**************************************************************************************************************************************************************************************************** MOTIFSIM - Motif Similarity Detection Tool Version 2.2 **************************************************************************************************************************************************************************************************** INPUT **************************************************************************************************************************************************************************************************** Input Parameters Number of files: 1 Number of top significant motifs: 4 Number of best matches: 4 Similarity cutoff: >= 0.5 Matching motif database: Jaspar Core Motif tree: Yes Combined similar motifs: No Output file type: All Output file format: All Input files and motif counts File name Count of motifs Dataset # U20240419_R_04-19-24_1712_InsertFile1.txt 3 1 **************************************************************************************************************************************************************************************************** RESULTS **************************************************************************************************************************************************************************************************** ********************************************************************** Best Matches in Database for Each Motif (Highest to Lowest) ***************************************************************** Dataset #: 1 Motif ID: 1 Motif name: Motif 1 Original motif 0.898388 0.000066 0.014852 0.086694 0.000087 0.000066 0.993423 0.006424 0.810905 0.069774 0.119234 0.000087 0.000087 0.006403 0.286115 0.707395 0.000087 0.000066 0.999760 0.000087 0.012761 0.000066 0.987086 0.000087 0.017861 0.967200 0.012740 0.002199 0.004312 0.000066 0.995535 0.000087 0.057121 0.794854 0.080336 0.067689 0.106584 0.084561 0.012740 0.796115 0.587349 0.239281 0.143710 0.029660 0.107819 0.044426 0.190185 0.657570 0.414124 0.052881 0.082449 0.450545 0.217310 0.385406 0.158496 0.238788 0.365178 0.427653 0.097238 0.109931 Consensus sequence: AGATGGCGCTATWHM Reserve complement motif 0.365178 0.097238 0.427653 0.109931 0.217310 0.158496 0.385406 0.238788 0.450545 0.052881 0.082449 0.414124 0.657570 0.044426 0.190185 0.107819 0.029660 0.239281 0.143710 0.587349 0.796115 0.084561 0.012740 0.106584 0.057121 0.080336 0.794854 0.067689 0.004312 0.995535 0.000066 0.000087 0.017861 0.012740 0.967200 0.002199 0.012761 0.987086 0.000066 0.000087 0.000087 0.999760 0.000066 0.000087 0.707395 0.006403 0.286115 0.000087 0.000087 0.069774 0.119234 0.810905 0.000087 0.993423 0.000066 0.006424 0.086694 0.000066 0.014852 0.898388 Consensus sequence: RDWATAGCGCCATCT ************************************************************************ Best Matches for Motif ID 1 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0469.2 E2F3 Reverse Complement Reverse Complement Backward 3 15 0.038099 Taxon: Vertebrates Original motif 0.518561 0.107576 0.222727 0.151136 0.747660 0.017941 0.220359 0.014041 0.899143 0.000000 0.005308 0.095549 0.926193 0.000000 0.000000 0.073807 0.811695 0.000000 0.016918 0.171387 0.177118 0.000000 0.347774 0.475108 0.011875 0.116514 0.842707 