MOTIFSIM - MOTIF SIMilarity Detection Tool

Version 2.2

INPUT

Input Parameters
Number of files: 4
Number of top significant motifs: 1
Number of best matches: 1
Similarity cutoff >= 0.5
Matching motif database: Jaspar Core
Motif tree: Yes
Combined similar motifs: No
Output file type: All
Output file format: All

Input files and motif counts
File name Count of motifs Dataset number
U20231121_R_11-21-23_5786_InsertFile1.txt 68 1
U20231121_R_11-21-23_5786_InsertFile2.txt 45 2
U20231121_R_11-21-23_5786_InsertFile3.txt 57 3
U20231121_R_11-21-23_5786_InsertFile4.txt 57 4

RESULTS

Top 1 Significant Motifs - Global Matching (Highest to Lowest)

Dataset #: 1 Motif ID: 2 Motif name: Motif 2

Original motif     Consensus sequence: CARCCAATCAGA Reverse complement motif     Consensus sequence: TCTGATTGGMTG

Best Matches for Top Significant Motif ID 2 (Highest to Lowest)

Dataset #: 3
Motif ID: 114
Motif name: Motif 114
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 12
Similarity score: 0

Alignment:
YYRRCCAATCAGAGV
-CARCCAATCAGA--

Original motif     Consensus sequence: YYRRCCAATCAGAGV Reverse complement motif     Consensus sequence: VCTCTGATTGGKKKM



Significant Motifs - Global and Local Matching (Highest to Lowest)

Dataset #: 1 Motif ID: 2 Motif name: Motif 2

Original motif     Consensus sequence: CARCCAATCAGA Reverse complement motif     Consensus sequence: TCTGATTGGMTG

Best Matches for Significant Motif ID 2 (Highest to Lowest)

Dataset #: 3
Motif ID: 114
Motif name: Motif 114
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 12
Similarity score: 0

Alignment:
YYRRCCAATCAGAGV
-CARCCAATCAGA--

Original motif     Consensus sequence: YYRRCCAATCAGAGV Reverse complement motif     Consensus sequence: VCTCTGATTGGKKKM



Best Matches for Each Motif (Highest to Lowest)

Dataset #: 1 Motif ID: 1 Motif name: Motif 1

Original motif     Consensus sequence: ACACACACACACAC Reverse complement motif     Consensus sequence: GTGTGTGTGTGTGT

Best Matches for Motif ID 1 (Highest to Lowest)

Dataset #: 1
Motif ID: 63
Motif name: Motif 63
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0544288

Alignment:
AAACACCCATACAC
ACACACACACACAC

Original motif     Consensus sequence: AAACACCCATACAC Reverse complement motif     Consensus sequence: GTGTATGGGTGTTT


Dataset #: 2
Motif ID: 105
Motif name: Motif 105
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 14
Similarity score: 0.0816901

Alignment:
AAGGACACATACGCC
ACACACACACACAC-

Original motif     Consensus sequence: AAGGACACATACGCC Reverse complement motif     Consensus sequence: GGCGTATGTGTCCTT


Dataset #: 1 Motif ID: 2 Motif name: Motif 2

Original motif     Consensus sequence: CARCCAATCAGA Reverse complement motif     Consensus sequence: TCTGATTGGMTG

Best Matches for Motif ID 2 (Highest to Lowest)

Dataset #: 3
Motif ID: 114
Motif name: Motif 114
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 12
Similarity score: 0

Alignment:
YYRRCCAATCAGAGV
-CARCCAATCAGA--

Original motif     Consensus sequence: YYRRCCAATCAGAGV Reverse complement motif     Consensus sequence: VCTCTGATTGGKKKM


Dataset #: 1 Motif ID: 3 Motif name: Motif 3

Original motif     Consensus sequence: CCASCAGRGGGCR Reverse complement motif     Consensus sequence: MGCCCKCTGSTGG

Best Matches for Motif ID 3 (Highest to Lowest)

Dataset #: 1
Motif ID: 53
Motif name: Motif 53
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 13
Similarity score: 0.0665332

Alignment:
ACAGACCRCAGGTTG
--MGCCCKCTGSTGG

Original motif     Consensus sequence: ACAGACCRCAGGTTG Reverse complement motif     Consensus sequence: CAACCTGKGGTCTGT


Dataset #: 1 Motif ID: 4 Motif name: Motif 4

Original motif     Consensus sequence: AGGRGGAGGRG Reverse complement motif     Consensus sequence: CKCCTCCKCCT

Best Matches for Motif ID 4 (Highest to Lowest)

Dataset #: 3
Motif ID: 118
Motif name: Motif 118
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0387788

Alignment:
KGGGGGAGGGG
AGGRGGAGGRG

Original motif     Consensus sequence: CCCCTCCCCCY Reverse complement motif     Consensus sequence: KGGGGGAGGGG


Dataset #: 1 Motif ID: 5 Motif name: Motif 5

Original motif     Consensus sequence: AGAGAGAGAGAGAGA Reverse complement motif     Consensus sequence: TCTCTCTCTCTCTCT

Best Matches for Motif ID 5 (Highest to Lowest)

Dataset #: 4
Motif ID: 174
Motif name: Motif 174
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 15
Similarity score: 0.0914884

Alignment:
GAAGAARAARAARAA
AGAGAGAGAGAGAGA

Original motif     Consensus sequence: GAAGAARAARAARAA Reverse complement motif     Consensus sequence: TTMTTKTTMTTCTTC


Dataset #: 1 Motif ID: 6 Motif name: Motif 6

Original motif     Consensus sequence: ATGCWAATGA Reverse complement motif     Consensus sequence: TCATTWGCAT

Best Matches for Motif ID 6 (Highest to Lowest)

Dataset #: 4
Motif ID: 190
Motif name: Motif 190
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 10
Similarity score: 0.0315412

Alignment:
SGCATTGGCATTG
-TCATTWGCAT--

Original motif     Consensus sequence: CAATGCCAATGCS Reverse complement motif     Consensus sequence: SGCATTGGCATTG


Dataset #: 1 Motif ID: 7 Motif name: Motif 7

Original motif     Consensus sequence: CCTCCATCH Reverse complement motif     Consensus sequence: HGATGGAGG

Best Matches for Motif ID 7 (Highest to Lowest)

Dataset #: 4
Motif ID: 216
Motif name: Motif 216
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 9
Similarity score: 0.0497351

Alignment:
CTTTGCTGGAGTG
---HGATGGAGG-

Original motif     Consensus sequence: CACTCCAGCAAAG Reverse complement motif     Consensus sequence: CTTTGCTGGAGTG


Dataset #: 1 Motif ID: 8 Motif name: Motif 8

Original motif     Consensus sequence: TAAATAAA Reverse complement motif     Consensus sequence: TTTATTTA

Best Matches for Motif ID 8 (Highest to Lowest)

Dataset #: 4
Motif ID: 184
Motif name: Motif 184
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0349328

Alignment:
GTAAACAAA
-TAAATAAA

Original motif     Consensus sequence: GTAAACAAA Reverse complement motif     Consensus sequence: TTTGTTTAC


Dataset #: 1 Motif ID: 9 Motif name: Motif 9

Original motif     Consensus sequence: CTAACACCACTTC Reverse complement motif     Consensus sequence: GAAGTGGTGTTAG

Best Matches for Motif ID 9 (Highest to Lowest)

Dataset #: 1
Motif ID: 21
Motif name: Motif 21
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 13
Similarity score: 0.0571817

Alignment:
CAAACTCCACACAGA
CTAACACCACTTC--

Original motif     Consensus sequence: CAAACTCCACACAGA Reverse complement motif     Consensus sequence: TCTGTGTGGAGTTTG


Dataset #: 1 Motif ID: 10 Motif name: Motif 10

Original motif     Consensus sequence: RTGACGTCAY Reverse complement motif     Consensus sequence: KTGACGTCAM

Best Matches for Motif ID 10 (Highest to Lowest)

Dataset #: 3
Motif ID: 117
Motif name: Motif 117
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 10
Similarity score: 0

Alignment:
BBRTGACGTCAYVV
--RTGACGTCAY--

Original motif     Consensus sequence: BBRTGACGTCAYVV Reverse complement motif     Consensus sequence: VVMTGACGTCAKBB


Dataset #: 1 Motif ID: 11 Motif name: Motif 11

Original motif     Consensus sequence: GCTGGTTCGAGYC Reverse complement motif     Consensus sequence: GKCTCGAACCAGC

Best Matches for Motif ID 11 (Highest to Lowest)

Dataset #: 2
Motif ID: 93
Motif name: Motif 93
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 13
Similarity score: 0.0600551

Alignment:
AGCTGGCACGAGGTG
-GCTGGTTCGAGYC-

Original motif     Consensus sequence: AGCTGGCACGAGGTG Reverse complement motif     Consensus sequence: CACCTCGTGCCAGCT


Dataset #: 1 Motif ID: 12 Motif name: Motif 12

Original motif     Consensus sequence: ACCTTCTTGCTGTGA Reverse complement motif     Consensus sequence: TCACAGCAAGAAGGT

Best Matches for Motif ID 12 (Highest to Lowest)

Dataset #: 2
Motif ID: 112
Motif name: Motif 112
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 15
Similarity score: 0.110747

Alignment:
CAACAACAACAACAA
TCACAGCAAGAAGGT

Original motif     Consensus sequence: CAACAACAACAACAA Reverse complement motif     Consensus sequence: TTGTTGTTGTTGTTG


Dataset #: 1 Motif ID: 13 Motif name: Motif 13

Original motif     Consensus sequence: AAACAAACACA Reverse complement motif     Consensus sequence: TGTGTTTGTTT

Best Matches for Motif ID 13 (Highest to Lowest)

Dataset #: 1
Motif ID: 20
Motif name: Motif 20
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 11
Similarity score: 0.0451293

Alignment:
TTBTTTTTTTTTTT
-TGTGTTTGTTT--

Original motif     Consensus sequence: AAAAAAAAAAAVAA Reverse complement motif     Consensus sequence: TTBTTTTTTTTTTT


Dataset #: 1 Motif ID: 14 Motif name: Motif 14

Original motif     Consensus sequence: ATGCAAAC Reverse complement motif     Consensus sequence: GTTTGCAT

Best Matches for Motif ID 14 (Highest to Lowest)

Dataset #: 3
Motif ID: 167
Motif name: Motif 167
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.038828

Alignment:
ATGCAAAT
ATGCAAAC

Original motif     Consensus sequence: ATGCAAAT Reverse complement motif     Consensus sequence: ATTTGCAT


Dataset #: 1 Motif ID: 15 Motif name: Motif 15

Original motif     Consensus sequence: CAGTACCTGGATGG Reverse complement motif     Consensus sequence: CCATCCAGGTACTG

Best Matches for Motif ID 15 (Highest to Lowest)

Dataset #: 1
Motif ID: 57
Motif name: Motif 57
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0968237

Alignment:
GCAGCATCCACTTGG
-CAGTACCTGGATGG

Original motif     Consensus sequence: GCAGCATCCACTTGG Reverse complement motif     Consensus sequence: CCAAGTGGATGCTGC


Dataset #: 1 Motif ID: 16 Motif name: Motif 16

Original motif     Consensus sequence: GAGACCACATGGGAA Reverse complement motif     Consensus sequence: TTCCCATGTGGTCTC

Best Matches for Motif ID 16 (Highest to Lowest)

Dataset #: 2
Motif ID: 105
Motif name: Motif 105
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 15
Similarity score: 0.100691

Alignment:
AAGGACACATACGCC
GAGACCACATGGGAA

Original motif     Consensus sequence: AAGGACACATACGCC Reverse complement motif     Consensus sequence: GGCGTATGTGTCCTT


Dataset #: 1 Motif ID: 17 Motif name: Motif 17

Original motif     Consensus sequence: CAGCAACCTAGY Reverse complement motif     Consensus sequence: KCTAGGTTGCTG

Best Matches for Motif ID 17 (Highest to Lowest)

Dataset #: 2
Motif ID: 92
Motif name: Motif 92
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.0732171

Alignment:
ACCWCTGGGTTASAG
---KCTAGGTTGCTG

Original motif     Consensus sequence: ACCWCTGGGTTASAG Reverse complement motif     Consensus sequence: CTSTAACCCAGWGGT


Dataset #: 1 Motif ID: 18 Motif name: Motif 18

Original motif     Consensus sequence: CTTCACCT Reverse complement motif     Consensus sequence: AGGTGAAG

Best Matches for Motif ID 18 (Highest to Lowest)

Dataset #: 4
Motif ID: 207
Motif name: Motif 207
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.0503141

Alignment:
CTGCAGCTGCAG
----AGGTGAAG

Original motif     Consensus sequence: CTGCAGCTGCAG Reverse complement motif     Consensus sequence: CTGCAGCTGCAG


Dataset #: 1 Motif ID: 19 Motif name: Motif 19

Original motif     Consensus sequence: RGGTCAGAGGT Reverse complement motif     Consensus sequence: ACCTCTGACCK

Best Matches for Motif ID 19 (Highest to Lowest)

Dataset #: 3
Motif ID: 115
Motif name: Motif 115
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 11
Similarity score: 0.0089334

Alignment:
RGGTCARAGGTCA
RGGTCAGAGGT--

Original motif     Consensus sequence: RGGTCARAGGTCA Reverse complement motif     Consensus sequence: TGACCTKTGACCK


Dataset #: 1 Motif ID: 20 Motif name: Motif 20

Original motif     Consensus sequence: AAAAAAAAAAAVAA Reverse complement motif     Consensus sequence: TTBTTTTTTTTTTT

Best Matches for Motif ID 20 (Highest to Lowest)

Dataset #: 4
Motif ID: 174
Motif name: Motif 174
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 14
Similarity score: 0.0110201

Alignment:
GAAGAARAARAARAA
-AAAAAAAAAAAVAA

Original motif     Consensus sequence: GAAGAARAARAARAA Reverse complement motif     Consensus sequence: TTMTTKTTMTTCTTC


Dataset #: 1 Motif ID: 21 Motif name: Motif 21

Original motif     Consensus sequence: CAAACTCCACACAGA Reverse complement motif     Consensus sequence: TCTGTGTGGAGTTTG

Best Matches for Motif ID 21 (Highest to Lowest)

Dataset #: 2
Motif ID: 112
Motif name: Motif 112
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 15
Similarity score: 0.108201

Alignment:
TTGTTGTTGTTGTTG
TCTGTGTGGAGTTTG

Original motif     Consensus sequence: CAACAACAACAACAA Reverse complement motif     Consensus sequence: TTGTTGTTGTTGTTG


Dataset #: 1 Motif ID: 22 Motif name: Motif 22

Original motif     Consensus sequence: ACTGCAGC Reverse complement motif     Consensus sequence: GCTGCAGT

Best Matches for Motif ID 22 (Highest to Lowest)

Dataset #: 2
Motif ID: 109
Motif name: Motif 109
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0220835

Alignment:
CACTGAAGCGT
-ACTGCAGC--

Original motif     Consensus sequence: ACGCTTCAGTG Reverse complement motif     Consensus sequence: CACTGAAGCGT


Dataset #: 1 Motif ID: 23 Motif name: Motif 23

Original motif     Consensus sequence: AACCACTGAGCCACC Reverse complement motif     Consensus sequence: GGTGGCTCAGTGGTT

Best Matches for Motif ID 23 (Highest to Lowest)

Dataset #: 1
Motif ID: 28
Motif name: Motif 28
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 15
Similarity score: 0.0819749

Alignment:
TCCTAATGCCCCAGT
AACCACTGAGCCACC

Original motif     Consensus sequence: ACTGGGGCATTAGGA Reverse complement motif     Consensus sequence: TCCTAATGCCCCAGT


Dataset #: 1 Motif ID: 24 Motif name: Motif 24

Original motif     Consensus sequence: CAGTCCAAAGACATG Reverse complement motif     Consensus sequence: CATGTCTTTGGACTG

Best Matches for Motif ID 24 (Highest to Lowest)

Dataset #: 3
Motif ID: 114
Motif name: Motif 114
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 15
Similarity score: 0.114301

Alignment:
YYRRCCAATCAGAGV
CAGTCCAAAGACATG

Original motif     Consensus sequence: YYRRCCAATCAGAGV Reverse complement motif     Consensus sequence: VCTCTGATTGGKKKM


Dataset #: 1 Motif ID: 25 Motif name: Motif 25

Original motif     Consensus sequence: AGCAGGGCTGMGCC Reverse complement motif     Consensus sequence: GGCYCAGCCCTGCT

Best Matches for Motif ID 25 (Highest to Lowest)

