MOTIFSIM - MOTIF SIMilarity Detection Tool

Version 2.2

INPUT

Input Parameters
Number of files: 2
Number of top significant motifs: 1
Number of best matches: 1
Similarity cutoff >= 0.75
Matching motif database: Jaspar Core
Motif tree: Yes
Combined similar motifs: Yes
Output file type: All
Output file format: All

Input files and motif counts
File name Count of motifs Dataset number
U20231121_R_11-21-23_1450_InsertFile1.txt 57 1
U20231121_R_11-21-23_1450_InsertFile2.txt 57 2

RESULTS

Top 1 Significant Motifs - Global Matching (Highest to Lowest)

Dataset #: 2 Motif ID: 72 Motif name: Motif 72

Original motif     Consensus sequence: CCATGGCAACVG Reverse complement motif     Consensus sequence: CVGTTGCCATGG

Best Matches for Top Significant Motif ID 72 (Highest to Lowest)

Dataset #: 1
Motif ID: 15
Motif name: Motif 15
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0

Alignment:
CCATGGCAACVG
CCATGGCAACVG

Original motif     Consensus sequence: CCATGGCAACVG Reverse complement motif     Consensus sequence: CVGTTGCCATGG



Significant Motifs - Global and Local Matching (Highest to Lowest)

Dataset #: 2 Motif ID: 72 Motif name: Motif 72

Original motif     Consensus sequence: CCATGGCAACVG Reverse complement motif     Consensus sequence: CVGTTGCCATGG

Best Matches for Significant Motif ID 72 (Highest to Lowest)

Dataset #: 1
Motif ID: 15
Motif name: Motif 15
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0

Alignment:
CCATGGCAACVG
CCATGGCAACVG

Original motif     Consensus sequence: CCATGGCAACVG Reverse complement motif     Consensus sequence: CVGTTGCCATGG



Best Matches for Each Motif (Highest to Lowest)

Dataset #: 1 Motif ID: 1 Motif name: Motif 1

Original motif     Consensus sequence: YYRRCCAATCAGAGV Reverse complement motif     Consensus sequence: VCTCTGATTGGKKKM

Best Matches for Motif ID 1 (Highest to Lowest)

Dataset #: 2
Motif ID: 58
Motif name: Motif 58
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 15
Similarity score: 0

Alignment:
YYRRCCAATCAGAGV
YYRRCCAATCAGAGV

Original motif     Consensus sequence: YYRRCCAATCAGAGV Reverse complement motif     Consensus sequence: VCTCTGATTGGKKKM


Dataset #: 2
Motif ID: 67
Motif name: Motif 67
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.595956

Alignment:
CATCTGCTTGGAGA-
VCTCTGATTGGKKKM

Original motif     Consensus sequence: CATCTGCTTGGAGA Reverse complement motif     Consensus sequence: TCTCCAAGCAGATG


Dataset #: 1 Motif ID: 2 Motif name: Motif 2

Original motif     Consensus sequence: RGGTCARAGGTCA Reverse complement motif     Consensus sequence: TGACCTKTGACCK

Best Matches for Motif ID 2 (Highest to Lowest)

Dataset #: 2
Motif ID: 59
Motif name: Motif 59
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 13
Similarity score: 0

Alignment:
RGGTCARAGGTCA
RGGTCARAGGTCA

Original motif     Consensus sequence: RGGTCARAGGTCA Reverse complement motif     Consensus sequence: TGACCTKTGACCK


Dataset #: 1 Motif ID: 3 Motif name: Motif 3

Original motif     Consensus sequence: HCAAVATGGCGGCBV Reverse complement motif     Consensus sequence: VBGCCGCCATVTTGD

Best Matches for Motif ID 3 (Highest to Lowest)

Dataset #: 2
Motif ID: 60
Motif name: Motif 60
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 15
Similarity score: 0

Alignment:
HCAAVATGGCGGCBV
HCAAVATGGCGGCBV

Original motif     Consensus sequence: HCAAVATGGCGGCBV Reverse complement motif     Consensus sequence: VBGCCGCCATVTTGD


Dataset #: 1 Motif ID: 4 Motif name: Motif 4

Original motif     Consensus sequence: BBRTGACGTCAYVV Reverse complement motif     Consensus sequence: VVMTGACGTCAKBB

Best Matches for Motif ID 4 (Highest to Lowest)

Dataset #: 2
Motif ID: 61
Motif name: Motif 61
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0

Alignment:
BBRTGACGTCAYVV
BBRTGACGTCAYVV

Original motif     Consensus sequence: BBRTGACGTCAYVV Reverse complement motif     Consensus sequence: VVMTGACGTCAKBB


Dataset #: 1 Motif ID: 5 Motif name: Motif 5

Original motif     Consensus sequence: CCCCTCCCCCY Reverse complement motif     Consensus sequence: KGGGGGAGGGG

Best Matches for Motif ID 5 (Highest to Lowest)

Dataset #: 2
Motif ID: 62
Motif name: Motif 62
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0

Alignment:
CCCCTCCCCCY
CCCCTCCCCCY

Original motif     Consensus sequence: CCCCTCCCCCY Reverse complement motif     Consensus sequence: KGGGGGAGGGG


Dataset #: 1 Motif ID: 6 Motif name: Motif 6

Original motif     Consensus sequence: ATTTGCATAWHA Reverse complement motif     Consensus sequence: TDWTATGCAAAT

Best Matches for Motif ID 6 (Highest to Lowest)

Dataset #: 2
Motif ID: 63
Motif name: Motif 63
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0

Alignment:
ATTTGCATAWHA
ATTTGCATAWHA

Original motif     Consensus sequence: ATTTGCATAWHA Reverse complement motif     Consensus sequence: TDWTATGCAAAT


Dataset #: 1 Motif ID: 7 Motif name: Motif 7

Original motif     Consensus sequence: GCATGMTGGGA Reverse complement motif     Consensus sequence: TCCCARCATGC

Best Matches for Motif ID 7 (Highest to Lowest)

Dataset #: 2
Motif ID: 64
Motif name: Motif 64
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0

Alignment:
GCATGMTGGGA
GCATGMTGGGA

Original motif     Consensus sequence: GCATGMTGGGA Reverse complement motif     Consensus sequence: TCCCARCATGC


Dataset #: 1 Motif ID: 8 Motif name: Motif 8

Original motif     Consensus sequence: GTCACGTGAC Reverse complement motif     Consensus sequence: GTCACGTGAC

Best Matches for Motif ID 8 (Highest to Lowest)

Dataset #: 2
Motif ID: 65
Motif name: Motif 65
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0

Alignment:
GTCACGTGAC
GTCACGTGAC

Original motif     Consensus sequence: GTCACGTGAC Reverse complement motif     Consensus sequence: GTCACGTGAC


Dataset #: 1 Motif ID: 9 Motif name: Motif 9

Original motif     Consensus sequence: CCGGAAGTRA Reverse complement motif     Consensus sequence: TMACTTCCGG

Best Matches for Motif ID 9 (Highest to Lowest)

Dataset #: 2
Motif ID: 66
Motif name: Motif 66
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0

Alignment:
CCGGAAGTRA
CCGGAAGTRA

Original motif     Consensus sequence: CCGGAAGTRA Reverse complement motif     Consensus sequence: TMACTTCCGG


Dataset #: 1 Motif ID: 10 Motif name: Motif 10

Original motif     Consensus sequence: CATCTGCTTGGAGA Reverse complement motif     Consensus sequence: TCTCCAAGCAGATG

Best Matches for Motif ID 10 (Highest to Lowest)

Dataset #: 2
Motif ID: 67
Motif name: Motif 67
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0

Alignment:
CATCTGCTTGGAGA
CATCTGCTTGGAGA

Original motif     Consensus sequence: CATCTGCTTGGAGA Reverse complement motif     Consensus sequence: TCTCCAAGCAGATG


Dataset #: 1 Motif ID: 11 Motif name: Motif 11

Original motif     Consensus sequence: AACAATRGV Reverse complement motif     Consensus sequence: VCKATTGTT

Best Matches for Motif ID 11 (Highest to Lowest)