0.028904 0.000000 0.000774 0.999226 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000752 0.999248 0.000000 0.000000 1.000000 0.000000 0.000000 0.031351 0.779250 0.177763 0.011635 0.650804 0.209968 0.000000 0.139228 0.361032 0.007742 0.005677 0.625548 0.270813 0.002478 0.002973 0.723736 0.131706 0.007233 0.004219 0.856841 0.025526 0.147982 0.043808 0.782684 0.100420 0.249125 0.124213 0.526242 Consensus sequence: AAAAAKGGCGCCAWTTTT Reverse complement motif 0.526242 0.249125 0.124213 0.100420 0.782684 0.147982 0.043808 0.025526 0.856841 0.007233 0.004219 0.131706 0.723736 0.002478 0.002973 0.270813 0.625548 0.007742 0.005677 0.361032 0.139228 0.209968 0.000000 0.650804 0.031351 0.177763 0.779250 0.011635 0.000000 0.000000 1.000000 0.000000 0.000000 0.999248 0.000752 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.999226 0.000774 0.000000 0.011875 0.842707 0.116514 0.028904 0.475108 0.000000 0.347774 0.177118 0.171387 0.000000 0.016918 0.811695 0.073807 0.000000 0.000000 0.926193 0.095549 0.000000 0.005308 0.899143 0.014041 0.017941 0.220359 0.747660 0.151136 0.107576 0.222727 0.518561 Consensus sequence: AAAAWTGGCGCCRTTTTT Alignment: AAAAWTGGCGCCRTTTTT -RDWATAGCGCCATCT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0864.1 E2F2 Reverse Complement Reverse Complement Forward 1 15 0.045813 Taxon: Vertebrates Original motif 0.930233 0.000000 0.000000 0.069767 0.953488 0.000000 0.000000 0.046512 0.976190 0.000000 0.000000 0.023810 0.666667 0.019608 0.058824 0.254902 0.236111 0.013889 0.111111 0.638889 0.000000 0.078947 0.894737 0.026316 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.911765 0.088235 0.000000 0.765957 0.063830 0.000000 0.170213 0.306452 0.016129 0.000000 0.677419 0.150000 0.000000 0.000000 0.850000 0.018868 0.000000 0.000000 0.981132 0.180000 0.060000 0.020000 0.740000 Consensus sequence: AAAATGGCGCCATTTT Reverse complement motif 0.740000 0.060000 0.020000 0.180000 0.981132 0.000000 0.000000 0.018868 0.850000 0.000000 0.000000 0.150000 0.677419 0.016129 0.000000 0.306452 0.170213 0.063830 0.000000 0.765957 0.000000 0.088235 0.911765 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.894737 0.078947 0.026316 0.638889 0.013889 0.111111 0.236111 0.254902 0.019608 0.058824 0.666667 0.023810 0.000000 0.000000 0.976190 0.046512 0.000000 0.000000 0.953488 0.069767 0.000000 0.000000 0.930233 Consensus sequence: AAAATGGCGCCATTTT Alignment: AAAATGGCGCCATTTT RDWATAGCGCCATCT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0395.1 STP2 Reverse Complement Original Motif Backward 6 15 0.055702 Taxon: Fungi Original motif 0.180361 0.258517 0.175351 0.385772 0.288867 0.242728 0.293882 0.174524 0.438438 0.193193 0.211211 0.157157 0.276830 0.209629 0.176530 0.337011 0.126126 0.405405 0.143143 0.325325 0.238716 0.111334 0.568706 0.081244 0.113226 0.011022 0.830661 0.045090 0.034068 0.648297 0.005010 0.312625 0.002004 0.005010 0.988978 0.004008 0.000000 0.850701 0.148297 0.001002 0.001002 0.867735 0.128257 0.003006 0.008016 0.013026 0.949900 0.029058 0.014028 0.521042 0.004008 0.460922 0.619238 0.012024 0.338677 0.030060 0.086086 0.433433 0.139139 0.341341 0.218437 0.312625 0.359719 0.109218 0.326653 0.240481 0.205411 0.227455 0.231463 0.427856 0.161323 0.179359 0.158317 0.237475 0.344689 0.259519 0.343029 0.265797 0.122367 0.268806 Consensus sequence: HVVHBGGCGCCGYRYVHHBH