Best Matches in Database for Each Motif (Highest to Lowest)
| Dataset #: 1 | Motif ID: 1 | Motif name: Motif 1 |
| Original motif | Reverse complement motif |
| Consensus sequence: GGCGGGGC | Consensus sequence: GCCCCGCC |
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Best Matches for Motif ID 1 (Highest to Lowest)
| Motif ID: | UP00587 |
| Motif name: | EGR2 |
| Species: | Homo sapiens |
| Matching format of first motif: | Reverse Complement |
| Matching format of second motif: | Original Motif |
| Direction: | Backward |
| Position number: | 9 |
| Number of overlap: | 8 |
| Similarity score: | 0 |
Alignment:
THWYHHDCCCCGCCCHHHYADA
------GCCCCGCC--------
| Original motif | Reverse complement motif |
| Consensus sequence: THWYHHDCCCCGCCCHHHYADA | Consensus sequence: TDTKHHHGGGCGGGGDHHMWHA |
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| Motif ID: | UP00627 |
| Motif name: | WT1_R366C_R1 |
| Species: | Homo sapiens |
| Matching format of first motif: | Original Motif |
| Matching format of second motif: | Reverse Complement |
| Direction: | Backward |
| Position number: | 8 |
| Number of overlap: | 8 |
| Similarity score: | 0.0340362 |
Alignment:
HHHDHHDTGCGGGGGHHAHHHY
-------GGCGGGGC-------
| Original motif | Reverse complement motif |
| Consensus sequence: KHHHTHHCCCCCGCAHDHDHHH | Consensus sequence: HHHDHHDTGCGGGGGHHAHHHY |
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| Motif ID: | UP00600 |
| Motif name: | KLF11 |
| Species: | Homo sapiens |
| Matching format of first motif: | Reverse Complement |
| Matching format of second motif: | Original Motif |
| Direction: | Backward |
| Position number: | 11 |
| Number of overlap: | 8 |
| Similarity score: | 0.0368821 |
Alignment:
BHHDDHMMCGCCCCCHBSBBVH
----GCCCCGCC----------
| Original motif | Reverse complement motif |
| Consensus sequence: BHHDDHMMCGCCCCCHBSBBVH | Consensus sequence: DBBBSBDGGGGGCGYRDDHHHV |
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| Motif ID: | UP00627 |
| Motif name: | WT1_R366L_R1 |
| Species: | Homo sapiens |
| Matching format of first motif: | Reverse Complement |
| Matching format of second motif: | Reverse Complement |
| Direction: | Backward |
| Position number: | 7 |
| Number of overlap: | 8 |
| Similarity score: | 0.0478168 |
Alignment:
HHHHDMATCCCYCGCATKVBTV
--------GCCCCGCC------
| Original motif | Reverse complement motif |
| Consensus sequence: VABVRATGCGKGGGATRDDHHH | Consensus sequence: HHHHDMATCCCYCGCATKVBTV |
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| Motif ID: | UP00627 |
| Motif name: | WT1_REF_R1 |
| Species: | Homo sapiens |
| Matching format of first motif: | Original Motif |
| Matching format of second motif: | Reverse Complement |
| Direction: | Forward |
| Position number: | 7 |
| Number of overlap: | 8 |
| Similarity score: | 0.0498717 |
Alignment:
RHVMHHDGMGGGGGAGHWHTHTT
------GGCGGGGC---------
| Original motif | Reverse complement motif |
| Consensus sequence: AAHAHWHCTCCCCCRCDHHYVHM | Consensus sequence: RHVMHHDGMGGGGGAGHWHTHTT |
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| Dataset #: 3 | Motif ID: 24 | Motif name: SP1 |
| Original motif | Reverse complement motif |
| Consensus sequence: CCCCKCCCCC | Consensus sequence: GGGGGYGGGG |
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Best Matches for Motif ID 24 (Highest to Lowest)
| Motif ID: | UP00587 |
| Motif name: | EGR2 |
| Species: | Homo sapiens |
| Matching format of first motif: | Original Motif |
| Matching format of second motif: | Original Motif |
| Direction: | Backward |
| Position number: | 6 |
| Number of overlap: | 10 |
| Similarity score: | 0 |
Alignment:
THWYHHDCCCCGCCCHHHYADA
-------CCCCKCCCCC-----
| Original motif | Reverse complement motif |
| Consensus sequence: THWYHHDCCCCGCCCHHHYADA | Consensus sequence: TDTKHHHGGGCGGGGDHHMWHA |
