**************************************************************************************************************************************************************************************************** MOTIFSIM - Motif Similarity Detection Tool Version 2.2 **************************************************************************************************************************************************************************************************** INPUT **************************************************************************************************************************************************************************************************** Input Parameters Number of files: 5 Number of top significant motifs: 5 Number of best matches: 5 Similarity cutoff: >= 0.75 Matching motif database: Jaspar Core Motif tree: Yes Combined similar motifs: Yes Output file type: All Output file format: Text Input files and motif counts File name Count of motifs Dataset # DREME_DM230.txt 1 1 MEME_DM230.txt 20 2 PScanChIP_DM230.txt 14 3 RSAT_peak-motifs_DM230.txt 10 4 W-ChIPMotifs_DM230.txt 11 5 **************************************************************************************************************************************************************************************************** RESULTS **************************************************************************************************************************************************************************************************** ********************************************************************** Best Matches in Database for Each Motif (Highest to Lowest) ***************************************************************** Dataset #: 1 Motif ID: 1 Motif name: Motif 1 Consensus sequence (original motif): GGCGGGGC Consensus sequence (reverse complement motif): GCCCCGCC ************************************************************************ Best Matches for Motif ID 1 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0685.1 SP4 Reverse Complement Original Motif Backward 7 8 0.0250099 Taxon: Vertebrates Consensus sequence (original motif): BWRGCCACGCCCMCTYH Consensus sequence (reverse complement motif): HMAGRGGGCGTGGCKWV Alignment: BWRGCCACGCCCMCTYH ---GCCCCGCC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0516.1 SP2 Original Motif Reverse Complement Forward 8 8 0.0341348 Taxon: Vertebrates Consensus sequence (original motif): GYCCCGCCYCYBBBB Consensus sequence (reverse complement motif): BBBVKGKGGCGGGKC Alignment: BBBVKGKGGCGGGKC -------GGCGGGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0079.3 SP1 Reverse Complement Original Motif Backward 4 8 0.0390899 Taxon: Vertebrates Consensus sequence (original motif): BCCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGGB Alignment: BCCCCKCCCCC GCCCCGCC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0599.1 KLF5 Original Motif Reverse Complement Forward 3 8 0.0426828 Taxon: Vertebrates Consensus sequence (original motif): GCCCCRCCCH Consensus sequence (reverse complement motif): DGGGMGGGGC Alignment: DGGGMGGGGC --GGCGGGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0039.2 Klf4 Original Motif Original Motif Forward 3 8 0.0436298 Taxon: Vertebrates Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: DGGGYGKGGC --GGCGGGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 2 Motif name: Motif 2 Consensus sequence (original motif): RGRAGARRGARRAR Consensus sequence (reverse complement motif): MTMMTCMMTCTKCK ************************************************************************ Best Matches for Motif ID 2 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0528.1 ZNF263 Original Motif Original Motif Forward 3 14 0.00563526 Taxon: Vertebrates Consensus sequence (original motif): GGAGGAGGRRGRGGRGGRRGR Consensus sequence (reverse complement motif): KCMKCCKCCMCMKCCTCCTCC Alignment: GGAGGAGGRRGRGGRGGRRGR --RGRAGARRGARRAR----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0045.1 HMG-I/Y Original Motif Original Motif Backward 2 14 0.0313334 Taxon: Plants Consensus sequence (original motif): VWAVAAAHGVMAAMAY Consensus sequence (reverse complement motif): KTYTTYVCHTTTVTWV Alignment: VWAVAAAHGVMAAMAY -RGRAGARRGARRAR- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0543.1 eor-1 Original Motif Original Motif Backward 1 14 0.037736 Taxon: Nematodes Consensus sequence (original motif): DRAGAGAVRSAGAGA Consensus sequence (reverse complement motif): TCTCTSMVTCTCTMD Alignment: DRAGAGAVRSAGAGA -RGRAGARRGARRAR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0139.1 CTCF Original Motif Original Motif Forward 6 14 0.0462082 Taxon: Vertebrates Consensus sequence (original motif): YDRCCASYAGRKGGCRSYV Consensus sequence (reverse complement motif): BMSMGCCYMCTKSTGGMHM Alignment: YDRCCASYAGRKGGCRSYV -----RGRAGARRGARRAR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0555.1 SVP Original Motif Original Motif Backward 1 14 0.0500427 Taxon: Plants Consensus sequence (original motif): VWWHCCAAAAADGGAAARAH Consensus sequence (reverse complement motif): HTMTTTCCDTTTTTGGHWWB Alignment: VWWHCCAAAAADGGAAARAH ------RGRAGARRGARRAR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 3 Motif name: Motif 3 Consensus sequence (original motif): AWAAAWTWAAASWA Consensus sequence (reverse complement motif): TWSTTTWAWTTTWT ************************************************************************ Best Matches for Motif ID 3 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0555.1 SVP Reverse Complement Reverse Complement Backward 7 14 0.024813 Taxon: Plants Consensus sequence (original motif): VWWHCCAAAAADGGAAARAH Consensus sequence (reverse complement motif): HTMTTTCCDTTTTTGGHWWB Alignment: HTMTTTCCDTTTTTGGHWWB TWSTTTWAWTTTWT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0554.1 SOC1 Original Motif Reverse Complement Backward 4 14 0.0288328 Taxon: Plants Consensus sequence (original motif): TTTYTYTTTYTYTYTYTTTYB Consensus sequence (reverse complement motif): VMAAAMAMAMAMAAAMAMAAA Alignment: VMAAAMAMAMAMAAAMAMAAA ----AWAAAWTWAAASWA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0558.1 FLC Original Motif Original Motif Backward 1 14 0.0358712 Taxon: Plants Consensus sequence (original motif): DDWWDCCVAAAATRGAAAGWH Consensus sequence (reverse complement motif): HWCTTTCKATTTTBGGDWWBD Alignment: DDWWDCCVAAAATRGAAAGWH -------AWAAAWTWAAASWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0346.1 NHP6B Original Motif Reverse Complement Forward 5 14 0.0391335 Taxon: Fungi Consensus sequence (original motif): HHTHHHWATATATWWWRDDV Consensus sequence (reverse complement motif): BHDKWWWATATATWHHHAHH Alignment: BHDKWWWATATATWHHHAHH ----AWAAAWTWAAASWA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0050.2 IRF1 Reverse Complement Original Motif Forward 4 14 0.0398899 Taxon: Vertebrates Consensus sequence (original motif): HBBYASTTTCACTTTCDBTTT Consensus sequence (reverse complement motif): AAABDGAAAGTGAAASTMVHH Alignment: HBBYASTTTCACTTTCDBTTT ---TWSTTTWAWTTTWT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 4 Motif name: Motif 4 Consensus sequence (original motif): AAAAWTTRCWT Consensus sequence (reverse complement motif): AWGKAAWTTTT ************************************************************************ Best Matches for Motif ID 4 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0390.1 STB3 Reverse Complement Original Motif Forward 2 11 0.0463699 Taxon: Fungi Consensus sequence (original motif): GBYHAAAWTTTTTCACTBHDD Consensus sequence (reverse complement motif): HHHBAGTGAAAAAWTTTDKVC Alignment: GBYHAAAWTTTTTCACTBHDD -AWGKAAWTTTT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0378.1 SFP1 Original Motif Original Motif Forward 7 11 0.0523082 Taxon: Fungi Consensus sequence (original motif): DHDDDRAAAAWTTTTYYHBDD Consensus sequence (reverse complement motif): HHBHMKAAAAWTTTTKDHDHD Alignment: DHDDDRAAAAWTTTTYYHBDD ------AAAAWTTRCWT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0573.1 ATHB-9 Reverse Complement Reverse Complement Backward 7 11 0.0676126 Taxon: Plants Consensus sequence (original motif): HDHHGTAATGATTRCDYBS Consensus sequence (reverse complement motif): SBKDGKAATCATTACDHBH Alignment: SBKDGKAATCATTACDHBH --AWGKAAWTTTT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0377.1 SFL1 Reverse Complement Reverse Complement Backward 11 11 0.0697628 Taxon: Fungi Consensus sequence (original motif): HHVHDHATMGAAGAAAHDWDW Consensus sequence (reverse complement motif): WDWDHTTTCTTCYATHHHVHH Alignment: WDWDHTTTCTTCYATHHHVHH AWGKAAWTTTT---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0791.1 POU4F3 Original Motif Reverse Complement Backward 1 11 0.0714694 Taxon: Vertebrates Consensus sequence (original motif): DTGMATWATTAATGHV Consensus sequence (reverse complement motif): VHCATTAATWATRCAD Alignment: VHCATTAATWATRCAD -----AAAAWTTRCWT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 5 Motif name: Motif 5 Consensus sequence (original motif): AWTAAATAYAATTT Consensus sequence (reverse complement motif): AAATTKTATTTAWT ************************************************************************ Best Matches for Motif ID 5 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0869.1 Sox11 Reverse Complement Reverse Complement Forward 2 14 0.0734794 Taxon: Vertebrates Consensus sequence (original motif): AACAATTKCAGTGTT Consensus sequence (reverse complement motif): AACACTGRAATTGTT Alignment: AACACTGRAATTGTT -AAATTKTATTTAWT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0867.1 SOX4 Reverse Complement Reverse Complement Forward 2 14 0.0743815 Taxon: Vertebrates Consensus sequence (original motif): DAACAATTGCAGTGTT Consensus sequence (reverse complement motif): AACACTGCAATTGTTH Alignment: AACACTGCAATTGTTH -AAATTKTATTTAWT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0378.1 SFP1 Reverse Complement Reverse Complement Backward 1 14 0.0787324 Taxon: Fungi Consensus sequence (original motif): DHDDDRAAAAWTTTTYYHBDD Consensus sequence (reverse complement motif): HHBHMKAAAAWTTTTKDHDHD Alignment: HHBHMKAAAAWTTTTKDHDHD -------AAATTKTATTTAWT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0386.1 SPT15 Original Motif Reverse Complement Forward 5 14 0.0787361 Taxon: Fungi Consensus sequence (original motif): VHHHAGDWATATATATDSVHD Consensus sequence (reverse complement motif): DHVSDATATATATWDCTHDHV Alignment: DHVSDATATATATWDCTHDHV ----AWTAAATAYAATTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0866.1 SOX21 Original Motif Original Motif Forward 1 14 0.0801722 Taxon: Vertebrates Consensus sequence (original motif): AACAATKKYAGTGTT Consensus sequence (reverse complement motif): AACACTMYYATTGTT Alignment: AACAATKKYAGTGTT AWTAAATAYAATTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 6 Motif name: Motif 6 Consensus sequence (original motif): AATTYDGAARTAWW Consensus sequence (reverse complement motif): WWTAKTTCDKAATT ************************************************************************ Best Matches for Motif ID 6 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0400.1 SUT2 Reverse Complement Reverse Complement Backward 7 14 0.0872945 Taxon: Fungi Consensus sequence (original motif): HDDHHRAACTCCGAAHHDBD Consensus sequence (reverse complement motif): DVDHHTTCGGAGTTKHHHDH Alignment: DVDHHTTCGGAGTTKHHHDH WWTAKTTCDKAATT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0377.1 SFL1 Original Motif Original Motif Backward 5 14 0.0893001 Taxon: Fungi Consensus sequence (original motif): HHVHDHATMGAAGAAAHDWDW Consensus sequence (reverse complement motif): WDWDHTTTCTTCYATHHHVHH Alignment: HHVHDHATMGAAGAAAHDWDW ---AATTYDGAARTAWW---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0495.1 MAFF Original Motif Original Motif Forward 4 14 0.0903686 Taxon: Vertebrates Consensus sequence (original motif): BCTDASTCAGCADWWTHH Consensus sequence (reverse complement motif): HHAWWDTGCTGASTHAGB Alignment: BCTDASTCAGCADWWTHH ---AATTYDGAARTAWW- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0533.1 su(Hw) Reverse Complement Reverse Complement Forward 2 14 0.0926859 Taxon: Insects Consensus sequence (original motif): GCCBAAAAGTATGCWAYRHWW Consensus sequence (reverse complement motif): WWHKKTWGCATACTTTTBGGC Alignment: WWHKKTWGCATACTTTTBGGC -WWTAKTTCDKAATT------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0415.1 YAP1 Reverse Complement Original Motif Backward 5 14 0.0941066 Taxon: Fungi Consensus sequence (original motif): HBDDDMTTACGTAAKVHHVH Consensus sequence (reverse complement motif): HVDHVYTTACGTAARHDDVH Alignment: HBDDDMTTACGTAAKVHHVH --WWTAKTTCDKAATT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 7 Motif name: Motif 7 Consensus sequence (original motif): CSKCCCCGCCCCSY Consensus sequence (reverse complement