Dataset #: 4
Motif ID: 177
Motif name: Motif 177
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 14
Similarity score: 0.0853758

Alignment:
CVSCBSRGCYSVGSBG
-AGCAGGGCTGMGCC-

Original motif     Consensus sequence: CVSCBSRGCYSVGSBG Reverse complement motif     Consensus sequence: CBSCVSMGCKSBGSVG


Dataset #: 1 Motif ID: 26 Motif name: Motif 26

Original motif     Consensus sequence: GTAGGCTAAA Reverse complement motif     Consensus sequence: TTTAGCCTAC

Best Matches for Motif ID 26 (Highest to Lowest)

Dataset #: 3
Motif ID: 160
Motif name: Motif 160
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.0558871

Alignment:
AACTAGCTTATT
-TTTAGCCTAC-

Original motif     Consensus sequence: AATAAGCTAGTT Reverse complement motif     Consensus sequence: AACTAGCTTATT


Dataset #: 1 Motif ID: 27 Motif name: Motif 27

Original motif     Consensus sequence: CTGCWGCT Reverse complement motif     Consensus sequence: AGCWGCAG

Best Matches for Motif ID 27 (Highest to Lowest)

Dataset #: 4
Motif ID: 207
Motif name: Motif 207
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0318231

Alignment:
CTGCAGCTGCAG
CTGCWGCT----

Original motif     Consensus sequence: CTGCAGCTGCAG Reverse complement motif     Consensus sequence: CTGCAGCTGCAG


Dataset #: 1 Motif ID: 28 Motif name: Motif 28

Original motif     Consensus sequence: ACTGGGGCATTAGGA Reverse complement motif     Consensus sequence: TCCTAATGCCCCAGT

Best Matches for Motif ID 28 (Highest to Lowest)

Dataset #: 1
Motif ID: 23
Motif name: Motif 23
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 15
Similarity score: 0.113324

Alignment:
GGTGGCTCAGTGGTT
ACTGGGGCATTAGGA

Original motif     Consensus sequence: AACCACTGAGCCACC Reverse complement motif     Consensus sequence: GGTGGCTCAGTGGTT


Dataset #: 1 Motif ID: 29 Motif name: Motif 29

Original motif     Consensus sequence: ACAATGCA Reverse complement motif     Consensus sequence: TGCATTGT

Best Matches for Motif ID 29 (Highest to Lowest)

Dataset #: 4
Motif ID: 212
Motif name: Motif 212
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0287733

Alignment:
ACAATGGA
ACAATGCA

Original motif     Consensus sequence: ACAATGGA Reverse complement motif     Consensus sequence: TCCATTGT


Dataset #: 1 Motif ID: 30 Motif name: Motif 30

Original motif     Consensus sequence: TCCTCCAGK Reverse complement motif     Consensus sequence: RCTGGAGGA

Best Matches for Motif ID 30 (Highest to Lowest)

Dataset #: 3
Motif ID: 169
Motif name: Motif 169
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 9
Similarity score: 0.0438731

Alignment:
DMCTGCAGKH
TCCTCCAGK-

Original motif     Consensus sequence: HRCTGCAGYD Reverse complement motif     Consensus sequence: DMCTGCAGKH


Dataset #: 1 Motif ID: 31 Motif name: Motif 31

Original motif     Consensus sequence: GCGCATGCGCA Reverse complement motif     Consensus sequence: TGCGCATGCGC

Best Matches for Motif ID 31 (Highest to Lowest)

Dataset #: 2
Motif ID: 82
Motif name: Motif 82
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0

Alignment:
TGCGCATGCGCA
-GCGCATGCGCA

Original motif     Consensus sequence: TGCGCATGCGCA Reverse complement motif     Consensus sequence: TGCGCATGCGCA


Dataset #: 1 Motif ID: 32 Motif name: Motif 32

Original motif     Consensus sequence: HTACWGTAD Reverse complement motif     Consensus sequence: DTACWGTAH

Best Matches for Motif ID 32 (Highest to Lowest)

Dataset #: 2
Motif ID: 99
Motif name: Motif 99
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 9
Similarity score: 0.0301636

Alignment:
ATAAAGTAAGTT
HTACWGTAD---

Original motif     Consensus sequence: AACTTACTTTAT Reverse complement motif     Consensus sequence: ATAAAGTAAGTT


Dataset #: 1 Motif ID: 33 Motif name: Motif 33

Original motif     Consensus sequence: GGTCATTAAAAATCC Reverse complement motif     Consensus sequence: GGATTTTTAATGACC

Best Matches for Motif ID 33 (Highest to Lowest)

Dataset #: 4
Motif ID: 174
Motif name: Motif 174
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 15
Similarity score: 0.126822

Alignment:
TTMTTKTTMTTCTTC
GGATTTTTAATGACC

Original motif     Consensus sequence: GAAGAARAARAARAA Reverse complement motif     Consensus sequence: TTMTTKTTMTTCTTC


Dataset #: 1 Motif ID: 34 Motif name: Motif 34

Original motif     Consensus sequence: CAGTATAG Reverse complement motif     Consensus sequence: CTATACTG

Best Matches for Motif ID 34 (Highest to Lowest)

Dataset #: 4
Motif ID: 215
Motif name: Motif 215
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 6
Number of overlap: 8
Similarity score: 0.0407199

Alignment:
CTATCCTGGCTGT
CTATACTG-----

Original motif     Consensus sequence: ACAGCCAGGATAG Reverse complement motif     Consensus sequence: CTATCCTGGCTGT


Dataset #: 1 Motif ID: 35 Motif name: Motif 35

Original motif     Consensus sequence: TAACGTTA Reverse complement motif     Consensus sequence: TAACGTTA

Best Matches for Motif ID 35 (Highest to Lowest)

Dataset #: 2
Motif ID: 69
Motif name: Motif 69
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0522776

Alignment:
TTKTGACGTCAMAA
---TAACGTTA---

Original motif     Consensus sequence: TTRTGACGTCAYAA Reverse complement motif     Consensus sequence: TTKTGACGTCAMAA


Dataset #: 1 Motif ID: 36 Motif name: Motif 36

Original motif     Consensus sequence: AATAAAGC Reverse complement motif     Consensus sequence: GCTTTATT

Best Matches for Motif ID 36 (Highest to Lowest)

Dataset #: 3
Motif ID: 145
Motif name: Motif 145
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.048975

Alignment:
AAACAAAACAA
-AATAAAGC--

Original motif     Consensus sequence: AAACAAAACAA Reverse complement motif     Consensus sequence: TTGTTTTGTTT


Dataset #: 1 Motif ID: 37 Motif name: Motif 37

Original motif     Consensus sequence: AGGAAGTGC Reverse complement motif     Consensus sequence: GCACTTCCT

Best Matches for Motif ID 37 (Highest to Lowest)

Dataset #: 1
Motif ID: 40
Motif name: Motif 40
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 9
Similarity score: 0.0432829

Alignment:
CTGGAAGGGCAT
-AGGAAGTGC--

Original motif     Consensus sequence: ATGCCCTTCCAG Reverse complement motif     Consensus sequence: CTGGAAGGGCAT


Dataset #: 1 Motif ID: 38 Motif name: Motif 38

Original motif     Consensus sequence: CAACAACAACA Reverse complement motif     Consensus sequence: TGTTGTTGTTG

Best Matches for Motif ID 38 (Highest to Lowest)

Dataset #: 2
Motif ID: 112
Motif name: Motif 112
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.00405689

Alignment:
CAACAACAACAACAA
CAACAACAACA----

Original motif     Consensus sequence: CAACAACAACAACAA Reverse complement motif     Consensus sequence: TTGTTGTTGTTGTTG


Dataset #: 1 Motif ID: 39 Motif name: Motif 39

Original motif     Consensus sequence: CAACTGACCCAG Reverse complement motif     Consensus sequence: CTGGGTCAGTTG

Best Matches for Motif ID 39 (Highest to Lowest)

Dataset #: 1
Motif ID: 28
Motif name: Motif 28
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 12
Similarity score: 0.0400633

Alignment:
TCCTAATGCCCCAGT
-CAACTGACCCAG--

Original motif     Consensus sequence: ACTGGGGCATTAGGA Reverse complement motif     Consensus sequence: TCCTAATGCCCCAGT


Dataset #: 1 Motif ID: 40 Motif name: Motif 40

Original motif     Consensus sequence: ATGCCCTTCCAG Reverse complement motif     Consensus sequence: CTGGAAGGGCAT

Best Matches for Motif ID 40 (Highest to Lowest)

Dataset #: 1
Motif ID: 67
Motif name: Motif 67
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.0765567

Alignment:
CMGGGAGAACAT
CTGGAAGGGCAT

Original motif     Consensus sequence: ATGTTCTCCCYG Reverse complement motif     Consensus sequence: CMGGGAGAACAT


Dataset #: 1 Motif ID: 41 Motif name: Motif 41

Original motif     Consensus sequence: AGAGTCAGGACCT Reverse complement motif     Consensus sequence: AGGTCCTGACTCT

Best Matches for Motif ID 41 (Highest to Lowest)

Dataset #: 1
Motif ID: 45
Motif name: Motif 45
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 13
Similarity score: 0.0891072

Alignment:
ARACCCCTACTCTTT
AGGTCCTGACTCT--

Original motif     Consensus sequence: AAAGAGTAGGGGTKT Reverse complement motif     Consensus sequence: ARACCCCTACTCTTT


Dataset #: 1 Motif ID: 42 Motif name: Motif 42

Original motif     Consensus sequence: AATTTGGCCAGGAC Reverse complement motif     Consensus sequence: GTCCTGGCCAAATT

Best Matches for Motif ID 42 (Highest to Lowest)

Dataset #: 3
Motif ID: 126
Motif name: Motif 126
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.066586

Alignment:
RVTCTCGCGAGABY
AATTTGGCCAGGAC

Original motif     Consensus sequence: RVTCTCGCGAGABY Reverse complement motif     Consensus sequence: MVTCTCGCGAGABK


Dataset #: 1 Motif ID: 43 Motif name: Motif 43

Original motif     Consensus sequence: CACCAACCCC Reverse complement motif     Consensus sequence: GGGGTTGGTG

Best Matches for Motif ID 43 (Highest to Lowest)

Dataset #: 3
Motif ID: 118
Motif name: Motif 118
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.062429

Alignment:
CCCCTCCCCCY
CACCAACCCC-

Original motif     Consensus sequence: CCCCTCCCCCY Reverse complement motif     Consensus sequence: KGGGGGAGGGG


Dataset #: 1 Motif ID: 44 Motif name: Motif 44

Original motif     Consensus sequence: GCGCGCGCDCGT Reverse complement motif     Consensus sequence: ACGDGCGCGCGC

Best Matches for Motif ID 44 (Highest to Lowest)

Dataset #: 3
Motif ID: 125
Motif name: Motif 125
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 12
Similarity score: 0.0767505

Alignment:
SVASTGCGCATGCG
-ACGDGCGCGCGC-

Original motif     Consensus sequence: CGCATGCGCASTVS Reverse complement motif     Consensus sequence: SVASTGCGCATGCG


Dataset #: 1 Motif ID: 45 Motif name: Motif 45

Original motif     Consensus sequence: AAAGAGTAGGGGTKT Reverse complement motif     Consensus sequence: ARACCCCTACTCTTT

Best Matches for Motif ID 45 (Highest to Lowest)

Dataset #: 1
Motif ID: 53
Motif name: Motif 53
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 15
Similarity score: 0.0983716

Alignment:
CAACCTGKGGTCTGT
ARACCCCTACTCTTT

Original motif     Consensus sequence: ACAGACCRCAGGTTG Reverse complement motif     Consensus sequence: CAACCTGKGGTCTGT


Dataset #: 1 Motif ID: 46 Motif name: Motif 46

Original motif     Consensus sequence: GTCAGTCA Reverse complement motif     Consensus sequence: TGACTGAC

Best Matches for Motif ID 46 (Highest to Lowest)

Dataset #: 3
Motif ID: 139
Motif name: Motif 139
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0256686

Alignment:
GTGATTGACAG
-TGACTGAC--

Original motif     Consensus sequence: CTGTCAATCAC Reverse complement motif     Consensus sequence: GTGATTGACAG


Dataset #: 1 Motif ID: 47 Motif name: Motif 47

Original motif     Consensus sequence: GCCMCGCCCA Reverse complement motif     Consensus sequence: TGGGCGRGGC

Best Matches for Motif ID 47 (Highest to Lowest)

Dataset #: 3
Motif ID: 153
Motif name: Motif 153
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 10
Similarity score: 0.0511065

Alignment:
GCCTGGTAGAGGCTA
---TGGGCGRGGC--

Original motif     Consensus sequence: GCCTGGTAGAGGCTA Reverse complement motif     Consensus sequence: TAGCCTCTACCAGGC


Dataset #: 1 Motif ID: 48 Motif name: Motif 48

Original motif     Consensus sequence: TGAATGAAD Reverse complement motif     Consensus sequence: DTTCATTCA

Best Matches for Motif ID 48 (Highest to Lowest)

Dataset #: 1
Motif ID: 2
Motif name: Motif 2
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 9
Similarity score: 0.0553867

Alignment:
CARCCAATCAGA
--DTTCATTCA-

Original motif     Consensus sequence: CARCCAATCAGA Reverse complement motif     Consensus sequence: TCTGATTGGMTG


Dataset #: 1 Motif ID: 49 Motif name: Motif 49

Original motif     Consensus sequence: GGRGGAAACCS Reverse complement motif     Consensus sequence: SGGTTTCCKCC

Best Matches for Motif ID 49 (Highest to Lowest)

Dataset #: 3
Motif ID: 137
Motif name: Motif 137
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.0697246

Alignment:
HDTTTCCCGCCA
SGGTTTCCKCC-

Original motif     Consensus sequence: TGGCGGGAAADH Reverse complement motif     Consensus sequence: HDTTTCCCGCCA


Dataset #: 1 Motif ID: 50 Motif name: Motif 50

Original motif     Consensus sequence: TCATCCGAAAGAC Reverse complement motif     Consensus sequence: GTCTTTCGGATGA

Best Matches for Motif ID 50 (Highest to Lowest)

Dataset #: 1
Motif ID: 33
Motif name: Motif 33
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 13
Similarity score: 0.092173

Alignment:
GGATTTTTAATGACC
GTCTTTCGGATGA--

Original motif     Consensus sequence: GGTCATTAAAAATCC Reverse complement motif     Consensus sequence: GGATTTTTAATGACC


Dataset #: 1 Motif ID: 51 Motif name: Motif 51

Original motif     Consensus sequence: CAACTCTCACATGG Reverse complement motif     Consensus sequence: CCATGTGAGAGTTG

Best Matches for Motif ID 51 (Highest to Lowest)

Dataset #: 1
Motif ID: 57
Motif name: Motif 57
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 14
Similarity score: 0.0667893

Alignment:
GCAGCATCCACTTGG
-CAACTCTCACATGG

Original motif     Consensus sequence: GCAGCATCCACTTGG Reverse complement motif     Consensus sequence: CCAAGTGGATGCTGC


Dataset #: 1 Motif ID: 52 Motif name: Motif 52

Original motif     Consensus sequence: AGTGAAGGGGA Reverse complement motif     Consensus sequence: TCCCCTTCACT

Best Matches for Motif ID 52 (Highest to Lowest)

Dataset #: 1
Motif ID: 45
Motif name: Motif 45
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 11
Similarity score: 0.076096

Alignment:
AAAGAGTAGGGGTKT
--AGTGAAGGGGA--

Original motif     Consensus sequence: AAAGAGTAGGGGTKT Reverse complement motif     Consensus sequence: ARACCCCTACTCTTT


Dataset #: 1 Motif ID: 53 Motif name: Motif 53

Original motif     Consensus sequence: ACAGACCRCAGGTTG Reverse complement motif     Consensus sequence: CAACCTGKGGTCTGT

Best Matches for Motif ID 53 (Highest to Lowest)

Dataset #: 1
Motif ID: 45
Motif name: Motif 45
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 15
Similarity score: 0.0996503

Alignment:
ARACCCCTACTCTTT
CAACCTGKGGTCTGT

Original motif     Consensus sequence: AAAGAGTAGGGGTKT Reverse complement motif     Consensus sequence: ARACCCCTACTCTTT


Dataset #: 1 Motif ID: 54 Motif name: Motif 54

Original motif     Consensus sequence: AAACACAA Reverse complement motif     Consensus sequence: TTGTGTTT

Best Matches for Motif ID 54 (Highest to Lowest)

Dataset #: 3
Motif ID: 145
Motif name: Motif 145
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0429527

