**************************************************************************************************************************************************************************************************** MOTIFSIM - Motif Similarity Detection Tool Version 2.2 **************************************************************************************************************************************************************************************************** INPUT **************************************************************************************************************************************************************************************************** Input Parameters Number of files: 2 Number of top significant motifs: 5 Number of best matches: 5 Similarity cutoff: >= 0.75 Matching motif database: Jaspar Core Motif tree: No Combined similar motifs: No Output file type: All Output file format: Text Input files and motif counts File name Count of motifs Dataset # U20231120-demo1.txt 20 1 U20231120-demo2.txt 45 2 **************************************************************************************************************************************************************************************************** RESULTS **************************************************************************************************************************************************************************************************** ********************************************************************** Best Matches in Database for Each Motif (Highest to Lowest) ***************************************************************** Dataset #: 1 Motif ID: 1 Motif name: Motif 1 Consensus sequence (original motif): RGRAGARRGARRAR Consensus sequence (reverse complement motif): MTMMTCMMTCTKCK ************************************************************************ Best Matches for Motif ID 1 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0528.1 ZNF263 Original Motif Original Motif Forward 3 14 0.00563526 Taxon: Vertebrates Consensus sequence (original motif): GGAGGAGGRRGRGGRGGRRGR Consensus sequence (reverse complement motif): KCMKCCKCCMCMKCCTCCTCC Alignment: GGAGGAGGRRGRGGRGGRRGR --RGRAGARRGARRAR----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0045.1 HMG-I/Y Original Motif Original Motif Backward 2 14 0.0313334 Taxon: Plants Consensus sequence (original motif): VWAVAAAHGVMAAMAY Consensus sequence (reverse complement motif): KTYTTYVCHTTTVTWV Alignment: VWAVAAAHGVMAAMAY -RGRAGARRGARRAR- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0543.1 eor-1 Original Motif Original Motif Backward 1 14 0.037736 Taxon: Nematodes Consensus sequence (original motif): DRAGAGAVRSAGAGA Consensus sequence (reverse complement motif): TCTCTSMVTCTCTMD Alignment: DRAGAGAVRSAGAGA -RGRAGARRGARRAR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0139.1 CTCF Original Motif Original Motif Forward 6 14 0.0462082 Taxon: Vertebrates Consensus sequence (original motif): YDRCCASYAGRKGGCRSYV Consensus sequence (reverse complement motif): BMSMGCCYMCTKSTGGMHM Alignment: YDRCCASYAGRKGGCRSYV -----RGRAGARRGARRAR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0555.1 SVP Original Motif Original Motif Backward 1 14 0.0500427 Taxon: Plants Consensus sequence (original motif): VWWHCCAAAAADGGAAARAH Consensus sequence (reverse complement motif): HTMTTTCCDTTTTTGGHWWB Alignment: VWWHCCAAAAADGGAAARAH ------RGRAGARRGARRAR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 2 Motif name: Motif 2 Consensus sequence (original motif): AWAAAWTWAAASWA Consensus sequence (reverse complement motif): TWSTTTWAWTTTWT ************************************************************************ Best Matches for Motif ID 2 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0555.1 SVP Reverse Complement Reverse Complement Forward 1 14 0.024813 Taxon: Plants Consensus sequence (original motif): VWWHCCAAAAADGGAAARAH Consensus sequence (reverse complement motif): HTMTTTCCDTTTTTGGHWWB Alignment: HTMTTTCCDTTTTTGGHWWB TWSTTTWAWTTTWT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0554.1 SOC1 Original Motif Reverse Complement Forward 5 14 0.0288328 Taxon: Plants Consensus sequence (original motif): TTTYTYTTTYTYTYTYTTTYB Consensus sequence (reverse complement motif): VMAAAMAMAMAMAAAMAMAAA Alignment: VMAAAMAMAMAMAAAMAMAAA ----AWAAAWTWAAASWA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0558.1 FLC Reverse Complement Reverse Complement Forward 1 14 0.0358712 Taxon: Plants Consensus sequence (original motif): DDWWDCCVAAAATRGAAAGWH Consensus sequence (reverse complement motif): HWCTTTCKATTTTBGGDWWBD Alignment: HWCTTTCKATTTTBGGDWWBD TWSTTTWAWTTTWT------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0346.1 NHP6B Original Motif Reverse Complement Forward 5 14 0.0391335 Taxon: Fungi Consensus sequence (original motif): HHTHHHWATATATWWWRDDV Consensus sequence (reverse complement motif): BHDKWWWATATATWHHHAHH Alignment: BHDKWWWATATATWHHHAHH ----AWAAAWTWAAASWA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0050.2 IRF1 Reverse Complement Original Motif Forward 4 14 0.0398899 Taxon: Vertebrates Consensus sequence (original motif): HBBYASTTTCACTTTCDBTTT Consensus sequence (reverse complement motif): AAABDGAAAGTGAAASTMVHH Alignment: HBBYASTTTCACTTTCDBTTT ---TWSTTTWAWTTTWT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 3 Motif name: Motif 3 Consensus sequence (original motif): AAAAWTTRCWT Consensus sequence (reverse complement motif): AWGKAAWTTTT ************************************************************************ Best Matches for Motif ID 3 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0390.1 STB3 Reverse Complement Original Motif Forward 2 11 0.0463699 Taxon: Fungi Consensus sequence (original motif): GBYHAAAWTTTTTCACTBHDD Consensus sequence (reverse complement motif): HHHBAGTGAAAAAWTTTDKVC Alignment: GBYHAAAWTTTTTCACTBHDD -AWGKAAWTTTT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0378.1 SFP1 Original Motif Original Motif Forward 7 11 0.0523082 Taxon: Fungi Consensus sequence (original motif): DHDDDRAAAAWTTTTYYHBDD Consensus sequence (reverse complement motif): HHBHMKAAAAWTTTTKDHDHD Alignment: DHDDDRAAAAWTTTTYYHBDD ------AAAAWTTRCWT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0573.1 ATHB-9 Reverse Complement Reverse Complement Backward 7 11 0.0676126 Taxon: Plants Consensus sequence (original motif): HDHHGTAATGATTRCDYBS Consensus sequence (reverse complement motif): SBKDGKAATCATTACDHBH Alignment: SBKDGKAATCATTACDHBH --AWGKAAWTTTT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0377.1 SFL1 Reverse Complement Reverse Complement Backward 11 11 0.0697628 Taxon: Fungi Consensus sequence (original motif): HHVHDHATMGAAGAAAHDWDW Consensus sequence (reverse complement motif): WDWDHTTTCTTCYATHHHVHH Alignment: WDWDHTTTCTTCYATHHHVHH AWGKAAWTTTT---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0791.1 POU4F3 Original Motif Reverse Complement Backward 1 11 0.0714694 Taxon: Vertebrates Consensus sequence (original motif): DTGMATWATTAATGHV Consensus sequence (reverse complement motif): VHCATTAATWATRCAD Alignment: VHCATTAATWATRCAD -----AAAAWTTRCWT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 4 Motif name: Motif 4 Consensus sequence (original motif): AWTAAATAYAATTT Consensus sequence (reverse complement motif): AAATTKTATTTAWT ************************************************************************ Best Matches for Motif ID 4 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0869.1 Sox11 Reverse Complement Reverse Complement Forward 2 14 0.0734794 Taxon: Vertebrates Consensus sequence (original motif): AACAATTKCAGTGTT Consensus sequence (reverse complement motif): AACACTGRAATTGTT Alignment: AACACTGRAATTGTT -AAATTKTATTTAWT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0867.1 SOX4 Reverse Complement Reverse Complement Forward 2 14 0.0743815 Taxon: Vertebrates Consensus sequence (original motif): DAACAATTGCAGTGTT Consensus sequence (reverse complement motif): AACACTGCAATTGTTH Alignment: AACACTGCAATTGTTH -AAATTKTATTTAWT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0378.1 SFP1 Reverse Complement Reverse Complement Backward 1 14 0.0787324 Taxon: Fungi Consensus sequence (original motif): DHDDDRAAAAWTTTTYYHBDD Consensus sequence (reverse complement motif): HHBHMKAAAAWTTTTKDHDHD Alignment: HHBHMKAAAAWTTTTKDHDHD -------AAATTKTATTTAWT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0386.1 SPT15 Original Motif Reverse Complement Forward 5 14 0.0787361 Taxon: Fungi Consensus sequence (original motif): VHHHAGDWATATATATDSVHD Consensus sequence (reverse complement motif): DHVSDATATATATWDCTHDHV Alignment: DHVSDATATATATWDCTHDHV ----AWTAAATAYAATTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0866.1 SOX21 Original Motif Original Motif Forward 1 14 0.0801722 Taxon: Vertebrates Consensus sequence (original motif): AACAATKKYAGTGTT Consensus sequence (reverse complement motif): AACACTMYYATTGTT Alignment: AACAATKKYAGTGTT AWTAAATAYAATTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 5 Motif name: Motif 5 Consensus sequence (original motif): AATTYDGAARTAWW Consensus sequence (reverse complement motif): WWTAKTTCDKAATT ************************************************************************ Best Matches for Motif ID 5 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0400.1 SUT2 Reverse Complement Reverse Complement Backward 7 14 0.0872945 Taxon: Fungi Consensus sequence (original motif): HDDHHRAACTCCGAAHHDBD Consensus sequence (reverse complement motif): DVDHHTTCGGAGTTKHHHDH Alignment: DVDHHTTCGGAGTTKHHHDH WWTAKTTCDKAATT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0377.1 SFL1 Original Motif Original Motif Backward 5 14 0.0893001 Taxon: Fungi Consensus sequence (original motif): HHVHDHATMGAAGAAAHDWDW Consensus sequence (reverse complement motif): WDWDHTTTCTTCYATHHHVHH Alignment: HHVHDHATMGAAGAAAHDWDW ---AATTYDGAARTAWW---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0495.1 MAFF Original Motif Original Motif Forward 4 14 0.0903686 Taxon: Vertebrates Consensus sequence (original motif): BCTDASTCAGCADWWTHH Consensus sequence (reverse complement motif): HHAWWDTGCTGASTHAGB Alignment: BCTDASTCAGCADWWTHH ---AATTYDGAARTAWW- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0533.1 su(Hw) Reverse Complement Reverse Complement Forward 2 14 0.0926859 Taxon: Insects Consensus sequence (original motif): GCCBAAAAGTATGCWAYRHWW Consensus sequence (reverse complement motif): WWHKKTWGCATACTTTTBGGC Alignment: WWHKKTWGCATACTTTTBGGC -WWTAKTTCDKAATT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0415.1 YAP1 Reverse Complement Original Motif Backward 5 14 0.0941066 Taxon: Fungi Consensus sequence (original motif): HBDDDMTTACGTAAKVHHVH Consensus sequence (reverse complement motif): HVDHVYTTACGTAARHDDVH Alignment: HBDDDMTTACGTAAKVHHVH --WWTAKTTCDKAATT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 6 Motif name: Motif 6 Consensus sequence (original motif): CSKCCCCGCCCCSY Consensus sequence (reverse complement motif): MSGGGGCGGGGYSG ************************************************************************ Best Matches for Motif ID 6 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0685.1 SP4 Original Motif Original Motif Backward 3 14 0.0325695 Taxon: Vertebrates Consensus sequence (original motif): BWRGCCACGCCCMCTYH Consensus sequence (reverse complement motif): HMAGRGGGCGTGGCKWV Alignment: BWRGCCACGCCCMCTYH -CSKCCCCGCCCCSY-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0657.1 KLF13 Reverse Complement Reverse Complement Backward 1 14 0.0403353 Taxon: Vertebrates Consensus sequence (original motif): DTGMCACGCCCCTTTTTG Consensus sequence (reverse complement motif): CAAAAAGGGGCGTGRCAD Alignment: CAAAAAGGGGCGTGRCAD ----MSGGGGCGGGGYSG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0162.2 EGR1 Original Motif Original Motif Forward 1 14 0.0584557 Taxon: Vertebrates Consensus sequence (original motif): BCBCCGCCCCCGCV Consensus sequence (reverse complement motif): VGCGGGGGCGGBGB Alignment: BCBCCGCCCCCGCV CSKCCCCGCCCCSY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0395.1 STP2 Reverse Complement Original Motif Forward 4 14 0.0591537 Taxon: Fungi Consensus sequence (original motif): HVVHBGGCGCCGYRYVHHBH Consensus sequence (reverse complement motif): HBDHVKKKCGGCGCCBHBVH Alignment: HVVHBGGCGCCGYRYVHHBH ---MSGGGGCGGGGYSG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0516.1 SP2 Original Motif Original Motif Forward 2 14 0.0623372 Taxon: Vertebrates Consensus sequence (original motif): GYCCCGCCYCYBBBB Consensus sequence (reverse complement motif): BBBVKGKGGCGGGKC Alignment: GYCCCGCCYCYBBBB -CSKCCCCGCCCCSY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 7 Motif name: Motif 7 Consensus sequence (original motif): AAATRWTAAAATCA Consensus sequence (reverse complement motif): TGATTTTAWKATTT ************************************************************************ Best Matches for Motif ID 7 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0729.1 RARA Reverse Complement Reverse Complement Backward 2 14 0.078646 Taxon: Vertebrates Consensus sequence (original motif): GAGGTCAAAAGGTCAAKK Consensus sequence (reverse complement motif): YRTTGACCTTTTGACCTC Alignment: YRTTGACCTTTTGACCTC ---TGATTTTAWKATTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0859.1 Rarg Reverse Complement Reverse Complement Forward 2 14 0.0841021 Taxon: Vertebrates Consensus sequence (original motif): RAGGTCAAAAGGTCAH Consensus sequence (reverse complement motif): HTGACCTTTTGACCTK Alignment: HTGACCTTTTGACCTK -TGATTTTAWKATTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0857.1 Rarb Reverse Complement Reverse Complement Backward 3 14 0.0843848 Taxon: Vertebrates Consensus sequence (original motif): AAAGGTCAAAAGGTCA Consensus sequence (reverse complement motif): TGACCTTTTGACCTTT Alignment: TGACCTTTTGACCTTT TGATTTTAWKATTT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0517.1 STAT1::STAT2 Reverse Complement Original Motif Backward 2 14 0.0902938 Taxon: Vertebrates Consensus sequence (original motif): THAGTTTCDBTTTCY Consensus sequence (reverse complement motif): KGAAAVDGAAACTDA Alignment: THAGTTTCDBTTTCY TGATTTTAWKATTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0050.2 IRF1 Original Motif Reverse Complement Backward 3 14 0.0918712 Taxon: Vertebrates Consensus sequence (original motif): HBBYASTTTCACTTTCDBTTT Consensus sequence (reverse complement motif): AAABDGAAAGTGAAASTMVHH Alignment: AAABDGAAAGTGAAASTMVHH -----AAATRWTAAAATCA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 8 Motif name: Motif 8 Consensus sequence (original motif): AATHATATWTHAAA Consensus sequence (reverse complement motif): TTTDAWATATHATT ************************************************************************ Best Matches for Motif ID 8 