**************************************************************************************************************************************************************************************************** MOTIFSIM - Motif Similarity Detection Tool Version 2.2 **************************************************************************************************************************************************************************************************** INPUT **************************************************************************************************************************************************************************************************** Input Parameters Number of files: 2 Number of top significant motifs: 1 Number of best matches: 1 Similarity cutoff: >= 0.75 Matching motif database: Jaspar Core Motif tree: No Combined similar motifs: No Output file type: All Output file format: Text Input files and motif counts File name Count of motifs Dataset # U20231120-testA.txt 19 1 U20231120-testB.txt 0 2 **************************************************************************************************************************************************************************************************** RESULTS **************************************************************************************************************************************************************************************************** ********************************************************************** Best Matches in Database for Each Motif (Highest to Lowest) ***************************************************************** Dataset #: 1 Motif ID: 1 Motif name: Motif 1 Original motif 0.628571 0.000000 0.323810 0.047619 0.295238 0.000000 0.704762 0.000000 0.495238 0.009524 0.419048 0.076190 0.885715 0.028571 0.076190 0.009524 0.171429 0.095238 0.685714 0.047619 0.666667 0.038095 0.295238 0.000000 0.390476 0.009524 0.580952 0.019048 0.361905 0.000000 0.619047 0.019048 0.238095 0.228571 0.504763 0.028571 0.504762 0.228571 0.142857 0.123810 0.333333 0.076190 0.590477 0.000000 0.428571 0.000000 0.571429 0.000000 0.676190 0.057143 0.123810 0.142857 0.457143 0.009524 0.533333 0.000000 Consensus sequence: RGRAGARRGARRAR Reserve complement motif 0.457143 0.533333 0.009524 0.000000 0.142857 0.057143 0.123810 0.676190 0.428571 0.571429 0.000000 0.000000 0.333333 0.590477 0.076190 0.000000 0.123810 0.228571 0.142857 0.504762 0.238095 0.504763 0.228571 0.028571 0.361905 0.619047 0.000000 0.019048 0.390476 0.580952 0.009524 0.019048 0.000000 0.038095 0.295238 0.666667 0.171429 0.685714 0.095238 0.047619 0.009524 0.028571 0.076190 0.885715 0.076190 0.009524 0.419048 0.495238 0.295238 0.704762 0.000000 0.000000 0.047619 0.000000 0.323810 0.628571 Consensus sequence: MTMMTCMMTCTKCK ************************************************************************ Best Matches for Motif ID 1 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0528.1 ZNF263 Original Motif Original Motif Forward 3 14 0.005635 Taxon: Vertebrates Original motif 0.155300 0.019232 0.727141 0.098326 0.301674 0.000000 0.698326 0.000000 0.729767 0.000000 0.183919 0.086314 0.029734 0.000000 0.907056 0.063210 0.066360 0.114079 0.816803 0.002757 0.913620 0.036167 0.002822 0.047391 0.102987 0.055399 0.738563 0.103052 0.101871 0.093666 0.751625 0.052839 0.532524 0.063538 0.361864 0.042074 0.336856 0.101280 0.462225 0.099639 0.203216 0.070167 0.621661 0.104956 0.433082 0.038727 0.441746 0.086446 0.274040 0.040696 0.584378 0.100886 0.269511 0.106203 0.593502 0.030784 0.521365 0.062356 0.313751 0.102527 0.250935 0.000066 0.634001 0.114998 0.205579 0.000000 0.751165 0.043256 0.545126 0.000000 0.386741 0.068133 0.343026 0.014375 0.585691 0.056908 0.266951 0.042665 0.644503 0.045881 0.476797 0.059534 0.403085 0.060584 Consensus sequence: GGAGGAGGRRGRGGRGGRRGR Reverse complement motif 0.060584 0.059534 0.403085 0.476797 0.266951 0.644503 0.042665 0.045881 0.343026 0.585691 0.014375 0.056908 0.068133 0.000000 0.386741 0.545126 0.205579 0.751165 0.000000 0.043256 0.250935 0.634001 0.000066 0.114998 0.102527 0.062356 0.313751 0.521365 0.269511 0.593502 0.106203 0.030784 0.274040 0.584378 0.040696 0.100886 0.433082 0.441746 0.038727 0.086446 0.203216 0.621661 0.070167 0.104956 0.336856 0.462225 0.101280 0.099639 0.042074 0.063538 0.361864 0.532524 0.101871 0.751625 0.093666 0.052839 0.102987 0.738563 0.055399 0.103052 0.047391 0.036167 0.002822 0.913620 0.066360 0.816803 0.114079 0.002757 0.029734 0.907056 0.000000 0.063210 0.086314 0.000000 0.183919 0.729767 0.301674 0.698326 0.000000 0.000000 0.155300 0.727141 0.019232 0.098326 Consensus sequence: KCMKCCKCCMCMKCCTCCTCC Alignment: GGAGGAGGRRGRGGRGGRRGR --RGRAGARRGARRAR----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 2 Motif name: Motif 2 Original motif 0.884615 0.076923 0.000000 0.038462 0.307692 0.153846 0.000000 0.538462 0.846154 0.000000 0.000000 0.153846 0.615385 0.000000 0.153846 0.230769 0.923077 0.076923 0.000000 0.000000 0.500000 0.038462 0.076923 0.384615 0.230769 0.153846 0.000000 0.615385 0.653846 0.000000 0.000000 0.346154 0.884615 0.115385 0.000000 0.000000 0.846154 0.000000 0.000000 0.153846 0.846153 0.115385 0.000000 0.038462 0.230769 0.346154 0.423077 0.000000 0.384615 0.000000 0.153846 0.461538 0.730769 0.000000 0.000000 0.269231 Consensus sequence: AWAAAWTWAAASWA Reserve complement motif 0.269231 0.000000 0.000000 0.730769 0.461538 0.000000 0.153846 0.384615 0.230769 0.423077 0.346154 0.000000 0.038462 0.115385 0.000000 0.846153 0.153846 0.000000 0.000000 0.846154 0.000000 0.115385 0.000000 0.884615 0.346154 0.000000 0.000000 0.653846 