motif): MSGGGGCGGGGYSG ************************************************************************ Best Matches for Motif ID 7 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0685.1 SP4 Original Motif Original Motif Backward 3 14 0.0325695 Taxon: Vertebrates Consensus sequence (original motif): BWRGCCACGCCCMCTYH Consensus sequence (reverse complement motif): HMAGRGGGCGTGGCKWV Alignment: BWRGCCACGCCCMCTYH -CSKCCCCGCCCCSY-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0657.1 KLF13 Reverse Complement Reverse Complement Backward 1 14 0.0403353 Taxon: Vertebrates Consensus sequence (original motif): DTGMCACGCCCCTTTTTG Consensus sequence (reverse complement motif): CAAAAAGGGGCGTGRCAD Alignment: CAAAAAGGGGCGTGRCAD ----MSGGGGCGGGGYSG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0162.2 EGR1 Original Motif Original Motif Forward 1 14 0.0584557 Taxon: Vertebrates Consensus sequence (original motif): BCBCCGCCCCCGCV Consensus sequence (reverse complement motif): VGCGGGGGCGGBGB Alignment: BCBCCGCCCCCGCV CSKCCCCGCCCCSY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0395.1 STP2 Reverse Complement Original Motif Forward 4 14 0.0591537 Taxon: Fungi Consensus sequence (original motif): HVVHBGGCGCCGYRYVHHBH Consensus sequence (reverse complement motif): HBDHVKKKCGGCGCCBHBVH Alignment: HVVHBGGCGCCGYRYVHHBH ---MSGGGGCGGGGYSG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0516.1 SP2 Original Motif Original Motif Forward 2 14 0.0623372 Taxon: Vertebrates Consensus sequence (original motif): GYCCCGCCYCYBBBB Consensus sequence (reverse complement motif): BBBVKGKGGCGGGKC Alignment: GYCCCGCCYCYBBBB -CSKCCCCGCCCCSY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 8 Motif name: Motif 8 Consensus sequence (original motif): AAATRWTAAAATCA Consensus sequence (reverse complement motif): TGATTTTAWKATTT ************************************************************************ Best Matches for Motif ID 8 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0729.1 RARA Reverse Complement Reverse Complement Backward 2 14 0.078646 Taxon: Vertebrates Consensus sequence (original motif): GAGGTCAAAAGGTCAAKK Consensus sequence (reverse complement motif): YRTTGACCTTTTGACCTC Alignment: YRTTGACCTTTTGACCTC ---TGATTTTAWKATTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0859.1 Rarg Reverse Complement Reverse Complement Forward 2 14 0.0841021 Taxon: Vertebrates Consensus sequence (original motif): RAGGTCAAAAGGTCAH Consensus sequence (reverse complement motif): HTGACCTTTTGACCTK Alignment: HTGACCTTTTGACCTK -TGATTTTAWKATTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0857.1 Rarb Reverse Complement Reverse Complement Backward 3 14 0.0843848 Taxon: Vertebrates Consensus sequence (original motif): AAAGGTCAAAAGGTCA Consensus sequence (reverse complement motif): TGACCTTTTGACCTTT Alignment: TGACCTTTTGACCTTT TGATTTTAWKATTT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0517.1 STAT1::STAT2 Reverse Complement Original Motif Backward 2 14 0.0902938 Taxon: Vertebrates Consensus sequence (original motif): THAGTTTCDBTTTCY Consensus sequence (reverse complement motif): KGAAAVDGAAACTDA Alignment: THAGTTTCDBTTTCY TGATTTTAWKATTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0050.2 IRF1 Original Motif Reverse Complement Backward 3 14 0.0918712 Taxon: Vertebrates Consensus sequence (original motif): HBBYASTTTCACTTTCDBTTT Consensus sequence (reverse complement motif): AAABDGAAAGTGAAASTMVHH Alignment: AAABDGAAAGTGAAASTMVHH -----AAATRWTAAAATCA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 9 Motif name: Motif 9 Consensus sequence (original motif): AATHATATWTHAAA Consensus sequence (reverse complement motif): TTTDAWATATHATT ************************************************************************ Best Matches for Motif ID 9 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0345.1 NHP6A Reverse Complement Reverse Complement Forward 5 14 0.045914 Taxon: Fungi Consensus sequence (original motif): VHDHHYWHTATATAADDDHDH Consensus sequence (reverse complement motif): HHHDDDTTATATAHWKDHHHB Alignment: HHHDDDTTATATAHWKDHHHB ----TTTDAWATATHATT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0346.1 NHP6B Original Motif Original Motif Forward 4 14 0.0516885 Taxon: Fungi Consensus sequence (original motif): HHTHHHWATATATWWWRDDV Consensus sequence (reverse complement motif): BHDKWWWATATATWHHHAHH Alignment: HHTHHHWATATATWWWRDDV ---AATHATATWTHAAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0050.2 IRF1 Original Motif Reverse Complement Backward 7 14 0.0598286 Taxon: Vertebrates Consensus sequence (original motif): HBBYASTTTCACTTTCDBTTT Consensus sequence (reverse complement motif): AAABDGAAAGTGAAASTMVHH Alignment: AAABDGAAAGTGAAASTMVHH -AATHATATWTHAAA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0001.2 AGL3 Reverse Complement Original Motif Forward 3 14 0.0606281 Taxon: Plants Consensus sequence (original motif): VDTHCCAWWWATAGDWHB Consensus sequence (reverse complement motif): BHWDCTATWWWTGGHADV Alignment: VDTHCCAWWWATAGDWHB --TTTDAWATATHATT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0383.1 SMP1 Reverse Complement Reverse Complement Forward 6 14 0.0618198 Taxon: Fungi Consensus sequence (original motif): BDACCTWTAATTAWAHBWVVD Consensus sequence (reverse complement motif): DVVWVHTWTAATTAWAGGTDV Alignment: DVVWVHTWTAATTAWAGGTDV -----TTTDAWATATHATT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 10 Motif name: Motif 10 Consensus sequence (original motif): TTTCATAAWT Consensus sequence (reverse complement motif): AWTTATGAAA ************************************************************************ Best Matches for Motif ID 10 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0683.1 POU4F2 Reverse Complement Reverse Complement Forward 7 10 0.0571343 Taxon: Vertebrates Consensus sequence (original motif): DTGCATAATTAATGAG Consensus sequence (reverse complement motif): CTCATTAATTATGCAD Alignment: CTCATTAATTATGCAD ------AWTTATGAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0102.3 CEBPA Original Motif Original Motif Backward 1 10 0.0573809 Taxon: Vertebrates Consensus sequence (original motif): ATTGCAYAAYH Consensus sequence (reverse complement motif): HMTTKTGCAAT Alignment: ATTGCAYAAYH -TTTCATAAWT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0547.1 skn-1 Original Motif Reverse Complement Forward 4 10 0.0590786 Taxon: Nematodes Consensus sequence (original motif): AAAATGATGACAAWD Consensus sequence (reverse complement motif): DWTTGTCATCATTTT Alignment: DWTTGTCATCATTTT ---TTTCATAAWT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0843.1 TEF Original Motif Original Motif Forward 3 10 0.0640129 Taxon: Vertebrates Consensus sequence (original motif): BRTTACRTAAYV Consensus sequence (reverse complement motif): BKTTAMGTAAKV Alignment: BRTTACRTAAYV --TTTCATAAWT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0415.1 YAP1 Reverse Complement Reverse Complement Backward 7 10 0.0643778 Taxon: Fungi Consensus sequence (original motif): HBDDDMTTACGTAAKVHHVH Consensus sequence (reverse complement motif): HVDHVYTTACGTAARHDDVH Alignment: HVDHVYTTACGTAARHDDVH ----AWTTATGAAA------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 11 Motif name: Motif 11 Consensus sequence (original motif): ATTTWATGAAA Consensus sequence (reverse complement motif): TTTCATWAAAT ************************************************************************ Best Matches for Motif ID 11 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0906.1 HOXC12 Original Motif Reverse Complement Backward 1 11 0.0786043 Taxon: Vertebrates Consensus sequence (original motif): RGTCGTAAAAH Consensus sequence (reverse complement motif): HTTTTACGACM Alignment: HTTTTACGACM ATTTWATGAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0651.1 HOXC11 Original Motif Reverse Complement Backward 1 11 0.079127 Taxon: Vertebrates Consensus sequence (original motif): DGTCGTAAAAH Consensus sequence (reverse complement motif): HTTTTACGACH Alignment: DGTCGTAAAAH ATTTWATGAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0731.1 BCL6B Original Motif Reverse Complement Forward 4 11 0.0814831 Taxon: Vertebrates Consensus sequence (original motif): TGCTTTCTAGGAATTCM Consensus sequence (reverse complement motif): YGAATTCCTAGAAAGCA Alignment: YGAATTCCTAGAAAGCA ---ATTTWATGAAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0907.1 HOXC13 Reverse Complement Original Motif Backward 1 11 0.0832456 Taxon: Vertebrates Consensus sequence (original motif): BCTCGTAAAAH Consensus sequence (reverse complement motif): HTTTTACGAGB Alignment: BCTCGTAAAAH TTTCATWAAAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0911.1 Hoxa11 Original Motif Reverse Complement Backward 1 11 0.0834977 Taxon: Vertebrates Consensus sequence (original motif): DGTCGTAAAAHD Consensus sequence (reverse complement motif): DHTTTTACGACH Alignment: DHTTTTACGACH -ATTTWATGAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 12 Motif name: Motif 12 Consensus sequence (original motif): AAAACAAA Consensus sequence (reverse complement motif): TTTGTTTT ************************************************************************ Best Matches for Motif ID 12 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0481.1 FOXP1 Original Motif Original Motif Forward 7 8 0.0249742 Taxon: Vertebrates Consensus sequence (original motif): HHDADGTAAACAAAV Consensus sequence (reverse complement motif): VTTTGTTTACDTDHD Alignment: HHDADGTAAACAAAV ------AAAACAAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0296.1 FKH1 Original Motif Original Motif Backward 6 8 0.0269327 Taxon: Fungi Consensus sequence (original motif): BDWWWTGTAAACAAAVDDDV Consensus sequence (reverse complement motif): BHHDVTTTGTTTACAWWWHV Alignment: BDWWWTGTAAACAAAVDDDV -------AAAACAAA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0514.1 Sox3 Original Motif Reverse Complement Backward 3 8 0.0274893 Taxon: Vertebrates Consensus sequence (original motif): CCTTTGTYYY Consensus sequence (reverse complement motif): MMMACAAAGG Alignment: MMMACAAAGG AAAACAAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0852.1 Foxk1 Original Motif Original Motif Backward 4 8 0.034209 Taxon: Vertebrates Consensus sequence (original motif): DDAATGTAAACAAAVVB Consensus sequence (reverse complement motif): BBVTTTGTTTACATTDD Alignment: DDAATGTAAACAAAVVB ------AAAACAAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0851.1 Foxj3 Original Motif Original Motif Backward 4 8 0.0387057 Taxon: Vertebrates Consensus sequence (original motif): HDHADGTAAACAAAVVH Consensus sequence (reverse complement motif): DBVTTTGTTTACDTHDH Alignment: HDHADGTAAACAAAVVH ------AAAACAAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 13 Motif name: Motif 13 Consensus sequence (original motif): AAAGATTT Consensus sequence (reverse complement motif): AAATCTTT ************************************************************************ Best Matches for Motif ID 13 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0435.1 YPR015C Original Motif Reverse Complement Backward 10 8 0.0240145 Taxon: Fungi Consensus sequence (original motif): TBDHDACGTAAATCMTDDHH Consensus sequence (reverse complement motif): HDDDARGATTTACGTHHDBA Alignment: HDDDARGATTTACGTHHDBA ---AAAGATTT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0679.1 ONECUT1 Original Motif Reverse Complement Backward 4 8 0.0257538 Taxon: Vertebrates Consensus sequence (original motif): VAAAAATCRATAHH Consensus sequence (reverse complement motif): HHTATMGATTTTTB Alignment: HHTATMGATTTTTB ---AAAGATTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0756.1 ONECUT2 Original Motif Reverse Complement Forward 4 8 0.0273457 Taxon: Vertebrates Consensus sequence (original motif): VAAAAATCRATAHH Consensus sequence (reverse complement motif): HHTATMGATTTTTB Alignment: HHTATMGATTTTTB ---AAAGATTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0573.1 ATHB-9 Original Motif Original Motif Forward 7 8 0.0329327 Taxon: Plants Consensus sequence (original motif): HDHHGTAATGATTRCDYBS Consensus sequence (reverse complement motif): SBKDGKAATCATTACDHBH Alignment: HDHHGTAATGATTRCDYBS ------AAAGATTT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0378.1 SFP1 Original Motif Original Motif Forward 7 8 0.0332736 Taxon: Fungi Consensus sequence (original motif): DHDDDRAAAAWTTTTYYHBDD Consensus sequence (reverse complement motif): HHBHMKAAAAWTTTTKDHDHD Alignment: DHDDDRAAAAWTTTTYYHBDD ------AAAGATTT------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 14 Motif name: Motif 14 Consensus sequence (original motif): AWAAATAA Consensus sequence (reverse complement motif): TTATTTWT ************************************************************************ Best Matches for Motif ID 14 