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0345.1 NHP6A Reverse Complement Reverse Complement Forward 5 14 0.045914 Taxon: Fungi Consensus sequence (original motif): VHDHHYWHTATATAADDDHDH Consensus sequence (reverse complement motif): HHHDDDTTATATAHWKDHHHB Alignment: HHHDDDTTATATAHWKDHHHB ----TTTDAWATATHATT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0346.1 NHP6B Original Motif Original Motif Forward 4 14 0.0516885 Taxon: Fungi Consensus sequence (original motif): HHTHHHWATATATWWWRDDV Consensus sequence (reverse complement motif): BHDKWWWATATATWHHHAHH Alignment: HHTHHHWATATATWWWRDDV ---AATHATATWTHAAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0050.2 IRF1 Original Motif Reverse Complement Backward 7 14 0.0598286 Taxon: Vertebrates Consensus sequence (original motif): HBBYASTTTCACTTTCDBTTT Consensus sequence (reverse complement motif): AAABDGAAAGTGAAASTMVHH Alignment: AAABDGAAAGTGAAASTMVHH -AATHATATWTHAAA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0001.2 AGL3 Reverse Complement Original Motif Forward 3 14 0.0606281 Taxon: Plants Consensus sequence (original motif): VDTHCCAWWWATAGDWHB Consensus sequence (reverse complement motif): BHWDCTATWWWTGGHADV Alignment: VDTHCCAWWWATAGDWHB --TTTDAWATATHATT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0383.1 SMP1 Reverse Complement Reverse Complement Forward 6 14 0.0618198 Taxon: Fungi Consensus sequence (original motif): BDACCTWTAATTAWAHBWVVD Consensus sequence (reverse complement motif): DVVWVHTWTAATTAWAGGTDV Alignment: DVVWVHTWTAATTAWAGGTDV -----TTTDAWATATHATT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 9 Motif name: Motif 9 Consensus sequence (original motif): TTTCATAAWT Consensus sequence (reverse complement motif): AWTTATGAAA ************************************************************************ Best Matches for Motif ID 9 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0683.1 POU4F2 Reverse Complement Reverse Complement Forward 7 10 0.0571343 Taxon: Vertebrates Consensus sequence (original motif): DTGCATAATTAATGAG Consensus sequence (reverse complement motif): CTCATTAATTATGCAD Alignment: CTCATTAATTATGCAD ------AWTTATGAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0102.3 CEBPA Original Motif Original Motif Backward 1 10 0.0573809 Taxon: Vertebrates Consensus sequence (original motif): ATTGCAYAAYH Consensus sequence (reverse complement motif): HMTTKTGCAAT Alignment: ATTGCAYAAYH -TTTCATAAWT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0547.1 skn-1 Original Motif Reverse Complement Forward 4 10 0.0590786 Taxon: Nematodes Consensus sequence (original motif): AAAATGATGACAAWD Consensus sequence (reverse complement motif): DWTTGTCATCATTTT Alignment: DWTTGTCATCATTTT ---TTTCATAAWT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0843.1 TEF Original Motif Original Motif Forward 3 10 0.0640129 Taxon: Vertebrates Consensus sequence (original motif): BRTTACRTAAYV Consensus sequence (reverse complement motif): BKTTAMGTAAKV Alignment: BRTTACRTAAYV --TTTCATAAWT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0415.1 YAP1 Reverse Complement Reverse Complement Backward 7 10 0.0643778 Taxon: Fungi Consensus sequence (original motif): HBDDDMTTACGTAAKVHHVH Consensus sequence (reverse complement motif): HVDHVYTTACGTAARHDDVH Alignment: HVDHVYTTACGTAARHDDVH ----AWTTATGAAA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 10 Motif name: Motif 10 Consensus sequence (original motif): ATTTWATGAAA Consensus sequence (reverse complement motif): TTTCATWAAAT ************************************************************************ Best Matches for Motif ID 10 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0906.1 HOXC12 Original Motif Reverse Complement Backward 1 11 0.0786043 Taxon: Vertebrates Consensus sequence (original motif): RGTCGTAAAAH Consensus sequence (reverse complement motif): HTTTTACGACM Alignment: HTTTTACGACM ATTTWATGAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0651.1 HOXC11 Original Motif Reverse Complement Backward 1 11 0.079127 Taxon: Vertebrates Consensus sequence (original motif): DGTCGTAAAAH Consensus sequence (reverse complement motif): HTTTTACGACH Alignment: DGTCGTAAAAH ATTTWATGAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0731.1 BCL6B Original Motif Reverse Complement Forward 4 11 0.0814831 Taxon: Vertebrates Consensus sequence (original motif): TGCTTTCTAGGAATTCM Consensus sequence (reverse complement motif): YGAATTCCTAGAAAGCA Alignment: YGAATTCCTAGAAAGCA ---ATTTWATGAAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0907.1 HOXC13 Reverse Complement Original Motif Backward 1 11 0.0832456 Taxon: Vertebrates Consensus sequence (original motif): BCTCGTAAAAH Consensus sequence (reverse complement motif): HTTTTACGAGB Alignment: BCTCGTAAAAH TTTCATWAAAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0911.1 Hoxa11 Original Motif Reverse Complement Backward 1 11 0.0834977 Taxon: Vertebrates Consensus sequence (original motif): DGTCGTAAAAHD Consensus sequence (reverse complement motif): DHTTTTACGACH Alignment: DHTTTTACGACH -ATTTWATGAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 11 Motif name: Motif 11 Consensus sequence (original motif): AAAACAAA Consensus sequence (reverse complement motif): TTTGTTTT ************************************************************************ Best Matches for Motif ID 11 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0481.1 FOXP1 Original Motif Original Motif Forward 7 8 0.0249742 Taxon: Vertebrates Consensus sequence (original motif): HHDADGTAAACAAAV Consensus sequence (reverse complement motif): VTTTGTTTACDTDHD Alignment: HHDADGTAAACAAAV ------AAAACAAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0296.1 FKH1 Original Motif Original Motif Backward 6 8 0.0269327 Taxon: Fungi Consensus sequence (original motif): BDWWWTGTAAACAAAVDDDV Consensus sequence (reverse complement motif): BHHDVTTTGTTTACAWWWHV Alignment: BDWWWTGTAAACAAAVDDDV -------AAAACAAA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0514.1 Sox3 Original Motif Reverse Complement Backward 3 8 0.0274893 Taxon: Vertebrates Consensus sequence (original motif): CCTTTGTYYY Consensus sequence (reverse complement motif): MMMACAAAGG Alignment: MMMACAAAGG AAAACAAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0852.1 Foxk1 Original Motif Original Motif Backward 4 8 0.034209 Taxon: Vertebrates Consensus sequence (original motif): DDAATGTAAACAAAVVB Consensus sequence (reverse complement motif): BBVTTTGTTTACATTDD Alignment: DDAATGTAAACAAAVVB ------AAAACAAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0851.1 Foxj3 Original Motif Original Motif Backward 4 8 0.0387057 Taxon: Vertebrates Consensus sequence (original motif): HDHADGTAAACAAAVVH Consensus sequence (reverse complement motif): DBVTTTGTTTACDTHDH Alignment: HDHADGTAAACAAAVVH ------AAAACAAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 12 Motif name: Motif 12 Consensus sequence (original motif): AAAGATTT Consensus sequence (reverse complement motif): AAATCTTT ************************************************************************ Best Matches for Motif ID 12 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0435.1 YPR015C Original Motif Reverse Complement Backward 10 8 0.0240145 Taxon: Fungi Consensus sequence (original motif): TBDHDACGTAAATCMTDDHH Consensus sequence (reverse complement motif): HDDDARGATTTACGTHHDBA Alignment: HDDDARGATTTACGTHHDBA ---AAAGATTT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0679.1 ONECUT1 Original Motif Reverse Complement Backward 4 8 0.0257538 Taxon: Vertebrates Consensus sequence (original motif): VAAAAATCRATAHH Consensus sequence (reverse complement motif): HHTATMGATTTTTB Alignment: HHTATMGATTTTTB ---AAAGATTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0756.1 ONECUT2 Original Motif Reverse Complement Forward 4 8 0.0273457 Taxon: Vertebrates Consensus sequence (original motif): VAAAAATCRATAHH Consensus sequence (reverse complement motif): HHTATMGATTTTTB Alignment: HHTATMGATTTTTB ---AAAGATTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0573.1 ATHB-9 Original Motif Original Motif Forward 7 8 0.0329327 Taxon: Plants Consensus sequence (original motif): HDHHGTAATGATTRCDYBS Consensus sequence (reverse complement motif): SBKDGKAATCATTACDHBH Alignment: HDHHGTAATGATTRCDYBS ------AAAGATTT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0378.1 SFP1 Original Motif Original Motif Forward 7 8 0.0332736 Taxon: Fungi Consensus sequence (original motif): DHDDDRAAAAWTTTTYYHBDD Consensus sequence (reverse complement motif): HHBHMKAAAAWTTTTKDHDHD Alignment: DHDDDRAAAAWTTTTYYHBDD ------AAAGATTT------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 13 Motif name: Motif 13 Consensus sequence (original motif): AWAAATAA Consensus sequence (reverse complement motif): TTATTTWT ************************************************************************ Best Matches for Motif ID 13 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0052.3 MEF2A Original Motif Original Motif Backward 2 8 0 Taxon: Vertebrates Consensus sequence (original motif): KCTAWAAATAGM Consensus sequence (reverse complement motif): YCTATTTWTAGR Alignment: KCTAWAAATAGM ---AWAAATAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0773.1 MEF2D Original Motif Original Motif Forward 4 8 7.79237e-05 Taxon: Vertebrates Consensus sequence (original motif): DCTAWAAATAGM Consensus sequence (reverse complement motif): YCTATTTWTAGD Alignment: DCTAWAAATAGM ---AWAAATAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0660.1 MEF2B Original Motif Original Motif Backward 2 8 0.0035733 Taxon: Vertebrates Consensus sequence (original motif): RCTAWAAATAGC Consensus sequence (reverse complement motif): GCTATTTWTAGM Alignment: RCTAWAAATAGC ---AWAAATAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0497.1 MEF2C Original Motif Original Motif Backward 3 8 0.0167824 Taxon: Vertebrates Consensus sequence (original motif): DDDCYAAAAATAGMH Consensus sequence (reverse complement motif): HYCTATTTTTMGHDD Alignment: DDDCYAAAAATAGMH -----AWAAATAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0683.1 POU4F2 Original Motif Original Motif Forward 5 8 0.0276832 Taxon: Vertebrates Consensus sequence (original motif): DTGCATAATTAATGAG Consensus sequence (reverse complement motif): CTCATTAATTATGCAD Alignment: DTGCATAATTAATGAG ----AWAAATAA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 14 Motif name: Motif 14 Consensus sequence (original motif): ATMACAATAAAA Consensus sequence (reverse complement motif): TTTTATTGTYAT ************************************************************************ Best Matches for Motif ID 14 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0050.2 IRF1 Reverse Complement Original Motif Forward 7 12 0.101031 Taxon: Vertebrates Consensus sequence (original motif): HBBYASTTTCACTTTCDBTTT Consensus sequence (reverse complement motif): AAABDGAAAGTGAAASTMVHH Alignment: HBBYASTTTCACTTTCDBTTT ------TTTTATTGTYAT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0497.1 MEF2C Original Motif Original Motif Forward 4 12 0.103068 Taxon: Vertebrates Consensus sequence (original motif): DDDCYAAAAATAGMH Consensus sequence (reverse complement motif): HYCTATTTTTMGHDD Alignment: DDDCYAAAAATAGMH ---ATMACAATAAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0029.1 Mecom Reverse Complement Reverse Complement Backward 1 12 0.106096 Taxon: Vertebrates Consensus sequence (original motif): AAGAYAAGATAABA Consensus sequence (reverse complement motif): TBTTATCTTMTCTT Alignment: TBTTATCTTMTCTT --TTTTATTGTYAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0314.1 HAP3 Original Motif Reverse Complement Backward 1 12 0.106236 Taxon: Fungi Consensus sequence (original motif): TCTSATTGGYYVRRA Consensus sequence (reverse complement motif): TMKVMMCCAATSAGA Alignment: TCTSATTGGYYVRRA ---ATMACAATAAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0070.1 PBX1 Reverse Complement Reverse Complement Forward 1 12 0.106481 Taxon: Vertebrates Consensus sequence (original motif): HBATCAATCAAW Consensus sequence (reverse complement motif): WTTGATTGATBD Alignment: WTTGATTGATBD TTTTATTGTYAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 15 Motif name: Motif 15 Consensus sequence (original motif): ACAAWTRATTTTGA Consensus sequence (reverse complement motif): TCAAAATKAWTTGT ************************************************************************ Best Matches for Motif ID 15 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0868.1 SOX8 Reverse Complement Original Motif Backward 2 14 0.0986809 Taxon: Vertebrates Consensus sequence (original motif): AACAATRTGCAGTGTT Consensus sequence (reverse complement motif): AACACTGCAMATTGTT Alignment: AACAATRTGCAGTGTT -TCAAAATKAWTTGT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0009.2 T Reverse Complement Reverse Complement Backward 3 14 0.10538 Taxon: Vertebrates Consensus sequence (original motif): TCACACVTABGTGTGA Consensus sequence (reverse complement motif): TCACACBTAVGTGTGA Alignment: TCACACBTAVGTGTGA TCAAAATKAWTTGT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0757.1 ONECUT3 Original Motif Reverse Complement Backward 1 14 0.105928 Taxon: Vertebrates Consensus sequence (original motif): VAAAAATCRATAAH Consensus sequence (reverse complement motif): HTTATKGATTTTTB Alignment: VAAAAATCRATAAH ACAAWTRATTTTGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0804.1 TBX19 Reverse Complement Reverse Complement Backward 5 14 0.108377 Taxon: Vertebrates Consensus sequence (original motif): DTTMRCACVTABGTGTGAAH Consensus sequence (reverse complement motif): HTTCACACBTAVGTGKRAAD Alignment: HTTCACACBTAVGTGKRAAD --TCAAAATKAWTTGT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0390.1 STB3 Reverse Complement Reverse Complement Backward 2 14 0.113945 Taxon: Fungi Consensus sequence (original motif): GBYHAAAWTTTTTCACTBHDD Consensus sequence (reverse complement motif): HHHBAGTGAAAAAWTTTDKVC Alignment: HHHBAGTGAAAAAWTTTDKVC ------TCAAAATKAWTTGT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 16 Motif name: Motif 16 Consensus sequence (original motif): AAAAATGAAT Consensus sequence (reverse complement motif): ATTCATTTTT ************************************************************************ Best Matches for Motif ID 16 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0757.1 ONECUT3 Reverse Complement Reverse Complement Backward 2 10 0.0366805 Taxon: Vertebrates Consensus sequence (original motif): VAAAAATCRATAAH Consensus sequence (reverse complement motif): HTTATKGATTTTTB Alignment: HTTATKGATTTTTB ---ATTCATTTTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0756.1 ONECUT2 Original Motif Original Motif Backward 4 10 0.0499406 Taxon: Vertebrates Consensus sequence (original motif): VAAAAATCRATAHH Consensus sequence (reverse complement motif): HHTATMGATTTTTB