Dataset #: 2
Motif ID: 68
Motif name: Motif 68
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 9
Similarity score: 0

Alignment:
AACAATRGV
AACAATRGV

Original motif     Consensus sequence: AACAATRGV Reverse complement motif     Consensus sequence: VCKATTGTT


Dataset #: 1 Motif ID: 12 Motif name: Motif 12

Original motif     Consensus sequence: CGCATGCGCASTVS Reverse complement motif     Consensus sequence: SVASTGCGCATGCG

Best Matches for Motif ID 12 (Highest to Lowest)

Dataset #: 2
Motif ID: 69
Motif name: Motif 69
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0

Alignment:
CGCATGCGCASTVS
CGCATGCGCASTVS

Original motif     Consensus sequence: CGCATGCGCASTVS Reverse complement motif     Consensus sequence: SVASTGCGCATGCG


Dataset #: 1 Motif ID: 13 Motif name: Motif 13

Original motif     Consensus sequence: RVTCTCGCGAGABY Reverse complement motif     Consensus sequence: MVTCTCGCGAGABK

Best Matches for Motif ID 13 (Highest to Lowest)

Dataset #: 2
Motif ID: 70
Motif name: Motif 70
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0

Alignment:
RVTCTCGCGAGABY
RVTCTCGCGAGABY

Original motif     Consensus sequence: RVTCTCGCGAGABY Reverse complement motif     Consensus sequence: MVTCTCGCGAGABK


Dataset #: 1 Motif ID: 14 Motif name: Motif 14

Original motif     Consensus sequence: AACAACAACA Reverse complement motif     Consensus sequence: TGTTGTTGTT

Best Matches for Motif ID 14 (Highest to Lowest)

Dataset #: 2
Motif ID: 71
Motif name: Motif 71
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0

Alignment:
AACAACAACA
AACAACAACA

Original motif     Consensus sequence: AACAACAACA Reverse complement motif     Consensus sequence: TGTTGTTGTT


Dataset #: 1 Motif ID: 15 Motif name: Motif 15

Original motif     Consensus sequence: CCATGGCAACVG Reverse complement motif     Consensus sequence: CVGTTGCCATGG

Best Matches for Motif ID 15 (Highest to Lowest)

Dataset #: 2
Motif ID: 72
Motif name: Motif 72
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0

Alignment:
CCATGGCAACVG
CCATGGCAACVG

Original motif     Consensus sequence: CCATGGCAACVG Reverse complement motif     Consensus sequence: CVGTTGCCATGG


Dataset #: 1 Motif ID: 16 Motif name: Motif 16

Original motif     Consensus sequence: TCCCGCCVW Reverse complement motif     Consensus sequence: WBGGCGGGA

Best Matches for Motif ID 16 (Highest to Lowest)

Dataset #: 2
Motif ID: 73
Motif name: Motif 73
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 9
Similarity score: 0

Alignment:
TCCCGCCVW
TCCCGCCVW

Original motif     Consensus sequence: TCCCGCCVW Reverse complement motif     Consensus sequence: WBGGCGGGA


Dataset #: 1 Motif ID: 17 Motif name: Motif 17

Original motif     Consensus sequence: AGGTGTGAAAWV Reverse complement motif     Consensus sequence: BWTTTCACACCT

Best Matches for Motif ID 17 (Highest to Lowest)

Dataset #: 2
Motif ID: 74
Motif name: Motif 74
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0

Alignment:
AGGTGTGAAAWV
AGGTGTGAAAWV

Original motif     Consensus sequence: AGGTGTGAAAWV Reverse complement motif     Consensus sequence: BWTTTCACACCT


Dataset #: 1 Motif ID: 18 Motif name: Motif 18

Original motif     Consensus sequence: GMTAATTA Reverse complement motif     Consensus sequence: TAATTAYC

Best Matches for Motif ID 18 (Highest to Lowest)

Dataset #: 2
Motif ID: 75
Motif name: Motif 75
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0

Alignment:
GMTAATTA
GMTAATTA

Original motif     Consensus sequence: GMTAATTA Reverse complement motif     Consensus sequence: TAATTAYC


Dataset #: 1 Motif ID: 19 Motif name: Motif 19

Original motif     Consensus sequence: CCAWATWTGG Reverse complement motif     Consensus sequence: CCAWATWTGG

Best Matches for Motif ID 19 (Highest to Lowest)

Dataset #: 2
Motif ID: 76
Motif name: Motif 76
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0

Alignment:
CCAWATWTGG
CCAWATWTGG

Original motif     Consensus sequence: CCAWATWTGG Reverse complement motif     Consensus sequence: CCAWATWTGG


Dataset #: 1 Motif ID: 20 Motif name: Motif 20

Original motif     Consensus sequence: DVTACWWGTABH Reverse complement motif     Consensus sequence: HBTACWWGTAVD

Best Matches for Motif ID 20 (Highest to Lowest)

Dataset #: 2
Motif ID: 77
Motif name: Motif 77
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0

Alignment:
DVTACWWGTABH
DVTACWWGTABH

Original motif     Consensus sequence: DVTACWWGTABH Reverse complement motif     Consensus sequence: HBTACWWGTAVD


Dataset #: 1 Motif ID: 21 Motif name: Motif 21

Original motif     Consensus sequence: GGCCACGCCC Reverse complement motif     Consensus sequence: GGGCGTGGCC

Best Matches for Motif ID 21 (Highest to Lowest)

Dataset #: 2
Motif ID: 78
Motif name: Motif 78
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0

Alignment:
GGCCACGCCC
GGCCACGCCC

Original motif     Consensus sequence: GGCCACGCCC Reverse complement motif     Consensus sequence: GGGCGTGGCC


Dataset #: 1 Motif ID: 22 Motif name: Motif 22

Original motif     Consensus sequence: ACCAAGGAGGTTA Reverse complement motif     Consensus sequence: TAACCTCCTTGGT

Best Matches for Motif ID 22 (Highest to Lowest)

Dataset #: 2
Motif ID: 79
Motif name: Motif 79
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 13
Similarity score: 0

Alignment:
ACCAAGGAGGTTA
ACCAAGGAGGTTA

Original motif     Consensus sequence: ACCAAGGAGGTTA Reverse complement motif     Consensus sequence: TAACCTCCTTGGT


Dataset #: 1 Motif ID: 23 Motif name: Motif 23

Original motif     Consensus sequence: CCCTCCCC Reverse complement motif     Consensus sequence: GGGGAGGG

Best Matches for Motif ID 23 (Highest to Lowest)

Dataset #: 2
Motif ID: 80
Motif name: Motif 80
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0

Alignment:
CCCTCCCC
CCCTCCCC

Original motif     Consensus sequence: CCCTCCCC Reverse complement motif     Consensus sequence: GGGGAGGG


Dataset #: 1 Motif ID: 24 Motif name: Motif 24

Original motif     Consensus sequence: TGGCGGGAAADH Reverse complement motif     Consensus sequence: HDTTTCCCGCCA

Best Matches for Motif ID 24 (Highest to Lowest)

Dataset #: 2
Motif ID: 81
Motif name: Motif 81
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0

Alignment:
TGGCGGGAAADH
TGGCGGGAAADH

Original motif     Consensus sequence: TGGCGGGAAADH Reverse complement motif     Consensus sequence: HDTTTCCCGCCA


Dataset #: 1 Motif ID: 25 Motif name: Motif 25

Original motif     Consensus sequence: CTCATGAATAWTYA Reverse complement motif     Consensus sequence: TMAWTATTCATGAG

Best Matches for Motif ID 25 (Highest to Lowest)

Dataset #: 2
Motif ID: 82
Motif name: Motif 82
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0

Alignment:
CTCATGAATAWTYA
CTCATGAATAWTYA

Original motif     Consensus sequence: CTCATGAATAWTYA Reverse complement motif     Consensus sequence: TMAWTATTCATGAG


Dataset #: 1 Motif ID: 26 Motif name: Motif 26

Original motif     Consensus sequence: CTGTCAATCAC Reverse complement motif     Consensus sequence: GTGATTGACAG