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0052.3 MEF2A Original Motif Original Motif Backward 2 8 0 Taxon: Vertebrates Consensus sequence (original motif): KCTAWAAATAGM Consensus sequence (reverse complement motif): YCTATTTWTAGR Alignment: KCTAWAAATAGM ---AWAAATAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0773.1 MEF2D Original Motif Original Motif Forward 4 8 7.79237e-05 Taxon: Vertebrates Consensus sequence (original motif): DCTAWAAATAGM Consensus sequence (reverse complement motif): YCTATTTWTAGD Alignment: DCTAWAAATAGM ---AWAAATAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0660.1 MEF2B Original Motif Original Motif Backward 2 8 0.0035733 Taxon: Vertebrates Consensus sequence (original motif): RCTAWAAATAGC Consensus sequence (reverse complement motif): GCTATTTWTAGM Alignment: RCTAWAAATAGC ---AWAAATAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0497.1 MEF2C Original Motif Original Motif Backward 3 8 0.0167824 Taxon: Vertebrates Consensus sequence (original motif): DDDCYAAAAATAGMH Consensus sequence (reverse complement motif): HYCTATTTTTMGHDD Alignment: DDDCYAAAAATAGMH -----AWAAATAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0683.1 POU4F2 Original Motif Original Motif Forward 5 8 0.0276832 Taxon: Vertebrates Consensus sequence (original motif): DTGCATAATTAATGAG Consensus sequence (reverse complement motif): CTCATTAATTATGCAD Alignment: DTGCATAATTAATGAG ----AWAAATAA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 15 Motif name: Motif 15 Consensus sequence (original motif): ATMACAATAAAA Consensus sequence (reverse complement motif): TTTTATTGTYAT ************************************************************************ Best Matches for Motif ID 15 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0050.2 IRF1 Reverse Complement Original Motif Forward 7 12 0.101031 Taxon: Vertebrates Consensus sequence (original motif): HBBYASTTTCACTTTCDBTTT Consensus sequence (reverse complement motif): AAABDGAAAGTGAAASTMVHH Alignment: HBBYASTTTCACTTTCDBTTT ------TTTTATTGTYAT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0497.1 MEF2C Original Motif Original Motif Forward 4 12 0.103068 Taxon: Vertebrates Consensus sequence (original motif): DDDCYAAAAATAGMH Consensus sequence (reverse complement motif): HYCTATTTTTMGHDD Alignment: DDDCYAAAAATAGMH ---ATMACAATAAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0029.1 Mecom Reverse Complement Reverse Complement Backward 1 12 0.106096 Taxon: Vertebrates Consensus sequence (original motif): AAGAYAAGATAABA Consensus sequence (reverse complement motif): TBTTATCTTMTCTT Alignment: TBTTATCTTMTCTT --TTTTATTGTYAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0314.1 HAP3 Original Motif Reverse Complement Backward 1 12 0.106236 Taxon: Fungi Consensus sequence (original motif): TCTSATTGGYYVRRA Consensus sequence (reverse complement motif): TMKVMMCCAATSAGA Alignment: TCTSATTGGYYVRRA ---ATMACAATAAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0070.1 PBX1 Reverse Complement Reverse Complement Forward 1 12 0.106481 Taxon: Vertebrates Consensus sequence (original motif): HBATCAATCAAW Consensus sequence (reverse complement motif): WTTGATTGATBD Alignment: WTTGATTGATBD TTTTATTGTYAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 16 Motif name: Motif 16 Consensus sequence (original motif): ACAAWTRATTTTGA Consensus sequence (reverse complement motif): TCAAAATKAWTTGT ************************************************************************ Best Matches for Motif ID 16 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0868.1 SOX8 Reverse Complement Original Motif Backward 2 14 0.0986809 Taxon: Vertebrates Consensus sequence (original motif): AACAATRTGCAGTGTT Consensus sequence (reverse complement motif): AACACTGCAMATTGTT Alignment: AACAATRTGCAGTGTT -TCAAAATKAWTTGT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0009.2 T Reverse Complement Reverse Complement Backward 3 14 0.10538 Taxon: Vertebrates Consensus sequence (original motif): TCACACVTABGTGTGA Consensus sequence (reverse complement motif): TCACACBTAVGTGTGA Alignment: TCACACBTAVGTGTGA TCAAAATKAWTTGT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0757.1 ONECUT3 Original Motif Reverse Complement Backward 1 14 0.105928 Taxon: Vertebrates Consensus sequence (original motif): VAAAAATCRATAAH Consensus sequence (reverse complement motif): HTTATKGATTTTTB Alignment: VAAAAATCRATAAH ACAAWTRATTTTGA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0804.1 TBX19 Reverse Complement Reverse Complement Backward 5 14 0.108377 Taxon: Vertebrates Consensus sequence (original motif): DTTMRCACVTABGTGTGAAH Consensus sequence (reverse complement motif): HTTCACACBTAVGTGKRAAD Alignment: HTTCACACBTAVGTGKRAAD --TCAAAATKAWTTGT---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0390.1 STB3 Reverse Complement Reverse Complement Backward 2 14 0.113945 Taxon: Fungi Consensus sequence (original motif): GBYHAAAWTTTTTCACTBHDD Consensus sequence (reverse complement motif): HHHBAGTGAAAAAWTTTDKVC Alignment: HHHBAGTGAAAAAWTTTDKVC ------TCAAAATKAWTTGT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 17 Motif name: Motif 17 Consensus sequence (original motif): AAAAATGAAT Consensus sequence (reverse complement motif): ATTCATTTTT ************************************************************************ Best Matches for Motif ID 17 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0757.1 ONECUT3 Reverse Complement Reverse Complement Forward 4 10 0.0366805 Taxon: Vertebrates Consensus sequence (original motif): VAAAAATCRATAAH Consensus sequence (reverse complement motif): HTTATKGATTTTTB Alignment: HTTATKGATTTTTB ---ATTCATTTTT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0756.1 ONECUT2 Original Motif Original Motif Backward 4 10 0.0499406 Taxon: Vertebrates Consensus sequence (original motif): VAAAAATCRATAHH Consensus sequence (reverse complement motif): HHTATMGATTTTTB Alignment: VAAAAATCRATAHH -AAAAATGAAT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0679.1 ONECUT1 Original Motif Original Motif Backward 4 10 0.0503311 Taxon: Vertebrates Consensus sequence (original motif): VAAAAATCRATAHH Consensus sequence (reverse complement motif): HHTATMGATTTTTB Alignment: VAAAAATCRATAHH -AAAAATGAAT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0559.1 PI Reverse Complement Reverse Complement Backward 4 10 0.0592661 Taxon: Plants Consensus sequence (original motif): CCAAAARWRGAAAR Consensus sequence (reverse complement motif): KTTTCMWKTTTTGG Alignment: KTTTCMWKTTTTGG -ATTCATTTTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0050.2 IRF1 Reverse Complement Original Motif Forward 7 10 0.061014 Taxon: Vertebrates Consensus sequence (original motif): HBBYASTTTCACTTTCDBTTT Consensus sequence (reverse complement motif): AAABDGAAAGTGAAASTMVHH Alignment: HBBYASTTTCACTTTCDBTTT ------ATTCATTTTT----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 18 Motif name: Motif 18 Consensus sequence (original motif): TTAGWTWATAA Consensus sequence (reverse complement motif): TTATWAWCTAA ************************************************************************ Best Matches for Motif ID 18 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0683.1 POU4F2 Reverse Complement Reverse Complement Forward 2 11 0.0672954 Taxon: Vertebrates Consensus sequence (original motif): DTGCATAATTAATGAG Consensus sequence (reverse complement motif): CTCATTAATTATGCAD Alignment: CTCATTAATTATGCAD -TTATWAWCTAA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0046.2 HNF1A Reverse Complement Reverse Complement Backward 3 11 0.0732764 Taxon: Vertebrates Consensus sequence (original motif): DRTTAATVATTAACH Consensus sequence (reverse complement motif): HGTTAATVATTAAMD Alignment: HGTTAATVATTAAMD --TTATWAWCTAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0153.2 HNF1B Reverse Complement Reverse Complement Backward 2 11 0.0744631 Taxon: Vertebrates Consensus sequence (original motif): GTTAATVATTAAY Consensus sequence (reverse complement motif): KTTAATVATTAAC Alignment: KTTAATVATTAAC -TTATWAWCTAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0296.1 FKH1 Reverse Complement Original Motif Backward 6 11 0.074709 Taxon: Fungi Consensus sequence (original motif): BDWWWTGTAAACAAAVDDDV Consensus sequence (reverse complement motif): BHHDVTTTGTTTACAWWWHV Alignment: BDWWWTGTAAACAAAVDDDV ----TTATWAWCTAA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0135.1 Lhx3 Reverse Complement Original Motif Forward 1 11 0.075 Taxon: Vertebrates Consensus sequence (original motif): WAATTAATTAWYB Consensus sequence (reverse complement motif): BMWTAATTAATTW Alignment: WAATTAATTAWYB TTATWAWCTAA-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 19 Motif name: Motif 19 Consensus sequence (original motif): TTCWTAGATTAWA Consensus sequence (reverse complement motif): TWTAATCTAWGAA ************************************************************************ Best Matches for Motif ID 19 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0731.1 BCL6B Reverse Complement Original Motif Backward 5 13 0.0706727 Taxon: Vertebrates Consensus sequence (original motif): TGCTTTCTAGGAATTCM Consensus sequence (reverse complement motif): YGAATTCCTAGAAAGCA Alignment: TGCTTTCTAGGAATTCM TWTAATCTAWGAA---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0756.1 ONECUT2 Original Motif Reverse Complement Forward 1 13 0.0747964 Taxon: Vertebrates Consensus sequence (original motif): VAAAAATCRATAHH Consensus sequence (reverse complement motif): HHTATMGATTTTTB Alignment: VAAAAATCRATAHH TTCWTAGATTAWA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0683.1 POU4F2 Original Motif Reverse Complement Forward 1 13 0.0766449 Taxon: Vertebrates Consensus sequence (original motif): DTGCATAATTAATGAG Consensus sequence (reverse complement motif): CTCATTAATTATGCAD Alignment: DTGCATAATTAATGAG TTCWTAGATTAWA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0679.1 ONECUT1 Original Motif Reverse Complement Forward 1 13 0.0773773 Taxon: Vertebrates Consensus sequence (original motif): VAAAAATCRATAHH Consensus sequence (reverse complement motif): HHTATMGATTTTTB Alignment: HHTATMGATTTTTB TTCWTAGATTAWA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0407.1 THI2 Original Motif Reverse Complement Forward 2 13 0.0791413 Taxon: Fungi Consensus sequence (original motif): GGMAACYSWAAGARC Consensus sequence (reverse complement motif): GKTCTTWSMGTTYCC Alignment: GKTCTTWSMGTTYCC -TTCWTAGATTAWA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 20 Motif name: Motif 20 Consensus sequence (original motif): TTMAAAGATTT Consensus sequence (reverse complement motif): AAATCTTTYAA ************************************************************************ Best Matches for Motif ID 20 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0731.1 BCL6B Original Motif Original Motif Forward 5 11 0.0492255 Taxon: Vertebrates Consensus sequence (original motif): TGCTTTCTAGGAATTCM Consensus sequence (reverse complement motif): YGAATTCCTAGAAAGCA Alignment: TGCTTTCTAGGAATTCM ----TTMAAAGATTT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0390.1 STB3 Reverse Complement Original Motif Forward 6 11 0.053648 Taxon: Fungi Consensus sequence (original motif): GBYHAAAWTTTTTCACTBHDD Consensus sequence (reverse complement motif): HHHBAGTGAAAAAWTTTDKVC Alignment: GBYHAAAWTTTTTCACTBHDD -----AAATCTTTYAA----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0435.1 YPR015C Original Motif Reverse Complement Backward 10 11 0.0560869 Taxon: Fungi Consensus sequence (original motif): TBDHDACGTAAATCMTDDHH Consensus sequence (reverse complement motif): HDDDARGATTTACGTHHDBA Alignment: HDDDARGATTTACGTHHDBA TTMAAAGATTT--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0452.2 Kr Original Motif Reverse Complement Backward 4 11 0.0594262 Taxon: Insects Consensus sequence (original motif): BTYAACCCTTTBHB Consensus sequence (reverse complement motif): BHVAAAGGGTTMAV Alignment: BHVAAAGGGTTMAV TTMAAAGATTT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0378.1 SFP1 Reverse Complement Original Motif Forward 8 11 0.0608143 Taxon: Fungi Consensus sequence (original motif): DHDDDRAAAAWTTTTYYHBDD Consensus sequence (reverse complement motif): HHBHMKAAAAWTTTTKDHDHD Alignment: DHDDDRAAAAWTTTTYYHBDD -------AAATCTTTYAA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 21 Motif name: Motif 21 Consensus sequence (original motif): ATAAAA Consensus sequence (reverse complement motif): TTTTAT ************************************************************************ Best Matches for Motif ID 21 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0465.1 CDX2 Original Motif Original Motif Backward 1 6 0.0152369 Taxon: Vertebrates Consensus sequence (original motif): VDGYMATAAAA