**************************************************************************************************************************************************************************************************** MOTIFSIM - Motif Similarity Detection Tool Version 2.2 **************************************************************************************************************************************************************************************************** INPUT **************************************************************************************************************************************************************************************************** Input Parameters Number of files: 5 Number of top significant motifs: 5 Number of best matches: 5 Similarity cutoff: >= 0.75 Matching motif database: Jaspar Urochordates Motif tree: Yes Combined similar motifs: Yes Output file type: All Output file format: All Input files and motif counts File name Count of motifs Dataset # DREME_DM230.txt 1 1 MEME_DM230.txt 20 2 PScanChIP_DM230.txt 14 3 RSAT_peak-motifs_DM230.txt 10 4 W-ChIPMotifs_DM230.txt 11 5 **************************************************************************************************************************************************************************************************** RESULTS **************************************************************************************************************************************************************************************************** ********************************************************************** Best Matches in Database for Each Motif (Highest to Lowest) ***************************************************************** Dataset #: 1 Motif ID: 1 Motif name: Motif 1 Original motif 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.148148 0.000000 0.851852 0.000000 0.000000 1.000000 0.000000 0.000000 Consensus sequence: GGCGGGGC Reserve complement motif 0.000000 0.000000 1.000000 0.000000 0.148148 0.851852 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 Consensus sequence: GCCCCGCC ************************************************************************ Best Matches for Motif ID 1 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0118.1 Macho-1 Reverse Complement Reverse Complement Forward 1 8 0.015649 Taxon: Urochordates Original motif 0.119048 0.357143 0.142857 0.380952 0.214286 0.047619 0.547619 0.190476 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.071429 0.095238 0.547619 0.285714 0.000000 0.000000 1.000000 0.000000 0.119048 0.166667 0.357143 0.357143 0.119048 0.333333 0.095238 0.452381 0.309524 0.333333 0.238095 0.119048 Consensus sequence: BGGGKGBYV Reverse complement motif 0.309524 0.238095 0.333333 0.119048 0.452381 0.333333 0.095238 0.119048 0.119048 0.357143 0.166667 0.357143 0.000000 1.000000 0.000000 0.000000 0.071429 0.547619 0.095238 0.285714 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.214286 0.547619 0.047619 0.190476 0.380952 0.357143 0.142857 0.119048 Consensus sequence: VMBCYCCCV Alignment: VMBCYCCCV GCCCCGCC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 2 Motif name: Motif 2 Original motif 0.628571 0.000000 0.323810 0.047619 0.295238 0.000000 0.704762 0.000000 0.495238 0.009524 0.419048 0.076190 0.885715 0.028571 0.076190 0.009524 0.171429 0.095238 0.685714 0.047619 0.666667 0.038095 0.295238 0.000000 0.390476 0.009524 0.580952 0.019048 0.361905 0.000000 0.619047 0.019048 0.238095 0.228571 0.504763 0.028571 0.504762 0.228571 0.142857 0.123810 0.333333 0.076190 0.590477 0.000000 0.428571 0.000000 0.571429 0.000000 0.676190 0.057143 0.123810 0.142857 0.457143 0.009524 0.533333 0.000000 Consensus sequence: RGRAGARRGARRAR Reserve complement motif 0.457143 0.533333 0.009524 0.000000 0.142857 0.057143 0.123810 0.676190 0.428571 0.571429 0.000000 0.000000 0.333333 0.590477 0.076190 0.000000 0.123810 0.228571 0.142857 0.504762 0.238095 0.504763 0.228571 0.028571 0.361905 0.619047 0.000000 0.019048 0.390476 0.580952 0.009524 0.019048 0.000000 0.038095 0.295238 0.666667 0.171429 0.685714 0.095238 0.047619 0.009524 0.028571 0.076190 0.885715 0.076190 0.009524 0.419048 0.495238 0.295238 0.704762 0.000000 0.000000 0.047619 0.000000 0.323810 0.628571 Consensus sequence: MTMMTCMMTCTKCK ************************************************************************ Best Matches for Motif ID 2 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0118.1 Macho-1 Reverse Complement Reverse Complement Forward 3 9 0.018816 Taxon: Urochordates Original motif 0.119048 0.357143 0.142857 0.380952 0.214286 0.047619 0.547619 0.190476 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.071429 0.095238 0.547619 0.285714 0.000000 0.000000 1.000000 0.000000 0.119048 0.166667 0.357143 0.357143 0.119048 0.333333 0.095238 0.452381 0.309524 0.333333 0.238095 0.119048 Consensus sequence: BGGGKGBYV Reverse complement motif 0.309524 0.238095 0.333333 0.119048 0.452381 0.333333 0.095238 0.119048 0.119048 0.357143 0.166667 0.357143 0.000000 1.000000 0.000000 0.000000 0.071429 0.547619 0.095238 0.285714 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.214286 0.547619 0.047619 0.190476 0.380952 0.357143 0.142857 0.119048 Consensus sequence: VMBCYCCCV Alignment: VMBCYCCCV----- --MTMMTCMMTCTKCK ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 2 Motif ID: 7 Motif name: Motif 7 Original motif 0.094340 0.566037 0.113208 0.226415 0.150943 0.547170 0.283019 0.018868 0.018868 0.000000 0.622641 0.358491 0.000000 0.943396 0.056604 0.000000 0.018868 0.811321 0.000000 0.169811 0.018868 0.943396 0.000000 0.037736 0.000000 0.981132 0.018868 0.000000 0.037736 0.000000 0.867924 0.094340 0.018868 0.981132 0.000000 0.000000 0.075472 0.924528 0.000000 0.000000 0.000000 0.830189 0.000000 0.169811 0.132075 0.773585 0.000000 0.094340 0.000000 0.433962 0.377358 0.188679 0.075472 0.358491 0.075472 0.490566 Consensus sequence: CSKCCCCGCCCCSY Reserve complement motif 0.490566 0.358491 0.075472 0.075472 0.000000 0.377358 0.433962 0.188679 0.132075 0.000000 0.773585 0.094340 0.000000 0.000000 0.830189 0.169811 0.075472 0.000000 0.924528 0.000000 0.018868 0.000000 0.981132 0.000000 0.037736 0.867924 0.000000 0.094340 0.000000 0.018868 0.981132 0.000000 0.018868 0.000000 0.943396 0.037736 0.018868 0.000000 0.811321 0.169811 0.000000 0.056604 0.943396 0.000000 0.018868 0.622641 0.000000 0.358491 0.150943 0.283019 0.547170 0.018868 0.094340 0.113208 0.566037 0.226415 Consensus sequence: MSGGGGCGGGGYSG ************************************************************************ Best Matches for Motif ID 7 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0118.1 Macho-1 Original Motif Reverse Complement Backward 6 9 0.000000 Taxon: Urochordates Original motif 0.119048 0.357143 0.142857 0.380952 0.214286 0.047619 0.547619 0.190476 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.071429 0.095238 0.547619 0.285714 0.000000 0.000000 1.000000 0.000000 0.119048 0.166667 0.357143 0.357143 0.119048 0.333333 0.095238 0.452381 0.309524 0.333333 0.238095 0.119048 Consensus sequence: BGGGKGBYV Reverse complement motif 0.309524 0.238095 0.333333 0.119048 0.452381 0.333333 0.095238 0.119048 0.119048 0.357143 0.166667 0.357143 0.000000 1.000000 0.000000 0.000000 0.071429 0.547619 0.095238 0.285714 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.214286 0.547619 0.047619 0.190476 0.380952 0.357143 0.142857 0.119048 Consensus sequence: VMBCYCCCV Alignment: -----BGGGKGBYV CSKCCCCGCCCCSY----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 22 Motif name: Zfx Original motif 0.105042 0.371849 0.376050 0.147059 0.125786 0.356394 0.360587 0.157233 0.190377 0.315900 0.416318 0.077406 0.150313 0.102296 0.622129 0.125261 0.020790 0.617464 0.299376 0.062370 0.012474 0.752599 0.004158 0.230769 0.062370 0.259875 0.378378 0.299376 0.397089 0.320166 0.251559 0.031185 0.018711 0.004158 0.975052 0.002079 0.000000 0.006237 0.991684 0.002079 0.002079 0.997921 0.000000 0.000000 0.000000 0.997921 0.000000 0.002079 0.000000 0.004158 0.000000 0.995842 0.174636 0.253638 0.455301 0.116424 