Reverse complement motif 0.268806 0.265797 0.122367 0.343029 0.158317 0.344689 0.237475 0.259519 0.231463 0.161323 0.427856 0.179359 0.227455 0.240481 0.205411 0.326653 0.218437 0.359719 0.312625 0.109218 0.086086 0.139139 0.433433 0.341341 0.030060 0.012024 0.338677 0.619238 0.014028 0.004008 0.521042 0.460922 0.008016 0.949900 0.013026 0.029058 0.001002 0.128257 0.867735 0.003006 0.000000 0.148297 0.850701 0.001002 0.002004 0.988978 0.005010 0.004008 0.034068 0.005010 0.648297 0.312625 0.113226 0.830661 0.011022 0.045090 0.238716 0.568706 0.111334 0.081244 0.126126 0.143143 0.405405 0.325325 0.337011 0.209629 0.176530 0.276830 0.157157 0.193193 0.211211 0.438438 0.288867 0.293882 0.242728 0.174524 0.385772 0.258517 0.175351 0.180361 Consensus sequence: HBDHVKKKCGGCGCCBHBVH Alignment: HVVHBGGCGCCGYRYVHHBH RDWATAGCGCCATCT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0269.1 AFT1 Original Motif Reverse Complement Forward 4 15 0.058063 Taxon: Fungi Original motif 0.106212 0.205411 0.231463 0.456914 0.155311 0.249499 0.220441 0.374749 0.362725 0.197395 0.221443 0.218437 0.179539 0.397192 0.222668 0.200602 0.426854 0.231463 0.154309 0.187375 0.136409 0.078235 0.142427 0.642929 0.717435 0.025050 0.031062 0.226453 0.145145 0.031031 0.288288 0.535536 0.034068 0.047094 0.039078 0.879760 0.160321 0.010020 0.813627 0.016032 0.010030 0.968907 0.011033 0.010030 0.961962 0.009009 0.015015 0.014014 0.008008 0.972973 0.009009 0.010010 0.025050 0.956914 0.002004 0.016032 0.019057 0.742227 0.013039 0.225677 0.181545 0.257773 0.495486 0.065196 0.265531 0.252505 0.241483 0.240481 0.287575 0.155311 0.183367 0.373747 0.276553 0.180361 0.068136 0.474950 0.123370 0.225677 0.358074 0.292879 0.154309 0.236473 0.458918 0.150301 Consensus sequence: BBDBHTAKTGCACCCSVDWBV Reverse complement motif 0.154309 0.458918 0.236473 0.150301 0.123370 0.358074 0.225677 0.292879 0.474950 0.180361 0.068136 0.276553 0.373747 0.155311 0.183367 0.287575 0.240481 0.252505 0.241483 0.265531 0.181545 0.495486 0.257773 0.065196 0.019057 0.013039 0.742227 0.225677 0.025050 0.002004 0.956914 0.016032 0.008008 0.009009 0.972973 0.010010 0.014014 0.009009 0.015015 0.961962 0.010030 0.011033 0.968907 0.010030 0.160321 0.813627 0.010020 0.016032 0.879760 0.047094 0.039078 0.034068 0.535536 0.031031 0.288288 0.145145 0.226453 0.025050 0.031062 0.717435 0.642929 0.078235 0.142427 0.136409 0.187375 0.231463 0.154309 0.426854 0.179539 0.222668 0.397192 0.200602 0.218437 0.197395 0.221443 0.362725 0.374749 0.249499 0.220441 0.155311 0.456914 0.205411 0.231463 0.106212 Consensus sequence: VBWDBSGGGTGCARTAHBDVV Alignment: VBWDBSGGGTGCARTAHBDVV ---AGATGGCGCTATWHM--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 2 Motif name: Motif 2 Original motif 0.873146 0.020895 0.082216 0.023743 0.029083 0.040478 0.921401 0.009038 0.000126 0.975671 0.000121 0.024082 0.000126 0.000121 0.985664 0.014089 0.186842 0.806066 0.000121 0.006971 0.001545 0.996789 0.000121 0.001545 0.252276 0.432773 0.285184 0.029766 0.017442 0.849054 0.000121 0.133383 0.000126 0.992782 0.006966 0.000126 0.053528 0.053996 0.026393 0.866083 0.594629 0.003540 0.369067 0.032764 Consensus sequence: AGCGCCVCCTR Reserve complement motif 0.032764 0.003540 0.369067 0.594629 0.866083 0.053996 0.026393 0.053528 0.000126 0.006966 0.992782 0.000126 0.017442 0.000121 0.849054 0.133383 0.252276 