Best Matches for Motif ID 26 (Highest to Lowest)

Dataset #: 2
Motif ID: 83
Motif name: Motif 83
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0

Alignment:
CTGTCAATCAC
CTGTCAATCAC

Original motif     Consensus sequence: CTGTCAATCAC Reverse complement motif     Consensus sequence: GTGATTGACAG


Dataset #: 1 Motif ID: 27 Motif name: Motif 27

Original motif     Consensus sequence: CAGGTAAG Reverse complement motif     Consensus sequence: CTTACCTG

Best Matches for Motif ID 27 (Highest to Lowest)

Dataset #: 2
Motif ID: 84
Motif name: Motif 84
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0

Alignment:
CAGGTAAG
CAGGTAAG

Original motif     Consensus sequence: CAGGTAAG Reverse complement motif     Consensus sequence: CTTACCTG


Dataset #: 1 Motif ID: 28 Motif name: Motif 28

Original motif     Consensus sequence: AGCGCCVCCTR Reverse complement motif     Consensus sequence: KAGGVGGCGCT

Best Matches for Motif ID 28 (Highest to Lowest)

Dataset #: 2
Motif ID: 85
Motif name: Motif 85
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0

Alignment:
AGCGCCVCCTR
AGCGCCVCCTR

Original motif     Consensus sequence: AGCGCCVCCTR Reverse complement motif     Consensus sequence: KAGGVGGCGCT


Dataset #: 1 Motif ID: 29 Motif name: Motif 29

Original motif     Consensus sequence: CCTGGGAACGAGA Reverse complement motif     Consensus sequence: TCTCGTTCCCAGG

Best Matches for Motif ID 29 (Highest to Lowest)

Dataset #: 2
Motif ID: 86
Motif name: Motif 86
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 13
Similarity score: 0

Alignment:
CCTGGGAACGAGA
CCTGGGAACGAGA

Original motif     Consensus sequence: CCTGGGAACGAGA Reverse complement motif     Consensus sequence: TCTCGTTCCCAGG


Dataset #: 1 Motif ID: 30 Motif name: Motif 30

Original motif     Consensus sequence: RTGACGTASD Reverse complement motif     Consensus sequence: DSTACGTCAK

Best Matches for Motif ID 30 (Highest to Lowest)

Dataset #: 2
Motif ID: 87
Motif name: Motif 87
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0

Alignment:
RTGACGTASD
RTGACGTASD

Original motif     Consensus sequence: RTGACGTASD Reverse complement motif     Consensus sequence: DSTACGTCAK


Dataset #: 1 Motif ID: 31 Motif name: Motif 31

Original motif     Consensus sequence: CCCACAATGC Reverse complement motif     Consensus sequence: GCATTGTGGG

Best Matches for Motif ID 31 (Highest to Lowest)

Dataset #: 2
Motif ID: 88
Motif name: Motif 88
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0

Alignment:
CCCACAATGC
CCCACAATGC

Original motif     Consensus sequence: CCCACAATGC Reverse complement motif     Consensus sequence: GCATTGTGGG


Dataset #: 1 Motif ID: 32 Motif name: Motif 32

Original motif     Consensus sequence: AAACAAAACAA Reverse complement motif     Consensus sequence: TTGTTTTGTTT

Best Matches for Motif ID 32 (Highest to Lowest)

Dataset #: 2
Motif ID: 89
Motif name: Motif 89
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0

Alignment:
AAACAAAACAA
AAACAAAACAA

Original motif     Consensus sequence: AAACAAAACAA Reverse complement motif     Consensus sequence: TTGTTTTGTTT


Dataset #: 1 Motif ID: 33 Motif name: Motif 33

Original motif     Consensus sequence: AAGACAACA Reverse complement motif     Consensus sequence: TGTTGTCTT

Best Matches for Motif ID 33 (Highest to Lowest)

Dataset #: 2
Motif ID: 90
Motif name: Motif 90
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 9
Similarity score: 0

Alignment:
AAGACAACA
AAGACAACA

Original motif     Consensus sequence: AAGACAACA Reverse complement motif     Consensus sequence: TGTTGTCTT


Dataset #: 1 Motif ID: 34 Motif name: Motif 34

Original motif     Consensus sequence: ACATCCGGGDMMT Reverse complement motif     Consensus sequence: ARRDCCCGGATGT

Best Matches for Motif ID 34 (Highest to Lowest)

Dataset #: 2
Motif ID: 91
Motif name: Motif 91
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 13
Similarity score: 0

Alignment:
ACATCCGGGDMMT
ACATCCGGGDMMT

Original motif     Consensus sequence: ACATCCGGGDMMT Reverse complement motif     Consensus sequence: ARRDCCCGGATGT


Dataset #: 1 Motif ID: 35 Motif name: Motif 35

Original motif     Consensus sequence: AAAAYAAACAA Reverse complement motif     Consensus sequence: TTGTTTKTTTT

Best Matches for Motif ID 35 (Highest to Lowest)

Dataset #: 2
Motif ID: 92
Motif name: Motif 92
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0

Alignment:
AAAAYAAACAA
AAAAYAAACAA

Original motif     Consensus sequence: AAAAYAAACAA Reverse complement motif     Consensus sequence: TTGTTTKTTTT


Dataset #: 1 Motif ID: 36 Motif name: Motif 36

Original motif     Consensus sequence: AATACACATCY Reverse complement motif     Consensus sequence: MGATGTGTATT

Best Matches for Motif ID 36 (Highest to Lowest)

Dataset #: 2
Motif ID: 93
Motif name: Motif 93
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0

Alignment:
AATACACATCY
AATACACATCY

Original motif     Consensus sequence: AATACACATCY Reverse complement motif     Consensus sequence: MGATGTGTATT


Dataset #: 1 Motif ID: 37 Motif name: Motif 37

Original motif     Consensus sequence: AAGGTAAACA Reverse complement motif     Consensus sequence: TGTTTACCTT

Best Matches for Motif ID 37 (Highest to Lowest)

Dataset #: 2
Motif ID: 94
Motif name: Motif 94
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0

Alignment:
AAGGTAAACA
AAGGTAAACA

Original motif     Consensus sequence: AAGGTAAACA Reverse complement motif     Consensus sequence: TGTTTACCTT


Dataset #: 1 Motif ID: 38 Motif name: Motif 38

Original motif     Consensus sequence: CGCCGCCA Reverse complement motif     Consensus sequence: TGGCGGCG

Best Matches for Motif ID 38 (Highest to Lowest)

Dataset #: 2
Motif ID: 95
Motif name: Motif 95
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0

Alignment:
CGCCGCCA
CGCCGCCA

Original motif     Consensus sequence: CGCCGCCA Reverse complement motif     Consensus sequence: TGGCGGCG


Dataset #: 1 Motif ID: 39 Motif name: Motif 39

Original motif     Consensus sequence: GAAGAAGAA Reverse complement motif     Consensus sequence: TTCTTCTTC

Best Matches for Motif ID 39 (Highest to Lowest)

Dataset #: 2
Motif ID: 96
Motif name: Motif 96
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 9
Similarity score: 0

Alignment:
GAAGAAGAA
GAAGAAGAA

Original motif     Consensus sequence: GAAGAAGAA Reverse complement motif     Consensus sequence: TTCTTCTTC


Dataset #: 1 Motif ID: 40 Motif name: Motif 40

Original motif     Consensus sequence: GCCTGGTAGAGGCTA Reverse complement motif     Consensus sequence: TAGCCTCTACCAGGC

Best Matches for Motif ID 40 (Highest to Lowest)

Dataset #: 2
Motif ID: 97
Motif name: Motif 97
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 15
Similarity score: 0

Alignment:
GCCTGGTAGAGGCTA
GCCTGGTAGAGGCTA

Original motif     Consensus sequence: GCCTGGTAGAGGCTA Reverse complement motif     Consensus sequence: TAGCCTCTACCAGGC


Dataset #: 1 Motif ID: 41 Motif name: Motif 41

Original motif     Consensus sequence: AGACAATGTCGAG Reverse complement motif     Consensus sequence: CTCGACATTGTCT