0.615385 0.153846 0.000000 0.230769 0.384615 0.038462 0.076923 0.500000 0.000000 0.076923 0.000000 0.923077 0.230769 0.000000 0.153846 0.615385 0.153846 0.000000 0.000000 0.846154 0.538462 0.153846 0.000000 0.307692 0.038462 0.076923 0.000000 0.884615 Consensus sequence: TWSTTTWAWTTTWT ************************************************************************ Best Matches for Motif ID 2 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0555.1 SVP Reverse Complement Reverse Complement Backward 7 14 0.024813 Taxon: Plants Original motif 0.304348 0.260870 0.228261 0.206522 0.304348 0.119565 0.086957 0.489130 0.304348 0.010870 0.108696 0.576087 0.358696 0.173913 0.119565 0.347826 0.076087 0.923913 0.000000 0.000000 0.032609 0.858696 0.010870 0.097826 0.630435 0.173913 0.076087 0.119565 0.728261 0.054348 0.086957 0.130435 0.934783 0.000000 0.000000 0.065217 0.836957 0.010870 0.021739 0.130435 0.847826 0.086957 0.032609 0.032609 0.369565 0.108696 0.152174 0.369565 0.173913 0.000000 0.804348 0.021739 0.000000 0.000000 1.000000 0.000000 0.771739 0.108696 0.000000 0.119565 0.913043 0.021739 0.021739 0.043478 0.836957 0.076087 0.021739 0.065217 0.369565 0.086957 0.423913 0.119565 0.543478 0.173913 0.054348 0.228261 0.413043 0.228261 0.032609 0.326087 Consensus sequence: VWWHCCAAAAADGGAAARAH Reverse complement motif 0.326087 0.228261 0.032609 0.413043 0.228261 0.173913 0.054348 0.543478 0.369565 0.423913 0.086957 0.119565 0.065217 0.076087 0.021739 0.836957 0.043478 0.021739 0.021739 0.913043 0.119565 0.108696 0.000000 0.771739 0.000000 1.000000 0.000000 0.000000 0.173913 0.804348 0.000000 0.021739 0.369565 0.108696 0.152174 0.369565 0.032609 0.086957 0.032609 0.847826 0.130435 0.010870 0.021739 0.836957 0.065217 0.000000 0.000000 0.934783 0.130435 0.054348 0.086957 0.728261 0.119565 0.173913 0.076087 0.630435 0.032609 0.010870 0.858696 0.097826 0.076087 0.000000 0.923913 0.000000 0.347826 0.173913 0.119565 0.358696 0.576087 0.010870 0.108696 0.304348 0.489130 0.119565 0.086957 0.304348 0.206522 0.260870 0.228261 0.304348 Consensus sequence: HTMTTTCCDTTTTTGGHWWB Alignment: HTMTTTCCDTTTTTGGHWWB TWSTTTWAWTTTWT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 3 Motif name: Motif 3 Original motif 1.000000 0.000000 0.000000 0.000000 0.947368 0.000000 0.052632 0.000000 1.000000 0.000000 0.000000 0.000000 0.789474 0.210526 0.000000 0.000000 0.473684 0.052632 0.000000 0.473684 0.210526 0.000000 0.000000 0.789474 0.052632 0.000000 0.000000 0.947368 0.631579 0.000000 0.368421 0.000000 0.052632 0.736842 0.000000 0.210526 0.421053 0.210526 0.000000 0.368421 0.263158 0.000000 0.000000 0.736842 Consensus sequence: AAAAWTTRCWT Reserve complement motif 0.736842 0.000000 0.000000 0.263158 0.368421 0.210526 0.000000 0.421053 0.052632 0.000000 0.736842 0.210526 0.000000 0.000000 0.368421 0.631579 0.947368 0.000000 0.000000 0.052632 0.789474 0.000000 0.000000 0.210526 0.473684 0.052632 0.000000 0.473684 0.000000 0.210526 0.000000 0.789474 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.052632 0.947368 0.000000 0.000000 0.000000 1.000000 Consensus sequence: AWGKAAWTTTT ************************************************************************ Best Matches for Motif ID 3 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0390.1 STB3 Reverse Complement Original Motif Forward 2 11 0.046370 Taxon: Fungi Original motif 0.098295 0.168506 0.547643 0.185557 0.166333 0.173347 0.202405 0.457916 0.182548 0.416249 0.057172 0.344032 0.194389 0.379760 0.107214 0.318637 0.508016 0.059118 0.189379 0.243487 0.547548 0.120120 0.151151 0.181181 0.777555 0.035070 0.071142 0.116232 0.499499 0.027027 0.033033 0.440440 0.099198 0.011022 0.002004 0.887776 0.053106 0.005010 0.001002 0.940882 0.010020 0.004008 0.002004 0.983968 0.013026 0.000000 0.015030 0.971944 0.000000 0.064064 0.020020 0.915916 0.003003 0.990991 0.002002 0.004004 0.965966 0.007007 0.025025 0.002002 0.150301 0.588176 0.084168 0.177355 0.129129 0.120120 0.137137 0.613614 0.166333 0.326653 0.200401 0.306613 0.308617 0.253507 0.125251 0.312625 0.233467 0.170341 0.315631 0.280561 0.226680 0.182548 0.296891 0.293882 Consensus sequence: GBYHAAAWTTTTTCACTBHDD Reverse complement motif 0.226680 0.296891 0.182548 0.293882 0.233467 0.315631 0.170341 0.280561 0.312625 0.253507 0.125251 0.308617 0.166333 0.200401 0.326653 0.306613 0.613614 0.120120 0.137137 0.129129 0.150301 0.084168 0.588176 0.177355 0.002002 0.007007 0.025025 0.965966 0.003003 0.002002 0.990991 0.004004 0.915916 0.064064 0.020020 0.000000 0.971944 0.000000 0.015030 0.013026 0.983968 0.004008 0.002004 0.010020 0.940882 0.005010 0.001002 0.053106 0.887776 0.011022 0.002004 0.099198 0.440440 0.027027 0.033033 0.499499 0.116232 0.035070 0.071142 0.777555 0.181181 0.120120 0.151151 0.547548 0.243487 0.059118 0.189379 0.508016 0.194389 0.107214 0.379760 0.318637 0.182548 0.057172 0.416249 0.344032 0.457916 0.173347 0.202405 0.166333 0.098295 0.547643 0.168506 0.185557 Consensus sequence: HHHBAGTGAAAAAWTTTDKVC Alignment: GBYHAAAWTTTTTCACTBHDD -AWGKAAWTTTT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 4 Motif name: Motif 4 Original motif 1.000000 0.000000 0.000000 0.000000 0.500000 0.000000 0.000000 0.500000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.500000 0.000000 0.500000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 Consensus sequence: AWTAAATAYAATTT Reserve complement motif 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.500000 0.500000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.500000 0.000000 0.000000 0.500000 0.000000 0.000000 0.000000 1.000000 Consensus sequence: AAATTKTATTTAWT ************************************************************************ Best Matches for Motif ID 4 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0869.1 Sox11 Reverse Complement Reverse Complement Forward 2 14 0.073479 Taxon: Vertebrates Original motif 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.003268 0.000000 0.996732 0.050617 0.048148 0.376543 0.524691 0.000000 0.996732 0.000000 0.003268 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.754950 0.245050 0.000000 0.000000 0.006515 0.993485 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.003077 0.043077 0.015385 0.938462 Consensus sequence: AACAATTKCAGTGTT Reverse complement motif 0.938462 0.043077 0.015385 0.003077 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.993485 0.000000 0.006515 0.000000 0.000000 0.754950 0.000000 0.245050 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.996732 0.003268 0.524691 0.048148 0.376543 0.050617 0.996732 0.003268 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 Consensus sequence: AACACTGRAATTGTT Alignment: AACACTGRAATTGTT -AAATTKTATTTAWT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 5 Motif name: Motif 5 Original motif 0.750000 0.000000 0.000000 0.250000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.500000 0.000000 0.500000 0.500000 0.000000 0.250000 0.250000 0.000000 0.000000 0.875000 0.125000 0.875000 0.125000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.500000 0.125000 0.375000 0.000000 0.250000 0.125000 0.000000 0.625000 1.000000 0.000000 0.000000 0.000000 0.625000 0.000000 0.000000 0.375000 0.500000 0.000000 0.000000 0.500000 Consensus sequence: AATTYDGAARTAWW Reserve complement motif 0.500000 0.000000 0.000000 0.500000 0.375000 0.000000 0.000000 0.625000 0.000000 0.000000 0.000000 1.000000 0.625000 0.125000 0.000000 0.250000 0.000000 0.125000 0.375000 0.500000 0.000000 0.000000 0.000000 1.000000 0.000000 0.125000 0.000000 0.875000 0.000000 0.875000 0.000000 0.125000 0.250000 0.000000 0.250000 0.500000 0.000000 0.000000 0.500000 0.500000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.250000 0.000000 0.000000 0.750000 Consensus sequence: WWTAKTTCDKAATT ************************************************************************ Best Matches for Motif ID 5 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0400.1 SUT2 Reverse Complement Reverse Complement Backward 7 14 0.087294 Taxon: Fungi Original motif 0.333667 0.232465 0.112224 0.321643 0.225451 0.206413 0.264529 0.303607 0.269809 0.218656 0.277834 0.233701 0.354354 0.200200 0.100100 0.345345 0.248497 0.216433 0.153307 0.381764 0.523046 0.085170 0.287575 0.104208 0.941884 0.006012 0.012024 0.040080 0.972946 0.000000 0.011022 0.016032 0.000000 0.710421 0.287575 0.002004 0.001002 0.016032 0.000000 0.982966 0.002006 0.994985 0.001003 0.002006 0.001002 0.985972 0.012024 0.001002 0.002004 0.001002 0.994990 0.002004 0.791374 0.016048 0.168506 0.024072 0.524574 0.080241 0.257773 0.137412 0.375752 0.252505 0.154309 0.217435 0.338338 0.214214 0.168168 0.279279 0.279559 0.204409 0.209419 0.306613 0.163327 0.253507 0.252505 0.330661 0.281281 0.136136 0.244244 0.338338 Consensus sequence: HDDHHRAACTCCGAAHHDBD Reverse complement motif 0.338338 0.136136 0.244244 0.281281 0.330661 0.253507 0.252505 0.163327 0.306613 0.204409 0.209419 0.279559 0.279279 0.214214 0.168168 0.338338 0.217435 0.252505 0.154309 0.375752 0.137412 0.080241 0.257773 0.524574 0.024072 0.016048 0.168506 0.791374 0.002004 0.994990 0.001002 0.002004 0.001002 0.012024 0.985972 0.001002 0.002006 0.001003 0.994985 0.002006 0.982966 0.016032 0.000000 0.001002 0.000000 0.287575 0.710421 0.002004 0.016032 0.000000 0.011022 0.972946 0.040080 0.006012 0.012024 0.941884 0.104208 0.085170 0.287575 0.523046 0.381764 0.216433 0.153307 0.248497 0.345345 0.200200 0.100100 0.354354 0.269809 0.277834 0.218656 0.233701 0.303607 0.206413 0.264529 0.225451 0.321643 0.232465 0.112224 0.333667 Consensus sequence: DVDHHTTCGGAGTTKHHHDH Alignment: DVDHHTTCGGAGTTKHHHDH WWTAKTTCDKAATT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 6 Motif name: Motif 6 Original motif 0.094340 0.566037 0.113208 0.226415 0.150943 0.547170 0.283019 0.018868 0.018868 0.000000 0.622641 0.358491 0.000000 0.943396 0.056604 0.000000 0.018868 0.811321 0.000000 0.169811 0.018868 0.943396 0.000000 0.037736 0.000000 0.981132 0.018868 0.000000 0.037736 0.000000 0.867924 0.094340 0.018868 0.981132 0.000000 0.000000 0.075472 0.924528 0.000000 0.000000 0.000000 0.830189 0.000000 0.169811 0.132075 0.773585 0.000000 0.094340 0.000000 0.433962 0.377358 0.188679 0.075472 0.358491 0.075472 0.490566 Consensus sequence: CSKCCCCGCCCCSY Reserve complement motif 0.490566 0.358491 0.075472 0.075472 0.000000 0.377358 0.433962 0.188679 0.132075 0.000000 0.773585 0.094340 0.000000 0.000000 0.830189 0.169811 0.075472 0.000000 0.924528 0.000000 0.018868 0.000000 0.981132 0.000000 0.037736 0.867924 0.000000 0.094340 0.000000 0.018868 0.981132 0.000000 0.018868 0.000000 0.943396 0.037736 0.018868 0.000000 0.811321 0.169811 0.000000 0.056604 0.943396 0.000000 0.018868 0.622641 0.000000 0.358491 0.150943 0.283019 0.547170 0.018868 0.094340 0.113208 0.566037 0.226415 Consensus sequence: MSGGGGCGGGGYSG ************************************************************************ Best Matches for Motif ID 6 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0685.1 SP4 Original Motif Original Motif Backward 3 14 0.032570 Taxon: Vertebrates Original motif 0.138895 0.314247 0.184075 0.362782 0.517012 0.037116 0.015465 0.430407 0.567190 0.031850 0.357548 0.043412 0.163731 0.001046 0.832432 0.002790 0.055237 0.943913 0.000000 