Alignment:
TTGTTTTGTTT
---TTGTGTTT

Original motif     Consensus sequence: AAACAAAACAA Reverse complement motif     Consensus sequence: TTGTTTTGTTT


Dataset #: 1 Motif ID: 55 Motif name: Motif 55

Original motif     Consensus sequence: CTTTGATC Reverse complement motif     Consensus sequence: GATCAAAG

Best Matches for Motif ID 55 (Highest to Lowest)

Dataset #: 1
Motif ID: 62
Motif name: Motif 62
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0354166

Alignment:
GTCAATCAAAG
---GATCAAAG

Original motif     Consensus sequence: GTCAATCAAAG Reverse complement motif     Consensus sequence: CTTTGATTGAC


Dataset #: 1 Motif ID: 56 Motif name: Motif 56

Original motif     Consensus sequence: AGCCAATAG Reverse complement motif     Consensus sequence: CTATTGGCT

Best Matches for Motif ID 56 (Highest to Lowest)

Dataset #: 3
Motif ID: 166
Motif name: Motif 166
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 9
Similarity score: 0.0343072

Alignment:
TGATTGGCTG
CTATTGGCT-

Original motif     Consensus sequence: CAGCCAATCA Reverse complement motif     Consensus sequence: TGATTGGCTG


Dataset #: 1 Motif ID: 57 Motif name: Motif 57

Original motif     Consensus sequence: GCAGCATCCACTTGG Reverse complement motif     Consensus sequence: CCAAGTGGATGCTGC

Best Matches for Motif ID 57 (Highest to Lowest)

Dataset #: 1
Motif ID: 53
Motif name: Motif 53
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 15
Similarity score: 0.110547

Alignment:
CAACCTGKGGTCTGT
CCAAGTGGATGCTGC

Original motif     Consensus sequence: ACAGACCRCAGGTTG Reverse complement motif     Consensus sequence: CAACCTGKGGTCTGT


Dataset #: 1 Motif ID: 58 Motif name: Motif 58

Original motif     Consensus sequence: TACAAAGGGAGAA Reverse complement motif     Consensus sequence: TTCTCCCTTTGTA

Best Matches for Motif ID 58 (Highest to Lowest)

Dataset #: 1
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 13
Similarity score: 0.0859393

Alignment:
AGAGAGAGAGAGAGA
-TACAAAGGGAGAA-

Original motif     Consensus sequence: AGAGAGAGAGAGAGA Reverse complement motif     Consensus sequence: TCTCTCTCTCTCTCT


Dataset #: 1 Motif ID: 59 Motif name: Motif 59

Original motif     Consensus sequence: CCCTCTGATGACAY Reverse complement motif     Consensus sequence: KTGTCATCAGAGGG

Best Matches for Motif ID 59 (Highest to Lowest)

Dataset #: 1
Motif ID: 24
Motif name: Motif 24
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0953905

Alignment:
CAGTCCAAAGACATG
CCCTCTGATGACAY-

Original motif     Consensus sequence: CAGTCCAAAGACATG Reverse complement motif     Consensus sequence: CATGTCTTTGGACTG


Dataset #: 1 Motif ID: 60 Motif name: Motif 60

Original motif     Consensus sequence: GCATTAAAACAGC Reverse complement motif     Consensus sequence: GCTGTTTTAATGC

Best Matches for Motif ID 60 (Highest to Lowest)

Dataset #: 3
Motif ID: 170
Motif name: Motif 170
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 13
Similarity score: 0.0790042

Alignment:
GCTTGTAAACAGT
GCATTAAAACAGC

Original motif     Consensus sequence: ACTGTTTACAAGC Reverse complement motif     Consensus sequence: GCTTGTAAACAGT


Dataset #: 1 Motif ID: 61 Motif name: Motif 61

Original motif     Consensus sequence: ATGAATATTT Reverse complement motif     Consensus sequence: AAATATTCAT

Best Matches for Motif ID 61 (Highest to Lowest)

Dataset #: 3
Motif ID: 138
Motif name: Motif 138
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.0136902

Alignment:
CTCATGAATAWTYA
---ATGAATATTT-

Original motif     Consensus sequence: CTCATGAATAWTYA Reverse complement motif     Consensus sequence: TMAWTATTCATGAG


Dataset #: 1 Motif ID: 62 Motif name: Motif 62

Original motif     Consensus sequence: GTCAATCAAAG Reverse complement motif     Consensus sequence: CTTTGATTGAC

Best Matches for Motif ID 62 (Highest to Lowest)

Dataset #: 3
Motif ID: 114
Motif name: Motif 114
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.0544683

Alignment:
YYRRCCAATCAGAGV
---GTCAATCAAAG-

Original motif     Consensus sequence: YYRRCCAATCAGAGV Reverse complement motif     Consensus sequence: VCTCTGATTGGKKKM


Dataset #: 1 Motif ID: 63 Motif name: Motif 63

Original motif     Consensus sequence: AAACACCCATACAC Reverse complement motif     Consensus sequence: GTGTATGGGTGTTT

Best Matches for Motif ID 63 (Highest to Lowest)

Dataset #: 1
Motif ID: 1
Motif name: Motif 1
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0536732

Alignment:
ACACACACACACAC
AAACACCCATACAC

Original motif     Consensus sequence: ACACACACACACAC Reverse complement motif     Consensus sequence: GTGTGTGTGTGTGT


Dataset #: 1 Motif ID: 64 Motif name: Motif 64

Original motif     Consensus sequence: CGTCTCKYC Reverse complement motif     Consensus sequence: GKRGAGACG

Best Matches for Motif ID 64 (Highest to Lowest)

Dataset #: 4
Motif ID: 226
Motif name: Motif 226
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 9
Similarity score: 0.0271136

Alignment:
CGTCGCGTCGCS
CGTCTCKYC---

Original motif     Consensus sequence: CGTCGCGTCGCS Reverse complement motif     Consensus sequence: SGCGACGCGACG


Dataset #: 1 Motif ID: 65 Motif name: Motif 65

Original motif     Consensus sequence: CTGGAGCTC Reverse complement motif     Consensus sequence: GAGCTCCAG

Best Matches for Motif ID 65 (Highest to Lowest)

Dataset #: 4
Motif ID: 200
Motif name: Motif 200
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 9
Similarity score: 0.0509286

Alignment:
GCAGAGCTYGAG
---GAGCTCCAG

Original motif     Consensus sequence: CTCKAGCTCTGC Reverse complement motif     Consensus sequence: GCAGAGCTYGAG


Dataset #: 1 Motif ID: 66 Motif name: Motif 66

Original motif     Consensus sequence: CTAATGAA Reverse complement motif     Consensus sequence: TTCATTAG

Best Matches for Motif ID 66 (Highest to Lowest)

Dataset #: 3
Motif ID: 138
Motif name: Motif 138
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0251785

Alignment:
CTCATGAATAWTYA
CTAATGAA------

Original motif     Consensus sequence: CTCATGAATAWTYA Reverse complement motif     Consensus sequence: TMAWTATTCATGAG


Dataset #: 1 Motif ID: 67 Motif name: Motif 67

Original motif     Consensus sequence: ATGTTCTCCCYG Reverse complement motif     Consensus sequence: CMGGGAGAACAT

Best Matches for Motif ID 67 (Highest to Lowest)

Dataset #: 1
Motif ID: 40
Motif name: Motif 40
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.0586585

Alignment:
CTGGAAGGGCAT
CMGGGAGAACAT

Original motif     Consensus sequence: ATGCCCTTCCAG Reverse complement motif     Consensus sequence: CTGGAAGGGCAT


Dataset #: 1 Motif ID: 68 Motif name: Motif 68

Original motif     Consensus sequence: TCATGGCCCTTTAA Reverse complement motif     Consensus sequence: TTAAAGGGCCATGA

Best Matches for Motif ID 68 (Highest to Lowest)

Dataset #: 4
Motif ID: 176
Motif name: Motif 176
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0931782

Alignment:
RDWATAGCGCCATCT
-TTAAAGGGCCATGA

Original motif     Consensus sequence: AGATGGCGCTATWHM Reverse complement motif     Consensus sequence: RDWATAGCGCCATCT


Dataset #: 2 Motif ID: 69 Motif name: Motif 69

Original motif     Consensus sequence: TTRTGACGTCAYAA Reverse complement motif     Consensus sequence: TTKTGACGTCAMAA

Best Matches for Motif ID 69 (Highest to Lowest)

Dataset #: 3
Motif ID: 117
Motif name: Motif 117
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0187874

Alignment:
BBRTGACGTCAYVV
TTRTGACGTCAYAA

Original motif     Consensus sequence: BBRTGACGTCAYVV Reverse complement motif     Consensus sequence: VVMTGACGTCAKBB


Dataset #: 2 Motif ID: 70 Motif name: Motif 70

Original motif     Consensus sequence: CTACGTCAYMA Reverse complement motif     Consensus sequence: TYMTGACGTAG

Best Matches for Motif ID 70 (Highest to Lowest)

Dataset #: 2
Motif ID: 69
Motif name: Motif 69
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0212184

Alignment:
TTRTGACGTCAYAA
---CTACGTCAYMA

Original motif     Consensus sequence: TTRTGACGTCAYAA Reverse complement motif     Consensus sequence: TTKTGACGTCAMAA


Dataset #: 2 Motif ID: 71 Motif name: Motif 71

Original motif     Consensus sequence: AAACAAWGGV Reverse complement motif     Consensus sequence: BCCWTTGTTT

Best Matches for Motif ID 71 (Highest to Lowest)

Dataset #: 1
Motif ID: 13
Motif name: Motif 13
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.0557399

Alignment:
AAACAAACACA
AAACAAWGGV-

Original motif     Consensus sequence: AAACAAACACA Reverse complement motif     Consensus sequence: TGTGTTTGTTT


Dataset #: 2 Motif ID: 72 Motif name: Motif 72

Original motif     Consensus sequence: RRTCACGTGAYY Reverse complement motif     Consensus sequence: KKTCACGTGAMM

Best Matches for Motif ID 72 (Highest to Lowest)

Dataset #: 3
Motif ID: 117
Motif name: Motif 117
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 12
Similarity score: 0.0361105

Alignment:
BBRTGACGTCAYVV
-RRTCACGTGAYY-

Original motif     Consensus sequence: BBRTGACGTCAYVV Reverse complement motif     Consensus sequence: VVMTGACGTCAKBB


Dataset #: 2 Motif ID: 73 Motif name: Motif 73

Original motif     Consensus sequence: CGCCAYCTHGCG Reverse complement motif     Consensus sequence: CGCHAGMTGGCG

Best Matches for Motif ID 73 (Highest to Lowest)

Dataset #: 1
Motif ID: 3
Motif name: Motif 3
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 12
Similarity score: 0.0690355

Alignment:
MGCCCKCTGSTGG
-CGCCAYCTHGCG

Original motif     Consensus sequence: CCASCAGRGGGCR Reverse complement motif     Consensus sequence: MGCCCKCTGSTGG


Dataset #: 2 Motif ID: 74 Motif name: Motif 74

Original motif     Consensus sequence: AARYAAACA Reverse complement motif     Consensus sequence: TGTTTKKTT

Best Matches for Motif ID 74 (Highest to Lowest)

Dataset #: 3
Motif ID: 148
Motif name: Motif 148
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 9
Similarity score: 0.0120606

Alignment:
TTGTTTKTTTT
-TGTTTKKTT-

Original motif     Consensus sequence: AAAAYAAACAA Reverse complement motif     Consensus sequence: TTGTTTKTTTT


Dataset #: 2 Motif ID: 75 Motif name: Motif 75

Original motif     Consensus sequence: AAAGAAAAARGV Reverse complement motif     Consensus sequence: VCKTTTTTCTTT

Best Matches for Motif ID 75 (Highest to Lowest)

Dataset #: 4
Motif ID: 174
Motif name: Motif 174
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.0432564

Alignment:
GAAGAARAARAARAA
---AAAGAAAAARGV

Original motif     Consensus sequence: GAAGAARAARAARAA Reverse complement motif     Consensus sequence: TTMTTKTTMTTCTTC


Dataset #: 2 Motif ID: 76 Motif name: Motif 76

Original motif     Consensus sequence: CACGTGAC Reverse complement motif     Consensus sequence: GTCACGTG

Best Matches for Motif ID 76 (Highest to Lowest)

Dataset #: 3
Motif ID: 155
Motif name: Motif 155
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0174803

Alignment:
TCACGTGACC
-CACGTGAC-

Original motif     Consensus sequence: TCACGTGACC Reverse complement motif     Consensus sequence: GGTCACGTGA


Dataset #: 2 Motif ID: 77 Motif name: Motif 77

Original motif     Consensus sequence: VTGACGTCAB Reverse complement motif     Consensus sequence: VTGACGTCAB

Best Matches for Motif ID 77 (Highest to Lowest)

Dataset #: 3
Motif ID: 117
Motif name: Motif 117
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 10
Similarity score: 0

Alignment:
BBRTGACGTCAYVV
--VTGACGTCAB--

Original motif     Consensus sequence: BBRTGACGTCAYVV Reverse complement motif     Consensus sequence: VVMTGACGTCAKBB


Dataset #: 2 Motif ID: 78 Motif name: Motif 78

Original motif     Consensus sequence: ATGGCGCC Reverse complement motif     Consensus sequence: GGCGCCAT

Best Matches for Motif ID 78 (Highest to Lowest)

Dataset #: 4
Motif ID: 189
Motif name: Motif 189
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 8
Similarity score: 0.0194779

Alignment:
BGTCGCCATTTT
-GGCGCCAT---

Original motif     Consensus sequence: AAAATGGCGACB Reverse complement motif     Consensus sequence: BGTCGCCATTTT


Dataset #: 2 Motif ID: 79 Motif name: Motif 79

Original motif     Consensus sequence: TYRACCAATCA Reverse complement motif     Consensus sequence: TGATTGGTMKA

Best Matches for Motif ID 79 (Highest to Lowest)

Dataset #: 3
Motif ID: 114
Motif name: Motif 114
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0

Alignment:
YYRRCCAATCAGAGV
TYRACCAATCA----

Original motif     Consensus sequence: YYRRCCAATCAGAGV Reverse complement motif     Consensus sequence: VCTCTGATTGGKKKM


Dataset #: 2 Motif ID: 80 Motif name: Motif 80

Original motif     Consensus sequence: ACGTCACAAT Reverse complement motif     Consensus sequence: ATTGTGACGT

Best Matches for Motif ID 80 (Highest to Lowest)

Dataset #: 4
Motif ID: 217
Motif name: Motif 217
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 6
Number of overlap: 10
Similarity score: 0.0625059

Alignment:
ACGTATCAGTCCACG
ACGTCACAAT-----

Original motif     Consensus sequence: CGTGGACTGATACGT Reverse complement motif     Consensus sequence: ACGTATCAGTCCACG


Dataset #: 2 Motif ID: 81 Motif name: Motif 81

Original motif     Consensus sequence: GGCGGGRA Reverse complement motif     Consensus sequence: TKCCCGCC

Best Matches for Motif ID 81 (Highest to Lowest)

Dataset #: 3
Motif ID: 137
Motif name: Motif 137
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0123199

Alignment:
HDTTTCCCGCCA
---TKCCCGCC-

Original motif     Consensus sequence: TGGCGGGAAADH Reverse complement motif     Consensus sequence: HDTTTCCCGCCA


Dataset #: 2 Motif ID: 82 Motif name: Motif 82

Original motif     Consensus sequence: TGCGCATGCGCA Reverse complement motif     Consensus sequence: TGCGCATGCGCA

Best Matches for Motif ID 82 (Highest to Lowest)

Dataset #: 2
Motif ID: 105
Motif name: Motif 105
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 12
Similarity score: 0.0865056

Alignment:
GGCGTATGTGTCCTT
TGCGCATGCGCA---

Original motif     Consensus sequence: AAGGACACATACGCC Reverse complement motif     Consensus sequence: GGCGTATGTGTCCTT


Dataset #: 2 Motif ID: 83 Motif name: Motif 83

Original motif     Consensus sequence: AACAAAGAA Reverse complement motif     Consensus sequence: TTCTTTGTT

Best Matches for Motif ID 83 (Highest to Lowest)

Dataset #: 3
Motif ID: 148
Motif name: Motif 148
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 9
Similarity score: 0.0390014

Alignment:
AAAAYAAACAA
--AACAAAGAA

Original motif     Consensus sequence: AAAAYAAACAA Reverse complement motif     Consensus sequence: TTGTTTKTTTT