Best Matches for Motif ID 41 (Highest to Lowest)

Dataset #: 2
Motif ID: 98
Motif name: Motif 98
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 13
Similarity score: 0

Alignment:
AGACAATGTCGAG
AGACAATGTCGAG

Original motif     Consensus sequence: AGACAATGTCGAG Reverse complement motif     Consensus sequence: CTCGACATTGTCT


Dataset #: 1 Motif ID: 42 Motif name: Motif 42

Original motif     Consensus sequence: TCACGTGACC Reverse complement motif     Consensus sequence: GGTCACGTGA

Best Matches for Motif ID 42 (Highest to Lowest)

Dataset #: 2
Motif ID: 99
Motif name: Motif 99
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0

Alignment:
TCACGTGACC
TCACGTGACC

Original motif     Consensus sequence: TCACGTGACC Reverse complement motif     Consensus sequence: GGTCACGTGA


Dataset #: 1 Motif ID: 43 Motif name: Motif 43

Original motif     Consensus sequence: GACAGAGGGTCAGAC Reverse complement motif     Consensus sequence: GTCTGACCCTCTGTC

Best Matches for Motif ID 43 (Highest to Lowest)

Dataset #: 2
Motif ID: 100
Motif name: Motif 100
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 15
Similarity score: 0

Alignment:
GACAGAGGGTCAGAC
GACAGAGGGTCAGAC

Original motif     Consensus sequence: GACAGAGGGTCAGAC Reverse complement motif     Consensus sequence: GTCTGACCCTCTGTC


Dataset #: 1 Motif ID: 44 Motif name: Motif 44

Original motif     Consensus sequence: GCTCCGCCC Reverse complement motif     Consensus sequence: GGGCGGAGC

Best Matches for Motif ID 44 (Highest to Lowest)

Dataset #: 2
Motif ID: 101
Motif name: Motif 101
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 9
Similarity score: 0

Alignment:
GCTCCGCCC
GCTCCGCCC

Original motif     Consensus sequence: GCTCCGCCC Reverse complement motif     Consensus sequence: GGGCGGAGC


Dataset #: 1 Motif ID: 45 Motif name: Motif 45

Original motif     Consensus sequence: CACACACACACAC Reverse complement motif     Consensus sequence: GTGTGTGTGTGTG

Best Matches for Motif ID 45 (Highest to Lowest)

Dataset #: 2
Motif ID: 102
Motif name: Motif 102
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 13
Similarity score: 0

Alignment:
CACACACACACAC
CACACACACACAC

Original motif     Consensus sequence: CACACACACACAC Reverse complement motif     Consensus sequence: GTGTGTGTGTGTG


Dataset #: 1 Motif ID: 46 Motif name: Motif 46

Original motif     Consensus sequence: ACGTCTYACATCG Reverse complement motif     Consensus sequence: CGATGTMAGACGT

Best Matches for Motif ID 46 (Highest to Lowest)

Dataset #: 2
Motif ID: 103
Motif name: Motif 103
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 13
Similarity score: 0

Alignment:
ACGTCTYACATCG
ACGTCTYACATCG

Original motif     Consensus sequence: ACGTCTYACATCG Reverse complement motif     Consensus sequence: CGATGTMAGACGT


Dataset #: 1 Motif ID: 47 Motif name: Motif 47

Original motif     Consensus sequence: AATAAGCTAGTT Reverse complement motif     Consensus sequence: AACTAGCTTATT

Best Matches for Motif ID 47 (Highest to Lowest)

Dataset #: 2
Motif ID: 104
Motif name: Motif 104
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0

Alignment:
AATAAGCTAGTT
AATAAGCTAGTT

Original motif     Consensus sequence: AATAAGCTAGTT Reverse complement motif     Consensus sequence: AACTAGCTTATT


Dataset #: 1 Motif ID: 48 Motif name: Motif 48

Original motif     Consensus sequence: CAGACRAC Reverse complement motif     Consensus sequence: GTKGTCTG

Best Matches for Motif ID 48 (Highest to Lowest)

Dataset #: 2
Motif ID: 105
Motif name: Motif 105
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0

Alignment:
CAGACRAC
CAGACRAC

Original motif     Consensus sequence: CAGACRAC Reverse complement motif     Consensus sequence: GTKGTCTG


Dataset #: 1 Motif ID: 49 Motif name: Motif 49

Original motif     Consensus sequence: ATGATGATGATGAYR Reverse complement motif     Consensus sequence: MMTCATCATCATCAT

Best Matches for Motif ID 49 (Highest to Lowest)

Dataset #: 2
Motif ID: 106
Motif name: Motif 106
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 15
Similarity score: 0

Alignment:
ATGATGATGATGAYR
ATGATGATGATGAYR

Original motif     Consensus sequence: ATGATGATGATGAYR Reverse complement motif     Consensus sequence: MMTCATCATCATCAT


Dataset #: 1 Motif ID: 50 Motif name: Motif 50

Original motif     Consensus sequence: ACAGGTGCA Reverse complement motif     Consensus sequence: TGCACCTGT

Best Matches for Motif ID 50 (Highest to Lowest)

Dataset #: 2
Motif ID: 107
Motif name: Motif 107
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 9
Similarity score: 0

Alignment:
ACAGGTGCA
ACAGGTGCA

Original motif     Consensus sequence: ACAGGTGCA Reverse complement motif     Consensus sequence: TGCACCTGT


Dataset #: 1 Motif ID: 51 Motif name: Motif 51

Original motif     Consensus sequence: GACCAATCA Reverse complement motif     Consensus sequence: TGATTGGTC

Best Matches for Motif ID 51 (Highest to Lowest)

Dataset #: 2
Motif ID: 108
Motif name: Motif 108
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 9
Similarity score: 0

Alignment:
GACCAATCA
GACCAATCA

Original motif     Consensus sequence: GACCAATCA Reverse complement motif     Consensus sequence: TGATTGGTC


Dataset #: 1 Motif ID: 52 Motif name: Motif 52

Original motif     Consensus sequence: AGCTGTTTTGG Reverse complement motif     Consensus sequence: CCAAAACAGCT

Best Matches for Motif ID 52 (Highest to Lowest)

Dataset #: 2
Motif ID: 109
Motif name: Motif 109
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0

Alignment:
AGCTGTTTTGG
AGCTGTTTTGG

Original motif     Consensus sequence: AGCTGTTTTGG Reverse complement motif     Consensus sequence: CCAAAACAGCT


Dataset #: 1 Motif ID: 53 Motif name: Motif 53

Original motif     Consensus sequence: CAGCCAATCA Reverse complement motif     Consensus sequence: TGATTGGCTG

Best Matches for Motif ID 53 (Highest to Lowest)

Dataset #: 2
Motif ID: 110
Motif name: Motif 110
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0

Alignment:
CAGCCAATCA
CAGCCAATCA

Original motif     Consensus sequence: CAGCCAATCA Reverse complement motif     Consensus sequence: TGATTGGCTG


Dataset #: 1 Motif ID: 54 Motif name: Motif 54

Original motif     Consensus sequence: ATGCAAAT Reverse complement motif     Consensus sequence: ATTTGCAT

Best Matches for Motif ID 54 (Highest to Lowest)

Dataset #: 2
Motif ID: 111
Motif name: Motif 111
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0

Alignment:
ATGCAAAT
ATGCAAAT

Original motif     Consensus sequence: ATGCAAAT Reverse complement motif     Consensus sequence: ATTTGCAT


Dataset #: 1 Motif ID: 55 Motif name: Motif 55

Original motif     Consensus sequence: ATAGTAGAAWTYGGC Reverse complement motif     Consensus sequence: GCCKAWTTCTACTAT

Best Matches for Motif ID 55 (Highest to Lowest)

Dataset #: 2
Motif ID: 112
Motif name: Motif 112
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 15
Similarity score: 0

Alignment:
ATAGTAGAAWTYGGC
ATAGTAGAAWTYGGC

Original motif     Consensus sequence: ATAGTAGAAWTYGGC Reverse complement motif     Consensus sequence: GCCKAWTTCTACTAT


