054 0.133383 0.252276 0.285184 0.432773 0.029766 0.001545 0.000121 0.996789 0.001545 0.186842 0.000121 0.806066 0.006971 0.000126 0.985664 0.000121 0.014089 0.000126 0.000121 0.975671 0.024082 0.029083 0.921401 0.040478 0.009038 0.023743 0.020895 0.082216 0.873146 Consensus sequence: KAGGVGGCGCT ******************************************************************* Best Matches for Significant Motif ID 3 (Highest to Lowest) ******************************************************************* Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 2 Motif 2 Original Motif Original Motif Forward 1 11 0.000000 Original motif 0.873146 0.020895 0.082216 0.023743 0.029083 0.040478 0.921401 0.009038 0.000126 0.975671 0.000121 0.024082 0.000126 0.000121 0.985664 0.014089 0.186842 0.806066 0.000121 0.006971 0.001545 0.996789 0.000121 0.001545 0.252276 0.432773 0.285184 0.029766 0.017442 0.849054 0.000121 0.133383 0.000126 0.992782 0.006966 0.000126 0.053528 0.053996 0.026393 0.866083 0.594629 0.003540 0.369067 0.032764 Consensus sequence: AGCGCCVCCTR Reverse complement motif 0.032764 0.003540 0.369067 0.594629 0.866083 0.053996 0.026393 0.053528 0.000126 0.006966 0.992782 0.000126 0.017442 0.000121 0.849054 0.133383 0.252276 0.285184 0.432773 0.029766 0.001545 0.000121 0.996789 0.001545 0.186842 0.000121 0.806066 0.006971 0.000126 0.985664 0.000121 0.014089 0.000126 0.000121 0.975671 0.024082 0.029083 0.921401 0.040478 0.009038 0.023743 0.020895 0.082216 0.873146 Consensus sequence: KAGGVGGCGCT Alignment: AGCGCCVCCTR AGCGCCVCCTR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 1 Motif 1 Original Motif Original Motif Backward 1 11 0.120204 Original motif 0.898388 0.000066 0.014852 0.086694 0.000087 0.000066 0.993423 0.006424 0.810905 0.069774 0.119234 0.000087 0.000087 0.006403 0.286115 0.707395 0.000087 0.000066 0.999760 0.000087 0.012761 0.000066 0.987086 0.000087 0.017861 0.967200 0.012740 0.002199 0.004312 0.000066 0.995535 0.000087 0.057121 0.794854 0.080336 0.067689 0.106584 0.084561 0.012740 0.796115 0.587349 0.239281 0.143710 0.029660 0.107819 0.044426 0.190185 0.657570 0.414124 0.052881 0.082449 0.450545 0.217310 0.385406 0.158496 0.238788 0.365178 0.427653 0.097238 0.109931 Consensus sequence: AGATGGCGCTATWHM Reverse complement motif 0.365178 0.097238 0.427653 0.109931 0.217310 0.158496 0.385406 0.238788 0.450545 0.052881 0.082449 0.414124 0.657570 0.044426 0.190185 0.107819 0.029660 0.239281 0.143710 0.587349 0.796115 0.084561 0.012740 0.106584 0.057121 0.080336 0.794854 0.067689 0.004312 0.995535 0.000066 0.000087 0.017861 0.012740 0.967200 0.002199 0.012761 0.987086 0.000066 0.000087 0.000087 0.999760 0.000066 0.000087 0.707395 0.006403 0.286115 0.000087 0.000087 0.069774 0.119234 0.810905 0.000087 0.993423 0.000066 0.006424 0.086694 0.000066 0.014852 0.898388 Consensus sequence: RDWATAGCGCCATCT Alignment: AGATGGCGCTATWHM ----AGCGCCVCCTR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 1 Motif name: Motif 1 Original motif 0.898388 0.000066 0.014852 0.086694 0.000087 0.000066 0.993423 0.006424 0.810905 0.069774 0.119234 0.000087 0.000087 0.006403 0.286115 0.707395 0.000087 0.000066 0.999760 0.000087 0.012761 0.000066 0.987086 0.000087 0.017861 0.967200 0.012740 0.002199 0.004312 0.000066 0.995535 0.000087 0.057121 0.794854 0.080336 0.067689 0.106584 0.084561 0.012740 0.796115 0.587349 0.239281 0.143710 0.029660 0.107819 0.044426 0.190185 0.657570 0.414124 0.052881 0.082449 0.450545 0.217310 0.385406 0.158496 0.238788 0.365178 0.427653 0.097238 0.109931 