Dataset #: 2 Motif ID: 84 Motif name: Motif 84

Original motif     Consensus sequence: CATAGAAATC Reverse complement motif     Consensus sequence: GATTTCTATG

Best Matches for Motif ID 84 (Highest to Lowest)

Dataset #: 3
Motif ID: 168
Motif name: Motif 168
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 10
Similarity score: 0.0638283

Alignment:
ATAGTAGAAWTYGGC
--CATAGAAATC---

Original motif     Consensus sequence: ATAGTAGAAWTYGGC Reverse complement motif     Consensus sequence: GCCKAWTTCTACTAT


Dataset #: 2 Motif ID: 85 Motif name: Motif 85

Original motif     Consensus sequence: ACAGCAGC Reverse complement motif     Consensus sequence: GCTGCTGT

Best Matches for Motif ID 85 (Highest to Lowest)

Dataset #: 3
Motif ID: 169
Motif name: Motif 169
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0318837

Alignment:
HRCTGCAGYD
-ACAGCAGC-

Original motif     Consensus sequence: HRCTGCAGYD Reverse complement motif     Consensus sequence: DMCTGCAGKH


Dataset #: 2 Motif ID: 86 Motif name: Motif 86

Original motif     Consensus sequence: BTAATTAV Reverse complement motif     Consensus sequence: VTAATTAB

Best Matches for Motif ID 86 (Highest to Lowest)

Dataset #: 1
Motif ID: 66
Motif name: Motif 66
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0485388

Alignment:
CTAATGAA
BTAATTAV

Original motif     Consensus sequence: CTAATGAA Reverse complement motif     Consensus sequence: TTCATTAG


Dataset #: 2 Motif ID: 87 Motif name: Motif 87

Original motif     Consensus sequence: GGATTCGAACC Reverse complement motif     Consensus sequence: GGTTCGAATCC

Best Matches for Motif ID 87 (Highest to Lowest)

Dataset #: 1
Motif ID: 11
Motif name: Motif 11
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 11
Similarity score: 0.0455576

Alignment:
GKCTCGAACCAGC
GGTTCGAATCC--

Original motif     Consensus sequence: GCTGGTTCGAGYC Reverse complement motif     Consensus sequence: GKCTCGAACCAGC


Dataset #: 2 Motif ID: 88 Motif name: Motif 88

Original motif     Consensus sequence: GGGGAWTCCCC Reverse complement motif     Consensus sequence: GGGGAWTCCCC

Best Matches for Motif ID 88 (Highest to Lowest)

Dataset #: 1
Motif ID: 49
Motif name: Motif 49
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0816174

Alignment:
SGGTTTCCKCC
GGGGAWTCCCC

Original motif     Consensus sequence: GGRGGAAACCS Reverse complement motif     Consensus sequence: SGGTTTCCKCC


Dataset #: 2 Motif ID: 89 Motif name: Motif 89

Original motif     Consensus sequence: CGAGTTACCATGTA Reverse complement motif     Consensus sequence: TACATGGTAACTCG

Best Matches for Motif ID 89 (Highest to Lowest)

Dataset #: 3
Motif ID: 125
Motif name: Motif 125
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.100708

Alignment:
SVASTGCGCATGCG
CGAGTTACCATGTA

Original motif     Consensus sequence: CGCATGCGCASTVS Reverse complement motif     Consensus sequence: SVASTGCGCATGCG


Dataset #: 2 Motif ID: 90 Motif name: Motif 90

Original motif     Consensus sequence: GCCCSGGGC Reverse complement motif     Consensus sequence: GCCCSGGGC

Best Matches for Motif ID 90 (Highest to Lowest)

Dataset #: 4
Motif ID: 177
Motif name: Motif 177
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 9
Similarity score: 0.0666815

Alignment:
CVSCBSRGCYSVGSBG
------GCCCSGGGC-

Original motif     Consensus sequence: CVSCBSRGCYSVGSBG Reverse complement motif     Consensus sequence: CBSCVSMGCKSBGSVG


Dataset #: 2 Motif ID: 91 Motif name: Motif 91

Original motif     Consensus sequence: AAACTAAAC Reverse complement motif     Consensus sequence: GTTTAGTTT

Best Matches for Motif ID 91 (Highest to Lowest)

Dataset #: 3
Motif ID: 145
Motif name: Motif 145
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 9
Similarity score: 0.0349087

Alignment:
TTGTTTTGTTT
--GTTTAGTTT

Original motif     Consensus sequence: AAACAAAACAA Reverse complement motif     Consensus sequence: TTGTTTTGTTT


Dataset #: 2 Motif ID: 92 Motif name: Motif 92

Original motif     Consensus sequence: ACCWCTGGGTTASAG Reverse complement motif     Consensus sequence: CTSTAACCCAGWGGT

Best Matches for Motif ID 92 (Highest to Lowest)

Dataset #: 3
Motif ID: 156
Motif name: Motif 156
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 15
Similarity score: 0.101172

Alignment:
GACAGAGGGTCAGAC
ACCWCTGGGTTASAG

Original motif     Consensus sequence: GACAGAGGGTCAGAC Reverse complement motif     Consensus sequence: GTCTGACCCTCTGTC


Dataset #: 2 Motif ID: 93 Motif name: Motif 93

Original motif     Consensus sequence: AGCTGGCACGAGGTG Reverse complement motif     Consensus sequence: CACCTCGTGCCAGCT

Best Matches for Motif ID 93 (Highest to Lowest)

Dataset #: 4
Motif ID: 176
Motif name: Motif 176
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 15
Similarity score: 0.0934271

Alignment:
AGATGGCGCTATWHM
AGCTGGCACGAGGTG

Original motif     Consensus sequence: AGATGGCGCTATWHM Reverse complement motif     Consensus sequence: RDWATAGCGCCATCT


Dataset #: 2 Motif ID: 94 Motif name: Motif 94

Original motif     Consensus sequence: AGTCGTTATAACA Reverse complement motif     Consensus sequence: TGTTATAACGACT

Best Matches for Motif ID 94 (Highest to Lowest)

Dataset #: 1
Motif ID: 33
Motif name: Motif 33
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 13
Similarity score: 0.0858875

Alignment:
GGTCATTAAAAATCC
AGTCGTTATAACA--

Original motif     Consensus sequence: GGTCATTAAAAATCC Reverse complement motif     Consensus sequence: GGATTTTTAATGACC


Dataset #: 2 Motif ID: 95 Motif name: Motif 95

Original motif     Consensus sequence: CCTCGCGTGGC Reverse complement motif     Consensus sequence: GCCACGCGAGG

Best Matches for Motif ID 95 (Highest to Lowest)

Dataset #: 4
Motif ID: 226
Motif name: Motif 226
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0586187

Alignment:
SGCGACGCGACG
-GCCACGCGAGG

Original motif     Consensus sequence: CGTCGCGTCGCS Reverse complement motif     Consensus sequence: SGCGACGCGACG


Dataset #: 2 Motif ID: 96 Motif name: Motif 96

Original motif     Consensus sequence: YGDTTTCCK Reverse complement motif     Consensus sequence: RGGAAAHCK

Best Matches for Motif ID 96 (Highest to Lowest)

Dataset #: 1
Motif ID: 49
Motif name: Motif 49
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 9
Similarity score: 0.00857748

Alignment:
SGGTTTCCKCC
--YGDTTTCCK

Original motif     Consensus sequence: GGRGGAAACCS Reverse complement motif     Consensus sequence: SGGTTTCCKCC


Dataset #: 2 Motif ID: 97 Motif name: Motif 97

Original motif     Consensus sequence: CGTGGGAA Reverse complement motif     Consensus sequence: TTCCCACG

Best Matches for Motif ID 97 (Highest to Lowest)

Dataset #: 1
Motif ID: 16
Motif name: Motif 16
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0370023

Alignment:
GAGACCACATGGGAA
-------CGTGGGAA

Original motif     Consensus sequence: GAGACCACATGGGAA Reverse complement motif     Consensus sequence: TTCCCATGTGGTCTC


Dataset #: 2 Motif ID: 98 Motif name: Motif 98

Original motif     Consensus sequence: ATGACGCA Reverse complement motif     Consensus sequence: TGCGTCAT

Best Matches for Motif ID 98 (Highest to Lowest)

Dataset #: 3
Motif ID: 143
Motif name: Motif 143
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.03499

Alignment:
DSTACGTCAK
--TGCGTCAT

Original motif     Consensus sequence: RTGACGTASD Reverse complement motif     Consensus sequence: DSTACGTCAK


Dataset #: 2 Motif ID: 99 Motif name: Motif 99

Original motif     Consensus sequence: AACTTACTTTAT Reverse complement motif     Consensus sequence: ATAAAGTAAGTT

Best Matches for Motif ID 99 (Highest to Lowest)

Dataset #: 3
Motif ID: 160
Motif name: Motif 160
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.0587388

Alignment:
AACTAGCTTATT
AACTTACTTTAT

Original motif     Consensus sequence: AATAAGCTAGTT Reverse complement motif     Consensus sequence: AACTAGCTTATT


Dataset #: 2 Motif ID: 100 Motif name: Motif 100

Original motif     Consensus sequence: ACAAAGCAAA Reverse complement motif     Consensus sequence: TTTGCTTTGT

Best Matches for Motif ID 100 (Highest to Lowest)

Dataset #: 1
Motif ID: 58
Motif name: Motif 58
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 10
Similarity score: 0.0590067

Alignment:
TACAAAGGGAGAA
-ACAAAGCAAA--

Original motif     Consensus sequence: TACAAAGGGAGAA Reverse complement motif     Consensus sequence: TTCTCCCTTTGTA


Dataset #: 2 Motif ID: 101 Motif name: Motif 101

Original motif     Consensus sequence: ACAATAGA Reverse complement motif     Consensus sequence: TCTATTGT

Best Matches for Motif ID 101 (Highest to Lowest)

Dataset #: 3
Motif ID: 124
Motif name: Motif 124
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 8
Similarity score: 0.0261863

Alignment:
AACAATRGV
-ACAATAGA

Original motif     Consensus sequence: AACAATRGV Reverse complement motif     Consensus sequence: VCKATTGTT


Dataset #: 2 Motif ID: 102 Motif name: Motif 102

Original motif     Consensus sequence: GCCTTGAACCC Reverse complement motif     Consensus sequence: GGGTTCAAGGC

Best Matches for Motif ID 102 (Highest to Lowest)

Dataset #: 1
Motif ID: 11
Motif name: Motif 11
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0244225

Alignment:
GCTGGTTCGAGYC
GGGTTCAAGGC--

Original motif     Consensus sequence: GCTGGTTCGAGYC Reverse complement motif     Consensus sequence: GKCTCGAACCAGC


Dataset #: 2 Motif ID: 103 Motif name: Motif 103

Original motif     Consensus sequence: GGAGAGAA Reverse complement motif     Consensus sequence: TTCTCTCC

Best Matches for Motif ID 103 (Highest to Lowest)

Dataset #: 1
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 5
Number of overlap: 8
Similarity score: 0.043917

Alignment:
AGAGAGAGAGAGAGA
----GGAGAGAA---

Original motif     Consensus sequence: AGAGAGAGAGAGAGA Reverse complement motif     Consensus sequence: TCTCTCTCTCTCTCT


Dataset #: 2 Motif ID: 104 Motif name: Motif 104

Original motif     Consensus sequence: GCTGCTACCATTGT Reverse complement motif     Consensus sequence: ACAATGGTAGCAGC

Best Matches for Motif ID 104 (Highest to Lowest)

Dataset #: 1
Motif ID: 57
Motif name: Motif 57
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 14
Similarity score: 0.0955398

Alignment:
CCAAGTGGATGCTGC
-ACAATGGTAGCAGC

Original motif     Consensus sequence: GCAGCATCCACTTGG Reverse complement motif     Consensus sequence: CCAAGTGGATGCTGC


Dataset #: 2 Motif ID: 105 Motif name: Motif 105

Original motif     Consensus sequence: AAGGACACATACGCC Reverse complement motif     Consensus sequence: GGCGTATGTGTCCTT

Best Matches for Motif ID 105 (Highest to Lowest)

Dataset #: 1
Motif ID: 16
Motif name: Motif 16
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 15
Similarity score: 0.100056

Alignment:
GAGACCACATGGGAA
AAGGACACATACGCC

Original motif     Consensus sequence: GAGACCACATGGGAA Reverse complement motif     Consensus sequence: TTCCCATGTGGTCTC


Dataset #: 2 Motif ID: 106 Motif name: Motif 106

Original motif     Consensus sequence: CAACCCATTAGTG Reverse complement motif     Consensus sequence: CACTAATGGGTTG

Best Matches for Motif ID 106 (Highest to Lowest)

Dataset #: 3
Motif ID: 114
Motif name: Motif 114
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 13
Similarity score: 0.0799807

Alignment:
VCTCTGATTGGKKKM
-CACTAATGGGTTG-

Original motif     Consensus sequence: YYRRCCAATCAGAGV Reverse complement motif     Consensus sequence: VCTCTGATTGGKKKM


Dataset #: 2 Motif ID: 107 Motif name: Motif 107

Original motif     Consensus sequence: TAGAACGCGCAWCT Reverse complement motif     Consensus sequence: AGWTGCGCGTTCTA

Best Matches for Motif ID 107 (Highest to Lowest)

Dataset #: 4
Motif ID: 206
Motif name: Motif 206
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 14
Similarity score: 0.0851319

Alignment:
CCTGGATCCGCCMCT
-TAGAACGCGCAWCT

Original motif     Consensus sequence: CCTGGATCCGCCMCT Reverse complement motif     Consensus sequence: AGYGGCGGATCCAGG


Dataset #: 2 Motif ID: 108 Motif name: Motif 108

Original motif     Consensus sequence: CCATCTTACCYCM Reverse complement motif     Consensus sequence: YGKGGTAAGATGG

Best Matches for Motif ID 108 (Highest to Lowest)

Dataset #: 3
Motif ID: 159
Motif name: Motif 159
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 13
Similarity score: 0.0878091

Alignment:
CGATGTMAGACGT
YGKGGTAAGATGG

Original motif     Consensus sequence: ACGTCTYACATCG Reverse complement motif     Consensus sequence: CGATGTMAGACGT


Dataset #: 2 Motif ID: 109 Motif name: Motif 109

Original motif     Consensus sequence: ACGCTTCAGTG Reverse complement motif     Consensus sequence: CACTGAAGCGT

Best Matches for Motif ID 109 (Highest to Lowest)

Dataset #: 4
Motif ID: 217
Motif name: Motif 217
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.06341

Alignment:
CGTGGACTGATACGT
----CACTGAAGCGT

Original motif     Consensus sequence: CGTGGACTGATACGT Reverse complement motif     Consensus sequence: ACGTATCAGTCCACG


Dataset #: 2 Motif ID: 110 Motif name: Motif 110

Original motif     Consensus sequence: TATWWATA Reverse complement motif     Consensus sequence: TATWWATA

Best Matches for Motif ID 110 (Highest to Lowest)

Dataset #: 3
Motif ID: 133
Motif name: Motif 133
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0297713

Alignment:
DVTACWWGTABH
--TATWWATA--

Original motif     Consensus sequence: DVTACWWGTABH Reverse complement motif     Consensus sequence: HBTACWWGTAVD


Dataset #: 2 Motif ID: 111 Motif name: Motif 111

Original motif     Consensus sequence: CAGTGTTGCC Reverse complement motif     Consensus sequence: GGCAACACTG

Best Matches for Motif ID 111 (Highest to Lowest)

Dataset #: 2
Motif ID: 108
Motif name: Motif 108
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0792214

Alignment:
YGKGGTAAGATGG
---GGCAACACTG

Original motif     Consensus sequence: CCATCTTACCYCM Reverse complement motif     Consensus sequence: YGKGGTAAGATGG


Dataset #: 2 Motif ID: 112 Motif name: Motif 112

Original motif     Consensus sequence: CAACAACAACAACAA Reverse complement motif     Consensus sequence: TTGTTGTTGTTGTTG

Best Matches for Motif ID 112 (Highest to Lowest)

Dataset #: 4
Motif ID: 174
Motif name: Motif 174
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 15
Similarity score: 0.0861691

Alignment:
TTMTTKTTMTTCTTC
TTGTTGTTGTTGTTG

Original motif     Consensus sequence: GAAGAARAARAARAA Reverse complement motif     Consensus sequence: TTMTTKTTMTTCTTC


Dataset #: 2 Motif ID: 113 Motif name: Motif 113

Original motif     Consensus sequence: GCAAGACACTTAAC Reverse complement motif     Consensus sequence: GTTAAGTGTCTTGC