0.285184 0.432773 0.029766 0.001545 0.000121 0.996789 0.001545 0.186842 0.000121 0.806066 0.006971 0.000126 0.985664 0.000121 0.014089 0.000126 0.000121 0.975671 0.024082 0.029083 0.921401 0.040478 0.009038 0.023743 0.020895 0.082216 0.873146 Consensus sequence: KAGGVGGCGCT ************************************************************************ Best Matches for Motif ID 2 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0139.1 CTCF Original Motif Reverse Complement Forward 2 11 0.037154 Taxon: Vertebrates Original motif 0.095290 0.318729 0.083242 0.502738 0.182913 0.158817 0.453450 0.204819 0.307777 0.053669 0.491785 0.146769 0.061336 0.876232 0.023001 0.039430 0.008762 0.989047 0.000000 0.002191 0.814896 0.014239 0.071194 0.099671 0.043812 0.578313 0.365827 0.012048 0.117325 0.474781 0.052632 0.355263 0.933114 0.012061 0.035088 0.019737 0.005488 0.000000 0.991218 0.003293 0.365532 0.003293 0.621295 0.009879 0.059276 0.013172 0.553238 0.374314 0.013187 0.000000 0.978022 0.008791 0.061538 0.008791 0.851648 0.078022 0.114411 0.806381 0.005501 0.073707 0.409241 0.014301 0.557756 0.018702 0.090308 0.530837 0.338106 0.040749 0.128855 0.354626 0.080396 0.436123 0.442731 0.199339 0.292952 0.064978 Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif 0.064978 0.199339 0.292952 0.442731 0.436123 0.354626 0.080396 0.128855 0.090308 0.338106 0.530837 0.040749 0.409241 0.557756 0.014301 0.018702 0.114411 0.005501 0.806381 0.073707 0.061538 0.851648 0.008791 0.078022 0.013187 0.978022 0.000000 0.008791 0.059276 0.553238 0.013172 0.374314 0.365532 0.621295 0.003293 0.009879 0.005488 0.991218 0.000000 0.003293 0.019737 0.012061 0.035088 0.933114 0.117325 0.052632 0.474781 0.355263 0.043812 0.365827 0.578313 0.012048 0.099671 0.014239 0.071194 0.814896 0.008762 0.000000 0.989047 0.002191 0.061336 0.023001 0.876232 0.039430 0.307777 0.491785 0.053669 0.146769 0.182913 0.453450 0.158817 0.204819 0.502738 0.318729 0.083242 0.095290 Consensus sequence: BMSMGCCYMCTKSTGGMHM Alignment: BMSMGCCYMCTKSTGGMHM -AGCGCCVCCTR------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0685.1 SP4 Reverse Complement Reverse Complement Backward 6 11 0.062332 Taxon: Vertebrates Original motif 0.138895 0.314247 0.184075 0.362782 0.517012 0.037116 0.015465 0.430407 0.567190 0.031850 0.357548 0.043412 0.163731 0.001046 0.832432 0.002790 0.055237 0.943913 0.000000 0.000850 0.000432 0.969357 0.001079 0.029132 0.751376 0.247874 0.000750 0.000000 0.000429 0.999571 0.000000 0.000000 0.001811 0.002535 0.985696 0.009958 0.000427 0.998720 0.000853 0.000000 0.000633 0.998944 0.000422 0.000000 0.000000 0.984184 0.000633 0.015183 0.423378 0.559135 0.002071 0.015416 0.020632 0.780719 0.003834 0.194815 0.214528 0.168799 0.044035 0.572638 0.137621 0.285174 0.085836 0.491369 0.229582 0.280152 0.132004 0.358262 Consensus sequence: BWRGCCACGCCCMCTYH Reverse complement motif 0.358262 0.280152 0.132004 0.229582 0.491369 0.285174 0.085836 0.137621 0.572638 0.168799 0.044035 0.214528 0.020632 0.003834 0.780719 0.194815 0.423378 0.002071 0.559135 0.015416 0.000000 0.000633 0.984184 0.015183 0.000633 0.000422 0.998944 0.000000 0.000427 0.000853 0.998720 0.000000 0.001811 0.985696 0.002535 0.009958 0.000429 0.000000 0.999571 0.000000 0.000000 0.247874 0.000750 0.751376 0.000432 0.001079 0.969357 0.029132 0.055237 0.000000 0.943913 0.000850 0.163731 