Consensus sequence (reverse complement motif): TTTTATRKCDB Alignment: VDGYMATAAAA -----ATAAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0909.1 HOXD13 Original Motif Original Motif Backward 2 6 0.0174801 Taxon: Vertebrates Consensus sequence (original motif): CYMATAAAAH Consensus sequence (reverse complement motif): HTTTTATYKG Alignment: CYMATAAAAH ---ATAAAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0216.2 cad Original Motif Original Motif Forward 5 6 0.0183456 Taxon: Insects Consensus sequence (original motif): RGYMATAAAAM Consensus sequence (reverse complement motif): YTTTTATRKCM Alignment: RGYMATAAAAM ----ATAAAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0901.1 HOXB13 Reverse Complement Reverse Complement Forward 2 6 0.0202721 Taxon: Vertebrates Consensus sequence (original motif): CCAATAAAAH Consensus sequence (reverse complement motif): DTTTTATTGG Alignment: DTTTTATTGG -TTTTAT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0650.1 HOXA13 Reverse Complement Reverse Complement Forward 2 6 0.0269942 Taxon: Vertebrates Consensus sequence (original motif): CYAATAAAAH Consensus sequence (reverse complement motif): HTTTTATTKG Alignment: HTTTTATTKG -TTTTAT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 22 Motif name: Zfx Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB ************************************************************************ Best Matches for Motif ID 22 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0146.2 Zfx Reverse Complement Reverse Complement Backward 1 14 0 Taxon: Vertebrates Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: VAGGCCBBGGCVBB VAGGCCBBGGCVBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0535.1 Mad Original Motif Reverse Complement Backward 1 14 0.0879395 Taxon: Insects Consensus sequence (original motif): SHGRCGCCGVCGBHG Consensus sequence (reverse complement motif): CDBCGVCGGCGMCHS Alignment: SHGRCGCCGVCGBHG -BBVGCCBVGGCCTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0273.1 ARO80 Original Motif Original Motif Backward 6 14 0.099072 Taxon: Fungi Consensus sequence (original motif): GVBVVHKCTCGGBAABDHHDH Consensus sequence (reverse complement motif): HHHHDBTTBCCGAGRHBBVBC Alignment: GVBVVHKCTCGGBAABDHHDH --BBVGCCBVGGCCTV----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0395.1 STP2 Reverse Complement Original Motif Forward 6 14 0.0996402 Taxon: Fungi Consensus sequence (original motif): HVVHBGGCGCCGYRYVHHBH Consensus sequence (reverse complement motif): HBDHVKKKCGGCGCCBHBVH Alignment: HVVHBGGCGCCGYRYVHHBH -----VAGGCCBBGGCVBB- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0505.1 Nr5a2 Reverse Complement Reverse Complement Backward 1 14 0.100127 Taxon: Vertebrates Consensus sequence (original motif): RAGBTCAAGGYCABB Consensus sequence (reverse complement motif): BBTGMCCTTGAVCTK Alignment: BBTGMCCTTGAVCTK -VAGGCCBBGGCVBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 23 Motif name: Egr1 Consensus sequence (original motif): HGCGTGGGCGK Consensus sequence (reverse complement motif): YCGCCCACGCH ************************************************************************ Best Matches for Motif ID 23 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0472.2 EGR2 Original Motif Reverse Complement Backward 1 11 0.00525192 Taxon: Vertebrates Consensus sequence (original motif): MCGCCCACGCA Consensus sequence (reverse complement motif): TGCGTGGGCGY Alignment: TGCGTGGGCGY HGCGTGGGCGK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0733.1 EGR4 Original Motif Reverse Complement Backward 3 11 0.0117235 Taxon: Vertebrates Consensus sequence (original motif): HHMCGCCCACGCAHHH Consensus sequence (reverse complement motif): HHHTGCGTGGGCGYHH Alignment: HHHTGCGTGGGCGYHH ---HGCGTGGGCGK-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0732.1 EGR3 Original Motif Reverse Complement Forward 3 11 0.0129865 Taxon: Vertebrates Consensus sequence (original motif): HHMCGCCCACGCAHH Consensus sequence (reverse complement motif): HDTGCGTGGGCGYHD Alignment: HDTGCGTGGGCGYHD --HGCGTGGGCGK-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0162.2 EGR1 Reverse Complement Original Motif Forward 4 11 0.0188184 Taxon: Vertebrates Consensus sequence (original motif): BCBCCGCCCCCGCV Consensus sequence (reverse complement motif): VGCGGGGGCGGBGB Alignment: BCBCCGCCCCCGCV ---YCGCCCACGCH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0735.1 GLIS1 Reverse Complement Original Motif Forward 4 11 0.0379559 Taxon: Vertebrates Consensus sequence (original motif): MGACCCCCCACGAWGB Consensus sequence (reverse complement motif): BCWTCGTGGGGGGTCY Alignment: MGACCCCCCACGAWGB ---YCGCCCACGCH-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 24 Motif name: SP1 Consensus sequence (original motif): CCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGG ************************************************************************ Best Matches for Motif ID 24 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0079.3 SP1 Reverse Complement Reverse Complement Backward 2 10 0.00266168 Taxon: Vertebrates Consensus sequence (original motif): BCCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGGB Alignment: GGGGGYGGGGB GGGGGYGGGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0516.1 SP2 Original Motif Original Motif Forward 2 10 0.0121285 Taxon: Vertebrates Consensus sequence (original motif): GYCCCGCCYCYBBBB Consensus sequence (reverse complement motif): BBBVKGKGGCGGGKC Alignment: GYCCCGCCYCYBBBB -CCCCKCCCCC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0162.2 EGR1 Reverse Complement Reverse Complement Backward 2 10 0.0215624 Taxon: Vertebrates Consensus sequence (original motif): BCBCCGCCCCCGCV Consensus sequence (reverse complement motif): VGCGGGGGCGGBGB Alignment: VGCGGGGGCGGBGB ---GGGGGYGGGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0746.1 SP3 Original Motif Original Motif Forward 2 10 0.0288701 Taxon: Vertebrates Consensus sequence (original motif): VCCACGCCCMC Consensus sequence (reverse complement motif): GRGGGCGTGGV Alignment: VCCACGCCCMC -CCCCKCCCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0741.1 KLF16 Original Motif Original Motif Backward 1 10 0.0297085 Taxon: Vertebrates Consensus sequence (original motif): GMCACGCCCCC Consensus sequence (reverse complement motif): GGGGGCGTGRC Alignment: GMCACGCCCCC -CCCCKCCCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 25 Motif name: TFAP2A Consensus sequence (original motif): GCCBBVRGS Consensus sequence (reverse complement motif): SCMVBBGGC ************************************************************************ Best Matches for Motif ID 25 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0872.1 TFAP2A(var.3) Original Motif Original Motif Backward 4 9 0.0296627 Taxon: Vertebrates Consensus sequence (original motif): TGCCCYBRGGGCA Consensus sequence (reverse complement motif): TGCCCKBMGGGCA Alignment: TGCCCYBRGGGCA -GCCBBVRGS--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0524.2 TFAP2C Original Motif Original Motif Backward 3 9 0.0297454 Taxon: Vertebrates Consensus sequence (original motif): HGCCYBVRGGCA Consensus sequence (reverse complement motif): TGCCMBBKGGCH Alignment: HGCCYBVRGGCA -GCCBBVRGS-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0146.2 Zfx Original Motif Reverse Complement Backward 3 9 0.0308313 Taxon: Vertebrates Consensus sequence (original motif): BBVGCCBVGGCCTV Consensus sequence (reverse complement motif): VAGGCCBBGGCVBB Alignment: VAGGCCBBGGCVBB ---GCCBBVRGS-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0810.1 TFAP2A(var.2) Original Motif Original Motif Forward 2 9 0.0315022 Taxon: Vertebrates Consensus sequence (original motif): YGCCCBVRGGCD Consensus sequence (reverse complement motif): DGCCMVBGGGCM Alignment: YGCCCBVRGGCD -GCCBBVRGS-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0811.1 TFAP2B Original Motif Original Motif Backward 3 9 0.0315038 Taxon: Vertebrates Consensus sequence (original motif): HGCCCBVRGGCA Consensus sequence (reverse complement motif): TGCCMBBGGGCH Alignment: HGCCCBVRGGCA -GCCBBVRGS-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 26 Motif name: MIZF Consensus sequence (original motif): BAACGTCCGC Consensus sequence (reverse complement motif): GCGGACGTTV ************************************************************************ Best Matches for Motif ID 26 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0131.2 HINFP Original Motif Original Motif Forward 1 10 0.017593 Taxon: Vertebrates Consensus sequence (original motif): CVRCGTCCGCDB Consensus sequence (reverse complement motif): BHGCGGACGKBG Alignment: CVRCGTCCGCDB BAACGTCCGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0640.1 ELF3 Original Motif Reverse Complement Backward 4 10 0.041798 Taxon: Vertebrates Consensus sequence (original motif): WACCCGGAAGTAD Consensus sequence (reverse complement motif): DTACTTCCGGGTW Alignment: DTACTTCCGGGTW BAACGTCCGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0400.1 SUT2 Reverse Complement Reverse Complement Backward 5 10 0.0463449 Taxon: Fungi Consensus sequence (original motif): HDDHHRAACTCCGAAHHDBD Consensus sequence (reverse complement motif): DVDHHTTCGGAGTTKHHHDH Alignment: DVDHHTTCGGAGTTKHHHDH ------GCGGACGTTV---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0588.1 TGA1 Reverse Complement Original Motif Backward 1 10 0.0489152 Taxon: Plants Consensus sequence (original motif): BGVTGACGTDD Consensus sequence (reverse complement motif): DBACGTCAVCV Alignment: DBACGTCAVCV -GCGGACGTTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0439.1 YRR1 Original Motif Original Motif Backward 1 10 0.0501225 Taxon: Fungi Consensus sequence (original motif): VTTATHTCCGY Consensus sequence (reverse complement motif): KCGGADATAAV Alignment: VTTATHTCCGY -BAACGTCCGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 27 Motif name: Klf4 Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD ************************************************************************ Best Matches for Motif ID 27 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0039.2 Klf4 Original Motif Original Motif Backward 1 10 0 Taxon: Vertebrates Consensus sequence (original motif): DGGGYGKGGC Consensus sequence (reverse complement motif): GCCYCMCCCD Alignment: DGGGYGKGGC DGGGYGKGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0599.1 KLF5 Original Motif Reverse Complement Forward 1 10 0.0320559 Taxon: Vertebrates Consensus sequence (original motif): GCCCCRCCCH Consensus sequence (reverse complement motif): DGGGMGGGGC Alignment: GCCCCRCCCH DGGGYGKGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0493.1 Klf1 Original Motif Reverse Complement Forward 1 10 0.043336 Taxon: Vertebrates Consensus sequence (original motif): DRCCACACCCW Consensus sequence (reverse complement motif): WGGGTGTGGMH Alignment: DRCCACACCCW DGGGYGKGGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0685.1 SP4 Original Motif Reverse Complement Backward 4 10 0.0491167 Taxon: Vertebrates Consensus sequence (original motif): BWRGCCACGCCCMCTYH Consensus sequence (reverse complement motif): HMAGRGGGCGTGGCKWV Alignment: HMAGRGGGCGTGGCKWV ----DGGGYGKGGC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0079.3 SP1 Original Motif Reverse Complement Forward 2 10 0.0499947 Taxon: Vertebrates Consensus sequence (original motif): BCCCCKCCCCC Consensus sequence (reverse complement motif): GGGGGYGGGGB Alignment: GGGGGYGGGGB -DGGGYGKGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 28 Motif name: E2F1 Consensus sequence (original motif): TTTSGCGC Consensus sequence (reverse complement motif): GCGCSAAA ************************************************************************ Best Matches for Motif ID 28 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0541.1 efl-1 Original Motif Reverse Complement Forward 3 8 0.0245314 Taxon: Nematodes Consensus sequence (original motif): HDHDSGCGSGAAAWT Consensus sequence (reverse complement motif): AWTTTCSCGCSHDHD Alignment: AWTTTCSCGCSHDHD --TTTSGCGC----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0758.1 E2F7 Reverse Complement Original Motif Backward 2 8 0.0369908 Taxon: Vertebrates Consensus sequence (original motif): TTTTCCCGCCAAAA Consensus sequence (reverse complement motif): TTTTGGCGGGAAAA Alignment: TTTTCCCGCCAAAA -----GCGCSAAA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0865.1 E2F8 Reverse Complement Original Motif Forward 5 8 0.0417765 Taxon: Vertebrates Consensus sequence (original motif): TTTCCCGCCAAA Consensus sequence (reverse complement motif): TTTGGCGGGAAA Alignment: TTTCCCGCCAAA ----GCGCSAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0024.3 E2F1 Reverse Complement Original Motif Backward 1 