Best Matches for Motif ID 113 (Highest to Lowest)

Dataset #: 1
Motif ID: 68
Motif name: Motif 68
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0998642

Alignment:
TCATGGCCCTTTAA
GCAAGACACTTAAC

Original motif     Consensus sequence: TCATGGCCCTTTAA Reverse complement motif     Consensus sequence: TTAAAGGGCCATGA


Dataset #: 3 Motif ID: 114 Motif name: Motif 114

Original motif     Consensus sequence: YYRRCCAATCAGAGV Reverse complement motif     Consensus sequence: VCTCTGATTGGKKKM

Best Matches for Motif ID 114 (Highest to Lowest)

Dataset #: 1
Motif ID: 24
Motif name: Motif 24
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 15
Similarity score: 0.110048

Alignment:
CAGTCCAAAGACATG
YYRRCCAATCAGAGV

Original motif     Consensus sequence: CAGTCCAAAGACATG Reverse complement motif     Consensus sequence: CATGTCTTTGGACTG


Dataset #: 3 Motif ID: 115 Motif name: Motif 115

Original motif     Consensus sequence: RGGTCARAGGTCA Reverse complement motif     Consensus sequence: TGACCTKTGACCK

Best Matches for Motif ID 115 (Highest to Lowest)

Dataset #: 1
Motif ID: 24
Motif name: Motif 24
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 3
Number of overlap: 13
Similarity score: 0.0867074

Alignment:
CATGTCTTTGGACTG
--TGACCTKTGACCK

Original motif     Consensus sequence: CAGTCCAAAGACATG Reverse complement motif     Consensus sequence: CATGTCTTTGGACTG


Dataset #: 3 Motif ID: 116 Motif name: Motif 116

Original motif     Consensus sequence: HCAAVATGGCGGCBV Reverse complement motif     Consensus sequence: VBGCCGCCATVTTGD

Best Matches for Motif ID 116 (Highest to Lowest)

Dataset #: 4
Motif ID: 177
Motif name: Motif 177
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 15
Similarity score: 0.0882342

Alignment:
CBSCVSMGCKSBGSVG
VBGCCGCCATVTTGD-

Original motif     Consensus sequence: CVSCBSRGCYSVGSBG Reverse complement motif     Consensus sequence: CBSCVSMGCKSBGSVG


Dataset #: 3 Motif ID: 117 Motif name: Motif 117

Original motif     Consensus sequence: BBRTGACGTCAYVV Reverse complement motif     Consensus sequence: VVMTGACGTCAKBB

Best Matches for Motif ID 117 (Highest to Lowest)

Dataset #: 2
Motif ID: 69
Motif name: Motif 69
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0257568

Alignment:
TTRTGACGTCAYAA
BBRTGACGTCAYVV

Original motif     Consensus sequence: TTRTGACGTCAYAA Reverse complement motif     Consensus sequence: TTKTGACGTCAMAA


Dataset #: 3 Motif ID: 118 Motif name: Motif 118

Original motif     Consensus sequence: CCCCTCCCCCY Reverse complement motif     Consensus sequence: KGGGGGAGGGG

Best Matches for Motif ID 118 (Highest to Lowest)

Dataset #: 4
Motif ID: 172
Motif name: Motif 172
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.0384794

Alignment:
CCCYCYCYCYCYCY
-CCCCTCCCCCY--

Original motif     Consensus sequence: CCCYCYCYCYCYCY Reverse complement motif     Consensus sequence: KGMGKGKGKGKGGG


Dataset #: 3 Motif ID: 119 Motif name: Motif 119

Original motif     Consensus sequence: ATTTGCATAWHA Reverse complement motif     Consensus sequence: TDWTATGCAAAT

Best Matches for Motif ID 119 (Highest to Lowest)

Dataset #: 4
Motif ID: 197
Motif name: Motif 197
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 12
Similarity score: 0.0907483

Alignment:
TGATGATGATGATG
-TDWTATGCAAAT-

Original motif     Consensus sequence: CATCATCATCATCA Reverse complement motif     Consensus sequence: TGATGATGATGATG


Dataset #: 3 Motif ID: 120 Motif name: Motif 120

Original motif     Consensus sequence: GCATGMTGGGA Reverse complement motif     Consensus sequence: TCCCARCATGC

Best Matches for Motif ID 120 (Highest to Lowest)

Dataset #: 2
Motif ID: 73
Motif name: Motif 73
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.0687336

Alignment:
CGCCAYCTHGCG
-TCCCARCATGC

Original motif     Consensus sequence: CGCCAYCTHGCG Reverse complement motif     Consensus sequence: CGCHAGMTGGCG


Dataset #: 3 Motif ID: 121 Motif name: Motif 121

Original motif     Consensus sequence: GTCACGTGAC Reverse complement motif     Consensus sequence: GTCACGTGAC

Best Matches for Motif ID 121 (Highest to Lowest)

Dataset #: 2
Motif ID: 72
Motif name: Motif 72
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.00943878

Alignment:
RRTCACGTGAYY
-GTCACGTGAC-

Original motif     Consensus sequence: RRTCACGTGAYY Reverse complement motif     Consensus sequence: KKTCACGTGAMM


Dataset #: 3 Motif ID: 122 Motif name: Motif 122

Original motif     Consensus sequence: CCGGAAGTRA Reverse complement motif     Consensus sequence: TMACTTCCGG

Best Matches for Motif ID 122 (Highest to Lowest)

Dataset #: 1
Motif ID: 40
Motif name: Motif 40
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0419079

Alignment:
CTGGAAGGGCAT
--CCGGAAGTRA

Original motif     Consensus sequence: ATGCCCTTCCAG Reverse complement motif     Consensus sequence: CTGGAAGGGCAT


Dataset #: 3 Motif ID: 123 Motif name: Motif 123

Original motif     Consensus sequence: CATCTGCTTGGAGA Reverse complement motif     Consensus sequence: TCTCCAAGCAGATG

Best Matches for Motif ID 123 (Highest to Lowest)

Dataset #: 1
Motif ID: 24
Motif name: Motif 24
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 14
Similarity score: 0.0781869

Alignment:
CAGTCCAAAGACATG
TCTCCAAGCAGATG-

Original motif     Consensus sequence: CAGTCCAAAGACATG Reverse complement motif     Consensus sequence: CATGTCTTTGGACTG


Dataset #: 3 Motif ID: 124 Motif name: Motif 124

Original motif     Consensus sequence: AACAATRGV Reverse complement motif     Consensus sequence: VCKATTGTT

Best Matches for Motif ID 124 (Highest to Lowest)

Dataset #: 2
Motif ID: 71
Motif name: Motif 71
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 9
Similarity score: 0.0253549

Alignment:
AAACAAWGGV
-AACAATRGV

Original motif     Consensus sequence: AAACAAWGGV Reverse complement motif     Consensus sequence: BCCWTTGTTT


Dataset #: 3 Motif ID: 125 Motif name: Motif 125

Original motif     Consensus sequence: CGCATGCGCASTVS Reverse complement motif     Consensus sequence: SVASTGCGCATGCG

Best Matches for Motif ID 125 (Highest to Lowest)

Dataset #: 4
Motif ID: 175
Motif name: Motif 175
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0883451

Alignment:
CACACACACACACA
CGCATGCGCASTVS

Original motif     Consensus sequence: CACACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTGTG


Dataset #: 3 Motif ID: 126 Motif name: Motif 126

Original motif     Consensus sequence: RVTCTCGCGAGABY Reverse complement motif     Consensus sequence: MVTCTCGCGAGABK

Best Matches for Motif ID 126 (Highest to Lowest)

Dataset #: 1
Motif ID: 42
Motif name: Motif 42
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0513504

Alignment:
AATTTGGCCAGGAC
RVTCTCGCGAGABY

Original motif     Consensus sequence: AATTTGGCCAGGAC Reverse complement motif     Consensus sequence: GTCCTGGCCAAATT


Dataset #: 3 Motif ID: 127 Motif name: Motif 127

Original motif     Consensus sequence: AACAACAACA Reverse complement motif     Consensus sequence: TGTTGTTGTT

Best Matches for Motif ID 127 (Highest to Lowest)

Dataset #: 2
Motif ID: 112
Motif name: Motif 112
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 5
Number of overlap: 10
Similarity score: 0.0124598

Alignment:
TTGTTGTTGTTGTTG
-TGTTGTTGTT----

Original motif     Consensus sequence: CAACAACAACAACAA Reverse complement motif     Consensus sequence: TTGTTGTTGTTGTTG


Dataset #: 3 Motif ID: 128 Motif name: Motif 128

Original motif     Consensus sequence: CCATGGCAACVG Reverse complement motif     Consensus sequence: CVGTTGCCATGG

Best Matches for Motif ID 128 (Highest to Lowest)

Dataset #: 2
Motif ID: 89
Motif name: Motif 89
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 12
Similarity score: 0.0775896

Alignment:
TACATGGTAACTCG
-CCATGGCAACVG-

Original motif     Consensus sequence: CGAGTTACCATGTA Reverse complement motif     Consensus sequence: TACATGGTAACTCG


Dataset #: 3 Motif ID: 129 Motif name: Motif 129

Original motif     Consensus sequence: TCCCGCCVW Reverse complement motif     Consensus sequence: WBGGCGGGA

Best Matches for Motif ID 129 (Highest to Lowest)

Dataset #: 1
Motif ID: 47
Motif name: Motif 47
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 9
Similarity score: 0.0444397

Alignment:
TGGGCGRGGC
WBGGCGGGA-

Original motif     Consensus sequence: GCCMCGCCCA Reverse complement motif     Consensus sequence: TGGGCGRGGC


Dataset #: 3 Motif ID: 130 Motif name: Motif 130

Original motif     Consensus sequence: AGGTGTGAAAWV Reverse complement motif     Consensus sequence: BWTTTCACACCT

Best Matches for Motif ID 130 (Highest to Lowest)

Dataset #: 3
Motif ID: 137
Motif name: Motif 137
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.054079

Alignment:
HDTTTCCCGCCA
BWTTTCACACCT

Original motif     Consensus sequence: TGGCGGGAAADH Reverse complement motif     Consensus sequence: HDTTTCCCGCCA


Dataset #: 3 Motif ID: 131 Motif name: Motif 131

Original motif     Consensus sequence: GMTAATTA Reverse complement motif     Consensus sequence: TAATTAYC

Best Matches for Motif ID 131 (Highest to Lowest)

Dataset #: 1
Motif ID: 6
Motif name: Motif 6
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0298794

Alignment:
ATGCWAATGA
--GMTAATTA

Original motif     Consensus sequence: ATGCWAATGA Reverse complement motif     Consensus sequence: TCATTWGCAT


Dataset #: 3 Motif ID: 132 Motif name: Motif 132

Original motif     Consensus sequence: CCAWATWTGG Reverse complement motif     Consensus sequence: CCAWATWTGG

Best Matches for Motif ID 132 (Highest to Lowest)

Dataset #: 1
Motif ID: 16
Motif name: Motif 16
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.0612849

Alignment:
TTCCCATGTGGTCTC
-CCAWATWTGG----

Original motif     Consensus sequence: GAGACCACATGGGAA Reverse complement motif     Consensus sequence: TTCCCATGTGGTCTC


Dataset #: 3 Motif ID: 133 Motif name: Motif 133

Original motif     Consensus sequence: DVTACWWGTABH Reverse complement motif     Consensus sequence: HBTACWWGTAVD

Best Matches for Motif ID 133 (Highest to Lowest)

Dataset #: 4
Motif ID: 173
Motif name: Motif 173
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.0254414

Alignment:
DBTAGKMCTAVH
HBTACWWGTAVD

Original motif     Consensus sequence: HVTAGRYCTABD Reverse complement motif     Consensus sequence: DBTAGKMCTAVH


Dataset #: 3 Motif ID: 134 Motif name: Motif 134

Original motif     Consensus sequence: GGCCACGCCC Reverse complement motif     Consensus sequence: GGGCGTGGCC

Best Matches for Motif ID 134 (Highest to Lowest)

Dataset #: 1
Motif ID: 25
Motif name: Motif 25
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0512

Alignment:
AGCAGGGCTGMGCC
GGGCGTGGCC----

Original motif     Consensus sequence: AGCAGGGCTGMGCC Reverse complement motif     Consensus sequence: GGCYCAGCCCTGCT


Dataset #: 3 Motif ID: 135 Motif name: Motif 135

Original motif     Consensus sequence: ACCAAGGAGGTTA Reverse complement motif     Consensus sequence: TAACCTCCTTGGT

Best Matches for Motif ID 135 (Highest to Lowest)

Dataset #: 3
Motif ID: 116
Motif name: Motif 116
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 13
Similarity score: 0.092124

Alignment:
VBGCCGCCATVTTGD
TAACCTCCTTGGT--

Original motif     Consensus sequence: HCAAVATGGCGGCBV Reverse complement motif     Consensus sequence: VBGCCGCCATVTTGD


Dataset #: 3 Motif ID: 136 Motif name: Motif 136

Original motif     Consensus sequence: CCCTCCCC Reverse complement motif     Consensus sequence: GGGGAGGG

Best Matches for Motif ID 136 (Highest to Lowest)

Dataset #: 3
Motif ID: 118
Motif name: Motif 118
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 8
Similarity score: 0.0158026

Alignment:
KGGGGGAGGGG
--GGGGAGGG-

Original motif     Consensus sequence: CCCCTCCCCCY Reverse complement motif     Consensus sequence: KGGGGGAGGGG


Dataset #: 3 Motif ID: 137 Motif name: Motif 137

Original motif     Consensus sequence: TGGCGGGAAADH Reverse complement motif     Consensus sequence: HDTTTCCCGCCA

Best Matches for Motif ID 137 (Highest to Lowest)

Dataset #: 3
Motif ID: 130
Motif name: Motif 130
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.0522144

Alignment:
BWTTTCACACCT
HDTTTCCCGCCA

Original motif     Consensus sequence: AGGTGTGAAAWV Reverse complement motif     Consensus sequence: BWTTTCACACCT


Dataset #: 3 Motif ID: 138 Motif name: Motif 138

Original motif     Consensus sequence: CTCATGAATAWTYA Reverse complement motif     Consensus sequence: TMAWTATTCATGAG

Best Matches for Motif ID 138 (Highest to Lowest)

Dataset #: 1
Motif ID: 33
Motif name: Motif 33
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 14
Similarity score: 0.0706921

Alignment:
GGTCATTAAAAATCC
-CTCATGAATAWTYA

Original motif     Consensus sequence: GGTCATTAAAAATCC Reverse complement motif     Consensus sequence: GGATTTTTAATGACC


Dataset #: 3 Motif ID: 139 Motif name: Motif 139

Original motif     Consensus sequence: CTGTCAATCAC Reverse complement motif     Consensus sequence: GTGATTGACAG

Best Matches for Motif ID 139 (Highest to Lowest)

Dataset #: 1
Motif ID: 2
Motif name: Motif 2
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0746225

Alignment:
CARCCAATCAGA
CTGTCAATCAC-

Original motif     Consensus sequence: CARCCAATCAGA Reverse complement motif     Consensus sequence: TCTGATTGGMTG


Dataset #: 3 Motif ID: 140 Motif name: Motif 140

Original motif     Consensus sequence: CAGGTAAG Reverse complement motif     Consensus sequence: CTTACCTG

Best Matches for Motif ID 140 (Highest to Lowest)

Dataset #: 4
Motif ID: 199
Motif name: Motif 199
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.031046

Alignment:
CTGAGCTGAG
CTTACCTG--

Original motif     Consensus sequence: CTCAGCTCAG Reverse complement motif     Consensus sequence: CTGAGCTGAG


Dataset #: 3 Motif ID: 141 Motif name: Motif 141

Original motif     Consensus sequence: AGCGCCVCCTR Reverse complement motif     Consensus sequence: KAGGVGGCGCT

Best Matches for Motif ID 141 (Highest to Lowest)

Dataset #: 2
Motif ID: 107
Motif name: Motif 107
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 11
Similarity score: 0.0838452

Alignment:
AGWTGCGCGTTCTA
AGCGCCVCCTR---

Original motif     Consensus sequence: TAGAACGCGCAWCT Reverse complement motif     Consensus sequence: AGWTGCGCGTTCTA


Dataset #: 3 Motif ID: 142 Motif name: Motif 142

Original motif     Consensus sequence: CCTGGGAACGAGA Reverse complement motif     Consensus sequence: TCTCGTTCCCAGG

Best Matches for Motif ID 142 (Highest to Lowest)

Dataset #: 4
Motif ID: 206
Motif name: Motif 206
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 13
Similarity score: 0.0781597