0.832432 0.001046 0.002790 0.043412 0.031850 0.357548 0.567190 0.430407 0.037116 0.015465 0.517012 0.362782 0.314247 0.184075 0.138895 Consensus sequence: HMAGRGGGCGTGGCKWV Alignment: HMAGRGGGCGTGGCKWV -KAGGVGGCGCT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0516.1 SP2 Reverse Complement Reverse Complement Forward 3 11 0.063762 Taxon: Vertebrates Original motif 0.094899 0.150059 0.609727 0.145314 0.023132 0.481020 0.152432 0.343416 0.030842 0.822064 0.000593 0.146501 0.000000 0.995848 0.004152 0.000000 0.000000 0.974496 0.000000 0.025504 0.103203 0.000000 0.759193 0.137604 0.000000 1.000000 0.000000 0.000000 0.000000 0.982206 0.000000 0.017794 0.000000 0.657177 0.000000 0.342823 0.122183 0.709371 0.000000 0.168446 0.068209 0.575919 0.058719 0.297153 0.110913 0.328588 0.192764 0.367734 0.134045 0.425267 0.237841 0.202847 0.135231 0.470937 0.241993 0.151839 0.120403 0.441874 0.250297 0.187426 Consensus sequence: GYCCCGCCYCYBBBB Reverse complement motif 0.120403 0.250297 0.441874 0.187426 0.135231 0.241993 0.470937 0.151839 0.134045 0.237841 0.425267 0.202847 0.367734 0.328588 0.192764 0.110913 0.068209 0.058719 0.575919 0.297153 0.122183 0.000000 0.709371 0.168446 0.000000 0.000000 0.657177 0.342823 0.000000 0.000000 0.982206 0.017794 0.000000 0.000000 1.000000 0.000000 0.103203 0.759193 0.000000 0.137604 0.000000 0.000000 0.974496 0.025504 0.000000 0.004152 0.995848 0.000000 0.030842 0.000593 0.822064 0.146501 0.023132 0.152432 0.481020 0.343416 0.094899 0.609727 0.150059 0.145314 Consensus sequence: BBBVKGKGGCGGGKC Alignment: BBBVKGKGGCGGGKC --KAGGVGGCGCT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0740.1 KLF14 Reverse Complement Reverse Complement Forward 1 11 0.064737 Taxon: Vertebrates Original motif 0.186632 0.093316 0.419271 0.300781 0.332047 0.020116 0.628272 0.019565 0.220453 0.569992 0.040235 0.169321 0.000000 0.861066 0.005385 0.133549 0.895648 0.071316 0.030414 0.002622 0.001250 0.997500 0.000000 0.001250 0.022439 0.011707 0.955772 0.010081 0.000000 0.998131 0.001869 0.000000 0.000000 0.994420 0.001860 0.003720 0.000000 0.958880 0.002384 0.038737 0.418958 0.562317 0.000585 0.018139 0.015466 0.707105 0.007250 0.270179 0.139721 0.296407 0.044411 0.519461 0.192353 0.219621 0.093065 0.494961 Consensus sequence: DRCCACGCCCMCYH Reverse complement motif 0.494961 0.219621 0.093065 0.192353 0.519461 0.296407 0.044411 0.139721 0.015466 0.007250 0.707105 0.270179 0.418958 0.000585 0.562317 0.018139 0.000000 0.002384 0.958880 0.038737 0.000000 0.001860 0.994420 0.003720 0.000000 0.001869 0.998131 0.000000 0.022439 0.955772 0.011707 0.010081 0.001250 0.000000 0.997500 0.001250 0.002622 0.071316 0.030414 0.895648 0.000000 0.005385 0.861066 0.133549 0.220453 0.040235 0.569992 0.169321 0.332047 0.628272 0.020116 0.019565 0.186632 0.419271 0.093316 0.300781 Consensus sequence: HMGRGGGCGTGGMH Alignment: HMGRGGGCGTGGMH KAGGVGGCGCT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 3 Motif name: Motif 3 Original motif 0.873146 0.020895 0.082216 0.023743 0.029083 0.040478 0.921401 0.009038 0.000126 0.975671 0.000121 0.024082 0.000126 0.000121 0.985664 0.014089 0.186842 0.806066 0.000121 0.006971 0.001545 0.996789 0.000121 0.001545 0.252276 0.432773 0.285184 0.029766 0.017442 0.849054 0.000121 0.133383 0.000126 0.992782 0.006966 0.000126 0.053528 0.053996 0.026393 0.866083 0.594629 