Alignment: VAAAAATCRATAHH -AAAAATGAAT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0679.1 ONECUT1 Original Motif Original Motif Backward 4 10 0.0503311 Taxon: Vertebrates Consensus sequence (original motif): VAAAAATCRATAHH Consensus sequence (reverse complement motif): HHTATMGATTTTTB Alignment: VAAAAATCRATAHH -AAAAATGAAT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0559.1 PI Reverse Complement Reverse Complement Backward 4 10 0.0592661 Taxon: Plants Consensus sequence (original motif): CCAAAARWRGAAAR Consensus sequence (reverse complement motif): KTTTCMWKTTTTGG Alignment: KTTTCMWKTTTTGG -ATTCATTTTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0050.2 IRF1 Reverse Complement Original Motif Forward 7 10 0.061014 Taxon: Vertebrates Consensus sequence (original motif): HBBYASTTTCACTTTCDBTTT Consensus sequence (reverse complement motif): AAABDGAAAGTGAAASTMVHH Alignment: HBBYASTTTCACTTTCDBTTT ------ATTCATTTTT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 17 Motif name: Motif 17 Consensus sequence (original motif): TTAGWTWATAA Consensus sequence (reverse complement motif): TTATWAWCTAA ************************************************************************ Best Matches for Motif ID 17 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0683.1 POU4F2 Reverse Complement Reverse Complement Forward 2 11 0.0672954 Taxon: Vertebrates Consensus sequence (original motif): DTGCATAATTAATGAG Consensus sequence (reverse complement motif): CTCATTAATTATGCAD Alignment: CTCATTAATTATGCAD -TTATWAWCTAA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0046.2 HNF1A Reverse Complement Reverse Complement Backward 3 11 0.0732764 Taxon: Vertebrates Consensus sequence (original motif): DRTTAATVATTAACH Consensus sequence (reverse complement motif): HGTTAATVATTAAMD Alignment: HGTTAATVATTAAMD --TTATWAWCTAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0153.2 HNF1B Reverse Complement Reverse Complement Backward 2 11 0.0744631 Taxon: Vertebrates Consensus sequence (original motif): GTTAATVATTAAY Consensus sequence (reverse complement motif): KTTAATVATTAAC Alignment: KTTAATVATTAAC -TTATWAWCTAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0296.1 FKH1 Reverse Complement Original Motif Backward 6 11 0.074709 Taxon: Fungi Consensus sequence (original motif): BDWWWTGTAAACAAAVDDDV Consensus sequence (reverse complement motif): BHHDVTTTGTTTACAWWWHV Alignment: BDWWWTGTAAACAAAVDDDV ----TTATWAWCTAA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0135.1 Lhx3 Reverse Complement Original Motif Forward 1 11 0.075 Taxon: Vertebrates Consensus sequence (original motif): WAATTAATTAWYB Consensus sequence (reverse complement motif): BMWTAATTAATTW Alignment: WAATTAATTAWYB TTATWAWCTAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 18 Motif name: Motif 18 Consensus sequence (original motif): TTCWTAGATTAWA Consensus sequence (reverse complement motif): TWTAATCTAWGAA ************************************************************************ Best Matches for Motif ID 18 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0731.1 BCL6B Reverse Complement Original Motif Backward 5 13 0.0706727 Taxon: Vertebrates Consensus sequence (original motif): TGCTTTCTAGGAATTCM Consensus sequence (reverse complement motif): YGAATTCCTAGAAAGCA Alignment: TGCTTTCTAGGAATTCM TWTAATCTAWGAA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0756.1 ONECUT2 Original Motif Reverse Complement Forward 1 13 0.0747964 Taxon: Vertebrates Consensus sequence (original motif): VAAAAATCRATAHH Consensus sequence (reverse complement motif): HHTATMGATTTTTB Alignment: VAAAAATCRATAHH TTCWTAGATTAWA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0683.1 POU4F2 Original Motif Reverse Complement Forward 1 13 0.0766449 Taxon: Vertebrates Consensus sequence (original motif): DTGCATAATTAATGAG Consensus sequence (reverse complement motif): CTCATTAATTATGCAD Alignment: DTGCATAATTAATGAG TTCWTAGATTAWA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0679.1 ONECUT1 Original Motif Reverse Complement Forward 1 13 0.0773773 Taxon: Vertebrates Consensus sequence (original motif): VAAAAATCRATAHH Consensus sequence (reverse complement motif): HHTATMGATTTTTB Alignment: HHTATMGATTTTTB TTCWTAGATTAWA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0407.1 THI2 Original Motif Reverse Complement Forward 2 13 0.0791413 Taxon: Fungi Consensus sequence (original motif): GGMAACYSWAAGARC Consensus sequence (reverse complement motif): GKTCTTWSMGTTYCC Alignment: GKTCTTWSMGTTYCC -TTCWTAGATTAWA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 19 Motif name: Motif 19 Consensus sequence (original motif): TTMAAAGATTT Consensus sequence (reverse complement motif): AAATCTTTYAA ************************************************************************ Best Matches for Motif ID 19 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0731.1 BCL6B Original Motif Original Motif Forward 5 11 0.0492255 Taxon: Vertebrates Consensus sequence (original motif): TGCTTTCTAGGAATTCM Consensus sequence (reverse complement motif): YGAATTCCTAGAAAGCA Alignment: TGCTTTCTAGGAATTCM ----TTMAAAGATTT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0390.1 STB3 Reverse Complement Original Motif Forward 6 11 0.053648 Taxon: Fungi Consensus sequence (original motif): GBYHAAAWTTTTTCACTBHDD Consensus sequence (reverse complement motif): HHHBAGTGAAAAAWTTTDKVC Alignment: GBYHAAAWTTTTTCACTBHDD -----AAATCTTTYAA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0435.1 YPR015C Original Motif Reverse Complement Backward 10 11 0.0560869 Taxon: Fungi Consensus sequence (original motif): TBDHDACGTAAATCMTDDHH Consensus sequence (reverse complement motif): HDDDARGATTTACGTHHDBA Alignment: HDDDARGATTTACGTHHDBA TTMAAAGATTT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0452.2 Kr Original Motif Reverse Complement Backward 4 11 0.0594262 Taxon: Insects Consensus sequence (original motif): BTYAACCCTTTBHB Consensus sequence (reverse complement motif): BHVAAAGGGTTMAV Alignment: BHVAAAGGGTTMAV TTMAAAGATTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0378.1 SFP1 Reverse Complement Original Motif Forward 8 11 0.0608143 Taxon: Fungi Consensus sequence (original motif): DHDDDRAAAAWTTTTYYHBDD Consensus sequence (reverse complement motif): HHBHMKAAAAWTTTTKDHDHD Alignment: DHDDDRAAAAWTTTTYYHBDD -------AAATCTTTYAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 1 Motif ID: 20 Motif name: Motif 20 Consensus sequence (original motif): ATAAAA Consensus sequence (reverse complement motif): TTTTAT ************************************************************************ Best Matches for Motif ID 20 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0465.1 CDX2 Original Motif Original Motif Backward 1 6 0.0152369 Taxon: Vertebrates Consensus sequence (original motif): VDGYMATAAAA Consensus sequence (reverse complement motif): TTTTATRKCDB Alignment: VDGYMATAAAA -----ATAAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0909.1 HOXD13 Original Motif Original Motif Backward 2 6 0.0174801 Taxon: Vertebrates Consensus sequence (original motif): CYMATAAAAH Consensus sequence (reverse complement motif): HTTTTATYKG Alignment: CYMATAAAAH ---ATAAAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0216.2 cad Original Motif Original Motif Forward 5 6 0.0183456 Taxon: Insects Consensus sequence (original motif): RGYMATAAAAM Consensus sequence (reverse complement motif): YTTTTATRKCM Alignment: RGYMATAAAAM ----ATAAAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0901.1 HOXB13 Reverse Complement Reverse Complement Forward 2 6 0.0202721 Taxon: Vertebrates Consensus sequence (original motif): CCAATAAAAH Consensus sequence (reverse complement motif): DTTTTATTGG Alignment: DTTTTATTGG -TTTTAT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0650.1 HOXA13 Reverse Complement Reverse Complement Forward 2 6 0.0269942 Taxon: Vertebrates Consensus sequence (original motif): CYAATAAAAH Consensus sequence (reverse complement motif): HTTTTATTKG Alignment: HTTTTATTKG -TTTTAT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 21 Motif name: Motif 21 Consensus sequence (original motif): CYTSCCTCTGC Consensus sequence (reverse complement motif): GCAGAGGSAKG ************************************************************************ Best Matches for Motif ID 21 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0159.1 RARA::RXRA Reverse Complement Original Motif Backward 4 11 0.0409566 Taxon: Vertebrates Consensus sequence (original motif): RGKTCABVVRGAGGTCA Consensus sequence (reverse complement motif): TGACCTCKVVBTGAYCK Alignment: RGKTCABVVRGAGGTCA ---GCAGAGGSAKG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0150.2 Nfe2l2 Reverse Complement Reverse Complement Backward 4 11 0.0440654 Taxon: Vertebrates Consensus sequence (original motif): HAVVATGACTCAGCA Consensus sequence (reverse complement motif): TGCTGAGTCATVVTD Alignment: TGCTGAGTCATVVTD -GCAGAGGSAKG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0697.1 ZIC3 Reverse Complement Reverse Complement Backward 3 11 0.0471296 Taxon: Vertebrates Consensus sequence (original motif): GACCCCCCGCTGYGH Consensus sequence (reverse complement motif): DCKCAGCGGGGGGTC Alignment: DCKCAGCGGGGGGTC --GCAGAGGSAKG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0751.1 ZIC4 Reverse Complement Reverse Complement Forward 3 11 0.0479683 Taxon: Vertebrates Consensus sequence (original motif): GRCCCCCCGCDGHGH Consensus sequence (reverse complement motif): DCHCDGCGGGGGGKC Alignment: DCHCDGCGGGGGGKC --GCAGAGGSAKG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0530.1 cnc::maf-S Reverse Complement Reverse Complement Forward 5 11 0.0495365 Taxon: Insects Consensus sequence (original motif): VATGACKBDGCAHWW Consensus sequence (reverse complement motif): WWHTGCHBRGTCATV Alignment: WWHTGCHBRGTCATV ----GCAGAGGSAKG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 22 Motif name: Motif 22 Consensus sequence (original motif): ACACACACACACAC Consensus sequence (reverse complement motif): GTGTGTGTGTGTGT ************************************************************************ Best Matches for Motif ID 22 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0538.1 daf-12 Reverse Complement Original Motif Forward 1 14 0.0365338 Taxon: Nematodes Consensus sequence (original motif): GWGYGTGTGTGYGTB Consensus sequence (reverse complement motif): BACKCACACACMCWC Alignment: GWGYGTGTGTGYGTB GTGTGTGTGTGTGT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0073.1 RREB1 Original Motif Original Motif Backward 2 14 0.0668264 Taxon: Vertebrates Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: CCCCMAAMCAMCCMCMMMCV -----ACACACACACACAC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0554.1 SOC1 Original Motif Reverse Complement Forward 5 14 0.0673813 Taxon: Plants Consensus sequence (original motif): TTTYTYTTTYTYTYTYTTTYB Consensus sequence (reverse complement motif): VMAAAMAMAMAMAAAMAMAAA Alignment: VMAAAMAMAMAMAAAMAMAAA ----ACACACACACACAC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0343.1 NDT80 Original Motif Original Motif Backward 1 14 0.0698112 Taxon: Fungi Consensus sequence (original motif): HHBHHKGMCACAAAAHCSVDV Consensus sequence (reverse complement motif): BDVSGHTTTTGTGRCYDDVHH Alignment: HHBHHKGMCACAAAAHCSVDV -------ACACACACACACAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0733.1 EGR4 Original Motif Original Motif Backward 1 14 0.0704777 Taxon: Vertebrates Consensus sequence (original motif): HHMCGCCCACGCAHHH Consensus sequence (reverse complement motif): HHHTGCGTGGGCGYHH Alignment: HHMCGCCCACGCAHHH --ACACACACACACAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 23 Motif name: Motif 23 Consensus sequence (original motif): HCAGRRVACASAG Consensus sequence (reverse complement motif): CTSTGTBKMCTGH ************************************************************************ Best Matches for Motif ID 23 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0481.1 FOXP1 Reverse Complement Reverse Complement Forward 1 13 0.0369816 Taxon: Vertebrates Consensus sequence (original motif): HHDADGTAAACAAAV Consensus sequence (reverse complement motif): VTTTGTTTACDTDHD Alignment: VTTTGTTTACDTDHD CTSTGTBKMCTGH-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0554.1 SOC1 Original Motif Reverse Complement Backward 8 13 0.0428796 Taxon: Plants Consensus sequence (original motif): TTTYTYTTTYTYTYTYTTTYB Consensus sequence (reverse complement motif): VMAAAMAMAMAMAAAMAMAAA Alignment: VMAAAMAMAMAMAAAMAMAAA -HCAGRRVACASAG------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0528.1 ZNF263 Original Motif Original Motif Forward 4 13 0.0438252 Taxon: Vertebrates Consensus sequence (original motif): GGAGGAGGRRGRGGRGGRRGR Consensus sequence (reverse complement motif): KCMKCCKCCMCMKCCTCCTCC Alignment: GGAGGAGGRRGRGGRGGRRGR ---HCAGRRVACASAG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0343.1 NDT80 Original Motif Original Motif Backward 7 13 0.0459228 Taxon: Fungi Consensus sequence (original motif): HHBHHKGMCACAAAAHCSVDV Consensus sequence (reverse complement motif): BDVSGHTTTTGTGRCYDDVHH Alignment: HHBHHKGMCACAAAAHCSVDV --HCAGRRVACASAG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0494.1 Nr1h3::Rxra Reverse Complement Reverse Complement Forward 1 13 0.0467375 Taxon: Vertebrates Consensus sequence (original motif): TGACCTVDAGTRACCYBDB Consensus sequence (reverse complement motif): BDBMGGTKACTDBAGGTCA Alignment: BDBMGGTKACTDBAGGTCA CTSTGTBKMCTGH------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 24 Motif name: Motif 24 Consensus sequence (original motif): HAAAAHAAARMAAA Consensus sequence (reverse complement motif): TTTRKTTTHTTTTH ************************************************************************ Best Matches for Motif ID 24 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0554.1 SOC1 Original Motif Reverse Complement Backward 8 14 0.0350822 Taxon: Plants Consensus sequence (original motif): TTTYTYTTTYTYTYTYTTTYB Consensus sequence (reverse complement motif): VMAAAMAMAMAMAAAMAMAAA Alignment: VMAAAMAMAMAMAAAMAMAAA HAAAAHAAARMAAA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0050.2 IRF1 Reverse Complement Original Motif Backward 1 14 0.0427293 Taxon: Vertebrates Consensus sequence (original motif): HBBYASTTTCACTTTCDBTTT Consensus sequence (reverse complement motif): AAABDGAAAGTGAAASTMVHH Alignment: AAABDGAAAGTGAAASTMVHH -------TTTRKTTTHTTTTH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0481.1 FOXP1 Reverse Complement Reverse Complement Forward 2 14 0.044779 Taxon: Vertebrates Consensus sequence (original motif): HHDADGTAAACAAAV Consensus sequence (reverse complement motif): VTTTGTTTACDTDHD Alignment: VTTTGTTTACDTDHD -TTTRKTTTHTTTTH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0852.1 Foxk1 Reverse Complement Reverse Complement