Consensus sequence: AGATGGCGCTATWHM Reverse complement motif 0.365178 0.097238 0.427653 0.109931 0.217310 0.158496 0.385406 0.238788 0.450545 0.052881 0.082449 0.414124 0.657570 0.044426 0.190185 0.107819 0.029660 0.239281 0.143710 0.587349 0.796115 0.084561 0.012740 0.106584 0.057121 0.080336 0.794854 0.067689 0.004312 0.995535 0.000066 0.000087 0.017861 0.012740 0.967200 0.002199 0.012761 0.987086 0.000066 0.000087 0.000087 0.999760 0.000066 0.000087 0.707395 0.006403 0.286115 0.000087 0.000087 0.069774 0.119234 0.810905 0.000087 0.993423 0.000066 0.006424 0.086694 0.000066 0.014852 0.898388 Consensus sequence: RDWATAGCGCCATCT ******************************************************************* Best Matches for Significant Motif ID 1 (Highest to Lowest) ******************************************************************* Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 2 Motif 2 Original Motif Original Motif Backward 1 11 0.074290 Original motif 0.873146 0.020895 0.082216 0.023743 0.029083 0.040478 0.921401 0.009038 0.000126 0.975671 0.000121 0.024082 0.000126 0.000121 0.985664 0.014089 0.186842 0.806066 0.000121 0.006971 0.001545 0.996789 0.000121 0.001545 0.252276 0.432773 0.285184 0.029766 0.017442 0.849054 0.000121 0.133383 0.000126 0.992782 0.006966 0.000126 0.053528 0.053996 0.026393 0.866083 0.594629 0.003540 0.369067 0.032764 Consensus sequence: AGCGCCVCCTR Reverse complement motif 0.032764 0.003540 0.369067 0.594629 0.866083 0.053996 0.026393 0.053528 0.000126 0.006966 0.992782 0.000126 0.017442 0.000121 0.849054 0.133383 0.252276 0.285184 0.432773 0.029766 0.001545 0.000121 0.996789 0.001545 0.186842 0.000121 0.806066 0.006971 0.000126 0.985664 0.000121 0.014089 0.000126 0.000121 0.975671 0.024082 0.029083 0.921401 0.040478 0.009038 0.023743 0.020895 0.082216 0.873146 Consensus sequence: KAGGVGGCGCT Alignment: ----AGCGCCVCCTR AGATGGCGCTATWHM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 3 Motif 3 Original Motif Original Motif Backward 1 11 0.074290 Original motif 0.873146 0.020895 0.082216 0.023743 0.029083 0.040478 0.921401 0.009038 0.000126 0.975671 0.000121 0.024082 0.000126 0.000121 0.985664 0.014089 0.186842 0.806066 0.000121 0.006971 0.001545 0.996789 0.000121 0.001545 0.252276 0.432773 0.285184 0.029766 0.017442 0.849054 0.000121 0.133383 0.000126 0.992782 0.006966 0.000126 0.053528 0.053996 0.026393 0.866083 0.594629 0.003540 0.369067 0.032764 Consensus sequence: AGCGCCVCCTR Reverse complement motif 0.032764 0.003540 0.369067 0.594629 0.866083 0.053996 0.026393 0.053528 0.000126 0.006966 0.992782 0.000126 0.017442 0.000121 0.849054 0.133383 0.252276 0.285184 0.432773 0.029766 0.001545 0.000121 0.996789 0.001545 0.186842 0.000121 0.806066 0.006971 0.000126 0.985664 0.000121 0.014089 0.000126 0.000121 0.975671 0.024082 0.029083 0.921401 0.040478 0.009038 0.023743 0.020895 0.082216 0.873146 Consensus sequence: KAGGVGGCGCT Alignment: ----AGCGCCVCCTR AGATGGCGCTATWHM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- **************************************************************************************************************************************************************************************************** ********************************************************************** Best Matches for Each Motif (Highest to Lowest) ***************************************************************************** Dataset #: 1 Motif ID: 1 Motif name: Motif 1 Original motif 0.898388 0.000066 0.014852 0.086694 0.000087 0.000066 0.993423 0.006424 