Consensus sequence: BBVGCCBVGGCCTV Reserve complement motif 0.174636 0.455301 0.253638 0.116424 0.995842 0.004158 0.000000 0.000000 0.000000 0.000000 0.997921 0.002079 0.002079 0.000000 0.997921 0.000000 0.000000 0.991684 0.006237 0.002079 0.018711 0.975052 0.004158 0.002079 0.031185 0.320166 0.251559 0.397089 0.062370 0.378378 0.259875 0.299376 0.012474 0.004158 0.752599 0.230769 0.020790 0.299376 0.617464 0.062370 0.150313 0.622129 0.102296 0.125261 0.190377 0.416318 0.315900 0.077406 0.125786 0.360587 0.356394 0.157233 0.105042 0.376050 0.371849 0.147059 Consensus sequence: VAGGCCBBGGCVBB ************************************************************************ Best Matches for Motif ID 22 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0118.1 Macho-1 Reverse Complement Original Motif Backward 6 9 0.016487 Taxon: Urochordates Original motif 0.119048 0.357143 0.142857 0.380952 0.214286 0.047619 0.547619 0.190476 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.071429 0.095238 0.547619 0.285714 0.000000 0.000000 1.000000 0.000000 0.119048 0.166667 0.357143 0.357143 0.119048 0.333333 0.095238 0.452381 0.309524 0.333333 0.238095 0.119048 Consensus sequence: BGGGKGBYV Reverse complement motif 0.309524 0.238095 0.333333 0.119048 0.452381 0.333333 0.095238 0.119048 0.119048 0.357143 0.166667 0.357143 0.000000 1.000000 0.000000 0.000000 0.071429 0.547619 0.095238 0.285714 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.214286 0.547619 0.047619 0.190476 0.380952 0.357143 0.142857 0.119048 Consensus sequence: VMBCYCCCV Alignment: -----VMBCYCCCV VAGGCCBBGGCVBB----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 23 Motif name: Egr1 Original motif 0.200000 0.266667 0.066667 0.466667 0.133333 0.066667 0.800000 0.000000 0.000000 0.866667 0.000000 0.133333 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.200000 0.800000 0.200000 0.000000 0.800000 0.000000 0.066667 0.000000 0.933333 0.000000 0.000000 0.000000 1.000000 0.000000 0.133333 0.666667 0.000000 0.200000 0.000000 0.000000 1.000000 0.000000 0.066667 0.000000 0.466667 0.466667 Consensus sequence: HGCGTGGGCGK Reserve complement motif 0.066667 0.466667 0.000000 0.466667 0.000000 1.000000 0.000000 0.000000 0.133333 0.000000 0.666667 0.200000 0.000000 1.000000 0.000000 0.000000 0.066667 0.933333 0.000000 0.000000 0.200000 0.800000 0.000000 0.000000 0.800000 0.000000 0.200000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.866667 0.133333 0.133333 0.800000 0.066667 0.000000 0.466667 0.266667 0.066667 0.200000 Consensus sequence: YCGCCCACGCH ************************************************************************ Best Matches for Motif ID 23 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0118.1 Macho-1 Original Motif Original Motif Backward 3 9 0.053590 Taxon: Urochordates Original motif 0.119048 0.357143 0.142857 0.380952 0.214286 0.047619 0.547619 0.190476 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.071429 0.095238 0.547619 0.285714 0.000000 0.000000 1.000000 0.000000 0.119048 0.166667 0.357143 0.357143 0.119048 0.333333 0.095238 0.452381 0.309524 0.333333 0.238095 0.119048 Consensus sequence: BGGGKGBYV Reverse complement motif 0.309524 0.238095 0.333333 0.119048 0.452381 0.333333 0.095238 0.119048 0.119048 0.357143 0.166667 0.357143 0.000000 1.000000 0.000000 0.000000 0.071429 0.547619 0.095238 0.285714 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.214286 0.547619 0.047619 0.190476 0.380952 0.357143 0.142857 0.119048 Consensus sequence: VMBCYCCCV Alignment: --BGGGKGBYV HGCGTGGGCGK-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 24 Motif name: SP1 Original motif 0.000000 0.914286 0.028571 0.057143 0.000000 0.857143 0.028571 0.114286 0.000000 1.000000 0.000000 0.000000 0.114286 0.771429 0.000000 0.114286 0.057143 0.142857 0.428571 0.371429 0.000000 0.800000 0.028571 0.171429 0.028571 0.885714 0.000000 0.085714 0.000000 0.685714 0.085714 0.228571 0.171429 0.714286 0.000000 0.114286 0.085714 0.742857 0.085714 0.085714 Consensus sequence: CCCCKCCCCC Reserve complement motif 0.085714 0.085714 0.742857 0.085714 0.171429 0.000000 0.714286 0.114286 0.000000 0.085714 0.685714 0.228571 0.028571 0.000000 0.885714 0.085714 0.000000 0.028571 0.800000 0.171429 0.057143 0.428571 0.142857 0.371429 0.114286 0.000000 0.771429 0.114286 0.000000 0.000000 1.000000 0.000000 0.000000 0.028571 0.857143 0.114286 0.000000 0.028571 0.914286 0.057143 Consensus sequence: GGGGGYGGGG ************************************************************************ Best Matches for Motif ID 24 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0118.1 Macho-1 Original Motif Reverse Complement Forward 1 9 0.053545 Taxon: Urochordates Original motif 0.119048 0.357143 0.142857 0.380952 0.214286 0.047619 0.547619 0.190476 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.071429 0.095238 0.547619 0.285714 0.000000 0.000000 1.000000 0.000000 0.119048 0.166667 0.357143 0.357143 0.119048 0.333333 0.095238 0.452381 0.309524 0.333333 0.238095 0.119048 Consensus sequence: BGGGKGBYV Reverse complement motif 0.309524 0.238095 0.333333 0.119048 0.452381 0.333333 0.095238 0.119048 0.119048 0.357143 0.166667 0.357143 0.000000 1.000000 0.000000 0.000000 0.071429 0.547619 0.095238 0.285714 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.214286 0.547619 0.047619 0.190476 0.380952 0.357143 0.142857 0.119048 Consensus sequence: VMBCYCCCV Alignment: VMBCYCCCV- CCCCKCCCCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 25 Motif name: TFAP2A Original motif 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.118919 0.383784 0.248649 0.248649 0.102703 0.308108 0.329730 0.259459 0.297297 0.237838 0.362162 0.102703 0.286486 0.162162 0.491892 0.059459 0.102703 0.086486 0.740541 0.070270 0.048649 0.421622 0.427027 0.102703 Consensus sequence: GCCBBVRGS Reserve complement motif 0.048649 0.427027 0.421622 0.102703 0.102703 0.740541 0.086486 0.070270 0.286486 0.491892 0.162162 0.059459 0.297297 0.362162 0.237838 0.102703 0.102703 0.329730 0.308108 0.259459 0.118919 0.248649 0.383784 0.248649 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 Consensus sequence: SCMVBBGGC ************************************************************************ Best Matches for Motif ID 25 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0118.1 Macho-1 Reverse Complement Original Motif Backward 2 8 0.054300 Taxon: Urochordates Original motif 0.119048 0.357143 0.142857 0.380952 0.214286 0.047619 0.547619 0.190476 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.071429 0.095238 0.547619 0.285714 0.000000 0.000000 1.000000 0.000000 0.119048 0.166667 0.357143 0.357143 0.119048 0.333333 0.095238 0.452381 0.309524 0.333333 0.238095 0.119048 Consensus sequence: BGGGKGBYV Reverse complement motif 0.309524 0.238095 0.333333 0.119048 0.452381 0.333333 0.095238 0.119048 0.119048 0.357143 0.166667 0.357143 0.000000 1.000000 0.000000 0.000000 0.071429 0.547619 0.095238 0.285714 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.214286 0.547619 0.047619 0.190476 0.380952 0.357143 0.142857 0.119048 Consensus sequence: VMBCYCCCV Alignment: -BGGGKGBYV SCMVBBGGC- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 26 Motif name: MIZF Original motif 0.100000 0.300000 0.250000 0.350000 0.650000 0.050000 0.000000 0.300000 1.000000 0.000000 0.000000 0.000000 0.100000 0.850000 0.050000 0.000000 0.000000 0.000000 0.950000 0.050000 0.000000 0.050000 0.000000 0.950000 0.000000 0.950000 0.000000 0.050000 0.000000 0.900000 0.100000 0.000000 0.000000 0.000000 0.950000 0.050000 0.100000 0.650000 0.050000 0.200000 Consensus sequence: BAACGTCCGC Reserve complement motif 0.100000 0.050000 0.650000 0.200000 0.000000 0.950000 0.000000 0.050000 0.000000 0.100000 0.900000 0.000000 0.000000 0.000000 0.950000 0.050000 0.950000 0.050000 0.000000 0.000000 0.000000 0.950000 0.000000 0.050000 0.100000 0.050000 0.850000 0.000000 0.000000 0.000000 0.000000 1.000000 0.300000 0.050000 0.000000 0.650000 0.350000 0.300000 0.250000 0.100000 Consensus sequence: GCGGACGTTV ************************************************************************ Best Matches for Motif ID 26 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0118.1 Macho-1 Reverse Complement Original Motif Forward 2 9 0.000000 Taxon: Urochordates Original motif 0.119048 0.357143 0.142857 0.380952 0.214286 0.047619 0.547619 0.190476 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.071429 0.095238 0.547619 0.285714 0.000000 0.000000 1.000000 0.000000 0.119048 0.166667 0.357143 0.357143 0.119048 0.333333 0.095238 0.452381 0.309524 0.333333 0.238095 0.119048 Consensus sequence: BGGGKGBYV Reverse complement motif 0.309524 0.238095 0.333333 0.119048 0.452381 0.333333 0.095238 0.119048 0.119048 0.357143 0.166667 0.357143 0.000000 1.000000 0.000000 0.000000 0.071429 0.547619 0.095238 0.285714 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.214286 0.547619 0.047619 0.190476 0.380952 0.357143 0.142857 0.119048 Consensus sequence: VMBCYCCCV Alignment: VMBCYCCCV- -GCGGACGTTV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 27 Motif name: Klf4 Original motif 0.338561 0.018681 0.235701 0.407057 0.020276 0.002074 0.976267 0.001382 0.003223 0.002993 0.990792 0.002993 0.003221 0.008282 0.984817 0.003681 0.063693 0.441941 0.002529 0.491837 0.005064 0.003453 0.983656 0.007827 0.009671 0.018420 0.501727 0.470182 0.060872 0.010606 0.899700 0.028822 0.028400 0.030016 0.874856 0.066728 0.058742 0.660962 0.064755 0.215541 Consensus sequence: DGGGYGKGGC Reserve complement motif 0.058742 0.064755 0.660962 0.215541 0.028400 0.874856 0.030016 0.066728 0.060872 0.899700 0.010606 0.028822 0.009671 0.501727 0.018420 0.470182 0.005064 0.983656 0.003453 0.007827 0.491837 0.441941 0.002529 0.063693 0.003221 0.984817 0.008282 0.003681 0.003223 0.990792 0.002993 0.002993 0.020276 0.976267 0.002074 0.001382 0.407057 0.018681 0.235701 0.338561 Consensus sequence: GCCYCMCCCD ************************************************************************ Best Matches for Motif ID 27 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0118.1 Macho-1 Reverse Complement Reverse Complement Backward 1 9 0.000000 Taxon: Urochordates Original motif 0.119048 0.357143 0.142857 0.380952 0.214286 0.047619 0.547619 0.190476 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.071429 0.095238 0.547619 0.285714 0.000000 0.000000 1.000000 0.000000 0.119048 0.166667 0.357143 0.357143 0.119048 0.333333 0.095238 0.452381 0.309524 0.333333 0.238095 0.119048 Consensus sequence: BGGGKGBYV Reverse complement motif 0.309524 0.238095 0.333333 0.119048 0.452381 0.333333 0.095238 0.119048 0.119048 0.357143 0.166667 0.357143 0.000000 1.000000 0.000000 0.000000 0.071429 0.547619 0.095238 0.285714 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.214286 0.547619 0.047619 0.190476 0.380952 0.357143 0.142857 0.119048 Consensus sequence: VMBCYCCCV Alignment: -VMBCYCCCV GCCYCMCCCD ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 28 Motif name: E2F1 Original motif 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.400000 0.600000 0.000000 0.000000 0.200000 0.800000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.900000 0.100000 0.000000 Consensus sequence: TTTSGCGC Reserve complement motif 0.000000 0.100000 0.900000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.800000 0.200000 0.000000 0.000000 0.600000 0.400000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 Consensus sequence: GCGCSAAA ************************************************************************ Best Matches for Motif ID 28 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0118.1 Macho-1 Reverse Complement Original Motif Forward 4 6 0.000000 Taxon: Urochordates Original motif 0.119048 0.357143 0.142857 0.380952 0.214286 0.047619 0.547619 0.190476 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.071429 0.095238 0.547619 0.285714 0.000000 0.000000 1.000000 0.000000 0.119048 0.166667 0.357143 0.357143 0.119048 0.333333 0.095238 0.452381 0.309524 0.333333 0.238095 0.119048 Consensus sequence: BGGGKGBYV Reverse complement motif 0.309524 0.238095 0.333333 0.119048 0.452381 0.333333 0.095238 0.119048 0.119048 0.357143 0.166667 0.357143 0.000000 1.000000 0.000000 0.000000 0.071429 0.547619 0.095238 0.285714 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.214286 0.547619 0.047619 0.190476 0.380952 0.357143 0.142857 0.119048 Consensus sequence: VMBCYCCCV Alignment: BGGGKGBYV-- ---GCGCSAAA ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 29 Motif name: HIF1AARNT Original motif 0.259615 0.269231 0.471154 0.000000 0.096154 0.278846 0.326923 0.298077 0.750000 0.019231 0.221154 0.009615 0.000000 0.990385 0.000000 0.009615 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.173077 0.490385 0.192308 0.144231 Consensus sequence: VBACGTGV Reserve complement motif 0.173077 0.192308 0.490385 0.144231 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.990385 0.009615 0.009615 0.019231 0.221154 0.750000 0.096154 0.326923 0.278846 0.298077 0.259615 0.471154 0.269231 0.000000 Consensus sequence: VCACGTBV ************************************************************************ Best Matches for Motif ID 29 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0118.1 Macho-1 Reverse Complement Original Motif Backward 1 8 0.018468 Taxon: Urochordates Original motif 0.119048 0.357143 0.142857 0.380952 0.214286 0.047619 0.547619 0.190476 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.071429 0.095238 0.547619 0.285714 0.000000 0.000000 1.000000 0.000000 0.119048 0.166667 0.357143 0.357143 0.119048 0.333333 0.095238 0.452381 0.309524 0.333333 0.238095 0.119048 Consensus sequence: BGGGKGBYV Reverse complement motif 0.309524 0.238095 0.333333 0.119048 0.452381 0.333333 0.095238 0.119048 0.119048 0.357143 0.166667 0.357143 0.000000 1.000000 0.000000 0.000000 0.071429 0.547619 0.095238 0.285714 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.214286 0.547619 0.047619 0.190476 0.380952 0.357143 0.142857 0.119048 Consensus sequence: VMBCYCCCV Alignment: BGGGKGBYV -VCACGTBV ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 30 Motif name: PLAG1 Original motif 0.000000 0.000000 1.000000 0.000000 0.166667 0.000000 0.777778 0.055556 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.944444 0.055556 0.000000 0.777778 0.222222 0.000000 0.000000 0.833333 0.055556 0.111111 0.222222 0.555556 0.055556 0.166667 0.666667 0.000000 0.000000 0.333333 0.611111 0.277778 0.111111 0.000000 0.111111 0.000000 0.777778 0.111111 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.888889 0.111111 0.111111 0.000000 0.888889 0.000000 Consensus sequence: GGGGCCCAAGGGGG Reserve complement motif 0.111111 0.888889 0.000000 0.000000 0.000000 0.888889 0.000000 0.111111 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.111111 0.777778 0.000000 0.111111 0.000000 0.277778 0.111111 0.611111 0.333333 0.000000 0.000000 0.666667 0.222222 0.055556 0.555556 0.166667 0.000000 0.055556 0.833333 0.111111 0.000000 0.222222 0.777778 0.000000 0.000000 0.944444 0.000000 0.055556 0.000000 1.000000 0.000000 0.000000 0.166667 0.777778 0.000000 0.055556 0.000000 1.000000 0.000000 0.000000 Consensus sequence: CCCCCTTGGGCCCC ************************************************************************ Best Matches for Motif ID 30 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0118.1 Macho-1 Original Motif Original Motif Forward 1 9 0.065256 Taxon: Urochordates Original motif 0.119048 0.357143 0.142857 0.380952 0.214286 0.047619 0.547619 0.190476 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.071429 0.095238 0.547619 0.285714 0.000000 0.000000 1.000000 0.000000 0.119048 0.166667 0.357143 0.357143 0.119048 0.333333 0.095238 0.452381 0.309524 0.333333 0.238095 0.119048 Consensus sequence: BGGGKGBYV Reverse complement motif 0.309524 0.238095 0.333333 0.119048 0.452381 0.333333 0.095238 0.119048 0.119048 0.357143 0.166667 0.357143 0.000000 1.000000 0.000000 0.000000 0.071429 0.547619 0.095238 0.285714 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.214286 0.547619 0.047619 0.190476 0.380952 0.357143 0.142857 0.119048 Consensus sequence: VMBCYCCCV Alignment: BGGGKGBYV----- GGGGCCCAAGGGGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 31 Motif name: Pax5 Original motif 0.333333 0.083333 0.333333 0.250000 0.333333 0.000000 0.666667 0.000000 0.333333 0.250000 0.250000 0.166667 0.083333 0.166667 0.416667 0.333333 0.166667 0.583333 0.083333 0.166667 0.583333 0.166667 0.083333 0.166667 0.166667 0.416667 0.250000 0.166667 0.000000 0.250000 0.166667 0.583333 0.083333 0.166667 0.666667 0.083333 0.500000 0.083333 0.250000 0.166667 0.500000 0.000000 0.166667 0.333333 0.000000 0.000000 1.000000 0.000000 0.166667 0.666667 0.083333 0.083333 0.250000 0.000000 0.750000 0.000000 0.083333 0.000000 0.333333 0.583333 0.500000 0.083333 0.416667 0.000000 0.416667 0.083333 0.416667 0.083333 0.166667 0.833333 0.000000 0.000000 0.166667 0.416667 0.416667 0.000000 0.416667 0.000000 0.500000 0.083333 Consensus sequence: DGVBCABTGDWGCGKRRCSR Reserve complement motif 0.416667 0.500000 0.000000 0.083333 0.166667 0.416667 0.416667 0.000000 0.166667 0.000000 0.833333 0.000000 0.083333 0.083333 0.416667 0.416667 0.000000 0.083333 0.416667 0.500000 0.583333 0.000000 0.333333 0.083333 0.250000 0.750000 0.000000 0.000000 0.166667 0.083333 0.666667 0.083333 0.000000 1.000000 0.000000 0.000000 0.333333 0.000000 0.166667 0.500000 0.166667 0.083333 0.250000 0.500000 0.083333 0.666667 0.166667 0.083333 0.583333 0.250000 0.166667 0.000000 0.166667 0.250000 0.416667 0.166667 0.166667 0.166667 0.083333 0.583333 0.166667 0.083333 0.583333 0.166667 0.083333 0.416667 0.166667 0.333333 0.166667 0.250000 0.250000 0.333333 0.333333 0.666667 0.000000 0.000000 0.250000 0.083333 0.333333 0.333333 Consensus sequence: MSGKKRCGCWDCABTGBBCD ************************************************************************ Best Matches for Motif ID 31 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0118.1 Macho-1 Original Motif Original Motif Backward 4 9 0.030225 Taxon: Urochordates Original motif 0.119048 0.357143 0.142857 0.380952 0.214286 0.047619 0.547619 0.190476 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.071429 0.095238 0.547619 0.285714 0.000000 0.000000 1.000000 0.000000 0.119048 0.166667 0.357143 0.357143 0.119048 0.333333 0.095238 0.452381 0.309524 0.333333 0.238095 0.119048 Consensus sequence: BGGGKGBYV Reverse complement motif 0.309524 0.238095 0.333333 0.119048 0.452381 0.333333 0.095238 0.119048 0.119048 0.357143 0.166667 0.357143 0.000000 1.000000 0.000000 0.000000 0.071429 0.547619 0.095238 0.285714 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.214286 0.547619 0.047619 0.190476 0.380952 0.357143 0.142857 0.119048 Consensus sequence: VMBCYCCCV Alignment: -----------BGGGKGBYV DGVBCABTGDWGCGKRRCSR--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 32 Motif name: ArntAhr Original motif 0.125000 0.333333 0.083333 0.458333 0.000000 0.000000 0.958333 0.041667 0.000000 0.958333 0.000000 0.041667 0.000000 0.000000 0.958333 0.041667 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 Consensus sequence: YGCGTG Reserve complement motif 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.958333 0.000000 0.041667 0.000000 0.000000 0.958333 0.041667 0.000000 0.958333 0.000000 0.041667 0.458333 0.333333 0.083333 0.125000 Consensus sequence: CACGCM ************************************************************************ Best Matches for Motif ID 32 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0118.1 Macho-1 Original Motif Original Motif Forward 1 6 0.000000 Taxon: Urochordates Original motif 0.119048 0.357143 0.142857 0.380952 0.214286 0.047619 0.547619 0.190476 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.071429 0.095238 0.547619 0.285714 0.000000 0.000000 1.000000 0.000000 0.119048 0.166667 0.357143 0.357143 0.119048 0.333333 0.095238 0.452381 0.309524 0.333333 0.238095 0.119048 Consensus sequence: BGGGKGBYV Reverse complement motif 0.309524 0.238095 0.333333 0.119048 0.452381 0.333333 0.095238 0.119048 0.119048 0.357143 0.166667 0.357143 0.000000 1.000000 0.000000 0.000000 0.071429 0.547619 0.095238 0.285714 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.214286 0.547619 0.047619 0.190476 0.380952 0.357143 0.142857 0.119048 Consensus sequence: VMBCYCCCV Alignment: BGGGKGBYV YGCGTG--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 33 Motif name: Mycn Original motif 0.349315 0.363014 0.143836 0.143836 0.089041 0.388128 0.447489 0.075342 0.015982 0.984018 0.000000 0.000000 0.945205 0.000000 0.041096 0.013699 0.000000 0.961187 0.018265 0.020548 0.070776 0.002283 0.924658 0.002283 0.054795 0.221461 0.004566 0.719178 0.000000 0.000000 0.938356 0.061644 0.061644 0.111872 0.739726 0.086758 0.139269 0.605023 0.091324 0.164384 Consensus sequence: HSCACGTGGC Reserve complement motif 0.139269 0.091324 0.605023 0.164384 0.061644 0.739726 0.111872 0.086758 0.000000 0.938356 0.000000 0.061644 0.719178 0.221461 0.004566 0.054795 0.070776 0.924658 0.002283 0.002283 0.000000 0.018265 0.961187 0.020548 0.013699 0.000000 0.041096 0.945205 0.015982 0.000000 0.984018 0.000000 0.089041 0.447489 0.388128 0.075342 0.349315 0.143836 0.363014 0.143836 Consensus sequence: GCCACGTGSD ************************************************************************ Best Matches for Motif ID 33 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0118.1 Macho-1 Original Motif Reverse Complement Forward 2 8 0.015945 Taxon: Urochordates Original motif 0.119048 0.357143 0.142857 0.380952 0.214286 0.047619 0.547619 0.190476 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.071429 0.095238 0.547619 0.285714 0.000000 0.000000 1.000000 0.000000 0.119048 0.166667 0.357143 0.357143 0.119048 0.333333 0.095238 0.452381 0.309524 0.333333 0.238095 0.119048 Consensus sequence: BGGGKGBYV Reverse complement motif 0.309524 0.238095 0.333333 0.119048 0.452381 0.333333 0.095238 0.119048 0.119048 0.357143 0.166667 0.357143 0.000000 1.000000 0.000000 0.000000 0.071429 0.547619 0.095238 0.285714 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.214286 0.547619 0.047619 0.190476 0.380952 0.357143 0.142857 0.119048 Consensus sequence: VMBCYCCCV Alignment: VMBCYCCCV-- -HSCACGTGGC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 34 Motif name: Myc Original motif 0.295154 0.422907 0.158590 0.123348 0.149780 0.233480 0.572687 0.044053 0.035242 0.964758 0.000000 0.000000 0.955947 0.017621 0.022026 0.004405 0.000000 0.933921 0.013216 0.052863 0.083700 0.008811 0.898678 0.008811 0.039648 0.193833 0.000000 0.766520 0.000000 0.008811 0.951542 0.039648 0.000000 0.074890 0.806167 0.118943 0.198238 0.471366 0.105727 0.224670 Consensus sequence: VGCACGTGGH Reserve complement motif 0.198238 0.105727 0.471366 0.224670 0.000000 0.806167 0.074890 0.118943 0.000000 0.951542 0.008811 0.039648 0.766520 0.193833 0.000000 0.039648 0.083700 0.898678 0.008811 0.008811 0.000000 0.013216 0.933921 0.052863 0.004405 0.017621 0.022026 0.955947 0.035242 0.000000 0.964758 0.000000 0.149780 0.572687 0.233480 0.044053 0.295154 0.158590 0.422907 0.123348 Consensus sequence: DCCACGTGCV ************************************************************************ Best Matches for Motif ID 34 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0118.1 Macho-1 Original Motif Original Motif Forward 3 8 0.024987 Taxon: Urochordates Original motif 0.119048 0.357143 0.142857 0.380952 0.214286 0.047619 0.547619 0.190476 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.071429 0.095238 0.547619 0.285714 0.000000 0.000000 1.000000 0.000000 0.119048 0.166667 0.357143 0.357143 0.119048 0.333333 0.095238 0.452381 0.309524 0.333333 0.238095 0.119048 Consensus sequence: BGGGKGBYV Reverse complement motif 0.309524 0.238095 0.333333 0.119048 0.452381 0.333333 0.095238 0.119048 0.119048 0.357143 0.166667 0.357143 0.000000 1.000000 0.000000 0.000000 0.071429 0.547619 0.095238 0.285714 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.214286 0.547619 0.047619 0.190476 0.380952 0.357143 0.142857 0.119048 Consensus sequence: VMBCYCCCV Alignment: BGGGKGBYV-- --VGCACGTGGH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 3 