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| Motif ID: | UP00627 |
| Motif name: | WT1_REF_R1 |
| Species: | Homo sapiens |
| Matching format of first motif: | Original Motif |
| Matching format of second motif: | Original Motif |
| Direction: | Backward |
| Position number: | 4 |
| Number of overlap: | 10 |
| Similarity score: | 0.0153751 |
Alignment:
AAHAHWHCTCCCCCRCDHHYVHM
----------CCCCKCCCCC---
| Original motif | Reverse complement motif |
| Consensus sequence: AAHAHWHCTCCCCCRCDHHYVHM | Consensus sequence: RHVMHHDGMGGGGGAGHWHTHTT |
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| Motif ID: | UP00629 |
| Motif name: | ZNF200_H322Y_R1 |
| Species: | Homo sapiens |
| Matching format of first motif: | Original Motif |
| Matching format of second motif: | Reverse Complement |
| Direction: | Forward |
| Position number: | 9 |
| Number of overlap: | 10 |
| Similarity score: | 0.0162022 |
Alignment:
YVVDHDHHHCCCACCCHHDDDDD
--------CCCCKCCCCC-----
| Original motif | Reverse complement motif |
| Consensus sequence: DDDDDHDGGGTGGGHHHDDDVVK | Consensus sequence: YVVDHDHHHCCCACCCHHDDDDD |
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| Motif ID: | UP00600 |
| Motif name: | KLF11 |
| Species: | Homo sapiens |
| Matching format of first motif: | Reverse Complement |
| Matching format of second motif: | Reverse Complement |
| Direction: | Forward |
| Position number: | 1 |
| Number of overlap: | 10 |
| Similarity score: | 0.0178026 |
Alignment:
DBBBSBDGGGGGCGYRDDHHHV
GGGGGYGGGG------------
| Original motif | Reverse complement motif |
| Consensus sequence: BHHDDHMMCGCCCCCHBSBBVH | Consensus sequence: DBBBSBDGGGGGCGYRDDHHHV |
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| Motif ID: | UP00627 |
| Motif name: | WT1_R366C_R1 |
| Species: | Homo sapiens |
| Matching format of first motif: | Reverse Complement |
| Matching format of second motif: | Reverse Complement |
| Direction: | Backward |
| Position number: | 9 |
| Number of overlap: | 10 |
| Similarity score: | 0.0274038 |
Alignment:
HHHDHHDTGCGGGGGHHAHHHY
----GGGGGYGGGG--------
| Original motif | Reverse complement motif |
| Consensus sequence: KHHHTHHCCCCCGCAHDHDHHH | Consensus sequence: HHHDHHDTGCGGGGGHHAHHHY |
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| Dataset #: 3 | Motif ID: 27 | Motif name: Klf4 |
| Original motif | Reverse complement motif |
| Consensus sequence: DGGGYGKGGC | Consensus sequence: GCCYCMCCCD |
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Best Matches for Motif ID 27 (Highest to Lowest)
| Motif ID: | UP00587 |
| Motif name: | EGR2 |
| Species: | Homo sapiens |
| Matching format of first motif: | Original Motif |
| Matching format of second motif: | Reverse Complement |
| Direction: | Backward |
| Position number: | 7 |
| Number of overlap: | 10 |
| Similarity score: | 0 |
Alignment:
TDTKHHHGGGCGGGGDHHMWHA
------DGGGYGKGGC------
| Original motif | Reverse complement motif |
| Consensus sequence: THWYHHDCCCCGCCCHHHYADA | Consensus sequence: TDTKHHHGGGCGGGGDHHMWHA |
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| Motif ID: | UP00627 |
| Motif name: | WT1_REF_R1 |
| Species: | Homo sapiens |
| Matching format of first motif: | Reverse Complement |
| Matching format of second motif: | Original Motif |
| Direction: | Forward |
| Position number: | 6 |
| Number of overlap: | 10 |
| Similarity score: | 0.0140563 |
Alignment:
AAHAHWHCTCCCCCRCDHHYVHM
-----GCCYCMCCCD--------
| Original motif | Reverse complement motif |
| Consensus sequence: AAHAHWHCTCCCCCRCDHHYVHM | Consensus sequence: RHVMHHDGMGGGGGAGHWHTHTT |
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| Motif ID: | UP00600 |
| Motif name: | KLF11 |
| Species: | Homo sapiens |
| Matching format of first motif: | Original Motif |