0.810905 0.069774 0.119234 0.000087 0.000087 0.006403 0.286115 0.707395 0.000087 0.000066 0.999760 0.000087 0.012761 0.000066 0.987086 0.000087 0.017861 0.967200 0.012740 0.002199 0.004312 0.000066 0.995535 0.000087 0.057121 0.794854 0.080336 0.067689 0.106584 0.084561 0.012740 0.796115 0.587349 0.239281 0.143710 0.029660 0.107819 0.044426 0.190185 0.657570 0.414124 0.052881 0.082449 0.450545 0.217310 0.385406 0.158496 0.238788 0.365178 0.427653 0.097238 0.109931 Consensus sequence: AGATGGCGCTATWHM Reserve complement motif 0.365178 0.097238 0.427653 0.109931 0.217310 0.158496 0.385406 0.238788 0.450545 0.052881 0.082449 0.414124 0.657570 0.044426 0.190185 0.107819 0.029660 0.239281 0.143710 0.587349 0.796115 0.084561 0.012740 0.106584 0.057121 0.080336 0.794854 0.067689 0.004312 0.995535 0.000066 0.000087 0.017861 0.012740 0.967200 0.002199 0.012761 0.987086 0.000066 0.000087 0.000087 0.999760 0.000066 0.000087 0.707395 0.006403 0.286115 0.000087 0.000087 0.069774 0.119234 0.810905 0.000087 0.993423 0.000066 0.006424 0.086694 0.000066 0.014852 0.898388 Consensus sequence: RDWATAGCGCCATCT ************************************************************************ Best Matches for Motif ID 1 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 2 Motif 2 Original Motif Original Motif Backward 1 11 0.074290 Original motif 0.873146 0.020895 0.082216 0.023743 0.029083 0.040478 0.921401 0.009038 0.000126 0.975671 0.000121 0.024082 0.000126 0.000121 0.985664 0.014089 0.186842 0.806066 0.000121 0.006971 0.001545 0.996789 0.000121 0.001545 0.252276 0.432773 0.285184 0.029766 0.017442 0.849054 0.000121 0.133383 0.000126 0.992782 0.006966 0.000126 0.053528 0.053996 0.026393 0.866083 0.594629 0.003540 0.369067 0.032764 Consensus sequence: AGCGCCVCCTR Reverse complement motif 0.032764 0.003540 0.369067 0.594629 0.866083 0.053996 0.026393 0.053528 0.000126 0.006966 0.992782 0.000126 0.017442 0.000121 0.849054 0.133383 0.252276 0.285184 0.432773 0.029766 0.001545 0.000121 0.996789 0.001545 0.186842 0.000121 0.806066 0.006971 0.000126 0.985664 0.000121 0.014089 0.000126 0.000121 0.975671 0.024082 0.029083 0.921401 0.040478 0.009038 0.023743 0.020895 0.082216 0.873146 Consensus sequence: KAGGVGGCGCT Alignment: ----AGCGCCVCCTR AGATGGCGCTATWHM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 3 Motif 3 Original Motif Original Motif Backward 1 11 0.074290 Original motif 0.873146 0.020895 0.082216 0.023743 0.029083 0.040478 0.921401 0.009038 0.000126 0.975671 0.000121 0.024082 0.000126 0.000121 0.985664 0.014089 0.186842 0.806066 0.000121 0.006971 0.001545 0.996789 0.000121 0.001545 0.252276 0.432773 0.285184 0.029766 0.017442 0.849054 0.000121 0.133383 0.000126 0.992782 0.006966 0.000126 0.053528 0.053996 0.026393 0.866083 0.594629 0.003540 0.369067 0.032764 Consensus sequence: AGCGCCVCCTR Reverse complement motif 0.032764 0.003540 0.369067 0.594629 0.866083 0.053996 0.026393 0.053528 0.000126 0.006966 0.992782 0.000126 0.017442 0.000121 0.849054 0.133383 0.252276 0.285184 0.432773 0.029766 0.001545 0.000121 0.996789 0.001545 0.186842 0.000121 0.806066 0.006971 0.000126 0.985664 0.000121 0.014089 0.000126 0.000121 0.975671 0.024082 0.029083 0.921401 0.040478 0.009038 0.023743 0.020895 0.082216 0.873146 Consensus sequence: KAGGVGGCGCT Alignment: ----AGCGCCVCCTR AGATGGCGCTATWHM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 2 Motif name: Motif 2 Original motif 0.873146 0.020895 0.082216 0.023743 0.029083 0.040478 0.921401 0.009038 0.000126 0.975671 0.000121 0.024082 0.000126 