Motif ID: 35 Motif name: GABPA Original motif 0.032356 0.776542 0.190091 0.001011 0.070779 0.924166 0.004044 0.001011 0.000000 0.000000 0.998991 0.001009 0.000000 0.000000 1.000000 0.000000 0.997986 0.001007 0.001007 0.000000 0.995972 0.002014 0.000000 0.002014 0.094758 0.032258 0.872984 0.000000 0.056509 0.263370 0.037336 0.642785 0.155556 0.138384 0.609091 0.096970 0.266667 0.264646 0.419192 0.049495 0.235354 0.360606 0.226263 0.177778 Consensus sequence: CCGGAAGTGVV Reserve complement motif 0.235354 0.226263 0.360606 0.177778 0.266667 0.419192 0.264646 0.049495 0.155556 0.609091 0.138384 0.096970 0.642785 0.263370 0.037336 0.056509 0.094758 0.872984 0.032258 0.000000 0.002014 0.002014 0.000000 0.995972 0.000000 0.001007 0.001007 0.997986 0.000000 1.000000 0.000000 0.000000 0.000000 0.998991 0.000000 0.001009 0.070779 0.004044 0.924166 0.001011 0.032356 0.190091 0.776542 0.001011 Consensus sequence: VVCACTTCCGG ************************************************************************ Best Matches for Motif ID 35 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0118.1 Macho-1 Reverse Complement Reverse Complement Forward 2 9 0.005673 Taxon: Urochordates Original motif 0.119048 0.357143 0.142857 0.380952 0.214286 0.047619 0.547619 0.190476 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.071429 0.095238 0.547619 0.285714 0.000000 0.000000 1.000000 0.000000 0.119048 0.166667 0.357143 0.357143 0.119048 0.333333 0.095238 0.452381 0.309524 0.333333 0.238095 0.119048 Consensus sequence: BGGGKGBYV Reverse complement motif 0.309524 0.238095 0.333333 0.119048 0.452381 0.333333 0.095238 0.119048 0.119048 0.357143 0.166667 0.357143 0.000000 1.000000 0.000000 0.000000 0.071429 0.547619 0.095238 0.285714 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.214286 0.547619 0.047619 0.190476 0.380952 0.357143 0.142857 0.119048 Consensus sequence: VMBCYCCCV Alignment: VMBCYCCCV-- -VVCACTTCCGG ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 36 Motif name: csGCCCCGCCCCsc Original motif 0.179104 0.492537 0.164179 0.164179 0.223881 0.402985 0.283582 0.089552 0.014925 0.014925 0.895522 0.074627 0.000000 0.895522 0.089552 0.014925 0.000000 0.925373 0.014925 0.059701 0.029851 0.970149 0.000000 0.000000 0.000000 0.970149 0.029851 0.000000 0.044776 0.000000 0.940299 0.014925 0.000000 0.955224 0.014925 0.029851 0.029851 0.955224 0.014925 0.000000 0.029851 0.925373 0.014925 0.029851 0.119403 0.820896 0.014925 0.044776 0.104478 0.328358 0.373134 0.194030 0.179104 0.358209 0.223881 0.238806 Consensus sequence: HVGCCCCGCCCCBB Reserve complement motif 0.179104 0.223881 0.358209 0.238806 0.104478 0.373134 0.328358 0.194030 0.119403 0.014925 0.820896 0.044776 0.029851 0.014925 0.925373 0.029851 0.029851 0.014925 0.955224 0.000000 0.000000 0.014925 0.955224 0.029851 0.044776 0.940299 0.000000 0.014925 0.000000 0.029851 0.970149 0.000000 0.029851 0.000000 0.970149 0.000000 0.000000 0.014925 0.925373 0.059701 0.000000 0.089552 0.895522 0.014925 0.014925 0.895522 0.014925 0.074627 0.223881 0.283582 0.402985 0.089552 0.179104 0.164179 0.492537 0.164179 Consensus sequence: BBGGGGCGGGGCVD ************************************************************************ Best Matches for Motif ID 36 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0118.1 Macho-1 Original Motif Reverse Complement Forward 1 9 0.000000 Taxon: Urochordates Original motif 0.119048 0.357143 0.142857 0.380952 0.214286 0.047619 0.547619 0.190476 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.071429 0.095238 0.547619 0.285714 0.000000 0.000000 1.000000 0.000000 0.119048 0.166667 0.357143 0.357143 0.119048 0.333333 0.095238 0.452381 0.309524 0.333333 0.238095 0.119048 Consensus sequence: BGGGKGBYV Reverse complement motif 0.309524 0.238095 0.333333 0.119048 0.452381 0.333333 0.095238 0.119048 0.119048 0.357143 0.166667 0.357143 0.000000 1.000000 0.000000 0.000000 0.071429 0.547619 0.095238 0.285714 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.214286 0.547619 0.047619 0.190476 0.380952 0.357143 0.142857 0.119048 Consensus sequence: VMBCYCCCV Alignment: VMBCYCCCV----- HVGCCCCGCCCCBB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 38 Motif name: cccGCCCCGCCCCsb Original motif 0.148936 0.425532 0.234043 0.191489 0.106383 0.553191 0.170213 0.170213 0.106383 0.659574 0.148936 0.085106 0.042553 0.000000 0.851064 0.106383 0.000000 0.936170 0.063830 0.000000 0.000000 0.872340 0.042553 0.085106 0.000000 1.000000 0.000000 0.000000 0.000000 0.957447 0.042553 0.000000 0.021277 0.021277 0.957447 0.000000 0.000000 0.957447 0.021277 0.021277 0.042553 0.936170 0.021277 0.000000 0.021277 0.957447 0.021277 0.000000 0.063830 0.914894 0.021277 0.000000 0.063830 0.297872 0.404255 0.234043 0.148936 0.319149 0.255319 0.276596 Consensus sequence: BCCGCCCCGCCCCBB Reserve complement motif 0.148936 0.255319 0.319149 0.276596 0.063830 0.404255 0.297872 0.234043 0.063830 0.021277 0.914894 0.000000 0.021277 0.021277 0.957447 0.000000 0.042553 0.021277 0.936170 0.000000 0.000000 0.021277 0.957447 0.021277 0.021277 0.957447 0.021277 0.000000 0.000000 0.042553 0.957447 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.042553 0.872340 0.085106 0.000000 0.063830 0.936170 0.000000 0.042553 0.851064 0.000000 0.106383 0.106383 0.148936 0.659574 0.085106 0.106383 0.170213 0.553191 0.170213 0.148936 0.234043 0.425532 0.191489 Consensus sequence: BBGGGGCGGGGCGGB ************************************************************************ Best Matches for Motif ID 38 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0118.1 Macho-1 Original Motif Reverse Complement Backward 6 9 0.004804 Taxon: Urochordates Original motif 0.119048 0.357143 0.142857 0.380952 0.214286 0.047619 0.547619 0.190476 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.071429 0.095238 0.547619 0.285714 0.000000 0.000000 1.000000 0.000000 0.119048 0.166667 0.357143 0.357143 0.119048 0.333333 0.095238 0.452381 0.309524 0.333333 0.238095 0.119048 Consensus sequence: BGGGKGBYV Reverse complement motif 0.309524 0.238095 0.333333 0.119048 0.452381 0.333333 0.095238 0.119048 0.119048 0.357143 0.166667 0.357143 0.000000 1.000000 0.000000 0.000000 0.071429 0.547619 0.095238 0.285714 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.214286 0.547619 0.047619 0.190476 0.380952 0.357143 0.142857 0.119048 Consensus sequence: VMBCYCCCV Alignment: ------BGGGKGBYV BCCGCCCCGCCCCBB----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 39 Motif name: kCAGCCAATmr Original motif 0.235294 0.176471 0.294118 0.294118 0.117647 0.705882 0.176471 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.352941 0.352941 0.235294 0.058824 0.352941 0.176471 0.411765 0.058824 Consensus sequence: DCAGCCAATVR Reserve complement motif 0.352941 0.411765 0.176471 0.058824 0.058824 0.352941 0.235294 0.352941 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.117647 0.176471 0.705882 0.000000 0.235294 0.294118 0.176471 0.294118 Consensus sequence: MBATTGGCTGH ************************************************************************ Best Matches for Motif ID 39 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0118.1 Macho-1 Reverse Complement Original Motif Forward 4 8 0.002845 Taxon: Urochordates Original motif 0.119048 0.357143 0.142857 0.380952 0.214286 0.047619 0.547619 0.190476 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.071429 0.095238 0.547619 0.285714 0.000000 0.000000 1.000000 0.000000 0.119048 0.166667 0.357143 0.357143 0.119048 0.333333 0.095238 0.452381 0.309524 0.333333 0.238095 0.119048 Consensus sequence: BGGGKGBYV Reverse complement motif 0.309524 0.238095 0.333333 0.119048 0.452381 0.333333 0.095238 0.119048 0.119048 0.357143 0.166667 0.357143 0.000000 1.000000 0.000000 0.000000 0.071429 0.547619 0.095238 0.285714 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.214286 0.547619 0.047619 0.190476 0.380952 0.357143 0.142857 0.119048 Consensus sequence: VMBCYCCCV Alignment: VMBCYCCCV--- ---MBATTGGCTGH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 40 Motif name: kcACCTGCAgc Original motif 