Dataset #: 1 Motif ID: 56 Motif name: Motif 56

Original motif     Consensus sequence: HRCTGCAGYD Reverse complement motif     Consensus sequence: DMCTGCAGKH

Best Matches for Motif ID 56 (Highest to Lowest)

Dataset #: 2
Motif ID: 113
Motif name: Motif 113
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0

Alignment:
HRCTGCAGYD
HRCTGCAGYD

Original motif     Consensus sequence: HRCTGCAGYD Reverse complement motif     Consensus sequence: DMCTGCAGKH


Dataset #: 1 Motif ID: 57 Motif name: Motif 57

Original motif     Consensus sequence: ACTGTTTACAAGC Reverse complement motif     Consensus sequence: GCTTGTAAACAGT

Best Matches for Motif ID 57 (Highest to Lowest)

Dataset #: 2
Motif ID: 114
Motif name: Motif 114
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 13
Similarity score: 0

Alignment:
ACTGTTTACAAGC
ACTGTTTACAAGC

Original motif     Consensus sequence: ACTGTTTACAAGC Reverse complement motif     Consensus sequence: GCTTGTAAACAGT


Dataset #: 2 Motif ID: 58 Motif name: Motif 58

Original motif     Consensus sequence: YYRRCCAATCAGAGV Reverse complement motif     Consensus sequence: VCTCTGATTGGKKKM

Best Matches for Motif ID 58 (Highest to Lowest)

Dataset #: 1
Motif ID: 1
Motif name: Motif 1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 15
Similarity score: 0

Alignment:
YYRRCCAATCAGAGV
YYRRCCAATCAGAGV

Original motif     Consensus sequence: YYRRCCAATCAGAGV Reverse complement motif     Consensus sequence: VCTCTGATTGGKKKM


Dataset #: 2 Motif ID: 59 Motif name: Motif 59

Original motif     Consensus sequence: RGGTCARAGGTCA Reverse complement motif     Consensus sequence: TGACCTKTGACCK

Best Matches for Motif ID 59 (Highest to Lowest)

Dataset #: 1
Motif ID: 2
Motif name: Motif 2
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 13
Similarity score: 0

Alignment:
RGGTCARAGGTCA
RGGTCARAGGTCA

Original motif     Consensus sequence: RGGTCARAGGTCA Reverse complement motif     Consensus sequence: TGACCTKTGACCK


Dataset #: 2 Motif ID: 60 Motif name: Motif 60

Original motif     Consensus sequence: HCAAVATGGCGGCBV Reverse complement motif     Consensus sequence: VBGCCGCCATVTTGD

Best Matches for Motif ID 60 (Highest to Lowest)

Dataset #: 1
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 15
Similarity score: 0

Alignment:
HCAAVATGGCGGCBV
HCAAVATGGCGGCBV

Original motif     Consensus sequence: HCAAVATGGCGGCBV Reverse complement motif     Consensus sequence: VBGCCGCCATVTTGD


Dataset #: 2 Motif ID: 61 Motif name: Motif 61

Original motif     Consensus sequence: BBRTGACGTCAYVV Reverse complement motif     Consensus sequence: VVMTGACGTCAKBB

Best Matches for Motif ID 61 (Highest to Lowest)

Dataset #: 1
Motif ID: 4
Motif name: Motif 4
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0

Alignment:
BBRTGACGTCAYVV
BBRTGACGTCAYVV

Original motif     Consensus sequence: BBRTGACGTCAYVV Reverse complement motif     Consensus sequence: VVMTGACGTCAKBB


Dataset #: 2 Motif ID: 62 Motif name: Motif 62

Original motif     Consensus sequence: CCCCTCCCCCY Reverse complement motif     Consensus sequence: KGGGGGAGGGG

Best Matches for Motif ID 62 (Highest to Lowest)

Dataset #: 1
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0

Alignment:
CCCCTCCCCCY
CCCCTCCCCCY

Original motif     Consensus sequence: CCCCTCCCCCY Reverse complement motif     Consensus sequence: KGGGGGAGGGG


Dataset #: 2 Motif ID: 63 Motif name: Motif 63

Original motif     Consensus sequence: ATTTGCATAWHA Reverse complement motif     Consensus sequence: TDWTATGCAAAT

Best Matches for Motif ID 63 (Highest to Lowest)

Dataset #: 1
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0

Alignment:
ATTTGCATAWHA
ATTTGCATAWHA

Original motif     Consensus sequence: ATTTGCATAWHA Reverse complement motif     Consensus sequence: TDWTATGCAAAT


Dataset #: 2 Motif ID: 64 Motif name: Motif 64

Original motif     Consensus sequence: GCATGMTGGGA Reverse complement motif     Consensus sequence: TCCCARCATGC

Best Matches for Motif ID 64 (Highest to Lowest)

Dataset #: 1
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0

Alignment:
GCATGMTGGGA
GCATGMTGGGA

Original motif     Consensus sequence: GCATGMTGGGA Reverse complement motif     Consensus sequence: TCCCARCATGC


Dataset #: 2 Motif ID: 65 Motif name: Motif 65

Original motif     Consensus sequence: GTCACGTGAC Reverse complement motif     Consensus sequence: GTCACGTGAC

Best Matches for Motif ID 65 (Highest to Lowest)

Dataset #: 1
Motif ID: 8
Motif name: Motif 8
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0

Alignment:
GTCACGTGAC
GTCACGTGAC

Original motif     Consensus sequence: GTCACGTGAC Reverse complement motif     Consensus sequence: GTCACGTGAC


Dataset #: 2 Motif ID: 66 Motif name: Motif 66

Original motif     Consensus sequence: CCGGAAGTRA Reverse complement motif     Consensus sequence: TMACTTCCGG

Best Matches for Motif ID 66 (Highest to Lowest)

Dataset #: 1
Motif ID: 9
Motif name: Motif 9
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0

Alignment:
CCGGAAGTRA
CCGGAAGTRA

Original motif     Consensus sequence: CCGGAAGTRA Reverse complement motif     Consensus sequence: TMACTTCCGG


Dataset #: 2 Motif ID: 67 Motif name: Motif 67

Original motif     Consensus sequence: CATCTGCTTGGAGA Reverse complement motif     Consensus sequence: TCTCCAAGCAGATG

Best Matches for Motif ID 67 (Highest to Lowest)

Dataset #: 1
Motif ID: 10
Motif name: Motif 10
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0

Alignment:
CATCTGCTTGGAGA
CATCTGCTTGGAGA

Original motif     Consensus sequence: CATCTGCTTGGAGA Reverse complement motif     Consensus sequence: TCTCCAAGCAGATG


Dataset #: 2 Motif ID: 68 Motif name: Motif 68

Original motif     Consensus sequence: AACAATRGV Reverse complement motif     Consensus sequence: VCKATTGTT

Best Matches for Motif ID 68 (Highest to Lowest)

Dataset #: 1
Motif ID: 11
Motif name: Motif 11
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 9
Similarity score: 0

Alignment:
AACAATRGV
AACAATRGV

Original motif     Consensus sequence: AACAATRGV Reverse complement motif     Consensus sequence: VCKATTGTT


Dataset #: 2 Motif ID: 69 Motif name: Motif 69

Original motif     Consensus sequence: CGCATGCGCASTVS Reverse complement motif     Consensus sequence: SVASTGCGCATGCG

Best Matches for Motif ID 69 (Highest to Lowest)

Dataset #: 1
Motif ID: 12
Motif name: Motif 12
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0

Alignment:
CGCATGCGCASTVS
CGCATGCGCASTVS

Original motif     Consensus sequence: CGCATGCGCASTVS Reverse complement motif     Consensus sequence: SVASTGCGCATGCG


Dataset #: 2 Motif ID: 70 Motif name: Motif 70

Original motif     Consensus sequence: RVTCTCGCGAGABY Reverse complement motif     Consensus sequence: MVTCTCGCGAGABK

Best Matches for Motif ID 70 (Highest to Lowest)

Dataset #: 1
Motif ID: 13
Motif name: Motif 13
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0

