Best Matches in Database for Each Motif (Highest to Lowest)
| Dataset #: 1 | Motif ID: 1 | Motif name: Motif 1 |
| Original motif | Reverse complement motif |
| Consensus sequence: YGCCACCTDSTGGY | Consensus sequence: KCCASDAGGTGGCK |
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Best Matches for Motif ID 1 (Highest to Lowest)
| Motif ID: | MA0139.1 |
| Motif name: | CTCF |
| Taxon: | Vertebrates |
| Matching format of first motif: | Original Motif |
| Matching format of second motif: | Reverse Complement |
| Direction: | Backward |
| Position number: | 3 |
| Number of overlap: | 14 |
| Similarity score: | 0.0160829 |
Alignment:
BMSMGCCYMCTKSTGGMHM
---YGCCACCTDSTGGY--
| Original motif | Reverse complement motif |
| Consensus sequence: YDRCCASYAGRKGGCRSYV | Consensus sequence: BMSMGCCYMCTKSTGGMHM |
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| Motif ID: | MA0751.1 |
| Motif name: | ZIC4 |
| Taxon: | Vertebrates |
| Matching format of first motif: | Original Motif |
| Matching format of second motif: | Original Motif |
| Direction: | Backward |
| Position number: | 2 |
| Number of overlap: | 14 |
| Similarity score: | 0.0632643 |
Alignment:
GRCCCCCCGCDGHGH
YGCCACCTDSTGGY-
| Original motif | Reverse complement motif |
| Consensus sequence: GRCCCCCCGCDGHGH | Consensus sequence: DCHCDGCGGGGGGKC |
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| Motif ID: | MA0516.1 |
| Motif name: | SP2 |
| Taxon: | Vertebrates |
| Matching format of first motif: | Reverse Complement |
| Matching format of second motif: | Reverse Complement |
| Direction: | Backward |
| Position number: | 2 |
| Number of overlap: | 14 |
| Similarity score: | 0.0653294 |
Alignment:
BBBVKGKGGCGGGKC
KCCASDAGGTGGCK-
| Original motif | Reverse complement motif |
| Consensus sequence: GYCCCGCCYCYBBBB | Consensus sequence: BBBVKGKGGCGGGKC |
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| Motif ID: | MA0696.1 |
| Motif name: | ZIC1 |
| Taxon: | Vertebrates |
| Matching format of first motif: | Original Motif |
| Matching format of second motif: | Original Motif |
| Direction: | Forward |
| Position number: | 1 |
| Number of overlap: | 14 |
| Similarity score: | 0.0665163 |
Alignment:
GACCCCCYGCTGTG
YGCCACCTDSTGGY
| Original motif | Reverse complement motif |
| Consensus sequence: GACCCCCYGCTGTG | Consensus sequence: CACAGCKGGGGGTC |
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| Motif ID: | MA0743.1 |
| Motif name: | SCRT1 |
| Taxon: | Vertebrates |
| Matching format of first motif: | Original Motif |
| Matching format of second motif: | Reverse Complement |
| Direction: | Forward |
| Position number: | 1 |
| Number of overlap: | 14 |
| Similarity score: | 0.0667071 |
Alignment:
RHGCAACAGGTGGBH
YGCCACCTDSTGGY-
| Original motif | Reverse complement motif |
| Consensus sequence: RHGCAACAGGTGGBH | Consensus sequence: HVCCACCTGTTGCHM |
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| Dataset #: 1 | Motif ID: 2 | Motif name: Motif 2 |
| Original motif | Reverse complement motif |
| Consensus sequence: GCARRGGSAGS | Consensus sequence: SCTSCCKMTGC |
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Best Matches for Motif ID 2 (Highest to Lowest)
| Motif ID: | MA0517.1 |
| Motif name: | STAT1::STAT2 |
| Taxon: | Vertebrates |
| Matching format of first motif: | Original Motif |
| Matching format of second motif: | Reverse Complement |
| Direction: | Forward |
| Position number: | 2 |
| Number of overlap: | 11 |
| Similarity score: | 0.0482885 |
Alignment:
KGAAAVDGAAACTDA
-GCARRGGSAGS---
| Original motif | Reverse complement motif |
| Consensus sequence: THAGTTTCDBTTTCY | Consensus sequence: KGAAAVDGAAACTDA |
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| Motif ID: | MA0139.1 |
| Motif name: | CTCF |
| Taxon: | Vertebrates |