8 0.0442659 Taxon: Vertebrates Consensus sequence (original motif): TTTGGCGCCAAA Consensus sequence (reverse complement motif): TTTGGCGCCAAA Alignment: TTTGGCGCCAAA ----GCGCSAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0401.1 SWI4 Reverse Complement Original Motif Backward 1 8 0.056511 Taxon: Fungi Consensus sequence (original motif): ACGCGAAA Consensus sequence (reverse complement motif): TTTCGCGT Alignment: ACGCGAAA GCGCSAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 29 Motif name: HIF1AARNT Consensus sequence (original motif): VBACGTGV Consensus sequence (reverse complement motif): VCACGTBV ************************************************************************ Best Matches for Motif ID 29 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0259.1 ARNT::HIF1A Original Motif Original Motif Forward 1 8 0 Taxon: Vertebrates Consensus sequence (original motif): VBACGTGV Consensus sequence (reverse complement motif): VCACGTBV Alignment: VBACGTGV VBACGTGV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0825.1 MNT Original Motif Original Motif Backward 2 8 0.0396836 Taxon: Vertebrates Consensus sequence (original motif): DVCACGTGVH Consensus sequence (reverse complement motif): DVCACGTGVD Alignment: DVCACGTGVH -VBACGTGV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA1025.1 HBI1 Reverse Complement Original Motif Backward 2 8 0.0426999 Taxon: Plants Consensus sequence (original motif): BBBGCACGTGVB Consensus sequence (reverse complement motif): DVCACGTGCBBB Alignment: BBBGCACGTGVB ---VCACGTBV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0958.1 BHLH13 Original Motif Original Motif Backward 1 8 0.0437556 Taxon: Plants Consensus sequence (original motif): RCACGTGC Consensus sequence (reverse complement motif): GCACGTGM Alignment: RCACGTGC VBACGTGV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0966.1 BIM3 Original Motif Reverse Complement Backward 2 8 0.0441394 Taxon: Plants Consensus sequence (original motif): DBCACGTGVH Consensus sequence (reverse complement motif): HVCACGTGBD Alignment: HVCACGTGBD -VBACGTGV- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 30 Motif name: PLAG1 Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC ************************************************************************ Best Matches for Motif ID 30 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0163.1 PLAG1 Original Motif Original Motif Backward 1 14 0 Taxon: Vertebrates Consensus sequence (original motif): GGGGCCCAAGGGGG Consensus sequence (reverse complement motif): CCCCCTTGGGCCCC Alignment: GGGGCCCAAGGGGG GGGGCCCAAGGGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0116.1 Znf423 Original Motif Original Motif Forward 1 14 0.101371 Taxon: Vertebrates Consensus sequence (original motif): GSMMCCYARGGKKKC Consensus sequence (reverse complement motif): GYRYCCMTKGGYRSC Alignment: GSMMCCYARGGKKKC GGGGCCCAAGGGGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0504.1 NR2C2 Original Motif Original Motif Backward 1 14 0.105478 Taxon: Vertebrates Consensus sequence (original motif): VGRGGTCARAGGTCA Consensus sequence (reverse complement motif): TGACCTMTGACCMCB Alignment: VGRGGTCARAGGTCA -GGGGCCCAAGGGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0139.1 CTCF Reverse Complement Reverse Complement Backward 1 14 0.105487 Taxon: Vertebrates Consensus sequence (original motif): YDRCCASYAGRKGGCRSYV Consensus sequence (reverse complement motif): BMSMGCCYMCTKSTGGMHM Alignment: BMSMGCCYMCTKSTGGMHM -----CCCCCTTGGGCCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0073.1 RREB1 Reverse Complement Original Motif Backward 7 14 0.109758 Taxon: Vertebrates Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: CCCCMAAMCAMCCMCMMMCV CCCCCTTGGGCCCC------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 31 Motif name: Pax5 Consensus sequence (original motif): DGVBCABTGDWGCGKRRCSR Consensus sequence (reverse complement motif): MSGKKRCGCWDCABTGBBCD ************************************************************************ Best Matches for Motif ID 31 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0395.1 STP2 Original Motif Original Motif Backward 1 20 0.0474871 Taxon: Fungi Consensus sequence (original motif): HVVHBGGCGCCGYRYVHHBH Consensus sequence (reverse complement motif): HBDHVKKKCGGCGCCBHBVH Alignment: HVVHBGGCGCCGYRYVHHBH DGVBCABTGDWGCGKRRCSR ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0351.1 DOT6 Reverse Complement Reverse Complement Forward 1 20 0.0524078 Taxon: Fungi Consensus sequence (original motif): DBBBDBWSCTCATCGCVHBBD Consensus sequence (reverse complement motif): DBBHBGCGATGAGSWBHVBVD Alignment: DBBHBGCGATGAGSWBHVBVD MSGKKRCGCWDCABTGBBCD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0377.1 SFL1 Reverse Complement Reverse Complement Forward 1 20 0.0533034 Taxon: Fungi Consensus sequence (original motif): HHVHDHATMGAAGAAAHDWDW Consensus sequence (reverse complement motif): WDWDHTTTCTTCYATHHHVHH Alignment: WDWDHTTTCTTCYATHHHVHH MSGKKRCGCWDCABTGBBCD- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0303.1 GCN4 Reverse Complement Original Motif Backward 1 20 0.0547496 Taxon: Fungi Consensus sequence (original motif): BVHDDDRTGASTCAYHHHHVD Consensus sequence (reverse complement motif): DVHHDHMTGASTCAKHHHHBB Alignment: DVHHDHMTGASTCAKHHHHBB -MSGKKRCGCWDCABTGBBCD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0273.1 ARO80 Reverse Complement Original Motif Forward 2 20 0.0582152 Taxon: Fungi Consensus sequence (original motif): GVBVVHKCTCGGBAABDHHDH Consensus sequence (reverse complement motif): HHHHDBTTBCCGAGRHBBVBC Alignment: GVBVVHKCTCGGBAABDHHDH -MSGKKRCGCWDCABTGBBCD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 32 Motif name: ArntAhr Consensus sequence (original motif): YGCGTG Consensus sequence (reverse complement motif): CACGCM ************************************************************************ Best Matches for Motif ID 32 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0006.1 Ahr::Arnt Original Motif Original Motif Backward 1 6 0 Taxon: Vertebrates Consensus sequence (original motif): YGCGTG Consensus sequence (reverse complement motif): CACGCM Alignment: YGCGTG YGCGTG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0472.2 EGR2 Reverse Complement Original Motif Forward 6 6 0.0252634 Taxon: Vertebrates Consensus sequence (original motif): MCGCCCACGCA Consensus sequence (reverse complement motif): TGCGTGGGCGY Alignment: MCGCCCACGCA -----CACGCM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0781.1 PAX9 Original Motif Reverse Complement Backward 4 6 0.0283428 Taxon: Vertebrates Consensus sequence (original motif): CGTCACGCWTGAVTGMH Consensus sequence (reverse complement motif): HRCAVTCAWGCGTGACG Alignment: HRCAVTCAWGCGTGACG --------YGCGTG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0732.1 EGR3 Reverse Complement Original Motif Forward 8 6 0.0336734 Taxon: Vertebrates Consensus sequence (original motif): HHMCGCCCACGCAHH Consensus sequence (reverse complement motif): HDTGCGTGGGCGYHD Alignment: HHMCGCCCACGCAHH -------CACGCM-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0939.1 NAC080 Original Motif Reverse Complement Backward 2 6 0.0350426 Taxon: Plants Consensus sequence (original motif): ACACGCAA Consensus sequence (reverse complement motif): TTGCGTGT Alignment: TTGCGTGT -YGCGTG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 33 Motif name: Mycn Consensus sequence (original motif): HSCACGTGGC Consensus sequence (reverse complement motif): GCCACGTGSD ************************************************************************ Best Matches for Motif ID 33 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0059.1 MAX::MYC Original Motif Original Motif Forward 2 10 0.00948576 Taxon: Vertebrates Consensus sequence (original motif): RASCACGTGGT Consensus sequence (reverse complement motif): ACCACGTGSTM Alignment: RASCACGTGGT -HSCACGTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0058.3 MAX Original Motif Reverse Complement Backward 1 10 0.0110762 Taxon: Vertebrates Consensus sequence (original motif): VVCACGTGBH Consensus sequence (reverse complement motif): HBCACGTGVB Alignment: VVCACGTGBH HSCACGTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0825.1 MNT Original Motif Original Motif Forward 1 10 0.0134675 Taxon: Vertebrates Consensus sequence (original motif): DVCACGTGVH Consensus sequence (reverse complement motif): DVCACGTGVD Alignment: DVCACGTGVH HSCACGTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0464.2 BHLHE40 Reverse Complement Reverse Complement Backward 1 10 0.0152991 Taxon: Vertebrates Consensus sequence (original motif): VKCACGTGMC Consensus sequence (reverse complement motif): GYCACGTGRB Alignment: GYCACGTGRB GCCACGTGSD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0626.1 Npas2 Original Motif Original Motif Backward 1 10 0.0154673 Taxon: Vertebrates Consensus sequence (original motif): DSCACGTGTH Consensus sequence (reverse complement motif): DACACGTGSH Alignment: DSCACGTGTH HSCACGTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 34 Motif name: Myc Consensus sequence (original motif): VGCACGTGGH Consensus sequence (reverse complement motif): DCCACGTGCV ************************************************************************ Best Matches for Motif ID 34 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0059.1 MAX::MYC Original Motif Original Motif Forward 2 10 0.010886 Taxon: Vertebrates Consensus sequence (original motif): RASCACGTGGT Consensus sequence (reverse complement motif): ACCACGTGSTM Alignment: RASCACGTGGT -VGCACGTGGH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0058.3 MAX Original Motif Reverse Complement Backward 1 10 0.0125993 Taxon: Vertebrates Consensus sequence (original motif): VVCACGTGBH Consensus sequence (reverse complement motif): HBCACGTGVB Alignment: VVCACGTGBH VGCACGTGGH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0825.1 MNT Original Motif Original Motif Backward 1 10 0.0149523 Taxon: Vertebrates Consensus sequence (original motif): DVCACGTGVH Consensus sequence (reverse complement motif): DVCACGTGVD Alignment: DVCACGTGVH VGCACGTGGH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0626.1 Npas2 Original Motif Original Motif Forward 1 10 0.0164648 Taxon: Vertebrates Consensus sequence (original motif): DSCACGTGTH Consensus sequence (reverse complement motif): DACACGTGSH Alignment: DSCACGTGTH VGCACGTGGH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0550.1 BZR1 Original Motif Reverse Complement Forward 3 10 0.0167385 Taxon: Plants Consensus sequence (original motif): MVDMCACGTGDVHA Consensus sequence (reverse complement motif): TDVDCACGTGRHBY Alignment: TDVDCACGTGRHBY --VGCACGTGGH-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 35 Motif name: GABPA Consensus sequence (original motif): CCGGAAGTGVV Consensus sequence (reverse complement motif): VVCACTTCCGG ************************************************************************ Best Matches for Motif ID 35 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0062.2 Gabpa Original Motif Original Motif Forward 1 11 0 Taxon: Vertebrates Consensus sequence (original motif): CCGGAAGTGVV Consensus sequence (reverse complement motif): VVCACTTCCGG Alignment: CCGGAAGTGVV CCGGAAGTGVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0413.1 USV1 Reverse Complement Reverse Complement Backward 9 11 0.0760942 Taxon: Fungi Consensus sequence (original motif): DDDTTMCCCCTGAAHHDBDV Consensus sequence (reverse complement motif): VDBDHHTTCAGGGGRAADDD Alignment: VDBDHHTTCAGGGGRAADDD -VVCACTTCCGG-------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0532.1 Stat92E Original Motif Reverse Complement Backward 1 11 0.079673 Taxon: Insects Consensus sequence (original motif): BVVAWTTCYDRGAAW Consensus sequence (reverse complement motif): WTTCMDKGAAWTVVB Alignment: WTTCMDKGAAWTVVB ----CCGGAAGTGVV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0308.1 GSM1 Reverse Complement Original Motif Backward 7 11 0.0808065 Taxon: Fungi Consensus sequence (original motif): HBHDDDWADCTCCGGAVBDDH Consensus sequence (reverse complement motif): HDDVVTCCGGAGDTWDDDHVH Alignment: HBHDDDWADCTCCGGAVBDDH ----VVCACTTCCGG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0571.1 ANT Reverse Complement Reverse Complement Backward 11 11 0.082338 Taxon: Plants Consensus sequence (original motif): DBGCACRVWTCCCVAKGYDHA Consensus sequence (reverse complement motif): THHMCYTVGGGAWVKGTGCBH Alignment: THHMCYTVGGGAWVKGTGCBH VVCACTTCCGG---------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 36 Motif name: csGCCCCGCCCCsc Consensus sequence (original motif): HVGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCVD ************************************************************************ Best Matches for Motif ID 36 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0685.1 SP4 Original Motif Original Motif Backward 3 14 0.0227905 Taxon: Vertebrates Consensus sequence (original motif): BWRGCCACGCCCMCTYH Consensus sequence (reverse complement motif): HMAGRGGGCGTGGCKWV Alignment: BWRGCCACGCCCMCTYH -HVGCCCCGCCCCBB-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0657.1 KLF13 Original Motif Original Motif Forward 1 14 0.0317744 Taxon: Vertebrates Consensus sequence (original motif): DTGMCACGCCCCTTTTTG Consensus sequence (reverse complement motif): CAAAAAGGGGCGTGRCAD Alignment: DTGMCACGCCCCTTTTTG HVGCCCCGCCCCBB---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0395.1 STP2 Reverse Complement Reverse Complement Backward 5 14 0.0443426 Taxon: Fungi Consensus sequence (original motif): HVVHBGGCGCCGYRYVHHBH Consensus sequence (reverse complement motif): HBDHVKKKCGGCGCCBHBVH Alignment: HBDHVKKKCGGCGCCBHBVH --BBGGGGCGGGGCVD---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0162.2 EGR1 Original Motif Original Motif Backward 1 14 0.0548079 Taxon: Vertebrates Consensus sequence (original motif): BCBCCGCCCCCGCV Consensus sequence (reverse complement motif): VGCGGGGGCGGBGB Alignment: BCBCCGCCCCCGCV HVGCCCCGCCCCBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0638.1 CREB3 Reverse Complement Reverse Complement Forward 1 14 0.0595088 Taxon: Vertebrates Consensus sequence (original motif): VTGCCACGTCAYCV Consensus sequence (reverse complement motif): BGMTGACGTGGCAV Alignment: BGMTGACGTGGCAV BBGGGGCGGGGCVD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 37 Motif name: tkAAATAATAtw Consensus sequence (original motif): HDAAATAATAHW Consensus sequence (reverse complement motif): WHTATTATTTDH ************************************************************************ Best Matches for Motif ID 37 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0910.1 Hoxd8 Original Motif Original Motif Backward 3 12 0.0261974 Taxon: Vertebrates Consensus sequence (original motif): TAADTAATTAATRGHTH Consensus sequence (reverse complement motif): HADCMATTAATTADTTA Alignment: TAADTAATTAATRGHTH ---HDAAATAATAHW-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0383.1 SMP1 Reverse Complement Reverse Complement Forward 5 12 0.0286836 Taxon: Fungi Consensus sequence (original motif): BDACCTWTAATTAWAHBWVVD Consensus sequence (reverse complement motif): DVVWVHTWTAATTAWAGGTDV Alignment: DVVWVHTWTAATTAWAGGTDV ----WHTATTATTTDH----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0602.1 Arid5a Original Motif Reverse Complement Backward 3 12 0.0290344 Taxon: Vertebrates Consensus sequence (original motif): VYAATATTGVDADH Consensus sequence (reverse complement motif): HDTDVCAATATTMV Alignment: HDTDVCAATATTMV HDAAATAATAHW-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0497.1 MEF2C Reverse Complement Reverse Complement Forward 2 12 0.0292377 Taxon: Vertebrates Consensus sequence (original motif): DDDCYAAAAATAGMH Consensus sequence (reverse complement motif): HYCTATTTTTMGHDD Alignment: HYCTATTTTTMGHDD -WHTATTATTTDH-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0346.1 NHP6B Reverse Complement Original Motif Backward 6 12 0.0302485 Taxon: Fungi Consensus sequence (original motif): HHTHHHWATATATWWWRDDV Consensus sequence (reverse complement motif): BHDKWWWATATATWHHHAHH Alignment: HHTHHHWATATATWWWRDDV ---WHTATTATTTDH----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 38 Motif name: cccGCCCCGCCCCsb Consensus sequence (original motif): BCCGCCCCGCCCCBB Consensus sequence (reverse complement motif): BBGGGGCGGGGCGGB ************************************************************************ Best Matches for Motif ID 38 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0685.1 SP4 Original Motif Original Motif Forward 1 15 0.0362597 Taxon: Vertebrates Consensus sequence (original motif): BWRGCCACGCCCMCTYH Consensus sequence (reverse complement motif): HMAGRGGGCGTGGCKWV Alignment: BWRGCCACGCCCMCTYH BCCGCCCCGCCCCBB-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0395.1 STP2 Reverse Complement Reverse Complement Forward 3 15 0.0578957 Taxon: Fungi Consensus sequence (original motif): HVVHBGGCGCCGYRYVHHBH Consensus sequence (reverse complement motif): HBDHVKKKCGGCGCCBHBVH Alignment: HBDHVKKKCGGCGCCBHBVH --BBGGGGCGGGGCGGB--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0697.1 ZIC3 Reverse Complement Reverse Complement Backward 1 15 0.065391 Taxon: Vertebrates Consensus sequence (original motif): GACCCCCCGCTGYGH Consensus sequence (reverse complement motif): DCKCAGCGGGGGGTC Alignment: DCKCAGCGGGGGGTC BBGGGGCGGGGCGGB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0516.1 SP2 Original Motif Original Motif Forward 1 15 0.0670527 Taxon: Vertebrates Consensus sequence (original motif): GYCCCGCCYCYBBBB Consensus sequence (reverse complement motif): BBBVKGKGGCGGGKC Alignment: GYCCCGCCYCYBBBB BCCGCCCCGCCCCBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0733.1 EGR4 Original Motif Original Motif Forward 2 15 0.0679848 Taxon: Vertebrates Consensus sequence (original motif): HHMCGCCCACGCAHHH Consensus sequence (reverse complement motif): HHHTGCGTGGGCGYHH Alignment: HHMCGCCCACGCAHHH -BCCGCCCCGCCCCBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 39 Motif name: kCAGCCAATmr Consensus sequence (original motif): DCAGCCAATVR Consensus sequence (reverse complement motif): MBATTGGCTGH ************************************************************************ Best Matches for Motif ID 39 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0502.1 NFYB Original Motif Original Motif Forward 4 11 0.0284319 Taxon: Vertebrates Consensus sequence (original motif): VHHYBRRCCAATCAG Consensus sequence (reverse complement motif): CTGATTGGKMBMHHB Alignment: VHHYBRRCCAATCAG ---DCAGCCAATVR- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0314.1 HAP3 Reverse Complement Original Motif Forward 3 11 0.0335999 Taxon: Fungi Consensus sequence (original motif): TCTSATTGGYYVRRA Consensus sequence (reverse complement motif): TMKVMMCCAATSAGA Alignment: TCTSATTGGYYVRRA --MBATTGGCTGH-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0060.2 NFYA Original Motif Reverse Complement Backward 8 11 0.050432 Taxon: Vertebrates Consensus sequence (original motif): AGVSYKCTGATTGGTBVR Consensus sequence (reverse complement motif): KVBACCAATCAGYMSBCT Alignment: KVBACCAATCAGYMSBCT DCAGCCAATVR------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA1090.1 WRKY60 Reverse Complement Reverse Complement Forward 1 11 0.0513607 Taxon: Plants Consensus sequence (original motif): VYGGTCAACBB Consensus sequence (reverse complement motif): DBGTTGACCKV Alignment: DBGTTGACCKV MBATTGGCTGH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0507.1 POU2F2 Original Motif Reverse Complement Backward 2 11 0.0574315 Taxon: Vertebrates Consensus sequence (original motif): HDHATTTGCATRT Consensus sequence (reverse complement motif): AKATGCAAATDDH Alignment: AKATGCAAATDDH -DCAGCCAATVR- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 40 Motif name: kcACCTGCAgc Consensus sequence (original motif): BCACCTGCABC Consensus sequence (reverse complement motif): GBTGCAGGTGB ************************************************************************ Best Matches for Motif ID 40 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0583.1 RAV1(var.2) Reverse Complement Reverse Complement Forward 1 11 0.0415014 Taxon: Plants Consensus sequence (original motif): HHCACCTGRVVH Consensus sequence (reverse complement motif): DVVKCAGGTGHH Alignment: DVVKCAGGTGHH GBTGCAGGTGB- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA1025.1 HBI1 Reverse Complement Original Motif Forward 1 11 0.0492589 Taxon: Plants Consensus sequence (original motif): BBBGCACGTGVB Consensus sequence (reverse complement motif): DVCACGTGCBBB Alignment: BBBGCACGTGVB GBTGCAGGTGB- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0646.1 GCM1 Original Motif Reverse Complement Forward 1 11 0.0498757 Taxon: Vertebrates Consensus sequence (original motif): BATGCGGGTAC Consensus sequence (reverse complement motif): GTACCCGCATB Alignment: GTACCCGCATB BCACCTGCABC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0744.1 SCRT2 Original Motif Reverse Complement Forward 1 11 0.0520474 Taxon: Vertebrates Consensus sequence (original motif): RWGCAACAGGTGB Consensus sequence (reverse complement motif): BCACCTGTTGCWK Alignment: RWGCAACAGGTGB BCACCTGCABC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0499.1 Myod1 Reverse Complement Reverse Complement Backward 2 11 0.0525308 Taxon: Vertebrates Consensus sequence (original motif): HVCAGCTGYYVBB Consensus sequence (reverse complement motif): VBVKMCAGCTGVH Alignment: VBVKMCAGCTGVH -GBTGCAGGTGB- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 41 Motif name: wwAAATAATAtw Consensus sequence (original motif): HDAAATAATADD Consensus sequence (reverse complement motif): DDTATTATTTDH ************************************************************************ Best Matches for Motif ID 41 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0345.1 NHP6A Original Motif Original Motif Backward 3 12 0.019792 Taxon: Fungi Consensus sequence (original motif): VHDHHYWHTATATAADDDHDH Consensus sequence (reverse complement motif): HHHDDDTTATATAHWKDHHHB Alignment: VHDHHYWHTATATAADDDHDH -------HDAAATAATADD-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0910.1 Hoxd8 Original Motif Original Motif Backward 3 12 0.0205534 Taxon: Vertebrates Consensus sequence (original motif): TAADTAATTAATRGHTH Consensus sequence (reverse complement motif): HADCMATTAATTADTTA Alignment: TAADTAATTAATRGHTH ---HDAAATAATADD-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0383.1 SMP1 Original Motif Original Motif Backward 5 12 0.0211647 Taxon: Fungi Consensus sequence (original motif): BDACCTWTAATTAWAHBWVVD Consensus sequence (reverse complement motif): DVVWVHTWTAATTAWAGGTDV Alignment: BDACCTWTAATTAWAHBWVVD -----HDAAATAATADD---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0346.1 NHP6B Reverse Complement Original Motif Forward 4 12 0.0213488 Taxon: Fungi Consensus sequence (original motif): HHTHHHWATATATWWWRDDV Consensus sequence (reverse complement motif): BHDKWWWATATATWHHHAHH Alignment: HHTHHHWATATATWWWRDDV ---DDTATTATTTDH----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0036.2 GATA2 Original Motif Reverse Complement Backward 3 12 0.0295683 Taxon: Vertebrates Consensus sequence (original motif): DDDTTCTTATCTSH Consensus sequence (reverse complement motif): HSAGATAAGAADHD Alignment: HSAGATAAGAADHD HDAAATAATADD-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 42 Motif name: sSGTCACGTGACSs Consensus sequence (original motif): SGGTCACGTGACCS Consensus sequence (reverse complement motif): SGGTCACGTGACCS ************************************************************************ Best Matches for Motif ID 42 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0551.1 HY5 Reverse Complement Reverse Complement Forward 2 14 0.0537567 Taxon: Plants Consensus sequence (original motif): DDTGMCACGTGKCAHH Consensus sequence (reverse complement motif): HHTGYCACGTGRCADD Alignment: HHTGYCACGTGRCADD -SGGTCACGTGACCS- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0638.1 CREB3 Reverse Complement Original Motif Backward 1 14 0.0605211 Taxon: Vertebrates Consensus sequence (original motif): VTGCCACGTCAYCV Consensus sequence (reverse complement motif): BGMTGACGTGGCAV Alignment: BGMTGACGTGGCAV SGGTCACGTGACCS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0550.1 BZR1 Reverse Complement Reverse Complement Forward 1 14 0.0613796 Taxon: Plants Consensus sequence (original motif): MVDMCACGTGDVHA Consensus sequence (reverse complement motif): TDVDCACGTGRHBY Alignment: TDVDCACGTGRHBY SGGTCACGTGACCS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0839.1 CREB3L1 Reverse Complement Original Motif Backward 1 14 0.067822 Taxon: Vertebrates Consensus sequence (original motif): VTGCCACGTCABCA Consensus sequence (reverse complement motif): TGVTGACGTGGCAB Alignment: VTGCCACGTCABCA SGGTCACGTGACCS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0376.1 RTG3 Original Motif Original Motif Forward 4 14 0.0699483 Taxon: Fungi Consensus sequence (original motif): VDVBDAGCACGTGCBBDVWH Consensus sequence (reverse complement motif): DWVDVVGCACGTGCTDVBDB Alignment: VDVBDAGCACGTGCBBDVWH ---SGGTCACGTGACCS--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 43 Motif name: wsTACwGTAsw Consensus sequence (original motif): HVTACWGTABD Consensus sequence (reverse complement motif): DBTACWGTAVH ************************************************************************ Best Matches for Motif ID 43 