Forward 4 14 0.0499508 Taxon: Vertebrates Consensus sequence (original motif): DDAATGTAAACAAAVVB Consensus sequence (reverse complement motif): BBVTTTGTTTACATTDD Alignment: BBVTTTGTTTACATTDD ---TTTRKTTTHTTTTH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0851.1 Foxj3 Reverse Complement Reverse Complement Forward 4 14 0.0506255 Taxon: Vertebrates Consensus sequence (original motif): HDHADGTAAACAAAVVH Consensus sequence (reverse complement motif): DBVTTTGTTTACDTHDH Alignment: DBVTTTGTTTACDTHDH ---TTTRKTTTHTTTTH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 25 Motif name: Motif 25 Consensus sequence (original motif): CWGAGCCAYCTYTC Consensus sequence (reverse complement motif): GAKAGKTGGCTCWG ************************************************************************ Best Matches for Motif ID 25 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0570.1 ABF1 Original Motif Reverse Complement Backward 2 14 0.0470515 Taxon: Plants Consensus sequence (original motif): GGMCACGTGGCVCRVVVGV Consensus sequence (reverse complement motif): VCVVBMGBGCCACGTGYCC Alignment: VCVVBMGBGCCACGTGYCC ----CWGAGCCAYCTYTC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0278.1 BAS1 Reverse Complement Reverse Complement Forward 1 14 0.0549629 Taxon: Fungi Consensus sequence (original motif): BCWBRGCCVGAGTCARDWBVV Consensus sequence (reverse complement motif): BBBWHKTGACTCBGGCKBWGB Alignment: BBBWHKTGACTCBGGCKBWGB GAKAGKTGGCTCWG------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0139.1 CTCF Reverse Complement Original Motif Backward 1 14 0.0581225 Taxon: Vertebrates Consensus sequence (original motif): YDRCCASYAGRKGGCRSYV Consensus sequence (reverse complement motif): BMSMGCCYMCTKSTGGMHM Alignment: BMSMGCCYMCTKSTGGMHM -----GAKAGKTGGCTCWG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0072.1 RORA(var.2) Reverse Complement Original Motif Backward 1 14 0.0633755 Taxon: Vertebrates Consensus sequence (original motif): DDWAWBTAGGTCAV Consensus sequence (reverse complement motif): BTGACCTABWTWDD Alignment: DDWAWBTAGGTCAV GAKAGKTGGCTCWG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0395.1 STP2 Reverse Complement Reverse Complement Backward 5 14 0.0642894 Taxon: Fungi Consensus sequence (original motif): HVVHBGGCGCCGYRYVHHBH Consensus sequence (reverse complement motif): HBDHVKKKCGGCGCCBHBVH Alignment: HBDHVKKKCGGCGCCBHBVH --GAKAGKTGGCTCWG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 26 Motif name: Motif 26 Consensus sequence (original motif): CASABACWSACACA Consensus sequence (reverse complement motif): TGTGTSWGTBTSTG ************************************************************************ Best Matches for Motif ID 26 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0543.1 eor-1 Reverse Complement Reverse Complement Backward 2 14 0.0612042 Taxon: Nematodes Consensus sequence (original motif): DRAGAGAVRSAGAGA Consensus sequence (reverse complement motif): TCTCTSMVTCTCTMD Alignment: TCTCTSMVTCTCTMD TGTGTSWGTBTSTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0554.1 SOC1 Original Motif Reverse Complement Forward 2 14 0.0662896 Taxon: Plants Consensus sequence (original motif): TTTYTYTTTYTYTYTYTTTYB Consensus sequence (reverse complement motif): VMAAAMAMAMAMAAAMAMAAA Alignment: VMAAAMAMAMAMAAAMAMAAA -CASABACWSACACA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0525.2 TP63 Reverse Complement Reverse Complement Forward 5 14 0.0687434 Taxon: Vertebrates Consensus sequence (original motif): RACATGTYGKGACATGTC Consensus sequence (reverse complement motif): GACATGTCYCMACATGTK Alignment: GACATGTCYCMACATGTK ----TGTGTSWGTBTSTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0278.1 BAS1 Reverse Complement Reverse Complement Forward 7 14 0.0720915 Taxon: Fungi Consensus sequence (original motif): BCWBRGCCVGAGTCARDWBVV Consensus sequence (reverse complement motif): BBBWHKTGACTCBGGCKBWGB Alignment: BBBWHKTGACTCBGGCKBWGB ------TGTGTSWGTBTSTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0303.1 GCN4 Reverse Complement Reverse Complement Backward 1 14 0.0726539 Taxon: Fungi Consensus sequence (original motif): BVHDDDRTGASTCAYHHHHVD Consensus sequence (reverse complement motif): DVHHDHMTGASTCAKHHHHBB Alignment: DVHHDHMTGASTCAKHHHHBB -------TGTGTSWGTBTSTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 27 Motif name: Motif 27 Consensus sequence (original motif): AAAATKCTATT Consensus sequence (reverse complement motif): AATAGYATTTT ************************************************************************ Best Matches for Motif ID 27 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0870.1 Sox1 Reverse Complement Original Motif Forward 4 11 0.0492456 Taxon: Vertebrates Consensus sequence (original motif): AACAATAVCATTGTT Consensus sequence (reverse complement motif): AACAATGBTATTGTT Alignment: AACAATAVCATTGTT ---AATAGYATTTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0866.1 SOX21 Reverse Complement Original Motif Backward 2 11 0.0541047 Taxon: Vertebrates Consensus sequence (original motif): AACAATKKYAGTGTT Consensus sequence (reverse complement motif): AACACTMYYATTGTT Alignment: AACAATKKYAGTGTT ---AATAGYATTTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0867.1 SOX4 Reverse Complement Original Motif Backward 2 11 0.0683304 Taxon: Vertebrates Consensus sequence (original motif): DAACAATTGCAGTGTT Consensus sequence (reverse complement motif): AACACTGCAATTGTTH Alignment: DAACAATTGCAGTGTT ----AATAGYATTTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0869.1 Sox11 Reverse Complement Original Motif Forward 4 11 0.068908 Taxon: Vertebrates Consensus sequence (original motif): AACAATTKCAGTGTT Consensus sequence (reverse complement motif): AACACTGRAATTGTT Alignment: AACAATTKCAGTGTT ---AATAGYATTTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0757.1 ONECUT3 Original Motif Original Motif Backward 3 11 0.077757 Taxon: Vertebrates Consensus sequence (original motif): VAAAAATCRATAAH Consensus sequence (reverse complement motif): HTTATKGATTTTTB Alignment: VAAAAATCRATAAH -AAAATKCTATT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 28 Motif name: Motif 28 Consensus sequence (original motif): TGAAAATSCTT Consensus sequence (reverse complement motif): AAGSATTTTCA ************************************************************************ Best Matches for Motif ID 28 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0868.1 SOX8 Original Motif Reverse Complement Backward 1 11 0.0571208 Taxon: Vertebrates Consensus sequence (original motif): AACAATRTGCAGTGTT Consensus sequence (reverse complement motif): AACACTGCAMATTGTT Alignment: AACACTGCAMATTGTT -----TGAAAATSCTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0435.1 YPR015C Original Motif Original Motif Backward 4 11 0.0626111 Taxon: Fungi Consensus sequence (original motif): TBDHDACGTAAATCMTDDHH Consensus sequence (reverse complement motif): HDDDARGATTTACGTHHDBA Alignment: TBDHDACGTAAATCMTDDHH ------TGAAAATSCTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0390.1 STB3 Reverse Complement Original Motif Forward 5 11 0.0637616 Taxon: Fungi Consensus sequence (original motif): GBYHAAAWTTTTTCACTBHDD Consensus sequence (reverse complement motif): HHHBAGTGAAAAAWTTTDKVC Alignment: GBYHAAAWTTTTTCACTBHDD ----AAGSATTTTCA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0867.1 SOX4 Reverse Complement Original Motif Backward 6 11 0.0656795 Taxon: Vertebrates Consensus sequence (original motif): DAACAATTGCAGTGTT Consensus sequence (reverse complement motif): AACACTGCAATTGTTH Alignment: DAACAATTGCAGTGTT AAGSATTTTCA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0627.1 Pou2f3 Reverse Complement Reverse Complement Backward 6 11 0.0735429 Taxon: Vertebrates Consensus sequence (original motif): BHDTATGCAAATBHDV Consensus sequence (reverse complement motif): BHHVATTTGCATAHHV Alignment: BHHVATTTGCATAHHV AAGSATTTTCA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 29 Motif name: Motif 29 Consensus sequence (original motif): AACATATTTTCA Consensus sequence (reverse complement motif): TGAAAATATGTT ************************************************************************ Best Matches for Motif ID 29 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0390.1 STB3 Reverse Complement Reverse Complement Backward 4 12 0.0819861 Taxon: Fungi Consensus sequence (original motif): GBYHAAAWTTTTTCACTBHDD Consensus sequence (reverse complement motif): HHHBAGTGAAAAAWTTTDKVC Alignment: HHHBAGTGAAAAAWTTTDKVC ------TGAAAATATGTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0091.1 TAL1::TCF3 Reverse Complement Original Motif Forward 1 12 0.0994318 Taxon: Vertebrates Consensus sequence (original motif): HVAMCATCTGKT Consensus sequence (reverse complement motif): ARCAGATGRTVD Alignment: HVAMCATCTGKT TGAAAATATGTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0525.2 TP63 Original Motif Original Motif Forward 1 12 0.103249 Taxon: Vertebrates Consensus sequence (original motif): RACATGTYGKGACATGTC Consensus sequence (reverse complement motif): GACATGTCYCMACATGTK Alignment: RACATGTYGKGACATGTC AACATATTTTCA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0832.1 Tcf21 Original Motif Reverse Complement Forward 3 12 0.104289 Taxon: Vertebrates Consensus sequence (original motif): VHAACAGCTGTTRB Consensus sequence (reverse complement motif): VMAACAGCTGTTDV Alignment: VMAACAGCTGTTDV --AACATATTTTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0386.1 SPT15 Original Motif Original Motif Backward 3 12 0.104645 Taxon: Fungi Consensus sequence (original motif): VHHHAGDWATATATATDSVHD Consensus sequence (reverse complement motif): DHVSDATATATATWDCTHDHV Alignment: VHHHAGDWATATATATDSVHD -------AACATATTTTCA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 30 Motif name: Motif 30 Consensus sequence (original motif): AAAMATTGTTT Consensus sequence (reverse complement motif): AAACAATYTTT ************************************************************************ Best Matches for Motif ID 30 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0296.1 FKH1 Original Motif Reverse Complement Forward 2 11 0.0851712 Taxon: Fungi Consensus sequence (original motif): BDWWWTGTAAACAAAVDDDV Consensus sequence (reverse complement motif): BHHDVTTTGTTTACAWWWHV Alignment: BHHDVTTTGTTTACAWWWHV -AAAMATTGTTT-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0378.1 SFP1 Reverse Complement Original Motif Backward 6 11 0.0888351 Taxon: Fungi Consensus sequence (original motif): DHDDDRAAAAWTTTTYYHBDD Consensus sequence (reverse complement motif): HHBHMKAAAAWTTTTKDHDHD Alignment: DHDDDRAAAAWTTTTYYHBDD -----AAACAATYTTT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0867.1 SOX4 Reverse Complement Original Motif Forward 1 11 0.0916911 Taxon: Vertebrates Consensus sequence (original motif): DAACAATTGCAGTGTT Consensus sequence (reverse complement motif): AACACTGCAATTGTTH Alignment: DAACAATTGCAGTGTT AAACAATYTTT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0390.1 STB3 Original Motif Reverse Complement Backward 3 11 0.0940113 Taxon: Fungi Consensus sequence (original motif): GBYHAAAWTTTTTCACTBHDD Consensus sequence (reverse complement motif): HHHBAGTGAAAAAWTTTDKVC Alignment: HHHBAGTGAAAAAWTTTDKVC --------AAAMATTGTTT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0110.2 ATHB-5 Original Motif Reverse Complement Backward 2 11 0.0974136 Taxon: Plants Consensus sequence (original motif): BSBBCAATTATTG Consensus sequence (reverse complement motif): CAATAATTGBVSB Alignment: CAATAATTGBVSB -AAAMATTGTTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 31 Motif name: Motif 31 Consensus sequence (original motif): AAMATGTTTMAA Consensus sequence (reverse complement motif): TTYAAACATYTT ************************************************************************ Best Matches for Motif ID 31 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0525.2 TP63 Original Motif Reverse Complement Forward 1 12 0.0683711 Taxon: Vertebrates Consensus sequence (original motif): RACATGTYGKGACATGTC Consensus sequence (reverse complement motif): GACATGTCYCMACATGTK Alignment: RACATGTYGKGACATGTC AAMATGTTTMAA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0390.1 STB3 Original Motif Original Motif Forward 5 12 0.0766443 Taxon: Fungi Consensus sequence (original motif): GBYHAAAWTTTTTCACTBHDD Consensus sequence (reverse complement motif): HHHBAGTGAAAAAWTTTDKVC Alignment: GBYHAAAWTTTTTCACTBHDD ----AAMATGTTTMAA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0452.2 Kr Original Motif Reverse Complement Backward 1 12 0.0832051 Taxon: Insects Consensus sequence (original motif): BTYAACCCTTTBHB Consensus sequence (reverse complement motif): BHVAAAGGGTTMAV Alignment: BTYAACCCTTTBHB --AAMATGTTTMAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0861.1 TP73 Original Motif Original Motif Backward 7 12 0.0855751 Taxon: Vertebrates Consensus sequence (original motif): DRCATGTCBDRACAYGYM Consensus sequence (reverse complement motif): RMCMTGTMHVGACATGKH Alignment: DRCATGTCBDRACAYGYM AAMATGTTTMAA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0378.1 SFP1 Original Motif Original Motif Forward 7 12 0.0864034 Taxon: Fungi Consensus sequence (original motif): DHDDDRAAAAWTTTTYYHBDD Consensus sequence (reverse complement motif): HHBHMKAAAAWTTTTKDHDHD Alignment: DHDDDRAAAAWTTTTYYHBDD ------AAMATGTTTMAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 32 Motif name: Motif 32 Consensus sequence (original motif): ACAACACATTT Consensus sequence (reverse complement motif): AAATGTGTTGT ************************************************************************ Best Matches for Motif ID 32 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0868.1 SOX8 Reverse Complement Original Motif Forward 3 11 0.0564374 Taxon: Vertebrates Consensus sequence (original motif): AACAATRTGCAGTGTT Consensus sequence (reverse complement motif): AACACTGCAMATTGTT Alignment: AACAATRTGCAGTGTT --AAATGTGTTGT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0866.1 SOX21 Reverse Complement Original Motif Backward 2 11 0.0695265 Taxon: Vertebrates Consensus sequence (original motif): AACAATKKYAGTGTT Consensus sequence (reverse complement motif): AACACTMYYATTGTT Alignment: AACAATKKYAGTGTT ---AAATGTGTTGT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0867.1 SOX4 Reverse Complement Original Motif Forward 5 11 0.0710951 Taxon: Vertebrates Consensus sequence (original motif): DAACAATTGCAGTGTT Consensus sequence (reverse complement motif): AACACTGCAATTGTTH Alignment: DAACAATTGCAGTGTT ----AAATGTGTTGT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0869.1 Sox11 Reverse Complement Original Motif Forward 4 11 0.0713819 Taxon: Vertebrates Consensus sequence (original motif): AACAATTKCAGTGTT Consensus sequence (reverse complement motif): AACACTGRAATTGTT Alignment: AACAATTKCAGTGTT ---AAATGTGTTGT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0870.1 Sox1 Reverse Complement Reverse Complement Backward 2 11 0.0724911 Taxon: Vertebrates Consensus sequence (original motif): AACAATAVCATTGTT Consensus sequence (reverse complement motif): AACAATGBTATTGTT Alignment: AACAATGBTATTGTT ---AAATGTGTTGT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 33 Motif name: Motif 33 Consensus sequence (original motif): AAWATRTATTT Consensus sequence (reverse complement motif): AAATAKATWTT ************************************************************************ Best Matches for Motif ID 33 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0386.1 SPT15 Reverse Complement Original Motif Backward 5 11 0.0483738 Taxon: Fungi Consensus sequence (original motif): VHHHAGDWATATATATDSVHD Consensus sequence (reverse complement motif): DHVSDATATATATWDCTHDHV Alignment: VHHHAGDWATATATATDSVHD ------AAATAKATWTT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0679.1 ONECUT1 Reverse Complement Original Motif Backward 1 11 0.0513549 Taxon: Vertebrates Consensus sequence (original motif): VAAAAATCRATAHH Consensus sequence (reverse complement motif): HHTATMGATTTTTB Alignment: VAAAAATCRATAHH ---AAATAKATWTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0756.1 ONECUT2 Reverse Complement Original Motif Backward 1 11 0.0537867 Taxon: Vertebrates Consensus sequence (original motif): VAAAAATCRATAHH Consensus sequence (reverse complement motif): HHTATMGATTTTTB Alignment: HHTATMGATTTTTB ---AAATAKATWTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0757.1 ONECUT3 Reverse Complement Original Motif Backward 1 11 0.0577659 Taxon: Vertebrates Consensus sequence (original motif): VAAAAATCRATAAH Consensus sequence (reverse complement motif): HTTATKGATTTTTB Alignment: VAAAAATCRATAAH ---AAATAKATWTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0817.1 BHLHE23 Original Motif Reverse Complement Backward 1 11 0.0739232 Taxon: Vertebrates Consensus sequence (original motif): AAACATATGKTD Consensus sequence (reverse complement motif): DARCATATGTTT Alignment: DARCATATGTTT -AAWATRTATTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 34 Motif name: Motif 34 Consensus sequence (original motif): TAATKATATAA Consensus sequence (reverse complement motif): TTATATYATTA ************************************************************************ Best Matches for Motif ID 34 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0369.1 RLM1 Original Motif Reverse Complement Backward 3 11 0.0778093 Taxon: Fungi Consensus sequence (original motif): VDTTCTAWWWATAGMYYV Consensus sequence (reverse complement motif): VKMYCTATWWWTAGAAHB Alignment: VKMYCTATWWWTAGAAHB -----TAATKATATAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0715.1 PROP1 Original Motif Reverse Complement Forward 1 11 0.0781472 Taxon: Vertebrates Consensus sequence (original motif): TAATYWAATTA Consensus sequence (reverse complement motif): TAATTWMATTA Alignment: TAATTWMATTA TAATKATATAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0683.1 POU4F2 Original Motif Reverse Complement Forward 6 11 0.0801627 Taxon: Vertebrates Consensus sequence (original motif): DTGCATAATTAATGAG Consensus sequence (reverse complement motif): CTCATTAATTATGCAD Alignment: CTCATTAATTATGCAD -----TAATKATATAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0046.2 HNF1A Original Motif Reverse Complement Backward 2 11 0.0808736 Taxon: Vertebrates Consensus sequence (original motif): DRTTAATVATTAACH Consensus sequence (reverse complement motif): HGTTAATVATTAAMD Alignment: HGTTAATVATTAAMD ---TAATKATATAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0681.1 Phox2b Original Motif Reverse Complement Forward 1 11 0.0814273 Taxon: Vertebrates Consensus sequence (original motif): TAATYYAATTA Consensus sequence (reverse complement motif): TAATTMMATTA Alignment: TAATYYAATTA TAATKATATAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 35 Motif name: Motif 35 Consensus sequence (original motif): AAAGRTMAAACTA Consensus sequence (reverse complement motif): TAGTTTYAKCTTT ************************************************************************ Best Matches for Motif ID 35 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0051.1 IRF2 Reverse Complement Reverse Complement Backward 3 13 0.0771635 Taxon: Vertebrates Consensus sequence (original motif): SGAAAGYGAAASCDWWHH Consensus sequence (reverse complement motif): DHWWBGSTTTCKCTTTCS Alignment: DHWWBGSTTTCKCTTTCS ---TAGTTTYAKCTTT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0768.1 LEF1 Original Motif Original Motif Backward 3 13 0.0805057 Taxon: Vertebrates Consensus sequence (original motif): AAAGATCAAAGGRWW Consensus sequence (reverse complement motif): WWMCCTTTGATCTTT Alignment: AAAGATCAAAGGRWW AAAGRTMAAACTA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0517.1 STAT1::STAT2 Reverse Complement Original Motif Backward 2 13 0.0836151 Taxon: Vertebrates Consensus sequence (original motif): THAGTTTCDBTTTCY Consensus sequence (reverse complement motif): KGAAAVDGAAACTDA Alignment: THAGTTTCDBTTTCY -TAGTTTYAKCTTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0115.1 NR1H2::RXRA Original Motif Original Motif Forward 1 13 0.0844712 Taxon: Vertebrates Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC AAAGRTMAAACTA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0050.2 IRF1 Reverse Complement Original Motif Forward 4 13 0.0845197 Taxon: Vertebrates Consensus sequence (original motif): HBBYASTTTCACTTTCDBTTT Consensus sequence (reverse complement motif): AAABDGAAAGTGAAASTMVHH Alignment: HBBYASTTTCACTTTCDBTTT ---TAGTTTYAKCTTT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 36 Motif name: Motif 36 Consensus sequence (original motif): TCTKTGTCAAWA Consensus sequence (reverse complement motif): TWTTGACAYAGA ************************************************************************ Best Matches for Motif ID 36 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0047.2 Foxa2 Reverse Complement Original Motif Backward 1 12 0.0652572 Taxon: Vertebrates Consensus sequence (original motif): TGTTTACWYWGB Consensus sequence (reverse complement motif): BCWMWGTAAACA Alignment: TGTTTACWYWGB TWTTGACAYAGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0343.1 NDT80 Reverse Complement Original Motif Backward 8 12 0.0846806 Taxon: Fungi Consensus sequence (original motif): HHBHHKGMCACAAAAHCSVDV Consensus sequence (reverse complement motif): BDVSGHTTTTGTGRCYDDVHH Alignment: HHBHHKGMCACAAAAHCSVDV --TWTTGACAYAGA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0150.2 Nfe2l2 Original Motif Reverse Complement Forward 2 12 0.0852282 Taxon: Vertebrates Consensus sequence (original motif): HAVVATGACTCAGCA Consensus sequence (reverse complement motif): TGCTGAGTCATVVTD Alignment: TGCTGAGTCATVVTD -TCTKTGTCAAWA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0114.3 Hnf4a Reverse Complement Reverse Complement Backward 5 12 0.085545 Taxon: Vertebrates Consensus sequence (original motif): RGGGTCAAAGTCCAVH Consensus sequence (reverse complement motif): HBTGGACTTTGACCCM Alignment: HBTGGACTTTGACCCM TWTTGACAYAGA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0278.1 BAS1 Reverse Complement Reverse Complement Backward 7 12 0.0868877 Taxon: Fungi Consensus sequence (original motif): BCWBRGCCVGAGTCARDWBVV Consensus sequence (reverse complement motif): BBBWHKTGACTCBGGCKBWGB Alignment: BBBWHKTGACTCBGGCKBWGB ---TWTTGACAYAGA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 37 Motif name: Motif 37 Consensus sequence (original motif): CTTCTGACCTC Consensus sequence (reverse complement motif): GAGGTCAGAAG ************************************************************************ Best Matches for Motif ID 37 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0729.1 RARA Reverse Complement Original Motif Forward 1 11 0.00745456 Taxon: Vertebrates Consensus sequence (original motif): GAGGTCAAAAGGTCAAKK Consensus sequence (reverse complement motif): YRTTGACCTTTTGACCTC Alignment: YRTTGACCTTTTGACCTC GAGGTCAGAAG------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0859.1 Rarg Reverse Complement Original Motif Backward 6 11 0.0220628 Taxon: Vertebrates Consensus sequence (original motif): RAGGTCAAAAGGTCAH Consensus sequence (reverse complement motif): HTGACCTTTTGACCTK Alignment: RAGGTCAAAAGGTCAH GAGGTCAGAAG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0728.1 Nr2f6(var.2) Reverse Complement Original Motif Forward 1 11 0.0222471 Taxon: Vertebrates Consensus sequence (original motif): RAGGTCAARAGGTCA Consensus sequence (reverse complement motif): TGACCTKTTGACCTM Alignment: RAGGTCAARAGGTCA GAGGTCAGAAG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0857.1 Rarb Reverse Complement Original Motif Backward 5 11 0.0229136 Taxon: Vertebrates Consensus sequence (original motif): AAAGGTCAAAAGGTCA Consensus sequence (reverse complement motif): TGACCTTTTGACCTTT Alignment: AAAGGTCAAAAGGTCA -GAGGTCAGAAG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0115.1 NR1H2::RXRA Reverse Complement Original Motif Forward 2 11 0.0417613 Taxon: Vertebrates Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC -GAGGTCAGAAG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 38 Motif name: Motif 38 Consensus sequence (original motif): CAAAGTCCAGC Consensus sequence (reverse complement motif): GCTGGACTTTG ************************************************************************ Best Matches for Motif ID 38 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0114.3 Hnf4a Original Motif Original Motif Backward 1 11 0.03409 Taxon: Vertebrates Consensus sequence (original motif): RGGGTCAAAGTCCAVH Consensus sequence (reverse complement motif): HBTGGACTTTGACCCM Alignment: RGGGTCAAAGTCCAVH -----CAAAGTCCAGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0868.1 SOX8 Reverse Complement Reverse Complement Backward 3 11 0.0638029 Taxon: Vertebrates Consensus sequence (original motif): AACAATRTGCAGTGTT Consensus sequence (reverse complement motif): AACACTGCAMATTGTT Alignment: AACACTGCAMATTGTT ---GCTGGACTTTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0115.1 NR1H2::RXRA Original Motif Original Motif Forward 7 11 0.0638121 Taxon: Vertebrates Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC ------CAAAGTCCAGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0088.2 ZNF143 Reverse Complement Reverse Complement Forward 2 11 0.0899817 Taxon: Vertebrates Consensus sequence (original motif): TWCCCAYAATGCAYYG Consensus sequence (reverse complement motif): CMMTGCATTKTGGGWA Alignment: CMMTGCATTKTGGGWA -GCTGGACTTTG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0347.1 NRG1 Original Motif Original Motif Backward 4 11 0.0975215 Taxon: Fungi Consensus sequence (original motif): HHVVDHMAGGGTCCWDBGVD Consensus sequence (reverse complement motif): DVCBDWGGACCCTRHDVBHD Alignment: HHVVDHMAGGGTCCWDBGVD ------CAAAGTCCAGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 39 Motif name: Motif 39 Consensus sequence (original motif): AGAGAAAG Consensus sequence (reverse complement motif): CTTTCTCT ************************************************************************ Best Matches for Motif ID 39 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0051.1 IRF2 Reverse Complement Reverse Complement Backward 5 8 0.0364583 Taxon: Vertebrates Consensus sequence (original motif): SGAAAGYGAAASCDWWHH Consensus sequence (reverse complement motif): DHWWBGSTTTCKCTTTCS Alignment: DHWWBGSTTTCKCTTTCS ------CTTTCTCT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0508.1 PRDM1 Original Motif Original Motif Backward 4 8 0.0410466 Taxon: Vertebrates Consensus sequence (original motif): DRAAAGTGAAAGTDD Consensus sequence (reverse complement motif): DHACTTTCACTTTMD Alignment: DRAAAGTGAAAGTDD ----AGAGAAAG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0772.1 IRF7 Reverse Complement Reverse Complement Forward 2 8 0.058837 Taxon: Vertebrates Consensus sequence (original motif): HCGAAARYGAAAVT Consensus sequence (reverse complement motif): AVTTTCKMTTTCGH Alignment: AVTTTCKMTTTCGH -CTTTCTCT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0050.2 IRF1 Original Motif Reverse Complement Backward 6 8 0.0589207 Taxon: Vertebrates Consensus sequence (original motif): HBBYASTTTCACTTTCDBTTT Consensus sequence (reverse complement motif): AAABDGAAAGTGAAASTMVHH Alignment: AAABDGAAAGTGAAASTMVHH --------AGAGAAAG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0080.4 SPI1 Original Motif Original Motif Backward 3 8 0.060117 Taxon: Vertebrates Consensus sequence (original motif): AAAAAGCGGAAGTW Consensus sequence (reverse complement motif): WACTTCCGCTTTTT Alignment: AAAAAGCGGAAGTW ----AGAGAAAG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 40 Motif name: Motif 40 Consensus sequence (original motif): TCCTCCTGGAA Consensus sequence (reverse complement motif): TTCCAGGAGGA ************************************************************************ Best Matches for Motif ID 40 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0731.1 BCL6B Original Motif Reverse Complement Backward 5 11 0.0857152 Taxon: Vertebrates Consensus sequence (original motif): TGCTTTCTAGGAATTCM Consensus sequence (reverse complement motif): YGAATTCCTAGAAAGCA Alignment: YGAATTCCTAGAAAGCA --TCCTCCTGGAA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0413.1 USV1 Original Motif Original Motif Backward 6 11 0.0862838 Taxon: Fungi Consensus sequence (original motif): DDDTTMCCCCTGAAHHDBDV Consensus sequence (reverse complement motif): VDBDHHTTCAGGGGRAADDD Alignment: DDDTTMCCCCTGAAHHDBDV ----TCCTCCTGGAA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0518.1 Stat4 Reverse Complement Original Motif Backward 3 11 0.0933536 Taxon: Vertebrates Consensus sequence (original motif): YTTCYRGGAARBVV Consensus sequence (reverse complement motif): VVVKTTCCKKGAAM Alignment: YTTCYRGGAARBVV -TTCCAGGAGGA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0532.1 Stat92E Reverse Complement Reverse Complement Forward 2 11 0.0995066 Taxon: Insects Consensus sequence (original motif): BVVAWTTCYDRGAAW Consensus sequence (reverse complement motif): WTTCMDKGAAWTVVB Alignment: WTTCMDKGAAWTVVB -TTCCAGGAGGA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0139.1 CTCF Original Motif Reverse Complement Backward 2 11 0.0996812 Taxon: Vertebrates Consensus sequence (original motif): YDRCCASYAGRKGGCRSYV Consensus sequence (reverse complement motif): BMSMGCCYMCTKSTGGMHM Alignment: BMSMGCCYMCTKSTGGMHM -------TCCTCCTGGAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 41 Motif name: Motif 41 Consensus sequence (original motif): CTGCTTTCCMAA Consensus sequence (reverse complement motif): TTYGGAAAGCAG ************************************************************************ Best Matches for Motif ID 41 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0149.1 EWSR1-FLI1 