| Matching format of second motif: | Reverse Complement |
| Direction: | Forward |
| Position number: | 9 |
| Number of overlap: | 10 |
| Similarity score: | 0.0236259 |
Alignment:
DBBBSBDGGGGGCGYRDDHHHV
--------DGGGYGKGGC----
| Original motif | Reverse complement motif |
| Consensus sequence: BHHDDHMMCGCCCCCHBSBBVH | Consensus sequence: DBBBSBDGGGGGCGYRDDHHHV |
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| Motif ID: | UP00629 |
| Motif name: | ZNF200_H322Y_R1 |
| Species: | Homo sapiens |
| Matching format of first motif: | Original Motif |
| Matching format of second motif: | Original Motif |
| Direction: | Forward |
| Position number: | 7 |
| Number of overlap: | 10 |
| Similarity score: | 0.0319872 |
Alignment:
DDDDDHDGGGTGGGHHHDDDVVK
------DGGGYGKGGC-------
| Original motif | Reverse complement motif |
| Consensus sequence: DDDDDHDGGGTGGGHHHDDDVVK | Consensus sequence: YVVDHDHHHCCCACCCHHDDDDD |
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| Motif ID: | UP00627 |
| Motif name: | WT1_R366L_R1 |
| Species: | Homo sapiens |
| Matching format of first motif: | Original Motif |
| Matching format of second motif: | Original Motif |
| Direction: | Backward |
| Position number: | 9 |
| Number of overlap: | 10 |
| Similarity score: | 0.0363573 |
Alignment:
VABVRATGCGKGGGATRDDHHH
----DGGGYGKGGC--------
| Original motif | Reverse complement motif |
| Consensus sequence: VABVRATGCGKGGGATRDDHHH | Consensus sequence: HHHHDMATCCCYCGCATKVBTV |
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| Dataset #: 4 | Motif ID: 44 | Motif name: dhACATTCTkh |
| Original motif | Reverse complement motif |
| Consensus sequence: DHACATTCTGH | Consensus sequence: HCAGAATGTHD |
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Best Matches for Motif ID 44 (Highest to Lowest)
| Motif ID: | UP00401 |
| Motif name: | Sox4 |
| Species: | Homo sapiens |
| Matching format of first motif: | Original Motif |
| Matching format of second motif: | Reverse Complement |
| Direction: | Forward |
| Position number: | 2 |
| Number of overlap: | 11 |
| Similarity score: | 0 |
Alignment:
HBVMCWTTGTTDDD
-DHACATTCTGH--
| Original motif | Reverse complement motif |
| Consensus sequence: DDDAACAAWGRVVH | Consensus sequence: HBVMCWTTGTTDDD |
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| Motif ID: | UP00592 |
| Motif name: | GFI1B_A204T_R2 |
| Species: | Homo sapiens |
| Matching format of first motif: | Reverse Complement |
| Matching format of second motif: | Reverse Complement |
| Direction: | Backward |
| Position number: | 5 |
| Number of overlap: | 11 |
| Similarity score: | 0.0061565 |
Alignment:
TDBHVVGVMCAGATTTVMAHHAD
--------HCAGAATGTHD----
| Original motif | Reverse complement motif |
| Consensus sequence: DTDHTRBAAATCTGRVCBVHBDA | Consensus sequence: TDBHVVGVMCAGATTTVMAHHAD |
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| Motif ID: | UP00630 |
| Motif name: | ZNF655_E327G_R1 |
| Species: | Homo sapiens |
| Matching format of first motif: | Reverse Complement |
| Matching format of second motif: | Reverse Complement |
| Direction: | Forward |
| Position number: | 9 |
| Number of overlap: | 11 |
| Similarity score: | 0.00867089 |
Alignment:
VVHBDHHKTTAGCATADHDHDH
--------HCAGAATGTHD---
| Original motif | Reverse complement motif |
| Consensus sequence: HDHDDDTATGCTAAYHHDBHVV | Consensus sequence: VVHBDHHKTTAGCATADHDHDH |
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| Motif ID: | UP00630 |
| Motif name: | ZNF655_S393L_R1 |
| Species: | Homo sapiens |
| Matching format of first motif: | Reverse Complement |
| Matching format of second motif: | Reverse Complement |
| Direction: | Backward |
| Position number: | 4 |
| Number of overlap: | 11 |
| Similarity score: | 0.00939906 |
Alignment:
VBDCWHHMTTAGCATADHDHDV
--------HCAGAATGTHD---