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0578.1 SPL8 Reverse Complement Reverse Complement Backward 6 11 0.0345287 Taxon: Plants Consensus sequence (original motif): WWDWHYGTACYWTWWW Consensus sequence (reverse complement motif): WWWAWKGTACMHWDWW Alignment: WWWAWKGTACMHWDWW DBTACWGTAVH----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0577.1 SPL3 Original Motif Reverse Complement Backward 1 11 0.0354348 Taxon: Plants Consensus sequence (original motif): DDWDMCGTACDWHHWH Consensus sequence (reverse complement motif): DWHHWDGTACGRHWDD Alignment: DDWDMCGTACDWHHWH -----HVTACWGTABD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0575.1 F3A4.140 Reverse Complement Reverse Complement Forward 1 11 0.0361196 Taxon: Plants Consensus sequence (original motif): VADBGACRGTTAS Consensus sequence (reverse complement motif): STAACKGTCVHTB Alignment: STAACKGTCVHTB DBTACWGTAVH-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0586.1 SPL14 Original Motif Original Motif Forward 3 11 0.0384428 Taxon: Plants Consensus sequence (original motif): BBBHBTCCGTACRDDDBBG Consensus sequence (reverse complement motif): CBBDHHKGTACGGABDBBV Alignment: BBBHBTCCGTACRDDDBBG --HVTACWGTABD------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0629.1 Rhox11 Reverse Complement Original Motif Backward 5 11 0.0388538 Taxon: Vertebrates Consensus sequence (original motif): AVDVCGCTGTWAWDVVW Consensus sequence (reverse complement motif): WVVHWTWACAGCGBHBT Alignment: AVDVCGCTGTWAWDVVW --DBTACWGTAVH---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 44 Motif name: dhACATTCTkh Consensus sequence (original motif): DHACATTCTGH Consensus sequence (reverse complement motif): HCAGAATGTHD ************************************************************************ Best Matches for Motif ID 44 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0113.3 NR3C1 Original Motif Reverse Complement Backward 5 11 0.0572458 Taxon: Vertebrates Consensus sequence (original motif): DRGWACAYDRTGTWCYH Consensus sequence (reverse complement motif): DKGWACAKDMTGTWCMH Alignment: DKGWACAKDMTGTWCMH --DHACATTCTGH---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0727.1 NR3C2 Original Motif Reverse Complement Backward 5 11 0.0612423 Taxon: Vertebrates Consensus sequence (original motif): DRGWACAYDRTGTWCYH Consensus sequence (reverse complement motif): DKGWACAKDKTGTWCMH Alignment: DKGWACAKDKTGTWCMH --DHACATTCTGH---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0948.1 ARR18 Reverse Complement Reverse Complement Backward 3 11 0.0662618 Taxon: Plants Consensus sequence (original motif): DBHDAGATACGVB Consensus sequence (reverse complement motif): DBCGTATCTDDDB Alignment: DBCGTATCTDDDB HCAGAATGTHD-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0770.1 HSF2 Reverse Complement Original Motif Forward 3 11 0.0734504 Taxon: Vertebrates Consensus sequence (original motif): TTCTAGAABDTTC Consensus sequence (reverse complement motif): GAAHBTTCTAGAA Alignment: TTCTAGAABDTTC --HCAGAATGTHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0088.2 ZNF143 Reverse Complement Original Motif Backward 3 11 0.0739185 Taxon: Vertebrates Consensus sequence (original motif): TWCCCAYAATGCAYYG Consensus sequence (reverse complement motif): CMMTGCATTKTGGGWA Alignment: TWCCCAYAATGCAYYG ---HCAGAATGTHD-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 45 Motif name: wbgTAAATAww Consensus sequence (original motif): DBGTAAATAHD Consensus sequence (reverse complement motif): DHTATTTACBD ************************************************************************ Best Matches for Motif ID 45 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0929.1 NCU00019 Original Motif Original Motif Forward 2 11 0 Taxon: Fungi Consensus sequence (original motif): DBDGTAAAYAHD Consensus sequence (reverse complement motif): BHTKTTTACDDB Alignment: DBDGTAAAYAHD -DBGTAAATAHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0851.1 Foxj3 Original Motif Original Motif Forward 4 11 0.0179286 Taxon: Vertebrates Consensus sequence (original motif): HDHADGTAAACAAAVVH Consensus sequence (reverse complement motif): DBVTTTGTTTACDTHDH Alignment: HDHADGTAAACAAAVVH ---DBGTAAATAHD--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0030.1 FOXF2 Original Motif Original Motif Forward 4 11 0.0182514 Taxon: Vertebrates Consensus sequence (original motif): BHADSGTAAACAAD Consensus sequence (reverse complement motif): DTTGTTTACSBTBB Alignment: BHADSGTAAACAAD ---DBGTAAATAHD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0928.1 zfh-2 Reverse Complement Reverse Complement Forward 1 11 0.0205307 Taxon: Nematodes Consensus sequence (original motif): DVTTAATTAGD Consensus sequence (reverse complement motif): DCTAATTAABB Alignment: DCTAATTAABB DHTATTTACBD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0621.1 mix-a Reverse Complement Reverse Complement Backward 1 11 0.0208203 Taxon: Vertebrates Consensus sequence (original motif): DDTTAATTADB Consensus sequence (reverse complement motif): DHTAATTAADB Alignment: DHTAATTAADB DHTATTTACBD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 46 Motif name: TFW1 Consensus sequence (original motif): GTCGCG Consensus sequence (reverse complement motif): CGCGAC ************************************************************************ Best Matches for Motif ID 46 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0749.1 ZBED1 Reverse Complement Original Motif Backward 4 6 0.0227251 Taxon: Vertebrates Consensus sequence (original motif): CTRTCGCGACATR Consensus sequence (reverse complement motif): KATGTCGCGAKAG Alignment: CTRTCGCGACATR ----CGCGAC--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0290.1 DAL81 Original Motif Original Motif Backward 10 6 0.0317132 Taxon: Fungi Consensus sequence (original motif): AAAAGCCGCGGGCGGGATT Consensus sequence (reverse complement motif): AATCCCGCCCGCGGCTTTT Alignment: AAAAGCCGCGGGCGGGATT ----GTCGCG--------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0449.1 h Original Motif Original Motif Forward 1 6 0.032877 Taxon: Insects Consensus sequence (original motif): GBCACGTGVC Consensus sequence (reverse complement motif): GVCACGTGBC Alignment: GBCACGTGVC GTCGCG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0374.1 RSC3 Original Motif Reverse Complement Forward 2 6 0.035812 Taxon: Fungi Consensus sequence (original motif): CGCGCVV Consensus sequence (reverse complement motif): VVGCGCG Alignment: VVGCGCG -GTCGCG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0527.1 ZBTB33 Original Motif Reverse Complement Forward 6 6 0.0365073 Taxon: Vertebrates Consensus sequence (original motif): BTCTCGCGAGABYTB Consensus sequence (reverse complement motif): BAKVTCTCGCGAGAB Alignment: BAKVTCTCGCGAGAB -----GTCGCG---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 47 Motif name: TFW2 Consensus sequence (original motif): SCGCGCGG Consensus sequence (reverse complement motif): CCGCGCGS ************************************************************************ Best Matches for Motif ID 47 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0290.1 DAL81 Reverse Complement Reverse Complement Forward 5 8 0.0420825 Taxon: Fungi Consensus sequence (original motif): AAAAGCCGCGGGCGGGATT Consensus sequence (reverse complement motif): AATCCCGCCCGCGGCTTTT Alignment: AATCCCGCCCGCGGCTTTT ----CCGCGCGS------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0733.1 EGR4 Original Motif Reverse Complement Backward 7 8 0.0451685 Taxon: Vertebrates Consensus sequence (original motif): HHMCGCCCACGCAHHH Consensus sequence (reverse complement motif): HHHTGCGTGGGCGYHH Alignment: HHHTGCGTGGGCGYHH --SCGCGCGG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0632.1 Tcfl5 Original Motif Original Motif Forward 2 8 0.0452807 Taxon: Vertebrates Consensus sequence (original motif): DBCDCGHGVH Consensus sequence (reverse complement motif): DVCHCGDGBH Alignment: DBCDCGHGVH -SCGCGCGG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0557.1 FHY3 Original Motif Reverse Complement Backward 4 8 0.0465452 Taxon: Plants Consensus sequence (original motif): HHCACGCGCTHD Consensus sequence (reverse complement motif): DDAGCGCGTGHD Alignment: DDAGCGCGTGHD -SCGCGCGG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0732.1 EGR3 Original Motif Reverse Complement Forward 2 8 0.0466662 Taxon: Vertebrates Consensus sequence (original motif): HHMCGCCCACGCAHH Consensus sequence (reverse complement motif): HDTGCGTGGGCGYHD Alignment: HDTGCGTGGGCGYHD -SCGCGCGG------ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 48 Motif name: TFW3 Consensus sequence (original motif): CGGCYBCGCG Consensus sequence (reverse complement motif): CGCGBMGCCG ************************************************************************ Best Matches for Motif ID 48 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0506.1 NRF1 Original Motif Original Motif Backward 1 10 0.051876 Taxon: Vertebrates Consensus sequence (original motif): GCGCVTGCGCR Consensus sequence (reverse complement motif): KGCGCAVGCGC Alignment: GCGCVTGCGCR -CGGCYBCGCG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0733.1 EGR4 Reverse Complement Reverse Complement Forward 4 10 0.0535154 Taxon: Vertebrates Consensus sequence (original motif): HHMCGCCCACGCAHHH Consensus sequence (reverse complement motif): HHHTGCGTGGGCGYHH Alignment: HHHTGCGTGGGCGYHH ---CGCGBMGCCG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0395.1 STP2 Original Motif Reverse Complement Backward 3 10 0.0546359 Taxon: Fungi Consensus sequence (original motif): HVVHBGGCGCCGYRYVHHBH Consensus sequence (reverse complement motif): HBDHVKKKCGGCGCCBHBVH Alignment: HBDHVKKKCGGCGCCBHBVH --------CGGCYBCGCG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0732.1 EGR3 Reverse Complement Reverse Complement Forward 3 10 0.0550164 Taxon: Vertebrates Consensus sequence (original motif): HHMCGCCCACGCAHH Consensus sequence (reverse complement motif): HDTGCGTGGGCGYHD Alignment: HDTGCGTGGGCGYHD --CGCGBMGCCG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0472.2 EGR2 Reverse Complement Reverse Complement Forward 1 10 0.0586338 Taxon: Vertebrates Consensus sequence (original motif): MCGCCCACGCA Consensus sequence (reverse complement motif): TGCGTGGGCGY Alignment: TGCGTGGGCGY CGCGBMGCCG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 49 Motif name: TFF1 Consensus sequence (original motif): CGGVGCCGCVGC Consensus sequence (reverse complement motif): GCVGCGGCBCCG ************************************************************************ Best Matches for Motif ID 49 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0535.1 Mad Original Motif Original Motif Backward 3 12 0.0401734 Taxon: Insects Consensus sequence (original motif): SHGRCGCCGVCGBHG Consensus sequence (reverse complement motif): CDBCGVCGGCGMCHS Alignment: SHGRCGCCGVCGBHG -CGGVGCCGCVGC-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0395.1 STP2 Original Motif Original Motif Forward 5 12 0.0423489 Taxon: Fungi Consensus sequence (original motif): HVVHBGGCGCCGYRYVHHBH Consensus sequence (reverse complement motif): HBDHVKKKCGGCGCCBHBVH Alignment: HVVHBGGCGCCGYRYVHHBH ----CGGVGCCGCVGC---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0162.2 EGR1 Reverse Complement Original Motif Forward 1 12 0.0505157 Taxon: Vertebrates Consensus sequence (original motif): BCBCCGCCCCCGCV Consensus sequence (reverse complement motif): VGCGGGGGCGGBGB Alignment: VGCGGGGGCGGBGB GCVGCGGCBCCG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0516.1 SP2 Reverse Complement Original Motif Backward 4 12 0.0608836 Taxon: Vertebrates Consensus sequence (original motif): GYCCCGCCYCYBBBB Consensus sequence (reverse complement motif): BBBVKGKGGCGGGKC Alignment: GYCCCGCCYCYBBBB GCVGCGGCBCCG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0685.1 SP4 Reverse Complement Original Motif Forward 4 12 0.0636458 Taxon: Vertebrates Consensus sequence (original motif): BWRGCCACGCCCMCTYH Consensus sequence (reverse complement motif): HMAGRGGGCGTGGCKWV Alignment: BWRGCCACGCCCMCTYH ---GCVGCGGCBCCG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 50 Motif name: TFF11 Consensus sequence (original motif): GGMGGRGGCGGVGC Consensus sequence (reverse complement motif): GCVCCGCCMCCYCC ************************************************************************ Best Matches for Motif ID 50 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0516.1 SP2 Reverse Complement Original Motif Forward 1 14 0.0189379 Taxon: Vertebrates Consensus sequence (original motif): GYCCCGCCYCYBBBB Consensus sequence (reverse complement motif): BBBVKGKGGCGGGKC Alignment: GYCCCGCCYCYBBBB GCVCCGCCMCCYCC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0162.2 EGR1 Original Motif Reverse