Alignment:
RVTCTCGCGAGABY
RVTCTCGCGAGABY

Original motif     Consensus sequence: RVTCTCGCGAGABY Reverse complement motif     Consensus sequence: MVTCTCGCGAGABK


Dataset #: 2 Motif ID: 71 Motif name: Motif 71

Original motif     Consensus sequence: AACAACAACA Reverse complement motif     Consensus sequence: TGTTGTTGTT

Best Matches for Motif ID 71 (Highest to Lowest)

Dataset #: 1
Motif ID: 14
Motif name: Motif 14
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0

Alignment:
AACAACAACA
AACAACAACA

Original motif     Consensus sequence: AACAACAACA Reverse complement motif     Consensus sequence: TGTTGTTGTT


Dataset #: 2 Motif ID: 72 Motif name: Motif 72

Original motif     Consensus sequence: CCATGGCAACVG Reverse complement motif     Consensus sequence: CVGTTGCCATGG

Best Matches for Motif ID 72 (Highest to Lowest)

Dataset #: 1
Motif ID: 15
Motif name: Motif 15
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0

Alignment:
CCATGGCAACVG
CCATGGCAACVG

Original motif     Consensus sequence: CCATGGCAACVG Reverse complement motif     Consensus sequence: CVGTTGCCATGG


Dataset #: 2 Motif ID: 73 Motif name: Motif 73

Original motif     Consensus sequence: TCCCGCCVW Reverse complement motif     Consensus sequence: WBGGCGGGA

Best Matches for Motif ID 73 (Highest to Lowest)

Dataset #: 1
Motif ID: 16
Motif name: Motif 16
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 9
Similarity score: 0

Alignment:
TCCCGCCVW
TCCCGCCVW

Original motif     Consensus sequence: TCCCGCCVW Reverse complement motif     Consensus sequence: WBGGCGGGA


Dataset #: 2 Motif ID: 74 Motif name: Motif 74

Original motif     Consensus sequence: AGGTGTGAAAWV Reverse complement motif     Consensus sequence: BWTTTCACACCT

Best Matches for Motif ID 74 (Highest to Lowest)

Dataset #: 1
Motif ID: 17
Motif name: Motif 17
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0

Alignment:
AGGTGTGAAAWV
AGGTGTGAAAWV

Original motif     Consensus sequence: AGGTGTGAAAWV Reverse complement motif     Consensus sequence: BWTTTCACACCT


Dataset #: 2 Motif ID: 75 Motif name: Motif 75

Original motif     Consensus sequence: GMTAATTA Reverse complement motif     Consensus sequence: TAATTAYC

Best Matches for Motif ID 75 (Highest to Lowest)

Dataset #: 1
Motif ID: 18
Motif name: Motif 18
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0

Alignment:
GMTAATTA
GMTAATTA

Original motif     Consensus sequence: GMTAATTA Reverse complement motif     Consensus sequence: TAATTAYC


Dataset #: 2 Motif ID: 76 Motif name: Motif 76

Original motif     Consensus sequence: CCAWATWTGG Reverse complement motif     Consensus sequence: CCAWATWTGG

Best Matches for Motif ID 76 (Highest to Lowest)

Dataset #: 1
Motif ID: 19
Motif name: Motif 19
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0

Alignment:
CCAWATWTGG
CCAWATWTGG

Original motif     Consensus sequence: CCAWATWTGG Reverse complement motif     Consensus sequence: CCAWATWTGG


Dataset #: 2 Motif ID: 77 Motif name: Motif 77

Original motif     Consensus sequence: DVTACWWGTABH Reverse complement motif     Consensus sequence: HBTACWWGTAVD

Best Matches for Motif ID 77 (Highest to Lowest)

Dataset #: 1
Motif ID: 20
Motif name: Motif 20
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0

Alignment:
DVTACWWGTABH
DVTACWWGTABH

Original motif     Consensus sequence: DVTACWWGTABH Reverse complement motif     Consensus sequence: HBTACWWGTAVD


Dataset #: 2 Motif ID: 78 Motif name: Motif 78

Original motif     Consensus sequence: GGCCACGCCC Reverse complement motif     Consensus sequence: GGGCGTGGCC

Best Matches for Motif ID 78 (Highest to Lowest)

Dataset #: 1
Motif ID: 21
Motif name: Motif 21
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0

Alignment:
GGCCACGCCC
GGCCACGCCC

Original motif     Consensus sequence: GGCCACGCCC Reverse complement motif     Consensus sequence: GGGCGTGGCC


Dataset #: 2 Motif ID: 79 Motif name: Motif 79

Original motif     Consensus sequence: ACCAAGGAGGTTA Reverse complement motif     Consensus sequence: TAACCTCCTTGGT

Best Matches for Motif ID 79 (Highest to Lowest)

Dataset #: 1
Motif ID: 22
Motif name: Motif 22
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 13
Similarity score: 0

Alignment:
ACCAAGGAGGTTA
ACCAAGGAGGTTA

Original motif     Consensus sequence: ACCAAGGAGGTTA Reverse complement motif     Consensus sequence: TAACCTCCTTGGT


Dataset #: 2 Motif ID: 80 Motif name: Motif 80

Original motif     Consensus sequence: CCCTCCCC Reverse complement motif     Consensus sequence: GGGGAGGG

Best Matches for Motif ID 80 (Highest to Lowest)

Dataset #: 1
Motif ID: 23
Motif name: Motif 23
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0

Alignment:
CCCTCCCC
CCCTCCCC

Original motif     Consensus sequence: CCCTCCCC Reverse complement motif     Consensus sequence: GGGGAGGG


Dataset #: 2 Motif ID: 81 Motif name: Motif 81

Original motif     Consensus sequence: TGGCGGGAAADH Reverse complement motif     Consensus sequence: HDTTTCCCGCCA

Best Matches for Motif ID 81 (Highest to Lowest)

Dataset #: 1
Motif ID: 24
Motif name: Motif 24
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0

Alignment:
TGGCGGGAAADH
TGGCGGGAAADH

Original motif     Consensus sequence: TGGCGGGAAADH Reverse complement motif     Consensus sequence: HDTTTCCCGCCA


Dataset #: 2 Motif ID: 82 Motif name: Motif 82

Original motif     Consensus sequence: CTCATGAATAWTYA Reverse complement motif     Consensus sequence: TMAWTATTCATGAG

Best Matches for Motif ID 82 (Highest to Lowest)

Dataset #: 1
Motif ID: 25
Motif name: Motif 25
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0

Alignment:
CTCATGAATAWTYA
CTCATGAATAWTYA

Original motif     Consensus sequence: CTCATGAATAWTYA Reverse complement motif     Consensus sequence: TMAWTATTCATGAG


Dataset #: 2 Motif ID: 83 Motif name: Motif 83

Original motif     Consensus sequence: CTGTCAATCAC Reverse complement motif     Consensus sequence: GTGATTGACAG

Best Matches for Motif ID 83 (Highest to Lowest)

Dataset #: 1
Motif ID: 26
Motif name: Motif 26
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0

Alignment:
CTGTCAATCAC
CTGTCAATCAC

Original motif     Consensus sequence: CTGTCAATCAC Reverse complement motif     Consensus sequence: GTGATTGACAG


Dataset #: 2 Motif ID: 84 Motif name: Motif 84

Original motif     Consensus sequence: CAGGTAAG Reverse complement motif     Consensus sequence: CTTACCTG

Best Matches for Motif ID 84 (Highest to Lowest)

Dataset #: 1
Motif ID: 27
Motif name: Motif 27
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0

Alignment:
CAGGTAAG
CAGGTAAG

Original motif     Consensus sequence: CAGGTAAG Reverse complement motif     Consensus sequence: CTTACCTG


Dataset #: 2 Motif ID: 85 Motif name: Motif 85

Original motif     Consensus sequence: AGCGCCVCCTR Reverse complement motif     Consensus sequence: KAGGVGGCGCT

Best Matches for Motif ID 85 (Highest to Lowest)

Dataset #: 1
Motif ID: 28
Motif name: Motif 28
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0

Alignment:
AGCGCCVCCTR
AGCGCCVCCTR

Original motif     Consensus sequence: AGCGCCVCCTR Reverse complement motif     Consensus sequence: KAGGVGGCGCT