| Original motif | Reverse complement motif |
| Consensus sequence: BDHDDDTATGCTAAYHHWGHVV | Consensus sequence: VBDCWHHMTTAGCATADHDHDV |
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| Motif ID: | UP00630 |
| Motif name: | ZNF655_S393L_R2 |
| Species: | Homo sapiens |
| Matching format of first motif: | Reverse Complement |
| Matching format of second motif: | Reverse Complement |
| Direction: | Backward |
| Position number: | 4 |
| Number of overlap: | 11 |
| Similarity score: | 0.00973712 |
Alignment:
VVDHWHHKTTAGCATADHDDDV
--------HCAGAATGTHD---
| Original motif | Reverse complement motif |
| Consensus sequence: BDHDDDTATGCTAAYHHWDHVV | Consensus sequence: VVDHWHHKTTAGCATADHDDDV |
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| Dataset #: 4 | Motif ID: 45 | Motif name: wbgTAAATAww |
| Original motif | Reverse complement motif |
| Consensus sequence: DBGTAAATAHD | Consensus sequence: DHTATTTACBD |
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Best Matches for Motif ID 45 (Highest to Lowest)
| Motif ID: | UP00616 |
| Motif name: | POU3F4 |
| Species: | Homo sapiens |
| Matching format of first motif: | Reverse Complement |
| Matching format of second motif: | Reverse Complement |
| Direction: | Backward |
| Position number: | 6 |
| Number of overlap: | 11 |
| Similarity score: | 0 |
Alignment:
BHGDBDHKTAATTAMBBBGHBC
------DHTATTTACBD-----
| Original motif | Reverse complement motif |
| Consensus sequence: GBHCBBBYTAATTARHHVDCDB | Consensus sequence: BHGDBDHKTAATTAMBBBGHBC |
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| Motif ID: | UP00585 |
| Motif name: | BCL6 |
| Species: | Homo sapiens |
| Matching format of first motif: | Reverse Complement |
| Matching format of second motif: | Reverse Complement |
| Direction: | Forward |
| Position number: | 7 |
| Number of overlap: | 11 |
| Similarity score: | 0.00546358 |
Alignment:
TDRDVVGDTAATTAHCDBADDDH
------DHTATTTACBD------
| Original motif | Reverse complement motif |
| Consensus sequence: HHDHTBDGHTAATTAHCVBDKDA | Consensus sequence: TDRDVVGDTAATTAHCDBADDDH |
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| Motif ID: | UP00596 |
| Motif name: | HOXC4_R158L_R1 |
| Species: | Homo sapiens |
| Matching format of first motif: | Original Motif |
| Matching format of second motif: | Original Motif |
| Direction: | Backward |
| Position number: | 8 |
| Number of overlap: | 11 |
| Similarity score: | 0.00584685 |
Alignment:
WHHHDDGKTAATTAHCHHADWAH
-----DBGTAAATAHD-------
| Original motif | Reverse complement motif |
| Consensus sequence: WHHHDDGKTAATTAHCHHADWAH | Consensus sequence: HTWDTDHGHTAATTARCDDHHHW |
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| Motif ID: | UP00589 |
| Motif name: | FOXC1 |
| Species: | Homo sapiens |
| Matching format of first motif: | Original Motif |
| Matching format of second motif: | Original Motif |
| Direction: | Forward |
| Position number: | 8 |
| Number of overlap: | 11 |
| Similarity score: | 0.00675467 |
Alignment:
BHVVDDWATRTAAACAAWSDBDD
-------DBGTAAATAHD-----
| Original motif | Reverse complement motif |
| Consensus sequence: BHVVDDWATRTAAACAAWSDBDD | Consensus sequence: DHBHSWTTGTTTAMATWDDVBDB |
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| Motif ID: | UP00618 |
| Motif name: | POU6F2_E639K_R1 |
| Species: | Homo sapiens |
| Matching format of first motif: | Reverse Complement |
| Matching format of second motif: | Reverse Complement |
| Direction: | Backward |
| Position number: | 6 |
| Number of overlap: | 11 |
| Similarity score: | 0.00679091 |
Alignment:
HTDHTDMDYTAATTAVHBCBHVW
-------DHTATTTACBD-----
| Original motif | Reverse complement motif |
| Consensus sequence: WBHBGVDVTAATTAKHYHADDAH | Consensus sequence: HTDHTDMDYTAATTAVHBCBHVW |
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