0.003540 0.369067 0.032764 Consensus sequence: AGCGCCVCCTR Reserve complement motif 0.032764 0.003540 0.369067 0.594629 0.866083 0.053996 0.026393 0.053528 0.000126 0.006966 0.992782 0.000126 0.017442 0.000121 0.849054 0.133383 0.252276 0.285184 0.432773 0.029766 0.001545 0.000121 0.996789 0.001545 0.186842 0.000121 0.806066 0.006971 0.000126 0.985664 0.000121 0.014089 0.000126 0.000121 0.975671 0.024082 0.029083 0.921401 0.040478 0.009038 0.023743 0.020895 0.082216 0.873146 Consensus sequence: KAGGVGGCGCT ************************************************************************ Best Matches for Motif ID 3 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0139.1 CTCF Original Motif Reverse Complement Forward 2 11 0.037154 Taxon: Vertebrates Original motif 0.095290 0.318729 0.083242 0.502738 0.182913 0.158817 0.453450 0.204819 0.307777 0.053669 0.491785 0.146769 0.061336 0.876232 0.023001 0.039430 0.008762 0.989047 0.000000 0.002191 0.814896 0.014239 0.071194 0.099671 0.043812 0.578313 0.365827 0.012048 0.117325 0.474781 0.052632 0.355263 0.933114 0.012061 0.035088 0.019737 0.005488 0.000000 0.991218 0.003293 0.365532 0.003293 0.621295 0.009879 0.059276 0.013172 0.553238 0.374314 0.013187 0.000000 0.978022 0.008791 0.061538 0.008791 0.851648 0.078022 0.114411 0.806381 0.005501 0.073707 0.409241 0.014301 0.557756 0.018702 0.090308 0.530837 0.338106 0.040749 0.128855 0.354626 0.080396 0.436123 0.442731 0.199339 0.292952 0.064978 Consensus sequence: YDRCCASYAGRKGGCRSYV Reverse complement motif 0.064978 0.199339 0.292952 0.442731 0.436123 0.354626 0.080396 0.128855 0.090308 0.338106 0.530837 0.040749 0.409241 0.557756 0.014301 0.018702 0.114411 0.005501 0.806381 0.073707 0.061538 0.851648 0.008791 0.078022 0.013187 0.978022 0.000000 0.008791 0.059276 0.553238 0.013172 0.374314 0.365532 0.621295 0.003293 0.009879 0.005488 0.991218 0.000000 0.003293 0.019737 0.012061 0.035088 0.933114 0.117325 0.052632 0.474781 0.355263 0.043812 0.365827 0.578313 0.012048 0.099671 0.014239 0.071194 0.814896 0.008762 0.000000 0.989047 0.002191 0.061336 0.023001 0.876232 0.039430 0.307777 0.491785 0.053669 0.146769 0.182913 0.453450 0.158817 0.204819 0.502738 0.318729 0.083242 0.095290 Consensus sequence: BMSMGCCYMCTKSTGGMHM Alignment: BMSMGCCYMCTKSTGGMHM -AGCGCCVCCTR------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0685.1 SP4 Reverse Complement Reverse Complement Backward 6 11 0.062332 Taxon: Vertebrates Original motif 0.138895 0.314247 0.184075 0.362782 0.517012 0.037116 0.015465 0.430407 0.567190 0.031850 0.357548 0.043412 0.163731 0.001046 0.832432 0.002790 0.055237 0.943913 0.000000 0.000850 0.000432 0.969357 0.001079 0.029132 0.751376 0.247874 0.000750 0.000000 0.000429 0.999571 0.000000 0.000000 0.001811 0.002535 0.985696 0.009958 0.000427 0.998720 0.000853 0.000000 0.000633 0.998944 0.000422 0.000000 0.000000 0.984184 0.000633 0.015183 0.423378 0.559135 0.002071 0.015416 0.020632 0.780719 0.003834 0.194815 0.214528 0.168799 0.044035 0.572638 0.137621 0.285174 0.085836 0.491369 0.229582 0.280152 0.132004 0.358262 Consensus sequence: BWRGCCACGCCCMCTYH Reverse complement motif 0.358262 0.280152 0.132004 0.229582 0.491369 0.285174 0.085836 0.137621 0.572638 0.168799 0.044035 0.214528 0.020632 0.003834 0.780719 0.194815 0.423378 0.002071 0.559135 0.015416 0.000000 0.000633 0.984184 0.015183 0.000633 0.000422 