0.000121 0.985664 0.014089 0.186842 0.806066 0.000121 0.006971 0.001545 0.996789 0.000121 0.001545 0.252276 0.432773 0.285184 0.029766 0.017442 0.849054 0.000121 0.133383 0.000126 0.992782 0.006966 0.000126 0.053528 0.053996 0.026393 0.866083 0.594629 0.003540 0.369067 0.032764 Consensus sequence: AGCGCCVCCTR Reserve complement motif 0.032764 0.003540 0.369067 0.594629 0.866083 0.053996 0.026393 0.053528 0.000126 0.006966 0.992782 0.000126 0.017442 0.000121 0.849054 0.133383 0.252276 0.285184 0.432773 0.029766 0.001545 0.000121 0.996789 0.001545 0.186842 0.000121 0.806066 0.006971 0.000126 0.985664 0.000121 0.014089 0.000126 0.000121 0.975671 0.024082 0.029083 0.921401 0.040478 0.009038 0.023743 0.020895 0.082216 0.873146 Consensus sequence: KAGGVGGCGCT ************************************************************************ Best Matches for Motif ID 2 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 3 Motif 3 Original Motif Original Motif Forward 1 11 0.000000 Original motif 0.873146 0.020895 0.082216 0.023743 0.029083 0.040478 0.921401 0.009038 0.000126 0.975671 0.000121 0.024082 0.000126 0.000121 0.985664 0.014089 0.186842 0.806066 0.000121 0.006971 0.001545 0.996789 0.000121 0.001545 0.252276 0.432773 0.285184 0.029766 0.017442 0.849054 0.000121 0.133383 0.000126 0.992782 0.006966 0.000126 0.053528 0.053996 0.026393 0.866083 0.594629 0.003540 0.369067 0.032764 Consensus sequence: AGCGCCVCCTR Reverse complement motif 0.032764 0.003540 0.369067 0.594629 0.866083 0.053996 0.026393 0.053528 0.000126 0.006966 0.992782 0.000126 0.017442 0.000121 0.849054 0.133383 0.252276 0.285184 0.432773 0.029766 0.001545 0.000121 0.996789 0.001545 0.186842 0.000121 0.806066 0.006971 0.000126 0.985664 0.000121 0.014089 0.000126 0.000121 0.975671 0.024082 0.029083 0.921401 0.040478 0.009038 0.023743 0.020895 0.082216 0.873146 Consensus sequence: KAGGVGGCGCT Alignment: AGCGCCVCCTR AGCGCCVCCTR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 1 Motif 1 Original Motif Original Motif Backward 1 11 0.120204 Original motif 0.898388 0.000066 0.014852 0.086694 0.000087 0.000066 0.993423 0.006424 0.810905 0.069774 0.119234 0.000087 0.000087 0.006403 0.286115 0.707395 0.000087 0.000066 0.999760 0.000087 0.012761 0.000066 0.987086 0.000087 0.017861 0.967200 0.012740 0.002199 0.004312 0.000066 0.995535 0.000087 0.057121 0.794854 0.080336 0.067689 0.106584 0.084561 0.012740 0.796115 0.587349 0.239281 0.143710 0.029660 0.107819 0.044426 0.190185 0.657570 0.414124 0.052881 0.082449 0.450545 0.217310 0.385406 0.158496 0.238788 0.365178 0.427653 0.097238 0.109931 Consensus sequence: AGATGGCGCTATWHM Reverse complement motif 0.365178 0.097238 0.427653 0.109931 0.217310 0.158496 0.385406 0.238788 0.450545 0.052881 0.082449 0.414124 0.657570 0.044426 0.190185 0.107819 0.029660 0.239281 0.143710 0.587349 0.796115 0.084561 0.012740 0.106584 0.057121 0.080336 0.794854 0.067689 0.004312 0.995535 0.000066 0.000087 0.017861 0.012740 0.967200 0.002199 0.012761 0.987086 0.000066 0.000087 0.000087 0.999760 0.000066 0.000087 0.707395 0.006403 0.286115 0.000087 0.000087 0.069774 0.119234 0.810905 0.000087 0.993423 0.000066 0.006424 0.086694 0.000066 0.014852 0.898388 Consensus sequence: RDWATAGCGCCATCT Alignment: AGATGGCGCTATWHM ----AGCGCCVCCTR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 3 Motif name: Motif 3 Original motif 0.873146 0.020895 0.082216 0.023743 0.029083 0.040478 0.921401 0.009038 0.000126 0.975671 0.000121 0.024082 0.000126 0.000121 0.985664 0.014089 0.186842 0.806066 0.000121 