Original Motif Reverse Complement Backward 2 12 0.0853571 Taxon: Vertebrates Consensus sequence (original motif): GGAAGGAAGGAAGGAAGG Consensus sequence (reverse complement motif): CCTTCCTTCCTTCCTTCC Alignment: CCTTCCTTCCTTCCTTCC -----CTGCTTTCCMAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0138.2 REST Original Motif Reverse Complement Backward 9 12 0.0856482 Taxon: Vertebrates Consensus sequence (original motif): TTCAGCACCATGGACAGCKCC Consensus sequence (reverse complement motif): GGYGCTGTCCATGGTGCTGAA Alignment: GGYGCTGTCCATGGTGCTGAA -CTGCTTTCCMAA-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0085.1 Su(H) Original Motif Reverse Complement Forward 3 12 0.0883333 Taxon: Insects Consensus sequence (original motif): BYGTGGGAAMCBDDVD Consensus sequence (reverse complement motif): DBHBBGYTTCCCACMB Alignment: DBHBBGYTTCCCACMB --CTGCTTTCCMAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0197.2 nub Original Motif Reverse Complement Backward 1 12 0.0945833 Taxon: Insects Consensus sequence (original motif): TATGCAAATDAG Consensus sequence (reverse complement motif): CTDATTTGCATA Alignment: CTDATTTGCATA CTGCTTTCCMAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0784.1 POU1F1 Original Motif Reverse Complement Forward 1 12 0.0948228 Taxon: Vertebrates Consensus sequence (original motif): AWTATGCWAATKAG Consensus sequence (reverse complement motif): CTRATTWGCATAWT Alignment: CTRATTWGCATAWT CTGCTTTCCMAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 42 Motif name: Motif 42 Consensus sequence (original motif): TTTATGGTGAGCAT Consensus sequence (reverse complement motif): ATGCTCACCATAAA ************************************************************************ Best Matches for Motif ID 42 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0112.3 ESR1 Reverse Complement Original Motif Forward 1 14 0.0878828 Taxon: Vertebrates Consensus sequence (original motif): DRGGTCACVRTGACCTK Consensus sequence (reverse complement motif): YAGGTCAMVGTGACCKD Alignment: YAGGTCAMVGTGACCKD ATGCTCACCATAAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0860.1 Rarg(var.2) Original Motif Reverse Complement Forward 4 14 0.0949701 Taxon: Vertebrates Consensus sequence (original motif): AAGGTCAMSARAGGTCA Consensus sequence (reverse complement motif): TGACCTKTSRTGACCTT Alignment: TGACCTKTSRTGACCTT ---TTTATGGTGAGCAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0496.1 MAFK Original Motif Reverse Complement Forward 1 14 0.0960595 Taxon: Vertebrates Consensus sequence (original motif): MHDASTCAGCADWWW Consensus sequence (reverse complement motif): WWWDTGCTGASTHHR Alignment: WWWDTGCTGASTHHR TTTATGGTGAGCAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0547.1 skn-1 Reverse Complement Reverse Complement Backward 1 14 0.0962648 Taxon: Nematodes Consensus sequence (original motif): AAAATGATGACAAWD Consensus sequence (reverse complement motif): DWTTGTCATCATTTT Alignment: DWTTGTCATCATTTT -ATGCTCACCATAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0142.1 Pou5f1::Sox2 Reverse Complement Reverse Complement Forward 1 14 0.0973523 Taxon: Vertebrates Consensus sequence (original motif): CWTTGTHATGCAAAT Consensus sequence (reverse complement motif): ATTTGCATHACAAWG Alignment: ATTTGCATHACAAWG ATGCTCACCATAAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 43 Motif name: Motif 43 Consensus sequence (original motif): ATGTWTTCATTMAT Consensus sequence (reverse complement motif): ATYAATGAAWACAT ************************************************************************ Best Matches for Motif ID 43 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0573.1 ATHB-9 Reverse Complement Original Motif Forward 4 14 0.0658407 Taxon: Plants Consensus sequence (original motif): HDHHGTAATGATTRCDYBS Consensus sequence (reverse complement motif): SBKDGKAATCATTACDHBH Alignment: HDHHGTAATGATTRCDYBS ---ATYAATGAAWACAT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0390.1 STB3 Original Motif Original Motif Forward 7 14 0.0696435 Taxon: Fungi Consensus sequence (original motif): GBYHAAAWTTTTTCACTBHDD Consensus sequence (reverse complement motif): HHHBAGTGAAAAAWTTTDKVC Alignment: GBYHAAAWTTTTTCACTBHDD ------ATGTWTTCATTMAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0897.1 Hmx2 Reverse Complement Original Motif Backward 1 14 0.0705718 Taxon: Vertebrates Consensus sequence (original motif): VVAAGCAATTAAHVVDT Consensus sequence (reverse complement motif): ADBVHTTAATTGCTTVB Alignment: VVAAGCAATTAAHVVDT ---ATYAATGAAWACAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0898.1 Hmx3 Reverse Complement Original Motif Forward 4 14 0.070981 Taxon: Vertebrates Consensus sequence (original motif): VBVAGCAATTAAHDVAT Consensus sequence (reverse complement motif): ATBHHTTAATTGCTBBB Alignment: VBVAGCAATTAAHDVAT ---ATYAATGAAWACAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0492.1 JUND(var.2) Reverse Complement Original Motif Backward 2 14 0.0799956 Taxon: Vertebrates Consensus sequence (original motif): DDDRATGAYGTCATV Consensus sequence (reverse complement motif): VATGACMTCATMDDD Alignment: DDDRATGAYGTCATV ATYAATGAAWACAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 44 Motif name: Motif 44 Consensus sequence (original motif): AAAGWCATWAA Consensus sequence (reverse complement motif): TTWATGWCTTT ************************************************************************ Best Matches for Motif ID 44 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0860.1 Rarg(var.2) Reverse Complement Reverse Complement Forward 7 11 0.0698698 Taxon: Vertebrates Consensus sequence (original motif): AAGGTCAMSARAGGTCA Consensus sequence (reverse complement motif): TGACCTKTSRTGACCTT Alignment: TGACCTKTSRTGACCTT ------TTWATGWCTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0757.1 ONECUT3 Original Motif Original Motif Forward 3 11 0.0740579 Taxon: Vertebrates Consensus sequence (original motif): VAAAAATCRATAAH Consensus sequence (reverse complement motif): HTTATKGATTTTTB Alignment: VAAAAATCRATAAH --AAAGWCATWAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0857.1 Rarb Reverse Complement Reverse Complement Backward 2 11 0.0758989 Taxon: Vertebrates Consensus sequence (original motif): AAAGGTCAAAAGGTCA Consensus sequence (reverse complement motif): TGACCTTTTGACCTTT Alignment: TGACCTTTTGACCTTT ----TTWATGWCTTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0910.1 Hoxd8 Original Motif Original Motif Backward 7 11 0.0793312 Taxon: Vertebrates Consensus sequence (original motif): TAADTAATTAATRGHTH Consensus sequence (reverse complement motif): HADCMATTAATTADTTA Alignment: TAADTAATTAATRGHTH AAAGWCATWAA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0534.1 EcR::usp Reverse Complement Original Motif Backward 1 11 0.0793431 Taxon: Insects Consensus sequence (original motif): VRGKTCAWTGAMCTY Consensus sequence (reverse complement motif): MAGRTCAWTGARCKV Alignment: VRGKTCAWTGAMCTY ----TTWATGWCTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 45 Motif name: Motif 45 Consensus sequence (original motif): AATAACAGATT Consensus sequence (reverse complement motif): AATCTGTTATT ************************************************************************ Best Matches for Motif ID 45 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0867.1 SOX4 Reverse Complement Reverse Complement Forward 2 11 0.0556506 Taxon: Vertebrates Consensus sequence (original motif): DAACAATTGCAGTGTT Consensus sequence (reverse complement motif): AACACTGCAATTGTTH Alignment: AACACTGCAATTGTTH -AATCTGTTATT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0869.1 Sox11 Original Motif Original Motif Backward 2 11 0.0641523 Taxon: Vertebrates Consensus sequence (original motif): AACAATTKCAGTGTT Consensus sequence (reverse complement motif): AACACTGRAATTGTT Alignment: AACAATTKCAGTGTT ---AATAACAGATT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0870.1 Sox1 Original Motif Original Motif Forward 4 11 0.065552 Taxon: Vertebrates Consensus sequence (original motif): AACAATAVCATTGTT Consensus sequence (reverse complement motif): AACAATGBTATTGTT Alignment: AACAATAVCATTGTT ---AATAACAGATT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0369.1 RLM1 Original Motif Original Motif Forward 7 11 0.0669709 Taxon: Fungi Consensus sequence (original motif): VDTTCTAWWWATAGMYYV Consensus sequence (reverse complement motif): VKMYCTATWWWTAGAAHB Alignment: VDTTCTAWWWATAGMYYV ------AATAACAGATT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0743.1 SCRT1 Reverse Complement Reverse Complement Forward 4 11 0.0694627 Taxon: Vertebrates Consensus sequence (original motif): RHGCAACAGGTGGBH Consensus sequence (reverse complement motif): HVCCACCTGTTGCHM Alignment: HVCCACCTGTTGCHM ---AATCTGTTATT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 46 Motif name: Motif 46 Consensus sequence (original motif): CTGTTTTWAT Consensus sequence (reverse complement motif): ATWAAAACAG ************************************************************************ Best Matches for Motif ID 46 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0497.1 MEF2C Reverse Complement Original Motif Forward 4 10 0.0725418 Taxon: Vertebrates Consensus sequence (original motif): DDDCYAAAAATAGMH Consensus sequence (reverse complement motif): HYCTATTTTTMGHDD Alignment: DDDCYAAAAATAGMH ---ATWAAAACAG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0773.1 MEF2D Original Motif Reverse Complement Backward 2 10 0.0729184 Taxon: Vertebrates Consensus sequence (original motif): DCTAWAAATAGM Consensus sequence (reverse complement motif): YCTATTTWTAGD Alignment: YCTATTTWTAGD -CTGTTTTWAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0660.1 MEF2B Reverse Complement Original Motif Backward 2 10 0.0745732 Taxon: Vertebrates Consensus sequence (original motif): RCTAWAAATAGC Consensus sequence (reverse complement motif): GCTATTTWTAGM Alignment: RCTAWAAATAGC -ATWAAAACAG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0052.3 MEF2A Reverse Complement Original Motif Forward 2 10 0.0747953 Taxon: Vertebrates Consensus sequence (original motif): KCTAWAAATAGM Consensus sequence (reverse complement motif): YCTATTTWTAGR Alignment: KCTAWAAATAGM -ATWAAAACAG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0458.1 slp1 Reverse Complement Reverse Complement Forward 2 10 0.075414 Taxon: Insects Consensus sequence (original motif): DTGTTTACRYW Consensus sequence (reverse complement motif): WMKGTAAACAD Alignment: WMKGTAAACAD -ATWAAAACAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 47 Motif name: Motif 47 Consensus sequence (original motif): ATTCTGTRAAG Consensus sequence (reverse complement motif): CTTKACAGAAT ************************************************************************ Best Matches for Motif ID 47 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0752.1 ZNF410 Original Motif Reverse Complement Backward 3 11 0.0639809 Taxon: Vertebrates Consensus sequence (original motif): BMCATCCCATAATAHTC Consensus sequence (reverse complement motif): GADTATTATGGGATGRV Alignment: GADTATTATGGGATGRV ----ATTCTGTRAAG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0137.3 STAT1 Original Motif Reverse Complement Backward 1 11 0.0774911 Taxon: Vertebrates Consensus sequence (original motif): BTTCYRGGAAA Consensus sequence (reverse complement motif): TTTCCKKGAAV Alignment: BTTCYRGGAAA ATTCTGTRAAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0144.2 STAT3 Original Motif Original Motif Backward 1 11 0.0787818 Taxon: Vertebrates Consensus sequence (original motif): BTTCYKGGAAD Consensus sequence (reverse complement motif): DTTCCYMGAAB Alignment: BTTCYKGGAAD ATTCTGTRAAG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0731.1 BCL6B Original Motif Reverse Complement Backward 3 11 0.0808112 Taxon: Vertebrates Consensus sequence (original motif): TGCTTTCTAGGAATTCM Consensus sequence (reverse complement motif): YGAATTCCTAGAAAGCA Alignment: YGAATTCCTAGAAAGCA ----ATTCTGTRAAG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0532.1 Stat92E Original Motif Reverse Complement Forward 1 11 0.0831384 Taxon: Insects Consensus sequence (original motif): BVVAWTTCYDRGAAW Consensus sequence (reverse complement motif): WTTCMDKGAAWTVVB Alignment: WTTCMDKGAAWTVVB ATTCTGTRAAG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 48 Motif name: Motif 48 Consensus sequence (original motif): ATTTAGTAAA Consensus sequence (reverse complement motif): TTTACTAAAT ************************************************************************ Best Matches for Motif ID 48 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0639.1 DBP Reverse Complement Reverse Complement Backward 2 10 0.0789384 Taxon: Vertebrates Consensus sequence (original motif): BRTTACGTAAYV Consensus sequence (reverse complement motif): BKTTACGTAAKV Alignment: BKTTACGTAAKV -TTTACTAAAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0843.1 TEF Reverse Complement Reverse Complement Backward 2 10 0.0830691 Taxon: Vertebrates Consensus sequence (original motif): BRTTACRTAAYV Consensus sequence (reverse complement motif): BKTTAMGTAAKV Alignment: BKTTAMGTAAKV -TTTACTAAAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0135.1 Lhx3 Reverse Complement Reverse Complement Backward 3 10 0.0839067 Taxon: Vertebrates Consensus sequence (original motif): WAATTAATTAWYB Consensus sequence (reverse complement motif): BMWTAATTAATTW Alignment: BMWTAATTAATTW -TTTACTAAAT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0415.1 YAP1 Reverse Complement Reverse Complement Forward 6 10 0.0862326 Taxon: Fungi Consensus sequence (original motif): HBDDDMTTACGTAAKVHHVH Consensus sequence (reverse complement motif): HVDHVYTTACGTAARHDDVH Alignment: HVDHVYTTACGTAARHDDVH -----TTTACTAAAT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0419.1 YAP7 Original Motif Reverse Complement Backward 1 10 0.0870872 Taxon: Fungi Consensus sequence (original motif): ATTAGTAAKCA Consensus sequence (reverse complement motif): TGYTTACTAAT Alignment: ATTAGTAAKCA -ATTTAGTAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 49 Motif name: Motif 49 Consensus sequence (original motif): ATTTATTGCTA Consensus sequence (reverse complement motif): TAGCAATAAAT ************************************************************************ Best Matches for Motif ID 49 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0896.1 Hmx1 Original Motif Reverse Complement Forward 5 11 0.0695803 Taxon: Vertebrates Consensus sequence (original motif): VVVAGCAATTAADGVDB Consensus sequence (reverse complement motif): VDBCDTTAATTGCTBVB Alignment: VDBCDTTAATTGCTBVB ----ATTTATTGCTA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0465.1 CDX2 Reverse Complement Original Motif Backward 1 11 0.0712989 Taxon: Vertebrates Consensus sequence (original motif): VDGYMATAAAA Consensus sequence (reverse complement motif): TTTTATRKCDB