Complement Backward 1 14 0.0228358 Taxon: Vertebrates Consensus sequence (original motif): BCBCCGCCCCCGCV Consensus sequence (reverse complement motif): VGCGGGGGCGGBGB Alignment: VGCGGGGGCGGBGB GGMGGRGGCGGVGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0528.1 ZNF263 Original Motif Original Motif Forward 7 14 0.0334396 Taxon: Vertebrates Consensus sequence (original motif): GGAGGAGGRRGRGGRGGRRGR Consensus sequence (reverse complement motif): KCMKCCKCCMCMKCCTCCTCC Alignment: GGAGGAGGRRGRGGRGGRRGR ------GGMGGRGGCGGVGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0685.1 SP4 Reverse Complement Original Motif Backward 1 14 0.0384468 Taxon: Vertebrates Consensus sequence (original motif): BWRGCCACGCCCMCTYH Consensus sequence (reverse complement motif): HMAGRGGGCGTGGCKWV Alignment: HMAGRGGGCGTGGCKWV ---GCVCCGCCMCCYCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0425.1 YGR067C Reverse Complement Original Motif Forward 1 14 0.0535495 Taxon: Fungi Consensus sequence (original motif): VCCCCDCHHHDDBD Consensus sequence (reverse complement motif): DBDDHHHGDGGGGB Alignment: DBDDHHHGDGGGGB GCVCCGCCMCCYCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 51 Motif name: TFM2 Consensus sequence (original motif): RGRGGAGRRGGHGGDG Consensus sequence (reverse complement motif): CHCCBCCKMCTCCKCM ************************************************************************ Best Matches for Motif ID 51 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0528.1 ZNF263 Original Motif Original Motif Backward 6 16 0.0285892 Taxon: Vertebrates Consensus sequence (original motif): GGAGGAGGRRGRGGRGGRRGR Consensus sequence (reverse complement motif): KCMKCCKCCMCMKCCTCCTCC Alignment: GGAGGAGGRRGRGGRGGRRGR RGRGGAGRRGGHGGDG----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0073.1 RREB1 Original Motif Reverse Complement Backward 1 16 0.0706134 Taxon: Vertebrates Consensus sequence (original motif): CCCCMAAMCAMCCMCMMMCV Consensus sequence (reverse complement motif): BGRRRGRGGRTGRTTYGGGG Alignment: CCCCMAAMCAMCCMCMMMCV ----RGRGGAGRRGGHGGDG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0395.1 STP2 Reverse Complement Reverse Complement Forward 3 16 0.0798169 Taxon: Fungi Consensus sequence (original motif): HVVHBGGCGCCGYRYVHHBH Consensus sequence (reverse complement motif): HBDHVKKKCGGCGCCBHBVH Alignment: HBDHVKKKCGGCGCCBHBVH --CHCCBCCKMCTCCKCM-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0303.1 GCN4 Reverse Complement Reverse Complement Forward 2 16 0.0799472 Taxon: Fungi Consensus sequence (original motif): BVHDDDRTGASTCAYHHHHVD Consensus sequence (reverse complement motif): DVHHDHMTGASTCAKHHHHBB Alignment: DVHHDHMTGASTCAKHHHHBB -CHCCBCCKMCTCCKCM---- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0351.1 DOT6 Original Motif Reverse Complement Backward 3 16 0.0800129 Taxon: Fungi Consensus sequence (original motif): DBBBDBWSCTCATCGCVHBBD Consensus sequence (reverse complement motif): DBBHBGCGATGAGSWBHVBVD Alignment: DBBHBGCGATGAGSWBHVBVD ---RGRGGAGRRGGHGGDG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 52 Motif name: TFM1 Consensus sequence (original motif): WTKTTTTTHWTTTTTTBT Consensus sequence (reverse complement motif): ABAAAAAAWHAAAAARAW ************************************************************************ Best Matches for Motif ID 52 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0554.1 SOC1 Original Motif Original Motif Backward 1 18 0.0131949 Taxon: Plants Consensus sequence (original motif): TTTYTYTTTYTYTYTYTTTYB Consensus sequence (reverse complement motif): VMAAAMAMAMAMAAAMAMAAA Alignment: TTTYTYTTTYTYTYTYTTTYB ---WTKTTTTTHWTTTTTTBT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0558.1 FLC Reverse Complement Original Motif Backward 1 18 0.0312707 Taxon: Plants Consensus sequence (original motif): DDWWDCCVAAAATRGAAAGWH Consensus sequence (reverse complement motif): HWCTTTCKATTTTBGGDWWBD Alignment: HWCTTTCKATTTTBGGDWWBD ---ABAAAAAAWHAAAAARAW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0555.1 SVP Reverse Complement Original Motif Forward 3 18 0.034968 Taxon: Plants Consensus sequence (original motif): VWWHCCAAAAADGGAAARAH Consensus sequence (reverse complement motif): HTMTTTCCDTTTTTGGHWWB Alignment: VWWHCCAAAAADGGAAARAH --ABAAAAAAWHAAAAARAW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0377.1 SFL1 Original Motif Reverse Complement Backward 4 18 0.0389299 Taxon: Fungi Consensus sequence (original motif): HHVHDHATMGAAGAAAHDWDW Consensus sequence (reverse complement motif): WDWDHTTTCTTCYATHHHVHH Alignment: WDWDHTTTCTTCYATHHHVHH WTKTTTTTHWTTTTTTBT--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0050.2 IRF1 Original Motif Original Motif Backward 3 18 0.0463762 Taxon: Vertebrates Consensus sequence (original motif): HBBYASTTTCACTTTCDBTTT Consensus sequence (reverse complement motif): AAABDGAAAGTGAAASTMVHH Alignment: HBBYASTTTCACTTTCDBTTT -WTKTTTTTHWTTTTTTBT-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 53 Motif name: TFM3 Consensus sequence (original motif): WWHTTTTTCABAAWTTWA Consensus sequence (reverse complement motif): TWAAWTTVTGAAAAAHWW ************************************************************************ Best Matches for Motif ID 53 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0533.1 su(Hw) Reverse Complement Original Motif Backward 1 18 0.0445095 Taxon: Insects Consensus sequence (original motif): GCCBAAAAGTATGCWAYRHWW Consensus sequence (reverse complement motif): WWHKKTWGCATACTTTTBGGC Alignment: GCCBAAAAGTATGCWAYRHWW ---TWAAWTTVTGAAAAAHWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0346.1 NHP6B Reverse Complement Original Motif Forward 3 18 0.0499298 Taxon: Fungi Consensus sequence (original motif): HHTHHHWATATATWWWRDDV Consensus sequence (reverse complement motif): BHDKWWWATATATWHHHAHH Alignment: HHTHHHWATATATWWWRDDV --TWAAWTTVTGAAAAAHWW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0345.1 NHP6A Reverse Complement Original Motif Forward 3 18 0.0526447 Taxon: Fungi Consensus sequence (original motif): VHDHHYWHTATATAADDDHDH Consensus sequence (reverse complement motif): HHHDDDTTATATAHWKDHHHB Alignment: VHDHHYWHTATATAADDDHDH --TWAAWTTVTGAAAAAHWW- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0377.1 SFL1 Original Motif Reverse Complement Forward 1 18 0.0568742 Taxon: Fungi Consensus sequence (original motif): HHVHDHATMGAAGAAAHDWDW Consensus sequence (reverse complement motif): WDWDHTTTCTTCYATHHHVHH Alignment: WDWDHTTTCTTCYATHHHVHH WWHTTTTTCABAAWTTWA--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0383.1 SMP1 Original Motif Reverse Complement Backward 1 18 0.0627549 Taxon: Fungi Consensus sequence (original motif): BDACCTWTAATTAWAHBWVVD Consensus sequence (reverse complement motif): DVVWVHTWTAATTAWAGGTDV Alignment: BDACCTWTAATTAWAHBWVVD ---WWHTTTTTCABAAWTTWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 54 Motif name: TFM12 Consensus sequence (original motif): CYYCBBCYYYTCCHCCTYYY Consensus sequence (reverse complement motif): KKKAGGDGGAKKMGBBGKMG ************************************************************************ Best Matches for Motif ID 54 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0554.1 SOC1 Original Motif Original Motif Backward 2 20 0.0600142 Taxon: Plants Consensus sequence (original motif): TTTYTYTTTYTYTYTYTTTYB Consensus sequence (reverse complement motif): VMAAAMAMAMAMAAAMAMAAA Alignment: TTTYTYTTTYTYTYTYTTTYB CYYCBBCYYYTCCHCCTYYY- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0278.1 BAS1 Reverse Complement Reverse Complement Forward 1 20 0.0673191 Taxon: Fungi Consensus sequence (original motif): BCWBRGCCVGAGTCARDWBVV Consensus sequence (reverse complement motif): BBBWHKTGACTCBGGCKBWGB Alignment: BBBWHKTGACTCBGGCKBWGB KKKAGGDGGAKKMGBBGKMG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0528.1 ZNF263 Original Motif Reverse Complement Forward 2 20 0.0677832 Taxon: Vertebrates Consensus sequence (original motif): GGAGGAGGRRGRGGRGGRRGR Consensus sequence (reverse complement motif): KCMKCCKCCMCMKCCTCCTCC Alignment: KCMKCCKCCMCMKCCTCCTCC -CYYCBBCYYYTCCHCCTYYY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0303.1 GCN4 Reverse Complement Original Motif Forward 1 20 0.0687871 Taxon: Fungi Consensus sequence (original motif): BVHDDDRTGASTCAYHHHHVD Consensus sequence (reverse complement motif): DVHHDHMTGASTCAKHHHHBB Alignment: DVHHDHMTGASTCAKHHHHBB KKKAGGDGGAKKMGBBGKMG- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0395.1 STP2 Original Motif Reverse Complement Forward 1 20 0.0689207 Taxon: Fungi Consensus sequence (original motif): HVVHBGGCGCCGYRYVHHBH Consensus sequence (reverse complement motif): HBDHVKKKCGGCGCCBHBVH Alignment: HVVHBGGCGCCGYRYVHHBH CYYCBBCYYYTCCHCCTYYY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 55 Motif name: TFM13 Consensus sequence (original motif): ATKAAWTTTTRMAABAHHTW Consensus sequence (reverse complement motif): WAHHTVTTYKAAAAWTTRAT ************************************************************************ Best Matches for Motif ID 55 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0345.1 NHP6A Reverse Complement Original Motif Forward 2 20 0.0523337 Taxon: Fungi Consensus sequence (original motif): VHDHHYWHTATATAADDDHDH Consensus sequence (reverse complement motif): HHHDDDTTATATAHWKDHHHB Alignment: VHDHHYWHTATATAADDDHDH -WAHHTVTTYKAAAAWTTRAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0377.1 SFL1 Reverse Complement Original Motif Backward 2 20 0.055887 Taxon: Fungi Consensus sequence (original motif): HHVHDHATMGAAGAAAHDWDW Consensus sequence (reverse complement motif): WDWDHTTTCTTCYATHHHVHH Alignment: HHVHDHATMGAAGAAAHDWDW WAHHTVTTYKAAAAWTTRAT- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0383.1 SMP1 Reverse Complement Original Motif Forward 2 20 0.0586889 Taxon: Fungi Consensus sequence (original motif): BDACCTWTAATTAWAHBWVVD Consensus sequence (reverse complement motif): DVVWVHTWTAATTAWAGGTDV Alignment: BDACCTWTAATTAWAHBWVVD -WAHHTVTTYKAAAAWTTRAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0390.1 STB3 Original Motif Original Motif Forward 2 20 0.0601237 Taxon: Fungi Consensus sequence (original motif): GBYHAAAWTTTTTCACTBHDD Consensus sequence (reverse complement motif): HHHBAGTGAAAAAWTTTDKVC Alignment: GBYHAAAWTTTTTCACTBHDD -ATKAAWTTTTRMAABAHHTW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0346.1 NHP6B Original Motif Reverse Complement Forward 1 20 0.0606785 Taxon: Fungi Consensus sequence (original motif): HHTHHHWATATATWWWRDDV Consensus sequence (reverse complement motif): BHDKWWWATATATWHHHAHH Alignment: HHTHHHWATATATWWWRDDV ATKAAWTTTTRMAABAHHTW ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 56 Motif name: TFM11 Consensus sequence (original motif): HDWVAAAHAAAAAMAAAMWWWHBWA Consensus sequence (reverse complement motif): TWVHWWWYTTTYTTTTTHTTTVWBH ************************************************************************ Best Matches for Motif ID 56 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0554.1 SOC1 Original Motif Reverse Complement Forward 3 21 0.036838 Taxon: Plants Consensus sequence (original motif): TTTYTYTTTYTYTYTYTTTYB Consensus sequence (reverse complement motif): VMAAAMAMAMAMAAAMAMAAA Alignment: TTTYTYTTTYTYTYTYTTTYB---- --HDWVAAAHAAAAAMAAAMWWWHBWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0377.1 SFL1 Original Motif Original Motif Backward 2 21 0.0547631 Taxon: Fungi Consensus sequence (original motif): HHVHDHATMGAAGAAAHDWDW Consensus sequence (reverse complement motif): WDWDHTTTCTTCYATHHHVHH Alignment: ----HHVHDHATMGAAGAAAHDWDW HDWVAAAHAAAAAMAAAMWWWHBWA- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0345.1 NHP6A Reverse Complement Reverse Complement Forward 2 21 0.0599871 Taxon: Fungi Consensus sequence (original motif): VHDHHYWHTATATAADDDHDH Consensus sequence (reverse complement motif): HHHDDDTTATATAHWKDHHHB Alignment: HHHDDDTTATATAHWKDHHHB---- -TWVHWWWYTTTYTTTTTHTTTVWBH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0336.1 MGA1 Original Motif Original Motif Forward 5 21 0.0605282 Taxon: Fungi Consensus sequence (original motif): DDVVHBATAGAACAYDHHDHV Consensus sequence (reverse complement motif): BHDHDDKTGTTCTATVDBVHD Alignment: DDVVHBATAGAACAYDHHDHV---- ----HDWVAAAHAAAAAMAAAMWWWHBWA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0050.2 IRF1 Reverse Complement Original Motif Forward 3 21 0.0637527 Taxon: Vertebrates Consensus sequence (original motif): HBBYASTTTCACTTTCDBTTT Consensus sequence (reverse complement motif): AAABDGAAAGTGAAASTMVHH Alignment: AAABDGAAAGTGAAASTMVHH---- --TWVHWWWYTTTYTTTTTHTTTVWBH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Results created by MOTIFSIM on 11-20-2023 13:57:01 Runtime: 167.424 seconds MOTIFSIM is written by Ngoc Tam L. Tran