0.153846 0.230769 0.307692 0.307692 0.153846 0.538462 0.153846 0.153846 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.153846 0.230769 0.461538 0.153846 0.153846 0.615385 0.153846 0.076923 Consensus sequence: BCACCTGCABC Reserve complement motif 0.153846 0.153846 0.615385 0.076923 0.153846 0.461538 0.230769 0.153846 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.153846 0.153846 0.538462 0.153846 0.153846 0.307692 0.230769 0.307692 Consensus sequence: GBTGCAGGTGB ************************************************************************ Best Matches for Motif ID 40 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0118.1 Macho-1 Original Motif Reverse Complement Forward 2 9 0.022349 Taxon: Urochordates Original motif 0.119048 0.357143 0.142857 0.380952 0.214286 0.047619 0.547619 0.190476 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.071429 0.095238 0.547619 0.285714 0.000000 0.000000 1.000000 0.000000 0.119048 0.166667 0.357143 0.357143 0.119048 0.333333 0.095238 0.452381 0.309524 0.333333 0.238095 0.119048 Consensus sequence: BGGGKGBYV Reverse complement motif 0.309524 0.238095 0.333333 0.119048 0.452381 0.333333 0.095238 0.119048 0.119048 0.357143 0.166667 0.357143 0.000000 1.000000 0.000000 0.000000 0.071429 0.547619 0.095238 0.285714 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.214286 0.547619 0.047619 0.190476 0.380952 0.357143 0.142857 0.119048 Consensus sequence: VMBCYCCCV Alignment: BGGGKGBYV-- -BCACCTGCABC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 4 Motif ID: 42 Motif name: sSGTCACGTGACSs Original motif 0.055556 0.388889 0.388889 0.166667 0.000000 0.277778 0.722222 0.000000 0.055556 0.111111 0.833333 0.000000 0.111111 0.000000 0.055556 0.833333 0.000000 0.888889 0.111111 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.944444 0.055556 0.000000 0.000000 0.055556 0.944444 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.111111 0.888889 0.000000 0.833333 0.055556 0.000000 0.111111 0.000000 0.833333 0.111111 0.055556 0.000000 0.722222 0.277778 0.000000 0.166667 0.388889 0.388889 0.055556 Consensus sequence: SGGTCACGTGACCS Reserve complement motif 0.166667 0.388889 0.388889 0.055556 0.000000 0.277778 0.722222 0.000000 0.000000 0.111111 0.833333 0.055556 0.111111 0.055556 0.000000 0.833333 0.000000 0.888889 0.111111 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.944444 0.055556 0.000000 0.000000 0.055556 0.944444 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.111111 0.888889 0.000000 0.833333 0.000000 0.055556 0.111111 0.055556 0.833333 0.111111 0.000000 0.000000 0.722222 0.277778 0.000000 0.055556 0.388889 0.388889 0.166667 Consensus sequence: SGGTCACGTGACCS ************************************************************************ Best Matches for Motif ID 42 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0118.1 Macho-1 Original Motif Original Motif Forward 4 6 0.020503 Taxon: Urochordates Original motif 0.119048 0.357143 0.142857 0.380952 0.214286 0.047619 0.547619 0.190476 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.071429 0.095238 0.547619 0.285714 0.000000 0.000000 1.000000 0.000000 0.119048 0.166667 0.357143 0.357143 0.119048 0.333333 0.095238 0.452381 0.309524 0.333333 0.238095 0.119048 Consensus sequence: BGGGKGBYV Reverse complement motif 0.309524 0.238095 0.333333 0.119048 0.452381 0.333333 0.095238 0.119048 0.119048 0.357143 0.166667 0.357143 0.000000 1.000000 0.000000 0.000000 0.071429 0.547619 0.095238 0.285714 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.214286 0.547619 0.047619 0.190476 0.380952 0.357143 0.142857 0.119048 Consensus sequence: VMBCYCCCV Alignment: BGGGKGBYV-------- ---SGGTCACGTGACCS ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 46 Motif name: TFW1 Original motif 0.000000 0.082495 0.917505 0.000000 0.074447 0.217304 0.197183 0.511066 0.000000 0.897384 0.102616 0.000000 0.050302 0.102616 0.847082 0.000000 0.000000 0.949698 0.050302 0.000000 0.000000 0.052314 0.947686 0.000000 Consensus sequence: GTCGCG Reserve complement motif 0.000000 0.947686 0.052314 0.000000 0.000000 0.050302 0.949698 0.000000 0.050302 0.847082 0.102616 0.000000 0.000000 0.102616 0.897384 0.000000 0.511066 0.217304 0.197183 0.074447 0.000000 0.917505 0.082495 0.000000 Consensus sequence: CGCGAC ************************************************************************ Best Matches for Motif ID 46 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0118.1 Macho-1 Original Motif Reverse Complement Forward 2 6 0.027414 Taxon: Urochordates Original motif 0.119048 0.357143 0.142857 0.380952 0.214286 0.047619 0.547619 0.190476 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.071429 0.095238 0.547619 0.285714 0.000000 0.000000 1.000000 0.000000 0.119048 0.166667 0.357143 0.357143 0.119048 0.333333 0.095238 0.452381 0.309524 0.333333 0.238095 0.119048 Consensus sequence: BGGGKGBYV Reverse complement motif 0.309524 0.238095 0.333333 0.119048 0.452381 0.333333 0.095238 0.119048 0.119048 0.357143 0.166667 0.357143 0.000000 1.000000 0.000000 0.000000 0.071429 0.547619 0.095238 0.285714 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.214286 0.547619 0.047619 0.190476 0.380952 0.357143 0.142857 0.119048 Consensus sequence: VMBCYCCCV Alignment: VMBCYCCCV -GTCGCG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 47 Motif name: TFW2 Original motif 0.005831 0.364431 0.416910 0.212828 0.081633 0.816327 0.099125 0.002915 0.002915 0.067055 0.921283 0.008746 0.005831 0.883382 0.107872 0.002915 0.000000 0.096210 0.860058 0.043732 0.002915 0.906706 0.078717 0.011662 0.043732 0.075802 0.825073 0.055394 0.000000 0.125364 0.871720 0.002915 Consensus sequence: SCGCGCGG Reserve complement motif 0.000000 0.871720 0.125364 0.002915 0.043732 0.825073 0.075802 0.055394 0.002915 0.078717 0.906706 0.011662 0.000000 0.860058 0.096210 0.043732 0.005831 0.107872 0.883382 0.002915 0.002915 0.921283 0.067055 0.008746 0.081633 0.099125 0.816327 0.002915 0.005831 0.416910 0.364431 0.212828 Consensus sequence: CCGCGCGS ************************************************************************ Best Matches for Motif ID 47 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0118.1 Macho-1 Reverse Complement Original Motif Forward 2 7 0.008273 Taxon: Urochordates Original motif 0.119048 0.357143 0.142857 0.380952 0.214286 0.047619 0.547619 0.190476 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.071429 0.095238 0.547619 0.285714 0.000000 0.000000 1.000000 0.000000 0.119048 0.166667 0.357143 0.357143 0.119048 0.333333 0.095238 0.452381 0.309524 0.333333 0.238095 0.119048 Consensus sequence: BGGGKGBYV Reverse complement motif 0.309524 0.238095 0.333333 0.119048 0.452381 0.333333 0.095238 0.119048 0.119048 0.357143 0.166667 0.357143 0.000000 1.000000 0.000000 0.000000 0.071429 0.547619 0.095238 0.285714 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.214286 0.547619 0.047619 0.190476 0.380952 0.357143 0.142857 0.119048 Consensus sequence: VMBCYCCCV Alignment: VMBCYCCCV- -CCGCGCGS- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 48 Motif name: TFW3 Original motif 0.020000 0.920000 0.050000 0.010000 0.000000 0.030000 0.960000 0.010000 0.000000 0.170000 0.830000 0.000000 0.000000 0.990000 0.000000 0.010000 0.000000 0.270000 0.210000 0.520000 0.030000 0.300000 0.370000 0.300000 0.000000 0.950000 0.050000 0.000000 0.020000 0.130000 0.800000 0.050000 0.000000 0.880000 0.120000 0.000000 0.010000 0.220000 0.760000 0.010000 Consensus sequence: CGGCYBCGCG Reserve complement motif 0.010000 0.760000 0.220000 0.010000 0.000000 0.120000 0.880000 0.000000 0.020000 0.800000 0.130000 0.050000 0.000000 0.050000 0.950000 0.000000 0.030000 0.370000 0.300000 0.300000 0.520000 0.270000 0.210000 0.000000 0.000000 0.000000 0.990000 0.010000 0.000000 0.830000 0.170000 0.000000 0.000000 0.960000 0.030000 0.010000 0.020000 0.050000 0.920000 0.010000 Consensus sequence: CGCGBMGCCG ************************************************************************ Best Matches for Motif ID 48 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0118.1 Macho-1 