0.000850 0.000432 0.969357 0.001079 0.029132 0.751376 0.247874 0.000750 0.000000 0.000429 0.999571 0.000000 0.000000 0.001811 0.002535 0.985696 0.009958 0.000427 0.998720 0.000853 0.000000 0.000633 0.998944 0.000422 0.000000 0.000000 0.984184 0.000633 0.015183 0.423378 0.559135 0.002071 0.015416 0.020632 0.780719 0.003834 0.194815 0.214528 0.168799 0.044035 0.572638 0.137621 0.285174 0.085836 0.491369 0.229582 0.280152 0.132004 0.358262 Consensus sequence: BWRGCCACGCCCMCTYH Reverse complement motif 0.358262 0.280152 0.132004 0.229582 0.491369 0.285174 0.085836 0.137621 0.572638 0.168799 0.044035 0.214528 0.020632 0.003834 0.780719 0.194815 0.423378 0.002071 0.559135 0.015416 0.000000 0.000633 0.984184 0.015183 0.000633 0.000422 0.998944 0.000000 0.000427 0.000853 0.998720 0.000000 0.001811 0.985696 0.002535 0.009958 0.000429 0.000000 0.999571 0.000000 0.000000 0.247874 0.000750 0.751376 0.000432 0.001079 0.969357 0.029132 0.055237 0.000000 0.943913 0.000850 0.163731 0.832432 0.001046 0.002790 0.043412 0.031850 0.357548 0.567190 0.430407 0.037116 0.015465 0.517012 0.362782 0.314247 0.184075 0.138895 Consensus sequence: HMAGRGGGCGTGGCKWV Alignment: BWRGCCACGCCCMCTYH -CSKCCCCGCCCCSY-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 7 Motif name: Motif 7 Original motif 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.500000 0.000000 0.500000 0.000000 0.500000 0.000000 0.000000 0.500000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 Consensus sequence: AAATRWTAAAATCA Reserve complement motif 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.500000 0.000000 0.000000 0.500000 0.000000 0.000000 0.500000 0.500000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 Consensus sequence: TGATTTTAWKATTT ************************************************************************ Best Matches for Motif ID 7 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0729.1 RARA Reverse Complement Reverse Complement Backward 2 14 0.078646 Taxon: Vertebrates Original motif 0.325521 0.001302 0.667969 0.005208 0.933702 0.001842 0.064457 0.000000 0.000000 0.000000 1.000000 0.000000 0.001305 0.000000 0.973890 0.024804 0.000000 0.008850 0.001770 0.989381 0.002721 0.961905 0.035374 0.000000 0.992481 0.000000 0.007519 0.000000 0.734637 0.000000 0.039106 0.226257 0.929329 0.000000 0.005300 0.065371 0.983051 0.009416 0.007533 0.000000 0.000000 0.000000 0.998684 0.001316 0.000000 0.000000 0.881871 0.118129 0.005464 0.000000 0.000000 0.994536 0.000000 0.997171 0.000000 0.002829 0.998152 0.000000 0.001848 0.000000 0.685751 0.045802 0.038168 0.230280 0.003584 0.000000 0.408602 0.587814 0.000000 0.207957 0.408680 0.383363 Consensus sequence: GAGGTCAAAAGGTCAAKK Reverse complement motif 0.000000 0.408680 0.207957 0.383363 0.587814 0.000000 0.408602 0.003584 0.230280 0.045802 0.038168 0.685751 0.000000 0.000000 0.001848 0.998152 0.000000 0.000000 0.997171 0.002829 0.994536 0.000000 0.000000 0.005464 0.000000 0.881871 0.000000 0.118129 0.000000 0.998684 0.000000 0.001316 0.000000 0.009416 0.007533 0.983051 0.065371 0.000000 0.005300 0.929329 0.226257 0.000000 0.039106 0.734637 0.000000 0.000000 0.007519 0.992481 0.002721 0.035374 0.961905 0.000000 0.989381 0.008850 0.001770 0.000000 0.001305 0.973890 0.000000 0.024804 0.000000 1.000000 0.000000 0.000000 0.000000 0.001842 0.064457 0.933702 0.325521 0.667969 0.001302 0.005208 Consensus sequence: YRTTGACCTTTTGACCTC Alignment: YRTTGACCTTTTGACCTC ---TGATTTTAWKATTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 8 Motif name: Motif 8 Original motif 0.916667 0.000000 0.000000 0.083333 0.666667 0.000000 0.083333 0.250000 0.000000 0.000000 0.333333 0.666667 0.333333 0.166667 0.083333 0.416667 0.666667 0.083333 0.083333 0.166667 0.250000 0.000000 0.000000 0.750000 0.916667 0.000000 0.083333 0.000000 0.250000 0.000000 0.000000 0.750000 0.333333 0.083333 0.000000 0.583334 0.000000 0.000000 0.000000 1.000000 0.250000 0.333333 0.166667 0.250000 1.000000 0.000000 0.000000 0.000000 0.666667 0.250000 0.083333 0.000000 1.000000 0.000000 0.000000 0.000000 Consensus sequence: AATHATATWTHAAA Reserve complement motif 0.000000 0.000000 0.000000 1.000000 0.000000 0.250000 0.083333 0.666667 0.000000 0.000000 0.000000 1.000000 0.250000 0.166667 0.333333 0.250000 1.000000 0.000000 0.000000 0.000000 0.583334 0.083333 0.000000 0.333333 0.750000 0.000000 0.000000 0.250000 0.000000 0.000000 0.083333 0.916667 0.750000 0.000000 0.000000 0.250000 0.166667 0.083333 0.083333 0.666667 0.416667 0.166667 0.083333 0.333333 0.666667 0.000000 0.333333 0.000000 0.250000 0.000000 0.083333 0.666667 0.083333 0.000000 0.000000 0.916667 Consensus sequence: TTTDAWATATHATT ************************************************************************ Best Matches for Motif ID 8 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0345.1 NHP6A Reverse Complement Reverse Complement Forward 5 14 0.045914 Taxon: Fungi Original motif 0.306306 0.279279 0.214214 0.200200 0.242485 0.217435 0.083166 0.456914 0.236473 0.153307 0.311623 0.298597 0.380762 0.212425 0.151303 0.255511 0.285571 0.333667 0.099198 0.281563 0.104208 0.517034 0.049098 0.329659 0.339679 0.130261 0.071142 0.458918 0.491984 0.250501 0.064128 0.193387 0.114114 0.024024 0.006006 0.855856 0.905717 0.010030 0.026078 0.058175 0.126253 0.029058 0.008016 0.836673 0.848697 0.016032 0.043086 0.092184 0.057114 0.042084 0.028056 0.872745 0.747495 0.016032 0.020040 0.216433 0.650651 0.030030 0.153153 0.166166 0.377756 0.136273 0.137275 0.348697 0.376128 0.138415 0.138415 0.347041 0.416834 0.111222 0.172345 0.299599 0.286573 0.154309 0.124248 0.434870 0.313627 0.147295 0.314629 0.224449 