Dataset #: 2 Motif ID: 86 Motif name: Motif 86

Original motif     Consensus sequence: CCTGGGAACGAGA Reverse complement motif     Consensus sequence: TCTCGTTCCCAGG

Best Matches for Motif ID 86 (Highest to Lowest)

Dataset #: 1
Motif ID: 29
Motif name: Motif 29
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 13
Similarity score: 0

Alignment:
CCTGGGAACGAGA
CCTGGGAACGAGA

Original motif     Consensus sequence: CCTGGGAACGAGA Reverse complement motif     Consensus sequence: TCTCGTTCCCAGG


Dataset #: 2 Motif ID: 87 Motif name: Motif 87

Original motif     Consensus sequence: RTGACGTASD Reverse complement motif     Consensus sequence: DSTACGTCAK

Best Matches for Motif ID 87 (Highest to Lowest)

Dataset #: 1
Motif ID: 30
Motif name: Motif 30
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0

Alignment:
RTGACGTASD
RTGACGTASD

Original motif     Consensus sequence: RTGACGTASD Reverse complement motif     Consensus sequence: DSTACGTCAK


Dataset #: 2 Motif ID: 88 Motif name: Motif 88

Original motif     Consensus sequence: CCCACAATGC Reverse complement motif     Consensus sequence: GCATTGTGGG

Best Matches for Motif ID 88 (Highest to Lowest)

Dataset #: 1
Motif ID: 31
Motif name: Motif 31
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0

Alignment:
CCCACAATGC
CCCACAATGC

Original motif     Consensus sequence: CCCACAATGC Reverse complement motif     Consensus sequence: GCATTGTGGG


Dataset #: 2 Motif ID: 89 Motif name: Motif 89

Original motif     Consensus sequence: AAACAAAACAA Reverse complement motif     Consensus sequence: TTGTTTTGTTT

Best Matches for Motif ID 89 (Highest to Lowest)

Dataset #: 1
Motif ID: 32
Motif name: Motif 32
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0

Alignment:
AAACAAAACAA
AAACAAAACAA

Original motif     Consensus sequence: AAACAAAACAA Reverse complement motif     Consensus sequence: TTGTTTTGTTT


Dataset #: 2 Motif ID: 90 Motif name: Motif 90

Original motif     Consensus sequence: AAGACAACA Reverse complement motif     Consensus sequence: TGTTGTCTT

Best Matches for Motif ID 90 (Highest to Lowest)

Dataset #: 1
Motif ID: 33
Motif name: Motif 33
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 9
Similarity score: 0

Alignment:
AAGACAACA
AAGACAACA

Original motif     Consensus sequence: AAGACAACA Reverse complement motif     Consensus sequence: TGTTGTCTT


Dataset #: 2 Motif ID: 91 Motif name: Motif 91

Original motif     Consensus sequence: ACATCCGGGDMMT Reverse complement motif     Consensus sequence: ARRDCCCGGATGT

Best Matches for Motif ID 91 (Highest to Lowest)

Dataset #: 1
Motif ID: 34
Motif name: Motif 34
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 13
Similarity score: 0

Alignment:
ACATCCGGGDMMT
ACATCCGGGDMMT

Original motif     Consensus sequence: ACATCCGGGDMMT Reverse complement motif     Consensus sequence: ARRDCCCGGATGT


Dataset #: 2 Motif ID: 92 Motif name: Motif 92

Original motif     Consensus sequence: AAAAYAAACAA Reverse complement motif     Consensus sequence: TTGTTTKTTTT

Best Matches for Motif ID 92 (Highest to Lowest)

Dataset #: 1
Motif ID: 35
Motif name: Motif 35
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0

Alignment:
AAAAYAAACAA
AAAAYAAACAA

Original motif     Consensus sequence: AAAAYAAACAA Reverse complement motif     Consensus sequence: TTGTTTKTTTT


Dataset #: 2 Motif ID: 93 Motif name: Motif 93

Original motif     Consensus sequence: AATACACATCY Reverse complement motif     Consensus sequence: MGATGTGTATT

Best Matches for Motif ID 93 (Highest to Lowest)

Dataset #: 1
Motif ID: 36
Motif name: Motif 36
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0

Alignment:
AATACACATCY
AATACACATCY

Original motif     Consensus sequence: AATACACATCY Reverse complement motif     Consensus sequence: MGATGTGTATT


Dataset #: 2 Motif ID: 94 Motif name: Motif 94

Original motif     Consensus sequence: AAGGTAAACA Reverse complement motif     Consensus sequence: TGTTTACCTT

Best Matches for Motif ID 94 (Highest to Lowest)

Dataset #: 1
Motif ID: 37
Motif name: Motif 37
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0

Alignment:
AAGGTAAACA
AAGGTAAACA

Original motif     Consensus sequence: AAGGTAAACA Reverse complement motif     Consensus sequence: TGTTTACCTT


Dataset #: 2 Motif ID: 95 Motif name: Motif 95

Original motif     Consensus sequence: CGCCGCCA Reverse complement motif     Consensus sequence: TGGCGGCG

Best Matches for Motif ID 95 (Highest to Lowest)

Dataset #: 1
Motif ID: 38
Motif name: Motif 38
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0

Alignment:
CGCCGCCA
CGCCGCCA

Original motif     Consensus sequence: CGCCGCCA Reverse complement motif     Consensus sequence: TGGCGGCG


Dataset #: 2 Motif ID: 96 Motif name: Motif 96

Original motif     Consensus sequence: GAAGAAGAA Reverse complement motif     Consensus sequence: TTCTTCTTC

Best Matches for Motif ID 96 (Highest to Lowest)

Dataset #: 1
Motif ID: 39
Motif name: Motif 39
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 9
Similarity score: 0

Alignment:
GAAGAAGAA
GAAGAAGAA

Original motif     Consensus sequence: GAAGAAGAA Reverse complement motif     Consensus sequence: TTCTTCTTC


Dataset #: 2 Motif ID: 97 Motif name: Motif 97

Original motif     Consensus sequence: GCCTGGTAGAGGCTA Reverse complement motif     Consensus sequence: TAGCCTCTACCAGGC

Best Matches for Motif ID 97 (Highest to Lowest)

Dataset #: 1
Motif ID: 40
Motif name: Motif 40
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 15
Similarity score: 0

Alignment:
GCCTGGTAGAGGCTA
GCCTGGTAGAGGCTA

Original motif     Consensus sequence: GCCTGGTAGAGGCTA Reverse complement motif     Consensus sequence: TAGCCTCTACCAGGC


Dataset #: 2 Motif ID: 98 Motif name: Motif 98

Original motif     Consensus sequence: AGACAATGTCGAG Reverse complement motif     Consensus sequence: CTCGACATTGTCT

Best Matches for Motif ID 98 (Highest to Lowest)

Dataset #: 1
Motif ID: 41
Motif name: Motif 41
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 13
Similarity score: 0

Alignment:
AGACAATGTCGAG
AGACAATGTCGAG

Original motif     Consensus sequence: AGACAATGTCGAG Reverse complement motif     Consensus sequence: CTCGACATTGTCT


Dataset #: 2 Motif ID: 99 Motif name: Motif 99

Original motif     Consensus sequence: TCACGTGACC Reverse complement motif     Consensus sequence: GGTCACGTGA

Best Matches for Motif ID 99 (Highest to Lowest)

Dataset #: 1
Motif ID: 42
Motif name: Motif 42
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0

Alignment:
TCACGTGACC
TCACGTGACC

Original motif     Consensus sequence: TCACGTGACC Reverse complement motif     Consensus sequence: GGTCACGTGA


Dataset #: 2 Motif ID: 100 Motif name: Motif 100

Original motif     Consensus sequence: GACAGAGGGTCAGAC Reverse complement motif     Consensus sequence: GTCTGACCCTCTGTC

Best Matches for Motif ID 100 (Highest to Lowest)

Dataset #: 1
Motif ID: 43
Motif name: Motif 43
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 15
Similarity score: 0