Original Motif Reverse Complement Backward 3 7 0.008180 Taxon: Urochordates Original motif 0.119048 0.357143 0.142857 0.380952 0.214286 0.047619 0.547619 0.190476 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.071429 0.095238 0.547619 0.285714 0.000000 0.000000 1.000000 0.000000 0.119048 0.166667 0.357143 0.357143 0.119048 0.333333 0.095238 0.452381 0.309524 0.333333 0.238095 0.119048 Consensus sequence: BGGGKGBYV Reverse complement motif 0.309524 0.238095 0.333333 0.119048 0.452381 0.333333 0.095238 0.119048 0.119048 0.357143 0.166667 0.357143 0.000000 1.000000 0.000000 0.000000 0.071429 0.547619 0.095238 0.285714 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.214286 0.547619 0.047619 0.190476 0.380952 0.357143 0.142857 0.119048 Consensus sequence: VMBCYCCCV Alignment: ---VMBCYCCCV CGGCYBCGCG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 49 Motif name: TFF1 Original motif 0.180952 0.533333 0.142857 0.142857 0.019048 0.009524 0.952381 0.019048 0.019048 0.047619 0.914286 0.019048 0.400000 0.333333 0.219048 0.047619 0.028571 0.047619 0.885714 0.038095 0.038095 0.895238 0.009524 0.057143 0.133333 0.733333 0.066667 0.066667 0.038095 0.038095 0.876190 0.047619 0.123810 0.752381 0.114286 0.009524 0.314286 0.190476 0.390476 0.104762 0.123810 0.028571 0.771429 0.076190 0.057143 0.904762 0.028571 0.009524 Consensus sequence: CGGVGCCGCVGC Reserve complement motif 0.057143 0.028571 0.904762 0.009524 0.123810 0.771429 0.028571 0.076190 0.314286 0.390476 0.190476 0.104762 0.123810 0.114286 0.752381 0.009524 0.038095 0.876190 0.038095 0.047619 0.133333 0.066667 0.733333 0.066667 0.038095 0.009524 0.895238 0.057143 0.028571 0.885714 0.047619 0.038095 0.047619 0.333333 0.219048 0.400000 0.019048 0.914286 0.047619 0.019048 0.019048 0.952381 0.009524 0.019048 0.180952 0.142857 0.533333 0.142857 Consensus sequence: GCVGCGGCBCCG ************************************************************************ Best Matches for Motif ID 49 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0118.1 Macho-1 Reverse Complement Original Motif Backward 3 9 0.013872 Taxon: Urochordates Original motif 0.119048 0.357143 0.142857 0.380952 0.214286 0.047619 0.547619 0.190476 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.071429 0.095238 0.547619 0.285714 0.000000 0.000000 1.000000 0.000000 0.119048 0.166667 0.357143 0.357143 0.119048 0.333333 0.095238 0.452381 0.309524 0.333333 0.238095 0.119048 Consensus sequence: BGGGKGBYV Reverse complement motif 0.309524 0.238095 0.333333 0.119048 0.452381 0.333333 0.095238 0.119048 0.119048 0.357143 0.166667 0.357143 0.000000 1.000000 0.000000 0.000000 0.071429 0.547619 0.095238 0.285714 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.214286 0.547619 0.047619 0.190476 0.380952 0.357143 0.142857 0.119048 Consensus sequence: VMBCYCCCV Alignment: ---VMBCYCCCV GCVGCGGCBCCG-- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 50 Motif name: TFF11 Original motif 0.076190 0.085714 0.819048 0.019048 0.076190 0.066667 0.780952 0.076190 0.438095 0.323810 0.180952 0.057143 0.123810 0.180952 0.657143 0.038095 0.095238 0.076190 0.790476 0.038095 0.371429 0.104762 0.485714 0.038095 0.019048 0.038095 0.914286 0.028571 0.019048 0.095238 0.885714 0.000000 0.057143 0.866667 0.066667 0.009524 0.009524 0.009524 0.980952 0.000000 0.047619 0.104762 0.838095 0.009524 0.333333 0.161905 0.409524 0.095238 0.019048 0.009524 0.952381 0.019048 0.114286 0.580952 0.266667 0.038095 Consensus sequence: GGMGGRGGCGGVGC Reserve complement motif 0.114286 0.266667 0.580952 0.038095 0.019048 0.952381 0.009524 0.019048 0.333333 0.409524 0.161905 0.095238 0.047619 0.838095 0.104762 0.009524 0.009524 0.980952 0.009524 0.000000 0.057143 0.066667 0.866667 0.009524 0.019048 0.885714 0.095238 0.000000 0.019048 0.914286 0.038095 0.028571 0.371429 0.485714 0.104762 0.038095 0.095238 0.790476 0.076190 0.038095 0.123810 0.657143 0.180952 0.038095 0.057143 0.323810 0.180952 0.438095 0.076190 0.780952 0.066667 0.076190 0.076190 0.819048 0.085714 0.019048 Consensus sequence: GCVCCGCCMCCYCC ************************************************************************ Best Matches for Motif ID 50 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0118.1 Macho-1 Reverse Complement Reverse Complement Forward 2 9 0.005053 Taxon: Urochordates Original motif 0.119048 0.357143 0.142857 0.380952 0.214286 0.047619 0.547619 0.190476 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.071429 0.095238 0.547619 0.285714 0.000000 0.000000 1.000000 0.000000 0.119048 0.166667 0.357143 0.357143 0.119048 0.333333 0.095238 0.452381 0.309524 0.333333 0.238095 0.119048 Consensus sequence: BGGGKGBYV Reverse complement motif 0.309524 0.238095 0.333333 0.119048 0.452381 0.333333 0.095238 0.119048 0.119048 0.357143 0.166667 0.357143 0.000000 1.000000 0.000000 0.000000 0.071429 0.547619 0.095238 0.285714 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.214286 0.547619 0.047619 0.190476 0.380952 0.357143 0.142857 0.119048 Consensus sequence: VMBCYCCCV Alignment: VMBCYCCCV----- -GCVCCGCCMCCYCC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 51 Motif name: TFM2 Original motif 0.404762 0.047619 0.547619 0.000000 0.238095 0.119048 0.642857 0.000000 0.607143 0.071429 0.321429 0.000000 0.190476 0.000000 0.797619 0.011905 0.226190 0.000000 0.738095 0.035714 0.738095 0.000000 0.238095 0.023810 0.261905 0.142857 0.595238 0.000000 0.345238 0.071429 0.583333 0.000000 0.547619 0.000000 0.452381 0.000000 0.011905 0.000000 0.988095 0.000000 0.011905 0.309524 0.678571 0.000000 0.357143 0.261905 0.190476 0.190476 0.309524 0.000000 0.690476 0.000000 0.250000 0.095238 0.654762 0.000000 0.309524 0.047619 0.392857 0.250000 0.035714 0.095238 0.857143 0.011905 Consensus sequence: RGRGGAGRRGGHGGDG Reserve complement motif 0.035714 0.857143 0.095238 0.011905 0.309524 0.392857 0.047619 0.250000 0.250000 0.654762 0.095238 0.000000 0.309524 0.690476 0.000000 0.000000 0.190476 0.261905 0.190476 0.357143 0.011905 0.678571 0.309524 0.000000 0.011905 0.988095 0.000000 0.000000 0.000000 0.000000 0.452381 0.547619 0.345238 0.583333 0.071429 0.000000 0.261905 0.595238 0.142857 0.000000 0.023810 0.000000 0.238095 0.738095 0.226190 0.738095 0.000000 0.035714 0.190476 0.797619 0.000000 0.011905 0.000000 0.071429 0.321429 0.607143 0.238095 0.642857 0.119048 0.000000 0.404762 0.547619 0.047619 0.000000 Consensus sequence: CHCCBCCKMCTCCKCM ************************************************************************ Best Matches for Motif ID 51 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0118.1 Macho-1 Reverse Complement Reverse Complement Backward 8 9 0.011243 Taxon: Urochordates Original motif 0.119048 0.357143 0.142857 0.380952 0.214286 0.047619 0.547619 0.190476 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.071429 0.095238 0.547619 0.285714 0.000000 0.000000 1.000000 0.000000 0.119048 0.166667 0.357143 0.357143 0.119048 0.333333 0.095238 0.452381 0.309524 0.333333 0.238095 0.119048 Consensus sequence: BGGGKGBYV Reverse complement motif 0.309524 0.238095 0.333333 0.119048 0.452381 0.333333 0.095238 0.119048 0.119048 0.357143 0.166667 0.357143 0.000000 1.000000 0.000000 0.000000 0.071429 0.547619 0.095238 0.285714 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.214286 0.547619 0.047619 0.190476 0.380952 0.357143 0.142857 0.119048 Consensus sequence: VMBCYCCCV Alignment: -------VMBCYCCCV CHCCBCCKMCTCCKCM------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 54 Motif name: TFM12 Original motif 0.000000 1.000000 0.000000 0.000000 0.190000 0.400000 0.000000 0.410000 0.000000 0.520000 0.190000 0.290000 0.110000 0.610000 0.100000 0.180000 0.180000 0.290000 0.330000 0.200000 0.000000 0.380000 0.350000 0.270000 0.000000 0.820000 0.000000 0.180000 0.180000 0.390000 0.000000 0.430000 0.000000 0.530000 0.000000 0.470000 0.000000 0.470000 0.150000 0.380000 0.000000 0.240000 0.240000 0.520000 0.000000 0.870000 0.000000 0.130000 0.050000 0.680000 0.000000 0.270000 0.180000 0.380000 0.100000 0.340000 0.000000 0.620000 0.220000 0.160000 0.000000 0.660000 0.090000 