0.329659 0.289579 0.096192 0.284569 Consensus sequence: VHDHHYWHTATATAADDDHDH Reverse complement motif 0.284569 0.289579 0.096192 0.329659 0.313627 0.314629 0.147295 0.224449 0.434870 0.154309 0.124248 0.286573 0.299599 0.111222 0.172345 0.416834 0.347041 0.138415 0.138415 0.376128 0.348697 0.136273 0.137275 0.377756 0.166166 0.030030 0.153153 0.650651 0.216433 0.016032 0.020040 0.747495 0.872745 0.042084 0.028056 0.057114 0.092184 0.016032 0.043086 0.848697 0.836673 0.029058 0.008016 0.126253 0.058175 0.010030 0.026078 0.905717 0.855856 0.024024 0.006006 0.114114 0.193387 0.250501 0.064128 0.491984 0.458918 0.130261 0.071142 0.339679 0.104208 0.049098 0.517034 0.329659 0.285571 0.099198 0.333667 0.281563 0.255511 0.212425 0.151303 0.380762 0.236473 0.311623 0.153307 0.298597 0.456914 0.217435 0.083166 0.242485 0.200200 0.279279 0.214214 0.306306 Consensus sequence: HHHDDDTTATATAHWKDHHHB Alignment: HHHDDDTTATATAHWKDHHHB ----TTTDAWATATHATT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 9 Motif name: Motif 9 Original motif 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.500000 0.000000 0.000000 0.500000 0.000000 0.000000 0.000000 1.000000 Consensus sequence: TTTCATAAWT Reserve complement motif 1.000000 0.000000 0.000000 0.000000 0.500000 0.000000 0.000000 0.500000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 Consensus sequence: AWTTATGAAA ************************************************************************ Best Matches for Motif ID 9 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0683.1 POU4F2 Reverse Complement Reverse Complement Forward 7 10 0.057134 Taxon: Vertebrates Original motif 0.458603 0.147430 0.237304 0.156664 0.036172 0.039790 0.017428 0.906610 0.051494 0.009072 0.917823 0.021612 0.318857 0.679219 0.000550 0.001374 0.993226 0.001935 0.001290 0.003548 0.000353 0.000000 0.000000 0.999647 0.914094 0.002751 0.004280 0.078875 0.750358 0.023476 0.015173 0.210993 0.026270 0.018666 0.009679 0.945385 0.101672 0.003010 0.002676 0.892642 0.907174 0.007613 0.068521 0.016691 0.995938 0.001250 0.002812 0.000000 0.006600 0.010420 0.023967 0.959014 0.036486 0.047151 0.615493 0.300870 0.806815 0.060813 0.070511 0.061861 0.162346 0.148506 0.626538 0.062610 Consensus sequence: DTGCATAATTAATGAG Reverse complement motif 0.162346 0.626538 0.148506 0.062610 0.061861 0.060813 0.070511 0.806815 0.036486 0.615493 0.047151 0.300870 0.959014 0.010420 0.023967 0.006600 0.000000 0.001250 0.002812 0.995938 0.016691 0.007613 0.068521 0.907174 0.892642 0.003010 0.002676 0.101672 0.945385 0.018666 0.009679 0.026270 0.210993 0.023476 0.015173 0.750358 0.078875 0.002751 0.004280 0.914094 0.999647 0.000000 0.000000 0.000353 0.003548 0.001935 0.001290 0.993226 0.318857 0.000550 0.679219 0.001374 0.051494 0.917823 0.009072 0.021612 0.906610 0.039790 0.017428 0.036172 0.156664 0.147430 0.237304 0.458603 Consensus sequence: CTCATTAATTATGCAD Alignment: CTCATTAATTATGCAD ------AWTTATGAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 10 Motif name: Motif 10 Original motif 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.500000 0.000000 0.000000 0.500000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 Consensus sequence: ATTTWATGAAA Reserve complement motif 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.500000 0.000000 0.000000 0.500000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 Consensus sequence: TTTCATWAAAT ************************************************************************ Best Matches for Motif ID 10 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0906.1 HOXC12 Original Motif Reverse Complement Backward 1 11 0.078604 Taxon: Vertebrates Original motif 0.337366 0.060261 0.505351 0.097022 0.201085 0.112991 0.685764 0.000160 0.002513 0.015532 0.000457 0.981498 0.042603 0.919931 0.002569 0.034896 0.080428 0.000428 0.919144 0.000000 0.000000 0.000465 0.000233 0.999302 0.882522 0.002875 0.001027 0.113576 0.993756 0.000000 0.000463 0.005782 0.990320 0.002996 0.000000 0.006684 0.751618 0.111247 0.047053 0.090082 0.335583 0.265069 0.086572 0.312776 Consensus sequence: RGTCGTAAAAH Reverse complement motif 0.312776 0.265069 0.086572 0.335583 0.090082 0.111247 0.047053 0.751618 0.006684 0.002996 0.000000 0.990320 0.005782 0.000000 0.000463 0.993756 0.113576 0.002875 0.001027 0.882522 0.999302 0.000465 0.000233 0.000000 0.080428 0.919144 0.000428 0.000000 0.042603 0.002569 0.919931 0.034896 0.981498 0.015532 0.000457 0.002513 0.201085 0.685764 0.112991 0.000160 0.337366 0.505351 0.060261 0.097022 Consensus sequence: HTTTTACGACM Alignment: HTTTTACGACM ATTTWATGAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 11 Motif name: Motif 11 Original motif 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 Consensus sequence: AAAACAAA Reserve complement motif 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 Consensus sequence: TTTGTTTT ************************************************************************ Best Matches for Motif ID 11 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0481.1 FOXP1 Original Motif Original Motif Forward 7 8 0.024974 Taxon: Vertebrates Original motif 0.331190 0.347267 0.154341 0.167203 0.421222 0.183280 0.176849 0.218650 0.498392 0.125402 0.128617 0.247588 0.578778 0.135048 0.170418 0.115756 0.443730 0.019293 0.282958 0.254019 0.254019 0.035370 0.710611 0.000000 0.228296 0.012862 0.000000 0.758842 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.051447 0.893891 0.032154 0.022508 1.000000 0.000000 0.000000 0.000000 0.565916 0.247588 0.183280 0.003215 0.781350 0.057878 0.073955 0.086817 0.327974 0.135048 0.414791 0.122186 Consensus sequence: HHDADGTAAACAAAV Reverse complement motif 0.327974 0.414791 0.135048 0.122186 0.086817 0.057878 0.073955 0.781350 0.003215 0.247588 0.183280 0.565916 0.000000 0.000000 0.000000 1.000000 0.051447 0.032154 0.893891 0.022508 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.758842 0.012862 0.000000 0.228296 0.254019 0.710611 0.035370 0.000000 0.254019 0.019293 0.282958 0.443730 0.115756 0.135048 0.170418 0.578778 0.247588 0.125402 0.128617 0.498392 0.218650 0.183280 0.176849 0.421222 0.331190 0.154341 0.347267 0.167203 Consensus sequence: VTTTGTTTACDTDHD Alignment: HHDADGTAAACAAAV ------AAAACAAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 12 Motif name: Motif 12 Original motif 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 Consensus sequence: AAAGATTT Reserve complement motif 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 Consensus sequence: AAATCTTT ************************************************************************ Best Matches for Motif ID 12 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0435.1 YPR015C Original Motif Reverse Complement Backward 10 8 0.024014 Taxon: Fungi Original motif 0.075150 0.242485 0.144289 0.538076 0.158317 0.204409 0.341683 0.295591 0.382382 0.170170 0.173173 0.274274 0.376754 0.240481 0.137275 0.245491 0.274549 0.050100 0.462926 0.212425 0.553106 0.169339 0.240481 0.037074 0.016032 0.748497 0.017034 0.218437 0.004008 0.004008 0.989980 0.002004 0.002002 0.016016 0.003003 0.978979 0.984970 0.007014 0.003006 0.005010 0.885772 0.001002 0.109218 0.004008 0.987976 0.002004 0.004008 0.006012 0.005010 0.002004 0.002004 0.990982 0.004012 0.985958 0.001003 0.009027 0.326326 0.575576 0.055055 0.043043 0.086259 0.221665 0.077232 0.614845 0.258517 0.190381 0.196393 0.354709 0.450450 0.110110 0.173173 0.266266 0.281281 0.396396 0.062062 0.260260 0.334002 0.330993 0.068205 0.266800 Consensus sequence: TBDHDACGTAAATCMTDDHH Reverse complement motif 0.266800 0.330993 0.068205 0.334002 0.281281 0.062062 0.396396 0.260260 0.266266 0.110110 0.173173 0.450450 0.354709 0.190381 0.196393 0.258517 0.614845 0.221665 0.077232 0.086259 0.326326 0.055055 0.575576 0.043043 0.004012 0.001003 0.985958 0.009027 0.990982 0.002004 0.002004 0.005010 0.006012 0.002004 0.004008 0.987976 0.004008 0.001002 0.109218 0.885772 0.005010 0.007014 0.003006 0.984970 0.978979 0.016016 0.003003 0.002002 0.004008 0.989980 0.004008 0.002004 0.016032 0.017034 0.748497 0.218437 0.037074 0.169339 0.240481 0.553106 0.274549 0.462926 0.050100 0.212425 0.245491 0.240481 0.137275 0.376754 0.274274 0.170170 0.173173 0.382382 0.158317 0.341683 0.204409 0.295591 0.538076 0.242485 0.144289 0.075150 Consensus sequence: HDDDARGATTTACGTHHDBA Alignment: HDDDARGATTTACGTHHDBA ---AAAGATTT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 13 Motif name: Motif 13 Original motif 1.000000 0.000000 0.000000 0.000000 0.500000 0.000000 0.000000 0.500000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 Consensus sequence: AWAAATAA Reserve complement motif 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.500000 0.000000 0.000000 0.500000 0.000000 0.000000 0.000000 1.000000 Consensus sequence: TTATTTWT ************************************************************************ Best Matches for Motif ID 13 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0052.3 MEF2A Original Motif Original Motif Backward 2 8 0.000000 Taxon: Vertebrates Original motif 0.135732 0.070319 0.388389 0.405560 0.047398 0.902416 0.002788 0.047398 0.000000 0.009184 0.000000 0.990816 0.992843 0.003067 0.000000 0.004090 0.531346 0.000000 0.002055 0.466598 0.860816 0.001773 0.000000 0.137411 0.950098 0.000000 0.000000 0.049902 0.957594 0.003945 0.000000 0.038462 0.000000 0.002055 0.000000 0.997945 0.996920 0.002053 0.000000 0.001027 0.143105 0.004337 0.842151 0.010408 0.544715 0.332430 0.037037 0.085818 Consensus sequence: KCTAWAAATAGM Reverse complement motif 0.085818 0.332430 0.037037 0.544715 0.143105 0.842151 0.004337 0.010408 0.001027 0.002053 0.000000 0.996920 0.997945 0.002055 0.000000 0.000000 0.038462 0.003945 0.000000 0.957594 0.049902 0.000000 0.000000 0.950098 0.137411 0.001773 0.000000 0.860816 0.466598 0.000000 0.002055 0.531346 0.004090 0.003067 0.000000 0.992843 0.990816 0.009184 0.000000 0.000000 0.047398 0.002788 0.902416 0.047398 0.405560 0.070319 0.388389 0.135732 Consensus sequence: YCTATTTWTAGR Alignment: KCTAWAAATAGM ---AWAAATAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 14 Motif name: Motif 14 Original motif 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.500000 0.500000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 Consensus sequence: ATMACAATAAAA Reserve complement motif 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.500000 0.000000 0.500000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 Consensus sequence: TTTTATTGTYAT ************************************************************************ Best Matches for Motif ID 14 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0050.2 IRF1 Reverse Complement Original Motif Forward 7 12 0.101031 Taxon: Vertebrates Original motif 0.232012 0.234949 0.195301 0.337739 0.184288 0.208517 0.184288 0.422907 0.127019 0.237885 0.155653 0.479442 0.101322 0.315712 0.108664 0.474302 0.539648 0.074156 0.265051 0.121145 0.017621 0.581498 0.371512 0.029369 0.008811 0.000000 0.000000 0.991189 0.000000 0.022761 0.000000 0.977239 0.000000 0.041116 0.002937 0.955947 0.000000 0.917034 0.000000 0.082966 0.670338 0.028634 0.174743 0.126285 0.014684 0.577827 0.253304 0.154185 0.011747 0.000734 0.000000 0.987518 0.005140 0.010279 0.003671 0.980910 0.008076 0.042584 