| Matching format of first motif: | Original Motif |
| Matching format of second motif: | Original Motif |
| Direction: | Backward |
| Position number: | 3 |
| Number of overlap: | 11 |
| Similarity score: | 0.0505245 |
Alignment:
YDRCCASYAGRKGGCRSYV
------GCARRGGSAGS--
| Original motif | Reverse complement motif |
| Consensus sequence: YDRCCASYAGRKGGCRSYV | Consensus sequence: BMSMGCCYMCTKSTGGMHM |
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| Motif ID: | MA0159.1 |
| Motif name: | RARA::RXRA |
| Taxon: | Vertebrates |
| Matching format of first motif: | Original Motif |
| Matching format of second motif: | Original Motif |
| Direction: | Forward |
| Position number: | 4 |
| Number of overlap: | 11 |
| Similarity score: | 0.0546784 |
Alignment:
RGKTCABVVRGAGGTCA
---GCARRGGSAGS---
| Original motif | Reverse complement motif |
| Consensus sequence: RGKTCABVVRGAGGTCA | Consensus sequence: TGACCTCKVVBTGAYCK |
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| Motif ID: | MA0528.1 |
| Motif name: | ZNF263 |
| Taxon: | Vertebrates |
| Matching format of first motif: | Original Motif |
| Matching format of second motif: | Original Motif |
| Direction: | Forward |
| Position number: | 7 |
| Number of overlap: | 11 |
| Similarity score: | 0.0546944 |
Alignment:
GGAGGAGGRRGRGGRGGRRGR
------GCARRGGSAGS----
| Original motif | Reverse complement motif |
| Consensus sequence: GGAGGAGGRRGRGGRGGRRGR | Consensus sequence: KCMKCCKCCMCMKCCTCCTCC |
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| Motif ID: | MA0146.2 |
| Motif name: | Zfx |
| Taxon: | Vertebrates |
| Matching format of first motif: | Reverse Complement |
| Matching format of second motif: | Original Motif |
| Direction: | Forward |
| Position number: | 1 |
| Number of overlap: | 11 |
| Similarity score: | 0.0548049 |
Alignment:
BBVGCCBVGGCCTV
SCTSCCKMTGC---
| Original motif | Reverse complement motif |
| Consensus sequence: BBVGCCBVGGCCTV | Consensus sequence: VAGGCCBBGGCVBB |
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| Dataset #: 1 | Motif ID: 3 | Motif name: Motif 3 |
| Original motif | Reverse complement motif |
| Consensus sequence: AAAAAAAAAAAAAT | Consensus sequence: ATTTTTTTTTTTTT |
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Best Matches for Motif ID 3 (Highest to Lowest)
| Motif ID: | MA0757.1 |
| Motif name: | ONECUT3 |
| Taxon: | Vertebrates |
| Matching format of first motif: | Original Motif |
| Matching format of second motif: | Original Motif |
| Direction: | Backward |
| Position number: | 1 |
| Number of overlap: | 14 |
| Similarity score: | 0.080945 |
Alignment:
VAAAAATCRATAAH
AAAAAAAAAAAAAT
| Original motif | Reverse complement motif |
| Consensus sequence: VAAAAATCRATAAH | Consensus sequence: HTTATKGATTTTTB |
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| Motif ID: | MA0481.1 |
| Motif name: | FOXP1 |
| Taxon: | Vertebrates |
| Matching format of first motif: | Original Motif |
| Matching format of second motif: | Original Motif |
| Direction: | Forward |
| Position number: | 2 |
| Number of overlap: | 14 |
| Similarity score: | 0.0852636 |
Alignment:
HHDADGTAAACAAAV
-AAAAAAAAAAAAAT
| Original motif | Reverse complement motif |
| Consensus sequence: HHDADGTAAACAAAV | Consensus sequence: VTTTGTTTACDTDHD |
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| Motif ID: | MA0051.1 |
| Motif name: | IRF2 |
| Taxon: | Vertebrates |
| Matching format of first motif: | Reverse Complement |
| Matching format of second motif: | Reverse Complement |
| Direction: | Backward |
| Position number: | 3 |
| Number of overlap: | 14 |
| Similarity score: | 0.0857756 |
Alignment:
DHWWBGSTTTCKCTTTCS
--ATTTTTTTTTTTTT--
| Original motif | Reverse complement motif |
| Consensus sequence: SGAAAGYGAAASCDWWHH | Consensus sequence: DHWWBGSTTTCKCTTTCS |