0.998944 0.000000 0.000427 0.000853 0.998720 0.000000 0.001811 0.985696 0.002535 0.009958 0.000429 0.000000 0.999571 0.000000 0.000000 0.247874 0.000750 0.751376 0.000432 0.001079 0.969357 0.029132 0.055237 0.000000 0.943913 0.000850 0.163731 0.832432 0.001046 0.002790 0.043412 0.031850 0.357548 0.567190 0.430407 0.037116 0.015465 0.517012 0.362782 0.314247 0.184075 0.138895 Consensus sequence: HMAGRGGGCGTGGCKWV Alignment: HMAGRGGGCGTGGCKWV -KAGGVGGCGCT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0516.1 SP2 Reverse Complement Reverse Complement Forward 3 11 0.063762 Taxon: Vertebrates Original motif 0.094899 0.150059 0.609727 0.145314 0.023132 0.481020 0.152432 0.343416 0.030842 0.822064 0.000593 0.146501 0.000000 0.995848 0.004152 0.000000 0.000000 0.974496 0.000000 0.025504 0.103203 0.000000 0.759193 0.137604 0.000000 1.000000 0.000000 0.000000 0.000000 0.982206 0.000000 0.017794 0.000000 0.657177 0.000000 0.342823 0.122183 0.709371 0.000000 0.168446 0.068209 0.575919 0.058719 0.297153 0.110913 0.328588 0.192764 0.367734 0.134045 0.425267 0.237841 0.202847 0.135231 0.470937 0.241993 0.151839 0.120403 0.441874 0.250297 0.187426 Consensus sequence: GYCCCGCCYCYBBBB Reverse complement motif 0.120403 0.250297 0.441874 0.187426 0.135231 0.241993 0.470937 0.151839 0.134045 0.237841 0.425267 0.202847 0.367734 0.328588 0.192764 0.110913 0.068209 0.058719 0.575919 0.297153 0.122183 0.000000 0.709371 0.168446 0.000000 0.000000 0.657177 0.342823 0.000000 0.000000 0.982206 0.017794 0.000000 0.000000 1.000000 0.000000 0.103203 0.759193 0.000000 0.137604 0.000000 0.000000 0.974496 0.025504 0.000000 0.004152 0.995848 0.000000 0.030842 0.000593 0.822064 0.146501 0.023132 0.152432 0.481020 0.343416 0.094899 0.609727 0.150059 0.145314 Consensus sequence: BBBVKGKGGCGGGKC Alignment: BBBVKGKGGCGGGKC --KAGGVGGCGCT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0740.1 KLF14 Reverse Complement Reverse Complement Forward 1 11 0.064737 Taxon: Vertebrates Original motif 0.186632 0.093316 0.419271 0.300781 0.332047 0.020116 0.628272 0.019565 0.220453 0.569992 0.040235 0.169321 0.000000 0.861066 0.005385 0.133549 0.895648 0.071316 0.030414 0.002622 0.001250 0.997500 0.000000 0.001250 0.022439 0.011707 0.955772 0.010081 0.000000 0.998131 0.001869 0.000000 0.000000 0.994420 0.001860 0.003720 0.000000 0.958880 0.002384 0.038737 0.418958 0.562317 0.000585 0.018139 0.015466 0.707105 0.007250 0.270179 0.139721 0.296407 0.044411 0.519461 0.192353 0.219621 0.093065 0.494961 Consensus sequence: DRCCACGCCCMCYH Reverse complement motif 0.494961 0.219621 0.093065 0.192353 0.519461 0.296407 0.044411 0.139721 0.015466 0.007250 0.707105 0.270179 0.418958 0.000585 0.562317 0.018139 0.000000 0.002384 0.958880 0.038737 0.000000 0.001860 0.994420 0.003720 0.000000 0.001869 0.998131 0.000000 0.022439 0.955772 0.011707 0.010081 0.001250 0.000000 0.997500 0.001250 0.002622 0.071316 0.030414 0.895648 0.000000 0.005385 0.861066 0.133549 0.220453 0.040235 0.569992 0.169321 0.332047 0.628272 0.020116 0.019565 0.186632 0.419271 0.093316 0.300781 Consensus sequence: HMGRGGGCGTGGMH Alignment: HMGRGGGCGTGGMH KAGGVGGCGCT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Results created by MOTIFSIM on 04-19-2024 14:13:07 Runtime: 532.394452 seconds MOTIFSIM is written by Ngoc Tam L. 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