0.000000 0.949339 0.012482 0.751101 0.020558 0.215859 0.376652 0.179883 0.193098 0.250367 0.160059 0.340675 0.213656 0.285609 0.106461 0.136564 0.083700 0.673275 0.145374 0.141703 0.072687 0.640235 0.121880 0.243025 0.110866 0.524229 Consensus sequence: HBBYASTTTCACTTTCDBTTT Reverse complement motif 0.524229 0.243025 0.110866 0.121880 0.640235 0.141703 0.072687 0.145374 0.673275 0.136564 0.083700 0.106461 0.160059 0.213656 0.340675 0.285609 0.250367 0.179883 0.193098 0.376652 0.012482 0.020558 0.751101 0.215859 0.949339 0.042584 0.000000 0.008076 0.980910 0.010279 0.003671 0.005140 0.987518 0.000734 0.000000 0.011747 0.014684 0.253304 0.577827 0.154185 0.126285 0.028634 0.174743 0.670338 0.000000 0.000000 0.917034 0.082966 0.955947 0.041116 0.002937 0.000000 0.977239 0.022761 0.000000 0.000000 0.991189 0.000000 0.000000 0.008811 0.017621 0.371512 0.581498 0.029369 0.121145 0.074156 0.265051 0.539648 0.474302 0.315712 0.108664 0.101322 0.479442 0.237885 0.155653 0.127019 0.422907 0.208517 0.184288 0.184288 0.337739 0.234949 0.195301 0.232012 Consensus sequence: AAABDGAAAGTGAAASTMVHH Alignment: HBBYASTTTCACTTTCDBTTT ------TTTTATTGTYAT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 15 Motif name: Motif 15 Original motif 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.500000 0.000000 0.000000 0.500000 0.000000 0.000000 0.000000 1.000000 0.500000 0.000000 0.500000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 Consensus sequence: ACAAWTRATTTTGA Reserve complement motif 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.500000 0.500000 1.000000 0.000000 0.000000 0.000000 0.500000 0.000000 0.000000 0.500000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 Consensus sequence: TCAAAATKAWTTGT ************************************************************************ Best Matches for Motif ID 15 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0868.1 SOX8 Reverse Complement Original Motif Backward 2 14 0.098681 Taxon: Vertebrates Original motif 0.985011 0.000000 0.000000 0.014989 1.000000 0.000000 0.000000 0.000000 0.002169 0.997831 0.000000 0.000000 0.995671 0.000000 0.004329 0.000000 0.993521 0.002160 0.002160 0.002160 0.000000 0.000000 0.002169 0.997831 0.321429 0.013889 0.591270 0.073413 0.002169 0.000000 0.000000 0.997831 0.056497 0.077213 0.698682 0.167608 0.000000 0.991379 0.004310 0.004310 1.000000 0.000000 0.000000 0.000000 0.002160 0.000000 0.993521 0.004320 0.000000 0.000000 0.002169 0.997831 0.000000 0.000000 1.000000 0.000000 0.002169 0.000000 0.000000 0.997831 0.000000 0.008621 0.000000 0.991379 Consensus sequence: AACAATRTGCAGTGTT Reverse complement motif 0.991379 0.008621 0.000000 0.000000 0.997831 0.000000 0.000000 0.002169 0.000000 1.000000 0.000000 0.000000 0.997831 0.000000 0.002169 0.000000 0.002160 0.993521 0.000000 0.004320 0.000000 0.000000 0.000000 1.000000 0.000000 0.004310 0.991379 0.004310 0.056497 0.698682 0.077213 0.167608 0.997831 0.000000 0.000000 0.002169 0.321429 0.591270 0.013889 0.073413 0.997831 0.000000 0.002169 0.000000 0.002160 0.002160 0.002160 0.993521 0.000000 0.000000 0.004329 0.995671 0.002169 0.000000 0.997831 0.000000 0.000000 0.000000 0.000000 1.000000 0.014989 0.000000 0.000000 0.985011 Consensus sequence: AACACTGCAMATTGTT Alignment: AACAATRTGCAGTGTT -TCAAAATKAWTTGT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 16 Motif name: Motif 16 Original motif 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 Consensus sequence: AAAAATGAAT Reserve complement motif 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 Consensus sequence: ATTCATTTTT ************************************************************************ Best Matches for Motif ID 16 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0757.1 ONECUT3 Reverse Complement Reverse Complement Backward 2 10 0.036681 Taxon: Vertebrates Original motif 0.466941 0.168092 0.228289 0.136678 0.633388 0.062336 0.187664 0.116612 0.786546 0.035446 0.064424 0.113583 0.801476 0.022805 0.014764 0.160954 0.970626 0.004470 0.016284 0.008621 0.990712 0.000815 0.006681 0.001792 0.005137 0.016536 0.002248 0.976080 0.003764 0.994927 0.000491 0.000818 0.646375 0.003273 0.348552 0.001800 0.993951 0.000981 0.001471 0.003597 0.007008 0.000978 0.001141 0.990874 0.905166 0.015632 0.027840 0.051362 0.595395 0.141612 0.068586 0.194408 0.306200 0.209012 0.104095 0.380694 Consensus sequence: VAAAAATCRATAAH Reverse complement motif 0.380694 0.209012 0.104095 0.306200 0.194408 0.141612 0.068586 0.595395 0.051362 0.015632 0.027840 0.905166 0.990874 0.000978 0.001141 0.007008 0.003597 0.000981 0.001471 0.993951 0.001800 0.003273 0.348552 0.646375 0.003764 0.000491 0.994927 0.000818 0.976080 0.016536 0.002248 0.005137 0.001792 0.000815 0.006681 0.990712 0.008621 0.004470 0.016284 0.970626 0.160954 0.022805 0.014764 0.801476 0.113583 0.035446 0.064424 0.786546 0.116612 0.062336 0.187664 0.633388 0.136678 0.168092 0.228289 0.466941 Consensus sequence: HTTATKGATTTTTB Alignment: HTTATKGATTTTTB ---ATTCATTTTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 17 Motif name: Motif 17 Original motif 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.500000 0.000000 0.000000 0.500000 0.000000 0.000000 0.000000 1.000000 0.500000 0.000000 0.000000 0.500000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 Consensus sequence: TTAGWTWATAA Reserve complement motif 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.500000 0.000000 0.000000 0.500000 1.000000 0.000000 0.000000 0.000000 0.500000 0.000000 0.000000 0.500000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 Consensus sequence: TTATWAWCTAA ************************************************************************ Best Matches for Motif ID 17 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0683.1 POU4F2 Reverse Complement Reverse Complement Forward 2 11 0.067295 Taxon: Vertebrates Original motif 0.458603 0.147430 0.237304 0.156664 0.036172 0.039790 0.017428 0.906610 0.051494 0.009072 0.917823 0.021612 0.318857 0.679219 0.000550 0.001374 0.993226 0.001935 0.001290 0.003548 0.000353 0.000000 0.000000 0.999647 0.914094 0.002751 0.004280 0.078875 0.750358 0.023476 0.015173 0.210993 0.026270 0.018666 0.009679 0.945385 0.101672 0.003010 0.002676 0.892642 0.907174 0.007613 0.068521 0.016691 0.995938 0.001250 0.002812 0.000000 0.006600 0.010420 0.023967 0.959014 0.036486 0.047151 0.615493 0.300870 0.806815 0.060813 0.070511 0.061861 0.162346 0.148506 0.626538 0.062610 Consensus sequence: DTGCATAATTAATGAG Reverse complement motif 0.162346 0.626538 0.148506 0.062610 0.061861 0.060813 0.070511 0.806815 0.036486 0.615493 0.047151 0.300870 0.959014 0.010420 0.023967 0.006600 0.000000 0.001250 0.002812 0.995938 0.016691 0.007613 0.068521 0.907174 0.892642 0.003010 0.002676 0.101672 0.945385 0.018666 0.009679 0.026270 0.210993 0.023476 0.015173 0.750358 0.078875 0.002751 0.004280 0.914094 0.999647 0.000000 0.000000 0.000353 0.003548 0.001935 0.001290 0.993226 0.318857 0.000550 0.679219 0.001374 0.051494 0.917823 0.009072 0.021612 0.906610 0.039790 0.017428 0.036172 0.156664 0.147430 0.237304 0.458603 Consensus sequence: CTCATTAATTATGCAD Alignment: CTCATTAATTATGCAD -TTATWAWCTAA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 18 Motif name: Motif 18 Original motif 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.500000 0.000000 0.000000 0.500000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.500000 0.000000 0.000000 0.500000 1.000000 0.000000 0.000000 0.000000 Consensus sequence: TTCWTAGATTAWA Reserve complement motif 0.000000 0.000000 0.000000 1.000000 0.500000 0.000000 0.000000 0.500000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.500000 0.000000 0.000000 0.500000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 Consensus sequence: TWTAATCTAWGAA ************************************************************************ Best Matches for Motif ID 18 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0731.1 BCL6B Reverse Complement Original Motif Backward 5 13 0.070673 Taxon: Vertebrates Original motif 0.000000 0.084071 0.000000 0.915929 0.015789 0.000000 0.978947 0.005263 0.000000 0.994580 0.000000 0.005420 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.009346 0.990654 0.000000 1.000000 0.000000 0.000000 0.000000 0.046154 0.130769 0.823077 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.993127 0.000000 0.006873 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.009217 0.000000 0.990783 0.000000 0.070485 0.000000 0.929515 0.309589 0.665753 0.024658 0.000000 0.544643 0.434524 0.020833 0.000000 Consensus sequence: TGCTTTCTAGGAATTCM Reverse complement motif 0.000000 0.434524 0.020833 0.544643 0.309589 0.024658 0.665753 0.000000 0.929515 0.070485 0.000000 0.000000 0.990783 0.009217 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.006873 0.993127 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.823077 0.046154 0.130769 0.000000 0.000000 0.000000 1.000000 0.000000 0.990654 0.000000 0.009346 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.994580 0.005420 0.015789 0.978947 0.000000 0.005263 0.915929 0.084071 0.000000 0.000000 Consensus sequence: YGAATTCCTAGAAAGCA Alignment: TGCTTTCTAGGAATTCM TWTAATCTAWGAA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 19 Motif name: Motif 19 Original motif 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.500000 0.500000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 Consensus sequence: TTMAAAGATTT Reserve complement motif 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.500000 0.000000 0.500000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 Consensus sequence: AAATCTTTYAA ************************************************************************ Best Matches for Motif ID 19 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0731.1 BCL6B Original Motif Original Motif Forward 5 11 0.049225 Taxon: Vertebrates Original motif 0.000000 0.084071 0.000000 0.915929 0.015789 0.000000 0.978947 0.005263 0.000000 0.994580 0.000000 0.005420 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.009346 0.990654 0.000000 1.000000 0.000000 0.000000 0.000000 0.046154 0.130769 0.823077 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.993127 0.000000 0.006873 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.009217 0.000000 0.990783 0.000000 0.070485 0.000000 0.929515 0.309589 0.665753 0.024658 0.000000 0.544643 0.434524 0.020833 0.000000 Consensus sequence: TGCTTTCTAGGAATTCM Reverse complement motif 0.000000 0.434524 0.020833 0.544643 0.309589 0.024658 0.665753 0.000000 0.929515 0.070485 0.000000 0.000000 0.990783 0.009217 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.006873 0.993127 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.823077 0.046154 0.130769 0.000000 0.000000 0.000000 1.000000 0.000000 0.990654 0.000000 0.009346 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.994580 0.005420 0.015789 0.978947 0.000000 0.005263 0.915929 0.084071 0.000000 0.000000 Consensus sequence: YGAATTCCTAGAAAGCA Alignment: TGCTTTCTAGGAATTCM ----TTMAAAGATTT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Results created by MOTIFSIM on 11-20-2023 13:26:32 Runtime: 48.281799 seconds MOTIFSIM is written by Ngoc Tam L. 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