MOTIFSIM - MOTIF SIMilarity Detection Tool

Input Parameters

Number of files:	4
Number of top significant motifs:	1
Number of best matches:	1
Similarity cutoff >=	0.5
Matching motif database:	Jaspar Core
Motif tree:	Yes
Combined similar motifs:	No
Output file type:	All
Output file format:	All

Input files and motif counts

File name	Count of motifs	Dataset number
U20231121_R_11-21-23_5786_InsertFile1.txt	68	1
U20231121_R_11-21-23_5786_InsertFile2.txt	45	2
U20231121_R_11-21-23_5786_InsertFile3.txt	57	3
U20231121_R_11-21-23_5786_InsertFile4.txt	57	4

Top 1 Significant Motifs - Global Matching (Highest to Lowest)

Dataset #: 1

Motif ID: 2

Motif name: Motif 2

Original motif     Consensus sequence: CARCCAATCAGA	Reverse complement motif     Consensus sequence: TCTGATTGGMTG

Best Matches for Top Significant Motif ID 2 (Highest to Lowest)

Dataset #:	3
Motif ID:	114
Motif name:	Motif 114
Matching format of first motif:	Original Motif
Matching format of second motif:	Original Motif
Direction:	Forward
Position number:	2
Number of overlap:	12
Similarity score:	0

Alignment:
YYRRCCAATCAGAGV
-CARCCAATCAGA--

Original motif     Consensus sequence: YYRRCCAATCAGAGV	Reverse complement motif     Consensus sequence: VCTCTGATTGGKKKM

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