Alignment:
AGYGGCGGATCCAGG
--TCTCGTTCCCAGG

Original motif     Consensus sequence: CCTGGATCCGCCMCT Reverse complement motif     Consensus sequence: AGYGGCGGATCCAGG


Dataset #: 3 Motif ID: 143 Motif name: Motif 143

Original motif     Consensus sequence: RTGACGTASD Reverse complement motif     Consensus sequence: DSTACGTCAK

Best Matches for Motif ID 143 (Highest to Lowest)

Dataset #: 2
Motif ID: 77
Motif name: Motif 77
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 10
Similarity score: 0.0331237

Alignment:
VTGACGTCAB
RTGACGTASD

Original motif     Consensus sequence: VTGACGTCAB Reverse complement motif     Consensus sequence: VTGACGTCAB


Dataset #: 3 Motif ID: 144 Motif name: Motif 144

Original motif     Consensus sequence: CCCACAATGC Reverse complement motif     Consensus sequence: GCATTGTGGG

Best Matches for Motif ID 144 (Highest to Lowest)

Dataset #: 3
Motif ID: 120
Motif name: Motif 120
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.0446468

Alignment:
TCCCARCATGC
CCCACAATGC-

Original motif     Consensus sequence: GCATGMTGGGA Reverse complement motif     Consensus sequence: TCCCARCATGC


Dataset #: 3 Motif ID: 145 Motif name: Motif 145

Original motif     Consensus sequence: AAACAAAACAA Reverse complement motif     Consensus sequence: TTGTTTTGTTT

Best Matches for Motif ID 145 (Highest to Lowest)

Dataset #: 1
Motif ID: 20
Motif name: Motif 20
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 4
Number of overlap: 11
Similarity score: 0.0306777

Alignment:
TTBTTTTTTTTTTT
TTGTTTTGTTT---

Original motif     Consensus sequence: AAAAAAAAAAAVAA Reverse complement motif     Consensus sequence: TTBTTTTTTTTTTT


Dataset #: 3 Motif ID: 146 Motif name: Motif 146

Original motif     Consensus sequence: AAGACAACA Reverse complement motif     Consensus sequence: TGTTGTCTT

Best Matches for Motif ID 146 (Highest to Lowest)

Dataset #: 1
Motif ID: 16
Motif name: Motif 16
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 9
Similarity score: 0.0564308

Alignment:
TTCCCATGTGGTCTC
------TGTTGTCTT

Original motif     Consensus sequence: GAGACCACATGGGAA Reverse complement motif     Consensus sequence: TTCCCATGTGGTCTC


Dataset #: 3 Motif ID: 147 Motif name: Motif 147

Original motif     Consensus sequence: ACATCCGGGDMMT Reverse complement motif     Consensus sequence: ARRDCCCGGATGT

Best Matches for Motif ID 147 (Highest to Lowest)

Dataset #: 1
Motif ID: 15
Motif name: Motif 15
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 13
Similarity score: 0.0424838

Alignment:
CAGTACCTGGATGG
ARRDCCCGGATGT-

Original motif     Consensus sequence: CAGTACCTGGATGG Reverse complement motif     Consensus sequence: CCATCCAGGTACTG


Dataset #: 3 Motif ID: 148 Motif name: Motif 148

Original motif     Consensus sequence: AAAAYAAACAA Reverse complement motif     Consensus sequence: TTGTTTKTTTT

Best Matches for Motif ID 148 (Highest to Lowest)

Dataset #: 3
Motif ID: 145
Motif name: Motif 145
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0447101

Alignment:
TTGTTTTGTTT
TTGTTTKTTTT

Original motif     Consensus sequence: AAACAAAACAA Reverse complement motif     Consensus sequence: TTGTTTTGTTT


Dataset #: 3 Motif ID: 149 Motif name: Motif 149

Original motif     Consensus sequence: AATACACATCY Reverse complement motif     Consensus sequence: MGATGTGTATT

Best Matches for Motif ID 149 (Highest to Lowest)

Dataset #: 2
Motif ID: 105
Motif name: Motif 105
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 11
Similarity score: 0.0726877

Alignment:
AAGGACACATACGCC
-AATACACATCY---

Original motif     Consensus sequence: AAGGACACATACGCC Reverse complement motif     Consensus sequence: GGCGTATGTGTCCTT


Dataset #: 3 Motif ID: 150 Motif name: Motif 150

Original motif     Consensus sequence: AAGGTAAACA Reverse complement motif     Consensus sequence: TGTTTACCTT

Best Matches for Motif ID 150 (Highest to Lowest)

Dataset #: 3
Motif ID: 145
Motif name: Motif 145
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.0630878

Alignment:
TTGTTTTGTTT
-TGTTTACCTT

Original motif     Consensus sequence: AAACAAAACAA Reverse complement motif     Consensus sequence: TTGTTTTGTTT


Dataset #: 3 Motif ID: 151 Motif name: Motif 151

Original motif     Consensus sequence: CGCCGCCA Reverse complement motif     Consensus sequence: TGGCGGCG

Best Matches for Motif ID 151 (Highest to Lowest)

Dataset #: 4
Motif ID: 189
Motif name: Motif 189
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 8
Similarity score: 0.0373665

Alignment:
BGTCGCCATTTT
CGCCGCCA----

Original motif     Consensus sequence: AAAATGGCGACB Reverse complement motif     Consensus sequence: BGTCGCCATTTT


Dataset #: 3 Motif ID: 152 Motif name: Motif 152

Original motif     Consensus sequence: GAAGAAGAA Reverse complement motif     Consensus sequence: TTCTTCTTC

Best Matches for Motif ID 152 (Highest to Lowest)

Dataset #: 4
Motif ID: 174
Motif name: Motif 174
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 7
Number of overlap: 9
Similarity score: 0.0234613

Alignment:
GAAGAARAARAARAA
GAAGAAGAA------

Original motif     Consensus sequence: GAAGAARAARAARAA Reverse complement motif     Consensus sequence: TTMTTKTTMTTCTTC


Dataset #: 3 Motif ID: 153 Motif name: Motif 153

Original motif     Consensus sequence: GCCTGGTAGAGGCTA Reverse complement motif     Consensus sequence: TAGCCTCTACCAGGC

Best Matches for Motif ID 153 (Highest to Lowest)

Dataset #: 1
Motif ID: 21
Motif name: Motif 21
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 15
Similarity score: 0.0897999

Alignment:
CAAACTCCACACAGA
TAGCCTCTACCAGGC

Original motif     Consensus sequence: CAAACTCCACACAGA Reverse complement motif     Consensus sequence: TCTGTGTGGAGTTTG


Dataset #: 3 Motif ID: 154 Motif name: Motif 154

Original motif     Consensus sequence: AGACAATGTCGAG Reverse complement motif     Consensus sequence: CTCGACATTGTCT

Best Matches for Motif ID 154 (Highest to Lowest)

Dataset #: 4
Motif ID: 197
Motif name: Motif 197
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 13
Similarity score: 0.104359

Alignment:
CATCATCATCATCA
-CTCGACATTGTCT

Original motif     Consensus sequence: CATCATCATCATCA Reverse complement motif     Consensus sequence: TGATGATGATGATG


Dataset #: 3 Motif ID: 155 Motif name: Motif 155

Original motif     Consensus sequence: TCACGTGACC Reverse complement motif     Consensus sequence: GGTCACGTGA

Best Matches for Motif ID 155 (Highest to Lowest)

Dataset #: 2
Motif ID: 72
Motif name: Motif 72
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0259584

Alignment:
RRTCACGTGAYY
--TCACGTGACC

Original motif     Consensus sequence: RRTCACGTGAYY Reverse complement motif     Consensus sequence: KKTCACGTGAMM


Dataset #: 3 Motif ID: 156 Motif name: Motif 156

Original motif     Consensus sequence: GACAGAGGGTCAGAC Reverse complement motif     Consensus sequence: GTCTGACCCTCTGTC

Best Matches for Motif ID 156 (Highest to Lowest)

Dataset #: 2
Motif ID: 92
Motif name: Motif 92
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 15
Similarity score: 0.122026

Alignment:
ACCWCTGGGTTASAG
GACAGAGGGTCAGAC

Original motif     Consensus sequence: ACCWCTGGGTTASAG Reverse complement motif     Consensus sequence: CTSTAACCCAGWGGT


Dataset #: 3 Motif ID: 157 Motif name: Motif 157

Original motif     Consensus sequence: GCTCCGCCC Reverse complement motif     Consensus sequence: GGGCGGAGC

Best Matches for Motif ID 157 (Highest to Lowest)

Dataset #: 1
Motif ID: 25
Motif name: Motif 25
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 9
Similarity score: 0.0456054

Alignment:
GGCYCAGCCCTGCT
----GCTCCGCCC-

Original motif     Consensus sequence: AGCAGGGCTGMGCC Reverse complement motif     Consensus sequence: GGCYCAGCCCTGCT


Dataset #: 3 Motif ID: 158 Motif name: Motif 158

Original motif     Consensus sequence: CACACACACACAC Reverse complement motif     Consensus sequence: GTGTGTGTGTGTG

Best Matches for Motif ID 158 (Highest to Lowest)

Dataset #: 1
Motif ID: 1
Motif name: Motif 1
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 13
Similarity score: 0.00462972

Alignment:
GTGTGTGTGTGTGT
GTGTGTGTGTGTG-

Original motif     Consensus sequence: ACACACACACACAC Reverse complement motif     Consensus sequence: GTGTGTGTGTGTGT


Dataset #: 3 Motif ID: 159 Motif name: Motif 159

Original motif     Consensus sequence: ACGTCTYACATCG Reverse complement motif     Consensus sequence: CGATGTMAGACGT

Best Matches for Motif ID 159 (Highest to Lowest)

Dataset #: 1
Motif ID: 51
Motif name: Motif 51
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 13
Similarity score: 0.064168

Alignment:
CAACTCTCACATGG
-ACGTCTYACATCG

Original motif     Consensus sequence: CAACTCTCACATGG Reverse complement motif     Consensus sequence: CCATGTGAGAGTTG


Dataset #: 3 Motif ID: 160 Motif name: Motif 160

Original motif     Consensus sequence: AATAAGCTAGTT Reverse complement motif     Consensus sequence: AACTAGCTTATT

Best Matches for Motif ID 160 (Highest to Lowest)

Dataset #: 2
Motif ID: 99
Motif name: Motif 99
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.0694147

Alignment:
ATAAAGTAAGTT
AATAAGCTAGTT

Original motif     Consensus sequence: AACTTACTTTAT Reverse complement motif     Consensus sequence: ATAAAGTAAGTT


Dataset #: 3 Motif ID: 161 Motif name: Motif 161

Original motif     Consensus sequence: CAGACRAC Reverse complement motif     Consensus sequence: GTKGTCTG

Best Matches for Motif ID 161 (Highest to Lowest)

Dataset #: 4
Motif ID: 181
Motif name: Motif 181
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.00808352

Alignment:
AGCAGACGAC
--CAGACRAC

Original motif     Consensus sequence: AGCAGACGAC Reverse complement motif     Consensus sequence: GTCGTCTGCT


Dataset #: 3 Motif ID: 162 Motif name: Motif 162

Original motif     Consensus sequence: ATGATGATGATGAYR Reverse complement motif     Consensus sequence: MMTCATCATCATCAT

Best Matches for Motif ID 162 (Highest to Lowest)

Dataset #: 2
Motif ID: 112
Motif name: Motif 112
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 15
Similarity score: 0.0680803

Alignment:
TTGTTGTTGTTGTTG
ATGATGATGATGAYR

Original motif     Consensus sequence: CAACAACAACAACAA Reverse complement motif     Consensus sequence: TTGTTGTTGTTGTTG


Dataset #: 3 Motif ID: 163 Motif name: Motif 163

Original motif     Consensus sequence: ACAGGTGCA Reverse complement motif     Consensus sequence: TGCACCTGT

Best Matches for Motif ID 163 (Highest to Lowest)

Dataset #: 1
Motif ID: 28
Motif name: Motif 28
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 9
Similarity score: 0.0504309

Alignment:
TCCTAATGCCCCAGT
------TGCACCTGT

Original motif     Consensus sequence: ACTGGGGCATTAGGA Reverse complement motif     Consensus sequence: TCCTAATGCCCCAGT


Dataset #: 3 Motif ID: 164 Motif name: Motif 164

Original motif     Consensus sequence: GACCAATCA Reverse complement motif     Consensus sequence: TGATTGGTC

Best Matches for Motif ID 164 (Highest to Lowest)

Dataset #: 4
Motif ID: 213
Motif name: Motif 213
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 9
Similarity score: 0.00947921

Alignment:
TGATTGGTCAAW
TGATTGGTC---

Original motif     Consensus sequence: TGATTGGTCAAW Reverse complement motif     Consensus sequence: WTTGACCAATCA


Dataset #: 3 Motif ID: 165 Motif name: Motif 165

Original motif     Consensus sequence: AGCTGTTTTGG Reverse complement motif     Consensus sequence: CCAAAACAGCT

Best Matches for Motif ID 165 (Highest to Lowest)

Dataset #: 1
Motif ID: 38
Motif name: Motif 38
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 11
Similarity score: 0.0753602

Alignment:
CAACAACAACA
CCAAAACAGCT

Original motif     Consensus sequence: CAACAACAACA Reverse complement motif     Consensus sequence: TGTTGTTGTTG


Dataset #: 3 Motif ID: 166 Motif name: Motif 166

Original motif     Consensus sequence: CAGCCAATCA Reverse complement motif     Consensus sequence: TGATTGGCTG

Best Matches for Motif ID 166 (Highest to Lowest)

Dataset #: 1
Motif ID: 2
Motif name: Motif 2
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 10
Similarity score: 0.00337462

Alignment:
CARCCAATCAGA
CAGCCAATCA--

Original motif     Consensus sequence: CARCCAATCAGA Reverse complement motif     Consensus sequence: TCTGATTGGMTG


Dataset #: 3 Motif ID: 167 Motif name: Motif 167

Original motif     Consensus sequence: ATGCAAAT Reverse complement motif     Consensus sequence: ATTTGCAT

Best Matches for Motif ID 167 (Highest to Lowest)

Dataset #: 3
Motif ID: 119
Motif name: Motif 119
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0179844

Alignment:
ATTTGCATAWHA
----ATTTGCAT

Original motif     Consensus sequence: ATTTGCATAWHA Reverse complement motif     Consensus sequence: TDWTATGCAAAT


Dataset #: 3 Motif ID: 168 Motif name: Motif 168

Original motif     Consensus sequence: ATAGTAGAAWTYGGC Reverse complement motif     Consensus sequence: GCCKAWTTCTACTAT

Best Matches for Motif ID 168 (Highest to Lowest)

Dataset #: 1
Motif ID: 28
Motif name: Motif 28
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 15
Similarity score: 0.0949239

Alignment:
TCCTAATGCCCCAGT
GCCKAWTTCTACTAT

Original motif     Consensus sequence: ACTGGGGCATTAGGA Reverse complement motif     Consensus sequence: TCCTAATGCCCCAGT


Dataset #: 3 Motif ID: 169 Motif name: Motif 169

Original motif     Consensus sequence: HRCTGCAGYD Reverse complement motif     Consensus sequence: DMCTGCAGKH

Best Matches for Motif ID 169 (Highest to Lowest)

Dataset #: 4
Motif ID: 179
Motif name: Motif 179
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0436769

Alignment:
HGCACTGCACTG
--HRCTGCAGYD

Original motif     Consensus sequence: CAGTGCAGTGCH Reverse complement motif     Consensus sequence: HGCACTGCACTG


Dataset #: 3 Motif ID: 170 Motif name: Motif 170

Original motif     Consensus sequence: ACTGTTTACAAGC Reverse complement motif     Consensus sequence: GCTTGTAAACAGT

Best Matches for Motif ID 170 (Highest to Lowest)

Dataset #: 1
Motif ID: 60
Motif name: Motif 60
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 13
Similarity score: 0.0759154

Alignment:
GCTGTTTTAATGC
ACTGTTTACAAGC

Original motif     Consensus sequence: GCATTAAAACAGC Reverse complement motif     Consensus sequence: GCTGTTTTAATGC


Dataset #: 4 Motif ID: 171 Motif name: Motif 171

Original motif     Consensus sequence: VTACATGTAB Reverse complement motif     Consensus sequence: BTACATGTAV

Best Matches for Motif ID 171 (Highest to Lowest)

Dataset #: 3
Motif ID: 133
Motif name: Motif 133
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0