Alignment: VDGYMATAAAA TAGCAATAAAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0897.1 Hmx2 Reverse Complement Original Motif Backward 5 11 0.0745102 Taxon: Vertebrates Consensus sequence (original motif): VVAAGCAATTAAHVVDT Consensus sequence (reverse complement motif): ADBVHTTAATTGCTTVB Alignment: VVAAGCAATTAAHVVDT --TAGCAATAAAT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0898.1 Hmx3 Reverse Complement Original Motif Backward 5 11 0.0751696 Taxon: Vertebrates Consensus sequence (original motif): VBVAGCAATTAAHDVAT Consensus sequence (reverse complement motif): ATBHHTTAATTGCTBBB Alignment: VBVAGCAATTAAHDVAT --TAGCAATAAAT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0386.1 SPT15 Original Motif Reverse Complement Backward 4 11 0.0777174 Taxon: Fungi Consensus sequence (original motif): VHHHAGDWATATATATDSVHD Consensus sequence (reverse complement motif): DHVSDATATATATWDCTHDHV Alignment: DHVSDATATATATWDCTHDHV -------ATTTATTGCTA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 50 Motif name: Motif 50 Consensus sequence (original motif): TTGCTGCTTTT Consensus sequence (reverse complement motif): AAAAGCAGCAA ************************************************************************ Best Matches for Motif ID 50 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0290.1 DAL81 Original Motif Reverse Complement Backward 1 11 0.0481818 Taxon: Fungi Consensus sequence (original motif): AAAAGCCGCGGGCGGGATT Consensus sequence (reverse complement motif): AATCCCGCCCGCGGCTTTT Alignment: AATCCCGCCCGCGGCTTTT --------TTGCTGCTTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0080.4 SPI1 Reverse Complement Original Motif Backward 3 11 0.0629111 Taxon: Vertebrates Consensus sequence (original motif): AAAAAGCGGAAGTW Consensus sequence (reverse complement motif): WACTTCCGCTTTTT Alignment: AAAAAGCGGAAGTW -AAAAGCAGCAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0454.1 odd Reverse Complement Original Motif Forward 1 11 0.0709091 Taxon: Insects Consensus sequence (original motif): MACAGTAGCAV Consensus sequence (reverse complement motif): VTGCTACTGTY Alignment: VTGCTACTGTY AAAAGCAGCAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0559.1 PI Reverse Complement Original Motif Backward 2 11 0.0714386 Taxon: Plants Consensus sequence (original motif): CCAAAARWRGAAAR Consensus sequence (reverse complement motif): KTTTCMWKTTTTGG Alignment: CCAAAARWRGAAAR --AAAAGCAGCAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0149.1 EWSR1-FLI1 Reverse Complement Original Motif Backward 3 11 0.0724242 Taxon: Vertebrates Consensus sequence (original motif): GGAAGGAAGGAAGGAAGG Consensus sequence (reverse complement motif): CCTTCCTTCCTTCCTTCC Alignment: GGAAGGAAGGAAGGAAGG -----AAAAGCAGCAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 51 Motif name: Motif 51 Consensus sequence (original motif): TTGTTGATTTT Consensus sequence (reverse complement motif): AAAATCAACAA ************************************************************************ Best Matches for Motif ID 51 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0757.1 ONECUT3 Original Motif Reverse Complement Backward 3 11 0.0531274 Taxon: Vertebrates Consensus sequence (original motif): VAAAAATCRATAAH Consensus sequence (reverse complement motif): HTTATKGATTTTTB Alignment: HTTATKGATTTTTB -TTGTTGATTTT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0756.1 ONECUT2 Reverse Complement Original Motif Backward 2 11 0.0671736 Taxon: Vertebrates Consensus sequence (original motif): VAAAAATCRATAHH Consensus sequence (reverse complement motif): HHTATMGATTTTTB Alignment: VAAAAATCRATAHH --AAAATCAACAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0679.1 ONECUT1 Reverse Complement Original Motif Backward 2 11 0.0679532 Taxon: Vertebrates Consensus sequence (original motif): VAAAAATCRATAHH Consensus sequence (reverse complement motif): HHTATMGATTTTTB Alignment: VAAAAATCRATAHH --AAAATCAACAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0852.1 Foxk1 Reverse Complement Original Motif Backward 5 11 0.0827755 Taxon: Vertebrates Consensus sequence (original motif): DDAATGTAAACAAAVVB Consensus sequence (reverse complement motif): BBVTTTGTTTACATTDD Alignment: DDAATGTAAACAAAVVB --AAAATCAACAA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0851.1 Foxj3 Reverse Complement Original Motif Backward 5 11 0.0858812 Taxon: Vertebrates Consensus sequence (original motif): HDHADGTAAACAAAVVH Consensus sequence (reverse complement motif): DBVTTTGTTTACDTHDH Alignment: HDHADGTAAACAAAVVH --AAAATCAACAA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 52 Motif name: Motif 52 Consensus sequence (original motif): TTACWGTTT Consensus sequence (reverse complement motif): AAACWGTAA ************************************************************************ Best Matches for Motif ID 52 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0653.1 IRF9 Original Motif Reverse Complement Forward 3 9 0.0458188 Taxon: Vertebrates Consensus sequence (original motif): AACGAAACCGAAACT Consensus sequence (reverse complement motif): AGTTTCGGTTTCGTT Alignment: AGTTTCGGTTTCGTT --TTACWGTTT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0652.1 IRF8 Original Motif Reverse Complement Forward 3 9 0.0475291 Taxon: Vertebrates Consensus sequence (original motif): HCGAAACCGAAACT Consensus sequence (reverse complement motif): AGTTTCGGTTTCGH Alignment: AGTTTCGGTTTCGH --TTACWGTTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0050.2 IRF1 Reverse Complement Reverse Complement Backward 7 9 0.0579027 Taxon: Vertebrates Consensus sequence (original motif): HBBYASTTTCACTTTCDBTTT Consensus sequence (reverse complement motif): AAABDGAAAGTGAAASTMVHH Alignment: AAABDGAAAGTGAAASTMVHH ------AAACWGTAA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0867.1 SOX4 Reverse Complement Reverse Complement Forward 2 9 0.058528 Taxon: Vertebrates Consensus sequence (original motif): DAACAATTGCAGTGTT Consensus sequence (reverse complement motif): AACACTGCAATTGTTH Alignment: AACACTGCAATTGTTH -AAACWGTAA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0407.1 THI2 Reverse Complement Original Motif Forward 3 9 0.0591606 Taxon: Fungi Consensus sequence (original motif): GGMAACYSWAAGARC Consensus sequence (reverse complement motif): GKTCTTWSMGTTYCC Alignment: GGMAACYSWAAGARC --AAACWGTAA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 53 Motif name: Motif 53 Consensus sequence (original motif): TTTAATGTYTTTWA Consensus sequence (reverse complement motif): TWAAAKACATTAAA ************************************************************************ Best Matches for Motif ID 53 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0757.1 ONECUT3 Original Motif Reverse Complement Backward 1 14 0.0925265 Taxon: Vertebrates Consensus sequence (original motif): VAAAAATCRATAAH Consensus sequence (reverse complement motif): HTTATKGATTTTTB Alignment: HTTATKGATTTTTB TTTAATGTYTTTWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0554.1 SOC1 Original Motif Original Motif Forward 8 14 0.104931 Taxon: Plants Consensus sequence (original motif): TTTYTYTTTYTYTYTYTTTYB Consensus sequence (reverse complement motif): VMAAAMAMAMAMAAAMAMAAA Alignment: TTTYTYTTTYTYTYTYTTTYB -------TTTAATGTYTTTWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0390.1 STB3 Original Motif Original Motif Forward 2 14 0.104981 Taxon: Fungi Consensus sequence (original motif): GBYHAAAWTTTTTCACTBHDD Consensus sequence (reverse complement motif): HHHBAGTGAAAAAWTTTDKVC Alignment: GBYHAAAWTTTTTCACTBHDD -TTTAATGTYTTTWA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0693.1 Vdr Reverse Complement Reverse Complement Forward 1 14 0.1052 Taxon: Vertebrates Consensus sequence (original motif): GRGTTCATYGRGTTCA Consensus sequence (reverse complement motif): TGAACKCMATGAACKC Alignment: TGAACKCMATGAACKC TWAAAKACATTAAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0050.2 IRF1 Original Motif Original Motif Forward 8 14 0.109069 Taxon: Vertebrates Consensus sequence (original motif): HBBYASTTTCACTTTCDBTTT Consensus sequence (reverse complement motif): AAABDGAAAGTGAAASTMVHH Alignment: HBBYASTTTCACTTTCDBTTT -------TTTAATGTYTTTWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 54 Motif name: Motif 54 Consensus sequence (original motif): AAAGATGA Consensus sequence (reverse complement motif): TCATCTTT ************************************************************************ Best Matches for Motif ID 54 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0547.1 skn-1 Original Motif Original Motif Forward 3 8 0.0443289 Taxon: Nematodes Consensus sequence (original motif): AAAATGATGACAAWD Consensus sequence (reverse complement motif): DWTTGTCATCATTTT Alignment: AAAATGATGACAAWD --AAAGATGA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0080.4 SPI1 Original Motif Original Motif Forward 3 8 0.0514176 Taxon: Vertebrates Consensus sequence (original motif): AAAAAGCGGAAGTW Consensus sequence (reverse complement motif): WACTTCCGCTTTTT Alignment: AAAAAGCGGAAGTW --AAAGATGA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0859.1 Rarg Reverse Complement Reverse Complement Backward 8 8 0.0535921 Taxon: Vertebrates Consensus sequence (original motif): RAGGTCAAAAGGTCAH Consensus sequence (reverse complement motif): HTGACCTTTTGACCTK Alignment: HTGACCTTTTGACCTK -TCATCTTT------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0769.1 Tcf7 Original Motif Original Motif Forward 1 8 0.0545209 Taxon: Vertebrates Consensus sequence (original motif): AAAGATCAAAGG Consensus sequence (reverse complement motif): CCTTTGATCTTT Alignment: AAAGATCAAAGG AAAGATGA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0856.1 RXRG Reverse Complement Reverse Complement Backward 7 8 0.0548393 Taxon: Vertebrates Consensus sequence (original motif): GRGGTCAAAGGTCA Consensus sequence (reverse complement motif): TGACCTTTGACCMC Alignment: TGACCTTTGACCMC TCATCTTT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 55 Motif name: Motif 55 Consensus sequence (original motif): AGATGYTCTTG Consensus sequence (reverse complement motif): CAAGAKCATCT ************************************************************************ Best Matches for Motif ID 55 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0870.1 Sox1 Original Motif Reverse Complement Backward 3 11 0.0926988 Taxon: Vertebrates Consensus sequence (original motif): AACAATAVCATTGTT Consensus sequence (reverse complement motif): AACAATGBTATTGTT Alignment: AACAATGBTATTGTT --AGATGYTCTTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0112.3 ESR1 Reverse Complement Original Motif Backward 2 11 0.108963 Taxon: Vertebrates Consensus sequence (original motif): DRGGTCACVRTGACCTK Consensus sequence (reverse complement motif): YAGGTCAMVGTGACCKD Alignment: DRGGTCACVRTGACCTK -----CAAGAKCATCT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0869.1 Sox11 Reverse Complement Original Motif Backward 3 11 0.110947 Taxon: Vertebrates Consensus sequence (original motif): AACAATTKCAGTGTT Consensus sequence (reverse complement motif): AACACTGRAATTGTT Alignment: AACAATTKCAGTGTT --CAAGAKCATCT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0729.1 RARA Reverse Complement Original Motif Backward 1 11 0.113181 Taxon: Vertebrates Consensus sequence (original motif): GAGGTCAAAAGGTCAAKK Consensus sequence (reverse complement motif): YRTTGACCTTTTGACCTC Alignment: YRTTGACCTTTTGACCTC -------CAAGAKCATCT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0106.3 TP53 Reverse Complement Reverse Complement Backward 2 11 0.113489 Taxon: Vertebrates Consensus sequence (original motif): RACATGYCCGGRCATGTY Consensus sequence (reverse complement motif): KACATGMCCGGKCATGTK Alignment: KACATGMCCGGKCATGTK ------CAAGAKCATCT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 56 Motif name: Motif 56 Consensus sequence (original motif): TGGTGTCA Consensus sequence (reverse complement motif): TGACACCA ************************************************************************ Best Matches for Motif ID 56 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0783.1 PKNOX2 Reverse Complement Reverse Complement Forward 1 8 0.0283731 Taxon: Vertebrates Consensus sequence (original motif): TGACAGGTGTCA Consensus sequence (reverse complement motif): TGACACCTGTCA Alignment: TGACACCTGTCA TGACACCA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0782.1 PKNOX1 Original Motif Original Motif Backward 1 8 0.0329749 Taxon: Vertebrates Consensus sequence (original motif): TGACAGSTGTCA Consensus sequence (reverse complement motif): TGACASCTGTCA Alignment: TGACAGSTGTCA ----TGGTGTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0796.1 TGIF1 Original Motif Original Motif Backward 1 8 0.0414296 Taxon: Vertebrates Consensus sequence (original motif): TGACAGCTGTCA Consensus sequence (reverse complement motif): TGACAGCTGTCA Alignment: TGACAGCTGTCA ----TGGTGTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0488.1 JUN Original Motif Original Motif Backward 2 8 0.0427495 Taxon: Vertebrates Consensus sequence (original motif): DDRATGATGTCAT Consensus sequence (reverse complement motif): ATGACATCATMDD Alignment: DDRATGATGTCAT ----TGGTGTCA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0835.1 BATF3 Reverse Complement Original Motif Forward 4 8 0.0446956 Taxon: Vertebrates Consensus sequence (original motif): TGATGACGTCATCA Consensus sequence (reverse complement motif): TGATGACGTCATCA Alignment: TGATGACGTCATCA ---TGACACCA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 57 Motif name: Motif 57 Consensus sequence (original motif): ACTTTGG Consensus sequence (reverse complement motif): CCAAAGT ************************************************************************ Best Matches for Motif ID 57 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0114.3 Hnf4a Original Motif Reverse Complement Backward 5 7 0.0341846 Taxon: Vertebrates Consensus sequence (original motif): RGGGTCAAAGTCCAVH Consensus sequence (reverse complement motif): HBTGGACTTTGACCCM Alignment: HBTGGACTTTGACCCM -----ACTTTGG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0484.1 HNF4G Reverse Complement Original Motif Forward 6 7 0.052983 Taxon: Vertebrates Consensus sequence (original motif): DVRGDBCAAAGKYCA Consensus sequence (reverse complement motif): TGKRCTTTGBDCKVD Alignment: DVRGDBCAAAGKYCA -----CCAAAGT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0335.1 MET4 Reverse Complement Reverse Complement Backward 2 7 0.0587852 Taxon: Fungi Consensus sequence (original motif): AACTGTGG Consensus sequence (reverse complement motif): CCACAGTT Alignment: CCACAGTT CCAAAGT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0088.2 ZNF143 Original Motif Reverse Complement Forward 7 7 0.0652195 Taxon: Vertebrates Consensus sequence (original motif): TWCCCAYAATGCAYYG Consensus sequence (reverse complement