**************************************************************************************************************************************************************************************************** MOTIFSIM - Motif Similarity Detection Tool Version 2.2 **************************************************************************************************************************************************************************************************** INPUT **************************************************************************************************************************************************************************************************** Input Parameters Number of files: 2 Number of top significant motifs: 1 Number of best matches: 1 Similarity cutoff: >= 0.75 Matching motif database: Jaspar Core Motif tree: Yes Combined similar motifs: Yes Output file type: All Output file format: All Input files and motif counts File name Count of motifs Dataset # U20231121_R_11-21-23_1450_InsertFile1.txt 57 1 U20231121_R_11-21-23_1450_InsertFile2.txt 57 2 **************************************************************************************************************************************************************************************************** RESULTS **************************************************************************************************************************************************************************************************** ****************************************************************** Top 1 Significant Motifs - Global Matching (Highest to Lowest) ****************************************************************** Dataset #: 2 Motif ID: 72 Motif name: Motif 72 Original motif 0.000074 0.850641 0.014976 0.134309 0.000074 0.995643 0.000071 0.004212 0.852861 0.122145 0.006935 0.018059 0.019000 0.051316 0.000071 0.929613 0.208673 0.000071 0.791182 0.000074 0.020178 0.000071 0.979677 0.000074 0.020980 0.751451 0.006102 0.221467 0.665656 0.000071 0.260192 0.074081 0.997774 0.000071 0.002081 0.000074 0.000074 0.999781 0.000071 0.000074 0.252834 0.320671 0.376279 0.050216 0.185062 0.123658 0.635099 0.056181 Consensus sequence: CCATGGCAACVG Reverse complement motif 0.185062 0.635099 0.123658 0.056181 0.252834 0.376279 0.320671 0.050216 0.000074 0.000071 0.999781 0.000074 0.000074 0.000071 0.002081 0.997774 0.074081 0.000071 0.260192 0.665656 0.020980 0.006102 0.751451 0.221467 0.020178 0.979677 0.000071 0.000074 0.208673 0.791182 0.000071 0.000074 0.929613 0.051316 0.000071 0.019000 0.018059 0.122145 0.006935 0.852861 0.000074 0.000071 0.995643 0.004212 0.000074 0.014976 0.850641 0.134309 Consensus sequence: CVGTTGCCATGG *************************************************************** Best Matches for Top Significant Motif ID 72 (Highest to Lowest) *************************************************************** Dataset # Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score 1 15 Motif 15 Original Motif Original Motif Backward 1 12 0.000000 Original motif 0.000074 0.850641 0.014976 0.134309 0.000074 0.995643 0.000071 0.004212 0.852861 0.122145 0.006935 0.018059 0.019000 0.051316 0.000071 0.929613 0.208673 0.000071 0.791182 0.000074 0.020178 0.000071 0.979677 0.000074 0.020980 0.751451 0.006102 0.221467 0.665656 0.000071 0.260192 0.074081 0.997774 0.000071 0.002081 0.000074 0.000074 0.999781 0.000071 0.000074 0.252834 0.320671 0.376279 0.050216 0.185062 0.123658 0.635099 0.056181 Consensus sequence: CCATGGCAACVG Reverse complement motif 0.185062 0.635099 0.123658 0.056181 0.252834 0.376279 0.320671 0.050216 0.000074 0.000071 0.999781 0.000074 0.000074 0.000071 0.002081 0.997774 0.074081 0.000071 0.260192 0.665656 0.020980 0.006102 0.751451 0.221467 0.020178 0.979677 0.000071 0.000074 0.208673 0.791182 0.000071 0.000074 0.929613 0.051316 0.000071 0.019000 0.018059 0.122145 0.006935 0.852861 0.000074 0.000071 0.995643 0.004212 0.000074 0.014976 0.850641 0.134309 Consensus sequence: CVGTTGCCATGG Alignment: CCATGGCAACVG CCATGGCAACVG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Results created by MOTIFSIM on 11-21-2023 16:21:43 Runtime: 3497.056160 seconds MOTIFSIM is written by Ngoc Tam L. Tran