Alignment:
HBTACWWGTAVD
-BTACATGTAV-

Original motif     Consensus sequence: DVTACWWGTABH Reverse complement motif     Consensus sequence: HBTACWWGTAVD


Dataset #: 4 Motif ID: 172 Motif name: Motif 172

Original motif     Consensus sequence: CCCYCYCYCYCYCY Reverse complement motif     Consensus sequence: KGMGKGKGKGKGGG

Best Matches for Motif ID 172 (Highest to Lowest)

Dataset #: 4
Motif ID: 175
Motif name: Motif 175
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0350109

Alignment:
TGTGTGTGTGTGTG
KGMGKGKGKGKGGG

Original motif     Consensus sequence: CACACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTGTG


Dataset #: 4 Motif ID: 173 Motif name: Motif 173

Original motif     Consensus sequence: HVTAGRYCTABD Reverse complement motif     Consensus sequence: DBTAGKMCTAVH

Best Matches for Motif ID 173 (Highest to Lowest)

Dataset #: 3
Motif ID: 133
Motif name: Motif 133
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.0146041

Alignment:
HBTACWWGTAVD
DBTAGKMCTAVH

Original motif     Consensus sequence: DVTACWWGTABH Reverse complement motif     Consensus sequence: HBTACWWGTAVD


Dataset #: 4 Motif ID: 174 Motif name: Motif 174

Original motif     Consensus sequence: GAAGAARAARAARAA Reverse complement motif     Consensus sequence: TTMTTKTTMTTCTTC

Best Matches for Motif ID 174 (Highest to Lowest)

Dataset #: 2
Motif ID: 112
Motif name: Motif 112
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 15
Similarity score: 0.0574932

Alignment:
TTGTTGTTGTTGTTG
TTMTTKTTMTTCTTC

Original motif     Consensus sequence: CAACAACAACAACAA Reverse complement motif     Consensus sequence: TTGTTGTTGTTGTTG


Dataset #: 4 Motif ID: 175 Motif name: Motif 175

Original motif     Consensus sequence: CACACACACACACA Reverse complement motif     Consensus sequence: TGTGTGTGTGTGTG

Best Matches for Motif ID 175 (Highest to Lowest)

Dataset #: 4
Motif ID: 172
Motif name: Motif 172
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 14
Similarity score: 0.0593433

Alignment:
KGMGKGKGKGKGGG
TGTGTGTGTGTGTG

Original motif     Consensus sequence: CCCYCYCYCYCYCY Reverse complement motif     Consensus sequence: KGMGKGKGKGKGGG


Dataset #: 4 Motif ID: 176 Motif name: Motif 176

Original motif     Consensus sequence: AGATGGCGCTATWHM Reverse complement motif     Consensus sequence: RDWATAGCGCCATCT

Best Matches for Motif ID 176 (Highest to Lowest)

Dataset #: 2
Motif ID: 93
Motif name: Motif 93
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 15
Similarity score: 0.0840449

Alignment:
AGCTGGCACGAGGTG
AGATGGCGCTATWHM

Original motif     Consensus sequence: AGCTGGCACGAGGTG Reverse complement motif     Consensus sequence: CACCTCGTGCCAGCT


Dataset #: 4 Motif ID: 177 Motif name: Motif 177

Original motif     Consensus sequence: CVSCBSRGCYSVGSBG Reverse complement motif     Consensus sequence: CBSCVSMGCKSBGSVG

Best Matches for Motif ID 177 (Highest to Lowest)

Dataset #: 4
Motif ID: 176
Motif name: Motif 176
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 15
Similarity score: 0.0482769

Alignment:
RDWATAGCGCCATCT-
CVSCBSRGCYSVGSBG

Original motif     Consensus sequence: AGATGGCGCTATWHM Reverse complement motif     Consensus sequence: RDWATAGCGCCATCT


Dataset #: 4 Motif ID: 178 Motif name: Motif 178

Original motif     Consensus sequence: AGCTAGCTAGCBV Reverse complement motif     Consensus sequence: BBGCTAGCTAGCT

Best Matches for Motif ID 178 (Highest to Lowest)

Dataset #: 3
Motif ID: 126
Motif name: Motif 126
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 13
Similarity score: 0.0716299

Alignment:
MVTCTCGCGAGABK
BBGCTAGCTAGCT-

Original motif     Consensus sequence: RVTCTCGCGAGABY Reverse complement motif     Consensus sequence: MVTCTCGCGAGABK


Dataset #: 4 Motif ID: 179 Motif name: Motif 179

Original motif     Consensus sequence: CAGTGCAGTGCH Reverse complement motif     Consensus sequence: HGCACTGCACTG

Best Matches for Motif ID 179 (Highest to Lowest)

Dataset #: 1
Motif ID: 25
Motif name: Motif 25
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.0660856

Alignment:
AGCAGGGCTGMGCC
--CAGTGCAGTGCH

Original motif     Consensus sequence: AGCAGGGCTGMGCC Reverse complement motif     Consensus sequence: GGCYCAGCCCTGCT


Dataset #: 4 Motif ID: 180 Motif name: Motif 180

Original motif     Consensus sequence: TACRGTACA Reverse complement motif     Consensus sequence: TGTACKGTA

Best Matches for Motif ID 180 (Highest to Lowest)

Dataset #: 4
Motif ID: 218
Motif name: Motif 218
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 5
Number of overlap: 9
Similarity score: 0.0445604

Alignment:
TTGTACAGTGGTGT
-TGTACKGTA----

Original motif     Consensus sequence: ACACCACTGTACAA Reverse complement motif     Consensus sequence: TTGTACAGTGGTGT


Dataset #: 4 Motif ID: 181 Motif name: Motif 181

Original motif     Consensus sequence: AGCAGACGAC Reverse complement motif     Consensus sequence: GTCGTCTGCT

Best Matches for Motif ID 181 (Highest to Lowest)

Dataset #: 4
Motif ID: 217
Motif name: Motif 217
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 10
Similarity score: 0.0585592

Alignment:
CGTGGACTGATACGT
-GTCGTCTGCT----

Original motif     Consensus sequence: CGTGGACTGATACGT Reverse complement motif     Consensus sequence: ACGTATCAGTCCACG


Dataset #: 4 Motif ID: 182 Motif name: Motif 182

Original motif     Consensus sequence: CCATGCAC Reverse complement motif     Consensus sequence: GTGCATGG

Best Matches for Motif ID 182 (Highest to Lowest)

Dataset #: 1
Motif ID: 63
Motif name: Motif 63
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 7
Number of overlap: 8
Similarity score: 0.0320906

Alignment:
AAACACCCATACAC
------CCATGCAC

Original motif     Consensus sequence: AAACACCCATACAC Reverse complement motif     Consensus sequence: GTGTATGGGTGTTT


Dataset #: 4 Motif ID: 183 Motif name: Motif 183

Original motif     Consensus sequence: DATGACGTCATH Reverse complement motif     Consensus sequence: HATGACGTCATD

Best Matches for Motif ID 183 (Highest to Lowest)

Dataset #: 3
Motif ID: 117
Motif name: Motif 117
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 12
Similarity score: 0.00485916

Alignment:
BBRTGACGTCAYVV
-DATGACGTCATH-

Original motif     Consensus sequence: BBRTGACGTCAYVV Reverse complement motif     Consensus sequence: VVMTGACGTCAKBB


Dataset #: 4 Motif ID: 184 Motif name: Motif 184

Original motif     Consensus sequence: GTAAACAAA Reverse complement motif     Consensus sequence: TTTGTTTAC

Best Matches for Motif ID 184 (Highest to Lowest)

Dataset #: 3
Motif ID: 170
Motif name: Motif 170
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 5
Number of overlap: 9
Similarity score: 0.0527946

Alignment:
GCTTGTAAACAGT
GTAAACAAA----

Original motif     Consensus sequence: ACTGTTTACAAGC Reverse complement motif     Consensus sequence: GCTTGTAAACAGT


Dataset #: 4 Motif ID: 185 Motif name: Motif 185

Original motif     Consensus sequence: CCAGGCCAGGS Reverse complement motif     Consensus sequence: SCCTGGCCTGG

Best Matches for Motif ID 185 (Highest to Lowest)

Dataset #: 4
Motif ID: 190
Motif name: Motif 190
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 11
Similarity score: 0.0602532

Alignment:
CAATGCCAATGCS
CCAGGCCAGGS--

Original motif     Consensus sequence: CAATGCCAATGCS Reverse complement motif     Consensus sequence: SGCATTGGCATTG


Dataset #: 4 Motif ID: 186 Motif name: Motif 186

Original motif     Consensus sequence: AAAACAAA Reverse complement motif     Consensus sequence: TTTGTTTT

Best Matches for Motif ID 186 (Highest to Lowest)

Dataset #: 3
Motif ID: 148
Motif name: Motif 148
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 4
Number of overlap: 8
Similarity score: 0.0225197

Alignment:
TTGTTTKTTTT
---TTTGTTTT

Original motif     Consensus sequence: AAAAYAAACAA Reverse complement motif     Consensus sequence: TTGTTTKTTTT


Dataset #: 4 Motif ID: 187 Motif name: Motif 187

Original motif     Consensus sequence: TCCATTCATT Reverse complement motif     Consensus sequence: AATGAATGGA

Best Matches for Motif ID 187 (Highest to Lowest)

Dataset #: 1
Motif ID: 52
Motif name: Motif 52
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0349361

Alignment:
AGTGAAGGGGA
-AATGAATGGA

Original motif     Consensus sequence: AGTGAAGGGGA Reverse complement motif     Consensus sequence: TCCCCTTCACT


Dataset #: 4 Motif ID: 188 Motif name: Motif 188

Original motif     Consensus sequence: ATAATAATA Reverse complement motif     Consensus sequence: TATTATTAT

Best Matches for Motif ID 188 (Highest to Lowest)

Dataset #: 1
Motif ID: 33
Motif name: Motif 33
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 9
Similarity score: 0.0608811

Alignment:
GGATTTTTAATGACC
-TATTATTAT-----

Original motif     Consensus sequence: GGTCATTAAAAATCC Reverse complement motif     Consensus sequence: GGATTTTTAATGACC


Dataset #: 4 Motif ID: 189 Motif name: Motif 189

Original motif     Consensus sequence: AAAATGGCGACB Reverse complement motif     Consensus sequence: BGTCGCCATTTT

Best Matches for Motif ID 189 (Highest to Lowest)

Dataset #: 3
Motif ID: 116
Motif name: Motif 116
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 12
Similarity score: 0.00706037

Alignment:
HCAAVATGGCGGCBV
--AAAATGGCGACB-

Original motif     Consensus sequence: HCAAVATGGCGGCBV Reverse complement motif     Consensus sequence: VBGCCGCCATVTTGD


Dataset #: 4 Motif ID: 190 Motif name: Motif 190

Original motif     Consensus sequence: CAATGCCAATGCS Reverse complement motif     Consensus sequence: SGCATTGGCATTG

Best Matches for Motif ID 190 (Highest to Lowest)

Dataset #: 3
Motif ID: 125
Motif name: Motif 125
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 13
Similarity score: 0.0699196

Alignment:
SVASTGCGCATGCG
CAATGCCAATGCS-

Original motif     Consensus sequence: CGCATGCGCASTVS Reverse complement motif     Consensus sequence: SVASTGCGCATGCG


Dataset #: 4 Motif ID: 191 Motif name: Motif 191

Original motif     Consensus sequence: AWAATCAATA Reverse complement motif     Consensus sequence: TATTGATTWT

Best Matches for Motif ID 191 (Highest to Lowest)

Dataset #: 3
Motif ID: 138
Motif name: Motif 138
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0682364

Alignment:
TMAWTATTCATGAG
----TATTGATTWT

Original motif     Consensus sequence: CTCATGAATAWTYA Reverse complement motif     Consensus sequence: TMAWTATTCATGAG


Dataset #: 4 Motif ID: 192 Motif name: Motif 192

Original motif     Consensus sequence: CTAGWCTAG Reverse complement motif     Consensus sequence: CTAGWCTAG

Best Matches for Motif ID 192 (Highest to Lowest)

Dataset #: 1
Motif ID: 26
Motif name: Motif 26
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 9
Similarity score: 0.00310954

Alignment:
TTTAGCCTAC
CTAGWCTAG-

Original motif     Consensus sequence: GTAGGCTAAA Reverse complement motif     Consensus sequence: TTTAGCCTAC


Dataset #: 4 Motif ID: 193 Motif name: Motif 193

Original motif     Consensus sequence: TGCATGCA Reverse complement motif     Consensus sequence: TGCATGCA

Best Matches for Motif ID 193 (Highest to Lowest)

Dataset #: 1
Motif ID: 31
Motif name: Motif 31
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 3
Number of overlap: 8
Similarity score: 0.0330444

Alignment:
GCGCATGCGCA
-TGCATGCA--

Original motif     Consensus sequence: GCGCATGCGCA Reverse complement motif     Consensus sequence: TGCGCATGCGC


Dataset #: 4 Motif ID: 194 Motif name: Motif 194

Original motif     Consensus sequence: CGATCGAGD Reverse complement motif     Consensus sequence: HCTCGATCG

Best Matches for Motif ID 194 (Highest to Lowest)

Dataset #: 1
Motif ID: 7
Motif name: Motif 7
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 9
Similarity score: 0.0308648

Alignment:
CCTCCATCH
HCTCGATCG

Original motif     Consensus sequence: CCTCCATCH Reverse complement motif     Consensus sequence: HGATGGAGG


Dataset #: 4 Motif ID: 195 Motif name: Motif 195

Original motif     Consensus sequence: RTACCGGTAY Reverse complement motif     Consensus sequence: KTACCGGTAM

Best Matches for Motif ID 195 (Highest to Lowest)

Dataset #: 3
Motif ID: 133
Motif name: Motif 133
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.00327138

Alignment:
DVTACWWGTABH
-RTACCGGTAY-

Original motif     Consensus sequence: DVTACWWGTABH Reverse complement motif     Consensus sequence: HBTACWWGTAVD


Dataset #: 4 Motif ID: 196 Motif name: Motif 196

Original motif     Consensus sequence: RTGGGACTRH Reverse complement motif     Consensus sequence: HMAGTCCCAM

Best Matches for Motif ID 196 (Highest to Lowest)

Dataset #: 4
Motif ID: 217
Motif name: Motif 217
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 10
Similarity score: 0.0603034

Alignment:
ACGTATCAGTCCACG
-----HMAGTCCCAM

Original motif     Consensus sequence: CGTGGACTGATACGT Reverse complement motif     Consensus sequence: ACGTATCAGTCCACG


Dataset #: 4 Motif ID: 197 Motif name: Motif 197

Original motif     Consensus sequence: CATCATCATCATCA Reverse complement motif     Consensus sequence: TGATGATGATGATG

Best Matches for Motif ID 197 (Highest to Lowest)

Dataset #: 3
Motif ID: 162
Motif name: Motif 162
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0184336

Alignment:
ATGATGATGATGAYR
TGATGATGATGATG-

Original motif     Consensus sequence: ATGATGATGATGAYR Reverse complement motif     Consensus sequence: MMTCATCATCATCAT


Dataset #: 4 Motif ID: 198 Motif name: Motif 198

Original motif     Consensus sequence: AACAACAACA Reverse complement motif     Consensus sequence: TGTTGTTGTT

Best Matches for Motif ID 198 (Highest to Lowest)

Dataset #: 2
Motif ID: 112
Motif name: Motif 112
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 10
Similarity score: 0.00607656

Alignment:
TTGTTGTTGTTGTTG
----TGTTGTTGTT-

Original motif     Consensus sequence: CAACAACAACAACAA Reverse complement motif     Consensus sequence: TTGTTGTTGTTGTTG


Dataset #: 4 Motif ID: 199 Motif name: Motif 199

Original motif     Consensus sequence: CTCAGCTCAG Reverse complement motif     Consensus sequence: CTGAGCTGAG

Best Matches for Motif ID 199 (Highest to Lowest)

Dataset #: 1
Motif ID: 25
Motif name: Motif 25
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 10
Similarity score: 0.0212842

Alignment:
GGCYCAGCCCTGCT
--CTCAGCTCAG--

Original motif     Consensus sequence: AGCAGGGCTGMGCC Reverse complement motif     Consensus sequence: GGCYCAGCCCTGCT


Dataset #: 4 Motif ID: 200 Motif name: Motif 200

Original motif     Consensus sequence: CTCKAGCTCTGC Reverse complement motif     Consensus sequence: GCAGAGCTYGAG

Best Matches for Motif ID 200 (Highest to Lowest)