motif): CMMTGCATTKTGGGWA Alignment: CMMTGCATTKTGGGWA ------ACTTTGG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0769.1 Tcf7 Original Motif Reverse Complement Forward 1 7 0.0688036 Taxon: Vertebrates Consensus sequence (original motif): AAAGATCAAAGG Consensus sequence (reverse complement motif): CCTTTGATCTTT Alignment: CCTTTGATCTTT ACTTTGG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 58 Motif name: Motif 58 Consensus sequence (original motif): ATKAYTTTG Consensus sequence (reverse complement motif): CAAAKTYAT ************************************************************************ Best Matches for Motif ID 58 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0592.2 Esrra Original Motif Reverse Complement Forward 1 9 0.063744 Taxon: Vertebrates Consensus sequence (original motif): TTCAAGGTCAT Consensus sequence (reverse complement motif): ATGACCTTGAA Alignment: ATGACCTTGAA ATKAYTTTG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0866.1 SOX21 Reverse Complement Original Motif Forward 3 9 0.0687989 Taxon: Vertebrates Consensus sequence (original motif): AACAATKKYAGTGTT Consensus sequence (reverse complement motif): AACACTMYYATTGTT Alignment: AACAATKKYAGTGTT --CAAAKTYAT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0141.3 ESRRB Reverse Complement Original Motif Forward 2 9 0.0713784 Taxon: Vertebrates Consensus sequence (original motif): TCAAGGTCAWH Consensus sequence (reverse complement motif): HWTGACCTTGA Alignment: TCAAGGTCAWH -CAAAKTYAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0114.3 Hnf4a Original Motif Reverse Complement Backward 6 9 0.0771111 Taxon: Vertebrates Consensus sequence (original motif): RGGGTCAAAGTCCAVH Consensus sequence (reverse complement motif): HBTGGACTTTGACCCM Alignment: HBTGGACTTTGACCCM --ATKAYTTTG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0870.1 Sox1 Reverse Complement Reverse Complement Forward 3 9 0.0773087 Taxon: Vertebrates Consensus sequence (original motif): AACAATAVCATTGTT Consensus sequence (reverse complement motif): AACAATGBTATTGTT Alignment: AACAATGBTATTGTT --CAAAKTYAT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 59 Motif name: Motif 59 Consensus sequence (original motif): GCTGTGAC Consensus sequence (reverse complement motif): GTCACAGC ************************************************************************ Best Matches for Motif ID 59 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0115.1 NR1H2::RXRA Reverse Complement Original Motif Backward 6 8 0.06375 Taxon: Vertebrates Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC ----GTCACAGC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0855.1 RXRB Original Motif Reverse Complement Backward 4 8 0.0690586 Taxon: Vertebrates Consensus sequence (original motif): GGGGTCAAAGGTCA Consensus sequence (reverse complement motif): TGACCTTTGACCCC Alignment: TGACCTTTGACCCC ---GCTGTGAC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0512.2 Rxra Original Motif Reverse Complement Backward 4 8 0.0692026 Taxon: Vertebrates Consensus sequence (original motif): GRGGTCAAAGGTCA Consensus sequence (reverse complement motif): TGACCTTTGACCMC Alignment: TGACCTTTGACCMC ---GCTGTGAC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0856.1 RXRG Original Motif Reverse Complement Backward 4 8 0.0705567 Taxon: Vertebrates Consensus sequence (original motif): GRGGTCAAAGGTCA Consensus sequence (reverse complement motif): TGACCTTTGACCMC Alignment: TGACCTTTGACCMC ---GCTGTGAC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0114.3 Hnf4a Original Motif Reverse Complement Forward 6 8 0.0729732 Taxon: Vertebrates Consensus sequence (original motif): RGGGTCAAAGTCCAVH Consensus sequence (reverse complement motif): HBTGGACTTTGACCCM Alignment: HBTGGACTTTGACCCM -----GCTGTGAC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 60 Motif name: Motif 60 Consensus sequence (original motif): AAGTTCA Consensus sequence (reverse complement motif): TGAACTT ************************************************************************ Best Matches for Motif ID 60 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0859.1 Rarg Original Motif Original Motif Forward 9 7 0.00755312 Taxon: Vertebrates Consensus sequence (original motif): RAGGTCAAAAGGTCAH Consensus sequence (reverse complement motif): HTGACCTTTTGACCTK Alignment: RAGGTCAAAAGGTCAH --------AAGTTCA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0729.1 RARA Original Motif Original Motif Backward 4 7 0.00847657 Taxon: Vertebrates Consensus sequence (original motif): GAGGTCAAAAGGTCAAKK Consensus sequence (reverse complement motif): YRTTGACCTTTTGACCTC Alignment: GAGGTCAAAAGGTCAAKK --------AAGTTCA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0857.1 Rarb Original Motif Original Motif Backward 1 7 0.0101369 Taxon: Vertebrates Consensus sequence (original motif): AAAGGTCAAAAGGTCA Consensus sequence (reverse complement motif): TGACCTTTTGACCTTT Alignment: AAAGGTCAAAAGGTCA ---------AAGTTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0115.1 NR1H2::RXRA Original Motif Original Motif Forward 9 7 0.0105855 Taxon: Vertebrates Consensus sequence (original motif): AAAGGTCAAAGGTCAAC Consensus sequence (reverse complement motif): GTTGACCTTTGACCTTT Alignment: AAAGGTCAAAGGTCAAC --------AAGTTCA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0141.3 ESRRB Original Motif Original Motif Backward 3 7 0.0114378 Taxon: Vertebrates Consensus sequence (original motif): TCAAGGTCAWH Consensus sequence (reverse complement motif): HWTGACCTTGA Alignment: TCAAGGTCAWH --AAGTTCA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 61 Motif name: Motif 61 Consensus sequence (original motif): TGGAGGAAA Consensus sequence (reverse complement motif): TTTCCTCCA ************************************************************************ Best Matches for Motif ID 61 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0758.1 E2F7 Original Motif Reverse Complement Backward 3 9 0.0454441 Taxon: Vertebrates Consensus sequence (original motif): TTTTCCCGCCAAAA Consensus sequence (reverse complement motif): TTTTGGCGGGAAAA Alignment: TTTTGGCGGGAAAA ---TGGAGGAAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0865.1 E2F8 Original Motif Reverse Complement Backward 2 9 0.0495135 Taxon: Vertebrates Consensus sequence (original motif): TTTCCCGCCAAA Consensus sequence (reverse complement motif): TTTGGCGGGAAA Alignment: TTTGGCGGGAAA --TGGAGGAAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0463.1 Bcl6 Original Motif Reverse Complement Backward 1 9 0.0628952 Taxon: Vertebrates Consensus sequence (original motif): DTTCCTRGAAAGCH Consensus sequence (reverse complement motif): HGCTTTCKAGGAAD Alignment: HGCTTTCKAGGAAD -----TGGAGGAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0731.1 BCL6B Original Motif Original Motif Backward 4 9 0.0690403 Taxon: Vertebrates Consensus sequence (original motif): TGCTTTCTAGGAATTCM Consensus sequence (reverse complement motif): YGAATTCCTAGAAAGCA Alignment: TGCTTTCTAGGAATTCM -----TGGAGGAAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0149.1 EWSR1-FLI1 Original Motif Original Motif Forward 9 9 0.0732804 Taxon: Vertebrates Consensus sequence (original motif): GGAAGGAAGGAAGGAAGG Consensus sequence (reverse complement motif): CCTTCCTTCCTTCCTTCC Alignment: GGAAGGAAGGAAGGAAGG --------TGGAGGAAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 62 Motif name: Motif 62 Consensus sequence (original motif): TGAATGAA Consensus sequence (reverse complement motif): TTCATTCA ************************************************************************ Best Matches for Motif ID 62 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0149.1 EWSR1-FLI1 Reverse Complement Reverse Complement Backward 1 8 0.0482362 Taxon: Vertebrates Consensus sequence (original motif): GGAAGGAAGGAAGGAAGG Consensus sequence (reverse complement motif): CCTTCCTTCCTTCCTTCC Alignment: CCTTCCTTCCTTCCTTCC ----------TTCATTCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0070.1 PBX1 Original Motif Reverse Complement Backward 3 8 0.0536429 Taxon: Vertebrates Consensus sequence (original motif): HBATCAATCAAW Consensus sequence (reverse complement motif): WTTGATTGATBD Alignment: WTTGATTGATBD --TGAATGAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0683.1 POU4F2 Original Motif Original Motif Forward 9 8 0.0638736 Taxon: Vertebrates Consensus sequence (original motif): DTGCATAATTAATGAG Consensus sequence (reverse complement motif): CTCATTAATTATGCAD Alignment: DTGCATAATTAATGAG --------TGAATGAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0693.1 Vdr Reverse Complement Original Motif Backward 6 8 0.0644108 Taxon: Vertebrates Consensus sequence (original motif): GRGTTCATYGRGTTCA Consensus sequence (reverse complement motif): TGAACKCMATGAACKC Alignment: GRGTTCATYGRGTTCA ---TTCATTCA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0433.1 YOX1 Original Motif Reverse Complement Backward 1 8 0.0649425 Taxon: Fungi Consensus sequence (original motif): TTAATTAA Consensus sequence (reverse complement motif): TTAATTAA Alignment: TTAATTAA TGAATGAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 63 Motif name: Motif 63 Consensus sequence (original motif): AAKGAAAGGCA Consensus sequence (reverse complement motif): TGCCTTTCYTT ************************************************************************ Best Matches for Motif ID 63 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0149.1 EWSR1-FLI1 Reverse Complement Reverse Complement Backward 2 11 0.0609356 Taxon: Vertebrates Consensus sequence (original motif): GGAAGGAAGGAAGGAAGG Consensus sequence (reverse complement motif): CCTTCCTTCCTTCCTTCC Alignment: CCTTCCTTCCTTCCTTCC ------TGCCTTTCYTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0517.1 STAT1::STAT2 Original Motif Reverse Complement Forward 5 11 0.0653589 Taxon: Vertebrates Consensus sequence (original motif): THAGTTTCDBTTTCY Consensus sequence (reverse complement motif): KGAAAVDGAAACTDA Alignment: KGAAAVDGAAACTDA ----AAKGAAAGGCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0050.2 IRF1 Original Motif Reverse Complement Backward 3 11 0.0671464 Taxon: Vertebrates Consensus sequence (original motif): HBBYASTTTCACTTTCDBTTT Consensus sequence (reverse complement motif): AAABDGAAAGTGAAASTMVHH Alignment: AAABDGAAAGTGAAASTMVHH --------AAKGAAAGGCA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0508.1 PRDM1 Original Motif Original Motif Forward 5 11 0.0682931 Taxon: Vertebrates Consensus sequence (original motif): DRAAAGTGAAAGTDD Consensus sequence (reverse complement motif): DHACTTTCACTTTMD Alignment: DRAAAGTGAAAGTDD ----AAKGAAAGGCA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0051.1 IRF2 Original Motif Original Motif Forward 5 11 0.0707841 Taxon: Vertebrates Consensus sequence (original motif): SGAAAGYGAAASCDWWHH Consensus sequence (reverse complement motif): DHWWBGSTTTCKCTTTCS Alignment: SGAAAGYGAAASCDWWHH ----AAKGAAAGGCA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 64 Motif name: Motif 64 Consensus sequence (original motif): AATGKAAGAA Consensus sequence (reverse complement motif): TTCTTYCATT ************************************************************************ Best Matches for Motif ID 64 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0149.1 EWSR1-FLI1 Reverse Complement Reverse Complement Forward 3 10 0.0525952 Taxon: Vertebrates Consensus sequence (original motif): GGAAGGAAGGAAGGAAGG Consensus sequence (reverse complement motif): CCTTCCTTCCTTCCTTCC Alignment: CCTTCCTTCCTTCCTTCC --TTCTTYCATT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0407.1 THI2 Reverse Complement Reverse Complement Backward 5 10 0.0636381 Taxon: Fungi Consensus sequence (original motif): GGMAACYSWAAGARC Consensus sequence (reverse complement motif): GKTCTTWSMGTTYCC Alignment: GKTCTTWSMGTTYCC -TTCTTYCATT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0390.1 STB3 Reverse Complement Original Motif Forward 8 10 0.0719718 Taxon: Fungi Consensus sequence (original motif): GBYHAAAWTTTTTCACTBHDD Consensus sequence (reverse complement motif): HHHBAGTGAAAAAWTTTDKVC Alignment: GBYHAAAWTTTTTCACTBHDD -------TTCTTYCATT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0050.2 IRF1 Reverse Complement Original Motif Forward 4 10 0.0766109 Taxon: Vertebrates Consensus sequence (original motif): HBBYASTTTCACTTTCDBTTT Consensus sequence (reverse complement motif): AAABDGAAAGTGAAASTMVHH Alignment: HBBYASTTTCACTTTCDBTTT ---TTCTTYCATT-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0377.1 SFL1 Reverse Complement Reverse Complement Forward 7 10 0.0771443 Taxon: Fungi Consensus sequence (original motif): HHVHDHATMGAAGAAAHDWDW Consensus sequence (reverse complement motif): WDWDHTTTCTTCYATHHHVHH Alignment: WDWDHTTTCTTCYATHHHVHH ------TTCTTYCATT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 65 Motif name: Motif 65 Consensus sequence (original motif): TAASTCTWTTTTAA Consensus sequence (reverse complement motif): TTAAAAWAGASTTA ************************************************************************ Best Matches for Motif ID 65 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0390.1 STB3 Reverse Complement Reverse Complement Backward 2 14 0.114359 Taxon: Fungi Consensus sequence (original motif): GBYHAAAWTTTTTCACTBHDD Consensus sequence (reverse complement motif): HHHBAGTGAAAAAWTTTDKVC Alignment: HHHBAGTGAAAAAWTTTDKVC ------TTAAAAWAGASTTA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA1012.1 AGL27 Original Motif Original Motif Backward 2 14 0.118235 Taxon: Plants Consensus sequence (original motif): WCTTTCTATTTTKGG Consensus sequence (reverse complement motif): CCRAAAATAGAAAGW Alignment: WCTTTCTATTTTKGG TAASTCTWTTTTAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0558.1 FLC Reverse Complement Original Motif Forward 7 14 0.118484 Taxon: Plants Consensus sequence (original motif): DDWWDCCVAAAATRGAAAGWH Consensus sequence (reverse complement motif): HWCTTTCKATTTTBGGDWWBD Alignment: DDWWDCCVAAAATRGAAAGWH ------TTAAAAWAGASTTA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0296.1 FKH1 Original Motif Reverse Complement Forward 1 14 0.120709 Taxon: Fungi Consensus sequence (original motif): BDWWWTGTAAACAAAVDDDV Consensus sequence (reverse complement motif): BHHDVTTTGTTTACAWWWHV Alignment: BHHDVTTTGTTTACAWWWHV TAASTCTWTTTTAA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0555.1 SVP Original Motif Reverse Complement Forward 2 14 0.121312 Taxon: Plants Consensus sequence (original motif): VWWHCCAAAAADGGAAARAH Consensus sequence (reverse complement motif): HTMTTTCCDTTTTTGGHWWB Alignment: HTMTTTCCDTTTTTGGHWWB -TAASTCTWTTTTAA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Results created by MOTIFSIM on 11-20-2023 14:18:32 Runtime: 166.142 seconds MOTIFSIM is written by Ngoc Tam L. 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