Alignment:
GACAGAGGGTCAGAC
GACAGAGGGTCAGAC

Original motif     Consensus sequence: GACAGAGGGTCAGAC Reverse complement motif     Consensus sequence: GTCTGACCCTCTGTC


Dataset #: 2 Motif ID: 101 Motif name: Motif 101

Original motif     Consensus sequence: GCTCCGCCC Reverse complement motif     Consensus sequence: GGGCGGAGC

Best Matches for Motif ID 101 (Highest to Lowest)

Dataset #: 1
Motif ID: 44
Motif name: Motif 44
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 9
Similarity score: 0

Alignment:
GCTCCGCCC
GCTCCGCCC

Original motif     Consensus sequence: GCTCCGCCC Reverse complement motif     Consensus sequence: GGGCGGAGC


Dataset #: 2 Motif ID: 102 Motif name: Motif 102

Original motif     Consensus sequence: CACACACACACAC Reverse complement motif     Consensus sequence: GTGTGTGTGTGTG

Best Matches for Motif ID 102 (Highest to Lowest)

Dataset #: 1
Motif ID: 45
Motif name: Motif 45
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 13
Similarity score: 0

Alignment:
CACACACACACAC
CACACACACACAC

Original motif     Consensus sequence: CACACACACACAC Reverse complement motif     Consensus sequence: GTGTGTGTGTGTG


Dataset #: 2 Motif ID: 103 Motif name: Motif 103

Original motif     Consensus sequence: ACGTCTYACATCG Reverse complement motif     Consensus sequence: CGATGTMAGACGT

Best Matches for Motif ID 103 (Highest to Lowest)

Dataset #: 1
Motif ID: 46
Motif name: Motif 46
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 13
Similarity score: 0

Alignment:
ACGTCTYACATCG
ACGTCTYACATCG

Original motif     Consensus sequence: ACGTCTYACATCG Reverse complement motif     Consensus sequence: CGATGTMAGACGT


Dataset #: 2 Motif ID: 104 Motif name: Motif 104

Original motif     Consensus sequence: AATAAGCTAGTT Reverse complement motif     Consensus sequence: AACTAGCTTATT

Best Matches for Motif ID 104 (Highest to Lowest)

Dataset #: 1
Motif ID: 47
Motif name: Motif 47
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0

Alignment:
AATAAGCTAGTT
AATAAGCTAGTT

Original motif     Consensus sequence: AATAAGCTAGTT Reverse complement motif     Consensus sequence: AACTAGCTTATT


Dataset #: 2 Motif ID: 105 Motif name: Motif 105

Original motif     Consensus sequence: CAGACRAC Reverse complement motif     Consensus sequence: GTKGTCTG

Best Matches for Motif ID 105 (Highest to Lowest)

Dataset #: 1
Motif ID: 48
Motif name: Motif 48
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0

Alignment:
CAGACRAC
CAGACRAC

Original motif     Consensus sequence: CAGACRAC Reverse complement motif     Consensus sequence: GTKGTCTG


Dataset #: 2 Motif ID: 106 Motif name: Motif 106

Original motif     Consensus sequence: ATGATGATGATGAYR Reverse complement motif     Consensus sequence: MMTCATCATCATCAT

Best Matches for Motif ID 106 (Highest to Lowest)

Dataset #: 1
Motif ID: 49
Motif name: Motif 49
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 15
Similarity score: 0

Alignment:
ATGATGATGATGAYR
ATGATGATGATGAYR

Original motif     Consensus sequence: ATGATGATGATGAYR Reverse complement motif     Consensus sequence: MMTCATCATCATCAT


Dataset #: 2 Motif ID: 107 Motif name: Motif 107

Original motif     Consensus sequence: ACAGGTGCA Reverse complement motif     Consensus sequence: TGCACCTGT

Best Matches for Motif ID 107 (Highest to Lowest)

Dataset #: 1
Motif ID: 50
Motif name: Motif 50
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 9
Similarity score: 0

Alignment:
ACAGGTGCA
ACAGGTGCA

Original motif     Consensus sequence: ACAGGTGCA Reverse complement motif     Consensus sequence: TGCACCTGT


Dataset #: 2 Motif ID: 108 Motif name: Motif 108

Original motif     Consensus sequence: GACCAATCA Reverse complement motif     Consensus sequence: TGATTGGTC

Best Matches for Motif ID 108 (Highest to Lowest)

Dataset #: 1
Motif ID: 51
Motif name: Motif 51
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 9
Similarity score: 0

Alignment:
GACCAATCA
GACCAATCA

Original motif     Consensus sequence: GACCAATCA Reverse complement motif     Consensus sequence: TGATTGGTC


Dataset #: 2 Motif ID: 109 Motif name: Motif 109

Original motif     Consensus sequence: AGCTGTTTTGG Reverse complement motif     Consensus sequence: CCAAAACAGCT

Best Matches for Motif ID 109 (Highest to Lowest)

Dataset #: 1
Motif ID: 52
Motif name: Motif 52
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0

Alignment:
AGCTGTTTTGG
AGCTGTTTTGG

Original motif     Consensus sequence: AGCTGTTTTGG Reverse complement motif     Consensus sequence: CCAAAACAGCT


Dataset #: 2 Motif ID: 110 Motif name: Motif 110

Original motif     Consensus sequence: CAGCCAATCA Reverse complement motif     Consensus sequence: TGATTGGCTG

Best Matches for Motif ID 110 (Highest to Lowest)

Dataset #: 1
Motif ID: 53
Motif name: Motif 53
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0

Alignment:
CAGCCAATCA
CAGCCAATCA

Original motif     Consensus sequence: CAGCCAATCA Reverse complement motif     Consensus sequence: TGATTGGCTG


Dataset #: 2 Motif ID: 111 Motif name: Motif 111

Original motif     Consensus sequence: ATGCAAAT Reverse complement motif     Consensus sequence: ATTTGCAT

Best Matches for Motif ID 111 (Highest to Lowest)

Dataset #: 1
Motif ID: 54
Motif name: Motif 54
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0

Alignment:
ATGCAAAT
ATGCAAAT

Original motif     Consensus sequence: ATGCAAAT Reverse complement motif     Consensus sequence: ATTTGCAT


Dataset #: 2 Motif ID: 112 Motif name: Motif 112

Original motif     Consensus sequence: ATAGTAGAAWTYGGC Reverse complement motif     Consensus sequence: GCCKAWTTCTACTAT

Best Matches for Motif ID 112 (Highest to Lowest)

Dataset #: 1
Motif ID: 55
Motif name: Motif 55
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 15
Similarity score: 0

Alignment:
ATAGTAGAAWTYGGC
ATAGTAGAAWTYGGC

Original motif     Consensus sequence: ATAGTAGAAWTYGGC Reverse complement motif     Consensus sequence: GCCKAWTTCTACTAT


Dataset #: 2 Motif ID: 113 Motif name: Motif 113

Original motif     Consensus sequence: HRCTGCAGYD Reverse complement motif     Consensus sequence: DMCTGCAGKH

Best Matches for Motif ID 113 (Highest to Lowest)

Dataset #: 1
Motif ID: 56
Motif name: Motif 56
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0

Alignment:
HRCTGCAGYD
HRCTGCAGYD

Original motif     Consensus sequence: HRCTGCAGYD Reverse complement motif     Consensus sequence: DMCTGCAGKH


Dataset #: 2 Motif ID: 114 Motif name: Motif 114

Original motif     Consensus sequence: ACTGTTTACAAGC Reverse complement motif     Consensus sequence: GCTTGTAAACAGT

Best Matches for Motif ID 114 (Highest to Lowest)

Dataset #: 1
Motif ID: 57
Motif name: Motif 57
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 13
Similarity score: 0

Alignment:
ACTGTTTACAAGC
ACTGTTTACAAGC

Original motif     Consensus sequence: ACTGTTTACAAGC Reverse complement motif     Consensus sequence: GCTTGTAAACAGT


Results created by MOTIFSIM on 11-21-2023 16:21:43
Runtime: 3497.06 seconds

MOTIFSIM is written by Ngoc Tam L. Tran
Motif logo generated by weblogo