Dataset #: 1
Motif ID: 5
Motif name: Motif 5
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 12
Similarity score: 0.0689889

Alignment:
AGAGAGAGAGAGAGA
-GCAGAGCTYGAG--

Original motif     Consensus sequence: AGAGAGAGAGAGAGA Reverse complement motif     Consensus sequence: TCTCTCTCTCTCTCT


Dataset #: 4 Motif ID: 201 Motif name: Motif 201

Original motif     Consensus sequence: AGAKGGCAGCA Reverse complement motif     Consensus sequence: TGCTGCCYTCT

Best Matches for Motif ID 201 (Highest to Lowest)

Dataset #: 3
Motif ID: 116
Motif name: Motif 116
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.0623357

Alignment:
HCAAVATGGCGGCBV
---AGAKGGCAGCA-

Original motif     Consensus sequence: HCAAVATGGCGGCBV Reverse complement motif     Consensus sequence: VBGCCGCCATVTTGD


Dataset #: 4 Motif ID: 202 Motif name: Motif 202

Original motif     Consensus sequence: CAATGCAA Reverse complement motif     Consensus sequence: TTGCATTG

Best Matches for Motif ID 202 (Highest to Lowest)

Dataset #: 4
Motif ID: 190
Motif name: Motif 190
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0347552

Alignment:
SGCATTGGCATTG
-----TTGCATTG

Original motif     Consensus sequence: CAATGCCAATGCS Reverse complement motif     Consensus sequence: SGCATTGGCATTG


Dataset #: 4 Motif ID: 203 Motif name: Motif 203

Original motif     Consensus sequence: CCAVCTCCA Reverse complement motif     Consensus sequence: TGGAGVTGG

Best Matches for Motif ID 203 (Highest to Lowest)

Dataset #: 4
Motif ID: 204
Motif name: Motif 204
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 2
Number of overlap: 9
Similarity score: 0.0344662

Alignment:
ACCACCACCA
-CCAVCTCCA

Original motif     Consensus sequence: ACCACCACCA Reverse complement motif     Consensus sequence: TGGTGGTGGT


Dataset #: 4 Motif ID: 204 Motif name: Motif 204

Original motif     Consensus sequence: ACCACCACCA Reverse complement motif     Consensus sequence: TGGTGGTGGT

Best Matches for Motif ID 204 (Highest to Lowest)

Dataset #: 2
Motif ID: 112
Motif name: Motif 112
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 6
Number of overlap: 10
Similarity score: 0.0534602

Alignment:
TTGTTGTTGTTGTTG
TGGTGGTGGT-----

Original motif     Consensus sequence: CAACAACAACAACAA Reverse complement motif     Consensus sequence: TTGTTGTTGTTGTTG


Dataset #: 4 Motif ID: 205 Motif name: Motif 205

Original motif     Consensus sequence: TAGACCGAA Reverse complement motif     Consensus sequence: TTCGGTCTA

Best Matches for Motif ID 205 (Highest to Lowest)

Dataset #: 1
Motif ID: 53
Motif name: Motif 53
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 6
Number of overlap: 9
Similarity score: 0.0392993

Alignment:
ACAGACCRCAGGTTG
-TAGACCGAA-----

Original motif     Consensus sequence: ACAGACCRCAGGTTG Reverse complement motif     Consensus sequence: CAACCTGKGGTCTGT


Dataset #: 4 Motif ID: 206 Motif name: Motif 206

Original motif     Consensus sequence: CCTGGATCCGCCMCT Reverse complement motif     Consensus sequence: AGYGGCGGATCCAGG

Best Matches for Motif ID 206 (Highest to Lowest)

Dataset #: 1
Motif ID: 23
Motif name: Motif 23
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 15
Similarity score: 0.0903652

Alignment:
AACCACTGAGCCACC
AGYGGCGGATCCAGG

Original motif     Consensus sequence: AACCACTGAGCCACC Reverse complement motif     Consensus sequence: GGTGGCTCAGTGGTT


Dataset #: 4 Motif ID: 207 Motif name: Motif 207

Original motif     Consensus sequence: CTGCAGCTGCAG Reverse complement motif     Consensus sequence: CTGCAGCTGCAG

Best Matches for Motif ID 207 (Highest to Lowest)

Dataset #: 4
Motif ID: 206
Motif name: Motif 206
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Backward
Position number: 2
Number of overlap: 12
Similarity score: 0.0881932

Alignment:
CCTGGATCCGCCMCT
--CTGCAGCTGCAG-

Original motif     Consensus sequence: CCTGGATCCGCCMCT Reverse complement motif     Consensus sequence: AGYGGCGGATCCAGG


Dataset #: 4 Motif ID: 208 Motif name: Motif 208

Original motif     Consensus sequence: TTSAASTTSAA Reverse complement motif     Consensus sequence: TTSAASTTSAA

Best Matches for Motif ID 208 (Highest to Lowest)

Dataset #: 2
Motif ID: 72
Motif name: Motif 72
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 11
Similarity score: 0.0502082

Alignment:
KKTCACGTGAMM
TTSAASTTSAA-

Original motif     Consensus sequence: RRTCACGTGAYY Reverse complement motif     Consensus sequence: KKTCACGTGAMM


Dataset #: 4 Motif ID: 209 Motif name: Motif 209

Original motif     Consensus sequence: AACAATAG Reverse complement motif     Consensus sequence: CTATTGTT

Best Matches for Motif ID 209 (Highest to Lowest)

Dataset #: 3
Motif ID: 124
Motif name: Motif 124
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.0201281

Alignment:
VCKATTGTT
-CTATTGTT

Original motif     Consensus sequence: AACAATRGV Reverse complement motif     Consensus sequence: VCKATTGTT


Dataset #: 4 Motif ID: 210 Motif name: Motif 210

Original motif     Consensus sequence: ACGTACGTACGT Reverse complement motif     Consensus sequence: ACGTACGTACGT

Best Matches for Motif ID 210 (Highest to Lowest)

Dataset #: 1
Motif ID: 44
Motif name: Motif 44
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.0829865

Alignment:
ACGDGCGCGCGC
ACGTACGTACGT

Original motif     Consensus sequence: GCGCGCGCDCGT Reverse complement motif     Consensus sequence: ACGDGCGCGCGC


Dataset #: 4 Motif ID: 211 Motif name: Motif 211

Original motif     Consensus sequence: TACTACTACTACT Reverse complement motif     Consensus sequence: AGTAGTAGTAGTA

Best Matches for Motif ID 211 (Highest to Lowest)

Dataset #: 3
Motif ID: 168
Motif name: Motif 168
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 13
Similarity score: 0.0464563

Alignment:
ATAGTAGAAWTYGGC
AGTAGTAGTAGTA--

Original motif     Consensus sequence: ATAGTAGAAWTYGGC Reverse complement motif     Consensus sequence: GCCKAWTTCTACTAT


Dataset #: 4 Motif ID: 212 Motif name: Motif 212

Original motif     Consensus sequence: ACAATGGA Reverse complement motif     Consensus sequence: TCCATTGT

Best Matches for Motif ID 212 (Highest to Lowest)

Dataset #: 1
Motif ID: 29
Motif name: Motif 29
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 1
Number of overlap: 8
Similarity score: 0.018669

Alignment:
ACAATGCA
ACAATGGA

Original motif     Consensus sequence: ACAATGCA Reverse complement motif     Consensus sequence: TGCATTGT


Dataset #: 4 Motif ID: 213 Motif name: Motif 213

Original motif     Consensus sequence: TGATTGGTCAAW Reverse complement motif     Consensus sequence: WTTGACCAATCA

Best Matches for Motif ID 213 (Highest to Lowest)

Dataset #: 4
Motif ID: 219
Motif name: Motif 219
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 1
Number of overlap: 12
Similarity score: 0.0944626

Alignment:
CGCTWGTTCAGAA
TGATTGGTCAAW-

Original motif     Consensus sequence: CGCTWGTTCAGAA Reverse complement motif     Consensus sequence: TTCTGAACWAGCG


Dataset #: 4 Motif ID: 214 Motif name: Motif 214

Original motif     Consensus sequence: CGCGCGCGC Reverse complement motif     Consensus sequence: GCGCGCGCG

Best Matches for Motif ID 214 (Highest to Lowest)

Dataset #: 1
Motif ID: 44
Motif name: Motif 44
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 9
Similarity score: 0.0144896

Alignment:
ACGDGCGCGCGC
CGCGCGCGC---

Original motif     Consensus sequence: GCGCGCGCDCGT Reverse complement motif     Consensus sequence: ACGDGCGCGCGC


Dataset #: 4 Motif ID: 215 Motif name: Motif 215

Original motif     Consensus sequence: ACAGCCAGGATAG Reverse complement motif     Consensus sequence: CTATCCTGGCTGT

Best Matches for Motif ID 215 (Highest to Lowest)

Dataset #: 1
Motif ID: 12
Motif name: Motif 12
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 3
Number of overlap: 13
Similarity score: 0.0901419

Alignment:
TCACAGCAAGAAGGT
ACAGCCAGGATAG--

Original motif     Consensus sequence: ACCTTCTTGCTGTGA Reverse complement motif     Consensus sequence: TCACAGCAAGAAGGT


Dataset #: 4 Motif ID: 216 Motif name: Motif 216

Original motif     Consensus sequence: CACTCCAGCAAAG Reverse complement motif     Consensus sequence: CTTTGCTGGAGTG

Best Matches for Motif ID 216 (Highest to Lowest)

Dataset #: 1
Motif ID: 12
Motif name: Motif 12
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 13
Similarity score: 0.0845409

Alignment:
TCACAGCAAGAAGGT
-CACTCCAGCAAAG-

Original motif     Consensus sequence: ACCTTCTTGCTGTGA Reverse complement motif     Consensus sequence: TCACAGCAAGAAGGT


Dataset #: 4 Motif ID: 217 Motif name: Motif 217

Original motif     Consensus sequence: CGTGGACTGATACGT Reverse complement motif     Consensus sequence: ACGTATCAGTCCACG

Best Matches for Motif ID 217 (Highest to Lowest)

Dataset #: 1
Motif ID: 23
Motif name: Motif 23
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 15
Similarity score: 0.130486

Alignment:
GGTGGCTCAGTGGTT
CGTGGACTGATACGT

Original motif     Consensus sequence: AACCACTGAGCCACC Reverse complement motif     Consensus sequence: GGTGGCTCAGTGGTT


Dataset #: 4 Motif ID: 218 Motif name: Motif 218

Original motif     Consensus sequence: ACACCACTGTACAA Reverse complement motif     Consensus sequence: TTGTACAGTGGTGT

Best Matches for Motif ID 218 (Highest to Lowest)

Dataset #: 1
Motif ID: 63
Motif name: Motif 63
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 14
Similarity score: 0.0971191

Alignment:
GTGTATGGGTGTTT
TTGTACAGTGGTGT

Original motif     Consensus sequence: AAACACCCATACAC Reverse complement motif     Consensus sequence: GTGTATGGGTGTTT


Dataset #: 4 Motif ID: 219 Motif name: Motif 219

Original motif     Consensus sequence: CGCTWGTTCAGAA Reverse complement motif     Consensus sequence: TTCTGAACWAGCG

Best Matches for Motif ID 219 (Highest to Lowest)

Dataset #: 2
Motif ID: 92
Motif name: Motif 92
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 1
Number of overlap: 13
Similarity score: 0.0936426

Alignment:
CTSTAACCCAGWGGT
TTCTGAACWAGCG--

Original motif     Consensus sequence: ACCWCTGGGTTASAG Reverse complement motif     Consensus sequence: CTSTAACCCAGWGGT


Dataset #: 4 Motif ID: 220 Motif name: Motif 220

Original motif     Consensus sequence: CAGCCGCATCGRC Reverse complement motif     Consensus sequence: GMCGATGCGGCTG

Best Matches for Motif ID 220 (Highest to Lowest)

Dataset #: 4
Motif ID: 197
Motif name: Motif 197
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 13
Similarity score: 0.068711

Alignment:
TGATGATGATGATG
-GMCGATGCGGCTG

Original motif     Consensus sequence: CATCATCATCATCA Reverse complement motif     Consensus sequence: TGATGATGATGATG


Dataset #: 4 Motif ID: 221 Motif name: Motif 221

Original motif     Consensus sequence: AAACCGTCATA Reverse complement motif     Consensus sequence: TATGACGGTTT

Best Matches for Motif ID 221 (Highest to Lowest)

Dataset #: 1
Motif ID: 63
Motif name: Motif 63
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Backward
Position number: 4
Number of overlap: 11
Similarity score: 0.070156

Alignment:
AAACACCCATACAC
AAACCGTCATA---

Original motif     Consensus sequence: AAACACCCATACAC Reverse complement motif     Consensus sequence: GTGTATGGGTGTTT


Dataset #: 4 Motif ID: 222 Motif name: Motif 222

Original motif     Consensus sequence: AATCTAAAAGTCCCT Reverse complement motif     Consensus sequence: AGGGACTTTTAGATT

Best Matches for Motif ID 222 (Highest to Lowest)

Dataset #: 2
Motif ID: 105
Motif name: Motif 105
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 15
Similarity score: 0.123824

Alignment:
GGCGTATGTGTCCTT
AATCTAAAAGTCCCT

Original motif     Consensus sequence: AAGGACACATACGCC Reverse complement motif     Consensus sequence: GGCGTATGTGTCCTT


Dataset #: 4 Motif ID: 223 Motif name: Motif 223

Original motif     Consensus sequence: AGAGATCAGTG Reverse complement motif     Consensus sequence: CACTGATCTCT

Best Matches for Motif ID 223 (Highest to Lowest)

Dataset #: 1
Motif ID: 59
Motif name: Motif 59
Matching format of first motif: Original Motif
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 2
Number of overlap: 11
Similarity score: 0.0843285

Alignment:
KTGTCATCAGAGGG
--AGAGATCAGTG-

Original motif     Consensus sequence: CCCTCTGATGACAY Reverse complement motif     Consensus sequence: KTGTCATCAGAGGG


Dataset #: 4 Motif ID: 224 Motif name: Motif 224

Original motif     Consensus sequence: KATTACGTAATM Reverse complement motif     Consensus sequence: YATTACGTAATR

Best Matches for Motif ID 224 (Highest to Lowest)

Dataset #: 4
Motif ID: 183
Motif name: Motif 183
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Backward
Position number: 1
Number of overlap: 12
Similarity score: 0.00908452

Alignment:
HATGACGTCATD
YATTACGTAATR

Original motif     Consensus sequence: DATGACGTCATH Reverse complement motif     Consensus sequence: HATGACGTCATD


Dataset #: 4 Motif ID: 225 Motif name: Motif 225

Original motif     Consensus sequence: TGTWWACA Reverse complement motif     Consensus sequence: TGTWWACA

Best Matches for Motif ID 225 (Highest to Lowest)

Dataset #: 3
Motif ID: 170
Motif name: Motif 170
Matching format of first motif: Original Motif
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 8
Similarity score: 0.009752

Alignment:
ACTGTTTACAAGC
--TGTWWACA---

Original motif     Consensus sequence: ACTGTTTACAAGC Reverse complement motif     Consensus sequence: GCTTGTAAACAGT


Dataset #: 4 Motif ID: 226 Motif name: Motif 226

Original motif     Consensus sequence: CGTCGCGTCGCS Reverse complement motif     Consensus sequence: SGCGACGCGACG

Best Matches for Motif ID 226 (Highest to Lowest)

Dataset #: 4
Motif ID: 177
Motif name: Motif 177
Matching format of first motif: Reverse Complement
Matching format of second motif: Reverse Complement
Direction: Forward
Position number: 2
Number of overlap: 12
Similarity score: 0.0523187

Alignment:
CBSCVSMGCKSBGSVG
-SGCGACGCGACG---

Original motif     Consensus sequence: CVSCBSRGCYSVGSBG Reverse complement motif     Consensus sequence: CBSCVSMGCKSBGSVG


Dataset #: 4 Motif ID: 227 Motif name: Motif 227

Original motif     Consensus sequence: GTACASTGTAC Reverse complement motif     Consensus sequence: GTACASTGTAC

Best Matches for Motif ID 227 (Highest to Lowest)

Dataset #: 4
Motif ID: 218
Motif name: Motif 218
Matching format of first motif: Reverse Complement
Matching format of second motif: Original Motif
Direction: Forward
Position number: 3
Number of overlap: 11
Similarity score: 0.0429449

Alignment:
ACACCACTGTACAA
--GTACASTGTAC-

Original motif     Consensus sequence: ACACCACTGTACAA Reverse complement motif     Consensus sequence: TTGTACAGTGGTGT