0.006971 0.001545 0.996789 0.000121 0.001545 0.252276 0.432773 0.285184 0.029766 0.017442 0.849054 0.000121 0.133383 0.000126 0.992782 0.006966 0.000126 0.053528 0.053996 0.026393 0.866083 0.594629 0.003540 0.369067 0.032764 Consensus sequence: AGCGCCVCCTR Reserve complement motif 0.032764 0.003540 0.369067 0.594629 0.866083 0.053996 0.026393 0.053528 0.000126 0.006966 0.992782 0.000126 0.017442 0.000121 0.849054 0.133383 0.252276 0.285184 0.432773 0.029766 0.001545 0.000121 0.996789 0.001545 0.186842 0.000121 0.806066 0.006971 0.000126 0.985664 0.000121 0.014089 0.000126 0.000121 0.975671 0.024082 0.029083 0.921401 0.040478 0.009038 0.023743 0.020895 0.082216 0.873146 Consensus sequence: KAGGVGGCGCT ************************************************************************ Best Matches for Motif ID 3 (Highest to Lowest) ************************************************************************ Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 2 Motif 2 Original Motif Original Motif Forward 1 11 0.000000 Original motif 0.873146 0.020895 0.082216 0.023743 0.029083 0.040478 0.921401 0.009038 0.000126 0.975671 0.000121 0.024082 0.000126 0.000121 0.985664 0.014089 0.186842 0.806066 0.000121 0.006971 0.001545 0.996789 0.000121 0.001545 0.252276 0.432773 0.285184 0.029766 0.017442 0.849054 0.000121 0.133383 0.000126 0.992782 0.006966 0.000126 0.053528 0.053996 0.026393 0.866083 0.594629 0.003540 0.369067 0.032764 Consensus sequence: AGCGCCVCCTR Reverse complement motif 0.032764 0.003540 0.369067 0.594629 0.866083 0.053996 0.026393 0.053528 0.000126 0.006966 0.992782 0.000126 0.017442 0.000121 0.849054 0.133383 0.252276 0.285184 0.432773 0.029766 0.001545 0.000121 0.996789 0.001545 0.186842 0.000121 0.806066 0.006971 0.000126 0.985664 0.000121 0.014089 0.000126 0.000121 0.975671 0.024082 0.029083 0.921401 0.040478 0.009038 0.023743 0.020895 0.082216 0.873146 Consensus sequence: KAGGVGGCGCT Alignment: AGCGCCVCCTR AGCGCCVCCTR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 1 Motif 1 Original Motif Original Motif Backward 1 11 0.120204 Original motif 0.898388 0.000066 0.014852 0.086694 0.000087 0.000066 0.993423 0.006424 0.810905 0.069774 0.119234 0.000087 0.000087 0.006403 0.286115 0.707395 0.000087 0.000066 0.999760 0.000087 0.012761 0.000066 0.987086 0.000087 0.017861 0.967200 0.012740 0.002199 0.004312 0.000066 0.995535 0.000087 0.057121 0.794854 0.080336 0.067689 0.106584 0.084561 0.012740 0.796115 0.587349 0.239281 0.143710 0.029660 0.107819 0.044426 0.190185 0.657570 0.414124 0.052881 0.082449 0.450545 0.217310 0.385406 0.158496 0.238788 0.365178 0.427653 0.097238 0.109931 Consensus sequence: AGATGGCGCTATWHM Reverse complement motif 0.365178 0.097238 0.427653 0.109931 0.217310 0.158496 0.385406 0.238788 0.450545 0.052881 0.082449 0.414124 0.657570 0.044426 0.190185 0.107819 0.029660 0.239281 0.143710 0.587349 0.796115 0.084561 0.012740 0.106584 0.057121 0.080336 0.794854 0.067689 0.004312 0.995535 0.000066 0.000087 0.017861 0.012740 0.967200 0.002199 0.012761 0.987086 0.000066 0.000087 0.000087 0.999760 0.000066 0.000087 0.707395 0.006403 0.286115 0.000087 0.000087 0.069774 0.119234 0.810905 0.000087 0.993423 0.000066 0.006424 0.086694 0.000066 0.014852 0.898388 Consensus sequence: RDWATAGCGCCATCT Alignment: AGATGGCGCTATWHM ----AGCGCCVCCTR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Results created by MOTIFSIM on 04-19-2024 14:13:07 Runtime: 532.394452 seconds MOTIFSIM is written by Ngoc Tam L. 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