0.250000 0.200000 0.150000 0.130000 0.520000 0.040000 0.460000 0.160000 0.340000 0.060000 0.530000 0.030000 0.380000 0.050000 0.570000 0.040000 0.340000 Consensus sequence: CYYCBBCYYYTCCHCCTYYY Reserve complement motif 0.050000 0.040000 0.570000 0.340000 0.060000 0.030000 0.530000 0.380000 0.040000 0.160000 0.460000 0.340000 0.520000 0.150000 0.130000 0.200000 0.000000 0.090000 0.660000 0.250000 0.000000 0.220000 0.620000 0.160000 0.180000 0.100000 0.380000 0.340000 0.050000 0.000000 0.680000 0.270000 0.000000 0.000000 0.870000 0.130000 0.520000 0.240000 0.240000 0.000000 0.000000 0.150000 0.470000 0.380000 0.000000 0.000000 0.530000 0.470000 0.430000 0.390000 0.000000 0.180000 0.000000 0.000000 0.820000 0.180000 0.000000 0.350000 0.380000 0.270000 0.180000 0.330000 0.290000 0.200000 0.110000 0.100000 0.610000 0.180000 0.000000 0.190000 0.520000 0.290000 0.410000 0.400000 0.000000 0.190000 0.000000 0.000000 1.000000 0.000000 Consensus sequence: KKKAGGDGGAKKMGBBGKMG ************************************************************************ Best Matches for Motif ID 54 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0118.1 Macho-1 Original Motif Reverse Complement Forward 6 9 0.010784 Taxon: Urochordates Original motif 0.119048 0.357143 0.142857 0.380952 0.214286 0.047619 0.547619 0.190476 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.071429 0.095238 0.547619 0.285714 0.000000 0.000000 1.000000 0.000000 0.119048 0.166667 0.357143 0.357143 0.119048 0.333333 0.095238 0.452381 0.309524 0.333333 0.238095 0.119048 Consensus sequence: BGGGKGBYV Reverse complement motif 0.309524 0.238095 0.333333 0.119048 0.452381 0.333333 0.095238 0.119048 0.119048 0.357143 0.166667 0.357143 0.000000 1.000000 0.000000 0.000000 0.071429 0.547619 0.095238 0.285714 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.214286 0.547619 0.047619 0.190476 0.380952 0.357143 0.142857 0.119048 Consensus sequence: VMBCYCCCV Alignment: BGGGKGBYV----------- -----CYYCBBCYYYTCCHCCTYYY ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 55 Motif name: TFM13 Original motif 0.666667 0.133333 0.000000 0.200000 0.066667 0.200000 0.000000 0.733333 0.200000 0.000000 0.333333 0.466667 0.666667 0.000000 0.000000 0.333333 0.666667 0.000000 0.000000 0.333333 0.600000 0.000000 0.000000 0.400000 0.333333 0.000000 0.000000 0.666667 0.000000 0.066667 0.000000 0.933333 0.133333 0.266667 0.000000 0.600000 0.266667 0.000000 0.000000 0.733333 0.466667 0.000000 0.466667 0.066667 0.600000 0.333333 0.000000 0.066667 0.800000 0.200000 0.000000 0.000000 0.666667 0.333333 0.000000 0.000000 0.133333 0.200000 0.200000 0.466667 0.800000 0.000000 0.200000 0.000000 0.466667 0.266667 0.066667 0.200000 0.400000 0.333333 0.000000 0.266667 0.200000 0.000000 0.000000 0.800000 0.600000 0.000000 0.000000 0.400000 Consensus sequence: ATKAAWTTTTRMAABAHHTW Reserve complement motif 0.400000 0.000000 0.000000 0.600000 0.800000 0.000000 0.000000 0.200000 0.266667 0.333333 0.000000 0.400000 0.200000 0.266667 0.066667 0.466667 0.000000 0.000000 0.200000 0.800000 0.466667 0.200000 0.200000 0.133333 0.000000 0.333333 0.000000 0.666667 0.000000 0.200000 0.000000 0.800000 0.066667 0.333333 0.000000 0.600000 0.066667 0.000000 0.466667 0.466667 0.733333 0.000000 0.000000 0.266667 0.600000 0.266667 0.000000 0.133333 0.933333 0.066667 0.000000 0.000000 0.666667 0.000000 0.000000 0.333333 0.400000 0.000000 0.000000 0.600000 0.333333 0.000000 0.000000 0.666667 0.333333 0.000000 0.000000 0.666667 0.466667 0.000000 0.333333 0.200000 0.733333 0.200000 0.000000 0.066667 0.200000 0.133333 0.000000 0.666667 Consensus sequence: WAHHTVTTYKAAAAWTTRAT ************************************************************************ Best Matches for Motif ID 55 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0118.1 Macho-1 Original Motif Reverse Complement Backward 6 4 0.000000 Taxon: Urochordates Original motif 0.119048 0.357143 0.142857 0.380952 0.214286 0.047619 0.547619 0.190476 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.071429 0.095238 0.547619 0.285714 0.000000 0.000000 1.000000 0.000000 0.119048 0.166667 0.357143 0.357143 0.119048 0.333333 0.095238 0.452381 0.309524 0.333333 0.238095 0.119048 Consensus sequence: BGGGKGBYV Reverse complement motif 0.309524 0.238095 0.333333 0.119048 0.452381 0.333333 0.095238 0.119048 0.119048 0.357143 0.166667 0.357143 0.000000 1.000000 0.000000 0.000000 0.071429 0.547619 0.095238 0.285714 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.214286 0.547619 0.047619 0.190476 0.380952 0.357143 0.142857 0.119048 Consensus sequence: VMBCYCCCV Alignment: ----------------VMBCYCCCV ATKAAWTTTTRMAABAHHTW----- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dataset #: 5 Motif ID: 56 Motif name: TFM11 Original motif 0.294118 0.235294 0.117647 0.352941 0.382353 0.205882 0.205882 0.205882 0.529412 0.000000 0.117647 0.352941 0.235294 0.294118 0.323529 0.147059 1.000000 0.000000 0.000000 0.000000 0.941176 0.000000 0.000000 0.058824 0.764706 0.000000 0.029412 0.205882 0.382353 0.235294 0.176471 0.205882 0.735294 0.000000 0.058824 0.205882 0.735294 0.029412 0.117647 0.117647 0.676471 0.000000 0.088235 0.235294 0.529412 0.117647 0.205882 0.147059 0.705882 0.176471 0.117647 0.000000 0.441176 0.352941 0.147059 0.058824 0.941176 0.058824 0.000000 0.000000 0.852941 0.000000 0.147059 0.000000 0.676471 0.088235 0.000000 0.235294 0.529412 0.323529 0.117647 0.029412 0.470588 0.176471 0.000000 0.352941 0.411765 0.000000 0.147059 0.441176 0.500000 0.088235 0.147059 0.264706 0.294118 0.205882 0.088235 0.411765 0.205882 0.235294 0.264706 0.294118 0.470588 0.000000 0.117647 0.411765 0.617647 0.176471 0.205882 0.000000 Consensus sequence: HDWVAAAHAAAAAMAAAMWWWHBWA Reserve complement motif 0.000000 0.176471 0.205882 0.617647 0.411765 0.000000 0.117647 0.470588 0.294118 0.235294 0.264706 0.205882 0.411765 0.205882 0.088235 0.294118 0.264706 0.088235 0.147059 0.500000 0.441176 0.000000 0.147059 0.411765 0.352941 0.176471 0.000000 0.470588 0.029412 0.323529 0.117647 0.529412 0.235294 0.088235 0.000000 0.676471 0.000000 0.000000 0.147059 0.852941 0.000000 0.058824 0.000000 0.941176 0.058824 0.352941 0.147059 0.441176 0.000000 0.176471 0.117647 0.705882 0.147059 0.117647 0.205882 0.529412 0.235294 0.000000 0.088235 0.676471 0.117647 0.029412 0.117647 0.735294 0.205882 0.000000 0.058824 0.735294 0.205882 0.235294 0.176471 0.382353 0.205882 0.000000 0.029412 0.764706 0.058824 0.000000 0.000000 0.941176 0.000000 0.000000 0.000000 1.000000 0.235294 0.323529 0.294118 0.147059 0.352941 0.000000 0.117647 0.529412 0.205882 0.205882 0.205882 0.382353 0.352941 0.235294 0.117647 0.294118 Consensus sequence: TWVHWWWYTTTYTTTTTHTTTVWBH ************************************************************************ Best Matches for Motif ID 56 (Highest to Lowest) ************************************************************************ Motif ID Motif name Matching format of first motif Matching format of second motif Direction Position # # of overlap Similarity score MA0118.1 Macho-1 Reverse Complement Original Motif Forward 5 5 0.019258 Taxon: Urochordates Original motif 0.119048 0.357143 0.142857 0.380952 0.214286 0.047619 0.547619 0.190476 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.071429 0.095238 0.547619 0.285714 0.000000 0.000000 1.000000 0.000000 0.119048 0.166667 0.357143 0.357143 0.119048 0.333333 0.095238 0.452381 0.309524 0.333333 0.238095 0.119048 Consensus sequence: BGGGKGBYV Reverse complement motif 0.309524 0.238095 0.333333 0.119048 0.452381 0.333333 0.095238 0.119048 0.119048 0.357143 0.166667 0.357143 0.000000 1.000000 0.000000 0.000000 0.071429 0.547619 0.095238 0.285714 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.214286 0.547619 0.047619 0.190476 0.380952 0.357143 0.142857 0.119048 Consensus sequence: VMBCYCCCV Alignment: BGGGKGBYV-------------------- ----TWVHWWWYTTTYTTTTTHTTTVWBH ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Results created by MOTIFSIM on 11-21-2023 10:01:18 Runtime: 65.835603 seconds MOTIFSIM is written by Ngoc Tam L. Tran