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| Motif ID: | MA0772.1 |
| Motif name: | IRF7 |
| Taxon: | Vertebrates |
| Matching format of first motif: | Original Motif |
| Matching format of second motif: | Original Motif |
| Direction: | Backward |
| Position number: | 1 |
| Number of overlap: | 14 |
| Similarity score: | 0.0886085 |
Alignment:
HCGAAARYGAAAVT
AAAAAAAAAAAAAT
| Original motif | Reverse complement motif |
| Consensus sequence: HCGAAARYGAAAVT | Consensus sequence: AVTTTCKMTTTCGH |
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| Motif ID: | MA0653.1 |
| Motif name: | IRF9 |
| Taxon: | Vertebrates |
| Matching format of first motif: | Reverse Complement |
| Matching format of second motif: | Reverse Complement |
| Direction: | Backward |
| Position number: | 1 |
| Number of overlap: | 14 |
| Similarity score: | 0.088991 |
Alignment:
AGTTTCGGTTTCGTT
-ATTTTTTTTTTTTT
| Original motif | Reverse complement motif |
| Consensus sequence: AACGAAACCGAAACT | Consensus sequence: AGTTTCGGTTTCGTT |
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| Dataset #: 1 | Motif ID: 4 | Motif name: Motif 4 |
| Original motif | Reverse complement motif |
| Consensus sequence: GGAAM | Consensus sequence: YTTCC |
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Best Matches for Motif ID 4 (Highest to Lowest)
| Motif ID: | MA0758.1 |
| Motif name: | E2F7 |
| Taxon: | Vertebrates |
| Matching format of first motif: | Original Motif |
| Matching format of second motif: | Reverse Complement |
| Direction: | Forward |
| Position number: | 9 |
| Number of overlap: | 5 |
| Similarity score: | 0.0102809 |
Alignment:
TTTTGGCGGGAAAA
--------GGAAM-
| Original motif | Reverse complement motif |
| Consensus sequence: TTTTCCCGCCAAAA | Consensus sequence: TTTTGGCGGGAAAA |
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| Motif ID: | MA0152.1 |
| Motif name: | NFATC2 |
| Taxon: | Vertebrates |
| Matching format of first motif: | Original Motif |
| Matching format of second motif: | Reverse Complement |
| Direction: | Forward |
| Position number: | 2 |
| Number of overlap: | 5 |
| Similarity score: | 0.0117445 |
Alignment:
TGGAAAA
-GGAAM-
| Original motif | Reverse complement motif |
| Consensus sequence: TTTTCCA | Consensus sequence: TGGAAAA |
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| Motif ID: | MA0076.2 |
| Motif name: | ELK4 |
| Taxon: | Vertebrates |
| Matching format of first motif: | Reverse Complement |
| Matching format of second motif: | Original Motif |
| Direction: | Backward |
| Position number: | 4 |
| Number of overlap: | 5 |
| Similarity score: | 0.0118896 |
Alignment:
BCRCTTCCGGB
---YTTCC---
| Original motif | Reverse complement motif |
| Consensus sequence: BCRCTTCCGGB | Consensus sequence: BCCGGAAGKGB |
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| Motif ID: | MA0865.1 |
| Motif name: | E2F8 |
| Taxon: | Vertebrates |
| Matching format of first motif: | Reverse Complement |
| Matching format of second motif: | Original Motif |
| Direction: | Backward |
| Position number: | 8 |
| Number of overlap: | 5 |
| Similarity score: | 0.0123964 |
Alignment:
TTTCCCGCCAAA
YTTCC-------
| Original motif | Reverse complement motif |
| Consensus sequence: TTTCCCGCCAAA | Consensus sequence: TTTGGCGGGAAA |
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| Motif ID: | MA0762.1 |
| Motif name: | ETV2 |
| Taxon: | Vertebrates |
| Matching format of first motif: | Original Motif |
| Matching format of second motif: | Original Motif |
| Direction: | Forward |
| Position number: | 5 |
| Number of overlap: | 5 |
| Similarity score: | 0.0151587 |
Alignment:
AACCGGAAATR
----GGAAM--
| Original motif | Reverse complement motif |
| Consensus sequence: AACCGGAAATR | Consensus sequence: KATTTCCGGTT |
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